-- dump date 20140619_113908 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 1055529000001 SEQ_END SEQ_END NC_017379.1 1646139 1646139 DR NC_017379.1; contig end 1646139..1646139 Helicobacter pylori Puno135 YP_005789232.1 CDS nusB NC_017379.1 11 427 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(11..427) Helicobacter pylori Puno135 12370784 YP_005789233.1 CDS ribH NC_017379.1 429 899 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(429..899) Helicobacter pylori Puno135 12370786 YP_005789234.1 CDS HPPN135_00015 NC_017379.1 909 1739 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(909..1739) Helicobacter pylori Puno135 12370788 YP_005789235.1 CDS HPPN135_00020 NC_017379.1 1726 2391 R COG0288 Carbonic anhydrase; carbonic anhydrase complement(1726..2391) Helicobacter pylori Puno135 12370790 YP_005789236.1 CDS HPPN135_00025 NC_017379.1 2514 3197 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2514..3197 Helicobacter pylori Puno135 12370798 YP_005789237.1 CDS panC NC_017379.1 3198 4028 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 3198..4028 Helicobacter pylori Puno135 12370800 YP_005789238.1 CDS HPPN135_00035 NC_017379.1 5070 6959 R outer membrane protein complement(5070..6959) Helicobacter pylori Puno135 12369568 YP_005789239.1 CDS HPPN135_00040 NC_017379.1 7191 7292 D hypothetical protein 7191..7292 Helicobacter pylori Puno135 12369569 YP_005789240.1 CDS groEL NC_017379.1 7358 8998 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(7358..8998) Helicobacter pylori Puno135 12369570 YP_005789241.1 CDS groES NC_017379.1 9023 9379 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(9023..9379) Helicobacter pylori Puno135 12369571 YP_005789242.1 CDS dnaG NC_017379.1 9665 11344 D COG0358 DNA primase (bacterial type); DNA primase 9665..11344 Helicobacter pylori Puno135 12369572 YP_005789243.1 CDS HPPN135_00060 NC_017379.1 11341 12393 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; argininosuccinate synthase 11341..12393 Helicobacter pylori Puno135 12369573 YP_005789244.1 CDS HPPN135_00065 NC_017379.1 12390 12500 D hypothetical protein 12390..12500 Helicobacter pylori Puno135 12369574 YP_005789245.1 CDS HPPN135_00070 NC_017379.1 12485 13312 D hypothetical protein 12485..13312 Helicobacter pylori Puno135 12369575 YP_005789246.1 CDS HPPN135_00075 NC_017379.1 13458 13739 D ComB2 competence protein 13458..13739 Helicobacter pylori Puno135 12369576 YP_005789247.1 CDS HPPN135_00080 NC_017379.1 13739 14002 D hypothetical protein 13739..14002 Helicobacter pylori Puno135 12369577 YP_005789248.1 CDS HPPN135_00085 NC_017379.1 14004 16367 D COG3451 Type IV secretory pathway, VirB4 components; hypothetical protein 14004..16367 Helicobacter pylori Puno135 12369578 YP_005789249.1 CDS HPPN135_00090 NC_017379.1 16687 18027 D COG3014 Uncharacterized protein conserved in bacteria; hypothetical protein 16687..18027 Helicobacter pylori Puno135 12369579 YP_005789250.1 CDS HPPN135_00095 NC_017379.1 18122 19087 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein (cheV) 18122..19087 Helicobacter pylori Puno135 12369580 YP_005789251.1 CDS HPPN135_00100 NC_017379.1 19084 20301 D COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 19084..20301 Helicobacter pylori Puno135 12369581 YP_005789252.1 CDS HPPN135_00105 NC_017379.1 20311 20883 R COG0671 Membrane-associated phospholipid phosphatase; lipid A 1-phosphatase complement(20311..20883) Helicobacter pylori Puno135 12369582 YP_005789253.1 CDS HPPN135_00110 NC_017379.1 20894 22459 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; lipid A phosphoethanolamine transferase complement(20894..22459) Helicobacter pylori Puno135 12369583 YP_005789254.1 CDS HPPN135_00115 NC_017379.1 22786 24843 R outer membrane protein HopD complement(22786..24843) Helicobacter pylori Puno135 12369584 YP_005789255.1 CDS HPPN135_00120 NC_017379.1 25149 25289 R hypothetical protein complement(25149..25289) Helicobacter pylori Puno135 12369585 YP_005789256.1 CDS gltA NC_017379.1 25365 26645 R COG0372 Citrate synthase; type II citrate synthase complement(25365..26645) Helicobacter pylori Puno135 12369586 YP_005789257.1 CDS HPPN135_00130 NC_017379.1 26840 28117 D COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 26840..28117 Helicobacter pylori Puno135 12369587 YP_005789258.1 CDS HPPN135_00135 NC_017379.1 28189 28716 D hypothetical protein 28189..28716 Helicobacter pylori Puno135 12369588 YP_005789259.1 CDS HPPN135_00140 NC_017379.1 28693 29349 R COG0132 Dethiobiotin synthetase; dethiobiotin synthetase complement(28693..29349) Helicobacter pylori Puno135 12369589 YP_005789260.1 CDS HPPN135_00145 NC_017379.1 29353 29646 R hypothetical protein complement(29353..29646) Helicobacter pylori Puno135 12369590 YP_005789261.1 CDS HPPN135_00150 NC_017379.1 29834 30247 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; putative universal stress global response regulator UspA 29834..30247 Helicobacter pylori Puno135 12369591 YP_005789262.1 CDS HPPN135_00155 NC_017379.1 30262 30537 D COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adapter protein ClpS 30262..30537 Helicobacter pylori Puno135 12369592 YP_005789263.1 CDS HPPN135_00160 NC_017379.1 30537 32759 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent C1p protease (clpA) 30537..32759 Helicobacter pylori Puno135 12369593 YP_005789264.1 CDS HPPN135_00165 NC_017379.1 32749 33099 D COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 32749..33099 Helicobacter pylori Puno135 12369594 YP_005789265.1 CDS HPPN135_00170 NC_017379.1 33110 33403 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 33110..33403 Helicobacter pylori Puno135 12369595 YP_005789266.1 CDS HPPN135_00175 NC_017379.1 33403 34410 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; hypothetical protein 33403..34410 Helicobacter pylori Puno135 12369596 YP_005789267.1 CDS HPPN135_00180 NC_017379.1 34418 35473 D NADH-ubiquinone oxidoreductase subunit 34418..35473 Helicobacter pylori Puno135 12369597 YP_005789268.1 CDS HPPN135_00185 NC_017379.1 35490 35603 D comB7 putative lipoprotein 35490..35603 Helicobacter pylori Puno135 12369598 YP_005789269.1 CDS HPPN135_00190 NC_017379.1 35600 36343 D COG3736 Type IV secretory pathway, component VirB8; comB8 competence protein 35600..36343 Helicobacter pylori Puno135 12369599 YP_005789270.1 CDS HPPN135_00195 NC_017379.1 36343 37305 D COG3504 Type IV secretory pathway, VirB9 components; comB9 competence protein 36343..37305 Helicobacter pylori Puno135 12369600 YP_005789271.1 CDS HPPN135_00200 NC_017379.1 37298 38434 D COG2948 Type IV secretory pathway, VirB10 components; comB10 competence protein 37298..38434 Helicobacter pylori Puno135 12369601 YP_005789272.1 CDS HPPN135_00205 NC_017379.1 38504 39916 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 38504..39916 Helicobacter pylori Puno135 12369602 YP_005789273.1 CDS HPPN135_00210 NC_017379.1 39931 41076 D COG1089 GDP-D-mannose dehydratase; GDP-D-mannose dehydratase 39931..41076 Helicobacter pylori Puno135 12369603 YP_005789274.1 CDS HPPN135_00215 NC_017379.1 41069 42001 D COG0451 Nucleoside-diphosphate-sugar epimerases; nodulation protein (nolK) 41069..42001 Helicobacter pylori Puno135 12369604 YP_005789275.1 CDS HPPN135_00220 NC_017379.1 42076 42174 R hypothetical protein complement(42076..42174) Helicobacter pylori Puno135 12369605 YP_005789276.1 CDS HPPN135_00225 NC_017379.1 42298 43296 R COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein complement(42298..43296) Helicobacter pylori Puno135 12369606 YP_005789277.1 CDS HPPN135_00230 NC_017379.1 43299 45551 R COG0068 Hydrogenase maturation factor; transcriptional regulator (hypF) complement(43299..45551) Helicobacter pylori Puno135 12369607 YP_005789278.1 CDS HPPN135_00235 NC_017379.1 45548 46540 R COG2957 Peptidylarginine deiminase and related enzymes; hypothetical protein complement(45548..46540) Helicobacter pylori Puno135 12369608 YP_005789279.1 CDS HPPN135_00240 NC_017379.1 46591 47289 R COG0863 DNA modification methylase; adenine specific DNA methyltransferase (dpnA) complement(46591..47289) Helicobacter pylori Puno135 12369609 YP_005789280.1 CDS HPPN135_00245 NC_017379.1 47286 48353 R COG0270 Site-specific DNA methylase; cytosine specific DNA methyltransferase complement(47286..48353) Helicobacter pylori Puno135 12369610 YP_005789281.1 CDS HPPN135_00250 NC_017379.1 48350 49576 R hypothetical protein complement(48350..49576) Helicobacter pylori Puno135 12369611 YP_005789282.1 CDS HPPN135_00255 NC_017379.1 50021 51061 R COG2189 Adenine specific DNA methylase Mod; putative type II DNA modification enzyme (methyltransferase) complement(50021..51061) Helicobacter pylori Puno135 12369612 YP_005789283.1 CDS HPPN135_00260 NC_017379.1 51062 51487 R type II restriction enzyme complement(51062..51487) Helicobacter pylori Puno135 12369613 YP_005789284.1 CDS HPPN135_00265 NC_017379.1 51714 51818 R putative type II DNA modification enzyme (methyltransferase) complement(51714..51818) Helicobacter pylori Puno135 12369614 YP_005789285.1 CDS HPPN135_00270 NC_017379.1 51926 52060 R adenine/cytosine DNA methyltransferase complement(51926..52060) Helicobacter pylori Puno135 12369615 YP_005789286.1 CDS HPPN135_00275 NC_017379.1 52041 53540 R COG0591 Na+/proline symporter; proline permease (putP) complement(52041..53540) Helicobacter pylori Puno135 12369616 YP_005789287.1 CDS HPPN135_00280 NC_017379.1 53567 57124 R COG0506 Proline dehydrogenase; Proline/pyrroline-5-carboxylate dehydrogenase complement(53567..57124) Helicobacter pylori Puno135 12369617 YP_005789288.1 CDS HPPN135_00285 NC_017379.1 57452 57655 D hypothetical protein 57452..57655 Helicobacter pylori Puno135 12369618 YP_005789289.1 CDS HPPN135_00290 NC_017379.1 57767 58864 D hypothetical protein 57767..58864 Helicobacter pylori Puno135 12369619 YP_005789290.1 CDS HPPN135_00295 NC_017379.1 58866 59675 D hypothetical protein 58866..59675 Helicobacter pylori Puno135 12369620 YP_005789291.1 CDS HPPN135_00300 NC_017379.1 59687 62125 D hypothetical protein 59687..62125 Helicobacter pylori Puno135 12369621 YP_005789292.1 CDS HPPN135_00305 NC_017379.1 62122 62691 D hypothetical protein 62122..62691 Helicobacter pylori Puno135 12369622 YP_005789293.1 CDS HPPN135_00310 NC_017379.1 62707 62967 D hypothetical protein 62707..62967 Helicobacter pylori Puno135 12369623 YP_005789294.1 CDS HPPN135_00315 NC_017379.1 62977 64152 D COG1241 Predicted ATPase involved in replication control, Cdc46/Mcm family; hypothetical protein 62977..64152 Helicobacter pylori Puno135 12369624 YP_005789295.1 CDS HPPN135_00320 NC_017379.1 64265 64345 D hypothetical protein 64265..64345 Helicobacter pylori Puno135 12369625 YP_005789296.1 CDS HPPN135_00325 NC_017379.1 64315 64740 D hypothetical protein 64315..64740 Helicobacter pylori Puno135 12369626 YP_005789297.1 CDS HPPN135_00330 NC_017379.1 64742 65092 D hypothetical protein 64742..65092 Helicobacter pylori Puno135 12369627 YP_005789298.1 CDS HPPN135_00335 NC_017379.1 65089 67515 D COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; ATP-binding protein 65089..67515 Helicobacter pylori Puno135 12369628 YP_005789299.1 CDS HPPN135_00340 NC_017379.1 67586 68383 R COG0829 Urease accessory protein UreH; urease accessory protein UreH complement(67586..68383) Helicobacter pylori Puno135 12369629 YP_005789300.1 CDS HPPN135_00345 NC_017379.1 68383 68982 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein complement(68383..68982) Helicobacter pylori Puno135 12369630 YP_005789301.1 CDS HPPN135_00350 NC_017379.1 69011 69757 R COG0830 Urease accessory protein UreF; urease accessory protein UreF complement(69011..69757) Helicobacter pylori Puno135 12369631 YP_005789302.1 CDS ureE NC_017379.1 69791 70303 R COG2371 Urease accessory protein UreE; urease accessory protein UreE complement(69791..70303) Helicobacter pylori Puno135 12369632 YP_005789303.1 CDS HPPN135_00360 NC_017379.1 70305 70892 R COG1138 Cytochrome c biogenesis factor; urease accessory protein UreI complement(70305..70892) Helicobacter pylori Puno135 12369633 YP_005789304.1 CDS ureB NC_017379.1 71086 72795 R COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta complement(71086..72795) Helicobacter pylori Puno135 12369634 YP_005789305.1 CDS HPPN135_00370 NC_017379.1 72799 73515 R COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha complement(72799..73515) Helicobacter pylori Puno135 12369635 YP_005789306.1 CDS lspA NC_017379.1 73875 74348 R COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase complement(73875..74348) Helicobacter pylori Puno135 12369637 YP_005789307.1 CDS glmM NC_017379.1 74342 75679 R COG1109 Phosphomannomutase; phosphoglucosamine mutase complement(74342..75679) Helicobacter pylori Puno135 12369638 YP_005789308.1 CDS rpsT NC_017379.1 75769 76038 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 75769..76038 Helicobacter pylori Puno135 12369639 YP_005789309.1 CDS prfA NC_017379.1 76154 77212 D COG0216 Protein chain release factor A; peptide chain release factor 1 76154..77212 Helicobacter pylori Puno135 12369640 YP_005789310.1 CDS HPPN135_00395 NC_017379.1 77231 77338 R hypothetical protein complement(77231..77338) Helicobacter pylori Puno135 12369641 YP_005789311.1 CDS HPPN135_00400 NC_017379.1 77621 78451 D outer membrane protein 77621..78451 Helicobacter pylori Puno135 12369642 YP_005789312.1 CDS HPPN135_00405 NC_017379.1 78706 80478 D hypothetical protein 78706..80478 Helicobacter pylori Puno135 12369643 YP_005789313.1 CDS HPPN135_00410 NC_017379.1 80768 80899 D hypothetical protein 80768..80899 Helicobacter pylori Puno135 12369644 YP_005789314.1 CDS HPPN135_00415 NC_017379.1 80903 82924 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transducer (tlpC) complement(80903..82924) Helicobacter pylori Puno135 12369645 YP_005789315.1 CDS rpsI NC_017379.1 83076 83465 R COG0103 Ribosomal protein S9; 30S ribosomal protein S9 complement(83076..83465) Helicobacter pylori Puno135 12369646 YP_005789316.1 CDS rplM NC_017379.1 83462 83887 R COG0102 Ribosomal protein L13; 50S ribosomal protein L13 complement(83462..83887) Helicobacter pylori Puno135 12369647 YP_005789317.1 CDS HPPN135_00430 NC_017379.1 84181 84369 R hypothetical protein complement(84181..84369) Helicobacter pylori Puno135 12369648 YP_005789318.1 CDS HPPN135_00435 NC_017379.1 84376 85728 R COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase complement(84376..85728) Helicobacter pylori Puno135 12369649 YP_005789319.1 CDS HPPN135_00440 NC_017379.1 85782 87155 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein complement(85782..87155) Helicobacter pylori Puno135 12369650 YP_005789320.1 CDS HPPN135_00445 NC_017379.1 87176 89194 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(87176..89194) Helicobacter pylori Puno135 12369651 YP_005789321.1 CDS HPPN135_00450 NC_017379.1 89386 90081 R COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(89386..90081) Helicobacter pylori Puno135 12369652 YP_005789322.1 CDS HPPN135_00455 NC_017379.1 90092 91021 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(90092..91021) Helicobacter pylori Puno135 12369653 YP_005789323.1 CDS HPPN135_00465 NC_017379.1 91447 92280 D HsdR; COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; type II restriction enzyme R protein 91447..92280 Helicobacter pylori Puno135 12369655 YP_005789324.1 CDS HPPN135_00470 NC_017379.1 92274 93107 D HsdR; COG0863 DNA modification methylase; type II restriction enzyme M protein 92274..93107 Helicobacter pylori Puno135 12369656 YP_005789325.1 CDS HPPN135_00485 NC_017379.1 94119 94649 R hypothetical protein complement(94119..94649) Helicobacter pylori Puno135 12369657 YP_005789326.1 CDS HPPN135_00490 NC_017379.1 94722 95666 D COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 94722..95666 Helicobacter pylori Puno135 12369658 YP_005789327.1 CDS HPPN135_00495 NC_017379.1 95997 96710 R hypothetical protein complement(95997..96710) Helicobacter pylori Puno135 12369659 YP_005789328.1 CDS HPPN135_00500 NC_017379.1 96816 98276 R COG0498 Threonine synthase; threonine synthase complement(96816..98276) Helicobacter pylori Puno135 12369660 YP_005789329.1 CDS HPPN135_00505 NC_017379.1 98481 100508 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein (tlpA) 98481..100508 Helicobacter pylori Puno135 12369661 YP_005789330.1 CDS HPPN135_00510 NC_017379.1 100508 101614 D COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein 100508..101614 Helicobacter pylori Puno135 12369662 YP_005789331.1 CDS HPPN135_00515 NC_017379.1 101730 102491 D hypothetical protein 101730..102491 Helicobacter pylori Puno135 12369663 YP_005789332.1 CDS HPPN135_00520 NC_017379.1 102474 103256 R COG0463 Glycosyltransferases involved in cell wall biogenesis; hypothetical protein complement(102474..103256) Helicobacter pylori Puno135 12369664 YP_005789333.1 CDS HPPN135_00525 NC_017379.1 103287 104984 R COG0840 Methyl-accepting chemotaxis protein; Methyl-accepting chemotaxis protein tlpB; putative signal peptide complement(103287..104984) Helicobacter pylori Puno135 12369665 YP_005789334.1 CDS HPPN135_00530 NC_017379.1 105169 106914 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(105169..106914) Helicobacter pylori Puno135 12369666 YP_005789335.1 CDS HPPN135_00535 NC_017379.1 107051 107509 R COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase complement(107051..107509) Helicobacter pylori Puno135 12369667 YP_005789336.1 CDS HPPN135_00540 NC_017379.1 107547 108689 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase complement(107547..108689) Helicobacter pylori Puno135 12369668 YP_005789337.1 CDS HPPN135_00545 NC_017379.1 108710 109627 R COG0031 Cysteine synthase; cysteine synthase B complement(108710..109627) Helicobacter pylori Puno135 12369669 YP_005789338.1 CDS HPPN135_00550 NC_017379.1 109730 109912 D hypothetical protein 109730..109912 Helicobacter pylori Puno135 12369670 YP_005789339.1 CDS dnaK NC_017379.1 110054 111916 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(110054..111916) Helicobacter pylori Puno135 12369671 YP_005789340.1 CDS HPPN135_00560 NC_017379.1 111947 112522 R COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE complement(111947..112522) Helicobacter pylori Puno135 12369672 YP_005789341.1 CDS HPPN135_00565 NC_017379.1 112522 113352 R COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor complement(112522..113352) Helicobacter pylori Puno135 12369673 YP_005789342.1 CDS HPPN135_00570 NC_017379.1 113572 114210 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 113572..114210 Helicobacter pylori Puno135 12369674 YP_005789343.1 CDS HPPN135_00575 NC_017379.1 114231 114527 D hypothetical protein 114231..114527 Helicobacter pylori Puno135 12369675 YP_005789344.1 CDS HPPN135_00580 NC_017379.1 114538 116421 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(114538..116421) Helicobacter pylori Puno135 12369676 YP_005789345.1 CDS HPPN135_00585 NC_017379.1 116484 118028 R COG1344 Flagellin and related hook-associated proteins; flagellin B complement(116484..118028) Helicobacter pylori Puno135 12369677 YP_005789346.1 CDS HPPN135_00590 NC_017379.1 118194 120404 D COG0550 Topoisomerase IA; DNA topoisomerase I 118194..120404 Helicobacter pylori Puno135 12369678 YP_005789347.1 CDS HPPN135_00595 NC_017379.1 120397 121323 D COG0731 Fe-S oxidoreductases; hypothetical protein 120397..121323 Helicobacter pylori Puno135 12369679 YP_005789348.1 CDS HPPN135_00600 NC_017379.1 121466 122542 R hypothetical protein complement(121466..122542) Helicobacter pylori Puno135 12369680 YP_005789349.1 CDS HPPN135_00605 NC_017379.1 122653 125079 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase complement(122653..125079) Helicobacter pylori Puno135 12369681 YP_005789350.1 CDS HPPN135_00610 NC_017379.1 125285 125398 D hypothetical protein 125285..125398 Helicobacter pylori Puno135 12369682 YP_005789351.1 CDS thrS NC_017379.1 125439 127277 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 125439..127277 Helicobacter pylori Puno135 12369683 YP_005789352.1 CDS infC NC_017379.1 127274 127885 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 127274..127885 Helicobacter pylori Puno135 12369684 YP_005789353.1 CDS rpmI NC_017379.1 127866 128060 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 127866..128060 Helicobacter pylori Puno135 12369685 YP_005789354.1 CDS rplT NC_017379.1 128155 128505 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 128155..128505 Helicobacter pylori Puno135 12369686 YP_005789355.1 CDS HPPN135_00635 NC_017379.1 128705 129565 D hypothetical protein 128705..129565 Helicobacter pylori Puno135 12369687 YP_005789356.1 CDS HPPN135_00640 NC_017379.1 129920 130351 D hypothetical protein 129920..130351 Helicobacter pylori Puno135 12369688 YP_005789357.1 CDS HPPN135_00645 NC_017379.1 130753 131622 D hypothetical protein 130753..131622 Helicobacter pylori Puno135 12369689 YP_005789358.1 CDS HPPN135_00650 NC_017379.1 132242 133609 R COG1760 L-serine deaminase; L-serine deaminase complement(132242..133609) Helicobacter pylori Puno135 12369690 YP_005789359.1 CDS HPPN135_00655 NC_017379.1 133609 134850 R COG0814 Amino acid permeases; hypothetical protein complement(133609..134850) Helicobacter pylori Puno135 12369691 YP_005789360.1 CDS HPPN135_00660 NC_017379.1 134913 135005 D hypothetical protein 134913..135005 Helicobacter pylori Puno135 12369692 YP_005789361.1 CDS HPPN135_00665 NC_017379.1 135033 136382 D COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 135033..136382 Helicobacter pylori Puno135 12369693 YP_005789362.1 CDS HPPN135_00670 NC_017379.1 136465 136599 D hypothetical protein 136465..136599 Helicobacter pylori Puno135 12369694 YP_005789363.1 CDS HPPN135_00675 NC_017379.1 136701 136820 D hypothetical protein 136701..136820 Helicobacter pylori Puno135 12369695 YP_005789364.1 CDS HPPN135_00680 NC_017379.1 136829 137287 R COG1225 Peroxiredoxin; bacterioferritin comigratory protein complement(136829..137287) Helicobacter pylori Puno135 12369696 YP_005789365.1 CDS HPPN135_00685 NC_017379.1 137297 137932 R COG1556 Uncharacterized conserved protein; hypothetical protein complement(137297..137932) Helicobacter pylori Puno135 12369697 YP_005789366.1 CDS HPPN135_00690 NC_017379.1 137925 139370 R COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; iron-sulfur cluster binding protein complement(137925..139370) Helicobacter pylori Puno135 12369698 YP_005789367.1 CDS HPPN135_00695 NC_017379.1 139399 140127 R COG0247 Fe-S oxidoreductase; hypothetical protein complement(139399..140127) Helicobacter pylori Puno135 12369699 YP_005789368.1 CDS HPPN135_00700 NC_017379.1 140348 141994 D COG1620 L-lactate permease; L-lactate permease 140348..141994 Helicobacter pylori Puno135 12369700 YP_005789369.1 CDS HPPN135_00705 NC_017379.1 142054 143709 D COG1620 L-lactate permease; L-lactate permease (lctP) 142054..143709 Helicobacter pylori Puno135 12369701 YP_005789370.1 CDS HPPN135_00710 NC_017379.1 143733 144602 R COG1194 A/G-specific DNA glycosylase; DNA glycosylase MutY complement(143733..144602) Helicobacter pylori Puno135 12369702 YP_005789371.1 CDS HPPN135_00715 NC_017379.1 144720 146168 R COG0471 Di- and tricarboxylate transporters; C(4)-dicarboxylates and tricarboxylates/succinate antiporter complement(144720..146168) Helicobacter pylori Puno135 12369703 YP_005789372.1 CDS HPPN135_00720 NC_017379.1 146338 147804 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 146338..147804 Helicobacter pylori Puno135 12369704 YP_005789373.1 CDS HPPN135_00725 NC_017379.1 147817 148515 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 147817..148515 Helicobacter pylori Puno135 12369705 YP_005789374.1 CDS HPPN135_00730 NC_017379.1 148526 148744 D cytochrome c oxidase, cbb3-type, CcoQ subunit 148526..148744 Helicobacter pylori Puno135 12369706 YP_005789375.1 CDS HPPN135_00735 NC_017379.1 148746 149624 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c oxidase, cbb3-type subunit III 148746..149624 Helicobacter pylori Puno135 12369707 YP_005789376.1 CDS HPPN135_00740 NC_017379.1 149635 149841 D hypothetical protein 149635..149841 Helicobacter pylori Puno135 12369708 YP_005789377.1 CDS HPPN135_00745 NC_017379.1 149838 149945 D hypothetical protein 149838..149945 Helicobacter pylori Puno135 12369709 YP_005789378.1 CDS HPPN135_00750 NC_017379.1 149981 150526 D COG0443 Molecular chaperone; hypothetical protein 149981..150526 Helicobacter pylori Puno135 12369710 YP_005789379.1 CDS HPPN135_00755 NC_017379.1 150538 151119 D hypothetical protein 150538..151119 Helicobacter pylori Puno135 12369711 YP_005789380.1 CDS HPPN135_00760 NC_017379.1 151207 151974 D hypothetical protein 151207..151974 Helicobacter pylori Puno135 12369712 YP_005789381.1 CDS HPPN135_00765 NC_017379.1 151971 152834 R COG2107 Predicted periplasmic solute-binding protein; hypothetical protein complement(151971..152834) Helicobacter pylori Puno135 12369713 YP_005789382.1 CDS recA NC_017379.1 152933 153976 D COG0468 RecA/RadA recombinase; recombinase A 152933..153976 Helicobacter pylori Puno135 12369714 YP_005789383.1 CDS eno NC_017379.1 153988 155268 D COG0148 Enolase; enolase 153988..155268 Helicobacter pylori Puno135 12369715 YP_005789384.1 CDS HPPN135_00780 NC_017379.1 155261 155536 D hypothetical protein 155261..155536 Helicobacter pylori Puno135 12369716 YP_005789385.1 CDS HPPN135_00785 NC_017379.1 155552 156148 D hypothetical protein 155552..156148 Helicobacter pylori Puno135 12369717 YP_005789386.1 CDS aroK NC_017379.1 156153 156641 D COG0703 Shikimate kinase; shikimate kinase 156153..156641 Helicobacter pylori Puno135 12369718 YP_005789387.1 CDS HPPN135_00795 NC_017379.1 156663 157619 D general glycosylation pathway protein 156663..157619 Helicobacter pylori Puno135 12369719 YP_005789388.1 CDS HPPN135_00800 NC_017379.1 157616 158734 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(157616..158734) Helicobacter pylori Puno135 12369720 YP_005789389.1 CDS HPPN135_00805 NC_017379.1 158886 159803 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 158886..159803 Helicobacter pylori Puno135 12369721 YP_005789390.1 CDS HPPN135_00810 NC_017379.1 160570 161292 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(160570..161292) Helicobacter pylori Puno135 12369722 YP_005789391.1 CDS HPPN135_00815 NC_017379.1 161293 162264 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(161293..162264) Helicobacter pylori Puno135 12369723 YP_005789392.1 CDS HPPN135_00820 NC_017379.1 162287 163618 R COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein complement(162287..163618) Helicobacter pylori Puno135 12369724 YP_005789393.1 CDS HPPN135_00825 NC_017379.1 163644 164321 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator complement(163644..164321) Helicobacter pylori Puno135 12369725 YP_005789394.1 CDS HPPN135_00830 NC_017379.1 164555 165019 R hypothetical protein complement(164555..165019) Helicobacter pylori Puno135 12369726 YP_005789395.1 CDS HPPN135_00835 NC_017379.1 165010 165273 R COG0457 FOG: TPR repeat; hypothetical protein complement(165010..165273) Helicobacter pylori Puno135 12369727 YP_005789396.1 CDS HPPN135_00840 NC_017379.1 165299 166585 R COG0826 Collagenase and related proteases; collagenase complement(165299..166585) Helicobacter pylori Puno135 12369728 YP_005789397.1 CDS HPPN135_00845 NC_017379.1 166588 167307 R COG0840 Methyl-accepting chemotaxis protein; hypothetical protein complement(166588..167307) Helicobacter pylori Puno135 12369729 YP_005789398.1 CDS prfB NC_017379.1 167382 168473 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(167382..168473) Helicobacter pylori Puno135 12369730 YP_005789399.1 CDS HPPN135_00855 NC_017379.1 168534 169709 R COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein complement(168534..169709) Helicobacter pylori Puno135 12369731 YP_005789400.1 CDS fliR NC_017379.1 169719 170486 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(169719..170486) Helicobacter pylori Puno135 12369732 YP_005789401.1 CDS HPPN135_00865 NC_017379.1 170480 171208 R COG2101 TATA-box binding protein (TBP), component of TFIID and TFIIIB; hypothetical protein complement(170480..171208) Helicobacter pylori Puno135 12369733 YP_005789402.1 CDS HPPN135_00870 NC_017379.1 171579 172478 D COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C 171579..172478 Helicobacter pylori Puno135 12369734 YP_005789403.1 CDS HPPN135_00875 NC_017379.1 172495 173418 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 172495..173418 Helicobacter pylori Puno135 12369735 YP_005789404.1 CDS HPPN135_00880 NC_017379.1 173440 174003 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 173440..174003 Helicobacter pylori Puno135 12369736 YP_005789405.1 CDS HPPN135_00885 NC_017379.1 174224 174340 D hypothetical protein 174224..174340 Helicobacter pylori Puno135 12369737 YP_005789406.1 CDS HPPN135_00890 NC_017379.1 174539 175561 R COG2089 Sialic acid synthase; sialic acid synthase complement(174539..175561) Helicobacter pylori Puno135 12369738 YP_005789407.1 CDS HPPN135_00895 NC_017379.1 175565 176206 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein complement(175565..176206) Helicobacter pylori Puno135 12369739 YP_005789408.1 CDS HPPN135_00900 NC_017379.1 176206 177480 R COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(176206..177480) Helicobacter pylori Puno135 12369740 YP_005789409.1 CDS HPPN135_00905 NC_017379.1 177620 177733 D hypothetical protein 177620..177733 Helicobacter pylori Puno135 12369741 YP_005789410.1 CDS HPPN135_00910 NC_017379.1 177730 178431 D COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 177730..178431 Helicobacter pylori Puno135 12369742 YP_005789411.1 CDS lysS NC_017379.1 178441 179946 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 178441..179946 Helicobacter pylori Puno135 12369743 YP_005789412.1 CDS HPPN135_00920 NC_017379.1 179946 181196 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 179946..181196 Helicobacter pylori Puno135 12369744 YP_005789413.1 CDS HPPN135_00925 NC_017379.1 181207 181749 D hypothetical protein 181207..181749 Helicobacter pylori Puno135 12369745 YP_005789414.1 CDS HPPN135_00930 NC_017379.1 181771 182580 D hypothetical protein 181771..182580 Helicobacter pylori Puno135 12369746 YP_005789415.1 CDS HPPN135_00935 NC_017379.1 182819 182968 D hypothetical protein 182819..182968 Helicobacter pylori Puno135 12369747 YP_005789416.1 CDS HPPN135_00955 NC_017379.1 184831 185364 D COG2862 Predicted membrane protein; hypothetical protein 184831..185364 Helicobacter pylori Puno135 12369748 YP_005789417.1 CDS HPPN135_00960 NC_017379.1 185370 186878 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; hypothetical protein complement(185370..186878) Helicobacter pylori Puno135 12369749 YP_005789418.1 CDS frdB NC_017379.1 186900 187637 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit complement(186900..187637) Helicobacter pylori Puno135 12369750 YP_005789419.1 CDS HPPN135_00970 NC_017379.1 187630 189774 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit complement(187630..189774) Helicobacter pylori Puno135 12369751 YP_005789420.1 CDS HPPN135_00975 NC_017379.1 189784 190551 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; fumarate reductase cytochrome b-556 subunit complement(189784..190551) Helicobacter pylori Puno135 12369752 YP_005789421.1 CDS tpiA NC_017379.1 190765 191469 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 190765..191469 Helicobacter pylori Puno135 12369753 YP_005789422.1 CDS HPPN135_00985 NC_017379.1 191479 192306 D COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 191479..192306 Helicobacter pylori Puno135 12369754 YP_005789423.1 CDS lpxD NC_017379.1 192316 193326 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 192316..193326 Helicobacter pylori Puno135 12369755 YP_005789424.1 CDS HPPN135_00995 NC_017379.1 193391 194548 D COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 193391..194548 Helicobacter pylori Puno135 12369756 YP_005789425.1 CDS ndk NC_017379.1 194615 195028 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 194615..195028 Helicobacter pylori Puno135 12369757 YP_005789426.1 CDS HPPN135_01005 NC_017379.1 195053 195409 D hypothetical protein 195053..195409 Helicobacter pylori Puno135 12369758 YP_005789427.1 CDS rpmF NC_017379.1 195425 195571 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 195425..195571 Helicobacter pylori Puno135 12369759 YP_005789428.1 CDS HPPN135_01015 NC_017379.1 195639 196658 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative phosphate acyltransferase 195639..196658 Helicobacter pylori Puno135 12369760 YP_005789429.1 CDS HPPN135_01020 NC_017379.1 196683 197678 D COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 196683..197678 Helicobacter pylori Puno135 12369761 YP_005789430.1 CDS HPPN135_01025 NC_017379.1 197702 198004 D hypothetical protein 197702..198004 Helicobacter pylori Puno135 12369762 YP_005789431.1 CDS HPPN135_01030 NC_017379.1 198299 198682 R hypothetical protein complement(198299..198682) Helicobacter pylori Puno135 12369763 YP_005789432.1 CDS HPPN135_01045 NC_017379.1 201706 202812 D COG0489 ATPases involved in chromosome partitioning; ATP-binding protein 201706..202812 Helicobacter pylori Puno135 12369764 YP_005789433.1 CDS HPPN135_01050 NC_017379.1 202826 203845 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glycosyltransferase complement(202826..203845) Helicobacter pylori Puno135 12369765 YP_005789434.1 CDS HPPN135_01055 NC_017379.1 203856 203978 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; LPS 1,2-glycosyltransferase complement(203856..203978) Helicobacter pylori Puno135 12369766 YP_005789435.1 CDS HPPN135_01060 NC_017379.1 204141 205493 D hypothetical protein 204141..205493 Helicobacter pylori Puno135 12369767 YP_005789436.1 CDS HPPN135_01065 NC_017379.1 205597 207462 D COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 205597..207462 Helicobacter pylori Puno135 12369768 YP_005789437.1 CDS HPPN135_01070 NC_017379.1 207485 207628 D hypothetical protein 207485..207628 Helicobacter pylori Puno135 12369769 YP_005789438.1 CDS HPPN135_01075 NC_017379.1 207658 208410 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(207658..208410) Helicobacter pylori Puno135 12369770 YP_005789439.1 CDS HPPN135_01080 NC_017379.1 208610 208792 D hypothetical protein 208610..208792 Helicobacter pylori Puno135 12369771 YP_005789440.1 CDS HPPN135_01085 NC_017379.1 208862 210028 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(208862..210028) Helicobacter pylori Puno135 12369772 YP_005789441.1 CDS HPPN135_01090 NC_017379.1 210039 211904 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(210039..211904) Helicobacter pylori Puno135 12369773 YP_005789442.1 CDS HPPN135_01095 NC_017379.1 212000 213658 D COG0471 Di- and tricarboxylate transporters; sodium-dependent transporter 212000..213658 Helicobacter pylori Puno135 12369774 YP_005789443.1 CDS HPPN135_01100 NC_017379.1 213671 214471 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 213671..214471 Helicobacter pylori Puno135 12369775 YP_005789444.1 CDS HPPN135_01105 NC_017379.1 214472 215578 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 214472..215578 Helicobacter pylori Puno135 12369776 YP_005789445.1 CDS HPPN135_01110 NC_017379.1 215629 215934 D hypothetical protein 215629..215934 Helicobacter pylori Puno135 12369777 YP_005789446.1 CDS HPPN135_01115 NC_017379.1 215909 216769 D hypothetical protein 215909..216769 Helicobacter pylori Puno135 12369778 YP_005789447.1 CDS HPPN135_01120 NC_017379.1 216785 217336 R COG1881 Phospholipid-binding protein; hypothetical protein complement(216785..217336) Helicobacter pylori Puno135 12369779 YP_005789448.1 CDS HPPN135_01125 NC_017379.1 217480 217941 D hypothetical protein 217480..217941 Helicobacter pylori Puno135 12369780 YP_005789449.1 CDS HPPN135_01130 NC_017379.1 218115 219278 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 218115..219278 Helicobacter pylori Puno135 12369781 YP_005789450.1 CDS HPPN135_01135 NC_017379.1 219300 220280 D COG0822 NifU homolog involved in Fe-S cluster formation; nifU-like protein 219300..220280 Helicobacter pylori Puno135 12369782 YP_005789451.1 CDS HPPN135_01140 NC_017379.1 220437 220670 D hypothetical protein 220437..220670 Helicobacter pylori Puno135 12369783 YP_005789452.1 CDS HPPN135_01145 NC_017379.1 220782 222128 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 220782..222128 Helicobacter pylori Puno135 12369784 YP_005789453.1 CDS HPPN135_01150 NC_017379.1 222252 223331 D COG0225 Peptide methionine sulfoxide reductase; bifunctional methionine sulfoxide reductase A/B 222252..223331 Helicobacter pylori Puno135 12369785 YP_005789454.1 CDS HPPN135_01155 NC_017379.1 223796 224629 R COG0730 Predicted permeases; hypothetical protein complement(223796..224629) Helicobacter pylori Puno135 12369786 YP_005789455.1 CDS HPPN135_01160 NC_017379.1 224655 224849 R hypothetical protein complement(224655..224849) Helicobacter pylori Puno135 12369787 YP_005789456.1 CDS HPPN135_01165 NC_017379.1 224833 226920 R putative Outer membrane protein complement(224833..226920) Helicobacter pylori Puno135 12369788 YP_005789457.1 CDS HPPN135_01170 NC_017379.1 226859 226987 R hypothetical protein complement(226859..226987) Helicobacter pylori Puno135 12369789 YP_005789458.1 CDS HPPN135_01175 NC_017379.1 227160 228317 D COG0659 Sulfate permease and related transporters (MFS superfamily); putative sulfate permease 227160..228317 Helicobacter pylori Puno135 12369790 YP_005789459.1 CDS HPPN135_01185 NC_017379.1 228553 230001 R outer membrane protein (omp6) complement(228553..230001) Helicobacter pylori Puno135 12369792 YP_005789460.1 CDS HPPN135_01190 NC_017379.1 230193 230918 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(230193..230918) Helicobacter pylori Puno135 12369793 YP_005789461.1 CDS HPPN135_01195 NC_017379.1 231032 231829 D COG1651 Protein-disulfide isomerase; hypothetical protein 231032..231829 Helicobacter pylori Puno135 12369794 YP_005789462.1 CDS HPPN135_01200 NC_017379.1 231845 232495 D hypothetical protein 231845..232495 Helicobacter pylori Puno135 12369795 YP_005789463.1 CDS HPPN135_01205 NC_017379.1 232520 233692 D COG0754 Glutathionylspermidine synthase; hypothetical protein 232520..233692 Helicobacter pylori Puno135 12369796 YP_005789464.1 CDS HPPN135_01210 NC_017379.1 233692 234222 D hypothetical protein 233692..234222 Helicobacter pylori Puno135 12369797 YP_005789465.1 CDS HPPN135_01215 NC_017379.1 234648 235715 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(234648..235715) Helicobacter pylori Puno135 12369798 YP_005789466.1 CDS HPPN135_01220 NC_017379.1 235810 236178 R hypothetical protein complement(235810..236178) Helicobacter pylori Puno135 12369799 YP_005789467.1 CDS hemC NC_017379.1 236178 237098 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(236178..237098) Helicobacter pylori Puno135 12369800 YP_005789468.1 CDS HPPN135_01230 NC_017379.1 237109 238842 R COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(237109..238842) Helicobacter pylori Puno135 12369801 YP_005789469.1 CDS hemA NC_017379.1 238846 240195 R COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(238846..240195) Helicobacter pylori Puno135 12369802 YP_005789470.1 CDS HPPN135_01240 NC_017379.1 240195 241118 R COG0142 Geranylgeranyl pyrophosphate synthase; putative octaprenyl-diphosphate synthase complement(240195..241118) Helicobacter pylori Puno135 12369803 YP_005789471.1 CDS HPPN135_01245 NC_017379.1 241128 241523 R hypothetical protein complement(241128..241523) Helicobacter pylori Puno135 12369804 YP_005789472.1 CDS HPPN135_01250 NC_017379.1 241516 241800 R hypothetical protein complement(241516..241800) Helicobacter pylori Puno135 12369805 YP_005789473.1 CDS HPPN135_01255 NC_017379.1 241821 242255 R NapA: bacterioferritin; COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); neutrophil activating protein complement(241821..242255) Helicobacter pylori Puno135 12369806 YP_005789474.1 CDS HPPN135_01260 NC_017379.1 242463 243608 R COG0642 Signal transduction histidine kinase; histidine kinase sensor protein complement(242463..243608) Helicobacter pylori Puno135 12369807 YP_005789475.1 CDS HPPN135_01265 NC_017379.1 243605 243922 R hypothetical protein complement(243605..243922) Helicobacter pylori Puno135 12369808 YP_005789476.1 CDS flgI NC_017379.1 243919 244947 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(243919..244947) Helicobacter pylori Puno135 12369809 YP_005789477.1 CDS HPPN135_01275 NC_017379.1 245137 246615 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase 245137..246615 Helicobacter pylori Puno135 12369810 YP_005789478.1 CDS HPPN135_01280 NC_017379.1 246636 247724 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 246636..247724 Helicobacter pylori Puno135 12369811 YP_005789479.1 CDS HPPN135_01285 NC_017379.1 247731 248270 D hypothetical protein 247731..248270 Helicobacter pylori Puno135 12369812 YP_005789480.1 CDS HPPN135_01290 NC_017379.1 248348 249898 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; oligopeptide permease ATPase protein complement(248348..249898) Helicobacter pylori Puno135 12369813 YP_005789481.1 CDS HPPN135_01305 NC_017379.1 251192 251290 D hypothetical protein 251192..251290 Helicobacter pylori Puno135 12369815 YP_005789482.1 CDS HPPN135_01310 NC_017379.1 251271 252716 D Outer membrane protein HopF; putative signal peptide 251271..252716 Helicobacter pylori Puno135 12369816 YP_005789483.1 CDS HPPN135_01315 NC_017379.1 252729 254144 D putative Outer membrane protein 252729..254144 Helicobacter pylori Puno135 12369817 YP_005789484.1 CDS HPPN135_01320 NC_017379.1 254243 255478 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 254243..255478 Helicobacter pylori Puno135 12369818 YP_005789485.1 CDS HPPN135_01325 NC_017379.1 255475 255903 D hypothetical protein 255475..255903 Helicobacter pylori Puno135 12369819 YP_005789486.1 CDS HPPN135_01330 NC_017379.1 255896 256555 D COG3334 Uncharacterized conserved protein; hypothetical protein 255896..256555 Helicobacter pylori Puno135 12369820 YP_005789487.1 CDS HPPN135_01335 NC_017379.1 256555 257601 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein 256555..257601 Helicobacter pylori Puno135 12369821 YP_005789488.1 CDS xseA NC_017379.1 257614 258876 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 257614..258876 Helicobacter pylori Puno135 12369822 YP_005789489.1 CDS HPPN135_01345 NC_017379.1 258895 260067 R COG2189 Adenine specific DNA methylase Mod; type II DNA modification enzyme (methyltransferase) complement(258895..260067) Helicobacter pylori Puno135 12369823 YP_005789490.1 CDS HPPN135_01350 NC_017379.1 260060 260674 R hypothetical protein complement(260060..260674) Helicobacter pylori Puno135 12369824 YP_005789491.1 CDS HPPN135_01355 NC_017379.1 260862 261557 D Endonuclease MjaVIP 260862..261557 Helicobacter pylori Puno135 12369825 YP_005789492.1 CDS HPPN135_01360 NC_017379.1 261554 262312 D COG0863 DNA modification methylase; adenine specific DNA methyltransferase (hpaim) 261554..262312 Helicobacter pylori Puno135 12369826 YP_005789493.1 CDS HPPN135_01365 NC_017379.1 262377 264947 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease binding subunit (clpB) 262377..264947 Helicobacter pylori Puno135 12369827 YP_005789494.1 CDS HPPN135_01370 NC_017379.1 265004 265723 D COG0785 Cytochrome c biogenesis protein; cytochrome c biogenesis protein 265004..265723 Helicobacter pylori Puno135 12369828 YP_005789495.1 CDS HPPN135_01375 NC_017379.1 265733 266869 D COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 265733..266869 Helicobacter pylori Puno135 12369829 YP_005789496.1 CDS HPPN135_01380 NC_017379.1 266854 268083 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; chlorohydrolase 266854..268083 Helicobacter pylori Puno135 12369830 YP_005789497.1 CDS HPPN135_01385 NC_017379.1 268145 268387 D hypothetical protein 268145..268387 Helicobacter pylori Puno135 12369831 YP_005789498.1 CDS HPPN135_01390 NC_017379.1 268397 269710 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 268397..269710 Helicobacter pylori Puno135 12369832 YP_005789499.1 CDS HPPN135_01395 NC_017379.1 269750 270403 D COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein 269750..270403 Helicobacter pylori Puno135 12369833 YP_005789500.1 CDS HPPN135_01400 NC_017379.1 270396 271376 D hypothetical protein 270396..271376 Helicobacter pylori Puno135 12369834 YP_005789501.1 CDS HPPN135_01405 NC_017379.1 271366 271899 D hypothetical protein 271366..271899 Helicobacter pylori Puno135 12369835 YP_005789502.1 CDS HPPN135_01410 NC_017379.1 271896 272435 D hypothetical protein 271896..272435 Helicobacter pylori Puno135 12369836 YP_005789503.1 CDS HPPN135_01415 NC_017379.1 272452 272850 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 272452..272850 Helicobacter pylori Puno135 12369837 YP_005789504.1 CDS HPPN135_01420 NC_017379.1 272887 274179 D COG0457 FOG: TPR repeat; ATP-dependent nuclease 272887..274179 Helicobacter pylori Puno135 12369838 YP_005789505.1 CDS HPPN135_01425 NC_017379.1 274167 274709 D COG0134 Indole-3-glycerol phosphate synthase; hypothetical protein 274167..274709 Helicobacter pylori Puno135 12369839 YP_005789506.1 CDS HPPN135_01430 NC_017379.1 274780 275031 D COG1145 Ferredoxin; ferrodoxin 274780..275031 Helicobacter pylori Puno135 12369840 YP_005789507.1 CDS HPPN135_01435 NC_017379.1 275041 276495 D COG0248 Exopolyphosphatase; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 275041..276495 Helicobacter pylori Puno135 12369841 YP_005789508.1 CDS HPPN135_01440 NC_017379.1 276492 277502 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase-1 276492..277502 Helicobacter pylori Puno135 12369842 YP_005789509.1 CDS HPPN135_01445 NC_017379.1 277499 278485 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 277499..278485 Helicobacter pylori Puno135 12369843 YP_005789510.1 CDS tgt NC_017379.1 278541 279656 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(278541..279656) Helicobacter pylori Puno135 12369844 YP_005789511.1 CDS HPPN135_01455 NC_017379.1 279713 281149 D COG3400 Uncharacterized protein conserved in bacteria; hypothetical protein 279713..281149 Helicobacter pylori Puno135 12369845 YP_005789512.1 CDS aroB NC_017379.1 281154 282185 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 281154..282185 Helicobacter pylori Puno135 12369846 YP_005789513.1 CDS HPPN135_01465 NC_017379.1 282176 283741 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 282176..283741 Helicobacter pylori Puno135 12369847 YP_005789514.1 CDS HPPN135_01470 NC_017379.1 283738 284994 D COG0621 2-methylthioadenine synthetase; hypothetical protein 283738..284994 Helicobacter pylori Puno135 12369848 YP_005789515.1 CDS HPPN135_01475 NC_017379.1 284981 286633 D COG0465 ATP-dependent Zn proteases; cell division protein (ftsH) 284981..286633 Helicobacter pylori Puno135 12369849 YP_005789516.1 CDS HPPN135_01480 NC_017379.1 286637 287155 D hypothetical protein 286637..287155 Helicobacter pylori Puno135 12369850 YP_005789517.1 CDS HPPN135_01485 NC_017379.1 287168 287641 D hypothetical protein 287168..287641 Helicobacter pylori Puno135 12369851 YP_005789518.1 CDS HPPN135_01490 NC_017379.1 287704 296403 D toxin-like outer membrane protein 287704..296403 Helicobacter pylori Puno135 12369852 YP_005789519.1 CDS HPPN135_01495 NC_017379.1 296451 297668 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 296451..297668 Helicobacter pylori Puno135 12369853 YP_005789520.1 CDS HPPN135_01500 NC_017379.1 297673 297963 D COG1605 Chorismate mutase; hypothetical protein 297673..297963 Helicobacter pylori Puno135 12369854 YP_005789521.1 CDS HPPN135_01505 NC_017379.1 297976 298848 D COG4866 Uncharacterized conserved protein; hypothetical protein 297976..298848 Helicobacter pylori Puno135 12369855 YP_005789522.1 CDS HPPN135_01510 NC_017379.1 298849 300528 D COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthetase 298849..300528 Helicobacter pylori Puno135 12369856 YP_005789523.1 CDS amiE NC_017379.1 300721 301740 D COG0388 Predicted amidohydrolase; acylamide amidohydrolase 300721..301740 Helicobacter pylori Puno135 12369857 YP_005789524.1 CDS flgL NC_017379.1 301822 304302 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(301822..304302) Helicobacter pylori Puno135 12369858 YP_005789525.1 CDS rplU NC_017379.1 304534 304848 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 304534..304848 Helicobacter pylori Puno135 12369859 YP_005789526.1 CDS rpmA NC_017379.1 304863 305129 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 304863..305129 Helicobacter pylori Puno135 12369860 YP_005789527.1 CDS HPPN135_01535 NC_017379.1 305246 306895 D COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA) 305246..306895 Helicobacter pylori Puno135 12369861 YP_005789528.1 CDS HPPN135_01540 NC_017379.1 306906 307910 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide permease protein 306906..307910 Helicobacter pylori Puno135 12369862 YP_005789529.1 CDS HPPN135_01545 NC_017379.1 307910 308767 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transport system permease 307910..308767 Helicobacter pylori Puno135 12369863 YP_005789530.1 CDS HPPN135_01550 NC_017379.1 308779 309642 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; dipeptide ABC transporter 308779..309642 Helicobacter pylori Puno135 12369864 YP_005789531.1 CDS HPPN135_01555 NC_017379.1 309639 310445 D COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide transport system atp-binding protein 309639..310445 Helicobacter pylori Puno135 12369865 YP_005789532.1 CDS obgE NC_017379.1 310465 311547 D COG0536 Predicted GTPase; GTPase CgtA 310465..311547 Helicobacter pylori Puno135 12369866 YP_005789533.1 CDS HPPN135_01565 NC_017379.1 311589 312584 D hypothetical protein 311589..312584 Helicobacter pylori Puno135 12369867 YP_005789534.1 CDS HPPN135_01570 NC_017379.1 312833 313387 D hypothetical protein 312833..313387 Helicobacter pylori Puno135 12369868 YP_005789535.1 CDS HPPN135_01575 NC_017379.1 313397 314689 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 313397..314689 Helicobacter pylori Puno135 12369869 YP_005789536.1 CDS HPPN135_01580 NC_017379.1 314694 314951 D hypothetical protein 314694..314951 Helicobacter pylori Puno135 12369870 YP_005789537.1 CDS HPPN135_01585 NC_017379.1 314967 315371 D hypothetical protein 314967..315371 Helicobacter pylori Puno135 12369871 YP_005789538.1 CDS HPPN135_01590 NC_017379.1 315455 316339 D COG0388 Predicted amidohydrolase; hypothetical protein 315455..316339 Helicobacter pylori Puno135 12369872 YP_005789539.1 CDS HPPN135_01595 NC_017379.1 316352 317233 D COG0726 Predicted xylanase/chitin deacetylase; hypothetical protein 316352..317233 Helicobacter pylori Puno135 12369873 YP_005789540.1 CDS HPPN135_01600 NC_017379.1 317285 317977 R type II restriction enzyme complement(317285..317977) Helicobacter pylori Puno135 12369874 YP_005789541.1 CDS HPPN135_01605 NC_017379.1 317988 319097 R COG0863 DNA modification methylase; DNA methylase complement(317988..319097) Helicobacter pylori Puno135 12369875 YP_005789542.1 CDS HPPN135_01610 NC_017379.1 319193 319570 D hypothetical protein 319193..319570 Helicobacter pylori Puno135 12369876 YP_005789543.1 CDS HPPN135_01615 NC_017379.1 319570 320535 D COG0523 Putative GTPases (G3E family); ATP-binding protein 319570..320535 Helicobacter pylori Puno135 12369877 YP_005789544.1 CDS HPPN135_01620 NC_017379.1 320541 321686 R COG0477 Permeases of the major facilitator superfamily; nitrite extrusion protein (narK) complement(320541..321686) Helicobacter pylori Puno135 12369878 YP_005789545.1 CDS HPPN135_01625 NC_017379.1 322431 323186 R COG0748 Putative heme iron utilization protein; putative heme iron utilization protein complement(322431..323186) Helicobacter pylori Puno135 12369879 YP_005789546.1 CDS argS NC_017379.1 323247 324872 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(323247..324872) Helicobacter pylori Puno135 12369880 YP_005789547.1 CDS HPPN135_01635 NC_017379.1 324875 325114 R COG1826 Sec-independent protein secretion pathway components; sec-independent protein translocase protein tatA/E-like protein complement(324875..325114) Helicobacter pylori Puno135 12369881 YP_005789548.1 CDS gmk NC_017379.1 325184 325804 R COG0194 Guanylate kinase; guanylate kinase complement(325184..325804) Helicobacter pylori Puno135 12369882 YP_005789549.1 CDS HPPN135_01645 NC_017379.1 325797 327170 R poly E-rich protein complement(325797..327170) Helicobacter pylori Puno135 12369883 YP_005789550.1 CDS HPPN135_01650 NC_017379.1 327312 327854 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; nuclease NucT 327312..327854 Helicobacter pylori Puno135 12369884 YP_005789551.1 CDS HPPN135_01655 NC_017379.1 327861 328598 R outer membrane protein HorC complement(327861..328598) Helicobacter pylori Puno135 12369885 YP_005789552.1 CDS flgH NC_017379.1 328728 329441 D COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 328728..329441 Helicobacter pylori Puno135 12369886 YP_005789553.1 CDS HPPN135_01665 NC_017379.1 329459 330142 D COG1083 CMP-N-acetylneuraminic acid synthetase; CMP-N-acetylneuraminic acid synthetase 329459..330142 Helicobacter pylori Puno135 12369887 YP_005789554.1 CDS HPPN135_01670 NC_017379.1 330133 331005 D COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase; CMP-N-acetylneuraminic acid synthetase (neuA) 330133..331005 Helicobacter pylori Puno135 12369888 YP_005789555.1 CDS HPPN135_01675 NC_017379.1 331002 331544 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; flagellar biosynthesis protein G 331002..331544 Helicobacter pylori Puno135 12369889 YP_005789556.1 CDS lpxK NC_017379.1 331477 332415 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(331477..332415) Helicobacter pylori Puno135 12369890 YP_005789557.1 CDS HPPN135_01685 NC_017379.1 332412 333194 R COG0171 NAD synthase; NAD synthetase complement(332412..333194) Helicobacter pylori Puno135 12369891 YP_005789558.1 CDS HPPN135_01690 NC_017379.1 333443 334435 D COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 333443..334435 Helicobacter pylori Puno135 12369893 YP_005789559.1 CDS HPPN135_01695 NC_017379.1 334454 335260 D COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor 334454..335260 Helicobacter pylori Puno135 12369894 YP_005789560.1 CDS minE NC_017379.1 335257 335490 D COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 335257..335490 Helicobacter pylori Puno135 12369895 YP_005789561.1 CDS HPPN135_01705 NC_017379.1 335502 336302 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing protein DprA 335502..336302 Helicobacter pylori Puno135 12369896 YP_005789562.1 CDS HPPN135_01710 NC_017379.1 336299 336703 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 336299..336703 Helicobacter pylori Puno135 12369897 YP_005789563.1 CDS HPPN135_01715 NC_017379.1 336762 337982 D COG0790 FOG: TPR repeat, SEL1 subfamily; cysteine-rich protein H 336762..337982 Helicobacter pylori Puno135 12369898 YP_005789564.1 CDS HPPN135_01720 NC_017379.1 338171 338509 D hypothetical protein 338171..338509 Helicobacter pylori Puno135 12369899 YP_005789565.1 CDS HPPN135_01725 NC_017379.1 338493 339053 D hypothetical protein 338493..339053 Helicobacter pylori Puno135 12369900 YP_005789566.1 CDS HPPN135_01740 NC_017379.1 339739 339876 D hypothetical protein 339739..339876 Helicobacter pylori Puno135 12369901 YP_005789567.1 CDS HPPN135_01745 NC_017379.1 339943 340068 R hypothetical protein complement(339943..340068) Helicobacter pylori Puno135 12369902 YP_005789568.1 CDS HPPN135_01750 NC_017379.1 340067 340342 D COG3326 Predicted membrane protein; hypothetical protein 340067..340342 Helicobacter pylori Puno135 12369903 YP_005789569.1 CDS HPPN135_01755 NC_017379.1 340452 341237 D hypothetical protein 340452..341237 Helicobacter pylori Puno135 12369904 YP_005789570.1 CDS HPPN135_01760 NC_017379.1 341227 342411 D hypothetical protein 341227..342411 Helicobacter pylori Puno135 12369905 YP_005789571.1 CDS HPPN135_01765 NC_017379.1 342468 343349 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(342468..343349) Helicobacter pylori Puno135 12369906 YP_005789572.1 CDS HPPN135_01770 NC_017379.1 343349 344899 R COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease complement(343349..344899) Helicobacter pylori Puno135 12369907 YP_005789573.1 CDS pyrG NC_017379.1 344908 346524 R COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase complement(344908..346524) Helicobacter pylori Puno135 12369908 YP_005789574.1 CDS HPPN135_01780 NC_017379.1 346807 347469 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 346807..347469 Helicobacter pylori Puno135 12369909 YP_005789575.1 CDS fliF NC_017379.1 347513 349216 D COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 347513..349216 Helicobacter pylori Puno135 12369910 YP_005789576.1 CDS fliG NC_017379.1 349235 350266 D COG1536 Flagellar motor switch protein; flagellar motor switch protein G 349235..350266 Helicobacter pylori Puno135 12369911 YP_005789577.1 CDS fliH NC_017379.1 350253 351029 D COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 350253..351029 Helicobacter pylori Puno135 12369912 YP_005789578.1 CDS HPPN135_01800 NC_017379.1 351032 352882 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 351032..352882 Helicobacter pylori Puno135 12369913 YP_005789579.1 CDS HPPN135_01805 NC_017379.1 352897 354687 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 352897..354687 Helicobacter pylori Puno135 12369914 YP_005789580.1 CDS HPPN135_01810 NC_017379.1 354696 355625 D COG0270 Site-specific DNA methylase; DNA-cytosine methyltransferase 354696..355625 Helicobacter pylori Puno135 12369915 YP_005789581.1 CDS HPPN135_01815 NC_017379.1 355618 356088 D hypothetical protein 355618..356088 Helicobacter pylori Puno135 12369916 YP_005789582.1 CDS HPPN135_01820 NC_017379.1 356182 356310 D hypothetical protein 356182..356310 Helicobacter pylori Puno135 12369917 YP_005789583.1 CDS HPPN135_01825 NC_017379.1 356523 357332 R COG4786 Flagellar basal body rod protein; flagellar basal-body rod protein complement(356523..357332) Helicobacter pylori Puno135 12369918 YP_005789584.1 CDS HPPN135_01830 NC_017379.1 357388 358674 R COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate permease complement(357388..358674) Helicobacter pylori Puno135 12369919 YP_005789585.1 CDS HPPN135_01835 NC_017379.1 358837 361371 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; DNA segregation ATPase FtsK/SpoIIIE complement(358837..361371) Helicobacter pylori Puno135 12369920 YP_005789586.1 CDS HPPN135_01840 NC_017379.1 361368 363704 R COG3893 Inactivated superfamily I helicase; hypothetical protein complement(361368..363704) Helicobacter pylori Puno135 12369921 YP_005789587.1 CDS HPPN135_01845 NC_017379.1 363701 365626 R COG0021 Transketolase; transketolase complement(363701..365626) Helicobacter pylori Puno135 12369922 YP_005789588.1 CDS HPPN135_01850 NC_017379.1 365673 366515 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(365673..366515) Helicobacter pylori Puno135 12369923 YP_005789589.1 CDS HPPN135_01855 NC_017379.1 366481 367188 R COG1189 Predicted rRNA methylase; hemolysin complement(366481..367188) Helicobacter pylori Puno135 12369924 YP_005789590.1 CDS HPPN135_01860 NC_017379.1 367188 367703 R hypothetical protein complement(367188..367703) Helicobacter pylori Puno135 12369925 YP_005789591.1 CDS pyrB NC_017379.1 367770 368693 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 367770..368693 Helicobacter pylori Puno135 12369926 YP_005789592.1 CDS HPPN135_01870 NC_017379.1 368989 370428 D hypothetical protein 368989..370428 Helicobacter pylori Puno135 12369927 YP_005789593.1 CDS HPPN135_01875 NC_017379.1 370520 372175 D COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug resistance protein (msbA) 370520..372175 Helicobacter pylori Puno135 12369928 YP_005789594.1 CDS HPPN135_01880 NC_017379.1 372169 372792 D hypothetical protein 372169..372792 Helicobacter pylori Puno135 12369929 YP_005789595.1 CDS HPPN135_01885 NC_017379.1 372796 373365 D COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes; hypothetical protein 372796..373365 Helicobacter pylori Puno135 12369930 YP_005789596.1 CDS HPPN135_01890 NC_017379.1 373476 374660 D COG1106 Predicted ATPases; hypothetical protein 373476..374660 Helicobacter pylori Puno135 12369931 YP_005789597.1 CDS HPPN135_01895 NC_017379.1 374653 375333 D hypothetical protein 374653..375333 Helicobacter pylori Puno135 12369932 YP_005789598.1 CDS HPPN135_01900 NC_017379.1 375407 376402 D COG3376 High-affinity nickel permease; high-affinity nickel-transport protein 375407..376402 Helicobacter pylori Puno135 12369933 YP_005789599.1 CDS HPPN135_01905 NC_017379.1 376406 376921 R hypothetical protein complement(376406..376921) Helicobacter pylori Puno135 12369934 YP_005789600.1 CDS HPPN135_01910 NC_017379.1 377054 378370 D hypothetical protein 377054..378370 Helicobacter pylori Puno135 12369935 YP_005789601.1 CDS HPPN135_01915 NC_017379.1 379020 379220 R COG2608 Copper chaperone; COP-associated protein complement(379020..379220) Helicobacter pylori Puno135 12369936 YP_005789602.1 CDS HPPN135_01920 NC_017379.1 379221 381446 R COG2217 Cation transport ATPase; copper-transporting ATPase complement(379221..381446) Helicobacter pylori Puno135 12369937 YP_005789603.1 CDS HPPN135_01925 NC_017379.1 381443 382156 R COG1183 Phosphatidylserine synthase; phosphatidylserine synthase complement(381443..382156) Helicobacter pylori Puno135 12369938 YP_005789604.1 CDS HPPN135_01930 NC_017379.1 382146 382400 R hypothetical protein complement(382146..382400) Helicobacter pylori Puno135 12369939 YP_005789605.1 CDS HPPN135_01935 NC_017379.1 382403 384301 R COG0465 ATP-dependent Zn proteases; cell division protein (ftsH) complement(382403..384301) Helicobacter pylori Puno135 12369940 YP_005789606.1 CDS prmA NC_017379.1 384310 385299 R COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase complement(384310..385299) Helicobacter pylori Puno135 12369941 YP_005789607.1 CDS HPPN135_01945 NC_017379.1 385300 385674 R COG0784 FOG: CheY-like receiver; response regulator complement(385300..385674) Helicobacter pylori Puno135 12369942 YP_005789608.1 CDS HPPN135_01950 NC_017379.1 385965 386567 D outer membrane protein HorD 385965..386567 Helicobacter pylori Puno135 12369943 YP_005789609.1 CDS HPPN135_01955 NC_017379.1 386699 387106 R hypothetical protein complement(386699..387106) Helicobacter pylori Puno135 12369945 YP_005789610.1 CDS HPPN135_01960 NC_017379.1 387109 387351 R hypothetical protein complement(387109..387351) Helicobacter pylori Puno135 12369946 YP_005789611.1 CDS gidB NC_017379.1 387345 387881 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(387345..387881) Helicobacter pylori Puno135 12369947 YP_005789612.1 CDS queA NC_017379.1 387878 388915 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(387878..388915) Helicobacter pylori Puno135 12369948 YP_005789613.1 CDS HPPN135_01975 NC_017379.1 388916 389665 R COG0805 Sec-independent protein secretion pathway component TatC; sec-independent protein translocase protein tatC-like protein complement(388916..389665) Helicobacter pylori Puno135 12369949 YP_005789614.1 CDS HPPN135_01980 NC_017379.1 389658 390140 R COG1826 Sec-independent protein secretion pathway components; sec-independent translocase complement(389658..390140) Helicobacter pylori Puno135 12369950 YP_005789615.1 CDS ruvB NC_017379.1 390208 391218 R COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB complement(390208..391218) Helicobacter pylori Puno135 12369951 YP_005789616.1 CDS panB NC_017379.1 391219 392031 R COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(391219..392031) Helicobacter pylori Puno135 12369952 YP_005789617.1 CDS HPPN135_01995 NC_017379.1 392179 392901 D hypothetical protein 392179..392901 Helicobacter pylori Puno135 12369953 YP_005789618.1 CDS HPPN135_02000 NC_017379.1 392891 393745 D hypothetical protein 392891..393745 Helicobacter pylori Puno135 12369954 YP_005789619.1 CDS HPPN135_02005 NC_017379.1 393757 394698 D hypothetical protein 393757..394698 Helicobacter pylori Puno135 12369955 YP_005789620.1 CDS HPPN135_02010 NC_017379.1 394708 396030 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 394708..396030 Helicobacter pylori Puno135 12369956 YP_005789621.1 CDS minC NC_017379.1 396033 396620 D COG0850 Septum formation inhibitor; septum formation inhibitor 396033..396620 Helicobacter pylori Puno135 12369957 YP_005789622.1 CDS lpxC NC_017379.1 396617 397504 D COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 396617..397504 Helicobacter pylori Puno135 12369958 YP_005789623.1 CDS HPPN135_02025 NC_017379.1 397526 397999 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 397526..397999 Helicobacter pylori Puno135 12369959 YP_005789624.1 CDS HPPN135_02030 NC_017379.1 398054 398935 D COG0083 Homoserine kinase; homoserine kinase 398054..398935 Helicobacter pylori Puno135 12369960 YP_005789625.1 CDS HPPN135_02035 NC_017379.1 398922 399176 D COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 398922..399176 Helicobacter pylori Puno135 12369961 YP_005789626.1 CDS infB NC_017379.1 399173 402025 D COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 399173..402025 Helicobacter pylori Puno135 12369962 YP_005789627.1 CDS rbfA NC_017379.1 402025 402360 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 402025..402360 Helicobacter pylori Puno135 12369963 YP_005789628.1 CDS HPPN135_02050 NC_017379.1 402353 402793 D COG0779 Uncharacterized protein conserved in bacteria; Ribosome maturation factor rimP 402353..402793 Helicobacter pylori Puno135 12369964 YP_005789629.1 CDS HPPN135_02055 NC_017379.1 402901 404889 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase complement(402901..404889) Helicobacter pylori Puno135 12369965 YP_005789630.1 CDS HPPN135_02060 NC_017379.1 405089 406201 D COG1408 Predicted phosphohydrolases; hypothetical protein 405089..406201 Helicobacter pylori Puno135 12369966 YP_005789631.1 CDS HPPN135_02065 NC_017379.1 406382 406492 D hypothetical protein 406382..406492 Helicobacter pylori Puno135 12369967 YP_005789632.1 CDS HPPN135_02070 NC_017379.1 406552 407223 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 406552..407223 Helicobacter pylori Puno135 12369968 YP_005789633.1 CDS HPPN135_02075 NC_017379.1 407554 408597 R COG2404 Predicted phosphohydrolase (DHH superfamily); hypothetical protein complement(407554..408597) Helicobacter pylori Puno135 12369969 YP_005789634.1 CDS flhA NC_017379.1 408628 410829 R COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA complement(408628..410829) Helicobacter pylori Puno135 12369970 YP_005789635.1 CDS rpsO NC_017379.1 410968 411240 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 410968..411240 Helicobacter pylori Puno135 12369971 YP_005789636.1 CDS HPPN135_02090 NC_017379.1 411271 412560 D COG3307 Lipid A core - O-antigen ligase and related enzymes; hypothetical protein 411271..412560 Helicobacter pylori Puno135 12369972 YP_005789637.1 CDS HPPN135_02095 NC_017379.1 412689 413192 D COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 412689..413192 Helicobacter pylori Puno135 12369973 YP_005789638.1 CDS HPPN135_02100 NC_017379.1 413206 414279 D COG0006 Xaa-Pro aminopeptidase; X-Pro aminopeptidase 413206..414279 Helicobacter pylori Puno135 12369974 YP_005789639.1 CDS HPPN135_02105 NC_017379.1 414276 414767 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 414276..414767 Helicobacter pylori Puno135 12369975 YP_005789640.1 CDS flhF NC_017379.1 414764 416140 D COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF 414764..416140 Helicobacter pylori Puno135 12369976 YP_005789641.1 CDS HPPN135_02115 NC_017379.1 416137 417021 D COG0455 ATPases involved in chromosome partitioning; ATP-binding protein (ylxH) 416137..417021 Helicobacter pylori Puno135 12369977 YP_005789642.1 CDS HPPN135_02120 NC_017379.1 417026 417340 D hypothetical protein 417026..417340 Helicobacter pylori Puno135 12369978 YP_005789643.1 CDS fliA NC_017379.1 417318 418094 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 417318..418094 Helicobacter pylori Puno135 12369979 YP_005789644.1 CDS fliM NC_017379.1 418087 419151 D COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 418087..419151 Helicobacter pylori Puno135 12369980 YP_005789645.1 CDS HPPN135_02135 NC_017379.1 419155 420036 D COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliY 419155..420036 Helicobacter pylori Puno135 12369981 YP_005789646.1 CDS HPPN135_02140 NC_017379.1 420065 420601 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 420065..420601 Helicobacter pylori Puno135 12369982 YP_005789647.1 CDS HPPN135_02145 NC_017379.1 420598 421095 D COG4731 Uncharacterized protein conserved in bacteria; hypothetical protein 420598..421095 Helicobacter pylori Puno135 12369983 YP_005789648.1 CDS HPPN135_02150 NC_017379.1 421114 421566 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein complement(421114..421566) Helicobacter pylori Puno135 12369984 YP_005789649.1 CDS HPPN135_02155 NC_017379.1 421726 422901 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(421726..422901) Helicobacter pylori Puno135 12369985 YP_005789650.1 CDS HPPN135_02160 NC_017379.1 422898 423269 R HspR; COG0789 Predicted transcriptional regulators; putative heat shock protein complement(422898..423269) Helicobacter pylori Puno135 12369986 YP_005789651.1 CDS HPPN135_02165 NC_017379.1 423279 424145 R COG2214 DnaJ-class molecular chaperone; co-chaperone-curved DNA binding protein A complement(423279..424145) Helicobacter pylori Puno135 12369987 YP_005789652.1 CDS HPPN135_02170 NC_017379.1 424313 425563 D hypothetical protein 424313..425563 Helicobacter pylori Puno135 12369988 YP_005789653.1 CDS HPPN135_02175 NC_017379.1 425626 426444 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); 5'-3' exonuclease complement(425626..426444) Helicobacter pylori Puno135 12369989 YP_005789654.1 CDS HPPN135_02180 NC_017379.1 426488 426664 R hypothetical protein complement(426488..426664) Helicobacter pylori Puno135 12369990 YP_005789655.1 CDS HPPN135_02185 NC_017379.1 426718 427614 R COG0784 FOG: CheY-like receiver; response regulator complement(426718..427614) Helicobacter pylori Puno135 12369991 YP_005789656.1 CDS ispDF NC_017379.1 427631 428851 R COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(427631..428851) Helicobacter pylori Puno135 12369992 YP_005789657.1 CDS HPPN135_02195 NC_017379.1 428873 430303 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; protease DO complement(428873..430303) Helicobacter pylori Puno135 12369993 YP_005789658.1 CDS HPPN135_02200 NC_017379.1 430347 431789 R COG0833 Amino acid transporters; amino acid permease complement(430347..431789) Helicobacter pylori Puno135 12369994 YP_005789659.1 CDS HPPN135_02205 NC_017379.1 431984 432523 R COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase complement(431984..432523) Helicobacter pylori Puno135 12369995 YP_005789660.1 CDS HPPN135_02210 NC_017379.1 432520 433128 R hypothetical protein complement(432520..433128) Helicobacter pylori Puno135 12369996 YP_005789661.1 CDS HPPN135_02215 NC_017379.1 433138 433926 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase complement(433138..433926) Helicobacter pylori Puno135 12369997 YP_005789662.1 CDS HPPN135_02220 NC_017379.1 433923 434825 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(433923..434825) Helicobacter pylori Puno135 12369998 YP_005789663.1 CDS HPPN135_02225 NC_017379.1 434840 436174 R COG0612 Predicted Zn-dependent peptidases; putative zinc protease complement(434840..436174) Helicobacter pylori Puno135 12369999 YP_005789664.1 CDS HPPN135_02230 NC_017379.1 436171 437226 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(436171..437226) Helicobacter pylori Puno135 12370000 YP_005789665.1 CDS HPPN135_02235 NC_017379.1 437263 439290 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(437263..439290) Helicobacter pylori Puno135 12370001 YP_005789666.1 CDS HPPN135_02245 NC_017379.1 439722 439823 D hypothetical protein 439722..439823 Helicobacter pylori Puno135 12370003 YP_005789667.1 CDS HPPN135_02250 NC_017379.1 439951 441069 R COG0732 Restriction endonuclease S subunits; type I restriction enzyme S protein complement(439951..441069) Helicobacter pylori Puno135 12370004 YP_005789668.1 CDS HPPN135_02255 NC_017379.1 441062 442693 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(441062..442693) Helicobacter pylori Puno135 12370005 YP_005789669.1 CDS HPPN135_02260 NC_017379.1 442686 444950 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(442686..444950) Helicobacter pylori Puno135 12370006 YP_005789670.1 CDS HPPN135_02265 NC_017379.1 445006 445230 D hypothetical protein 445006..445230 Helicobacter pylori Puno135 12370007 YP_005789671.1 CDS HPPN135_02270 NC_017379.1 445258 445890 R HsdR; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(445258..445890) Helicobacter pylori Puno135 12370008 YP_005789672.1 CDS HPPN135_02275 NC_017379.1 445938 447833 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(445938..447833) Helicobacter pylori Puno135 12370009 YP_005789673.1 CDS HPPN135_02280 NC_017379.1 447859 448626 R hypothetical protein complement(447859..448626) Helicobacter pylori Puno135 12370010 YP_005789674.1 CDS HPPN135_02285 NC_017379.1 448636 448950 R hypothetical protein complement(448636..448950) Helicobacter pylori Puno135 12370011 YP_005789675.1 CDS HPPN135_02290 NC_017379.1 448952 450439 R COG2048 Heterodisulfide reductase, subunit B; hypothetical protein complement(448952..450439) Helicobacter pylori Puno135 12370012 YP_005789676.1 CDS HPPN135_02295 NC_017379.1 450451 450939 R hypothetical protein complement(450451..450939) Helicobacter pylori Puno135 12370013 YP_005789677.1 CDS HPPN135_02300 NC_017379.1 450924 452660 R COG1164 Oligoendopeptidase F; oligoendopeptidase F complement(450924..452660) Helicobacter pylori Puno135 12370014 YP_005789678.1 CDS HPPN135_02305 NC_017379.1 452762 454012 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein (kefB) complement(452762..454012) Helicobacter pylori Puno135 12370015 YP_005789679.1 CDS HPPN135_02310 NC_017379.1 454331 454891 R hypothetical protein complement(454331..454891) Helicobacter pylori Puno135 12370016 YP_005789680.1 CDS HPPN135_02315 NC_017379.1 455111 455851 D COG0725 ABC-type molybdate transport system, periplasmic component; molybdenum ABC transporter ModA 455111..455851 Helicobacter pylori Puno135 12370017 YP_005789681.1 CDS HPPN135_02320 NC_017379.1 455873 456547 D COG4149 ABC-type molybdate transport system, permease component; molybdenum ABC transporter ModB 455873..456547 Helicobacter pylori Puno135 12370018 YP_005789682.1 CDS HPPN135_02325 NC_017379.1 456544 457341 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; molybdenum ABC transporter ModD 456544..457341 Helicobacter pylori Puno135 12370019 YP_005789683.1 CDS gltX NC_017379.1 457423 458814 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(457423..458814) Helicobacter pylori Puno135 12370020 YP_005789684.1 CDS HPPN135_02335 NC_017379.1 458932 460035 D outer membrane protein (omp22) 458932..460035 Helicobacter pylori Puno135 12370021 YP_005789685.1 CDS HPPN135_02340 NC_017379.1 460045 461682 D COG0286 Type I restriction-modification system methyltransferase subunit; type II adenine specific methyltransferase 460045..461682 Helicobacter pylori Puno135 12370022 YP_005789686.1 CDS HPPN135_02345 NC_017379.1 461648 462496 D COG0859 ADP-heptose:LPS heptosyltransferase; type II adenine specific methyltransferase 461648..462496 Helicobacter pylori Puno135 12370023 YP_005789687.1 CDS HPPN135_02350 NC_017379.1 462542 464341 D COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein TypA 462542..464341 Helicobacter pylori Puno135 12370024 YP_005789688.1 CDS HPPN135_02355 NC_017379.1 464357 465286 D COG0338 Site-specific DNA methylase; type II adenine specific DNA methyltransferase 464357..465286 Helicobacter pylori Puno135 12370025 YP_005789689.1 CDS HPPN135_02360 NC_017379.1 465289 465912 D type II restriction endonuclease 465289..465912 Helicobacter pylori Puno135 12370026 YP_005789690.1 CDS HPPN135_02365 NC_017379.1 466003 467058 D COG0270 Site-specific DNA methylase; type II DNA modification methyltransferase 466003..467058 Helicobacter pylori Puno135 12370027 YP_005789691.1 CDS HPPN135_02370 NC_017379.1 467051 467803 D hypothetical protein 467051..467803 Helicobacter pylori Puno135 12370028 YP_005789692.1 CDS HPPN135_02375 NC_017379.1 468035 468979 R COG0753 Catalase; catalase-like protein complement(468035..468979) Helicobacter pylori Puno135 12370029 YP_005789693.1 CDS HPPN135_02380 NC_017379.1 469266 470852 D outer membrane protein HofC 469266..470852 Helicobacter pylori Puno135 12370030 YP_005789694.1 CDS HPPN135_02385 NC_017379.1 470922 472319 D outer membrane protein HofD 470922..472319 Helicobacter pylori Puno135 12370031 YP_005789695.1 CDS HPPN135_02390 NC_017379.1 472549 472749 R hypothetical protein complement(472549..472749) Helicobacter pylori Puno135 12370032 YP_005789696.1 CDS HPPN135_02395 NC_017379.1 472736 475468 D mosaic CUP0956/HP1116/jhp1044-like protein; hypothetical protein 472736..475468 Helicobacter pylori Puno135 12370033 YP_005789697.1 CDS HPPN135_02400 NC_017379.1 475478 475957 D hypothetical protein 475478..475957 Helicobacter pylori Puno135 12370034 YP_005789698.1 CDS HPPN135_02405 NC_017379.1 475942 477078 R COG1226 Kef-type K+ transport systems, predicted NAD-binding component; putative potassium channel protein complement(475942..477078) Helicobacter pylori Puno135 12370035 YP_005789699.1 CDS rpmB NC_017379.1 477238 477426 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(477238..477426) Helicobacter pylori Puno135 12370036 YP_005789700.1 CDS HPPN135_02415 NC_017379.1 477526 478359 R hypothetical protein complement(477526..478359) Helicobacter pylori Puno135 12370037 YP_005789701.1 CDS mraY NC_017379.1 478486 479547 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 478486..479547 Helicobacter pylori Puno135 12370038 YP_005789702.1 CDS murD NC_017379.1 479549 480817 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 479549..480817 Helicobacter pylori Puno135 12370039 YP_005789703.1 CDS HPPN135_02430 NC_017379.1 480814 481074 R hypothetical protein complement(480814..481074) Helicobacter pylori Puno135 12370040 YP_005789704.1 CDS HPPN135_02435 NC_017379.1 481064 481465 R COG0824 Predicted thioesterase; hypothetical protein complement(481064..481465) Helicobacter pylori Puno135 12370041 YP_005789705.1 CDS HPPN135_02440 NC_017379.1 481695 483023 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 481695..483023 Helicobacter pylori Puno135 12370042 YP_005789706.1 CDS HPPN135_02445 NC_017379.1 483036 484364 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 483036..484364 Helicobacter pylori Puno135 12370043 YP_005789707.1 CDS HPPN135_02450 NC_017379.1 484379 485446 D COG2829 Outer membrane phospholipase A; phospholipase A1 484379..485446 Helicobacter pylori Puno135 12370044 YP_005789708.1 CDS HPPN135_02455 NC_017379.1 485503 486627 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 485503..486627 Helicobacter pylori Puno135 12370045 YP_005789709.1 CDS gyrB NC_017379.1 486639 488960 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 486639..488960 Helicobacter pylori Puno135 12370046 YP_005789710.1 CDS HPPN135_02465 NC_017379.1 489057 489329 R hypothetical protein complement(489057..489329) Helicobacter pylori Puno135 12370047 YP_005789711.1 CDS HPPN135_02470 NC_017379.1 489328 489546 D hypothetical protein 489328..489546 Helicobacter pylori Puno135 12370048 YP_005789712.1 CDS HPPN135_02475 NC_017379.1 489911 491122 D COG0739 Membrane proteins related to metalloendopeptidases; putative outer membrane protein 489911..491122 Helicobacter pylori Puno135 12370049 YP_005789713.1 CDS HPPN135_02480 NC_017379.1 491122 491760 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 491122..491760 Helicobacter pylori Puno135 12370050 YP_005789714.1 CDS HPPN135_02485 NC_017379.1 491771 493078 D plasminogen binding protein 491771..493078 Helicobacter pylori Puno135 12370051 YP_005789715.1 CDS HPPN135_02490 NC_017379.1 493080 494459 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit 493080..494459 Helicobacter pylori Puno135 12370052 YP_005789716.1 CDS HPPN135_02495 NC_017379.1 494482 495246 D COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 494482..495246 Helicobacter pylori Puno135 12370053 YP_005789717.1 CDS HPPN135_02500 NC_017379.1 495575 495682 D hypothetical protein 495575..495682 Helicobacter pylori Puno135 12370054 YP_005789718.1 CDS HPPN135_02505 NC_017379.1 495864 497309 R COG0174 Glutamine synthetase; glutamine synthetase complement(495864..497309) Helicobacter pylori Puno135 12370055 YP_005789719.1 CDS HPPN135_02510 NC_017379.1 497448 499517 D COG1479 Uncharacterized conserved protein; hypothetical protein 497448..499517 Helicobacter pylori Puno135 12370056 YP_005789720.1 CDS rplI NC_017379.1 499580 500029 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 499580..500029 Helicobacter pylori Puno135 12370057 YP_005789721.1 CDS HPPN135_02520 NC_017379.1 500033 500575 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 500033..500575 Helicobacter pylori Puno135 12370058 YP_005789722.1 CDS hslU NC_017379.1 500584 501906 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 500584..501906 Helicobacter pylori Puno135 12370059 YP_005789723.1 CDS era NC_017379.1 501906 502811 D COG1159 GTPase; GTPase Era 501906..502811 Helicobacter pylori Puno135 12370060 YP_005789724.1 CDS HPPN135_02535 NC_017379.1 502808 503800 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 502808..503800 Helicobacter pylori Puno135 12370061 YP_005789725.1 CDS HPPN135_02540 NC_017379.1 503870 504724 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(503870..504724) Helicobacter pylori Puno135 12370062 YP_005789726.1 CDS HPPN135_02545 NC_017379.1 504895 505242 D Cag1; cag pathogenicity island protein 504895..505242 Helicobacter pylori Puno135 12370063 YP_005789727.1 CDS HPPN135_02550 NC_017379.1 505350 505679 D COG0551 Zn-finger domain associated with topoisomerase type I; cag pathogenicity island protein Epsilon 505350..505679 Helicobacter pylori Puno135 12370064 YP_005789728.1 CDS HPPN135_02555 NC_017379.1 505700 507145 D cag pathogenicity island protein 3 505700..507145 Helicobacter pylori Puno135 12370065 YP_005789729.1 CDS HPPN135_02560 NC_017379.1 507150 507659 D cag pathogenicity island protein 4 507150..507659 Helicobacter pylori Puno135 12370066 YP_005789730.1 CDS HPPN135_02565 NC_017379.1 507778 510024 R COG3505 Type IV secretory pathway, VirD4 components; CAG pathogenicity island protein 5 complement(507778..510024) Helicobacter pylori Puno135 12370067 YP_005789731.1 CDS HPPN135_02570 NC_017379.1 510033 511025 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; cag pathogenicity island protein cag alpha complement(510033..511025) Helicobacter pylori Puno135 12370068 YP_005789732.1 CDS HPPN135_02575 NC_017379.1 511030 511629 R CagZ; Cag6; cag pathogenicity island protein complement(511030..511629) Helicobacter pylori Puno135 12370069 YP_005789733.1 CDS HPPN135_02580 NC_017379.1 511642 511776 R hypothetical protein complement(511642..511776) Helicobacter pylori Puno135 12370070 YP_005789734.1 CDS HPPN135_02585 NC_017379.1 511766 517369 R Cag7; COG2948 Type IV secretory pathway, VirB10 components; cag pathogenicity island protein complement(511766..517369) Helicobacter pylori Puno135 12370071 YP_005789735.1 CDS HPPN135_02590 NC_017379.1 517384 518949 R CagX; Cag8; COG3504 Type IV secretory pathway, VirB9 components; cag pathogenicity island protein complement(517384..518949) Helicobacter pylori Puno135 12370072 YP_005789736.1 CDS HPPN135_02595 NC_017379.1 519002 520609 R cag pathogenicity island protein W complement(519002..520609) Helicobacter pylori Puno135 12370073 YP_005789737.1 CDS HPPN135_02600 NC_017379.1 520614 521372 R CagV; Cag10; COG3736 Type IV secretory pathway, component VirB8; cag pathogenicity island protein complement(520614..521372) Helicobacter pylori Puno135 12370074 YP_005789738.1 CDS HPPN135_02605 NC_017379.1 521631 522278 D CagU; Cag11; cag pathogenicity island protein 521631..522278 Helicobacter pylori Puno135 12370075 YP_005789739.1 CDS HPPN135_02610 NC_017379.1 522294 523136 D CAG pathogenicity island protein T 522294..523136 Helicobacter pylori Puno135 12370076 YP_005789740.1 CDS HPPN135_02615 NC_017379.1 523338 523937 R CAG pathogenicity island protein S complement(523338..523937) Helicobacter pylori Puno135 12370077 YP_005789741.1 CDS HPPN135_02620 NC_017379.1 524371 524475 R hypothetical protein complement(524371..524475) Helicobacter pylori Puno135 12370078 YP_005789742.1 CDS HPPN135_02625 NC_017379.1 524641 524820 D hypothetical protein 524641..524820 Helicobacter pylori Puno135 12370079 YP_005789743.1 CDS HPPN135_02630 NC_017379.1 524849 525154 D CagQ; Cag14; cag pathogenicity island protein 524849..525154 Helicobacter pylori Puno135 12370080 YP_005789744.1 CDS HPPN135_02635 NC_017379.1 525212 525361 D hypothetical protein 525212..525361 Helicobacter pylori Puno135 12370081 YP_005789745.1 CDS HPPN135_02640 NC_017379.1 525653 525796 R hypothetical protein complement(525653..525796) Helicobacter pylori Puno135 12370082 YP_005789746.1 CDS HPPN135_02645 NC_017379.1 526441 526653 D hypothetical protein 526441..526653 Helicobacter pylori Puno135 12370083 YP_005789747.1 CDS HPPN135_02650 NC_017379.1 526885 528015 D cag pathogenicity island protein M 526885..528015 Helicobacter pylori Puno135 12370084 YP_005789748.1 CDS HPPN135_02655 NC_017379.1 528030 528941 D CagN; Cag17; cag pathogenicity island protein 528030..528941 Helicobacter pylori Puno135 12370085 YP_005789749.1 CDS HPPN135_02660 NC_017379.1 529024 529731 R CagL; Cag18; cag pathogenicity island protein complement(529024..529731) Helicobacter pylori Puno135 12370086 YP_005789750.1 CDS HPPN135_02665 NC_017379.1 529728 530867 R CagI; Cag19; cag pathogenicity island protein complement(529728..530867) Helicobacter pylori Puno135 12370087 YP_005789751.1 CDS HPPN135_02670 NC_017379.1 530878 531990 R COG0249 Mismatch repair ATPase (MutS family); cag pathogenicity island protein H complement(530878..531990) Helicobacter pylori Puno135 12370088 YP_005789752.1 CDS HPPN135_02675 NC_017379.1 531992 532423 R CagG; Cag21; cag pathogenicity island protein complement(531992..532423) Helicobacter pylori Puno135 12370089 YP_005789753.1 CDS HPPN135_02680 NC_017379.1 532478 533284 R CagF: Cag22; cag pathogenicity island protein complement(532478..533284) Helicobacter pylori Puno135 12370090 YP_005789754.1 CDS HPPN135_02685 NC_017379.1 533286 536237 R COG3451 Type IV secretory pathway, VirB4 components; cag pathogenicity island protein E complement(533286..536237) Helicobacter pylori Puno135 12370091 YP_005789755.1 CDS HPPN135_02690 NC_017379.1 536246 536869 R CagD; Cag24; cag pathogenicity island protein complement(536246..536869) Helicobacter pylori Puno135 12370092 YP_005789756.1 CDS HPPN135_02695 NC_017379.1 536871 537218 R cag pathogenicity island protein C complement(536871..537218) Helicobacter pylori Puno135 12370093 YP_005789757.1 CDS HPPN135_02700 NC_017379.1 537387 537614 R CagB; cag pathogenicity island protein complement(537387..537614) Helicobacter pylori Puno135 12370094 YP_005789758.1 CDS HPPN135_02705 NC_017379.1 538020 541628 D CagA; Cag26; COG0419 ATPase involved in DNA repair; cag pathogenicity island protein 538020..541628 Helicobacter pylori Puno135 12370095 YP_005789759.1 CDS HPPN135_02710 NC_017379.1 542022 542789 R COG0796 Glutamate racemase; glutamate racemase complement(542022..542789) Helicobacter pylori Puno135 12370096 YP_005789760.1 CDS rho NC_017379.1 542826 544142 R COG1158 Transcription termination factor; transcription termination factor Rho complement(542826..544142) Helicobacter pylori Puno135 12370097 YP_005789761.1 CDS rpmE NC_017379.1 544401 544604 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 544401..544604 Helicobacter pylori Puno135 12370098 YP_005789762.1 CDS HPPN135_02725 NC_017379.1 544629 545492 D COG0313 Predicted methyltransferases; hypothetical protein 544629..545492 Helicobacter pylori Puno135 12370099 YP_005789763.1 CDS HPPN135_02730 NC_017379.1 545505 546188 D COG0566 rRNA methylases; RNA methyltransferase 545505..546188 Helicobacter pylori Puno135 12370100 YP_005789764.1 CDS HPPN135_02735 NC_017379.1 546201 547175 D hypothetical protein 546201..547175 Helicobacter pylori Puno135 12370101 YP_005789765.1 CDS HPPN135_02740 NC_017379.1 547172 547993 D COG1217 Predicted membrane GTPase involved in stress response; hypothetical protein 547172..547993 Helicobacter pylori Puno135 12370102 YP_005789766.1 CDS HPPN135_02745 NC_017379.1 548465 549403 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(548465..549403) Helicobacter pylori Puno135 12370103 YP_005789767.1 CDS HPPN135_02750 NC_017379.1 549426 550664 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(549426..550664) Helicobacter pylori Puno135 12370104 YP_005789768.1 CDS HPPN135_02755 NC_017379.1 550675 550788 R hypothetical protein complement(550675..550788) Helicobacter pylori Puno135 12370105 YP_005789769.1 CDS acpP NC_017379.1 550981 551217 R COG0236 Acyl carrier protein; acyl carrier protein complement(550981..551217) Helicobacter pylori Puno135 12370106 YP_005789770.1 CDS fabG NC_017379.1 551447 552190 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(551447..552190) Helicobacter pylori Puno135 12370107 YP_005789771.1 CDS rpsU NC_017379.1 552227 552439 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(552227..552439) Helicobacter pylori Puno135 12370108 YP_005789772.1 CDS HPPN135_02775 NC_017379.1 552541 553791 R hypothetical protein complement(552541..553791) Helicobacter pylori Puno135 12370109 YP_005789773.1 CDS HPPN135_02780 NC_017379.1 553964 554206 D hypothetical protein 553964..554206 Helicobacter pylori Puno135 12370110 YP_005789774.1 CDS HPPN135_02785 NC_017379.1 554230 554877 R COG3059 Predicted membrane protein; hypothetical protein complement(554230..554877) Helicobacter pylori Puno135 12370111 YP_005789775.1 CDS dapF NC_017379.1 554984 555805 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(554984..555805) Helicobacter pylori Puno135 12370112 YP_005789776.1 CDS HPPN135_02795 NC_017379.1 555921 556967 D COG0628 Predicted permease; membrane protein 555921..556967 Helicobacter pylori Puno135 12370113 YP_005789777.1 CDS HPPN135_02800 NC_017379.1 557096 557863 R COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; hypothetical protein complement(557096..557863) Helicobacter pylori Puno135 12370114 YP_005789778.1 CDS HPPN135_02805 NC_017379.1 558007 559107 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(558007..559107) Helicobacter pylori Puno135 12370115 YP_005789779.1 CDS HPPN135_02810 NC_017379.1 559109 560599 R COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A complement(559109..560599) Helicobacter pylori Puno135 12370116 YP_005789780.1 CDS HPPN135_02815 NC_017379.1 560647 561225 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(560647..561225) Helicobacter pylori Puno135 12370117 YP_005789781.1 CDS HPPN135_02820 NC_017379.1 561240 561779 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(561240..561779) Helicobacter pylori Puno135 12370118 YP_005789782.1 CDS HPPN135_02825 NC_017379.1 561837 562169 R hypothetical protein complement(561837..562169) Helicobacter pylori Puno135 12370119 YP_005789783.1 CDS HPPN135_02830 NC_017379.1 562222 562677 R COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B complement(562222..562677) Helicobacter pylori Puno135 12370120 YP_005789784.1 CDS HPPN135_02835 NC_017379.1 562698 563396 R COG1994 Zn-dependent proteases; membrane protein complement(562698..563396) Helicobacter pylori Puno135 12370121 YP_005789785.1 CDS HPPN135_02840 NC_017379.1 563405 564277 R COG0681 Signal peptidase I; signal peptidase I (lepB) complement(563405..564277) Helicobacter pylori Puno135 12370122 YP_005789786.1 CDS HPPN135_02845 NC_017379.1 564277 565149 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(564277..565149) Helicobacter pylori Puno135 12370123 YP_005789787.1 CDS HPPN135_02850 NC_017379.1 565229 567256 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; hypothetical protein complement(565229..567256) Helicobacter pylori Puno135 12370124 YP_005789788.1 CDS HPPN135_02855 NC_017379.1 567262 567816 R hypothetical protein complement(567262..567816) Helicobacter pylori Puno135 12370125 YP_005789789.1 CDS HPPN135_02860 NC_017379.1 567823 568941 R COG4692 Predicted neuraminidase (sialidase); hypothetical protein complement(567823..568941) Helicobacter pylori Puno135 12370126 YP_005789790.1 CDS HPPN135_02865 NC_017379.1 568917 569936 R COG0418 Dihydroorotase; dihydroorotase complement(568917..569936) Helicobacter pylori Puno135 12370127 YP_005789791.1 CDS HPPN135_02870 NC_017379.1 569940 570884 R COG0810 Periplasmic protein TonB, links inner and outer membranes; hypothetical protein complement(569940..570884) Helicobacter pylori Puno135 12370128 YP_005789792.1 CDS HPPN135_02875 NC_017379.1 570868 571743 R hypothetical protein complement(570868..571743) Helicobacter pylori Puno135 12370129 YP_005789793.1 CDS HPPN135_02880 NC_017379.1 571740 572111 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein complement(571740..572111) Helicobacter pylori Puno135 12370130 YP_005789794.1 CDS HPPN135_02885 NC_017379.1 572193 572831 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(572193..572831) Helicobacter pylori Puno135 12370131 YP_005789795.1 CDS HPPN135_02890 NC_017379.1 572834 573064 R COG1918 Fe2+ transport system protein A; ferrous iron transport protein A complement(572834..573064) Helicobacter pylori Puno135 12370132 YP_005789796.1 CDS HPPN135_02895 NC_017379.1 573061 576000 R hypothetical protein complement(573061..576000) Helicobacter pylori Puno135 12370133 YP_005789797.1 CDS HPPN135_02900 NC_017379.1 575981 576913 D COG1559 Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase (pabC) 575981..576913 Helicobacter pylori Puno135 12370134 YP_005789798.1 CDS oorD NC_017379.1 577089 577430 D COG1146 Ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 577089..577430 Helicobacter pylori Puno135 12370135 YP_005789799.1 CDS oorA NC_017379.1 577430 578557 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 577430..578557 Helicobacter pylori Puno135 12370136 YP_005789800.1 CDS oorB NC_017379.1 578559 579380 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 578559..579380 Helicobacter pylori Puno135 12370137 YP_005789801.1 CDS oorC NC_017379.1 579380 579934 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 579380..579934 Helicobacter pylori Puno135 12370138 YP_005789802.1 CDS HPPN135_02935 NC_017379.1 581972 582136 D hypothetical protein 581972..582136 Helicobacter pylori Puno135 12370139 YP_005789803.1 CDS HPPN135_02940 NC_017379.1 582145 583614 D COG1495 Disulfide bond formation protein DsbB; DsbB-like protein 582145..583614 Helicobacter pylori Puno135 12370140 YP_005789804.1 CDS HPPN135_02945 NC_017379.1 583812 583931 R hypothetical protein complement(583812..583931) Helicobacter pylori Puno135 12370141 YP_005789805.1 CDS HPPN135_02950 NC_017379.1 584089 584667 D tumor necrosis factor alpha-inducing protein 584089..584667 Helicobacter pylori Puno135 12370142 YP_005789806.1 CDS HPPN135_02955 NC_017379.1 584670 586649 R PBP-1A; COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 1A complement(584670..586649) Helicobacter pylori Puno135 12370143 YP_005789807.1 CDS HPPN135_02960 NC_017379.1 586649 587770 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase (bioF) complement(586649..587770) Helicobacter pylori Puno135 12370144 YP_005789808.1 CDS HPPN135_02965 NC_017379.1 587793 589094 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transmembrane sensory protein (MCP-like protein) complement(587793..589094) Helicobacter pylori Puno135 12370145 YP_005789809.1 CDS HPPN135_02970 NC_017379.1 589166 590668 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC-type transport system, permease and ATP-binding protein; putative membrane protein complement(589166..590668) Helicobacter pylori Puno135 12370146 YP_005789810.1 CDS HPPN135_02975 NC_017379.1 591102 592634 D COG1344 Flagellin and related hook-associated proteins; flagellin A 591102..592634 Helicobacter pylori Puno135 12370147 YP_005789811.1 CDS HPPN135_02980 NC_017379.1 592752 593408 D COG2231 Uncharacterized protein related to Endonuclease III; 3-methyladenine DNA glycosylase 592752..593408 Helicobacter pylori Puno135 12370148 YP_005789812.1 CDS HPPN135_02985 NC_017379.1 593405 594022 D hypothetical protein 593405..594022 Helicobacter pylori Puno135 12370149 YP_005789813.1 CDS hemE NC_017379.1 594091 595110 D COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 594091..595110 Helicobacter pylori Puno135 12370150 YP_005789814.1 CDS HPPN135_02995 NC_017379.1 595120 596553 D COG1538 Outer membrane protein; outer-membrane protein of the hefABC efflux system HefA 595120..596553 Helicobacter pylori Puno135 12370151 YP_005789815.1 CDS HPPN135_03000 NC_017379.1 596563 597267 D COG0845 Membrane-fusion protein; membrane fusion protein of the hefABC efflux system HefB 596563..597267 Helicobacter pylori Puno135 12370152 YP_005789816.1 CDS HPPN135_03005 NC_017379.1 597280 600357 D COG0841 Cation/multidrug efflux pump; cytoplasmic pump protein of the hefABC efflux system HefC 597280..600357 Helicobacter pylori Puno135 12370153 YP_005789817.1 CDS HPPN135_03010 NC_017379.1 600354 600923 D hypothetical protein 600354..600923 Helicobacter pylori Puno135 12370154 YP_005789818.1 CDS HPPN135_03015 NC_017379.1 601075 610569 D putative vacuolating cytotoxin (VacA)-like protein 601075..610569 Helicobacter pylori Puno135 12370155 YP_005789819.1 CDS HPPN135_03020 NC_017379.1 610628 611383 R COG0842 ABC-type multidrug transport system, permease component; hypothetical protein complement(610628..611383) Helicobacter pylori Puno135 12370156 YP_005789820.1 CDS HPPN135_03025 NC_017379.1 611383 611697 R COG1131 ABC-type multidrug transport system, ATPase component; putative abc transporter, ATP-binding protein complement(611383..611697) Helicobacter pylori Puno135 12370157 YP_005789821.1 CDS HPPN135_03030 NC_017379.1 612379 612711 R hypothetical protein complement(612379..612711) Helicobacter pylori Puno135 12370158 YP_005789822.1 CDS ligA NC_017379.1 612836 614806 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(612836..614806) Helicobacter pylori Puno135 12370159 YP_005789823.1 CDS HPPN135_03040 NC_017379.1 614884 615825 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein 614884..615825 Helicobacter pylori Puno135 12370160 YP_005789824.1 CDS aspS NC_017379.1 615860 617593 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 615860..617593 Helicobacter pylori Puno135 12370161 YP_005789825.1 CDS adk NC_017379.1 617610 618185 D COG0563 Adenylate kinase and related kinases; adenylate kinase 617610..618185 Helicobacter pylori Puno135 12370162 YP_005789826.1 CDS HPPN135_03055 NC_017379.1 618210 619208 D COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 618210..619208 Helicobacter pylori Puno135 12370163 YP_005789827.1 CDS HPPN135_03060 NC_017379.1 619261 619812 D COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 619261..619812 Helicobacter pylori Puno135 12370164 YP_005789828.1 CDS HPPN135_03065 NC_017379.1 619809 620585 D putative lipopolysaccharide biosynthesis protein 619809..620585 Helicobacter pylori Puno135 12370165 YP_005789829.1 CDS HPPN135_03070 NC_017379.1 620641 621162 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 620641..621162 Helicobacter pylori Puno135 12370166 YP_005789830.1 CDS HPPN135_03075 NC_017379.1 621310 623559 R COG1193 Mismatch repair ATPase (MutS family); recombination and DNA strand exchange inhibitor protein complement(621310..623559) Helicobacter pylori Puno135 12370167 YP_005789831.1 CDS HPPN135_03080 NC_017379.1 623588 623953 R hypothetical protein complement(623588..623953) Helicobacter pylori Puno135 12370168 YP_005789832.1 CDS murC NC_017379.1 623953 625302 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(623953..625302) Helicobacter pylori Puno135 12370169 YP_005789833.1 CDS HPPN135_03090 NC_017379.1 625295 626422 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(625295..626422) Helicobacter pylori Puno135 12370170 YP_005789834.1 CDS ispG NC_017379.1 626542 627621 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 626542..627621 Helicobacter pylori Puno135 12370171 YP_005789835.1 CDS HPPN135_03100 NC_017379.1 627624 628829 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 627624..628829 Helicobacter pylori Puno135 12370172 YP_005789836.1 CDS HPPN135_03105 NC_017379.1 628841 629899 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 628841..629899 Helicobacter pylori Puno135 12370173 YP_005789837.1 CDS HPPN135_03110 NC_017379.1 630017 632062 D COG1479 Uncharacterized conserved protein; hypothetical protein 630017..632062 Helicobacter pylori Puno135 12370174 YP_005789838.1 CDS HPPN135_03115 NC_017379.1 632111 632695 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); modulator of drug activity complement(632111..632695) Helicobacter pylori Puno135 12370175 YP_005789839.1 CDS HPPN135_03120 NC_017379.1 632826 633980 D COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase (NiFe) small subunit HydA 632826..633980 Helicobacter pylori Puno135 12370176 YP_005789840.1 CDS HPPN135_03125 NC_017379.1 633990 635726 D COG0374 Ni,Fe-hydrogenase I large subunit; nickel-dependent hydrogenase, large subunit 633990..635726 Helicobacter pylori Puno135 12370177 YP_005789841.1 CDS HPPN135_03130 NC_017379.1 635739 636413 D COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 635739..636413 Helicobacter pylori Puno135 12370178 YP_005789842.1 CDS HPPN135_03135 NC_017379.1 636410 636946 D COG0680 Ni,Fe-hydrogenase maturation factor; Hydrogenase expression/formation protein 636410..636946 Helicobacter pylori Puno135 12370179 YP_005789843.1 CDS HPPN135_03140 NC_017379.1 636948 638486 D hypothetical protein 636948..638486 Helicobacter pylori Puno135 12370180 YP_005789844.1 CDS HPPN135_03145 NC_017379.1 638491 638904 R hypothetical protein complement(638491..638904) Helicobacter pylori Puno135 12370181 YP_005789845.1 CDS HPPN135_03150 NC_017379.1 639029 639481 R hypothetical protein complement(639029..639481) Helicobacter pylori Puno135 12370182 YP_005789846.1 CDS HPPN135_03155 NC_017379.1 639662 640576 D COG1012 NAD-dependent aldehyde dehydrogenases; outer membrane protein HopH 639662..640576 Helicobacter pylori Puno135 12370183 YP_005789847.1 CDS HPPN135_03160 NC_017379.1 640641 641321 R COG0603 Predicted PP-loop superfamily ATPase; ExsB trans-regulatory protein complement(640641..641321) Helicobacter pylori Puno135 12370184 YP_005789848.1 CDS HPPN135_03165 NC_017379.1 641383 642606 D poly(A) polymerase; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polynucleotide adenylyltransferase 641383..642606 Helicobacter pylori Puno135 12370185 YP_005789849.1 CDS HPPN135_03170 NC_017379.1 642700 643353 D COG0778 Nitroreductase; NAD(P)H-flavin oxidoreductase 642700..643353 Helicobacter pylori Puno135 12370186 YP_005789850.1 CDS HPPN135_03175 NC_017379.1 643520 644839 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamylglutaminyl-tRNA synthetase 643520..644839 Helicobacter pylori Puno135 12370187 YP_005789851.1 CDS HPPN135_03180 NC_017379.1 644836 645129 D COG0762 Predicted integral membrane protein; hypothetical protein 644836..645129 Helicobacter pylori Puno135 12370188 YP_005789852.1 CDS HPPN135_03185 NC_017379.1 645138 646820 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); soluble lytic murein transglycosylase 645138..646820 Helicobacter pylori Puno135 12370189 YP_005789853.1 CDS HPPN135_03190 NC_017379.1 646817 647638 D COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 646817..647638 Helicobacter pylori Puno135 12370190 YP_005789854.1 CDS HPPN135_03195 NC_017379.1 647650 648057 D hypothetical protein 647650..648057 Helicobacter pylori Puno135 12370191 YP_005789855.1 CDS HPPN135_03200 NC_017379.1 648060 649328 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 648060..649328 Helicobacter pylori Puno135 12370192 YP_005789856.1 CDS aspA NC_017379.1 649386 650792 D COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 649386..650792 Helicobacter pylori Puno135 12370193 YP_005789857.1 CDS HPPN135_03210 NC_017379.1 650849 651427 D COG1573 Uracil-DNA glycosylase; hypothetical protein 650849..651427 Helicobacter pylori Puno135 12370194 YP_005789858.1 CDS HPPN135_03215 NC_017379.1 651436 652632 R alpha-(1,3)-fucosyltransferase complement(651436..652632) Helicobacter pylori Puno135 12370195 YP_005789859.1 CDS HPPN135_03220 NC_017379.1 652763 653386 R COG0560 Phosphoserine phosphatase; phosphoserine phosphatase complement(652763..653386) Helicobacter pylori Puno135 12370196 YP_005789860.1 CDS HPPN135_03225 NC_017379.1 653402 653905 R COG1528 Ferritin-like protein; ferritin complement(653402..653905) Helicobacter pylori Puno135 12370197 YP_005789861.1 CDS HPPN135_03230 NC_017379.1 654200 655282 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 654200..655282 Helicobacter pylori Puno135 12370198 YP_005789862.1 CDS HPPN135_03235 NC_017379.1 655455 658100 D COG4775 Outer membrane protein/protective antigen OMA87; protective surface antigen D15 655455..658100 Helicobacter pylori Puno135 12370199 YP_005789863.1 CDS HPPN135_03240 NC_017379.1 658102 659163 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 658102..659163 Helicobacter pylori Puno135 12370200 YP_005789864.1 CDS HPPN135_03245 NC_017379.1 659166 660464 D COG0612 Predicted Zn-dependent peptidases; processing protease 659166..660464 Helicobacter pylori Puno135 12370201 YP_005789865.1 CDS gatB NC_017379.1 660464 661888 D COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 660464..661888 Helicobacter pylori Puno135 12370202 YP_005789866.1 CDS HPPN135_03255 NC_017379.1 661888 663108 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 661888..663108 Helicobacter pylori Puno135 12370203 YP_005789867.1 CDS HPPN135_03260 NC_017379.1 663119 664135 D COG2956 Predicted N-acetylglucosaminyl transferase; hypothetical protein 663119..664135 Helicobacter pylori Puno135 12370204 YP_005789868.1 CDS rnhA NC_017379.1 664122 664586 D COG0328 Ribonuclease HI; ribonuclease H 664122..664586 Helicobacter pylori Puno135 12370205 YP_005789869.1 CDS rnc NC_017379.1 664561 665277 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 664561..665277 Helicobacter pylori Puno135 12370206 YP_005789870.1 CDS HPPN135_03275 NC_017379.1 665274 666371 D COG0082 Chorismate synthase; chorismate synthase 665274..666371 Helicobacter pylori Puno135 12370207 YP_005789871.1 CDS HPPN135_03280 NC_017379.1 666409 666924 D hypothetical protein 666409..666924 Helicobacter pylori Puno135 12370208 YP_005789872.1 CDS HPPN135_03285 NC_017379.1 666924 668297 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 666924..668297 Helicobacter pylori Puno135 12370209 YP_005789873.1 CDS HPPN135_03290 NC_017379.1 668294 669583 D COG0247 Fe-S oxidoreductase; anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) 668294..669583 Helicobacter pylori Puno135 12370210 YP_005789874.1 CDS HPPN135_03295 NC_017379.1 669660 671177 D COG4889 Predicted helicase; hypothetical protein 669660..671177 Helicobacter pylori Puno135 12370211 YP_005789875.1 CDS HPPN135_03300 NC_017379.1 671135 674488 D COG4889 Predicted helicase; hypothetical protein 671135..674488 Helicobacter pylori Puno135 12370212 YP_005789876.1 CDS HPPN135_03305 NC_017379.1 674636 675448 D outer membrane protein HorF 674636..675448 Helicobacter pylori Puno135 12370213 YP_005789877.1 CDS HPPN135_03310 NC_017379.1 675607 676779 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase 675607..676779 Helicobacter pylori Puno135 12370214 YP_005789878.1 CDS HPPN135_03315 NC_017379.1 676924 677754 D hypothetical protein 676924..677754 Helicobacter pylori Puno135 12370215 YP_005789879.1 CDS HPPN135_03320 NC_017379.1 677761 678828 D COG0582 Integrase; phage integrase family site specific recombinase 677761..678828 Helicobacter pylori Puno135 12370216 YP_005789880.1 CDS HPPN135_03325 NC_017379.1 678891 679397 R COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(678891..679397) Helicobacter pylori Puno135 12370217 YP_005789881.1 CDS HPPN135_03330 NC_017379.1 679401 680168 R COG0730 Predicted permeases; hypothetical protein complement(679401..680168) Helicobacter pylori Puno135 12370218 YP_005789882.1 CDS HPPN135_03335 NC_017379.1 680223 681170 R COG0673 Predicted dehydrogenases and related proteins; putative lipopolysaccharide biosynthesis protein complement(680223..681170) Helicobacter pylori Puno135 12370219 YP_005789883.1 CDS HPPN135_03340 NC_017379.1 681232 683598 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(681232..683598) Helicobacter pylori Puno135 12370220 YP_005789884.1 CDS HPPN135_03345 NC_017379.1 683765 684259 R hypothetical protein complement(683765..684259) Helicobacter pylori Puno135 12370221 YP_005789885.1 CDS HPPN135_03350 NC_017379.1 684283 684645 R hypothetical protein complement(684283..684645) Helicobacter pylori Puno135 12370222 YP_005789886.1 CDS glmU NC_017379.1 684880 686181 R COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(684880..686181) Helicobacter pylori Puno135 12370223 YP_005789887.1 CDS HPPN135_03360 NC_017379.1 686138 686284 D hypothetical protein 686138..686284 Helicobacter pylori Puno135 12370224 YP_005789888.1 CDS fliP NC_017379.1 686263 687009 D COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 686263..687009 Helicobacter pylori Puno135 12370225 YP_005789889.1 CDS HPPN135_03370 NC_017379.1 687048 689351 R COG4772 Outer membrane receptor for Fe3+-dicitrate; iron(III) dicitrate transport protein complement(687048..689351) Helicobacter pylori Puno135 12370226 YP_005789890.1 CDS HPPN135_03375 NC_017379.1 689592 691520 R COG0370 Fe2+ transport system protein B; ferrous iron transport protein B complement(689592..691520) Helicobacter pylori Puno135 12370227 YP_005789891.1 CDS HPPN135_03380 NC_017379.1 691664 692476 D COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 691664..692476 Helicobacter pylori Puno135 12370228 YP_005789892.1 CDS HPPN135_03385 NC_017379.1 692531 693745 D COG0863 DNA modification methylase; putative type II cytosine specific methyltransferase 692531..693745 Helicobacter pylori Puno135 12370229 YP_005789893.1 CDS HPPN135_03390 NC_017379.1 693748 694620 D putative type II restriction enzyme 693748..694620 Helicobacter pylori Puno135 12370230 YP_005789894.1 CDS HPPN135_03395 NC_017379.1 694711 695112 D COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 694711..695112 Helicobacter pylori Puno135 12370231 YP_005789895.1 CDS HPPN135_03400 NC_017379.1 695393 696568 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 695393..696568 Helicobacter pylori Puno135 12370232 YP_005789896.1 CDS HPPN135_03405 NC_017379.1 696579 697277 D COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; succinyl-CoA-transferase subunit A 696579..697277 Helicobacter pylori Puno135 12370233 YP_005789897.1 CDS HPPN135_03410 NC_017379.1 697274 697897 D COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; succinyl-CoA-transferase subunit B 697274..697897 Helicobacter pylori Puno135 12370234 YP_005789898.1 CDS HPPN135_03415 NC_017379.1 697916 699280 D COG2031 Short chain fatty acids transporter; short-chain fatty acids transporter 697916..699280 Helicobacter pylori Puno135 12370235 YP_005789899.1 CDS HPPN135_03420 NC_017379.1 699405 700406 D COG3528 Uncharacterized protein conserved in bacteria; putative outer membrane protein 699405..700406 Helicobacter pylori Puno135 12370236 YP_005789900.1 CDS HPPN135_03425 NC_017379.1 700625 702766 D COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A 700625..702766 Helicobacter pylori Puno135 12370237 YP_005789901.1 CDS HPPN135_03430 NC_017379.1 702778 705075 D COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit; N-methylhydantoinase 702778..705075 Helicobacter pylori Puno135 12370238 YP_005789902.1 CDS HPPN135_03435 NC_017379.1 705093 705593 D COG4647 Acetone carboxylase, gamma subunit; hypothetical protein 705093..705593 Helicobacter pylori Puno135 12370239 YP_005789903.1 CDS HPPN135_03440 NC_017379.1 705902 706930 D COG1197 Transcription-repair coupling factor (superfamily II helicase); hypothetical protein 705902..706930 Helicobacter pylori Puno135 12370240 YP_005789904.1 CDS HPPN135_03445 NC_017379.1 706923 707309 D COG0818 Diacylglycerol kinase; diacylglycerol kinase 706923..707309 Helicobacter pylori Puno135 12370241 YP_005789905.1 CDS HPPN135_03450 NC_017379.1 707329 709815 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 707329..709815 Helicobacter pylori Puno135 12370242 YP_005789906.1 CDS HPPN135_03455 NC_017379.1 709815 710288 D hypothetical protein 709815..710288 Helicobacter pylori Puno135 12370243 YP_005789907.1 CDS HPPN135_03460 NC_017379.1 710285 711430 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; transcriptional activator of flagella proteins 710285..711430 Helicobacter pylori Puno135 12370244 YP_005789908.1 CDS HPPN135_03465 NC_017379.1 711593 711871 D hypothetical protein 711593..711871 Helicobacter pylori Puno135 12370245 YP_005789909.1 CDS uvrA NC_017379.1 712058 714883 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(712058..714883) Helicobacter pylori Puno135 12370246 YP_005789910.1 CDS HPPN135_03475 NC_017379.1 715058 715879 D outer membrane protein HopE 715058..715879 Helicobacter pylori Puno135 12370247 YP_005789911.1 CDS HPPN135_03480 NC_017379.1 716072 716998 D COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltranserfase 716072..716998 Helicobacter pylori Puno135 12370248 YP_005789912.1 CDS HPPN135_03485 NC_017379.1 717018 717362 D hypothetical protein 717018..717362 Helicobacter pylori Puno135 12370249 YP_005789913.1 CDS HPPN135_03490 NC_017379.1 717607 718509 D COG1912 Uncharacterized conserved protein; hypothetical protein 717607..718509 Helicobacter pylori Puno135 12370250 YP_005789914.1 CDS HPPN135_03495 NC_017379.1 718943 720163 D COG1896 Predicted hydrolases of HD superfamily; hypothetical protein 718943..720163 Helicobacter pylori Puno135 12370251 YP_005789915.1 CDS HPPN135_03500 NC_017379.1 720275 721519 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(720275..721519) Helicobacter pylori Puno135 12370252 YP_005789916.1 CDS HPPN135_03505 NC_017379.1 721522 722244 R COG1137 ABC-type (unclassified) transport system, ATPase component; putative abc transporter, ATP-binding protein complement(721522..722244) Helicobacter pylori Puno135 12370253 YP_005789917.1 CDS HPPN135_03510 NC_017379.1 722257 722658 R COG0802 Predicted ATPase or kinase; hypothetical protein complement(722257..722658) Helicobacter pylori Puno135 12370254 YP_005789918.1 CDS HPPN135_03515 NC_017379.1 722655 724376 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(722655..724376) Helicobacter pylori Puno135 12370255 YP_005789919.1 CDS HPPN135_03520 NC_017379.1 724455 725078 R COG1279 Lysine efflux permease; hypothetical protein complement(724455..725078) Helicobacter pylori Puno135 12370256 YP_005789920.1 CDS HPPN135_03525 NC_017379.1 725344 725766 D hypothetical protein 725344..725766 Helicobacter pylori Puno135 12370257 YP_005789921.1 CDS HPPN135_03530 NC_017379.1 725795 726253 D hypothetical protein 725795..726253 Helicobacter pylori Puno135 12370258 YP_005789922.1 CDS HPPN135_03535 NC_017379.1 726527 727519 R COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II complement(726527..727519) Helicobacter pylori Puno135 12370259 YP_005789923.1 CDS HPPN135_03540 NC_017379.1 727649 728980 D COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 727649..728980 Helicobacter pylori Puno135 12370260 YP_005789924.1 CDS HPPN135_03545 NC_017379.1 729056 731005 R putative Outer membrane protein complement(729056..731005) Helicobacter pylori Puno135 12370261 YP_005789925.1 CDS HPPN135_03550 NC_017379.1 731204 732121 R outer membrane protein complement(731204..732121) Helicobacter pylori Puno135 12370262 YP_005789926.1 CDS HPPN135_03555 NC_017379.1 732091 733077 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B complement(732091..733077) Helicobacter pylori Puno135 12370263 YP_005789927.1 CDS HPPN135_03560 NC_017379.1 733171 734187 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase complement(733171..734187) Helicobacter pylori Puno135 12370264 YP_005789928.1 CDS HPPN135_03565 NC_017379.1 734218 735285 R hypothetical protein complement(734218..735285) Helicobacter pylori Puno135 12370265 YP_005789929.1 CDS HPPN135_03570 NC_017379.1 735294 735599 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(735294..735599) Helicobacter pylori Puno135 12370266 YP_005789930.1 CDS HPPN135_03575 NC_017379.1 735705 735959 R hypothetical protein complement(735705..735959) Helicobacter pylori Puno135 12370267 YP_005789931.1 CDS HPPN135_03580 NC_017379.1 735925 736941 R hypothetical protein complement(735925..736941) Helicobacter pylori Puno135 12370268 YP_005789932.1 CDS HPPN135_03585 NC_017379.1 736958 737425 R COG0218 Predicted GTPase; hypothetical protein complement(736958..737425) Helicobacter pylori Puno135 12370269 YP_005789933.1 CDS HPPN135_03610 NC_017379.1 739030 739275 R hypothetical protein complement(739030..739275) Helicobacter pylori Puno135 12370270 YP_005789934.1 CDS HPPN135_03615 NC_017379.1 739373 740692 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(739373..740692) Helicobacter pylori Puno135 12370271 YP_005789935.1 CDS HPPN135_03620 NC_017379.1 740694 741155 R COG2236 Predicted phosphoribosyltransferases; putative nucleotide phosphoribosyltransferase complement(740694..741155) Helicobacter pylori Puno135 12370272 YP_005789936.1 CDS HPPN135_03625 NC_017379.1 741164 742273 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; putative aminotransferase complement(741164..742273) Helicobacter pylori Puno135 12370273 YP_005789937.1 CDS HPPN135_03630 NC_017379.1 742422 742898 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidyl glycerophosphatase A 742422..742898 Helicobacter pylori Puno135 12370274 YP_005789938.1 CDS ddl NC_017379.1 742975 744018 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 742975..744018 Helicobacter pylori Puno135 12370275 YP_005789939.1 CDS HPPN135_03640 NC_017379.1 744018 744743 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 744018..744743 Helicobacter pylori Puno135 12370276 YP_005789940.1 CDS HPPN135_03645 NC_017379.1 744730 746211 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; putative membrane protein 744730..746211 Helicobacter pylori Puno135 12370277 YP_005789941.1 CDS HPPN135_03650 NC_017379.1 746221 746706 D COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; histidine triad (HIT) family protein 746221..746706 Helicobacter pylori Puno135 12370278 YP_005789942.1 CDS HPPN135_03655 NC_017379.1 746798 747727 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 746798..747727 Helicobacter pylori Puno135 12370279 YP_005789943.1 CDS HPPN135_03660 NC_017379.1 747817 748962 R COG0772 Bacterial cell division membrane protein; Rod shape-determining protein RodA; putative membrane protein complement(747817..748962) Helicobacter pylori Puno135 12370281 YP_005789944.1 CDS HPPN135_03675 NC_017379.1 750351 751334 D COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 750351..751334 Helicobacter pylori Puno135 12370282 YP_005789945.1 CDS HPPN135_03680 NC_017379.1 751285 752544 D COG3401 Fibronectin type 3 domain-containing protein; hypothetical protein 751285..752544 Helicobacter pylori Puno135 12370283 YP_005789946.1 CDS HPPN135_03685 NC_017379.1 752555 753736 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 752555..753736 Helicobacter pylori Puno135 12370284 YP_005789947.1 CDS HPPN135_03690 NC_017379.1 753733 754404 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; cell division protein FtsE 753733..754404 Helicobacter pylori Puno135 12370285 YP_005789948.1 CDS HPPN135_03695 NC_017379.1 754391 755197 D COG2177 Cell division protein; cell division protein FtsX 754391..755197 Helicobacter pylori Puno135 12370286 YP_005789949.1 CDS HPPN135_03700 NC_017379.1 755190 756392 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 755190..756392 Helicobacter pylori Puno135 12370287 YP_005789950.1 CDS HPPN135_03705 NC_017379.1 756491 756850 D COG1334 Uncharacterized flagellar protein FlaG; flagellar protein FlaG 756491..756850 Helicobacter pylori Puno135 12370288 YP_005789951.1 CDS fliD NC_017379.1 756867 758924 D COG1345 Flagellar capping protein; flagellar capping protein 756867..758924 Helicobacter pylori Puno135 12370289 YP_005789952.1 CDS fliS NC_017379.1 758970 759350 D COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 758970..759350 Helicobacter pylori Puno135 12370290 YP_005789953.1 CDS HPPN135_03720 NC_017379.1 759337 759576 D hypothetical protein 759337..759576 Helicobacter pylori Puno135 12370291 YP_005789954.1 CDS HPPN135_03725 NC_017379.1 759629 760288 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; molybdopterin biosynthesis protein 759629..760288 Helicobacter pylori Puno135 12370292 YP_005789955.1 CDS HPPN135_03730 NC_017379.1 760317 760463 D hypothetical protein 760317..760463 Helicobacter pylori Puno135 12370293 YP_005789956.1 CDS HPPN135_03735 NC_017379.1 760467 761348 D COG0388 Predicted amidohydrolase; carbon-nitrogen hydrolase 760467..761348 Helicobacter pylori Puno135 12370294 YP_005789957.1 CDS HPPN135_03740 NC_017379.1 761456 762769 D COG2056 Predicted permease; hypothetical protein 761456..762769 Helicobacter pylori Puno135 12370295 YP_005789958.1 CDS HPPN135_03745 NC_017379.1 762832 764085 D COG0534 Na+-driven multidrug efflux pump; hypothetical protein 762832..764085 Helicobacter pylori Puno135 12370296 YP_005789959.1 CDS HPPN135_03750 NC_017379.1 764086 765597 R COG1418 Predicted HD superfamily hydrolase; phosphodiesterase complement(764086..765597) Helicobacter pylori Puno135 12370297 YP_005789960.1 CDS HPPN135_03755 NC_017379.1 765575 766219 R COG0212 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein complement(765575..766219) Helicobacter pylori Puno135 12370298 YP_005789961.1 CDS HPPN135_03760 NC_017379.1 766344 766901 D hypothetical protein 766344..766901 Helicobacter pylori Puno135 12370299 YP_005789962.1 CDS HPPN135_03765 NC_017379.1 766908 767801 D COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 766908..767801 Helicobacter pylori Puno135 12370300 YP_005789963.1 CDS HPPN135_03770 NC_017379.1 767810 768124 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(767810..768124) Helicobacter pylori Puno135 12370301 YP_005789964.1 CDS HPPN135_03775 NC_017379.1 768182 769222 R hypothetical protein complement(768182..769222) Helicobacter pylori Puno135 12370302 YP_005789965.1 CDS HPPN135_03780 NC_017379.1 769546 770397 R COG1196 Chromosome segregation ATPases; hypothetical protein complement(769546..770397) Helicobacter pylori Puno135 12370303 YP_005789966.1 CDS moaA NC_017379.1 770680 771645 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(770680..771645) Helicobacter pylori Puno135 12370304 YP_005789967.1 CDS HPPN135_03790 NC_017379.1 771731 772336 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 771731..772336 Helicobacter pylori Puno135 12370305 YP_005789968.1 CDS flhB NC_017379.1 772329 773405 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 772329..773405 Helicobacter pylori Puno135 12370306 YP_005789969.1 CDS HPPN135_03800 NC_017379.1 773478 774215 R hypothetical protein complement(773478..774215) Helicobacter pylori Puno135 12370307 YP_005789970.1 CDS HPPN135_03805 NC_017379.1 774234 775556 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(774234..775556) Helicobacter pylori Puno135 12370308 YP_005789971.1 CDS HPPN135_03810 NC_017379.1 775563 776654 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(775563..776654) Helicobacter pylori Puno135 12370309 YP_005789972.1 CDS HPPN135_03815 NC_017379.1 776665 777873 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(776665..777873) Helicobacter pylori Puno135 12370310 YP_005789973.1 CDS HPPN135_03820 NC_017379.1 777894 780224 R COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) complement(777894..780224) Helicobacter pylori Puno135 12370311 YP_005789974.1 CDS rpoZ NC_017379.1 780211 780435 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(780211..780435) Helicobacter pylori Puno135 12370312 YP_005789975.1 CDS pyrH NC_017379.1 780478 781200 R COG0528 Uridylate kinase; uridylate kinase complement(780478..781200) Helicobacter pylori Puno135 12370313 YP_005789976.1 CDS HPPN135_03835 NC_017379.1 781310 781993 R COG1427 Predicted periplasmic solute-binding protein; hypothetical protein complement(781310..781993) Helicobacter pylori Puno135 12370314 YP_005789977.1 CDS HPPN135_03840 NC_017379.1 782123 784681 D COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 782123..784681 Helicobacter pylori Puno135 12370315 YP_005789978.1 CDS HPPN135_03845 NC_017379.1 784758 785024 D hypothetical protein 784758..785024 Helicobacter pylori Puno135 12370316 YP_005789979.1 CDS HPPN135_03850 NC_017379.1 785286 786575 D hypothetical protein 785286..786575 Helicobacter pylori Puno135 12370317 YP_005789980.1 CDS HPPN135_03855 NC_017379.1 786669 788036 D putative Outer membrane protein 786669..788036 Helicobacter pylori Puno135 12370318 YP_005789981.1 CDS HPPN135_03860 NC_017379.1 788043 788570 R hypothetical protein complement(788043..788570) Helicobacter pylori Puno135 12370319 YP_005789982.1 CDS lolA NC_017379.1 789063 789617 R COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone complement(789063..789617) Helicobacter pylori Puno135 12370320 YP_005789983.1 CDS HPPN135_03870 NC_017379.1 789764 792361 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 789764..792361 Helicobacter pylori Puno135 12370321 YP_005789984.1 CDS HPPN135_03875 NC_017379.1 792351 793583 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein release system transmembrane protein 792351..793583 Helicobacter pylori Puno135 12370322 YP_005789985.1 CDS HPPN135_03880 NC_017379.1 793862 795361 D outer membrane protein HofF 793862..795361 Helicobacter pylori Puno135 12370323 YP_005789986.1 CDS HPPN135_03885 NC_017379.1 795485 796237 R hypothetical protein complement(795485..796237) Helicobacter pylori Puno135 12370324 YP_005789987.1 CDS HPPN135_03890 NC_017379.1 796224 797441 R COG0270 Site-specific DNA methylase; site-specific DNA methylase complement(796224..797441) Helicobacter pylori Puno135 12370325 YP_005789988.1 CDS HPPN135_03895 NC_017379.1 797477 799537 R COG2217 Cation transport ATPase; cadmium, zinc and cobalt-transporting ATPase complement(797477..799537) Helicobacter pylori Puno135 12370326 YP_005789989.1 CDS HPPN135_03900 NC_017379.1 799562 801082 R COG0606 Predicted ATPase with chaperone activity; magnesium chelatase family protein complement(799562..801082) Helicobacter pylori Puno135 12370327 YP_005789990.1 CDS def NC_017379.1 801085 801612 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(801085..801612) Helicobacter pylori Puno135 12370328 YP_005789991.1 CDS clpP NC_017379.1 801617 802204 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(801617..802204) Helicobacter pylori Puno135 12370329 YP_005789992.1 CDS tig NC_017379.1 802225 803580 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(802225..803580) Helicobacter pylori Puno135 12370330 YP_005789993.1 CDS HPPN135_03920 NC_017379.1 803693 804529 R outer membrane protein (omp18) complement(803693..804529) Helicobacter pylori Puno135 12370331 YP_005789994.1 CDS HPPN135_03925 NC_017379.1 804555 805337 R Neuraminyllactose-binding hemagglutinin HpaA complement(804555..805337) Helicobacter pylori Puno135 12370332 YP_005789995.1 CDS moaC NC_017379.1 805456 805932 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(805456..805932) Helicobacter pylori Puno135 12370333 YP_005789996.1 CDS mogA NC_017379.1 805943 806473 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA complement(805943..806473) Helicobacter pylori Puno135 12370334 YP_005789997.1 CDS HPPN135_03940 NC_017379.1 806486 806923 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin converting factor subunit 2 complement(806486..806923) Helicobacter pylori Puno135 12370335 YP_005789998.1 CDS HPPN135_03945 NC_017379.1 806924 807145 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin converting factor, subunit 1 (moaD) complement(806924..807145) Helicobacter pylori Puno135 12370336 YP_005789999.1 CDS ribA NC_017379.1 807219 807797 R COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II complement(807219..807797) Helicobacter pylori Puno135 12370337 YP_005790000.1 CDS HPPN135_03955 NC_017379.1 808628 808765 R hypothetical protein complement(808628..808765) Helicobacter pylori Puno135 12370338 YP_005790001.1 CDS HPPN135_03960 NC_017379.1 808842 809876 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(808842..809876) Helicobacter pylori Puno135 12370339 YP_005790002.1 CDS HPPN135_03965 NC_017379.1 809959 810795 R COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein complement(809959..810795) Helicobacter pylori Puno135 12370340 YP_005790003.1 CDS HPPN135_03970 NC_017379.1 810877 811497 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 810877..811497 Helicobacter pylori Puno135 12370341 YP_005790004.1 CDS acpS NC_017379.1 811573 811932 R COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase complement(811573..811932) Helicobacter pylori Puno135 12370342 YP_005790005.1 CDS fliL NC_017379.1 811939 812490 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(811939..812490) Helicobacter pylori Puno135 12370343 YP_005790006.1 CDS HPPN135_03985 NC_017379.1 812499 813101 R COG0742 N6-adenine-specific methylase; hypothetical protein complement(812499..813101) Helicobacter pylori Puno135 12370344 YP_005790007.1 CDS HPPN135_03990 NC_017379.1 813080 813406 R hypothetical protein complement(813080..813406) Helicobacter pylori Puno135 12370345 YP_005790008.1 CDS HPPN135_03995 NC_017379.1 813850 814857 R COG1565 Uncharacterized conserved protein; hypothetical protein complement(813850..814857) Helicobacter pylori Puno135 12370346 YP_005790009.1 CDS HPPN135_04000 NC_017379.1 814990 815607 D COG0491 Zn-dependent hydrolases, including glyoxylases; hypothetical protein 814990..815607 Helicobacter pylori Puno135 12370347 YP_005790010.1 CDS HPPN135_04005 NC_017379.1 815608 816381 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamin biosynthesis protein (thiF) 815608..816381 Helicobacter pylori Puno135 12370348 YP_005790011.1 CDS HPPN135_04010 NC_017379.1 816392 817165 D COG1291 Flagellar motor component; flagellar motor protein MotA 816392..817165 Helicobacter pylori Puno135 12370349 YP_005790012.1 CDS motB NC_017379.1 817168 817935 D COG1360 Flagellar motor protein; flagellar motor protein MotB 817168..817935 Helicobacter pylori Puno135 12370350 YP_005790013.1 CDS HPPN135_04020 NC_017379.1 817939 818388 D hypothetical protein 817939..818388 Helicobacter pylori Puno135 12370351 YP_005790014.1 CDS HPPN135_04025 NC_017379.1 818569 820230 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; osmoprotection protein (proWX) 818569..820230 Helicobacter pylori Puno135 12370352 YP_005790015.1 CDS HPPN135_04030 NC_017379.1 820234 820875 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; osmoprotection protein (proV) 820234..820875 Helicobacter pylori Puno135 12370353 YP_005790016.1 CDS HPPN135_04035 NC_017379.1 821058 821519 D hypothetical protein 821058..821519 Helicobacter pylori Puno135 12370354 YP_005790017.1 CDS uvrC NC_017379.1 821520 823304 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 821520..823304 Helicobacter pylori Puno135 12370355 YP_005790018.1 CDS HPPN135_04045 NC_017379.1 823315 824580 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 823315..824580 Helicobacter pylori Puno135 12370356 YP_005790019.1 CDS HPPN135_04050 NC_017379.1 824581 824925 D COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 824581..824925 Helicobacter pylori Puno135 12370357 YP_005790020.1 CDS HPPN135_04055 NC_017379.1 825014 825334 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 825014..825334 Helicobacter pylori Puno135 12370358 YP_005790021.1 CDS HPPN135_04060 NC_017379.1 825340 826275 D COG0492 Thioredoxin reductase; thioredoxin reductase 825340..826275 Helicobacter pylori Puno135 12370359 YP_005790022.1 CDS HPPN135_04065 NC_017379.1 826442 827263 D COG3306 Glycosyltransferase involved in LPS biosynthesis; lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) 826442..827263 Helicobacter pylori Puno135 12370360 YP_005790023.1 CDS HPPN135_04070 NC_017379.1 827469 827717 R COG0724 RNA-binding proteins (RRM domain); RNA binding protein complement(827469..827717) Helicobacter pylori Puno135 12370361 YP_005790024.1 CDS HPPN135_04075 NC_017379.1 828034 828714 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(828034..828714) Helicobacter pylori Puno135 12370362 YP_005790025.1 CDS HPPN135_04080 NC_017379.1 828836 830281 R COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase complement(828836..830281) Helicobacter pylori Puno135 12370363 YP_005790026.1 CDS gatA NC_017379.1 830291 831652 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(830291..831652) Helicobacter pylori Puno135 12370364 YP_005790027.1 CDS coaE NC_017379.1 831711 832301 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(831711..832301) Helicobacter pylori Puno135 12370365 YP_005790028.1 CDS speE NC_017379.1 832303 833091 R COG0421 Spermidine synthase; spermidine synthase complement(832303..833091) Helicobacter pylori Puno135 12370366 YP_005790029.1 CDS HPPN135_04100 NC_017379.1 833176 834054 R hypothetical protein complement(833176..834054) Helicobacter pylori Puno135 12370367 YP_005790030.1 CDS HPPN135_04105 NC_017379.1 834131 835519 D COG1160 Predicted GTPases; GTP-binding protein Der 834131..835519 Helicobacter pylori Puno135 12370368 YP_005790031.1 CDS HPPN135_04110 NC_017379.1 835657 835947 D COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 835657..835947 Helicobacter pylori Puno135 12370369 YP_005790032.1 CDS HPPN135_04115 NC_017379.1 836619 837224 D COG3018 Uncharacterized protein conserved in bacteria; hypothetical protein 836619..837224 Helicobacter pylori Puno135 12370371 YP_005790033.1 CDS HPPN135_04120 NC_017379.1 837243 837860 D hypothetical protein 837243..837860 Helicobacter pylori Puno135 12370372 YP_005790034.1 CDS HPPN135_04125 NC_017379.1 837857 839620 D COG2067 Long-chain fatty acid transport protein; outer membrane protein P1 837857..839620 Helicobacter pylori Puno135 12370373 YP_005790035.1 CDS HPPN135_04130 NC_017379.1 839624 840607 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; UDP-GlcNAc C6 dehydratase 839624..840607 Helicobacter pylori Puno135 12370374 YP_005790036.1 CDS HPPN135_04135 NC_017379.1 840604 841881 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 840604..841881 Helicobacter pylori Puno135 12370375 YP_005790037.1 CDS HPPN135_04140 NC_017379.1 841881 842618 D hypothetical protein 841881..842618 Helicobacter pylori Puno135 12370376 YP_005790038.1 CDS HPPN135_04145 NC_017379.1 842625 843737 R bifunctional alpha-2,3/-2,8-sialyltransferase complement(842625..843737) Helicobacter pylori Puno135 12370377 YP_005790039.1 CDS HPPN135_04150 NC_017379.1 843734 844780 R bifunctional alpha-2,3/-2,8-sialyltransferase complement(843734..844780) Helicobacter pylori Puno135 12370378 YP_005790040.1 CDS HPPN135_04155 NC_017379.1 844777 845430 R COG1083 CMP-N-acetylneuraminic acid synthetase; N-acylneuraminate cytidylyltransferase complement(844777..845430) Helicobacter pylori Puno135 12370379 YP_005790041.1 CDS HPPN135_04160 NC_017379.1 845427 846656 R COG0381 UDP-N-acetylglucosamine 2-epimerase; hypothetical protein complement(845427..846656) Helicobacter pylori Puno135 12370380 YP_005790042.1 CDS HPPN135_04165 NC_017379.1 846666 847703 R COG2089 Sialic acid synthase; N-acetylneuraminic acid synthetase complement(846666..847703) Helicobacter pylori Puno135 12370381 YP_005790043.1 CDS HPPN135_04170 NC_017379.1 847769 850351 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(847769..850351) Helicobacter pylori Puno135 12370382 YP_005790044.1 CDS HPPN135_04175 NC_017379.1 850361 850549 D hypothetical protein 850361..850549 Helicobacter pylori Puno135 12370383 YP_005790045.1 CDS HPPN135_04180 NC_017379.1 850642 850743 R hypothetical protein complement(850642..850743) Helicobacter pylori Puno135 12370384 YP_005790046.1 CDS thiE NC_017379.1 850841 851500 R COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(850841..851500) Helicobacter pylori Puno135 12370385 YP_005790047.1 CDS HPPN135_04190 NC_017379.1 851493 852302 R COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; thiamine biosynthesis protein (thi) complement(851493..852302) Helicobacter pylori Puno135 12370386 YP_005790048.1 CDS HPPN135_04195 NC_017379.1 852299 853078 R COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase complement(852299..853078) Helicobacter pylori Puno135 12370387 YP_005790049.1 CDS HPPN135_04200 NC_017379.1 853250 853624 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(853250..853624) Helicobacter pylori Puno135 12370388 YP_005790050.1 CDS HPPN135_04205 NC_017379.1 853807 854790 D COG0270 Site-specific DNA methylase; site-specific DNA methyltransferase 853807..854790 Helicobacter pylori Puno135 12370389 YP_005790051.1 CDS HPPN135_04210 NC_017379.1 854787 855740 D type II restriction endonuclease 854787..855740 Helicobacter pylori Puno135 12370390 YP_005790052.1 CDS HPPN135_04215 NC_017379.1 855906 856583 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 855906..856583 Helicobacter pylori Puno135 12370391 YP_005790053.1 CDS HPPN135_04220 NC_017379.1 856614 857546 R COG2958 Uncharacterized protein conserved in bacteria; hypothetical protein complement(856614..857546) Helicobacter pylori Puno135 12370392 YP_005790054.1 CDS HPPN135_04225 NC_017379.1 857543 859144 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(857543..859144) Helicobacter pylori Puno135 12370393 YP_005790055.1 CDS HPPN135_04230 NC_017379.1 859394 860371 D COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 859394..860371 Helicobacter pylori Puno135 12370394 YP_005790056.1 CDS HPPN135_04235 NC_017379.1 860549 861127 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(860549..861127) Helicobacter pylori Puno135 12370395 YP_005790057.1 CDS HPPN135_04240 NC_017379.1 861120 862511 R COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; ADP-heptose synthase complement(861120..862511) Helicobacter pylori Puno135 12370396 YP_005790058.1 CDS HPPN135_04245 NC_017379.1 862508 863500 R COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase complement(862508..863500) Helicobacter pylori Puno135 12370397 YP_005790059.1 CDS HPPN135_04250 NC_017379.1 863509 864033 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(863509..864033) Helicobacter pylori Puno135 12370398 YP_005790060.1 CDS HPPN135_04255 NC_017379.1 864020 864757 R COG2836 Uncharacterized conserved protein; hypothetical protein complement(864020..864757) Helicobacter pylori Puno135 12370399 YP_005790061.1 CDS HPPN135_04260 NC_017379.1 864748 865419 R COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase complement(864748..865419) Helicobacter pylori Puno135 12370400 YP_005790062.1 CDS HPPN135_04265 NC_017379.1 865424 867064 R hypothetical protein complement(865424..867064) Helicobacter pylori Puno135 12370401 YP_005790063.1 CDS HPPN135_04270 NC_017379.1 867069 867725 R hypothetical protein complement(867069..867725) Helicobacter pylori Puno135 12370402 YP_005790064.1 CDS dut NC_017379.1 867722 868159 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(867722..868159) Helicobacter pylori Puno135 12370403 YP_005790065.1 CDS greA NC_017379.1 868149 868643 R COG0782 Transcription elongation factor; transcription elongation factor GreA complement(868149..868643) Helicobacter pylori Puno135 12370404 YP_005790066.1 CDS HPPN135_04285 NC_017379.1 868684 869766 R COG0763 Lipid A disaccharide synthetase; ipid-A-disaccharide synthase complement(868684..869766) Helicobacter pylori Puno135 12370405 YP_005790067.1 CDS HPPN135_04290 NC_017379.1 869766 870227 R hypothetical protein complement(869766..870227) Helicobacter pylori Puno135 12370406 YP_005790068.1 CDS hypA NC_017379.1 870234 870587 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(870234..870587) Helicobacter pylori Puno135 12370407 YP_005790069.1 CDS flgE NC_017379.1 870646 872802 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(870646..872802) Helicobacter pylori Puno135 12370408 YP_005790070.1 CDS HPPN135_04305 NC_017379.1 873005 873739 R COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(873005..873739) Helicobacter pylori Puno135 12370409 YP_005790071.1 CDS HPPN135_04310 NC_017379.1 874062 874391 D COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate uptake protein 874062..874391 Helicobacter pylori Puno135 12370410 YP_005790072.1 CDS HPPN135_04315 NC_017379.1 874448 874663 R hypothetical protein complement(874448..874663) Helicobacter pylori Puno135 12370411 YP_005790073.1 CDS HPPN135_04320 NC_017379.1 874744 875619 R hypothetical protein complement(874744..875619) Helicobacter pylori Puno135 12370412 YP_005790074.1 CDS HPPN135_04325 NC_017379.1 875770 877296 R COG0753 Catalase; catalase complement(875770..877296) Helicobacter pylori Puno135 12370413 YP_005790075.1 CDS HPPN135_04330 NC_017379.1 877614 879983 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 877614..879983 Helicobacter pylori Puno135 12370414 YP_005790076.1 CDS ruvC NC_017379.1 879984 880457 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(879984..880457) Helicobacter pylori Puno135 12370415 YP_005790077.1 CDS HPPN135_04340 NC_017379.1 880589 881314 D COG1432 Uncharacterized conserved protein; hypothetical protein 880589..881314 Helicobacter pylori Puno135 12370416 YP_005790078.1 CDS HPPN135_04345 NC_017379.1 881802 882458 R hypothetical protein complement(881802..882458) Helicobacter pylori Puno135 12370417 YP_005790079.1 CDS ruvA NC_017379.1 882713 883264 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(882713..883264) Helicobacter pylori Puno135 12370418 YP_005790080.1 CDS HPPN135_04355 NC_017379.1 883289 885133 R hypothetical protein complement(883289..885133) Helicobacter pylori Puno135 12370419 YP_005790081.1 CDS HPPN135_04360 NC_017379.1 885226 886686 D COG0728 Uncharacterized membrane protein, putative virulence factor; virulence factor MviN 885226..886686 Helicobacter pylori Puno135 12370420 YP_005790082.1 CDS cysS NC_017379.1 886687 888084 D COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 886687..888084 Helicobacter pylori Puno135 12370421 YP_005790083.1 CDS HPPN135_04370 NC_017379.1 888307 892191 D vacuolating cytotoxin 888307..892191 Helicobacter pylori Puno135 12370422 YP_005790084.1 CDS HPPN135_04385 NC_017379.1 893698 894465 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron(III) dicitrate transporter, ATP-binding protein complement(893698..894465) Helicobacter pylori Puno135 12370423 YP_005790085.1 CDS HPPN135_04390 NC_017379.1 894465 895445 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron(III) dicitrate ABC transporter, permease protein (fecD) complement(894465..895445) Helicobacter pylori Puno135 12370424 YP_005790086.1 CDS HPPN135_04395 NC_017379.1 895438 896286 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short chain dehydrogenase complement(895438..896286) Helicobacter pylori Puno135 12370425 YP_005790087.1 CDS HPPN135_04400 NC_017379.1 896424 896948 D COG1607 Acyl-CoA hydrolase; hypothetical protein 896424..896948 Helicobacter pylori Puno135 12370426 YP_005790088.1 CDS HPPN135_04405 NC_017379.1 897049 897315 R COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein complement(897049..897315) Helicobacter pylori Puno135 12370427 YP_005790089.1 CDS HPPN135_04410 NC_017379.1 897296 897673 R hypothetical protein complement(897296..897673) Helicobacter pylori Puno135 12370428 YP_005790090.1 CDS HPPN135_04415 NC_017379.1 897672 897770 D hypothetical protein 897672..897770 Helicobacter pylori Puno135 12370429 YP_005790091.1 CDS HPPN135_04420 NC_017379.1 897780 897899 D hypothetical protein 897780..897899 Helicobacter pylori Puno135 12370430 YP_005790092.1 CDS HPPN135_04425 NC_017379.1 897933 900173 R outer membrane protein BabA complement(897933..900173) Helicobacter pylori Puno135 12370431 YP_005790093.1 CDS HPPN135_04430 NC_017379.1 900172 900327 D hypothetical protein 900172..900327 Helicobacter pylori Puno135 12370432 YP_005790094.1 CDS HPPN135_04435 NC_017379.1 900532 901149 D hypothetical protein 900532..901149 Helicobacter pylori Puno135 12370435 YP_005790095.1 CDS HPPN135_04440 NC_017379.1 901100 902212 R COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD complement(901100..902212) Helicobacter pylori Puno135 12370436 YP_005790096.1 CDS HPPN135_04445 NC_017379.1 902225 902461 R COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone complement(902225..902461) Helicobacter pylori Puno135 12370437 YP_005790097.1 CDS HPPN135_04450 NC_017379.1 902461 903189 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase/urease nickel incorporation protein hypB complement(902461..903189) Helicobacter pylori Puno135 12370438 YP_005790098.1 CDS HPPN135_04455 NC_017379.1 903309 903431 R hypothetical protein complement(903309..903431) Helicobacter pylori Puno135 12370439 YP_005790099.1 CDS HPPN135_04460 NC_017379.1 903442 903741 R COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; hypothetical protein complement(903442..903741) Helicobacter pylori Puno135 12370440 YP_005790100.1 CDS HPPN135_04465 NC_017379.1 903752 904957 R COG0282 Acetate kinase; acetate kinase A/propionate kinase 2 complement(903752..904957) Helicobacter pylori Puno135 12370441 YP_005790101.1 CDS HPPN135_04470 NC_017379.1 904968 906524 R COG0280 Phosphotransacetylase; phosphotransacetylase complement(904968..906524) Helicobacter pylori Puno135 12370442 YP_005790102.1 CDS HPPN135_04475 NC_017379.1 906742 908292 D hypothetical protein 906742..908292 Helicobacter pylori Puno135 12370443 YP_005790103.1 CDS flgD NC_017379.1 908343 909281 D COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 908343..909281 Helicobacter pylori Puno135 12370444 YP_005790104.1 CDS flgE NC_017379.1 909278 911095 D COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 909278..911095 Helicobacter pylori Puno135 12370445 YP_005790105.1 CDS HPPN135_04490 NC_017379.1 911154 911789 D putative restriction endonuclease 911154..911789 Helicobacter pylori Puno135 12370446 YP_005790106.1 CDS HPPN135_04495 NC_017379.1 911758 912918 D COG0827 Adenine-specific DNA methylase; type II DNA modification enzyme (methyltransferase) 911758..912918 Helicobacter pylori Puno135 12370447 YP_005790107.1 CDS HPPN135_04500 NC_017379.1 912912 914942 D COG0210 Superfamily I DNA and RNA helicases; rep helicase, single-stranded DNA-dependent ATPase 912912..914942 Helicobacter pylori Puno135 12370448 YP_005790108.1 CDS HPPN135_04505 NC_017379.1 915196 915291 R hypothetical protein complement(915196..915291) Helicobacter pylori Puno135 12370449 YP_005790109.1 CDS HPPN135_04510 NC_017379.1 915475 917022 D outer membrane protein (omp20) 915475..917022 Helicobacter pylori Puno135 12370450 YP_005790110.1 CDS HPPN135_04515 NC_017379.1 917042 918628 D outer membrane protein HopB 917042..918628 Helicobacter pylori Puno135 12370451 YP_005790111.1 CDS HPPN135_04520 NC_017379.1 918700 918792 R hypothetical protein complement(918700..918792) Helicobacter pylori Puno135 12370452 YP_005790112.1 CDS HPPN135_04525 NC_017379.1 919156 920700 R COG1190 Lysyl-tRNA synthetase (class II); outer membrane protein HopG complement(919156..920700) Helicobacter pylori Puno135 12370453 YP_005790113.1 CDS HPPN135_04530 NC_017379.1 920948 923389 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein complement(920948..923389) Helicobacter pylori Puno135 12370454 YP_005790114.1 CDS HPPN135_04535 NC_017379.1 923563 923994 R COG0009 Putative translation factor (SUA5); hypothetical protein complement(923563..923994) Helicobacter pylori Puno135 12370455 YP_005790115.1 CDS carB NC_017379.1 923999 927256 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(923999..927256) Helicobacter pylori Puno135 12370456 YP_005790116.1 CDS HPPN135_04545 NC_017379.1 927351 928043 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(927351..928043) Helicobacter pylori Puno135 12370457 YP_005790117.1 CDS HPPN135_04550 NC_017379.1 928188 929183 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 928188..929183 Helicobacter pylori Puno135 12370458 YP_005790118.1 CDS HPPN135_04555 NC_017379.1 929263 936552 D COG5651 PPE-repeat proteins; vacuolating cytotoxin VacA-like protein 929263..936552 Helicobacter pylori Puno135 12370459 YP_005790119.1 CDS HPPN135_04560 NC_017379.1 936604 937704 D hypothetical protein 936604..937704 Helicobacter pylori Puno135 12370460 YP_005790120.1 CDS HPPN135_04565 NC_017379.1 937769 937975 R COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase complement(937769..937975) Helicobacter pylori Puno135 12370461 YP_005790121.1 CDS recR NC_017379.1 938138 938719 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 938138..938719 Helicobacter pylori Puno135 12370462 YP_005790122.1 CDS truD NC_017379.1 938716 939861 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 938716..939861 Helicobacter pylori Puno135 12370463 YP_005790123.1 CDS HPPN135_04580 NC_017379.1 939848 940780 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 939848..940780 Helicobacter pylori Puno135 12370464 YP_005790124.1 CDS folE NC_017379.1 940781 941323 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 940781..941323 Helicobacter pylori Puno135 12370465 YP_005790125.1 CDS HPPN135_04590 NC_017379.1 941339 942250 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 941339..942250 Helicobacter pylori Puno135 12370466 YP_005790126.1 CDS surE NC_017379.1 942247 943050 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 942247..943050 Helicobacter pylori Puno135 12370467 YP_005790127.1 CDS HPPN135_04600 NC_017379.1 943047 943706 D hypothetical protein 943047..943706 Helicobacter pylori Puno135 12370468 YP_005790128.1 CDS HPPN135_04605 NC_017379.1 943710 944312 D COG0720 6-pyruvoyl-tetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase 943710..944312 Helicobacter pylori Puno135 12370469 YP_005790129.1 CDS HPPN135_04610 NC_017379.1 944309 945064 D COG0602 Organic radical activating enzymes; hypothetical protein 944309..945064 Helicobacter pylori Puno135 12370470 YP_005790130.1 CDS HPPN135_04615 NC_017379.1 945075 945560 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 945075..945560 Helicobacter pylori Puno135 12370471 YP_005790131.1 CDS HPPN135_04620 NC_017379.1 945786 947771 D putative outer membrane protein HomB 945786..947771 Helicobacter pylori Puno135 12370472 YP_005790132.1 CDS HPPN135_04635 NC_017379.1 949547 949813 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(949547..949813) Helicobacter pylori Puno135 12370473 YP_005790133.1 CDS HPPN135_04640 NC_017379.1 949841 950872 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(949841..950872) Helicobacter pylori Puno135 12370474 YP_005790134.1 CDS HPPN135_04645 NC_017379.1 950850 951239 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(950850..951239) Helicobacter pylori Puno135 12370475 YP_005790135.1 CDS HPPN135_04650 NC_017379.1 951306 952019 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(951306..952019) Helicobacter pylori Puno135 12370476 YP_005790136.1 CDS HPPN135_04655 NC_017379.1 952003 952779 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; ABC-type polar amino acid transport,periplasmic component complement(952003..952779) Helicobacter pylori Puno135 12370477 YP_005790137.1 CDS HPPN135_04660 NC_017379.1 952850 953983 R COG0787 Alanine racemase; alanine racemase complement(952850..953983) Helicobacter pylori Puno135 12370478 YP_005790138.1 CDS HPPN135_04665 NC_017379.1 953990 955342 R COG1115 Na+/alanine symporter; D-alanine glycine permease complement(953990..955342) Helicobacter pylori Puno135 12370479 YP_005790139.1 CDS HPPN135_04670 NC_017379.1 955383 956615 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase complement(955383..956615) Helicobacter pylori Puno135 12370480 YP_005790140.1 CDS HPPN135_04675 NC_017379.1 956638 957015 R COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein complement(956638..957015) Helicobacter pylori Puno135 12370481 YP_005790141.1 CDS HPPN135_04680 NC_017379.1 957431 957730 D protein tRNA-associated locus protein 957431..957730 Helicobacter pylori Puno135 12370483 YP_005790142.1 CDS HPPN135_04685 NC_017379.1 958291 959781 D COG1757 Na+/H+ antiporter; integral membrane protein 958291..959781 Helicobacter pylori Puno135 12370487 YP_005790143.1 CDS HPPN135_04690 NC_017379.1 960198 960296 R hypothetical protein complement(960198..960296) Helicobacter pylori Puno135 12370488 YP_005790144.1 CDS HPPN135_04695 NC_017379.1 960945 961958 R hypothetical protein complement(960945..961958) Helicobacter pylori Puno135 12370489 YP_005790145.1 CDS HPPN135_04700 NC_017379.1 961968 962420 R COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase complement(961968..962420) Helicobacter pylori Puno135 12370490 YP_005790146.1 CDS HPPN135_04705 NC_017379.1 962434 963303 R COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta complement(962434..963303) Helicobacter pylori Puno135 12370491 YP_005790147.1 CDS HPPN135_04710 NC_017379.1 963384 963998 D COG0540 Aspartate carbamoyltransferase, catalytic chain; putative recombination protein RecO 963384..963998 Helicobacter pylori Puno135 12370492 YP_005790148.1 CDS HPPN135_04715 NC_017379.1 964009 964665 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); competence/damage-inducible protein CinA 964009..964665 Helicobacter pylori Puno135 12370493 YP_005790149.1 CDS HPPN135_04720 NC_017379.1 964668 965234 R hypothetical protein complement(964668..965234) Helicobacter pylori Puno135 12370494 YP_005790150.1 CDS HPPN135_04725 NC_017379.1 965299 965931 R COG0778 Nitroreductase; oxygen-insensitive NADPH nitroreductase complement(965299..965931) Helicobacter pylori Puno135 12370495 YP_005790151.1 CDS HPPN135_04730 NC_017379.1 965928 966782 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(965928..966782) Helicobacter pylori Puno135 12370496 YP_005790152.1 CDS HPPN135_04735 NC_017379.1 966791 967519 R RNA-uridine isomerase; RNA pseudouridylate synthase; COG0564 Pseudouridylate synthases, 23S RNA-specific; pseudouridine synthase complement(966791..967519) Helicobacter pylori Puno135 12370497 YP_005790153.1 CDS HPPN135_04740 NC_017379.1 967531 968712 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(967531..968712) Helicobacter pylori Puno135 12370498 YP_005790154.1 CDS HPPN135_04745 NC_017379.1 968713 969477 R COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein complement(968713..969477) Helicobacter pylori Puno135 12370499 YP_005790155.1 CDS HPPN135_04750 NC_017379.1 969487 970218 R COG0327 Uncharacterized conserved protein; hypothetical protein complement(969487..970218) Helicobacter pylori Puno135 12370500 YP_005790156.1 CDS glyQ NC_017379.1 970220 971116 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(970220..971116) Helicobacter pylori Puno135 12370501 YP_005790157.1 CDS gpsA NC_017379.1 971130 972068 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(971130..972068) Helicobacter pylori Puno135 12370502 YP_005790158.1 CDS HPPN135_04765 NC_017379.1 972388 972675 R hypothetical protein complement(972388..972675) Helicobacter pylori Puno135 12370503 YP_005790159.1 CDS HPPN135_04770 NC_017379.1 972699 974600 R COG0699 Predicted GTPases (dynamin-related); ATPase complement(972699..974600) Helicobacter pylori Puno135 12370504 YP_005790160.1 CDS HPPN135_04775 NC_017379.1 974600 976954 R COG0699 Predicted GTPases (dynamin-related); hypothetical protein complement(974600..976954) Helicobacter pylori Puno135 12370505 YP_005790161.1 CDS HPPN135_04790 NC_017379.1 978800 979087 R COG3309 Uncharacterized virulence-associated protein D; virulence associated protein D complement(978800..979087) Helicobacter pylori Puno135 12370506 YP_005790162.1 CDS HPPN135_04795 NC_017379.1 979155 979436 R hypothetical protein complement(979155..979436) Helicobacter pylori Puno135 12370507 YP_005790163.1 CDS HPPN135_04800 NC_017379.1 979447 982506 R COG3696 Putative silver efflux pump; putative cation efflux system protein complement(979447..982506) Helicobacter pylori Puno135 12370508 YP_005790164.1 CDS HPPN135_04805 NC_017379.1 982506 983585 R COG0845 Membrane-fusion protein; putative cation efflux system protein complement(982506..983585) Helicobacter pylori Puno135 12370509 YP_005790165.1 CDS HPPN135_04810 NC_017379.1 983582 984889 R hypothetical protein complement(983582..984889) Helicobacter pylori Puno135 12370510 YP_005790166.1 CDS glyS NC_017379.1 984879 986981 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(984879..986981) Helicobacter pylori Puno135 12370511 YP_005790167.1 CDS HPPN135_04820 NC_017379.1 987116 987259 R hypothetical protein complement(987116..987259) Helicobacter pylori Puno135 12370512 YP_005790168.1 CDS HPPN135_04825 NC_017379.1 988173 989648 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 988173..989648 Helicobacter pylori Puno135 12370513 YP_005790169.1 CDS gatC NC_017379.1 989663 989944 D COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 989663..989944 Helicobacter pylori Puno135 12370514 YP_005790170.1 CDS HPPN135_04835 NC_017379.1 990018 991328 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(990018..991328) Helicobacter pylori Puno135 12370515 YP_005790171.1 CDS HPPN135_04840 NC_017379.1 991458 992921 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 991458..992921 Helicobacter pylori Puno135 12370516 YP_005790172.1 CDS HPPN135_04845 NC_017379.1 992936 994417 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 992936..994417 Helicobacter pylori Puno135 12370517 YP_005790173.1 CDS HPPN135_04850 NC_017379.1 994550 995698 D COG0206 Cell division GTPase; cell division protein FtsZ 994550..995698 Helicobacter pylori Puno135 12370518 YP_005790174.1 CDS HPPN135_04870 NC_017379.1 997419 998243 R COG0668 Small-conductance mechanosensitive channel; small-conductance mechanosensitive channel; membrane protein complement(997419..998243) Helicobacter pylori Puno135 12370519 YP_005790175.1 CDS HPPN135_04875 NC_017379.1 998256 998435 R hypothetical protein complement(998256..998435) Helicobacter pylori Puno135 12370520 YP_005790176.1 CDS HPPN135_04880 NC_017379.1 998601 998702 R COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(998601..998702) Helicobacter pylori Puno135 12370521 YP_005790177.1 CDS HPPN135_04885 NC_017379.1 998725 998817 R exodeoxyribonuclease VII large subunit complement(998725..998817) Helicobacter pylori Puno135 12370522 YP_005790178.1 CDS HPPN135_04890 NC_017379.1 998814 998930 R exodeoxyribonuclease VII large subunit complement(998814..998930) Helicobacter pylori Puno135 12370523 YP_005790179.1 CDS HPPN135_04895 NC_017379.1 998936 999049 R COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein complement(998936..999049) Helicobacter pylori Puno135 12370524 YP_005790180.1 CDS HPPN135_04900 NC_017379.1 999258 1001108 R hypothetical protein complement(999258..1001108) Helicobacter pylori Puno135 12370525 YP_005790181.1 CDS HPPN135_04905 NC_017379.1 1001101 1004172 R hypothetical protein complement(1001101..1004172) Helicobacter pylori Puno135 12370526 YP_005790182.1 CDS HPPN135_04910 NC_017379.1 1004179 1006380 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(1004179..1006380) Helicobacter pylori Puno135 12370527 YP_005790183.1 CDS HPPN135_04915 NC_017379.1 1006377 1008158 R hypothetical protein complement(1006377..1008158) Helicobacter pylori Puno135 12370528 YP_005790184.1 CDS HPPN135_04920 NC_017379.1 1008155 1008685 R COG1112 Superfamily I DNA and RNA helicases and helicase subunits; hypothetical protein complement(1008155..1008685) Helicobacter pylori Puno135 12370529 YP_005790185.1 CDS HPPN135_04925 NC_017379.1 1008689 1011385 R COG1112 Superfamily I DNA and RNA helicases and helicase subunits; hypothetical protein complement(1008689..1011385) Helicobacter pylori Puno135 12370530 YP_005790186.1 CDS HPPN135_04930 NC_017379.1 1011379 1012731 R COG0515 Serine/threonine protein kinase; serine/threonine kinase complement(1011379..1012731) Helicobacter pylori Puno135 12370531 YP_005790187.1 CDS HPPN135_04935 NC_017379.1 1012722 1013408 R COG0631 Serine/threonine protein phosphatase; hypothetical protein complement(1012722..1013408) Helicobacter pylori Puno135 12370532 YP_005790188.1 CDS HPPN135_04940 NC_017379.1 1013405 1013740 R COG3839 ABC-type sugar transport systems, ATPase components; hypothetical protein complement(1013405..1013740) Helicobacter pylori Puno135 12370533 YP_005790189.1 CDS HPPN135_04945 NC_017379.1 1013737 1013835 R hypothetical protein complement(1013737..1013835) Helicobacter pylori Puno135 12370534 YP_005790190.1 CDS HPPN135_04950 NC_017379.1 1013835 1014473 R COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain; phage/colicin/tellurite resistance cluster protein TerY complement(1013835..1014473) Helicobacter pylori Puno135 12370535 YP_005790191.1 CDS HPPN135_04955 NC_017379.1 1015676 1017715 D COG3843 Type IV secretory pathway, VirD2 components (relaxase); hypothetical protein 1015676..1017715 Helicobacter pylori Puno135 12370536 YP_005790192.1 CDS HPPN135_04970 NC_017379.1 1020241 1021110 R COG3177 Uncharacterized conserved protein; cell division protein complement(1020241..1021110) Helicobacter pylori Puno135 12370537 YP_005790193.1 CDS HPPN135_04975 NC_017379.1 1021127 1021378 R hypothetical protein complement(1021127..1021378) Helicobacter pylori Puno135 12370538 YP_005790194.1 CDS HPPN135_04980 NC_017379.1 1021626 1022309 R hypothetical protein complement(1021626..1022309) Helicobacter pylori Puno135 12370539 YP_005790195.1 CDS HPPN135_04985 NC_017379.1 1022478 1023476 R hypothetical protein complement(1022478..1023476) Helicobacter pylori Puno135 12370540 YP_005790196.1 CDS HPPN135_04990 NC_017379.1 1023976 1024626 D hypothetical protein 1023976..1024626 Helicobacter pylori Puno135 12370541 YP_005790197.1 CDS HPPN135_04995 NC_017379.1 1024630 1025883 R hypothetical protein complement(1024630..1025883) Helicobacter pylori Puno135 12370542 YP_005790198.1 CDS HPPN135_05000 NC_017379.1 1025895 1027151 R hypothetical protein complement(1025895..1027151) Helicobacter pylori Puno135 12370543 YP_005790199.1 CDS HPPN135_05005 NC_017379.1 1027151 1028584 R hypothetical protein complement(1027151..1028584) Helicobacter pylori Puno135 12370544 YP_005790200.1 CDS HPPN135_05020 NC_017379.1 1030349 1031392 R hypothetical protein complement(1030349..1031392) Helicobacter pylori Puno135 12370545 YP_005790201.1 CDS HPPN135_05025 NC_017379.1 1031389 1031559 R hypothetical protein complement(1031389..1031559) Helicobacter pylori Puno135 12370546 YP_005790202.1 CDS HPPN135_05030 NC_017379.1 1032307 1032975 D COG1192 ATPases involved in chromosome partitioning; hypothetical protein 1032307..1032975 Helicobacter pylori Puno135 12370547 YP_005790203.1 CDS HPPN135_05035 NC_017379.1 1033016 1033408 D hypothetical protein 1033016..1033408 Helicobacter pylori Puno135 12370548 YP_005790204.1 CDS HPPN135_05040 NC_017379.1 1033386 1034054 D hypothetical protein 1033386..1034054 Helicobacter pylori Puno135 12370549 YP_005790205.1 CDS HPPN135_05055 NC_017379.1 1034942 1035409 R hypothetical protein complement(1034942..1035409) Helicobacter pylori Puno135 12370550 YP_005790206.1 CDS HPPN135_05060 NC_017379.1 1035464 1037524 R COG0550 Topoisomerase IA; topoisomerase I complement(1035464..1037524) Helicobacter pylori Puno135 12370551 YP_005790207.1 CDS HPPN135_05065 NC_017379.1 1037528 1037776 R hypothetical protein complement(1037528..1037776) Helicobacter pylori Puno135 12370552 YP_005790208.1 CDS HPPN135_05070 NC_017379.1 1037776 1037919 R hypothetical protein complement(1037776..1037919) Helicobacter pylori Puno135 12370553 YP_005790209.1 CDS HPPN135_05075 NC_017379.1 1038164 1038820 D COG1192 ATPases involved in chromosome partitioning; PARA protein 1038164..1038820 Helicobacter pylori Puno135 12370554 YP_005790210.1 CDS HPPN135_05080 NC_017379.1 1038903 1039187 D hypothetical protein 1038903..1039187 Helicobacter pylori Puno135 12370555 YP_005790211.1 CDS HPPN135_05105 NC_017379.1 1042610 1042924 D hypothetical protein 1042610..1042924 Helicobacter pylori Puno135 12370556 YP_005790212.1 CDS HPPN135_05110 NC_017379.1 1042917 1043198 D COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 1042917..1043198 Helicobacter pylori Puno135 12370557 YP_005790213.1 CDS HPPN135_05115 NC_017379.1 1043473 1045200 R COG3505 Type IV secretory pathway, VirD4 components; conjugal transfer protein (traG) complement(1043473..1045200) Helicobacter pylori Puno135 12370558 YP_005790214.1 CDS HPPN135_05120 NC_017379.1 1045201 1045758 R hypothetical protein complement(1045201..1045758) Helicobacter pylori Puno135 12370559 YP_005790215.1 CDS HPPN135_05125 NC_017379.1 1045759 1046049 R hypothetical protein complement(1045759..1046049) Helicobacter pylori Puno135 12370560 YP_005790216.1 CDS HPPN135_05130 NC_017379.1 1046046 1046501 R hypothetical protein complement(1046046..1046501) Helicobacter pylori Puno135 12370561 YP_005790217.1 CDS HPPN135_05135 NC_017379.1 1046551 1047438 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; VirB11 complement(1046551..1047438) Helicobacter pylori Puno135 12370562 YP_005790218.1 CDS HPPN135_05140 NC_017379.1 1047438 1047737 R hypothetical protein complement(1047438..1047737) Helicobacter pylori Puno135 12370563 YP_005790219.1 CDS HPPN135_05145 NC_017379.1 1047734 1047997 R hypothetical protein complement(1047734..1047997) Helicobacter pylori Puno135 12370564 YP_005790220.1 CDS HPPN135_05150 NC_017379.1 1047990 1048283 R hypothetical protein complement(1047990..1048283) Helicobacter pylori Puno135 12370565 YP_005790221.1 CDS HPPN135_05155 NC_017379.1 1048353 1049618 R COG2948 Type IV secretory pathway, VirB10 components; VirB10 type IV secretion protein complement(1048353..1049618) Helicobacter pylori Puno135 12370566 YP_005790222.1 CDS HPPN135_05160 NC_017379.1 1049618 1051135 R COG3504 Type IV secretory pathway, VirB9 components; conjugal plasmid transfer system protein complement(1049618..1051135) Helicobacter pylori Puno135 12370567 YP_005790223.1 CDS HPPN135_05165 NC_017379.1 1051135 1052127 R COG3736 Type IV secretory pathway, component VirB8; hypothetical protein complement(1051135..1052127) Helicobacter pylori Puno135 12370568 YP_005790224.1 CDS HPPN135_05170 NC_017379.1 1052129 1052257 R hypothetical protein complement(1052129..1052257) Helicobacter pylori Puno135 12370569 YP_005790225.1 CDS HPPN135_05185 NC_017379.1 1054184 1056682 R COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein complement(1054184..1056682) Helicobacter pylori Puno135 12370570 YP_005790226.1 CDS HPPN135_05190 NC_017379.1 1056695 1056955 R hypothetical protein complement(1056695..1056955) Helicobacter pylori Puno135 12370571 YP_005790227.1 CDS HPPN135_05195 NC_017379.1 1056956 1057258 R hypothetical protein complement(1056956..1057258) Helicobacter pylori Puno135 12370572 YP_005790228.1 CDS HPPN135_05200 NC_017379.1 1057248 1057517 R hypothetical protein complement(1057248..1057517) Helicobacter pylori Puno135 12370573 YP_005790229.1 CDS HPPN135_05205 NC_017379.1 1057495 1059165 R hypothetical protein complement(1057495..1059165) Helicobacter pylori Puno135 12370574 YP_005790230.1 CDS HPPN135_05220 NC_017379.1 1064029 1064124 D hypothetical protein 1064029..1064124 Helicobacter pylori Puno135 12370577 YP_005790231.1 CDS HPPN135_05225 NC_017379.1 1064610 1066352 D COG1479 Uncharacterized conserved protein; hypothetical protein 1064610..1066352 Helicobacter pylori Puno135 12370578 YP_005790232.1 CDS HPPN135_05230 NC_017379.1 1066393 1067646 D COG0608 Single-stranded DNA-specific exonuclease; hypothetical protein 1066393..1067646 Helicobacter pylori Puno135 12370579 YP_005790233.1 CDS HPPN135_05245 NC_017379.1 1069656 1070549 D hypothetical protein 1069656..1070549 Helicobacter pylori Puno135 12370580 YP_005790234.1 CDS HPPN135_05250 NC_017379.1 1070657 1072504 R COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase complement(1070657..1072504) Helicobacter pylori Puno135 12370581 YP_005790235.1 CDS HPPN135_05255 NC_017379.1 1072519 1073688 R COG0438 Glycosyltransferase; type 1 capsular polysaccharide biosynthesis protein J complement(1072519..1073688) Helicobacter pylori Puno135 12370582 YP_005790236.1 CDS HPPN135_05260 NC_017379.1 1073692 1074120 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(1073692..1074120) Helicobacter pylori Puno135 12370583 YP_005790237.1 CDS HPPN135_05265 NC_017379.1 1074136 1074921 R COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase complement(1074136..1074921) Helicobacter pylori Puno135 12370584 YP_005790238.1 CDS HPPN135_05270 NC_017379.1 1074925 1075932 R hypothetical protein complement(1074925..1075932) Helicobacter pylori Puno135 12370585 YP_005790239.1 CDS HPPN135_05275 NC_017379.1 1075933 1077894 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1075933..1077894) Helicobacter pylori Puno135 12370586 YP_005790240.1 CDS HPPN135_05280 NC_017379.1 1078064 1079233 D COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acid synthase 1078064..1079233 Helicobacter pylori Puno135 12370587 YP_005790241.1 CDS HPPN135_05285 NC_017379.1 1079236 1081107 R COG0668 Small-conductance mechanosensitive channel; hypothetical protein complement(1079236..1081107) Helicobacter pylori Puno135 12370588 YP_005790242.1 CDS HPPN135_05295 NC_017379.1 1082219 1083001 R hypothetical protein complement(1082219..1083001) Helicobacter pylori Puno135 12370593 YP_005790243.1 CDS guaA NC_017379.1 1083054 1084580 R COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase complement(1083054..1084580) Helicobacter pylori Puno135 12370594 YP_005790244.1 CDS HPPN135_05305 NC_017379.1 1084591 1085079 R hypothetical protein complement(1084591..1085079) Helicobacter pylori Puno135 12370595 YP_005790245.1 CDS HPPN135_05310 NC_017379.1 1085241 1087631 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; biotin sulfoxide reductase complement(1085241..1087631) Helicobacter pylori Puno135 12370596 YP_005790246.1 CDS HPPN135_05315 NC_017379.1 1087736 1088326 R hypothetical protein complement(1087736..1088326) Helicobacter pylori Puno135 12370597 YP_005790247.1 CDS HPPN135_05320 NC_017379.1 1088352 1089674 R COG0520 Selenocysteine lyase; nifS-like protein complement(1088352..1089674) Helicobacter pylori Puno135 12370598 YP_005790248.1 CDS HPPN135_05325 NC_017379.1 1089693 1090007 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Hit-like protein involved in cell-cycle regulation complement(1089693..1090007) Helicobacter pylori Puno135 12370599 YP_005790249.1 CDS pheS NC_017379.1 1090088 1091074 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1090088..1091074 Helicobacter pylori Puno135 12370600 YP_005790250.1 CDS pheT NC_017379.1 1091074 1093368 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1091074..1093368 Helicobacter pylori Puno135 12370601 YP_005790251.1 CDS HPPN135_05340 NC_017379.1 1093418 1094707 D COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1093418..1094707 Helicobacter pylori Puno135 12370602 YP_005790252.1 CDS ispH NC_017379.1 1094697 1095521 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1094697..1095521 Helicobacter pylori Puno135 12370603 YP_005790253.1 CDS rpsA NC_017379.1 1095642 1097300 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1095642..1097300 Helicobacter pylori Puno135 12370604 YP_005790254.1 CDS HPPN135_05355 NC_017379.1 1097329 1097847 D hypothetical protein 1097329..1097847 Helicobacter pylori Puno135 12370605 YP_005790255.1 CDS HPPN135_05360 NC_017379.1 1097863 1099437 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1097863..1099437 Helicobacter pylori Puno135 12370606 YP_005790256.1 CDS HPPN135_05365 NC_017379.1 1099447 1101297 D COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1099447..1101297 Helicobacter pylori Puno135 12370607 YP_005790257.1 CDS HPPN135_05370 NC_017379.1 1101307 1101975 D COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein 1101307..1101975 Helicobacter pylori Puno135 12370608 YP_005790258.1 CDS HPPN135_05375 NC_017379.1 1101977 1102735 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 1101977..1102735 Helicobacter pylori Puno135 12370609 YP_005790259.1 CDS HPPN135_05380 NC_017379.1 1102739 1103674 D COG0835 Chemotaxis signal transduction protein; CheA-MCP interaction modulator 1102739..1103674 Helicobacter pylori Puno135 12370610 YP_005790260.1 CDS HPPN135_05385 NC_017379.1 1103732 1106164 D COG0643 Chemotaxis protein histidine kinase and related kinases; autophosphorylating histidine kinase 1103732..1106164 Helicobacter pylori Puno135 12370611 YP_005790261.1 CDS HPPN135_05390 NC_017379.1 1106161 1106658 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein (cheW) 1106161..1106658 Helicobacter pylori Puno135 12370612 YP_005790262.1 CDS HPPN135_05395 NC_017379.1 1106909 1107418 R hypothetical protein complement(1106909..1107418) Helicobacter pylori Puno135 12370613 YP_005790263.1 CDS HPPN135_05400 NC_017379.1 1107458 1107760 R hypothetical protein complement(1107458..1107760) Helicobacter pylori Puno135 12370614 YP_005790264.1 CDS HPPN135_05405 NC_017379.1 1108110 1108793 D COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha 1108110..1108793 Helicobacter pylori Puno135 12370615 YP_005790265.1 CDS ureB NC_017379.1 1108810 1110513 D COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta 1108810..1110513 Helicobacter pylori Puno135 12370616 YP_005790266.1 CDS HPPN135_05415 NC_017379.1 1110527 1110856 R hypothetical protein complement(1110527..1110856) Helicobacter pylori Puno135 12370617 YP_005790267.1 CDS HPPN135_05420 NC_017379.1 1110872 1111195 R hypothetical protein complement(1110872..1111195) Helicobacter pylori Puno135 12370618 YP_005790268.1 CDS HPPN135_05425 NC_017379.1 1111196 1112500 R COG1106 Predicted ATPases; RloA protein complement(1111196..1112500) Helicobacter pylori Puno135 12370619 YP_005790269.1 CDS HPPN135_05430 NC_017379.1 1112645 1113151 D putative outer membrane protein 1112645..1113151 Helicobacter pylori Puno135 12370620 YP_005790270.1 CDS HPPN135_05435 NC_017379.1 1113289 1113789 R COG2077 Peroxiredoxin; thiol peroxidase complement(1113289..1113789) Helicobacter pylori Puno135 12370621 YP_005790271.1 CDS HPPN135_05440 NC_017379.1 1114014 1114655 D COG0605 Superoxide dismutase; superoxide dismutase 1114014..1114655 Helicobacter pylori Puno135 12370622 YP_005790272.1 CDS HPPN135_05445 NC_017379.1 1114707 1115426 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1114707..1115426 Helicobacter pylori Puno135 12370623 YP_005790273.1 CDS HPPN135_05450 NC_017379.1 1115455 1117314 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(1115455..1117314) Helicobacter pylori Puno135 12370624 YP_005790274.1 CDS HPPN135_05455 NC_017379.1 1117299 1117535 R hypothetical protein complement(1117299..1117535) Helicobacter pylori Puno135 12370625 YP_005790275.1 CDS HPPN135_05460 NC_017379.1 1117548 1117775 R COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein complement(1117548..1117775) Helicobacter pylori Puno135 12370626 YP_005790276.1 CDS HPPN135_05465 NC_017379.1 1117978 1118724 D hypothetical protein 1117978..1118724 Helicobacter pylori Puno135 12370627 YP_005790277.1 CDS HPPN135_05470 NC_017379.1 1118732 1119259 R hypothetical protein complement(1118732..1119259) Helicobacter pylori Puno135 12370628 YP_005790278.1 CDS HPPN135_05475 NC_017379.1 1119432 1120655 D COG0501 Zn-dependent protease with chaperone function; zinc-metalloprotease 1119432..1120655 Helicobacter pylori Puno135 12370629 YP_005790279.1 CDS HPPN135_05480 NC_017379.1 1120652 1121482 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1120652..1121482 Helicobacter pylori Puno135 12370630 YP_005790280.1 CDS HPPN135_05485 NC_017379.1 1121549 1122895 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 1121549..1122895 Helicobacter pylori Puno135 12370631 YP_005790281.1 CDS HPPN135_05490 NC_017379.1 1122910 1124283 R alpha-(1,3)-fucosyltransferase complement(1122910..1124283) Helicobacter pylori Puno135 12370632 YP_005790282.1 CDS HPPN135_05495 NC_017379.1 1124293 1127103 R COG1333 ResB protein required for cytochrome c biosynthesis; cytochrome c-type biogenesis protein complement(1124293..1127103) Helicobacter pylori Puno135 12370633 YP_005790283.1 CDS HPPN135_05500 NC_017379.1 1127112 1127783 R COG2143 Thioredoxin-related protein; disulfide interchange protein complement(1127112..1127783) Helicobacter pylori Puno135 12370634 YP_005790284.1 CDS hemH NC_017379.1 1127856 1128863 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(1127856..1128863) Helicobacter pylori Puno135 12370635 YP_005790285.1 CDS HPPN135_05510 NC_017379.1 1128919 1129350 D hypothetical protein 1128919..1129350 Helicobacter pylori Puno135 12370636 YP_005790286.1 CDS HPPN135_05515 NC_017379.1 1129351 1130031 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1129351..1130031 Helicobacter pylori Puno135 12370637 YP_005790287.1 CDS HPPN135_05520 NC_017379.1 1130055 1132286 R putative outer membrane protein complement(1130055..1132286) Helicobacter pylori Puno135 12370638 YP_005790288.1 CDS HPPN135_05525 NC_017379.1 1132596 1132709 R hypothetical protein complement(1132596..1132709) Helicobacter pylori Puno135 12370639 YP_005790289.1 CDS dcd NC_017379.1 1132711 1133277 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(1132711..1133277) Helicobacter pylori Puno135 12370640 YP_005790290.1 CDS HPPN135_05535 NC_017379.1 1133408 1133878 D COG0511 Biotin carboxyl carrier protein; biotin carboxyl carrier protein 1133408..1133878 Helicobacter pylori Puno135 12370641 YP_005790291.1 CDS HPPN135_05540 NC_017379.1 1133884 1135254 D COG0439 Biotin carboxylase; biotin carboxylase 1133884..1135254 Helicobacter pylori Puno135 12370642 YP_005790292.1 CDS HPPN135_05545 NC_017379.1 1135347 1136309 D putative type II DNA modification enzyme (methyltransferase) 1135347..1136309 Helicobacter pylori Puno135 12370643 YP_005790293.1 CDS HPPN135_05550 NC_017379.1 1136309 1136857 D hypothetical protein 1136309..1136857 Helicobacter pylori Puno135 12370644 YP_005790294.1 CDS HPPN135_05555 NC_017379.1 1136951 1137550 D hypothetical protein 1136951..1137550 Helicobacter pylori Puno135 12370645 YP_005790295.1 CDS HPPN135_05560 NC_017379.1 1137547 1138674 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; spore coat polysaccharide biosynthesis protein C 1137547..1138674 Helicobacter pylori Puno135 12370646 YP_005790296.1 CDS nrdF NC_017379.1 1138993 1140018 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 1138993..1140018 Helicobacter pylori Puno135 12370648 YP_005790297.1 CDS pcm NC_017379.1 1140028 1140657 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1140028..1140657 Helicobacter pylori Puno135 12370649 YP_005790298.1 CDS HPPN135_05575 NC_017379.1 1140668 1141705 D COG0795 Predicted permeases; hypothetical protein 1140668..1141705 Helicobacter pylori Puno135 12370650 YP_005790299.1 CDS truA NC_017379.1 1141706 1142434 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1141706..1142434 Helicobacter pylori Puno135 12370651 YP_005790300.1 CDS HPPN135_05585 NC_017379.1 1142428 1143462 R COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1142428..1143462) Helicobacter pylori Puno135 12370652 YP_005790301.1 CDS HPPN135_05595 NC_017379.1 1143993 1145528 D putative outer membrane protein 1143993..1145528 Helicobacter pylori Puno135 12370655 YP_005790302.1 CDS HPPN135_05600 NC_017379.1 1145549 1146301 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short chain alcohol dehydrogenase 1145549..1146301 Helicobacter pylori Puno135 12370656 YP_005790303.1 CDS HPPN135_05605 NC_017379.1 1146487 1147359 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1146487..1147359) Helicobacter pylori Puno135 12370657 YP_005790304.1 CDS HPPN135_05610 NC_017379.1 1147429 1148055 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase complement(1147429..1148055) Helicobacter pylori Puno135 12370658 YP_005790305.1 CDS HPPN135_05615 NC_017379.1 1148074 1149900 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase complement(1148074..1149900) Helicobacter pylori Puno135 12370659 YP_005790306.1 CDS HPPN135_05620 NC_017379.1 1149968 1151245 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1149968..1151245 Helicobacter pylori Puno135 12370660 YP_005790307.1 CDS HPPN135_05625 NC_017379.1 1151256 1151939 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1151256..1151939 Helicobacter pylori Puno135 12370661 YP_005790308.1 CDS glk NC_017379.1 1151926 1152936 D COG0837 Glucokinase; glucokinase 1151926..1152936 Helicobacter pylori Puno135 12370662 YP_005790309.1 CDS HPPN135_05635 NC_017379.1 1153099 1154145 D COG1064 Zn-dependent alcohol dehydrogenases; cinnamyl-alcohol dehydrogenase ELI3-2 (cad) 1153099..1154145 Helicobacter pylori Puno135 12370663 YP_005790310.1 CDS HPPN135_05640 NC_017379.1 1154157 1155317 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1154157..1155317) Helicobacter pylori Puno135 12370664 YP_005790311.1 CDS HPPN135_05645 NC_017379.1 1155455 1156645 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1155455..1156645) Helicobacter pylori Puno135 12370665 YP_005790312.1 CDS HPPN135_05650 NC_017379.1 1156715 1156810 D hypothetical protein 1156715..1156810 Helicobacter pylori Puno135 12370666 YP_005790313.1 CDS HPPN135_05655 NC_017379.1 1156807 1158114 D hypothetical protein 1156807..1158114 Helicobacter pylori Puno135 12370667 YP_005790314.1 CDS HPPN135_05660 NC_017379.1 1158121 1158792 R outer membrane protein (omp23) complement(1158121..1158792) Helicobacter pylori Puno135 12370668 YP_005790315.1 CDS HPPN135_05665 NC_017379.1 1159081 1159641 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate flavodoxin oxidoreductase subunit gamma 1159081..1159641 Helicobacter pylori Puno135 12370669 YP_005790316.1 CDS porD NC_017379.1 1159657 1160049 D COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; pyruvate flavodoxin oxidoreductase subunit delta 1159657..1160049 Helicobacter pylori Puno135 12370670 YP_005790317.1 CDS porA NC_017379.1 1160059 1161282 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin oxidoreductase subunit alpha 1160059..1161282 Helicobacter pylori Puno135 12370671 YP_005790318.1 CDS HPPN135_05680 NC_017379.1 1161295 1162239 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; pyruvate ferredoxin oxidoreductase subunit beta 1161295..1162239 Helicobacter pylori Puno135 12370672 YP_005790319.1 CDS HPPN135_05685 NC_017379.1 1162349 1163671 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1162349..1163671 Helicobacter pylori Puno135 12370673 YP_005790320.1 CDS HPPN135_05690 NC_017379.1 1163734 1164567 D outer membrane protein Horl 1163734..1164567 Helicobacter pylori Puno135 12370674 YP_005790321.1 CDS HPPN135_05695 NC_017379.1 1164564 1166540 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(1164564..1166540) Helicobacter pylori Puno135 12370675 YP_005790322.1 CDS HPPN135_05700 NC_017379.1 1166610 1167035 R hypothetical protein complement(1166610..1167035) Helicobacter pylori Puno135 12370676 YP_005790323.1 CDS HPPN135_05705 NC_017379.1 1167643 1167843 D hypothetical protein 1167643..1167843 Helicobacter pylori Puno135 12370677 YP_005790324.1 CDS HPPN135_05710 NC_017379.1 1168082 1168852 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1168082..1168852) Helicobacter pylori Puno135 12370678 YP_005790325.1 CDS HPPN135_05715 NC_017379.1 1169097 1170800 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(1169097..1170800) Helicobacter pylori Puno135 12370679 YP_005790326.1 CDS flgK NC_017379.1 1171003 1172823 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(1171003..1172823) Helicobacter pylori Puno135 12370680 YP_005790327.1 CDS HPPN135_05725 NC_017379.1 1172825 1173259 R hypothetical protein complement(1172825..1173259) Helicobacter pylori Puno135 12370681 YP_005790328.1 CDS HPPN135_05730 NC_017379.1 1173389 1174327 R COG0270 Site-specific DNA methylase; type II DNA modification enzyme (methyltransferase) complement(1173389..1174327) Helicobacter pylori Puno135 12370682 YP_005790329.1 CDS HPPN135_05735 NC_017379.1 1174485 1174688 R flgM protein complement(1174485..1174688) Helicobacter pylori Puno135 12370683 YP_005790330.1 CDS HPPN135_05740 NC_017379.1 1174752 1174958 R hypothetical protein complement(1174752..1174958) Helicobacter pylori Puno135 12370684 YP_005790331.1 CDS HPPN135_05745 NC_017379.1 1174990 1175538 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase slyD complement(1174990..1175538) Helicobacter pylori Puno135 12370685 YP_005790332.1 CDS HPPN135_05750 NC_017379.1 1175525 1176520 R hypothetical protein complement(1175525..1176520) Helicobacter pylori Puno135 12370686 YP_005790333.1 CDS HPPN135_05755 NC_017379.1 1176528 1177067 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(1176528..1177067) Helicobacter pylori Puno135 12370687 YP_005790334.1 CDS tolB NC_017379.1 1177133 1178386 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(1177133..1178386) Helicobacter pylori Puno135 12370688 YP_005790335.1 CDS HPPN135_05765 NC_017379.1 1178383 1179204 R hypothetical protein complement(1178383..1179204) Helicobacter pylori Puno135 12370689 YP_005790336.1 CDS HPPN135_05770 NC_017379.1 1179223 1179624 R COG0848 Biopolymer transport protein; biopolymer transport protein ExbD/TolR complement(1179223..1179624) Helicobacter pylori Puno135 12370690 YP_005790337.1 CDS HPPN135_05775 NC_017379.1 1179677 1180246 R COG0811 Biopolymer transport proteins; biopolymer transport protein complement(1179677..1180246) Helicobacter pylori Puno135 12370691 YP_005790338.1 CDS atpC NC_017379.1 1180257 1180628 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(1180257..1180628) Helicobacter pylori Puno135 12370692 YP_005790339.1 CDS HPPN135_05785 NC_017379.1 1180639 1182039 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(1180639..1182039) Helicobacter pylori Puno135 12370693 YP_005790340.1 CDS HPPN135_05790 NC_017379.1 1182068 1182973 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(1182068..1182973) Helicobacter pylori Puno135 12370694 YP_005790341.1 CDS HPPN135_05795 NC_017379.1 1182988 1184499 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(1182988..1184499) Helicobacter pylori Puno135 12370695 YP_005790342.1 CDS HPPN135_05800 NC_017379.1 1184522 1185064 R F0F1 ATP synthase subunit delta complement(1184522..1185064) Helicobacter pylori Puno135 12370696 YP_005790343.1 CDS HPPN135_05805 NC_017379.1 1185065 1185580 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(1185065..1185580) Helicobacter pylori Puno135 12370697 YP_005790344.1 CDS HPPN135_05810 NC_017379.1 1185584 1186018 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B' complement(1185584..1186018) Helicobacter pylori Puno135 12370698 YP_005790345.1 CDS HPPN135_05815 NC_017379.1 1186129 1187001 R COG1475 Predicted transcriptional regulators; plasmid replication-partition related protein complement(1186129..1187001) Helicobacter pylori Puno135 12370699 YP_005790346.1 CDS HPPN135_05820 NC_017379.1 1187004 1187798 R COG1192 ATPases involved in chromosome partitioning; SpoOJ regulator (soj) complement(1187004..1187798) Helicobacter pylori Puno135 12370700 YP_005790347.1 CDS HPPN135_05825 NC_017379.1 1187804 1188442 R COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase complement(1187804..1188442) Helicobacter pylori Puno135 12370701 YP_005790348.1 CDS fmt NC_017379.1 1188439 1189350 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1188439..1189350) Helicobacter pylori Puno135 12370702 YP_005790349.1 CDS HPPN135_05835 NC_017379.1 1189352 1191811 R COG1196 Chromosome segregation ATPases; hypothetical protein complement(1189352..1191811) Helicobacter pylori Puno135 12370703 YP_005790350.1 CDS HPPN135_05840 NC_017379.1 1191872 1193170 R COG4487 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1191872..1193170) Helicobacter pylori Puno135 12370704 YP_005790351.1 CDS HPPN135_05855 NC_017379.1 1193965 1194120 R hypothetical protein complement(1193965..1194120) Helicobacter pylori Puno135 12370705 YP_005790352.1 CDS HPPN135_05860 NC_017379.1 1196438 1196671 R hypothetical protein complement(1196438..1196671) Helicobacter pylori Puno135 12370707 YP_005790353.1 CDS HPPN135_05865 NC_017379.1 1196640 1197239 R hypothetical protein complement(1196640..1197239) Helicobacter pylori Puno135 12370708 YP_005790354.1 CDS rplS NC_017379.1 1197537 1197893 R COG0335 Ribosomal protein L19; 50S ribosomal protein L19 complement(1197537..1197893) Helicobacter pylori Puno135 12370709 YP_005790355.1 CDS trmD NC_017379.1 1197915 1198604 R COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(1197915..1198604) Helicobacter pylori Puno135 12370710 YP_005790356.1 CDS rimM NC_017379.1 1198605 1199159 R COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM complement(1198605..1199159) Helicobacter pylori Puno135 12370711 YP_005790357.1 CDS HPPN135_05885 NC_017379.1 1199160 1199507 R COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein complement(1199160..1199507) Helicobacter pylori Puno135 12370712 YP_005790358.1 CDS rpsP NC_017379.1 1199524 1199754 R COG0228 Ribosomal protein S16; 30S ribosomal protein S16 complement(1199524..1199754) Helicobacter pylori Puno135 12370713 YP_005790359.1 CDS HPPN135_05895 NC_017379.1 1199828 1201174 R COG0541 Signal recognition particle GTPase; signal recognition particle protein complement(1199828..1201174) Helicobacter pylori Puno135 12370714 YP_005790360.1 CDS valS NC_017379.1 1201189 1203807 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(1201189..1203807) Helicobacter pylori Puno135 12370715 YP_005790361.1 CDS HPPN135_05905 NC_017379.1 1203944 1204351 D COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1203944..1204351 Helicobacter pylori Puno135 12370716 YP_005790362.1 CDS murG NC_017379.1 1204363 1205424 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1204363..1205424 Helicobacter pylori Puno135 12370717 YP_005790363.1 CDS HPPN135_05915 NC_017379.1 1205529 1207622 D outer membrane protein HopI 1205529..1207622 Helicobacter pylori Puno135 12370718 YP_005790364.1 CDS HPPN135_05920 NC_017379.1 1207645 1211328 D outer membrane protein HopL 1207645..1211328 Helicobacter pylori Puno135 12370719 YP_005790365.1 CDS HPPN135_05925 NC_017379.1 1211341 1212135 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1211341..1212135 Helicobacter pylori Puno135 12370720 YP_005790366.1 CDS HPPN135_05930 NC_017379.1 1212141 1212674 D COG2184 Protein involved in cell division; cell filamentation protein 1212141..1212674 Helicobacter pylori Puno135 12370721 YP_005790367.1 CDS HPPN135_05935 NC_017379.1 1212689 1213453 R hypothetical protein complement(1212689..1213453) Helicobacter pylori Puno135 12370722 YP_005790368.1 CDS HPPN135_05940 NC_017379.1 1213465 1213926 R COG4278 Uncharacterized conserved protein; hypothetical protein complement(1213465..1213926) Helicobacter pylori Puno135 12370723 YP_005790369.1 CDS HPPN135_05945 NC_017379.1 1214029 1214457 R COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein complement(1214029..1214457) Helicobacter pylori Puno135 12370724 YP_005790370.1 CDS HPPN135_05950 NC_017379.1 1214511 1215005 R COG0716 Flavodoxins; flavodoxin FldA complement(1214511..1215005) Helicobacter pylori Puno135 12370725 YP_005790371.1 CDS HPPN135_05955 NC_017379.1 1215095 1215676 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(1215095..1215676) Helicobacter pylori Puno135 12370726 YP_005790372.1 CDS HPPN135_05960 NC_017379.1 1215799 1215996 D COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cation transport subunit forcbb3-type oxidase 1215799..1215996 Helicobacter pylori Puno135 12370727 YP_005790373.1 CDS HPPN135_05965 NC_017379.1 1216023 1216988 D COG0492 Thioredoxin reductase; thioredoxin reductase 1216023..1216988 Helicobacter pylori Puno135 12370728 YP_005790374.1 CDS HPPN135_05970 NC_017379.1 1217188 1218348 R COG0477 Permeases of the major facilitator superfamily; tetracycline resistance proteintet A (P) complement(1217188..1218348) Helicobacter pylori Puno135 12370729 YP_005790375.1 CDS pgi NC_017379.1 1218412 1220049 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1218412..1220049 Helicobacter pylori Puno135 12370730 YP_005790376.1 CDS HPPN135_05980 NC_017379.1 1220037 1220123 R hypothetical protein complement(1220037..1220123) Helicobacter pylori Puno135 12370731 YP_005790377.1 CDS HPPN135_05985 NC_017379.1 1220358 1221773 D outer membrane protein HofH 1220358..1221773 Helicobacter pylori Puno135 12370732 YP_005790378.1 CDS HPPN135_05990 NC_017379.1 1221934 1222083 R hypothetical protein complement(1221934..1222083) Helicobacter pylori Puno135 12370733 YP_005790379.1 CDS HPPN135_05995 NC_017379.1 1222080 1224143 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein complement(1222080..1224143) Helicobacter pylori Puno135 12370734 YP_005790380.1 CDS HPPN135_06000 NC_017379.1 1224353 1225006 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1224353..1225006 Helicobacter pylori Puno135 12370735 YP_005790381.1 CDS HPPN135_06005 NC_017379.1 1225009 1225680 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1225009..1225680 Helicobacter pylori Puno135 12370736 YP_005790382.1 CDS HPPN135_06010 NC_017379.1 1225682 1226428 D COG1126 ABC-type polar amino acid transport system, ATPase component; phosphate ABC transporter ATP-binding protein 1225682..1226428 Helicobacter pylori Puno135 12370737 YP_005790383.1 CDS HPPN135_06015 NC_017379.1 1226477 1227310 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter, periplasmic glutamine-binding protein 1226477..1227310 Helicobacter pylori Puno135 12370738 YP_005790384.1 CDS HPPN135_06020 NC_017379.1 1227431 1227982 D hypothetical protein 1227431..1227982 Helicobacter pylori Puno135 12370739 YP_005790385.1 CDS HPPN135_06025 NC_017379.1 1228199 1229422 R COG0738 Fucose permease; glucose/galactose transporter complement(1228199..1229422) Helicobacter pylori Puno135 12370740 YP_005790386.1 CDS HPPN135_06030 NC_017379.1 1229552 1230859 R COG2252 Permeases; hypothetical protein complement(1229552..1230859) Helicobacter pylori Puno135 12370741 YP_005790387.1 CDS HPPN135_06035 NC_017379.1 1231166 1231303 D hypothetical protein 1231166..1231303 Helicobacter pylori Puno135 12370742 YP_005790388.1 CDS HPPN135_06040 NC_017379.1 1231281 1233206 R outer membrane protein (omp27) complement(1231281..1233206) Helicobacter pylori Puno135 12370743 YP_005790389.1 CDS HPPN135_06045 NC_017379.1 1233482 1234186 R COG0813 Purine-nucleoside phosphorylase; purine-nucleoside phosphorylase complement(1233482..1234186) Helicobacter pylori Puno135 12370744 YP_005790390.1 CDS HPPN135_06050 NC_017379.1 1234183 1235424 R COG1015 Phosphopentomutase; phosphopentomutase complement(1234183..1235424) Helicobacter pylori Puno135 12370745 YP_005790391.1 CDS HPPN135_06055 NC_017379.1 1235436 1236692 R COG1972 Nucleoside permease; pyrimidine nucleoside transport protein (nupC) complement(1235436..1236692) Helicobacter pylori Puno135 12370746 YP_005790392.1 CDS HPPN135_06060 NC_017379.1 1237018 1238349 D COG0477 Permeases of the major facilitator superfamily; multidrug-efflux transporter 1237018..1238349 Helicobacter pylori Puno135 12370748 YP_005790393.1 CDS HPPN135_06065 NC_017379.1 1238367 1239128 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 1238367..1239128 Helicobacter pylori Puno135 12370749 YP_005790394.1 CDS HPPN135_06070 NC_017379.1 1239138 1240289 R COG0475 Kef-type K+ transport systems, membrane components; Na+/H+ antiporter complement(1239138..1240289) Helicobacter pylori Puno135 12370750 YP_005790395.1 CDS HPPN135_06075 NC_017379.1 1240315 1241694 R COG0534 Na+-driven multidrug efflux pump; hypothetical protein complement(1240315..1241694) Helicobacter pylori Puno135 12370751 YP_005790396.1 CDS HPPN135_06080 NC_017379.1 1241854 1243029 R COG2814 Arabinose efflux permease; putative arabinose transporter complement(1241854..1243029) Helicobacter pylori Puno135 12370752 YP_005790397.1 CDS HPPN135_06085 NC_017379.1 1243306 1244049 D COG3338 Carbonic anhydrase; alpha-carbonic anhydrase 1243306..1244049 Helicobacter pylori Puno135 12370753 YP_005790398.1 CDS HPPN135_06090 NC_017379.1 1244339 1246144 D COG1757 Na+/H+ antiporter; hypothetical protein 1244339..1246144 Helicobacter pylori Puno135 12370754 YP_005790399.1 CDS HPPN135_06095 NC_017379.1 1246212 1247972 D hypothetical protein 1246212..1247972 Helicobacter pylori Puno135 12370755 YP_005790400.1 CDS HPPN135_06100 NC_017379.1 1248156 1249196 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(1248156..1249196) Helicobacter pylori Puno135 12370756 YP_005790401.1 CDS hisS NC_017379.1 1249183 1250511 R COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(1249183..1250511) Helicobacter pylori Puno135 12370757 YP_005790402.1 CDS HPPN135_06110 NC_017379.1 1250573 1251622 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase II 1250573..1251622 Helicobacter pylori Puno135 12370758 YP_005790403.1 CDS HPPN135_06115 NC_017379.1 1251756 1251974 R hypothetical protein complement(1251756..1251974) Helicobacter pylori Puno135 12370759 YP_005790404.1 CDS HPPN135_06120 NC_017379.1 1252192 1253181 D COG0667 Predicted oxidoreductases (related to aryl-alcohol dehydrogenases); aldo-ketoreductase, putative 1252192..1253181 Helicobacter pylori Puno135 12370760 YP_005790405.1 CDS HPPN135_06125 NC_017379.1 1253703 1255781 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(1253703..1255781) Helicobacter pylori Puno135 12370761 YP_005790406.1 CDS HPPN135_06130 NC_017379.1 1255793 1256260 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(1255793..1256260) Helicobacter pylori Puno135 12370762 YP_005790407.1 CDS rpsL NC_017379.1 1256276 1256683 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(1256276..1256683) Helicobacter pylori Puno135 12370763 YP_005790408.1 CDS HPPN135_06140 NC_017379.1 1256771 1265443 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; bifunctional DNA-directed RNA polymerase subunit beta/beta' complement(1256771..1265443) Helicobacter pylori Puno135 12370764 YP_005790409.1 CDS HPPN135_06145 NC_017379.1 1265437 1265628 D hypothetical protein 1265437..1265628 Helicobacter pylori Puno135 12370765 YP_005790410.1 CDS rplL NC_017379.1 1265667 1266044 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(1265667..1266044) Helicobacter pylori Puno135 12370766 YP_005790411.1 CDS rplJ NC_017379.1 1266089 1266583 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(1266089..1266583) Helicobacter pylori Puno135 12370767 YP_005790412.1 CDS rplA NC_017379.1 1266692 1267396 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(1266692..1267396) Helicobacter pylori Puno135 12370768 YP_005790413.1 CDS rplK NC_017379.1 1267441 1267866 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(1267441..1267866) Helicobacter pylori Puno135 12370769 YP_005790414.1 CDS nusG NC_017379.1 1267884 1268411 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(1267884..1268411) Helicobacter pylori Puno135 12370770 YP_005790415.1 CDS secE NC_017379.1 1268441 1268620 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(1268441..1268620) Helicobacter pylori Puno135 12370771 YP_005790416.1 CDS rpmG NC_017379.1 1268878 1269036 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(1268878..1269036) Helicobacter pylori Puno135 12370773 YP_005790417.1 CDS HPPN135_06185 NC_017379.1 1269070 1270269 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(1269070..1270269) Helicobacter pylori Puno135 12370774 YP_005790418.1 CDS HPPN135_06190 NC_017379.1 1270974 1272710 D COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC-transporter, ATP-binding domain 1270974..1272710 Helicobacter pylori Puno135 12370779 YP_005790419.1 CDS HPPN135_06195 NC_017379.1 1272719 1273387 R COG0546 Predicted phosphatases; hypothetical protein complement(1272719..1273387) Helicobacter pylori Puno135 12370780 YP_005790420.1 CDS HPPN135_06200 NC_017379.1 1273490 1274479 R COG3392 Adenine-specific DNA methylase; Site-specific DNA-methyltransferase complement(1273490..1274479) Helicobacter pylori Puno135 12370781 YP_005790421.1 CDS HPPN135_06205 NC_017379.1 1274488 1275174 R IceA; ulcer-associated gene restriction endonuclease complement(1274488..1275174) Helicobacter pylori Puno135 12370782 YP_005790422.1 CDS HPPN135_06210 NC_017379.1 1275227 1275742 R COG1045 Serine acetyltransferase; serine acetyltransferase complement(1275227..1275742) Helicobacter pylori Puno135 12370783 YP_005790423.1 CDS HPPN135_06215 NC_017379.1 1275783 1275902 R hypothetical protein complement(1275783..1275902) Helicobacter pylori Puno135 12370785 YP_005790424.1 CDS HPPN135_06220 NC_017379.1 1276407 1276724 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(1276407..1276724) Helicobacter pylori Puno135 12370791 YP_005790425.1 CDS HPPN135_06225 NC_017379.1 1276861 1278927 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(1276861..1278927) Helicobacter pylori Puno135 12370792 YP_005790426.1 CDS HPPN135_06230 NC_017379.1 1278930 1279634 R COG1926 Predicted phosphoribosyltransferases; hypothetical protein complement(1278930..1279634) Helicobacter pylori Puno135 12370793 YP_005790427.1 CDS HPPN135_06235 NC_017379.1 1279649 1281910 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(1279649..1281910) Helicobacter pylori Puno135 12370794 YP_005790428.1 CDS HPPN135_06240 NC_017379.1 1281913 1282392 R hypothetical protein complement(1281913..1282392) Helicobacter pylori Puno135 12370795 YP_005790429.1 CDS HPPN135_06245 NC_017379.1 1282434 1283708 R COG0151 Phosphoribosylamine-glycine ligase; glycinamide ribonucleotide synthetase complement(1282434..1283708) Helicobacter pylori Puno135 12370796 YP_005790430.1 CDS HPPN135_06250 NC_017379.1 1284020 1284706 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1284020..1284706) Helicobacter pylori Puno135 12370797 YP_005790431.1 CDS HPPN135_06255 NC_017379.1 1284700 1285404 R COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase complement(1284700..1285404) Helicobacter pylori Puno135 12370799 YP_005790432.1 CDS HPPN135_06260 NC_017379.1 1285444 1288284 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(1285444..1288284) Helicobacter pylori Puno135 12370801 YP_005790433.1 CDS HPPN135_06265 NC_017379.1 1288356 1288688 D COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 1288356..1288688 Helicobacter pylori Puno135 12370802 YP_005790434.1 CDS hemD NC_017379.1 1288709 1289362 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 1288709..1289362 Helicobacter pylori Puno135 12370803 YP_005790435.1 CDS HPPN135_06275 NC_017379.1 1289419 1289811 D COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 1289419..1289811 Helicobacter pylori Puno135 12370804 YP_005790436.1 CDS HPPN135_06280 NC_017379.1 1289857 1290894 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(1289857..1290894) Helicobacter pylori Puno135 12370805 YP_005790437.1 CDS HPPN135_06285 NC_017379.1 1290990 1291280 D COG2863 Cytochrome c553; cytochrome c-553 1290990..1291280 Helicobacter pylori Puno135 12370806 YP_005790438.1 CDS HPPN135_06290 NC_017379.1 1291321 1291464 D hypothetical protein 1291321..1291464 Helicobacter pylori Puno135 12370807 YP_005790439.1 CDS HPPN135_06295 NC_017379.1 1291454 1291927 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 1291454..1291927 Helicobacter pylori Puno135 12370808 YP_005790440.1 CDS HPPN135_06300 NC_017379.1 1291921 1293138 D COG0527 Aspartokinases; aspartate kinase 1291921..1293138 Helicobacter pylori Puno135 12370809 YP_005790441.1 CDS HPPN135_06305 NC_017379.1 1293135 1293677 D hypothetical protein 1293135..1293677 Helicobacter pylori Puno135 12370810 YP_005790442.1 CDS HPPN135_06310 NC_017379.1 1293674 1294330 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1293674..1294330 Helicobacter pylori Puno135 12370811 YP_005790443.1 CDS HPPN135_06315 NC_017379.1 1294327 1295469 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1294327..1295469 Helicobacter pylori Puno135 12370812 YP_005790444.1 CDS HPPN135_06320 NC_017379.1 1295494 1295955 R hypothetical protein complement(1295494..1295955) Helicobacter pylori Puno135 12370813 YP_005790445.1 CDS HPPN135_06325 NC_017379.1 1296148 1296303 D hypothetical protein 1296148..1296303 Helicobacter pylori Puno135 12370814 YP_005790446.1 CDS HPPN135_06330 NC_017379.1 1296353 1297249 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; membrane transport protein 1296353..1297249 Helicobacter pylori Puno135 12370815 YP_005790447.1 CDS HPPN135_06335 NC_017379.1 1297253 1298500 D hypothetical protein 1297253..1298500 Helicobacter pylori Puno135 12370816 YP_005790448.1 CDS HPPN135_06340 NC_017379.1 1298579 1299130 D COG2952 Uncharacterized protein conserved in bacteria; hypothetical protein 1298579..1299130 Helicobacter pylori Puno135 12370817 YP_005790449.1 CDS HPPN135_06345 NC_017379.1 1299130 1300257 D COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 1299130..1300257 Helicobacter pylori Puno135 12370818 YP_005790450.1 CDS amiF NC_017379.1 1300424 1301428 D COG0388 Predicted amidohydrolase; formamidase 1300424..1301428 Helicobacter pylori Puno135 12370819 YP_005790451.1 CDS HPPN135_06355 NC_017379.1 1301507 1302031 R hypothetical protein complement(1301507..1302031) Helicobacter pylori Puno135 12370820 YP_005790452.1 CDS HPPN135_06360 NC_017379.1 1302174 1302650 R hypothetical protein complement(1302174..1302650) Helicobacter pylori Puno135 12370821 YP_005790453.1 CDS HPPN135_06365 NC_017379.1 1302764 1303336 R COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein complement(1302764..1303336) Helicobacter pylori Puno135 12370822 YP_005790454.1 CDS alaS NC_017379.1 1303338 1305881 R COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase complement(1303338..1305881) Helicobacter pylori Puno135 12370823 YP_005790455.1 CDS HPPN135_06375 NC_017379.1 1306001 1306231 D COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein 1306001..1306231 Helicobacter pylori Puno135 12370824 YP_005790456.1 CDS HPPN135_06380 NC_017379.1 1306470 1306565 R hypothetical protein complement(1306470..1306565) Helicobacter pylori Puno135 12370825 YP_005790457.1 CDS HPPN135_06385 NC_017379.1 1306703 1308754 R outer membrane protein (omp19) complement(1306703..1308754) Helicobacter pylori Puno135 12370826 YP_005790458.1 CDS HPPN135_06390 NC_017379.1 1308897 1309049 R hypothetical protein complement(1308897..1309049) Helicobacter pylori Puno135 12370827 YP_005790459.1 CDS rpsR NC_017379.1 1309271 1309528 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(1309271..1309528) Helicobacter pylori Puno135 12370828 YP_005790460.1 CDS HPPN135_06400 NC_017379.1 1309551 1310096 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(1309551..1310096) Helicobacter pylori Puno135 12370829 YP_005790461.1 CDS rpsF NC_017379.1 1310106 1310534 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(1310106..1310534) Helicobacter pylori Puno135 12370830 YP_005790462.1 CDS HPPN135_06410 NC_017379.1 1310677 1311699 R DNA polymerase III subunit delta complement(1310677..1311699) Helicobacter pylori Puno135 12370831 YP_005790463.1 CDS HPPN135_06415 NC_017379.1 1311689 1313623 R COG0557 Exoribonuclease R; ribonuclease R complement(1311689..1313623) Helicobacter pylori Puno135 12370832 YP_005790464.1 CDS aroE NC_017379.1 1313623 1314414 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1313623..1314414) Helicobacter pylori Puno135 12370833 YP_005790465.1 CDS HPPN135_06425 NC_017379.1 1314422 1315000 R hypothetical protein complement(1314422..1315000) Helicobacter pylori Puno135 12370834 YP_005790466.1 CDS HPPN135_06430 NC_017379.1 1315021 1316067 R COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide ABC transporter permease complement(1315021..1316067) Helicobacter pylori Puno135 12370835 YP_005790467.1 CDS HPPN135_06435 NC_017379.1 1316064 1317845 R COG4166 ABC-type oligopeptide transport system, periplasmic component; hypothetical protein complement(1316064..1317845) Helicobacter pylori Puno135 12370836 YP_005790468.1 CDS HPPN135_06440 NC_017379.1 1317846 1318826 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1317846..1318826) Helicobacter pylori Puno135 12370837 YP_005790469.1 CDS HPPN135_06445 NC_017379.1 1318897 1319619 R COG0500 SAM-dependent methyltransferases; biotin synthase complement(1318897..1319619) Helicobacter pylori Puno135 12370838 YP_005790470.1 CDS secG NC_017379.1 1319739 1320338 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1319739..1320338 Helicobacter pylori Puno135 12370839 YP_005790471.1 CDS frr NC_017379.1 1320338 1320895 D COG0233 Ribosome recycling factor; ribosome recycling factor 1320338..1320895 Helicobacter pylori Puno135 12370840 YP_005790472.1 CDS pyrE NC_017379.1 1320899 1321504 D COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1320899..1321504 Helicobacter pylori Puno135 12370841 YP_005790473.1 CDS HPPN135_06465 NC_017379.1 1321494 1321958 D COG1714 Predicted membrane protein/domain; hypothetical protein 1321494..1321958 Helicobacter pylori Puno135 12370842 YP_005790474.1 CDS HPPN135_06470 NC_017379.1 1321955 1322644 D COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 1321955..1322644 Helicobacter pylori Puno135 12370843 YP_005790475.1 CDS HPPN135_06475 NC_017379.1 1322746 1323147 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1322746..1323147 Helicobacter pylori Puno135 12370844 YP_005790476.1 CDS HPPN135_06480 NC_017379.1 1323147 1323626 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1323147..1323626 Helicobacter pylori Puno135 12370845 YP_005790477.1 CDS HPPN135_06485 NC_017379.1 1323626 1324423 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C 1323626..1324423 Helicobacter pylori Puno135 12370846 YP_005790478.1 CDS HPPN135_06490 NC_017379.1 1324425 1325654 D COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D 1324425..1325654 Helicobacter pylori Puno135 12370847 YP_005790479.1 CDS HPPN135_06495 NC_017379.1 1325651 1325881 D NADH dehydrogenase I subunit E 1325651..1325881 Helicobacter pylori Puno135 12370848 YP_005790480.1 CDS HPPN135_06500 NC_017379.1 1325884 1326870 D NADH-ubiquinone oxidoreductase subunit F 1325884..1326870 Helicobacter pylori Puno135 12370849 YP_005790481.1 CDS HPPN135_06505 NC_017379.1 1326867 1329401 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1326867..1329401 Helicobacter pylori Puno135 12370850 YP_005790482.1 CDS HPPN135_06510 NC_017379.1 1329398 1330387 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 1329398..1330387 Helicobacter pylori Puno135 12370851 YP_005790483.1 CDS HPPN135_06515 NC_017379.1 1330398 1331060 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1330398..1331060 Helicobacter pylori Puno135 12370852 YP_005790484.1 CDS HPPN135_06520 NC_017379.1 1331053 1331601 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 1331053..1331601 Helicobacter pylori Puno135 12370853 YP_005790485.1 CDS HPPN135_06525 NC_017379.1 1331598 1331900 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 1331598..1331900 Helicobacter pylori Puno135 12370854 YP_005790486.1 CDS HPPN135_06530 NC_017379.1 1331903 1333741 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 1331903..1333741 Helicobacter pylori Puno135 12370855 YP_005790487.1 CDS HPPN135_06535 NC_017379.1 1333745 1335283 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 1333745..1335283 Helicobacter pylori Puno135 12370856 YP_005790488.1 CDS HPPN135_06540 NC_017379.1 1335270 1336748 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 1335270..1336748 Helicobacter pylori Puno135 12370857 YP_005790489.1 CDS HPPN135_06545 NC_017379.1 1336738 1339149 D COG1729 Uncharacterized protein conserved in bacteria; paralysed flagella protein 1336738..1339149 Helicobacter pylori Puno135 12370858 YP_005790490.1 CDS HPPN135_06550 NC_017379.1 1339151 1340527 D COG1109 Phosphomannomutase; phosphomannomutase 1339151..1340527 Helicobacter pylori Puno135 12370859 YP_005790491.1 CDS HPPN135_06555 NC_017379.1 1340714 1340914 D hypothetical protein 1340714..1340914 Helicobacter pylori Puno135 12370860 YP_005790492.1 CDS trpA NC_017379.1 1341153 1341941 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1341153..1341941) Helicobacter pylori Puno135 12370861 YP_005790493.1 CDS HPPN135_06565 NC_017379.1 1341931 1343118 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(1341931..1343118) Helicobacter pylori Puno135 12370862 YP_005790494.1 CDS HPPN135_06570 NC_017379.1 1343120 1344478 R COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1343120..1344478) Helicobacter pylori Puno135 12370863 YP_005790495.1 CDS trpD NC_017379.1 1344471 1345478 R COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(1344471..1345478) Helicobacter pylori Puno135 12370864 YP_005790496.1 CDS HPPN135_06580 NC_017379.1 1345475 1346059 R COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II complement(1345475..1346059) Helicobacter pylori Puno135 12370865 YP_005790497.1 CDS HPPN135_06585 NC_017379.1 1346056 1347558 R COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(1346056..1347558) Helicobacter pylori Puno135 12370866 YP_005790498.1 CDS HPPN135_06590 NC_017379.1 1347789 1348847 R COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein complement(1347789..1348847) Helicobacter pylori Puno135 12370867 YP_005790499.1 CDS HPPN135_06595 NC_017379.1 1348915 1349652 R COG2503 Predicted secreted acid phosphatase; acid phosphatase lipoprotein complement(1348915..1349652) Helicobacter pylori Puno135 12370868 YP_005790500.1 CDS HPPN135_06600 NC_017379.1 1349777 1350325 D COG2353 Uncharacterized conserved protein; hypothetical protein 1349777..1350325 Helicobacter pylori Puno135 12370869 YP_005790501.1 CDS HPPN135_06605 NC_017379.1 1350935 1351591 D COG0819 Putative transcription activator; putative transcriptional regulator 1350935..1351591 Helicobacter pylori Puno135 12370870 YP_005790502.1 CDS HPPN135_06610 NC_017379.1 1351713 1352375 D COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter 1351713..1352375 Helicobacter pylori Puno135 12370871 YP_005790503.1 CDS HPPN135_06615 NC_017379.1 1352363 1352977 D COG1564 Thiamine pyrophosphokinase; thiamine pyrophosphokinase 1352363..1352977 Helicobacter pylori Puno135 12370872 YP_005790504.1 CDS HPPN135_06620 NC_017379.1 1353107 1353259 D hypothetical protein 1353107..1353259 Helicobacter pylori Puno135 12370873 YP_005790505.1 CDS HPPN135_06625 NC_017379.1 1353327 1353485 R hypothetical protein complement(1353327..1353485) Helicobacter pylori Puno135 12370874 YP_005790506.1 CDS rplQ NC_017379.1 1353482 1353832 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(1353482..1353832) Helicobacter pylori Puno135 12370875 YP_005790507.1 CDS HPPN135_06635 NC_017379.1 1353832 1354866 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(1353832..1354866) Helicobacter pylori Puno135 12370876 YP_005790508.1 CDS rpsD NC_017379.1 1354878 1355504 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(1354878..1355504) Helicobacter pylori Puno135 12370877 YP_005790509.1 CDS HPPN135_06645 NC_017379.1 1355514 1355909 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(1355514..1355909) Helicobacter pylori Puno135 12370878 YP_005790510.1 CDS rpsM NC_017379.1 1355932 1356294 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(1355932..1356294) Helicobacter pylori Puno135 12370879 YP_005790511.1 CDS HPPN135_06655 NC_017379.1 1356298 1356411 R COG0257 Ribosomal protein L36; hypothetical protein complement(1356298..1356411) Helicobacter pylori Puno135 12370880 YP_005790512.1 CDS infA NC_017379.1 1356490 1356708 R COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(1356490..1356708) Helicobacter pylori Puno135 12370881 YP_005790513.1 CDS HPPN135_06665 NC_017379.1 1356708 1357469 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1356708..1357469) Helicobacter pylori Puno135 12370882 YP_005790514.1 CDS secY NC_017379.1 1357469 1358731 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(1357469..1358731) Helicobacter pylori Puno135 12370883 YP_005790515.1 CDS rplO NC_017379.1 1358769 1359170 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(1358769..1359170) Helicobacter pylori Puno135 12370884 YP_005790516.1 CDS rpsE NC_017379.1 1359197 1359640 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(1359197..1359640) Helicobacter pylori Puno135 12370885 YP_005790517.1 CDS rplR NC_017379.1 1359655 1360011 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(1359655..1360011) Helicobacter pylori Puno135 12370886 YP_005790518.1 CDS rplF NC_017379.1 1360025 1360561 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(1360025..1360561) Helicobacter pylori Puno135 12370887 YP_005790519.1 CDS rpsH NC_017379.1 1360572 1360967 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(1360572..1360967) Helicobacter pylori Puno135 12370888 YP_005790520.1 CDS rpsN NC_017379.1 1360977 1361162 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(1360977..1361162) Helicobacter pylori Puno135 12370889 YP_005790521.1 CDS rplE NC_017379.1 1361172 1361717 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(1361172..1361717) Helicobacter pylori Puno135 12370890 YP_005790522.1 CDS rplX NC_017379.1 1361730 1361951 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(1361730..1361951) Helicobacter pylori Puno135 12370891 YP_005790523.1 CDS rplN NC_017379.1 1361951 1362319 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(1361951..1362319) Helicobacter pylori Puno135 12370892 YP_005790524.1 CDS rpsQ NC_017379.1 1362322 1362582 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(1362322..1362582) Helicobacter pylori Puno135 12370893 YP_005790525.1 CDS HPPN135_06725 NC_017379.1 1362596 1362796 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(1362596..1362796) Helicobacter pylori Puno135 12370894 YP_005790526.1 CDS rplP NC_017379.1 1362783 1363208 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(1362783..1363208) Helicobacter pylori Puno135 12370895 YP_005790527.1 CDS rpsC NC_017379.1 1363211 1363915 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(1363211..1363915) Helicobacter pylori Puno135 12370896 YP_005790528.1 CDS rplV NC_017379.1 1363919 1364287 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(1363919..1364287) Helicobacter pylori Puno135 12370897 YP_005790529.1 CDS rpsS NC_017379.1 1364297 1364578 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(1364297..1364578) Helicobacter pylori Puno135 12370898 YP_005790530.1 CDS rplB NC_017379.1 1364590 1365420 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(1364590..1365420) Helicobacter pylori Puno135 12370899 YP_005790531.1 CDS rplW NC_017379.1 1365436 1365717 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(1365436..1365717) Helicobacter pylori Puno135 12370900 YP_005790532.1 CDS rplD NC_017379.1 1365721 1366368 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(1365721..1366368) Helicobacter pylori Puno135 12370901 YP_005790533.1 CDS rplC NC_017379.1 1366403 1366978 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(1366403..1366978) Helicobacter pylori Puno135 12370902 YP_005790534.1 CDS rpsJ NC_017379.1 1367015 1367329 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(1367015..1367329) Helicobacter pylori Puno135 12370903 YP_005790535.1 CDS HPPN135_06775 NC_017379.1 1367539 1368624 D COG3842 ABC-type spermidine/putrescine transport systems, ATPase components; hypothetical protein 1367539..1368624 Helicobacter pylori Puno135 12370904 YP_005790536.1 CDS HPPN135_06780 NC_017379.1 1368905 1369483 D hypothetical protein 1368905..1369483 Helicobacter pylori Puno135 12370905 YP_005790537.1 CDS rnhB NC_017379.1 1369457 1370071 R COG0164 Ribonuclease HII; ribonuclease HII complement(1369457..1370071) Helicobacter pylori Puno135 12370906 YP_005790538.1 CDS HPPN135_06790 NC_017379.1 1370117 1370353 R hypothetical protein complement(1370117..1370353) Helicobacter pylori Puno135 12370907 YP_005790539.1 CDS fumC NC_017379.1 1370376 1371767 R COG0114 Fumarase; fumarate hydratase complement(1370376..1371767) Helicobacter pylori Puno135 12370908 YP_005790540.1 CDS HPPN135_06800 NC_017379.1 1371942 1372319 D hypothetical protein 1371942..1372319 Helicobacter pylori Puno135 12370909 YP_005790541.1 CDS HPPN135_06805 NC_017379.1 1372324 1373562 D hypothetical protein 1372324..1373562 Helicobacter pylori Puno135 12370910 YP_005790542.1 CDS HPPN135_06810 NC_017379.1 1373559 1374566 D COG0845 Membrane-fusion protein; cation efflux system protein (czcA) 1373559..1374566 Helicobacter pylori Puno135 12370911 YP_005790543.1 CDS HPPN135_06815 NC_017379.1 1374567 1377680 D COG3696 Putative silver efflux pump; cation efflux system protein (czcA) 1374567..1377680 Helicobacter pylori Puno135 12370912 YP_005790544.1 CDS HPPN135_06820 NC_017379.1 1377677 1378024 R COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance); hypothetical protein complement(1377677..1378024) Helicobacter pylori Puno135 12370913 YP_005790545.1 CDS HPPN135_06825 NC_017379.1 1378018 1378704 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); branched-chain amino acid transport protein complement(1378018..1378704) Helicobacter pylori Puno135 12370914 YP_005790546.1 CDS HPPN135_06830 NC_017379.1 1378715 1379824 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(1378715..1379824) Helicobacter pylori Puno135 12370915 YP_005790547.1 CDS HPPN135_06835 NC_017379.1 1379948 1381078 D hypothetical protein 1379948..1381078 Helicobacter pylori Puno135 12370916 YP_005790548.1 CDS mnmA NC_017379.1 1381123 1382151 R COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA complement(1381123..1382151) Helicobacter pylori Puno135 12370917 YP_005790549.1 CDS HPPN135_06845 NC_017379.1 1382292 1383053 D COG2214 DnaJ-class molecular chaperone; hypothetical protein 1382292..1383053 Helicobacter pylori Puno135 12370918 YP_005790550.1 CDS HPPN135_06850 NC_017379.1 1383050 1383565 R COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase complement(1383050..1383565) Helicobacter pylori Puno135 12370919 YP_005790551.1 CDS HPPN135_06855 NC_017379.1 1383558 1384004 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator complement(1383558..1384004) Helicobacter pylori Puno135 12370920 YP_005790552.1 CDS HPPN135_06860 NC_017379.1 1384340 1384777 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1384340..1384777 Helicobacter pylori Puno135 12370921 YP_005790553.1 CDS HPPN135_06865 NC_017379.1 1384774 1385163 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 1384774..1385163 Helicobacter pylori Puno135 12370922 YP_005790554.1 CDS HPPN135_06870 NC_017379.1 1385129 1385980 D COG0810 Periplasmic protein TonB, links inner and outer membranes; siderophore-mediated iron transport protein 1385129..1385980 Helicobacter pylori Puno135 12370923 YP_005790555.1 CDS HPPN135_06875 NC_017379.1 1386316 1387044 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(1386316..1387044) Helicobacter pylori Puno135 12370924 YP_005790556.1 CDS HPPN135_06880 NC_017379.1 1387051 1388007 R COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein complement(1387051..1388007) Helicobacter pylori Puno135 12370925 YP_005790557.1 CDS pgk NC_017379.1 1388023 1389231 R COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase complement(1388023..1389231) Helicobacter pylori Puno135 12370926 YP_005790558.1 CDS HPPN135_06890 NC_017379.1 1389247 1390239 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1389247..1390239) Helicobacter pylori Puno135 12370927 YP_005790559.1 CDS HPPN135_06895 NC_017379.1 1390328 1391029 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(1390328..1391029) Helicobacter pylori Puno135 12370928 YP_005790560.1 CDS HPPN135_06900 NC_017379.1 1391026 1391748 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1391026..1391748) Helicobacter pylori Puno135 12370929 YP_005790561.1 CDS HPPN135_06905 NC_017379.1 1391735 1392898 R hypothetical protein complement(1391735..1392898) Helicobacter pylori Puno135 12370930 YP_005790562.1 CDS HPPN135_06910 NC_017379.1 1392905 1394269 R COG0793 Periplasmic protease; protease complement(1392905..1394269) Helicobacter pylori Puno135 12370931 YP_005790563.1 CDS HPPN135_06915 NC_017379.1 1394380 1394613 R adenine specific DNA methyltransferase complement(1394380..1394613) Helicobacter pylori Puno135 12370932 YP_005790564.1 CDS HPPN135_06920 NC_017379.1 1394677 1395573 R hypothetical protein complement(1394677..1395573) Helicobacter pylori Puno135 12370933 YP_005790565.1 CDS HPPN135_06925 NC_017379.1 1395573 1396652 R COG0863 DNA modification methylase; adenine specific DNA methyltransferase (HINFIM) complement(1395573..1396652) Helicobacter pylori Puno135 12370934 YP_005790566.1 CDS HPPN135_06930 NC_017379.1 1396860 1397681 R COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(1396860..1397681) Helicobacter pylori Puno135 12370935 YP_005790567.1 CDS HPPN135_06935 NC_017379.1 1397681 1398691 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1397681..1398691) Helicobacter pylori Puno135 12370936 YP_005790568.1 CDS HPPN135_06940 NC_017379.1 1398681 1399484 R COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase complement(1398681..1399484) Helicobacter pylori Puno135 12370937 YP_005790569.1 CDS HPPN135_06945 NC_017379.1 1399481 1399984 R hypothetical protein complement(1399481..1399984) Helicobacter pylori Puno135 12370938 YP_005790570.1 CDS HPPN135_06950 NC_017379.1 1399997 1400491 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; hypothetical protein complement(1399997..1400491) Helicobacter pylori Puno135 12370939 YP_005790571.1 CDS ubiA NC_017379.1 1400484 1401368 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase complement(1400484..1401368) Helicobacter pylori Puno135 12370940 YP_005790572.1 CDS HPPN135_06960 NC_017379.1 1401397 1402710 R COG0658 Predicted membrane metal-binding protein; competence locus E complement(1401397..1402710) Helicobacter pylori Puno135 12370941 YP_005790573.1 CDS HPPN135_06965 NC_017379.1 1402707 1404173 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(1402707..1404173) Helicobacter pylori Puno135 12370942 YP_005790574.1 CDS HPPN135_06970 NC_017379.1 1404184 1405578 R COG0062 Uncharacterized conserved protein; hypothetical protein complement(1404184..1405578) Helicobacter pylori Puno135 12370943 YP_005790575.1 CDS HPPN135_06975 NC_017379.1 1405581 1406714 R COG0642 Signal transduction histidine kinase; signal-transducing protein, histidine kinase complement(1405581..1406714) Helicobacter pylori Puno135 12370944 YP_005790576.1 CDS HPPN135_06980 NC_017379.1 1406749 1407390 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; putative transcriptional regulator complement(1406749..1407390) Helicobacter pylori Puno135 12370945 YP_005790577.1 CDS HPPN135_06985 NC_017379.1 1407479 1408750 R MboIIR; type IIS restriction enzyme R protein complement(1407479..1408750) Helicobacter pylori Puno135 12370946 YP_005790578.1 CDS HPPN135_06990 NC_017379.1 1408766 1409548 R COG0863 DNA modification methylase; type IIS restriction enzyme M1 protein (mod) complement(1408766..1409548) Helicobacter pylori Puno135 12370947 YP_005790579.1 CDS HPPN135_06995 NC_017379.1 1409535 1410398 R COG0863 DNA modification methylase; type IIS restriction enzyme M2 protein (mod) complement(1409535..1410398) Helicobacter pylori Puno135 12370948 YP_005790580.1 CDS HPPN135_07000 NC_017379.1 1410644 1411114 D Adenine-specific DNA methylase 1410644..1411114 Helicobacter pylori Puno135 12370949 YP_005790581.1 CDS HPPN135_07005 NC_017379.1 1411138 1413117 D COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA methylase 1411138..1413117 Helicobacter pylori Puno135 12370950 YP_005790582.1 CDS HPPN135_07010 NC_017379.1 1413212 1414054 D type II restriction endonuclease 1413212..1414054 Helicobacter pylori Puno135 12370951 YP_005790583.1 CDS HPPN135_07015 NC_017379.1 1414054 1414947 D COG0338 Site-specific DNA methylase; DNA adenine methylase 1414054..1414947 Helicobacter pylori Puno135 12370952 YP_005790584.1 CDS HPPN135_07020 NC_017379.1 1414919 1415389 D Adenine-specific DNA methylase 1414919..1415389 Helicobacter pylori Puno135 12370953 YP_005790585.1 CDS HPPN135_07025 NC_017379.1 1415413 1417158 D COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA methylase 1415413..1417158 Helicobacter pylori Puno135 12370954 YP_005790586.1 CDS HPPN135_07030 NC_017379.1 1417168 1420077 D COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type III restriction enzyme R protein 1417168..1420077 Helicobacter pylori Puno135 12370955 YP_005790587.1 CDS HPPN135_07035 NC_017379.1 1420127 1420873 R COG1792 Cell shape-determining protein; rod shape-determining protein MreC complement(1420127..1420873) Helicobacter pylori Puno135 12370956 YP_005790588.1 CDS HPPN135_07040 NC_017379.1 1420877 1421920 R COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB complement(1420877..1421920) Helicobacter pylori Puno135 12370957 YP_005790589.1 CDS clpX NC_017379.1 1421963 1423309 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1421963..1423309) Helicobacter pylori Puno135 12370958 YP_005790590.1 CDS HPPN135_07050 NC_017379.1 1423311 1424123 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(1423311..1424123) Helicobacter pylori Puno135 12370959 YP_005790591.1 CDS fabZ NC_017379.1 1424126 1424605 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(1424126..1424605) Helicobacter pylori Puno135 12370960 YP_005790592.1 CDS HPPN135_07060 NC_017379.1 1424789 1425178 R COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW complement(1424789..1425178) Helicobacter pylori Puno135 12370961 YP_005790593.1 CDS HPPN135_07065 NC_017379.1 1425394 1425591 D hypothetical protein 1425394..1425591 Helicobacter pylori Puno135 12370962 YP_005790594.1 CDS HPPN135_07070 NC_017379.1 1425582 1426244 D COG4105 DNA uptake lipoprotein; putative lipoprotein 1425582..1426244 Helicobacter pylori Puno135 12370963 YP_005790595.1 CDS HPPN135_07075 NC_017379.1 1426285 1428753 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 1426285..1428753 Helicobacter pylori Puno135 12370964 YP_005790596.1 CDS HPPN135_07080 NC_017379.1 1428762 1429589 D COG0287 Prephenate dehydrogenase; prephenate dehydrogenase 1428762..1429589 Helicobacter pylori Puno135 12370965 YP_005790597.1 CDS HPPN135_07085 NC_017379.1 1429888 1430751 R COG1864 DNA/RNA endonuclease G, NUC1; endonuclease G complement(1429888..1430751) Helicobacter pylori Puno135 12370966 YP_005790598.1 CDS HPPN135_07090 NC_017379.1 1430870 1432708 R COG2189 Adenine specific DNA methylase Mod; putative type III restriction enzyme M protein complement(1430870..1432708) Helicobacter pylori Puno135 12370967 YP_005790599.1 CDS HPPN135_07095 NC_017379.1 1432702 1435044 R COG3421 Uncharacterized protein conserved in bacteria; putative type III restriction enzyme R protein complement(1432702..1435044) Helicobacter pylori Puno135 12370968 YP_005790600.1 CDS HPPN135_07100 NC_017379.1 1435453 1436301 D COG0502 Biotin synthase and related enzymes; biotin synthase 1435453..1436301 Helicobacter pylori Puno135 12370969 YP_005790601.1 CDS HPPN135_07105 NC_017379.1 1436301 1437179 D COG1295 Predicted membrane protein; putative ribonuclease N 1436301..1437179 Helicobacter pylori Puno135 12370970 YP_005790602.1 CDS HPPN135_07110 NC_017379.1 1441699 1441794 D hypothetical protein 1441699..1441794 Helicobacter pylori Puno135 12370973 YP_005790603.1 CDS HPPN135_07115 NC_017379.1 1442280 1442726 D hypothetical protein 1442280..1442726 Helicobacter pylori Puno135 12370974 YP_005790604.1 CDS HPPN135_07130 NC_017379.1 1444705 1445616 D hypothetical protein 1444705..1445616 Helicobacter pylori Puno135 12370975 YP_005790605.1 CDS HPPN135_07135 NC_017379.1 1445731 1446171 R COG0780 Enzyme related to GTP cyclohydrolase I; 7-cyano-7-deazaguanine reductase complement(1445731..1446171) Helicobacter pylori Puno135 12370976 YP_005790606.1 CDS HPPN135_07140 NC_017379.1 1446230 1446571 D COG0799 Uncharacterized homolog of plant Iojap protein; iojap-like protein 1446230..1446571 Helicobacter pylori Puno135 12370977 YP_005790607.1 CDS miaA NC_017379.1 1446642 1447472 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1446642..1447472 Helicobacter pylori Puno135 12370978 YP_005790608.1 CDS HPPN135_07150 NC_017379.1 1447477 1448583 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase 1447477..1448583 Helicobacter pylori Puno135 12370979 YP_005790609.1 CDS HPPN135_07155 NC_017379.1 1448594 1449556 R type II R-M system restriction endonuclease complement(1448594..1449556) Helicobacter pylori Puno135 12370981 YP_005790610.1 CDS HPPN135_07160 NC_017379.1 1449537 1450391 R type II R-M system restriction endonuclease complement(1449537..1450391) Helicobacter pylori Puno135 12370983 YP_005790611.1 CDS murB NC_017379.1 1450395 1451174 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1450395..1451174) Helicobacter pylori Puno135 12370984 YP_005790612.1 CDS fliQ NC_017379.1 1451178 1451444 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(1451178..1451444) Helicobacter pylori Puno135 12370985 YP_005790613.1 CDS fliI NC_017379.1 1451455 1452759 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(1451455..1452759) Helicobacter pylori Puno135 12370986 YP_005790614.1 CDS HPPN135_07180 NC_017379.1 1452760 1453674 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; type IV secretion system ATPase complement(1452760..1453674) Helicobacter pylori Puno135 12370987 YP_005790615.1 CDS ileS NC_017379.1 1453690 1456452 R COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1453690..1456452) Helicobacter pylori Puno135 12370988 YP_005790616.1 CDS HPPN135_07190 NC_017379.1 1456487 1456744 R COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); hypothetical protein complement(1456487..1456744) Helicobacter pylori Puno135 12370989 YP_005790617.1 CDS HPPN135_07195 NC_017379.1 1456846 1457466 D hypothetical protein 1456846..1457466 Helicobacter pylori Puno135 12370990 YP_005790618.1 CDS HPPN135_07200 NC_017379.1 1457753 1458010 R hypothetical protein complement(1457753..1458010) Helicobacter pylori Puno135 12370991 YP_005790619.1 CDS HPPN135_07205 NC_017379.1 1458197 1459270 R COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N complement(1458197..1459270) Helicobacter pylori Puno135 12370992 YP_005790620.1 CDS HPPN135_07210 NC_017379.1 1459267 1460256 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; polysialic acid capsule expression protein (kpsF) complement(1459267..1460256) Helicobacter pylori Puno135 12370993 YP_005790621.1 CDS HPPN135_07215 NC_017379.1 1460240 1462324 R COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; ATP-binding protein complement(1460240..1462324) Helicobacter pylori Puno135 12370994 YP_005790622.1 CDS ksgA NC_017379.1 1462358 1463173 R COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase complement(1462358..1463173) Helicobacter pylori Puno135 12370995 YP_005790623.1 CDS HPPN135_07225 NC_017379.1 1463236 1463373 D hypothetical protein 1463236..1463373 Helicobacter pylori Puno135 12370996 YP_005790624.1 CDS HPPN135_07230 NC_017379.1 1463427 1463621 D hypothetical protein 1463427..1463621 Helicobacter pylori Puno135 12370997 YP_005790625.1 CDS HPPN135_07235 NC_017379.1 1463951 1464043 D hypothetical protein 1463951..1464043 Helicobacter pylori Puno135 12370998 YP_005790626.1 CDS HPPN135_07240 NC_017379.1 1464124 1465290 R COG0732 Restriction endonuclease S subunits; type I R-M system specificity subunit complement(1464124..1465290) Helicobacter pylori Puno135 12370999 YP_005790627.1 CDS HPPN135_07245 NC_017379.1 1465291 1466172 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase complement(1465291..1466172) Helicobacter pylori Puno135 12371000 YP_005790628.1 CDS HPPN135_07250 NC_017379.1 1466175 1467053 R protease IV; endopeptidase IV; COG0616 Periplasmic serine proteases (ClpP class); signal peptide protease IV complement(1466175..1467053) Helicobacter pylori Puno135 12371001 YP_005790629.1 CDS HPPN135_07255 NC_017379.1 1467123 1467383 D hypothetical protein 1467123..1467383 Helicobacter pylori Puno135 12371002 YP_005790630.1 CDS HPPN135_07260 NC_017379.1 1467603 1468145 D hypothetical protein 1467603..1468145 Helicobacter pylori Puno135 12371003 YP_005790631.1 CDS HPPN135_07265 NC_017379.1 1468149 1468583 D hypothetical protein 1468149..1468583 Helicobacter pylori Puno135 12371004 YP_005790632.1 CDS HPPN135_07270 NC_017379.1 1469114 1469269 R hypothetical protein complement(1469114..1469269) Helicobacter pylori Puno135 12371005 YP_005790633.1 CDS HPPN135_07275 NC_017379.1 1471344 1472123 R hypothetical protein complement(1471344..1472123) Helicobacter pylori Puno135 12371007 YP_005790634.1 CDS HPPN135_07280 NC_017379.1 1472247 1472735 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolylcis-transisomeraseB, cyclosporin- type rotamase 1472247..1472735 Helicobacter pylori Puno135 12371008 YP_005790635.1 CDS HPPN135_07285 NC_017379.1 1472753 1472983 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 1472753..1472983 Helicobacter pylori Puno135 12371009 YP_005790636.1 CDS HPPN135_07290 NC_017379.1 1472983 1473786 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1472983..1473786 Helicobacter pylori Puno135 12371010 YP_005790637.1 CDS smpB NC_017379.1 1473783 1474241 D COG0691 tmRNA-binding protein; SsrA-binding protein 1473783..1474241 Helicobacter pylori Puno135 12371011 YP_005790638.1 CDS HPPN135_07300 NC_017379.1 1474244 1474696 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1474244..1474696 Helicobacter pylori Puno135 12371012 YP_005790639.1 CDS HPPN135_07305 NC_017379.1 1474707 1475108 D COG0848 Biopolymer transport protein; biopolymer transport protein 1474707..1475108 Helicobacter pylori Puno135 12371013 YP_005790640.1 CDS rpmH NC_017379.1 1475180 1475314 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 1475180..1475314 Helicobacter pylori Puno135 12371014 YP_005790641.1 CDS HPPN135_07315 NC_017379.1 1475274 1475759 D COG0594 RNase P protein component; ribonuclease P protein component 1475274..1475759 Helicobacter pylori Puno135 12371016 YP_005790642.1 CDS HPPN135_07320 NC_017379.1 1475746 1476099 D COG0759 Uncharacterized conserved protein; hypothetical protein 1475746..1476099 Helicobacter pylori Puno135 12371017 YP_005790643.1 CDS HPPN135_07325 NC_017379.1 1476105 1477742 D COG0706 Preprotein translocase subunit YidC; membrane protein insertase 1476105..1477742 Helicobacter pylori Puno135 12371018 YP_005790644.1 CDS HPPN135_07330 NC_017379.1 1477742 1478548 D COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain; spoIIIJ-associated protein 1477742..1478548 Helicobacter pylori Puno135 12371019 YP_005790645.1 CDS trmE NC_017379.1 1478541 1479893 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1478541..1479893 Helicobacter pylori Puno135 12371020 YP_005790646.1 CDS HPPN135_07340 NC_017379.1 1480100 1482328 D putative Outer membrane protein 1480100..1482328 Helicobacter pylori Puno135 12371021 YP_005790647.1 CDS HPPN135_07345 NC_017379.1 1482508 1482624 R hypothetical protein complement(1482508..1482624) Helicobacter pylori Puno135 12371022 YP_005790648.1 CDS HPPN135_07350 NC_017379.1 1482835 1483746 R hypothetical protein complement(1482835..1483746) Helicobacter pylori Puno135 12371023 YP_005790649.1 CDS HPPN135_07355 NC_017379.1 1483756 1484097 R COG0481 Membrane GTPase LepA; hypothetical protein complement(1483756..1484097) Helicobacter pylori Puno135 12371024 YP_005790650.1 CDS HPPN135_07360 NC_017379.1 1484105 1484632 R membrane-associated lipoprotein complement(1484105..1484632) Helicobacter pylori Puno135 12371025 YP_005790651.1 CDS HPPN135_07365 NC_017379.1 1484656 1485288 R COG3417 Collagen-binding surface adhesin SpaP (antigen I/II family); collagen-binding surface adhesin SpaP complement(1484656..1485288) Helicobacter pylori Puno135 12371026 YP_005790652.1 CDS HPPN135_07370 NC_017379.1 1485652 1485966 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(1485652..1485966) Helicobacter pylori Puno135 12371027 YP_005790653.1 CDS HPPN135_07375 NC_017379.1 1486021 1486794 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; hypothetical protein complement(1486021..1486794) Helicobacter pylori Puno135 12371028 YP_005790654.1 CDS dnaE NC_017379.1 1486791 1490426 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1486791..1490426) Helicobacter pylori Puno135 12371029 YP_005790655.1 CDS HPPN135_07385 NC_017379.1 1490574 1491626 D COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 1490574..1491626 Helicobacter pylori Puno135 12371030 YP_005790656.1 CDS HPPN135_07390 NC_017379.1 1491652 1491843 D hypothetical protein 1491652..1491843 Helicobacter pylori Puno135 12371031 YP_005790657.1 CDS HPPN135_07395 NC_017379.1 1491802 1492389 R COG3187 Heat shock protein; putative secreted motility protein complement(1491802..1492389) Helicobacter pylori Puno135 12371032 YP_005790658.1 CDS HPPN135_07400 NC_017379.1 1492408 1493085 R hypothetical protein complement(1492408..1493085) Helicobacter pylori Puno135 12371033 YP_005790659.1 CDS HPPN135_07405 NC_017379.1 1493088 1493903 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transport system substrate binding protein complement(1493088..1493903) Helicobacter pylori Puno135 12371034 YP_005790660.1 CDS HPPN135_07410 NC_017379.1 1493888 1494673 R COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein complement(1493888..1494673) Helicobacter pylori Puno135 12371035 YP_005790661.1 CDS HPPN135_07415 NC_017379.1 1494673 1495806 R COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; hypothetical protein complement(1494673..1495806) Helicobacter pylori Puno135 12371036 YP_005790662.1 CDS HPPN135_07420 NC_017379.1 1495940 1496635 D outer membrane protein 1495940..1496635 Helicobacter pylori Puno135 12371037 YP_005790663.1 CDS HPPN135_07425 NC_017379.1 1496640 1497662 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(1496640..1497662) Helicobacter pylori Puno135 12371038 YP_005790664.1 CDS HPPN135_07430 NC_017379.1 1497712 1498458 R outer membrane protein (omp31) complement(1497712..1498458) Helicobacter pylori Puno135 12371039 YP_005790665.1 CDS HPPN135_07435 NC_017379.1 1498573 1501248 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I complement(1498573..1501248) Helicobacter pylori Puno135 12371040 YP_005790666.1 CDS HPPN135_07440 NC_017379.1 1501312 1501920 R type II restriction enzyme complement(1501312..1501920) Helicobacter pylori Puno135 12371041 YP_005790667.1 CDS HPPN135_07445 NC_017379.1 1501917 1502555 R type II restriction modification enzyme methyltransferase complement(1501917..1502555) Helicobacter pylori Puno135 12371042 YP_005790668.1 CDS HPPN135_07450 NC_017379.1 1502552 1504591 R COG0286 Type I restriction-modification system methyltransferase subunit; type II restriction modification enzyme methyltransferase complement(1502552..1504591) Helicobacter pylori Puno135 12371043 YP_005790669.1 CDS HPPN135_07455 NC_017379.1 1504623 1505198 R hypothetical protein complement(1504623..1505198) Helicobacter pylori Puno135 12371044 YP_005790670.1 CDS tmk NC_017379.1 1505186 1505761 R COG0125 Thymidylate kinase; thymidylate kinase complement(1505186..1505761) Helicobacter pylori Puno135 12371045 YP_005790671.1 CDS coaD NC_017379.1 1505763 1506236 R COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(1505763..1506236) Helicobacter pylori Puno135 12371046 YP_005790672.1 CDS HPPN135_07470 NC_017379.1 1506236 1506799 R COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1506236..1506799) Helicobacter pylori Puno135 12371047 YP_005790673.1 CDS HPPN135_07475 NC_017379.1 1506780 1506884 D hypothetical protein 1506780..1506884 Helicobacter pylori Puno135 12371048 YP_005790674.1 CDS flgA NC_017379.1 1506809 1507465 R COG4108 Peptide chain release factor RF-3; flagellar basal body P-ring biosynthesis protein FlgA complement(1506809..1507465) Helicobacter pylori Puno135 12371049 YP_005790675.1 CDS HPPN135_07485 NC_017379.1 1507462 1509507 R COG0210 Superfamily I DNA and RNA helicases; DNA helicase II complement(1507462..1509507) Helicobacter pylori Puno135 12371050 YP_005790676.1 CDS HPPN135_07490 NC_017379.1 1509507 1512047 R COG0457 FOG: TPR repeat; hypothetical protein complement(1509507..1512047) Helicobacter pylori Puno135 12371051 YP_005790677.1 CDS HPPN135_07495 NC_017379.1 1512057 1513304 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(1512057..1513304) Helicobacter pylori Puno135 12371052 YP_005790678.1 CDS HPPN135_07500 NC_017379.1 1513305 1514102 R COG0388 Predicted amidohydrolase; hypothetical protein complement(1513305..1514102) Helicobacter pylori Puno135 12371053 YP_005790679.1 CDS HPPN135_07505 NC_017379.1 1514106 1514366 R COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(1514106..1514366) Helicobacter pylori Puno135 12371054 YP_005790680.1 CDS ubiE NC_017379.1 1514376 1515116 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(1514376..1515116) Helicobacter pylori Puno135 12371055 YP_005790681.1 CDS HPPN135_07515 NC_017379.1 1515143 1515589 R COG1981 Predicted membrane protein; hypothetical protein complement(1515143..1515589) Helicobacter pylori Puno135 12371056 YP_005790682.1 CDS HPPN135_07520 NC_017379.1 1515610 1516188 R COG1739 Uncharacterized conserved protein; X-Pro dipeptidase complement(1515610..1516188) Helicobacter pylori Puno135 12371057 YP_005790683.1 CDS HPPN135_07525 NC_017379.1 1516175 1517305 R COG0842 ABC-type multidrug transport system, permease component; antibiotic transport system permease complement(1516175..1517305) Helicobacter pylori Puno135 12371058 YP_005790684.1 CDS HPPN135_07530 NC_017379.1 1517302 1518399 R COG0842 ABC-type multidrug transport system, permease component; hypothetical protein complement(1517302..1518399) Helicobacter pylori Puno135 12371059 YP_005790685.1 CDS HPPN135_07535 NC_017379.1 1518411 1519400 R COG0845 Membrane-fusion protein; secreted protein complement(1518411..1519400) Helicobacter pylori Puno135 12371060 YP_005790686.1 CDS HPPN135_07540 NC_017379.1 1519412 1520944 R COG1538 Outer membrane protein; lipase-like protein complement(1519412..1520944) Helicobacter pylori Puno135 12371061 YP_005790687.1 CDS HPPN135_07545 NC_017379.1 1520941 1522290 R COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein complement(1520941..1522290) Helicobacter pylori Puno135 12371062 YP_005790688.1 CDS HPPN135_07550 NC_017379.1 1522389 1523990 R COG0306 Phosphate/sulphate permeases; phosphate permease complement(1522389..1523990) Helicobacter pylori Puno135 12371063 YP_005790689.1 CDS HPPN135_07555 NC_017379.1 1524131 1524400 D COG0694 Thioredoxin-like proteins and domains; putative nifU-like protein 1524131..1524400 Helicobacter pylori Puno135 12371064 YP_005790690.1 CDS HPPN135_07560 NC_017379.1 1524413 1525024 D hypothetical protein 1524413..1525024 Helicobacter pylori Puno135 12371065 YP_005790691.1 CDS murE NC_017379.1 1525028 1526371 D COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1525028..1526371 Helicobacter pylori Puno135 12371066 YP_005790692.1 CDS HPPN135_07570 NC_017379.1 1526375 1527325 D COG0176 Transaldolase; transaldolase 1526375..1527325 Helicobacter pylori Puno135 12371067 YP_005790693.1 CDS HPPN135_07575 NC_017379.1 1527380 1527916 D COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 1527380..1527916 Helicobacter pylori Puno135 12371068 YP_005790694.1 CDS HPPN135_07580 NC_017379.1 1527927 1528487 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1527927..1528487 Helicobacter pylori Puno135 12371069 YP_005790695.1 CDS HPPN135_07585 NC_017379.1 1528497 1529564 D COG0795 Predicted permeases; hypothetical protein 1528497..1529564 Helicobacter pylori Puno135 12371070 YP_005790696.1 CDS HPPN135_07590 NC_017379.1 1529698 1530864 R outer membrane protein HopK complement(1529698..1530864) Helicobacter pylori Puno135 12371071 YP_005790697.1 CDS HPPN135_07595 NC_017379.1 1530830 1530937 R hypothetical protein complement(1530830..1530937) Helicobacter pylori Puno135 12371072 YP_005790698.1 CDS HPPN135_07600 NC_017379.1 1531044 1531481 D COG3399 Uncharacterized protein conserved in bacteria; hypothetical protein 1531044..1531481 Helicobacter pylori Puno135 12371073 YP_005790699.1 CDS HPPN135_07605 NC_017379.1 1531478 1533859 R COG2217 Cation transport ATPase; putative cation transporting P-type ATPase complement(1531478..1533859) Helicobacter pylori Puno135 12371074 YP_005790700.1 CDS HPPN135_07610 NC_017379.1 1533885 1534601 R COG4123 Predicted O-methyltransferase; hypothetical protein complement(1533885..1534601) Helicobacter pylori Puno135 12371075 YP_005790701.1 CDS HPPN135_07615 NC_017379.1 1534583 1535617 R COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein (ribG) complement(1534583..1535617) Helicobacter pylori Puno135 12371076 YP_005790702.1 CDS HPPN135_07620 NC_017379.1 1535614 1536840 R COG0786 Na+/glutamate symporter; glutamate permease complement(1535614..1536840) Helicobacter pylori Puno135 12371077 YP_005790703.1 CDS HPPN135_07625 NC_017379.1 1536926 1538125 D COG1748 Saccharopine dehydrogenase and related proteins; saccharopine dehydrogenase 1536926..1538125 Helicobacter pylori Puno135 12371078 YP_005790704.1 CDS HPPN135_07630 NC_017379.1 1538135 1539511 R COG0348 Polyferredoxin; ferrodoxin-like protein complement(1538135..1539511) Helicobacter pylori Puno135 12371079 YP_005790705.1 CDS HPPN135_07635 NC_017379.1 1539491 1540279 D COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1539491..1540279 Helicobacter pylori Puno135 12371080 YP_005790706.1 CDS HPPN135_07640 NC_017379.1 1540276 1540629 D COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 1540276..1540629 Helicobacter pylori Puno135 12371081 YP_005790707.1 CDS HPPN135_07645 NC_017379.1 1540613 1540939 D FrpB-like protein 1540613..1540939 Helicobacter pylori Puno135 12371082 YP_005790708.1 CDS HPPN135_07650 NC_017379.1 1541092 1543731 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 1541092..1543731 Helicobacter pylori Puno135 12371083 YP_005790709.1 CDS HPPN135_07655 NC_017379.1 1543958 1545118 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1543958..1545118 Helicobacter pylori Puno135 12371084 YP_005790710.1 CDS nusA NC_017379.1 1545206 1546393 D COG0195 Transcription elongation factor; transcription elongation factor NusA 1545206..1546393 Helicobacter pylori Puno135 12371085 YP_005790711.1 CDS HPPN135_07665 NC_017379.1 1546645 1550412 R COG1002 Type II restriction enzyme, methylase subunits; type IIS restriction-modification protein complement(1546645..1550412) Helicobacter pylori Puno135 12371086 YP_005790712.1 CDS HPPN135_07680 NC_017379.1 1553434 1554021 R COG2189 Adenine specific DNA methylase Mod; type III R-M system modification enzyme complement(1553434..1554021) Helicobacter pylori Puno135 12371087 YP_005790713.1 CDS HPPN135_07685 NC_017379.1 1555507 1557372 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(1555507..1557372) Helicobacter pylori Puno135 12371088 YP_005790714.1 CDS HPPN135_07690 NC_017379.1 1557454 1557798 D hypothetical protein 1557454..1557798 Helicobacter pylori Puno135 12371089 YP_005790715.1 CDS HPPN135_07695 NC_017379.1 1557802 1558437 D hypothetical protein 1557802..1558437 Helicobacter pylori Puno135 12371090 YP_005790716.1 CDS HPPN135_07700 NC_017379.1 1558434 1559186 R COG0708 Exonuclease III; exodeoxyribonuclease III complement(1558434..1559186) Helicobacter pylori Puno135 12371091 YP_005790717.1 CDS HPPN135_07705 NC_017379.1 1559364 1560803 R periplasmic competence protein complement(1559364..1560803) Helicobacter pylori Puno135 12371093 YP_005790718.1 CDS dnaA NC_017379.1 1561037 1562404 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(1561037..1562404) Helicobacter pylori Puno135 12371094 YP_005790719.1 CDS HPPN135_07715 NC_017379.1 1562556 1563092 D COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase 1562556..1563092 Helicobacter pylori Puno135 12371095 YP_005790720.1 CDS HPPN135_07720 NC_017379.1 1563139 1563378 D hypothetical protein 1563139..1563378 Helicobacter pylori Puno135 12371096 YP_005790721.1 CDS HPPN135_07725 NC_017379.1 1563379 1565172 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 1563379..1565172 Helicobacter pylori Puno135 12371097 YP_005790722.1 CDS thyX NC_017379.1 1565193 1565819 D COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 1565193..1565819 Helicobacter pylori Puno135 12371098 YP_005790723.1 CDS HPPN135_07735 NC_017379.1 1566153 1567352 R COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme specificity protein complement(1566153..1567352) Helicobacter pylori Puno135 12371099 YP_005790724.1 CDS HPPN135_07740 NC_017379.1 1567349 1568116 R hypothetical protein complement(1567349..1568116) Helicobacter pylori Puno135 12371100 YP_005790725.1 CDS HPPN135_07745 NC_017379.1 1568204 1570666 R HsdM; COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(1568204..1570666) Helicobacter pylori Puno135 12371101 YP_005790726.1 CDS HPPN135_07750 NC_017379.1 1570736 1573636 D HsdR; COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein 1570736..1573636 Helicobacter pylori Puno135 12371102 YP_005790727.1 CDS HPPN135_07755 NC_017379.1 1573710 1574417 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 1573710..1574417 Helicobacter pylori Puno135 12371103 YP_005790728.1 CDS HPPN135_07760 NC_017379.1 1574507 1577032 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron(III) dicitrate transport protein (fecA) complement(1574507..1577032) Helicobacter pylori Puno135 12371104 YP_005790729.1 CDS HPPN135_07765 NC_017379.1 1577387 1578328 R COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; arginase complement(1577387..1578328) Helicobacter pylori Puno135 12371105 YP_005790730.1 CDS HPPN135_07770 NC_017379.1 1578341 1579768 R COG0833 Amino acid transporters; amino acid permease complement(1578341..1579768) Helicobacter pylori Puno135 12371106 YP_005790731.1 CDS HPPN135_07775 NC_017379.1 1579963 1581105 D COG0686 Alanine dehydrogenase; alanine dehydrogenase 1579963..1581105 Helicobacter pylori Puno135 12371107 YP_005790732.1 CDS HPPN135_07780 NC_017379.1 1581139 1582962 D COG1479 Uncharacterized conserved protein; hypothetical protein 1581139..1582962 Helicobacter pylori Puno135 12371108 YP_005790733.1 CDS HPPN135_07785 NC_017379.1 1582973 1583701 R putative outer membrane protein complement(1582973..1583701) Helicobacter pylori Puno135 12371109 YP_005790734.1 CDS HPPN135_07790 NC_017379.1 1583884 1584738 D COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 1583884..1584738 Helicobacter pylori Puno135 12371110 YP_005790735.1 CDS HPPN135_07795 NC_017379.1 1584751 1586325 D COG0497 ATPase involved in DNA repair; DNA repair protein 1584751..1586325 Helicobacter pylori Puno135 12371111 YP_005790736.1 CDS HPPN135_07800 NC_017379.1 1586322 1587629 D COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; fibronectin/fibrinogen-binding protein 1586322..1587629 Helicobacter pylori Puno135 12371112 YP_005790737.1 CDS HPPN135_07805 NC_017379.1 1587648 1587944 D hypothetical protein 1587648..1587944 Helicobacter pylori Puno135 12371113 YP_005790738.1 CDS HPPN135_07810 NC_017379.1 1588253 1588573 D hypothetical protein 1588253..1588573 Helicobacter pylori Puno135 12371114 YP_005790739.1 CDS HPPN135_07815 NC_017379.1 1588679 1588819 D hypothetical protein 1588679..1588819 Helicobacter pylori Puno135 12371115 YP_005790740.1 CDS HPPN135_07820 NC_017379.1 1588845 1589708 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(1588845..1589708) Helicobacter pylori Puno135 12371116 YP_005790741.1 CDS HPPN135_07825 NC_017379.1 1589686 1590339 R COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase complement(1589686..1590339) Helicobacter pylori Puno135 12371117 YP_005790742.1 CDS HPPN135_07830 NC_017379.1 1590410 1591282 D COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 1590410..1591282 Helicobacter pylori Puno135 12371118 YP_005790743.1 CDS HPPN135_07835 NC_017379.1 1591282 1591485 D hypothetical protein 1591282..1591485 Helicobacter pylori Puno135 12371119 YP_005790744.1 CDS HPPN135_07840 NC_017379.1 1591498 1592394 D COG0827 Adenine-specific DNA methylase; putative type II methylase protein 1591498..1592394 Helicobacter pylori Puno135 12371120 YP_005790745.1 CDS HPPN135_07845 NC_017379.1 1592387 1593118 D COG1160 Predicted GTPases; hypothetical protein 1592387..1593118 Helicobacter pylori Puno135 12371121 YP_005790746.1 CDS HPPN135_07850 NC_017379.1 1593119 1593265 D hypothetical protein 1593119..1593265 Helicobacter pylori Puno135 12371122 YP_005790747.1 CDS HPPN135_07855 NC_017379.1 1593307 1594563 R COG0270 Site-specific DNA methylase; site-specific DNA-methyltransferase complement(1593307..1594563) Helicobacter pylori Puno135 12371123 YP_005790748.1 CDS HPPN135_07860 NC_017379.1 1594553 1595653 R hypothetical protein complement(1594553..1595653) Helicobacter pylori Puno135 12371124 YP_005790749.1 CDS tsf NC_017379.1 1595705 1596772 R COG0264 Translation elongation factor Ts; elongation factor Ts complement(1595705..1596772) Helicobacter pylori Puno135 12371125 YP_005790750.1 CDS rpsB NC_017379.1 1596772 1597566 R COG0052 Ribosomal protein S2; 30S ribosomal protein S2 complement(1596772..1597566) Helicobacter pylori Puno135 12371126 YP_005790751.1 CDS HPPN135_07875 NC_017379.1 1597659 1597745 D hypothetical protein 1597659..1597745 Helicobacter pylori Puno135 12371127 YP_005790752.1 CDS HPPN135_07880 NC_017379.1 1597817 1600666 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); putative recombination protein RecB 1597817..1600666 Helicobacter pylori Puno135 12371128 YP_005790753.1 CDS nhaA NC_017379.1 1600690 1602006 D COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 1600690..1602006 Helicobacter pylori Puno135 12371129 YP_005790754.1 CDS yajC NC_017379.1 1602054 1602347 D COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 1602054..1602347 Helicobacter pylori Puno135 12371130 YP_005790755.1 CDS secD NC_017379.1 1602347 1603924 D COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 1602347..1603924 Helicobacter pylori Puno135 12371131 YP_005790756.1 CDS secF NC_017379.1 1603933 1604904 D COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 1603933..1604904 Helicobacter pylori Puno135 12371132 YP_005790757.1 CDS HPPN135_07905 NC_017379.1 1604914 1605252 D integral membrane protein 1604914..1605252 Helicobacter pylori Puno135 12371133 YP_005790758.1 CDS leuS NC_017379.1 1605262 1607682 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 1605262..1607682 Helicobacter pylori Puno135 12371134 YP_005790759.1 CDS HPPN135_07915 NC_017379.1 1607679 1608191 D hypothetical protein 1607679..1608191 Helicobacter pylori Puno135 12371135 YP_005790760.1 CDS HPPN135_07920 NC_017379.1 1608181 1609350 D COG0285 Folylpolyglutamate synthase; folylpolyglutamate synthase 1608181..1609350 Helicobacter pylori Puno135 12371136 YP_005790761.1 CDS HPPN135_07925 NC_017379.1 1609350 1610276 D COG0739 Membrane proteins related to metalloendopeptidases; membrane-bound metallopeptidase 1609350..1610276 Helicobacter pylori Puno135 12371137 YP_005790762.1 CDS HPPN135_07930 NC_017379.1 1610285 1611220 D TagE; COG0739 Membrane proteins related to metalloendopeptidases; ToxR-activated protein 1610285..1611220 Helicobacter pylori Puno135 12371138 YP_005790763.1 CDS HPPN135_07935 NC_017379.1 1611139 1611549 D COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 1611139..1611549 Helicobacter pylori Puno135 12371139 YP_005790764.1 CDS HPPN135_07940 NC_017379.1 1611553 1614552 D COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 1611553..1614552 Helicobacter pylori Puno135 12371140 YP_005790765.1 CDS HPPN135_07945 NC_017379.1 1614678 1615181 D COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1614678..1615181 Helicobacter pylori Puno135 12371141 YP_005790766.1 CDS HPPN135_07950 NC_017379.1 1615192 1616430 D COG1290 Cytochrome b subunit of the bc complex; ubiquinol-cytochrome c reductase cytochrome b subunit 1615192..1616430 Helicobacter pylori Puno135 12371142 YP_005790767.1 CDS HPPN135_07955 NC_017379.1 1616427 1617284 D COG2857 Cytochrome c1; ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit 1616427..1617284 Helicobacter pylori Puno135 12371143 YP_005790768.1 CDS HPPN135_07960 NC_017379.1 1617490 1618182 R hypothetical protein complement(1617490..1618182) Helicobacter pylori Puno135 12371144 YP_005790769.1 CDS HPPN135_07965 NC_017379.1 1618182 1619285 R COG1106 Predicted ATPases; hypothetical protein complement(1618182..1619285) Helicobacter pylori Puno135 12371145 YP_005790770.1 CDS HPPN135_07970 NC_017379.1 1619329 1619442 R hypothetical protein complement(1619329..1619442) Helicobacter pylori Puno135 12371146 YP_005790771.1 CDS HPPN135_07975 NC_017379.1 1619476 1621320 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; cell division protein complement(1619476..1621320) Helicobacter pylori Puno135 12371147 YP_005790772.1 CDS fliE NC_017379.1 1621473 1621802 R COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE complement(1621473..1621802) Helicobacter pylori Puno135 12371148 YP_005790773.1 CDS flgC NC_017379.1 1621930 1622415 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(1621930..1622415) Helicobacter pylori Puno135 12371149 YP_005790774.1 CDS flgB NC_017379.1 1622428 1622850 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(1622428..1622850) Helicobacter pylori Puno135 12371150 YP_005790775.1 CDS HPPN135_07995 NC_017379.1 1623056 1624222 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 1623056..1624222 Helicobacter pylori Puno135 12371151 YP_005790776.1 CDS HPPN135_08000 NC_017379.1 1624246 1625253 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) complement(1624246..1625253) Helicobacter pylori Puno135 12371152 YP_005790777.1 CDS HPPN135_08005 NC_017379.1 1625452 1626453 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron(III) ABC transporter periplasmic iron-binding protein complement(1625452..1626453) Helicobacter pylori Puno135 12371153 YP_005790778.1 CDS HPPN135_08010 NC_017379.1 1626698 1627294 D COG0450 Peroxiredoxin; putative peroxidase 1626698..1627294 Helicobacter pylori Puno135 12371154 YP_005790779.1 CDS HPPN135_08015 NC_017379.1 1627442 1628257 D COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; outer membrane protein 1627442..1628257 Helicobacter pylori Puno135 12371155 YP_005790780.1 CDS HPPN135_08020 NC_017379.1 1628325 1630100 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(1628325..1630100) Helicobacter pylori Puno135 12371156 YP_005790781.1 CDS HPPN135_08025 NC_017379.1 1630081 1630524 R hypothetical protein complement(1630081..1630524) Helicobacter pylori Puno135 12371157 YP_005790782.1 CDS engB NC_017379.1 1630537 1631163 R COG0218 Predicted GTPase; GTP-binding protein YsxC complement(1630537..1631163) Helicobacter pylori Puno135 12371158 YP_005790783.1 CDS HPPN135_08035 NC_017379.1 1631160 1631717 R COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1631160..1631717) Helicobacter pylori Puno135 12371159 YP_005790784.1 CDS HPPN135_08040 NC_017379.1 1631717 1632310 R hypothetical protein complement(1631717..1632310) Helicobacter pylori Puno135 12371160 YP_005790785.1 CDS HPPN135_08045 NC_017379.1 1632285 1632779 R COG1778 Low specificity phosphatase (HAD superfamily); hypothetical protein complement(1632285..1632779) Helicobacter pylori Puno135 12371161 YP_005790786.1 CDS HPPN135_08050 NC_017379.1 1632776 1633723 R COG0797 Lipoproteins; rare lipoprotein A complement(1632776..1633723) Helicobacter pylori Puno135 12371162 YP_005790787.1 CDS HPPN135_08055 NC_017379.1 1633723 1634835 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D complement(1633723..1634835) Helicobacter pylori Puno135 12371163 YP_005790788.1 CDS HPPN135_08060 NC_017379.1 1634926 1635690 R COG0084 Mg-dependent DNase; Mg-dependent DNase complement(1634926..1635690) Helicobacter pylori Puno135 12371164 YP_005790789.1 CDS HPPN135_08065 NC_017379.1 1635765 1636385 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1635765..1636385 Helicobacter pylori Puno135 12371165 YP_005790790.1 CDS HPPN135_08070 NC_017379.1 1636386 1636658 D COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; FlhB-related flagellar biosynthesis protein 1636386..1636658 Helicobacter pylori Puno135 12371166 YP_005790791.1 CDS metN NC_017379.1 1636680 1637663 D COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 1636680..1637663 Helicobacter pylori Puno135 12371167 YP_005790792.1 CDS HPPN135_08080 NC_017379.1 1637665 1638312 D COG2011 ABC-type metal ion transport system, permease component; ABC transporter permease 1637665..1638312 Helicobacter pylori Puno135 12371168 YP_005790793.1 CDS HPPN135_08085 NC_017379.1 1638500 1638931 R hypothetical protein complement(1638500..1638931) Helicobacter pylori Puno135 12371169 YP_005790794.1 CDS HPPN135_08090 NC_017379.1 1638941 1639537 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(1638941..1639537) Helicobacter pylori Puno135 12371170 YP_005790795.1 CDS HPPN135_08095 NC_017379.1 1639537 1640544 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; undecaprenyl phosphate N-acetylglucosaminyltransferase complement(1639537..1640544) Helicobacter pylori Puno135 12371171 YP_005790796.1 CDS HPPN135_08100 NC_017379.1 1640680 1641468 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 1640680..1641468 Helicobacter pylori Puno135 12371172 YP_005790797.1 CDS pdxA NC_017379.1 1641470 1642393 D COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 1641470..1642393 Helicobacter pylori Puno135 12371173 YP_005790798.1 CDS HPPN135_08110 NC_017379.1 1642377 1642469 R hypothetical protein complement(1642377..1642469) Helicobacter pylori Puno135 12371174 YP_005790799.1 CDS HPPN135_08115 NC_017379.1 1642456 1643478 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 1642456..1643478 Helicobacter pylori Puno135 12371175 YP_005790800.1 CDS flgG NC_017379.1 1643657 1644445 D COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 1643657..1644445 Helicobacter pylori Puno135 12371176 YP_005790801.1 CDS HPPN135_08125 NC_017379.1 1644479 1644616 R hypothetical protein complement(1644479..1644616) Helicobacter pylori Puno135 12371177 YP_005790802.1 CDS HPPN135_08130 NC_017379.1 1644778 1644879 R hypothetical protein complement(1644778..1644879) Helicobacter pylori Puno135 12371178 YP_005790803.1 CDS HPPN135_08135 NC_017379.1 1644908 1645048 R hypothetical protein complement(1644908..1645048) Helicobacter pylori Puno135 12371179 YP_005790804.1 CDS HPPN135_08140 NC_017379.1 1645133 1645894 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1645133..1645894) Helicobacter pylori Puno135 12371180 HPPN135_t08152 tRNA HPPN135_t08152 NC_017379.1 4042 4117 R tRNA-Glu complement(4042..4117) Helicobacter pylori Puno135 12370980 HPPN135_t08154 tRNA HPPN135_t08154 NC_017379.1 4181 4257 R tRNA-Asp complement(4181..4257) Helicobacter pylori Puno135 12370982 HPPN135_t08156 tRNA HPPN135_t08156 NC_017379.1 4298 4373 R tRNA-Val complement(4298..4373) Helicobacter pylori Puno135 12371015 HPPN135_t08158 tRNA HPPN135_t08158 NC_017379.1 4416 4490 R tRNA-Glu complement(4416..4490) Helicobacter pylori Puno135 12369566 HPPN135_t08160 tRNA HPPN135_t08160 NC_017379.1 4501 4576 R tRNA-Lys complement(4501..4576) Helicobacter pylori Puno135 12369567 HPPN135_t08162 tRNA HPPN135_t08162 NC_017379.1 73779 73854 R tRNA-Val complement(73779..73854) Helicobacter pylori Puno135 12369636 HPPN135_t08164 tRNA HPPN135_t08164 NC_017379.1 91151 91242 D tRNA-Ser 91151..91242 Helicobacter pylori Puno135 12369654 HPPN135_t08166 tRNA HPPN135_t08166 NC_017379.1 228350 228424 R tRNA-Asn complement(228350..228424) Helicobacter pylori Puno135 12369791 HPPN135_t08168 tRNA HPPN135_t08168 NC_017379.1 251031 251106 R tRNA-Ala complement(251031..251106) Helicobacter pylori Puno135 12369814 HPPN135_t08170 tRNA HPPN135_t08170 NC_017379.1 333279 333355 D tRNA-Arg 333279..333355 Helicobacter pylori Puno135 12369892 HPPN135_t08172 tRNA HPPN135_t08172 NC_017379.1 386569 386656 R tRNA-Ser complement(386569..386656) Helicobacter pylori Puno135 12369944 HPPN135_t08174 tRNA HPPN135_t08174 NC_017379.1 439384 439461 R tRNA-Pro complement(439384..439461) Helicobacter pylori Puno135 12370002 HPPN135_t08176 tRNA HPPN135_t08176 NC_017379.1 747779 747855 R tRNA-Met complement(747779..747855) Helicobacter pylori Puno135 12370280 HPPN135_t08178 tRNA HPPN135_t08178 NC_017379.1 835999 836075 D tRNA-Arg 835999..836075 Helicobacter pylori Puno135 12370370 HPPN135_t08180 tRNA HPPN135_t08180 NC_017379.1 900382 900458 R tRNA-Met complement(900382..900458) Helicobacter pylori Puno135 12370433 HPPN135_t08182 tRNA HPPN135_t08182 NC_017379.1 900483 900557 R tRNA-Gln complement(900483..900557) Helicobacter pylori Puno135 12370434 HPPN135_t08184 tRNA HPPN135_t08184 NC_017379.1 957325 957399 D tRNA-Gly 957325..957399 Helicobacter pylori Puno135 12370482 HPPN135_t08186 tRNA HPPN135_t08186 NC_017379.1 957795 957881 D tRNA-Leu 957795..957881 Helicobacter pylori Puno135 12370484 HPPN135_t08188 tRNA HPPN135_t08188 NC_017379.1 957956 958030 D tRNA-Cys 957956..958030 Helicobacter pylori Puno135 12370485 HPPN135_t08190 tRNA HPPN135_t08190 NC_017379.1 958078 958165 D tRNA-Ser 958078..958165 Helicobacter pylori Puno135 12370486 HPPN135_t08192 tRNA HPPN135_t08192 NC_017379.1 1081581 1081657 R tRNA-Arg complement(1081581..1081657) Helicobacter pylori Puno135 12370589 HPPN135_t08194 tRNA HPPN135_t08194 NC_017379.1 1081675 1081751 R tRNA-Arg complement(1081675..1081751) Helicobacter pylori Puno135 12370590 HPPN135_t08196 tRNA HPPN135_t08196 NC_017379.1 1081812 1081888 R tRNA-His complement(1081812..1081888) Helicobacter pylori Puno135 12370591 HPPN135_t08198 tRNA HPPN135_t08198 NC_017379.1 1081956 1082033 R tRNA-Pro complement(1081956..1082033) Helicobacter pylori Puno135 12370592 HPPN135_t08200 tRNA HPPN135_t08200 NC_017379.1 1138711 1138795 R tRNA-Leu complement(1138711..1138795) Helicobacter pylori Puno135 12370647 HPPN135_t08202 tRNA HPPN135_t08202 NC_017379.1 1143577 1143653 D tRNA-Ile 1143577..1143653 Helicobacter pylori Puno135 12370653 HPPN135_t08204 tRNA HPPN135_t08204 NC_017379.1 1143668 1143743 D tRNA-Ala 1143668..1143743 Helicobacter pylori Puno135 12370654 HPPN135_t08206 tRNA HPPN135_t08206 NC_017379.1 1236797 1236874 R tRNA-Met complement(1236797..1236874) Helicobacter pylori Puno135 12370747 HPPN135_t08208 tRNA HPPN135_t08208 NC_017379.1 1268763 1268838 R tRNA-Trp complement(1268763..1268838) Helicobacter pylori Puno135 12370772 HPPN135_t08210 tRNA HPPN135_t08210 NC_017379.1 1270396 1270470 R tRNA-Thr complement(1270396..1270470) Helicobacter pylori Puno135 12370775 HPPN135_t08212 tRNA HPPN135_t08212 NC_017379.1 1270501 1270577 R tRNA-Gly complement(1270501..1270577) Helicobacter pylori Puno135 12370776 HPPN135_t08214 tRNA HPPN135_t08214 NC_017379.1 1270593 1270677 R tRNA-Tyr complement(1270593..1270677) Helicobacter pylori Puno135 12370777 HPPN135_t08216 tRNA HPPN135_t08216 NC_017379.1 1270705 1270780 R tRNA-Thr complement(1270705..1270780) Helicobacter pylori Puno135 12370778 HPPN135_t08218 tRNA HPPN135_t08218 NC_017379.1 1276112 1276198 R tRNA-Leu complement(1276112..1276198) Helicobacter pylori Puno135 12370787 HPPN135_t08220 tRNA HPPN135_t08220 NC_017379.1 1276252 1276338 R tRNA-Leu complement(1276252..1276338) Helicobacter pylori Puno135 12370789 HPPN135_t08222 tRNA HPPN135_t08222 NC_017379.1 1559286 1559361 D tRNA-Phe 1559286..1559361 Helicobacter pylori Puno135 12371092 HPPN135_r08224 rRNA HPPN135_r08224 NC_017379.1 1060347 1060464 R 5S ribosomal RNA complement(1060347..1060464) Helicobacter pylori Puno135 12370575 HPPN135_r08232 rRNA HPPN135_r08232 NC_017379.1 1060701 1063578 R 23S ribosomal RNA complement(1060701..1063578) Helicobacter pylori Puno135 12370576 HPPN135_r08228 rRNA HPPN135_r08228 NC_017379.1 1194185 1195693 R 16S ribosomal RNA complement(1194185..1195693) Helicobacter pylori Puno135 12370706 HPPN135_r08226 rRNA HPPN135_r08226 NC_017379.1 1438017 1438134 R 5S ribosomal RNA complement(1438017..1438134) Helicobacter pylori Puno135 12370971 HPPN135_r08234 rRNA HPPN135_r08234 NC_017379.1 1438371 1441248 R 23S ribosomal RNA complement(1438371..1441248) Helicobacter pylori Puno135 12370972 HPPN135_r08230 rRNA HPPN135_r08230 NC_017379.1 1469334 1470842 R 16S ribosomal RNA complement(1469334..1470842) Helicobacter pylori Puno135 12371006