-- dump date 20140619_113839 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 1055528000001 SEQ_END SEQ_END NC_017377.1 12783 12783 DR NC_017377.1; contig end 12783..12783 Helicobacter pylori Puno120 1055528000002 SEQ_END SEQ_END NC_017378.1 1624979 1624979 DR NC_017378.1; contig end 1624979..1624979 Helicobacter pylori Puno120 YP_005787692.1 CDS HPPN120_08134 NC_017377.1 307 1578 D COG5527 Protein involved in initiation of plasmid replication; hypothetical protein 307..1578 Helicobacter pylori Puno120 12284324 YP_005787693.1 CDS HPPN120_08139 NC_017377.1 1655 1819 R hypothetical protein complement(1655..1819) Helicobacter pylori Puno120 12284325 YP_005787694.1 CDS HPPN120_08144 NC_017377.1 2169 2870 R MobD-like protein complement(2169..2870) Helicobacter pylori Puno120 12284326 YP_005787695.1 CDS HPPN120_08149 NC_017377.1 4136 4480 R F5; hypothetical protein complement(4136..4480) Helicobacter pylori Puno120 12284327 YP_005787696.1 CDS HPPN120_08154 NC_017377.1 4680 4961 D hypothetical protein 4680..4961 Helicobacter pylori Puno120 12284328 YP_005787697.1 CDS HPPN120_08159 NC_017377.1 4970 5239 D COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 4970..5239 Helicobacter pylori Puno120 12284329 YP_005787698.1 CDS HPPN120_08164 NC_017377.1 5538 5684 D hypothetical protein 5538..5684 Helicobacter pylori Puno120 12284330 YP_005787699.1 CDS HPPN120_08169 NC_017377.1 6298 7839 D replication initiation protein A 6298..7839 Helicobacter pylori Puno120 12284331 YP_005787700.1 CDS HPPN120_08174 NC_017377.1 7884 8618 D COG3177 Uncharacterized conserved protein; hypothetical protein 7884..8618 Helicobacter pylori Puno120 12284332 YP_005787701.1 CDS HPPN120_08179 NC_017377.1 8675 9382 D COG3177 Uncharacterized conserved protein; hypothetical protein 8675..9382 Helicobacter pylori Puno120 12284333 YP_005787702.1 CDS HPPN120_08184 NC_017377.1 9436 10845 R F4; hypothetical protein complement(9436..10845) Helicobacter pylori Puno120 12284334 YP_005787703.1 CDS HPPN120_08189 NC_017377.1 11156 11254 R hypothetical protein complement(11156..11254) Helicobacter pylori Puno120 12284320 YP_005787704.1 CDS HPPN120_08194 NC_017377.1 11244 11588 R F5; hypothetical protein complement(11244..11588) Helicobacter pylori Puno120 12284321 YP_005787705.1 CDS HPPN120_08199 NC_017377.1 11788 12069 D hypothetical protein 11788..12069 Helicobacter pylori Puno120 12284322 YP_005787706.1 CDS HPPN120_08204 NC_017377.1 12078 12347 D COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 12078..12347 Helicobacter pylori Puno120 12284323 YP_005787707.1 CDS nusB NC_017378.1 11 427 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(11..427) Helicobacter pylori Puno120 12369147 YP_005787708.1 CDS ribH NC_017378.1 429 899 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(429..899) Helicobacter pylori Puno120 12369149 YP_005787709.1 CDS HPPN120_00015 NC_017378.1 909 1739 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(909..1739) Helicobacter pylori Puno120 12369151 YP_005787710.1 CDS HPPN120_00020 NC_017378.1 1726 2391 R COG0288 Carbonic anhydrase; carbonic anhydrase complement(1726..2391) Helicobacter pylori Puno120 12369153 YP_005787711.1 CDS HPPN120_00025 NC_017378.1 2514 3197 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2514..3197 Helicobacter pylori Puno120 12369161 YP_005787712.1 CDS panC NC_017378.1 3198 4028 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 3198..4028 Helicobacter pylori Puno120 12369163 YP_005787713.1 CDS HPPN120_00035 NC_017378.1 5093 6982 R outer membrane protein complement(5093..6982) Helicobacter pylori Puno120 12368000 YP_005787714.1 CDS HPPN120_00040 NC_017378.1 7161 7274 R hypothetical protein complement(7161..7274) Helicobacter pylori Puno120 12368001 YP_005787715.1 CDS groEL NC_017378.1 7373 9013 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(7373..9013) Helicobacter pylori Puno120 12368002 YP_005787716.1 CDS groES NC_017378.1 9038 9394 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(9038..9394) Helicobacter pylori Puno120 12368003 YP_005787717.1 CDS dnaG NC_017378.1 9669 11348 D COG0358 DNA primase (bacterial type); DNA primase 9669..11348 Helicobacter pylori Puno120 12368004 YP_005787718.1 CDS HPPN120_00060 NC_017378.1 11345 12397 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; argininosuccinate synthase 11345..12397 Helicobacter pylori Puno120 12368005 YP_005787719.1 CDS HPPN120_00065 NC_017378.1 12394 12504 D hypothetical protein 12394..12504 Helicobacter pylori Puno120 12368006 YP_005787720.1 CDS HPPN120_00070 NC_017378.1 12489 13316 D hypothetical protein 12489..13316 Helicobacter pylori Puno120 12368007 YP_005787721.1 CDS HPPN120_00075 NC_017378.1 13462 13743 D ComB2 competence protein 13462..13743 Helicobacter pylori Puno120 12368008 YP_005787722.1 CDS HPPN120_00080 NC_017378.1 13743 14006 D hypothetical protein 13743..14006 Helicobacter pylori Puno120 12368009 YP_005787723.1 CDS HPPN120_00085 NC_017378.1 14008 16371 D COG3451 Type IV secretory pathway, VirB4 components; hypothetical protein 14008..16371 Helicobacter pylori Puno120 12368010 YP_005787724.1 CDS HPPN120_00090 NC_017378.1 16712 18052 D COG3014 Uncharacterized protein conserved in bacteria; hypothetical protein 16712..18052 Helicobacter pylori Puno120 12368011 YP_005787725.1 CDS HPPN120_00095 NC_017378.1 18147 19112 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein (cheV) 18147..19112 Helicobacter pylori Puno120 12368012 YP_005787726.1 CDS HPPN120_00100 NC_017378.1 19109 20326 D COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 19109..20326 Helicobacter pylori Puno120 12368013 YP_005787727.1 CDS HPPN120_00105 NC_017378.1 20336 20908 R COG0671 Membrane-associated phospholipid phosphatase; lipid A 1-phosphatase complement(20336..20908) Helicobacter pylori Puno120 12368014 YP_005787728.1 CDS HPPN120_00110 NC_017378.1 20919 22484 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; lipid A phosphoethanolamine transferase complement(20919..22484) Helicobacter pylori Puno120 12368015 YP_005787729.1 CDS HPPN120_00115 NC_017378.1 22658 22792 D hypothetical protein 22658..22792 Helicobacter pylori Puno120 12368016 YP_005787730.1 CDS HPPN120_00120 NC_017378.1 22827 24896 R outer membrane protein HopD complement(22827..24896) Helicobacter pylori Puno120 12368017 YP_005787731.1 CDS gltA NC_017378.1 25409 26689 R COG0372 Citrate synthase; type II citrate synthase complement(25409..26689) Helicobacter pylori Puno120 12368018 YP_005787732.1 CDS HPPN120_00130 NC_017378.1 26884 28161 D COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 26884..28161 Helicobacter pylori Puno120 12368019 YP_005787733.1 CDS HPPN120_00135 NC_017378.1 28233 28760 D hypothetical protein 28233..28760 Helicobacter pylori Puno120 12368020 YP_005787734.1 CDS HPPN120_00140 NC_017378.1 28737 29393 R COG0132 Dethiobiotin synthetase; dethiobiotin synthetase complement(28737..29393) Helicobacter pylori Puno120 12368021 YP_005787735.1 CDS HPPN120_00145 NC_017378.1 29397 29690 R hypothetical protein complement(29397..29690) Helicobacter pylori Puno120 12368022 YP_005787736.1 CDS HPPN120_00150 NC_017378.1 29878 30291 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; putative universal stress global response regulator UspA 29878..30291 Helicobacter pylori Puno120 12368023 YP_005787737.1 CDS HPPN120_00155 NC_017378.1 30306 30581 D COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adapter protein ClpS 30306..30581 Helicobacter pylori Puno120 12368024 YP_005787738.1 CDS HPPN120_00160 NC_017378.1 30581 32803 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent C1p protease (clpA) 30581..32803 Helicobacter pylori Puno120 12368025 YP_005787739.1 CDS HPPN120_00165 NC_017378.1 32793 33143 D COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 32793..33143 Helicobacter pylori Puno120 12368026 YP_005787740.1 CDS HPPN120_00170 NC_017378.1 33154 33456 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 33154..33456 Helicobacter pylori Puno120 12368027 YP_005787741.1 CDS HPPN120_00175 NC_017378.1 33456 34460 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; hypothetical protein 33456..34460 Helicobacter pylori Puno120 12368028 YP_005787742.1 CDS HPPN120_00180 NC_017378.1 34468 35523 D NADH-ubiquinone oxidoreductase subunit 34468..35523 Helicobacter pylori Puno120 12368029 YP_005787743.1 CDS HPPN120_00185 NC_017378.1 35649 36392 D COG3736 Type IV secretory pathway, component VirB8; competence protein 35649..36392 Helicobacter pylori Puno120 12368030 YP_005787744.1 CDS HPPN120_00190 NC_017378.1 36392 37363 D COG3504 Type IV secretory pathway, VirB9 components; comB9 competence protein 36392..37363 Helicobacter pylori Puno120 12368031 YP_005787745.1 CDS HPPN120_00195 NC_017378.1 37356 38492 D COG2948 Type IV secretory pathway, VirB10 components; comB10 competence protein 37356..38492 Helicobacter pylori Puno120 12368032 YP_005787746.1 CDS HPPN120_00200 NC_017378.1 38562 39974 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 38562..39974 Helicobacter pylori Puno120 12368033 YP_005787747.1 CDS HPPN120_00205 NC_017378.1 39989 41134 D COG1089 GDP-D-mannose dehydratase; GDP-D-mannose dehydratase 39989..41134 Helicobacter pylori Puno120 12368034 YP_005787748.1 CDS HPPN120_00210 NC_017378.1 41127 42059 D COG0451 Nucleoside-diphosphate-sugar epimerases; nodulation protein (nolK) 41127..42059 Helicobacter pylori Puno120 12368035 YP_005787749.1 CDS HPPN120_00215 NC_017378.1 42329 43327 R COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein complement(42329..43327) Helicobacter pylori Puno120 12368036 YP_005787750.1 CDS HPPN120_00220 NC_017378.1 43330 45582 R COG0068 Hydrogenase maturation factor; transcriptional regulator (hypF) complement(43330..45582) Helicobacter pylori Puno120 12368037 YP_005787751.1 CDS HPPN120_00225 NC_017378.1 45579 46571 R COG2957 Peptidylarginine deiminase and related enzymes; hypothetical protein complement(45579..46571) Helicobacter pylori Puno120 12368038 YP_005787752.1 CDS HPPN120_00230 NC_017378.1 46623 47321 R COG0863 DNA modification methylase; adenine specific DNA methyltransferase (dpnA) complement(46623..47321) Helicobacter pylori Puno120 12368039 YP_005787753.1 CDS HPPN120_00235 NC_017378.1 47318 48385 R COG0270 Site-specific DNA methylase; cytosine specific DNA methyltransferase complement(47318..48385) Helicobacter pylori Puno120 12368040 YP_005787754.1 CDS HPPN120_00250 NC_017378.1 49644 49736 R adenine/cytosine DNA methyltransferase complement(49644..49736) Helicobacter pylori Puno120 12368041 YP_005787755.1 CDS HPPN120_00255 NC_017378.1 49823 51322 R COG0591 Na+/proline symporter; proline permease (putP) complement(49823..51322) Helicobacter pylori Puno120 12368042 YP_005787756.1 CDS HPPN120_00260 NC_017378.1 51349 54906 R COG0506 Proline dehydrogenase; Proline/pyrroline-5-carboxylate dehydrogenase complement(51349..54906) Helicobacter pylori Puno120 12368043 YP_005787757.1 CDS HPPN120_00265 NC_017378.1 55234 55437 D hypothetical protein 55234..55437 Helicobacter pylori Puno120 12368044 YP_005787758.1 CDS HPPN120_00270 NC_017378.1 55603 55752 R hypothetical protein complement(55603..55752) Helicobacter pylori Puno120 12368045 YP_005787759.1 CDS HPPN120_00275 NC_017378.1 56042 56842 D hypothetical protein 56042..56842 Helicobacter pylori Puno120 12368046 YP_005787760.1 CDS HPPN120_00280 NC_017378.1 56844 57680 D hypothetical protein 56844..57680 Helicobacter pylori Puno120 12368047 YP_005787761.1 CDS HPPN120_00300 NC_017378.1 60133 60447 D hypothetical protein 60133..60447 Helicobacter pylori Puno120 12368048 YP_005787762.1 CDS HPPN120_00305 NC_017378.1 60452 60598 D hypothetical protein 60452..60598 Helicobacter pylori Puno120 12368049 YP_005787763.1 CDS HPPN120_00310 NC_017378.1 60608 61975 D hypothetical protein 60608..61975 Helicobacter pylori Puno120 12368050 YP_005787764.1 CDS HPPN120_00315 NC_017378.1 61945 62370 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; hypothetical protein 61945..62370 Helicobacter pylori Puno120 12368051 YP_005787765.1 CDS HPPN120_00320 NC_017378.1 62372 62722 D hypothetical protein 62372..62722 Helicobacter pylori Puno120 12368052 YP_005787766.1 CDS HPPN120_00325 NC_017378.1 62719 65145 D COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; ATP-binding protein 62719..65145 Helicobacter pylori Puno120 12368053 YP_005787767.1 CDS HPPN120_00330 NC_017378.1 65205 66002 R COG0829 Urease accessory protein UreH; urease accessory protein (ureH) complement(65205..66002) Helicobacter pylori Puno120 12368054 YP_005787768.1 CDS HPPN120_00335 NC_017378.1 66002 66601 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein complement(66002..66601) Helicobacter pylori Puno120 12368055 YP_005787769.1 CDS HPPN120_00340 NC_017378.1 66630 67376 R COG0830 Urease accessory protein UreF; urease accessory protein UreF complement(66630..67376) Helicobacter pylori Puno120 12368056 YP_005787770.1 CDS ureE NC_017378.1 67405 67917 R COG2371 Urease accessory protein UreE; urease accessory protein UreE complement(67405..67917) Helicobacter pylori Puno120 12368057 YP_005787771.1 CDS HPPN120_00350 NC_017378.1 67919 68506 R COG1138 Cytochrome c biogenesis factor; urease accessory protein UreI complement(67919..68506) Helicobacter pylori Puno120 12368058 YP_005787772.1 CDS HPPN120_00355 NC_017378.1 68598 68711 D hypothetical protein 68598..68711 Helicobacter pylori Puno120 12368059 YP_005787773.1 CDS ureB NC_017378.1 68698 70407 R COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta complement(68698..70407) Helicobacter pylori Puno120 12368060 YP_005787774.1 CDS HPPN120_00365 NC_017378.1 70411 71127 R COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha complement(70411..71127) Helicobacter pylori Puno120 12368061 YP_005787775.1 CDS lspA NC_017378.1 71486 71959 R COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase complement(71486..71959) Helicobacter pylori Puno120 12368063 YP_005787776.1 CDS glmM NC_017378.1 71953 73290 R COG1109 Phosphomannomutase; phosphoglucosamine mutase complement(71953..73290) Helicobacter pylori Puno120 12368064 YP_005787777.1 CDS rpsT NC_017378.1 73380 73649 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 73380..73649 Helicobacter pylori Puno120 12368065 YP_005787778.1 CDS prfA NC_017378.1 73765 74823 D COG0216 Protein chain release factor A; peptide chain release factor 1 73765..74823 Helicobacter pylori Puno120 12368066 YP_005787779.1 CDS HPPN120_00390 NC_017378.1 74842 74949 R hypothetical protein complement(74842..74949) Helicobacter pylori Puno120 12368067 YP_005787780.1 CDS HPPN120_00395 NC_017378.1 75206 76057 D outer membrane protein 75206..76057 Helicobacter pylori Puno120 12368068 YP_005787781.1 CDS HPPN120_00400 NC_017378.1 76310 78097 D hypothetical protein 76310..78097 Helicobacter pylori Puno120 12368069 YP_005787782.1 CDS HPPN120_00405 NC_017378.1 78370 80391 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transducer (tlpC) complement(78370..80391) Helicobacter pylori Puno120 12368070 YP_005787783.1 CDS HPPN120_00410 NC_017378.1 80388 80603 R hypothetical protein complement(80388..80603) Helicobacter pylori Puno120 12368071 YP_005787784.1 CDS rpsI NC_017378.1 80557 80946 R COG0103 Ribosomal protein S9; 30S ribosomal protein S9 complement(80557..80946) Helicobacter pylori Puno120 12368072 YP_005787785.1 CDS rplM NC_017378.1 80943 81368 R COG0102 Ribosomal protein L13; 50S ribosomal protein L13 complement(80943..81368) Helicobacter pylori Puno120 12368073 YP_005787786.1 CDS HPPN120_00425 NC_017378.1 81442 81564 R hypothetical protein complement(81442..81564) Helicobacter pylori Puno120 12368074 YP_005787787.1 CDS HPPN120_00430 NC_017378.1 81661 81849 R hypothetical protein complement(81661..81849) Helicobacter pylori Puno120 12368075 YP_005787788.1 CDS HPPN120_00435 NC_017378.1 81855 83207 R COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase complement(81855..83207) Helicobacter pylori Puno120 12368076 YP_005787789.1 CDS HPPN120_00440 NC_017378.1 83261 84634 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein complement(83261..84634) Helicobacter pylori Puno120 12368077 YP_005787790.1 CDS HPPN120_00445 NC_017378.1 84655 86688 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(84655..86688) Helicobacter pylori Puno120 12368078 YP_005787791.1 CDS HPPN120_00450 NC_017378.1 86879 87574 R COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(86879..87574) Helicobacter pylori Puno120 12368079 YP_005787792.1 CDS HPPN120_00455 NC_017378.1 87585 88514 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(87585..88514) Helicobacter pylori Puno120 12368080 YP_005787793.1 CDS HPPN120_00465 NC_017378.1 88953 90059 D COG2958 Uncharacterized protein conserved in bacteria; HrgA protein 88953..90059 Helicobacter pylori Puno120 12368082 YP_005787794.1 CDS HPPN120_00470 NC_017378.1 90063 90884 D COG0863 DNA modification methylase; type II restriction enzyme M protein (hsdM) 90063..90884 Helicobacter pylori Puno120 12368083 YP_005787795.1 CDS HPPN120_00485 NC_017378.1 91900 92430 R hypothetical protein complement(91900..92430) Helicobacter pylori Puno120 12368084 YP_005787796.1 CDS HPPN120_00490 NC_017378.1 92503 93447 D COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 92503..93447 Helicobacter pylori Puno120 12368085 YP_005787797.1 CDS HPPN120_00495 NC_017378.1 93777 94490 R hypothetical protein complement(93777..94490) Helicobacter pylori Puno120 12368086 YP_005787798.1 CDS HPPN120_00500 NC_017378.1 94596 96056 R COG0498 Threonine synthase; threonine synthase complement(94596..96056) Helicobacter pylori Puno120 12368087 YP_005787799.1 CDS HPPN120_00505 NC_017378.1 96259 98286 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein (tlpA) 96259..98286 Helicobacter pylori Puno120 12368088 YP_005787800.1 CDS HPPN120_00510 NC_017378.1 98286 99392 D COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein 98286..99392 Helicobacter pylori Puno120 12368089 YP_005787801.1 CDS HPPN120_00515 NC_017378.1 99509 100270 D hypothetical protein 99509..100270 Helicobacter pylori Puno120 12368090 YP_005787802.1 CDS HPPN120_00520 NC_017378.1 100253 101035 R COG0463 Glycosyltransferases involved in cell wall biogenesis; hypothetical protein complement(100253..101035) Helicobacter pylori Puno120 12368091 YP_005787803.1 CDS HPPN120_00525 NC_017378.1 101152 102357 R COG3440 Predicted restriction endonuclease; restriction endonuclease complement(101152..102357) Helicobacter pylori Puno120 12368092 YP_005787804.1 CDS HPPN120_00530 NC_017378.1 102357 104366 R COG0863 DNA modification methylase; type II restriction-modification system DNA methylase complement(102357..104366) Helicobacter pylori Puno120 12368093 YP_005787805.1 CDS HPPN120_00535 NC_017378.1 104556 106253 R COG0840 Methyl-accepting chemotaxis protein; Methyl-accepting chemotaxis protein tlpB complement(104556..106253) Helicobacter pylori Puno120 12368094 YP_005787806.1 CDS HPPN120_00540 NC_017378.1 106436 108181 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(106436..108181) Helicobacter pylori Puno120 12368095 YP_005787807.1 CDS HPPN120_00545 NC_017378.1 108312 108779 R COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase complement(108312..108779) Helicobacter pylori Puno120 12368096 YP_005787808.1 CDS HPPN120_00550 NC_017378.1 108814 109956 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase complement(108814..109956) Helicobacter pylori Puno120 12368097 YP_005787809.1 CDS HPPN120_00555 NC_017378.1 109977 110894 R COG0031 Cysteine synthase; cysteine synthase B complement(109977..110894) Helicobacter pylori Puno120 12368098 YP_005787810.1 CDS HPPN120_00560 NC_017378.1 111014 111430 D hypothetical protein 111014..111430 Helicobacter pylori Puno120 12368099 YP_005787811.1 CDS dnaK NC_017378.1 111569 113431 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(111569..113431) Helicobacter pylori Puno120 12368100 YP_005787812.1 CDS HPPN120_00570 NC_017378.1 113462 114037 R COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE complement(113462..114037) Helicobacter pylori Puno120 12368101 YP_005787813.1 CDS HPPN120_00575 NC_017378.1 114037 114867 R COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor complement(114037..114867) Helicobacter pylori Puno120 12368102 YP_005787814.1 CDS HPPN120_00580 NC_017378.1 115088 115726 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 115088..115726 Helicobacter pylori Puno120 12368103 YP_005787815.1 CDS HPPN120_00585 NC_017378.1 115747 116043 D hypothetical protein 115747..116043 Helicobacter pylori Puno120 12368104 YP_005787816.1 CDS HPPN120_00590 NC_017378.1 116053 117936 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(116053..117936) Helicobacter pylori Puno120 12368105 YP_005787817.1 CDS HPPN120_00595 NC_017378.1 117996 119540 R COG1344 Flagellin and related hook-associated proteins; flagellin B complement(117996..119540) Helicobacter pylori Puno120 12368106 YP_005787818.1 CDS HPPN120_00600 NC_017378.1 119706 121916 D COG0550 Topoisomerase IA; DNA topoisomerase I 119706..121916 Helicobacter pylori Puno120 12368107 YP_005787819.1 CDS HPPN120_00605 NC_017378.1 121909 122844 D COG0731 Fe-S oxidoreductases; hypothetical protein 121909..122844 Helicobacter pylori Puno120 12368108 YP_005787820.1 CDS HPPN120_00610 NC_017378.1 122994 124058 R hypothetical protein complement(122994..124058) Helicobacter pylori Puno120 12368109 YP_005787821.1 CDS HPPN120_00615 NC_017378.1 124342 125451 R hypothetical protein complement(124342..125451) Helicobacter pylori Puno120 12368110 YP_005787822.1 CDS HPPN120_00620 NC_017378.1 125559 127985 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase complement(125559..127985) Helicobacter pylori Puno120 12368111 YP_005787823.1 CDS HPPN120_00625 NC_017378.1 128190 128303 D hypothetical protein 128190..128303 Helicobacter pylori Puno120 12368112 YP_005787824.1 CDS thrS NC_017378.1 128344 130182 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 128344..130182 Helicobacter pylori Puno120 12368113 YP_005787825.1 CDS infC NC_017378.1 130179 130790 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 130179..130790 Helicobacter pylori Puno120 12368114 YP_005787826.1 CDS rpmI NC_017378.1 130771 130965 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 130771..130965 Helicobacter pylori Puno120 12368115 YP_005787827.1 CDS rplT NC_017378.1 131060 131410 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 131060..131410 Helicobacter pylori Puno120 12368116 YP_005787828.1 CDS HPPN120_00650 NC_017378.1 131610 132470 D hypothetical protein 131610..132470 Helicobacter pylori Puno120 12368117 YP_005787829.1 CDS HPPN120_00655 NC_017378.1 132818 133249 D hypothetical protein 132818..133249 Helicobacter pylori Puno120 12368118 YP_005787830.1 CDS HPPN120_00660 NC_017378.1 133652 134521 D hypothetical protein 133652..134521 Helicobacter pylori Puno120 12368119 YP_005787831.1 CDS HPPN120_00665 NC_017378.1 134761 134910 R hypothetical protein complement(134761..134910) Helicobacter pylori Puno120 12368120 YP_005787832.1 CDS HPPN120_00670 NC_017378.1 135079 135153 D hypothetical protein 135079..135153 Helicobacter pylori Puno120 12368121 YP_005787833.1 CDS HPPN120_00675 NC_017378.1 135390 136757 R COG1760 L-serine deaminase; L-serine deaminase complement(135390..136757) Helicobacter pylori Puno120 12368122 YP_005787834.1 CDS HPPN120_00680 NC_017378.1 136757 137998 R COG0814 Amino acid permeases; hypothetical protein complement(136757..137998) Helicobacter pylori Puno120 12368123 YP_005787835.1 CDS HPPN120_00685 NC_017378.1 138061 138153 D hypothetical protein 138061..138153 Helicobacter pylori Puno120 12368124 YP_005787836.1 CDS HPPN120_00690 NC_017378.1 138180 139529 D COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 138180..139529 Helicobacter pylori Puno120 12368125 YP_005787837.1 CDS HPPN120_00695 NC_017378.1 139608 139742 D hypothetical protein 139608..139742 Helicobacter pylori Puno120 12368126 YP_005787838.1 CDS HPPN120_00700 NC_017378.1 139954 140412 R COG1225 Peroxiredoxin; bacterioferritin comigratory protein complement(139954..140412) Helicobacter pylori Puno120 12368127 YP_005787839.1 CDS HPPN120_00705 NC_017378.1 140422 141057 R COG1556 Uncharacterized conserved protein; hypothetical protein complement(140422..141057) Helicobacter pylori Puno120 12368128 YP_005787840.1 CDS HPPN120_00710 NC_017378.1 141050 142495 R COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; iron-sulfur cluster binding protein complement(141050..142495) Helicobacter pylori Puno120 12368129 YP_005787841.1 CDS HPPN120_00715 NC_017378.1 142524 143252 R COG0247 Fe-S oxidoreductase; hypothetical protein complement(142524..143252) Helicobacter pylori Puno120 12368130 YP_005787842.1 CDS HPPN120_00720 NC_017378.1 143484 145133 D COG1620 L-lactate permease; L-lactate permease 143484..145133 Helicobacter pylori Puno120 12368131 YP_005787843.1 CDS HPPN120_00725 NC_017378.1 145189 146844 D COG1620 L-lactate permease; L-lactate permease (lctP) 145189..146844 Helicobacter pylori Puno120 12368132 YP_005787844.1 CDS HPPN120_00730 NC_017378.1 146868 147737 R COG1194 A/G-specific DNA glycosylase; DNA glycosylase MutY complement(146868..147737) Helicobacter pylori Puno120 12368133 YP_005787845.1 CDS HPPN120_00735 NC_017378.1 147855 149303 R COG0471 Di- and tricarboxylate transporters; C(4)-dicarboxylates and tricarboxylates/succinate antiporter complement(147855..149303) Helicobacter pylori Puno120 12368134 YP_005787846.1 CDS HPPN120_00740 NC_017378.1 149473 150939 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 149473..150939 Helicobacter pylori Puno120 12368135 YP_005787847.1 CDS HPPN120_00745 NC_017378.1 150952 151650 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 150952..151650 Helicobacter pylori Puno120 12368136 YP_005787848.1 CDS HPPN120_00750 NC_017378.1 151661 151879 D cytochrome c oxidase, cbb3-type, CcoQ subunit 151661..151879 Helicobacter pylori Puno120 12368137 YP_005787849.1 CDS HPPN120_00755 NC_017378.1 151881 152759 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c oxidase, cbb3-type subunit III 151881..152759 Helicobacter pylori Puno120 12368138 YP_005787850.1 CDS HPPN120_00760 NC_017378.1 152770 152976 D hypothetical protein 152770..152976 Helicobacter pylori Puno120 12368139 YP_005787851.1 CDS HPPN120_00765 NC_017378.1 152973 153080 D hypothetical protein 152973..153080 Helicobacter pylori Puno120 12368140 YP_005787852.1 CDS HPPN120_00770 NC_017378.1 153158 153661 D COG0443 Molecular chaperone; hypothetical protein 153158..153661 Helicobacter pylori Puno120 12368141 YP_005787853.1 CDS HPPN120_00775 NC_017378.1 153673 154254 D hypothetical protein 153673..154254 Helicobacter pylori Puno120 12368142 YP_005787854.1 CDS HPPN120_00780 NC_017378.1 154342 155109 D hypothetical protein 154342..155109 Helicobacter pylori Puno120 12368143 YP_005787855.1 CDS HPPN120_00785 NC_017378.1 155106 155972 R COG2107 Predicted periplasmic solute-binding protein; hypothetical protein complement(155106..155972) Helicobacter pylori Puno120 12368144 YP_005787856.1 CDS recA NC_017378.1 156071 157114 D COG0468 RecA/RadA recombinase; recombinase A 156071..157114 Helicobacter pylori Puno120 12368145 YP_005787857.1 CDS eno NC_017378.1 157126 158406 D COG0148 Enolase; enolase 157126..158406 Helicobacter pylori Puno120 12368146 YP_005787858.1 CDS HPPN120_00800 NC_017378.1 158399 158674 D hypothetical protein 158399..158674 Helicobacter pylori Puno120 12368147 YP_005787859.1 CDS HPPN120_00805 NC_017378.1 158690 159286 D hypothetical protein 158690..159286 Helicobacter pylori Puno120 12368148 YP_005787860.1 CDS aroK NC_017378.1 159291 159779 D COG0703 Shikimate kinase; shikimate kinase 159291..159779 Helicobacter pylori Puno120 12368149 YP_005787861.1 CDS HPPN120_00815 NC_017378.1 159801 160757 D hypothetical protein 159801..160757 Helicobacter pylori Puno120 12368150 YP_005787862.1 CDS HPPN120_00820 NC_017378.1 160754 161857 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(160754..161857) Helicobacter pylori Puno120 12368151 YP_005787863.1 CDS HPPN120_00825 NC_017378.1 162009 162929 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 162009..162929 Helicobacter pylori Puno120 12368152 YP_005787864.1 CDS HPPN120_00830 NC_017378.1 163697 164419 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(163697..164419) Helicobacter pylori Puno120 12368153 YP_005787865.1 CDS HPPN120_00835 NC_017378.1 164420 165391 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(164420..165391) Helicobacter pylori Puno120 12368154 YP_005787866.1 CDS HPPN120_00840 NC_017378.1 165414 166745 R COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein complement(165414..166745) Helicobacter pylori Puno120 12368155 YP_005787867.1 CDS HPPN120_00845 NC_017378.1 166771 167448 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator complement(166771..167448) Helicobacter pylori Puno120 12368156 YP_005787868.1 CDS HPPN120_00850 NC_017378.1 167679 168143 R hypothetical protein complement(167679..168143) Helicobacter pylori Puno120 12368157 YP_005787869.1 CDS HPPN120_00855 NC_017378.1 168134 168397 R COG0457 FOG: TPR repeat; hypothetical protein complement(168134..168397) Helicobacter pylori Puno120 12368158 YP_005787870.1 CDS HPPN120_00860 NC_017378.1 168430 169710 R COG0826 Collagenase and related proteases; collagenase complement(168430..169710) Helicobacter pylori Puno120 12368159 YP_005787871.1 CDS HPPN120_00865 NC_017378.1 169713 170432 R hypothetical protein complement(169713..170432) Helicobacter pylori Puno120 12368160 YP_005787872.1 CDS prfB NC_017378.1 170507 171598 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(170507..171598) Helicobacter pylori Puno120 12368161 YP_005787873.1 CDS HPPN120_00875 NC_017378.1 171661 172836 R COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein complement(171661..172836) Helicobacter pylori Puno120 12368162 YP_005787874.1 CDS fliR NC_017378.1 172846 173613 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(172846..173613) Helicobacter pylori Puno120 12368163 YP_005787875.1 CDS HPPN120_00885 NC_017378.1 173607 174335 R COG2101 TATA-box binding protein (TBP), component of TFIID and TFIIIB; hypothetical protein complement(173607..174335) Helicobacter pylori Puno120 12368164 YP_005787876.1 CDS HPPN120_00890 NC_017378.1 174717 175616 D COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C 174717..175616 Helicobacter pylori Puno120 12368165 YP_005787877.1 CDS HPPN120_00895 NC_017378.1 175633 176556 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 175633..176556 Helicobacter pylori Puno120 12368166 YP_005787878.1 CDS HPPN120_00900 NC_017378.1 176578 177141 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 176578..177141 Helicobacter pylori Puno120 12368167 YP_005787879.1 CDS HPPN120_00905 NC_017378.1 177270 178298 R COG2089 Sialic acid synthase; sialic acid synthase complement(177270..178298) Helicobacter pylori Puno120 12368168 YP_005787880.1 CDS HPPN120_00910 NC_017378.1 178302 178943 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein complement(178302..178943) Helicobacter pylori Puno120 12368169 YP_005787881.1 CDS HPPN120_00915 NC_017378.1 178943 180217 R COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(178943..180217) Helicobacter pylori Puno120 12368170 YP_005787882.1 CDS HPPN120_00920 NC_017378.1 180357 180452 D hypothetical protein 180357..180452 Helicobacter pylori Puno120 12368171 YP_005787883.1 CDS HPPN120_00925 NC_017378.1 180456 181157 D COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 180456..181157 Helicobacter pylori Puno120 12368172 YP_005787884.1 CDS lysS NC_017378.1 181167 182672 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 181167..182672 Helicobacter pylori Puno120 12368173 YP_005787885.1 CDS HPPN120_00935 NC_017378.1 182672 183922 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 182672..183922 Helicobacter pylori Puno120 12368174 YP_005787886.1 CDS HPPN120_00940 NC_017378.1 183933 184475 D hypothetical protein 183933..184475 Helicobacter pylori Puno120 12368175 YP_005787887.1 CDS HPPN120_00945 NC_017378.1 184497 185306 D hypothetical protein 184497..185306 Helicobacter pylori Puno120 12368176 YP_005787888.1 CDS HPPN120_00960 NC_017378.1 187671 188207 D COG2862 Predicted membrane protein; hypothetical protein 187671..188207 Helicobacter pylori Puno120 12368177 YP_005787889.1 CDS HPPN120_00965 NC_017378.1 188213 189598 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; hypothetical protein complement(188213..189598) Helicobacter pylori Puno120 12368178 YP_005787890.1 CDS frdB NC_017378.1 189742 190479 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit complement(189742..190479) Helicobacter pylori Puno120 12368179 YP_005787891.1 CDS HPPN120_00975 NC_017378.1 190472 192616 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit complement(190472..192616) Helicobacter pylori Puno120 12368180 YP_005787892.1 CDS HPPN120_00980 NC_017378.1 192626 193393 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; fumarate reductase cytochrome b-556 subunit complement(192626..193393) Helicobacter pylori Puno120 12368181 YP_005787893.1 CDS tpiA NC_017378.1 193607 194311 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 193607..194311 Helicobacter pylori Puno120 12368182 YP_005787894.1 CDS HPPN120_00990 NC_017378.1 194321 195154 D COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 194321..195154 Helicobacter pylori Puno120 12368183 YP_005787895.1 CDS lpxD NC_017378.1 195154 196164 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 195154..196164 Helicobacter pylori Puno120 12368184 YP_005787896.1 CDS HPPN120_01000 NC_017378.1 196229 197386 D COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 196229..197386 Helicobacter pylori Puno120 12368185 YP_005787897.1 CDS ndk NC_017378.1 197452 197865 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase/apyrimidinic endonuclease/3'-phosphodiesterase 197452..197865 Helicobacter pylori Puno120 12368186 YP_005787898.1 CDS HPPN120_01010 NC_017378.1 197890 198246 D hypothetical protein 197890..198246 Helicobacter pylori Puno120 12368187 YP_005787899.1 CDS rpmF NC_017378.1 198262 198408 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 198262..198408 Helicobacter pylori Puno120 12368188 YP_005787900.1 CDS HPPN120_01020 NC_017378.1 198476 199495 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative phosphate acyltransferase 198476..199495 Helicobacter pylori Puno120 12368189 YP_005787901.1 CDS HPPN120_01025 NC_017378.1 199519 200511 D COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 199519..200511 Helicobacter pylori Puno120 12368190 YP_005787902.1 CDS HPPN120_01030 NC_017378.1 200532 200834 D hypothetical protein 200532..200834 Helicobacter pylori Puno120 12368191 YP_005787903.1 CDS HPPN120_01035 NC_017378.1 201134 201523 R hypothetical protein complement(201134..201523) Helicobacter pylori Puno120 12368192 YP_005787904.1 CDS HPPN120_01040 NC_017378.1 201568 204630 R COG3593 Predicted ATP-dependent endonuclease of the OLD family; hypothetical protein complement(201568..204630) Helicobacter pylori Puno120 12368193 YP_005787905.1 CDS HPPN120_01045 NC_017378.1 204730 205836 D COG0489 ATPases involved in chromosome partitioning; ATP-binding protein 204730..205836 Helicobacter pylori Puno120 12368194 YP_005787906.1 CDS HPPN120_01050 NC_017378.1 205850 206890 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glycosyltransferase complement(205850..206890) Helicobacter pylori Puno120 12368195 YP_005787907.1 CDS HPPN120_01055 NC_017378.1 206914 207027 R LPS 1,2-glycosyltransferase complement(206914..207027) Helicobacter pylori Puno120 12368196 YP_005787908.1 CDS HPPN120_01060 NC_017378.1 207186 208538 D hypothetical protein 207186..208538 Helicobacter pylori Puno120 12368197 YP_005787909.1 CDS HPPN120_01065 NC_017378.1 208642 210507 D COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 208642..210507 Helicobacter pylori Puno120 12368198 YP_005787910.1 CDS HPPN120_01070 NC_017378.1 210530 210673 D hypothetical protein 210530..210673 Helicobacter pylori Puno120 12368199 YP_005787911.1 CDS HPPN120_01075 NC_017378.1 210704 211456 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(210704..211456) Helicobacter pylori Puno120 12368200 YP_005787912.1 CDS HPPN120_01080 NC_017378.1 211542 212693 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(211542..212693) Helicobacter pylori Puno120 12368201 YP_005787913.1 CDS HPPN120_01085 NC_017378.1 212704 214569 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(212704..214569) Helicobacter pylori Puno120 12368202 YP_005787914.1 CDS HPPN120_01090 NC_017378.1 214665 216323 D COG0471 Di- and tricarboxylate transporters; sodium-dependent transporter 214665..216323 Helicobacter pylori Puno120 12368203 YP_005787915.1 CDS HPPN120_01095 NC_017378.1 216336 217136 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 216336..217136 Helicobacter pylori Puno120 12368204 YP_005787916.1 CDS HPPN120_01100 NC_017378.1 217137 218243 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 217137..218243 Helicobacter pylori Puno120 12368205 YP_005787917.1 CDS HPPN120_01115 NC_017378.1 219451 220002 R COG1881 Phospholipid-binding protein; phospholipid-binding protein complement(219451..220002) Helicobacter pylori Puno120 12368206 YP_005787918.1 CDS HPPN120_01120 NC_017378.1 220146 220607 D hypothetical protein 220146..220607 Helicobacter pylori Puno120 12368207 YP_005787919.1 CDS HPPN120_01125 NC_017378.1 220781 221944 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 220781..221944 Helicobacter pylori Puno120 12368208 YP_005787920.1 CDS HPPN120_01130 NC_017378.1 221966 222946 D COG0822 NifU homolog involved in Fe-S cluster formation; nifU-like protein 221966..222946 Helicobacter pylori Puno120 12368209 YP_005787921.1 CDS HPPN120_01135 NC_017378.1 223102 223335 D hypothetical protein 223102..223335 Helicobacter pylori Puno120 12368210 YP_005787922.1 CDS HPPN120_01140 NC_017378.1 223448 224794 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 223448..224794 Helicobacter pylori Puno120 12368211 YP_005787923.1 CDS HPPN120_01145 NC_017378.1 224918 225997 D COG0225 Peptide methionine sulfoxide reductase; bifunctional methionine sulfoxide reductase A/B 224918..225997 Helicobacter pylori Puno120 12368212 YP_005787924.1 CDS HPPN120_01150 NC_017378.1 226455 227288 R COG0730 Predicted permeases; hypothetical protein complement(226455..227288) Helicobacter pylori Puno120 12368213 YP_005787925.1 CDS HPPN120_01155 NC_017378.1 227507 229594 R hypothetical protein complement(227507..229594) Helicobacter pylori Puno120 12368214 YP_005787926.1 CDS HPPN120_01160 NC_017378.1 229843 231000 D COG0659 Sulfate permease and related transporters (MFS superfamily); putative sulfate permease 229843..231000 Helicobacter pylori Puno120 12368215 YP_005787927.1 CDS HPPN120_01170 NC_017378.1 231237 232688 R outer membrane protein (omp6) complement(231237..232688) Helicobacter pylori Puno120 12368217 YP_005787928.1 CDS HPPN120_01175 NC_017378.1 232883 233614 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(232883..233614) Helicobacter pylori Puno120 12368218 YP_005787929.1 CDS HPPN120_01180 NC_017378.1 233727 234524 D COG1651 Protein-disulfide isomerase; hypothetical protein 233727..234524 Helicobacter pylori Puno120 12368219 YP_005787930.1 CDS HPPN120_01185 NC_017378.1 234540 235190 D hypothetical protein 234540..235190 Helicobacter pylori Puno120 12368220 YP_005787931.1 CDS HPPN120_01190 NC_017378.1 235215 236387 D COG0754 Glutathionylspermidine synthase; hypothetical protein 235215..236387 Helicobacter pylori Puno120 12368221 YP_005787932.1 CDS HPPN120_01195 NC_017378.1 236387 236917 D hypothetical protein 236387..236917 Helicobacter pylori Puno120 12368222 YP_005787933.1 CDS HPPN120_01200 NC_017378.1 237354 238421 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(237354..238421) Helicobacter pylori Puno120 12368223 YP_005787934.1 CDS HPPN120_01205 NC_017378.1 238515 238883 R hypothetical protein complement(238515..238883) Helicobacter pylori Puno120 12368224 YP_005787935.1 CDS hemC NC_017378.1 238883 239803 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(238883..239803) Helicobacter pylori Puno120 12368225 YP_005787936.1 CDS HPPN120_01215 NC_017378.1 239814 241547 R COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(239814..241547) Helicobacter pylori Puno120 12368226 YP_005787937.1 CDS hemA NC_017378.1 241551 242900 R COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(241551..242900) Helicobacter pylori Puno120 12368227 YP_005787938.1 CDS HPPN120_01225 NC_017378.1 242900 243823 R COG0142 Geranylgeranyl pyrophosphate synthase; putative octaprenyl-diphosphate synthase complement(242900..243823) Helicobacter pylori Puno120 12368228 YP_005787939.1 CDS HPPN120_01230 NC_017378.1 243833 244228 R hypothetical protein complement(243833..244228) Helicobacter pylori Puno120 12368229 YP_005787940.1 CDS HPPN120_01235 NC_017378.1 244221 244505 R hypothetical protein complement(244221..244505) Helicobacter pylori Puno120 12368230 YP_005787941.1 CDS HPPN120_01240 NC_017378.1 244526 244960 R COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); starvation-inducible DNA-binding protein complement(244526..244960) Helicobacter pylori Puno120 12368231 YP_005787942.1 CDS HPPN120_01245 NC_017378.1 245165 246310 R COG0642 Signal transduction histidine kinase; histidine kinase sensor protein complement(245165..246310) Helicobacter pylori Puno120 12368232 YP_005787943.1 CDS HPPN120_01250 NC_017378.1 246307 246624 R hypothetical protein complement(246307..246624) Helicobacter pylori Puno120 12368233 YP_005787944.1 CDS flgI NC_017378.1 246621 247649 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(246621..247649) Helicobacter pylori Puno120 12368234 YP_005787945.1 CDS HPPN120_01260 NC_017378.1 247838 249316 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase 247838..249316 Helicobacter pylori Puno120 12368235 YP_005787946.1 CDS HPPN120_01265 NC_017378.1 249337 250425 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 249337..250425 Helicobacter pylori Puno120 12368236 YP_005787947.1 CDS HPPN120_01270 NC_017378.1 250432 250971 D hypothetical protein 250432..250971 Helicobacter pylori Puno120 12368237 YP_005787948.1 CDS HPPN120_01275 NC_017378.1 251048 252598 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; oligopeptide permease ATPase protein complement(251048..252598) Helicobacter pylori Puno120 12368238 YP_005787949.1 CDS HPPN120_01280 NC_017378.1 252608 253630 R COG4239 ABC-type uncharacterized transport system, permease component; oligopeptide permease integral membrane protein complement(252608..253630) Helicobacter pylori Puno120 12368239 YP_005787950.1 CDS HPPN120_01285 NC_017378.1 253891 253989 D hypothetical protein 253891..253989 Helicobacter pylori Puno120 12368241 YP_005787951.1 CDS HPPN120_01290 NC_017378.1 253970 255412 D Outer membrane protein HopF 253970..255412 Helicobacter pylori Puno120 12368242 YP_005787952.1 CDS HPPN120_01295 NC_017378.1 255425 256840 D putative Outer membrane protein 255425..256840 Helicobacter pylori Puno120 12368243 YP_005787953.1 CDS HPPN120_01300 NC_017378.1 256939 258174 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 256939..258174 Helicobacter pylori Puno120 12368244 YP_005787954.1 CDS HPPN120_01305 NC_017378.1 258171 258599 D hypothetical protein 258171..258599 Helicobacter pylori Puno120 12368245 YP_005787955.1 CDS HPPN120_01310 NC_017378.1 258592 259251 D COG3334 Uncharacterized conserved protein; hypothetical protein 258592..259251 Helicobacter pylori Puno120 12368246 YP_005787956.1 CDS HPPN120_01315 NC_017378.1 259251 260297 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein 259251..260297 Helicobacter pylori Puno120 12368247 YP_005787957.1 CDS xseA NC_017378.1 260310 261572 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 260310..261572 Helicobacter pylori Puno120 12368248 YP_005787958.1 CDS HPPN120_01325 NC_017378.1 261779 262468 D Endonuclease MjaVIP 261779..262468 Helicobacter pylori Puno120 12368249 YP_005787959.1 CDS HPPN120_01330 NC_017378.1 262465 263223 D COG0863 DNA modification methylase; adenine specific DNA methyltransferase (hpaim) 262465..263223 Helicobacter pylori Puno120 12368250 YP_005787960.1 CDS HPPN120_01335 NC_017378.1 263296 265866 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease binding subunit (clpB) 263296..265866 Helicobacter pylori Puno120 12368251 YP_005787961.1 CDS HPPN120_01340 NC_017378.1 265923 266642 D COG0785 Cytochrome c biogenesis protein; cytochrome c biogenesis protein 265923..266642 Helicobacter pylori Puno120 12368252 YP_005787962.1 CDS HPPN120_01345 NC_017378.1 266652 267788 D COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 266652..267788 Helicobacter pylori Puno120 12368253 YP_005787963.1 CDS HPPN120_01350 NC_017378.1 267773 269002 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; chlorohydrolase 267773..269002 Helicobacter pylori Puno120 12368254 YP_005787964.1 CDS HPPN120_01355 NC_017378.1 269062 269304 D hypothetical protein 269062..269304 Helicobacter pylori Puno120 12368255 YP_005787965.1 CDS HPPN120_01360 NC_017378.1 269314 270627 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 269314..270627 Helicobacter pylori Puno120 12368256 YP_005787966.1 CDS HPPN120_01365 NC_017378.1 270667 271320 D COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein 270667..271320 Helicobacter pylori Puno120 12368257 YP_005787967.1 CDS HPPN120_01370 NC_017378.1 271313 272293 D hypothetical protein 271313..272293 Helicobacter pylori Puno120 12368258 YP_005787968.1 CDS HPPN120_01375 NC_017378.1 272283 272816 D hypothetical protein 272283..272816 Helicobacter pylori Puno120 12368259 YP_005787969.1 CDS HPPN120_01380 NC_017378.1 272813 273352 D hypothetical protein 272813..273352 Helicobacter pylori Puno120 12368260 YP_005787970.1 CDS HPPN120_01385 NC_017378.1 273369 273767 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 273369..273767 Helicobacter pylori Puno120 12368261 YP_005787971.1 CDS HPPN120_01390 NC_017378.1 273804 275096 D COG0457 FOG: TPR repeat; ATP-dependent nuclease 273804..275096 Helicobacter pylori Puno120 12368262 YP_005787972.1 CDS HPPN120_01395 NC_017378.1 275084 275626 D COG0134 Indole-3-glycerol phosphate synthase; hypothetical protein 275084..275626 Helicobacter pylori Puno120 12368263 YP_005787973.1 CDS HPPN120_01400 NC_017378.1 275697 275951 D COG1145 Ferredoxin; putative 4Fe-4S ferredoxin-type protein 275697..275951 Helicobacter pylori Puno120 12368264 YP_005787974.1 CDS HPPN120_01405 NC_017378.1 275961 277415 D COG0248 Exopolyphosphatase; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 275961..277415 Helicobacter pylori Puno120 12368265 YP_005787975.1 CDS HPPN120_01410 NC_017378.1 277412 278422 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase-1 277412..278422 Helicobacter pylori Puno120 12368266 YP_005787976.1 CDS HPPN120_01415 NC_017378.1 278419 279405 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 278419..279405 Helicobacter pylori Puno120 12368267 YP_005787977.1 CDS tgt NC_017378.1 279461 280576 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(279461..280576) Helicobacter pylori Puno120 12368268 YP_005787978.1 CDS HPPN120_01425 NC_017378.1 280633 282069 D COG3400 Uncharacterized protein conserved in bacteria; hypothetical protein 280633..282069 Helicobacter pylori Puno120 12368269 YP_005787979.1 CDS aroB NC_017378.1 282074 283105 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 282074..283105 Helicobacter pylori Puno120 12368270 YP_005787980.1 CDS HPPN120_01435 NC_017378.1 283096 284661 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 283096..284661 Helicobacter pylori Puno120 12368271 YP_005787981.1 CDS HPPN120_01440 NC_017378.1 284658 285914 D COG0621 2-methylthioadenine synthetase; hypothetical protein 284658..285914 Helicobacter pylori Puno120 12368272 YP_005787982.1 CDS HPPN120_01445 NC_017378.1 285901 287553 D COG0465 ATP-dependent Zn proteases; cell division protein (ftsH) 285901..287553 Helicobacter pylori Puno120 12368273 YP_005787983.1 CDS HPPN120_01450 NC_017378.1 287556 288074 D hypothetical protein 287556..288074 Helicobacter pylori Puno120 12368274 YP_005787984.1 CDS HPPN120_01455 NC_017378.1 288087 288560 D hypothetical protein 288087..288560 Helicobacter pylori Puno120 12368275 YP_005787985.1 CDS HPPN120_01475 NC_017378.1 297372 298589 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 297372..298589 Helicobacter pylori Puno120 12368276 YP_005787986.1 CDS HPPN120_01480 NC_017378.1 298594 298884 D COG1605 Chorismate mutase; hypothetical protein 298594..298884 Helicobacter pylori Puno120 12368277 YP_005787987.1 CDS HPPN120_01485 NC_017378.1 298897 299769 D COG4866 Uncharacterized conserved protein; hypothetical protein 298897..299769 Helicobacter pylori Puno120 12368278 YP_005787988.1 CDS HPPN120_01490 NC_017378.1 299770 301449 D COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthetase 299770..301449 Helicobacter pylori Puno120 12368279 YP_005787989.1 CDS amiE NC_017378.1 301642 302661 D COG0388 Predicted amidohydrolase; acylamide amidohydrolase 301642..302661 Helicobacter pylori Puno120 12368280 YP_005787990.1 CDS flgL NC_017378.1 302740 305226 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(302740..305226) Helicobacter pylori Puno120 12368281 YP_005787991.1 CDS rplU NC_017378.1 305549 305863 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 305549..305863 Helicobacter pylori Puno120 12368282 YP_005787992.1 CDS rpmA NC_017378.1 305878 306144 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 305878..306144 Helicobacter pylori Puno120 12368283 YP_005787993.1 CDS HPPN120_01515 NC_017378.1 306297 307907 D COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide ABC transporter, periplasmic dipeptide-binding protein (dppA) 306297..307907 Helicobacter pylori Puno120 12368284 YP_005787994.1 CDS HPPN120_01520 NC_017378.1 307918 308922 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide permease protein 307918..308922 Helicobacter pylori Puno120 12368285 YP_005787995.1 CDS HPPN120_01525 NC_017378.1 308922 309779 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide transport system permease 308922..309779 Helicobacter pylori Puno120 12368286 YP_005787996.1 CDS HPPN120_01530 NC_017378.1 309791 310654 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; dipeptide ABC transporter 309791..310654 Helicobacter pylori Puno120 12368287 YP_005787997.1 CDS HPPN120_01535 NC_017378.1 310651 311457 D COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide transport system atp-binding protein 310651..311457 Helicobacter pylori Puno120 12368288 YP_005787998.1 CDS obgE NC_017378.1 311477 312559 D COG0536 Predicted GTPase; GTPase CgtA 311477..312559 Helicobacter pylori Puno120 12368289 YP_005787999.1 CDS HPPN120_01545 NC_017378.1 312601 313596 D hypothetical protein 312601..313596 Helicobacter pylori Puno120 12368290 YP_005788000.1 CDS HPPN120_01550 NC_017378.1 313845 314399 D hypothetical protein 313845..314399 Helicobacter pylori Puno120 12368291 YP_005788001.1 CDS HPPN120_01555 NC_017378.1 314409 315701 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 314409..315701 Helicobacter pylori Puno120 12368292 YP_005788002.1 CDS HPPN120_01560 NC_017378.1 315706 315963 D hypothetical protein 315706..315963 Helicobacter pylori Puno120 12368293 YP_005788003.1 CDS HPPN120_01565 NC_017378.1 315979 316383 D hypothetical protein 315979..316383 Helicobacter pylori Puno120 12368294 YP_005788004.1 CDS HPPN120_01570 NC_017378.1 316467 317345 D COG0388 Predicted amidohydrolase; N-carbamoyl-D-amino acid amidohydrolase 316467..317345 Helicobacter pylori Puno120 12368295 YP_005788005.1 CDS HPPN120_01575 NC_017378.1 317358 318239 D COG0726 Predicted xylanase/chitin deacetylase; hypothetical protein 317358..318239 Helicobacter pylori Puno120 12368296 YP_005788006.1 CDS HPPN120_01580 NC_017378.1 318291 318983 R type II restriction enzyme complement(318291..318983) Helicobacter pylori Puno120 12368297 YP_005788007.1 CDS HPPN120_01585 NC_017378.1 318994 320103 R COG0863 DNA modification methylase; DNA methylase complement(318994..320103) Helicobacter pylori Puno120 12368298 YP_005788008.1 CDS HPPN120_01590 NC_017378.1 320199 320558 D hypothetical protein 320199..320558 Helicobacter pylori Puno120 12368299 YP_005788009.1 CDS HPPN120_01595 NC_017378.1 320558 321523 D COG0523 Putative GTPases (G3E family); ATP-binding protein 320558..321523 Helicobacter pylori Puno120 12368300 YP_005788010.1 CDS HPPN120_01600 NC_017378.1 321529 322674 R COG0477 Permeases of the major facilitator superfamily; nitrite extrusion protein (narK) complement(321529..322674) Helicobacter pylori Puno120 12368301 YP_005788011.1 CDS HPPN120_01605 NC_017378.1 322840 323025 D hypothetical protein 322840..323025 Helicobacter pylori Puno120 12368302 YP_005788012.1 CDS HPPN120_01610 NC_017378.1 323077 323172 D hypothetical protein 323077..323172 Helicobacter pylori Puno120 12368303 YP_005788013.1 CDS HPPN120_01615 NC_017378.1 323160 323915 R COG0748 Putative heme iron utilization protein; putative heme iron utilization protein complement(323160..323915) Helicobacter pylori Puno120 12368304 YP_005788014.1 CDS argS NC_017378.1 323976 325601 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(323976..325601) Helicobacter pylori Puno120 12368305 YP_005788015.1 CDS HPPN120_01625 NC_017378.1 325604 325843 R COG1826 Sec-independent protein secretion pathway components; Sec-independent protein translocase protein tatA/E-like protein complement(325604..325843) Helicobacter pylori Puno120 12368306 YP_005788016.1 CDS gmk NC_017378.1 325913 326533 R COG0194 Guanylate kinase; guanylate kinase complement(325913..326533) Helicobacter pylori Puno120 12368307 YP_005788017.1 CDS HPPN120_01635 NC_017378.1 326526 328172 R poly E-rich protein complement(326526..328172) Helicobacter pylori Puno120 12368308 YP_005788018.1 CDS HPPN120_01640 NC_017378.1 328176 328718 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; nuclease NucT 328176..328718 Helicobacter pylori Puno120 12368309 YP_005788019.1 CDS HPPN120_01645 NC_017378.1 328725 329462 R outer membrane protein HorC complement(328725..329462) Helicobacter pylori Puno120 12368310 YP_005788020.1 CDS flgH NC_017378.1 329592 330305 D COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 329592..330305 Helicobacter pylori Puno120 12368311 YP_005788021.1 CDS HPPN120_01655 NC_017378.1 330324 331007 D COG1083 CMP-N-acetylneuraminic acid synthetase; CMP-N-acetylneuraminic acid synthetase 330324..331007 Helicobacter pylori Puno120 12368312 YP_005788022.1 CDS HPPN120_01660 NC_017378.1 330998 331870 D COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase; CMP-N-acetylneuraminic acid synthetase (neuA) 330998..331870 Helicobacter pylori Puno120 12368313 YP_005788023.1 CDS HPPN120_01665 NC_017378.1 331867 332409 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; flagellar biosynthesis protein G 331867..332409 Helicobacter pylori Puno120 12368314 YP_005788024.1 CDS lpxK NC_017378.1 332342 333280 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(332342..333280) Helicobacter pylori Puno120 12368315 YP_005788025.1 CDS HPPN120_01675 NC_017378.1 333277 334059 R COG0171 NAD synthase; NAD synthetase complement(333277..334059) Helicobacter pylori Puno120 12368316 YP_005788026.1 CDS HPPN120_01680 NC_017378.1 334306 335298 D COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 334306..335298 Helicobacter pylori Puno120 12368318 YP_005788027.1 CDS HPPN120_01685 NC_017378.1 335322 336128 D COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor (minD) 335322..336128 Helicobacter pylori Puno120 12368319 YP_005788028.1 CDS minE NC_017378.1 336125 336358 D COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 336125..336358 Helicobacter pylori Puno120 12368320 YP_005788029.1 CDS HPPN120_01695 NC_017378.1 336370 337170 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing protein DprA 336370..337170 Helicobacter pylori Puno120 12368321 YP_005788030.1 CDS HPPN120_01700 NC_017378.1 337167 337571 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 337167..337571 Helicobacter pylori Puno120 12368322 YP_005788031.1 CDS HPPN120_01705 NC_017378.1 337630 337722 D hypothetical protein 337630..337722 Helicobacter pylori Puno120 12368323 YP_005788032.1 CDS HPPN120_01710 NC_017378.1 337703 338278 D COG0790 FOG: TPR repeat, SEL1 subfamily; cysteine-rich protein H 337703..338278 Helicobacter pylori Puno120 12368324 YP_005788033.1 CDS HPPN120_01715 NC_017378.1 338472 338810 D hypothetical protein 338472..338810 Helicobacter pylori Puno120 12368325 YP_005788034.1 CDS HPPN120_01720 NC_017378.1 338794 339354 D hypothetical protein 338794..339354 Helicobacter pylori Puno120 12368326 YP_005788035.1 CDS HPPN120_01735 NC_017378.1 340055 340174 D hypothetical protein 340055..340174 Helicobacter pylori Puno120 12368327 YP_005788036.1 CDS HPPN120_01740 NC_017378.1 340344 340718 D COG3326 Predicted membrane protein; hypothetical protein 340344..340718 Helicobacter pylori Puno120 12368328 YP_005788037.1 CDS HPPN120_01745 NC_017378.1 340734 341519 D hypothetical protein 340734..341519 Helicobacter pylori Puno120 12368329 YP_005788038.1 CDS HPPN120_01750 NC_017378.1 341509 342603 D hypothetical protein 341509..342603 Helicobacter pylori Puno120 12368330 YP_005788039.1 CDS HPPN120_01755 NC_017378.1 342659 343540 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(342659..343540) Helicobacter pylori Puno120 12368331 YP_005788040.1 CDS HPPN120_01760 NC_017378.1 343540 345090 R COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease complement(343540..345090) Helicobacter pylori Puno120 12368332 YP_005788041.1 CDS pyrG NC_017378.1 345099 346715 R COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase complement(345099..346715) Helicobacter pylori Puno120 12368333 YP_005788042.1 CDS HPPN120_01770 NC_017378.1 346971 347633 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 346971..347633 Helicobacter pylori Puno120 12368334 YP_005788043.1 CDS fliF NC_017378.1 347677 349380 D COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 347677..349380 Helicobacter pylori Puno120 12368335 YP_005788044.1 CDS fliG NC_017378.1 349399 350430 D COG1536 Flagellar motor switch protein; flagellar motor switch protein G 349399..350430 Helicobacter pylori Puno120 12368336 YP_005788045.1 CDS fliH NC_017378.1 350417 351193 D COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 350417..351193 Helicobacter pylori Puno120 12368337 YP_005788046.1 CDS HPPN120_01790 NC_017378.1 351196 353046 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 351196..353046 Helicobacter pylori Puno120 12368338 YP_005788047.1 CDS HPPN120_01795 NC_017378.1 353061 354851 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 353061..354851 Helicobacter pylori Puno120 12368339 YP_005788048.1 CDS HPPN120_01800 NC_017378.1 354866 355624 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein 354866..355624 Helicobacter pylori Puno120 12368340 YP_005788049.1 CDS HPPN120_01805 NC_017378.1 355986 356795 R COG4786 Flagellar basal body rod protein; flagellar basal-body rod protein complement(355986..356795) Helicobacter pylori Puno120 12368341 YP_005788050.1 CDS HPPN120_01810 NC_017378.1 356851 358137 R COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate permease complement(356851..358137) Helicobacter pylori Puno120 12368342 YP_005788051.1 CDS HPPN120_01815 NC_017378.1 358300 360822 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein complement(358300..360822) Helicobacter pylori Puno120 12368343 YP_005788052.1 CDS HPPN120_01830 NC_017378.1 363151 365076 R COG0021 Transketolase; transketolase complement(363151..365076) Helicobacter pylori Puno120 12368344 YP_005788053.1 CDS HPPN120_01835 NC_017378.1 365123 365965 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(365123..365965) Helicobacter pylori Puno120 12368345 YP_005788054.1 CDS HPPN120_01840 NC_017378.1 365931 366638 R COG1189 Predicted rRNA methylase; hemolysin complement(365931..366638) Helicobacter pylori Puno120 12368346 YP_005788055.1 CDS HPPN120_01845 NC_017378.1 366638 367153 R hypothetical protein complement(366638..367153) Helicobacter pylori Puno120 12368347 YP_005788056.1 CDS pyrB NC_017378.1 367220 368143 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 367220..368143 Helicobacter pylori Puno120 12368348 YP_005788057.1 CDS HPPN120_01855 NC_017378.1 368438 369877 D hypothetical protein 368438..369877 Helicobacter pylori Puno120 12368349 YP_005788058.1 CDS HPPN120_01860 NC_017378.1 369970 371625 D COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug resistance protein (msbA) 369970..371625 Helicobacter pylori Puno120 12368350 YP_005788059.1 CDS HPPN120_01875 NC_017378.1 372245 372823 D Mrr protein; COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes; archaeal Holliday junction resolvase-like protein 372245..372823 Helicobacter pylori Puno120 12368351 YP_005788060.1 CDS HPPN120_01880 NC_017378.1 372937 373932 D COG3376 High-affinity nickel permease; high-affinity nickel-transport protein 372937..373932 Helicobacter pylori Puno120 12368352 YP_005788061.1 CDS HPPN120_01885 NC_017378.1 373936 374451 R hypothetical protein complement(373936..374451) Helicobacter pylori Puno120 12368353 YP_005788062.1 CDS HPPN120_01890 NC_017378.1 374584 375900 D hypothetical protein 374584..375900 Helicobacter pylori Puno120 12368354 YP_005788063.1 CDS HPPN120_01895 NC_017378.1 376550 376750 R COG2608 Copper chaperone; COP-associated protein complement(376550..376750) Helicobacter pylori Puno120 12368355 YP_005788064.1 CDS HPPN120_01900 NC_017378.1 376751 378976 R COG2217 Cation transport ATPase; copper-transporting ATPase complement(376751..378976) Helicobacter pylori Puno120 12368356 YP_005788065.1 CDS HPPN120_01905 NC_017378.1 378973 379686 R COG1183 Phosphatidylserine synthase; phosphatidylserine synthase complement(378973..379686) Helicobacter pylori Puno120 12368357 YP_005788066.1 CDS HPPN120_01910 NC_017378.1 379676 379900 R hypothetical protein complement(379676..379900) Helicobacter pylori Puno120 12368358 YP_005788067.1 CDS HPPN120_01915 NC_017378.1 379903 381801 R COG0465 ATP-dependent Zn proteases; cell division protein (ftsH) complement(379903..381801) Helicobacter pylori Puno120 12368359 YP_005788068.1 CDS prmA NC_017378.1 381810 382799 R COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase complement(381810..382799) Helicobacter pylori Puno120 12368360 YP_005788069.1 CDS HPPN120_01925 NC_017378.1 382800 383174 R COG0784 FOG: CheY-like receiver; response regulator complement(382800..383174) Helicobacter pylori Puno120 12368361 YP_005788070.1 CDS HPPN120_01930 NC_017378.1 383465 384067 D outer membrane protein HorD 383465..384067 Helicobacter pylori Puno120 12368362 YP_005788071.1 CDS HPPN120_01935 NC_017378.1 384199 384606 R hypothetical protein complement(384199..384606) Helicobacter pylori Puno120 12368364 YP_005788072.1 CDS HPPN120_01940 NC_017378.1 384609 384839 R hypothetical protein complement(384609..384839) Helicobacter pylori Puno120 12368365 YP_005788073.1 CDS gidB NC_017378.1 384833 385369 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(384833..385369) Helicobacter pylori Puno120 12368366 YP_005788074.1 CDS queA NC_017378.1 385366 386403 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(385366..386403) Helicobacter pylori Puno120 12368367 YP_005788075.1 CDS HPPN120_01955 NC_017378.1 386404 387165 R COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase protein tatC-like protein complement(386404..387165) Helicobacter pylori Puno120 12368368 YP_005788076.1 CDS HPPN120_01960 NC_017378.1 387158 387640 R COG1826 Sec-independent protein secretion pathway components; sec-independent translocase complement(387158..387640) Helicobacter pylori Puno120 12368369 YP_005788077.1 CDS ruvB NC_017378.1 387708 388718 R COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB complement(387708..388718) Helicobacter pylori Puno120 12368370 YP_005788078.1 CDS panB NC_017378.1 388719 389531 R COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(388719..389531) Helicobacter pylori Puno120 12368371 YP_005788079.1 CDS HPPN120_01975 NC_017378.1 389679 390401 D hypothetical protein 389679..390401 Helicobacter pylori Puno120 12368372 YP_005788080.1 CDS HPPN120_01980 NC_017378.1 390391 391245 D hypothetical protein 390391..391245 Helicobacter pylori Puno120 12368373 YP_005788081.1 CDS HPPN120_01985 NC_017378.1 391257 392198 D hypothetical protein 391257..392198 Helicobacter pylori Puno120 12368374 YP_005788082.1 CDS HPPN120_01990 NC_017378.1 392208 393530 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 392208..393530 Helicobacter pylori Puno120 12368375 YP_005788083.1 CDS minC NC_017378.1 393533 394120 D COG0850 Septum formation inhibitor; septum formation inhibitor 393533..394120 Helicobacter pylori Puno120 12368376 YP_005788084.1 CDS lpxC NC_017378.1 394117 395004 D COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 394117..395004 Helicobacter pylori Puno120 12368377 YP_005788085.1 CDS HPPN120_02005 NC_017378.1 395026 395499 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 395026..395499 Helicobacter pylori Puno120 12368378 YP_005788086.1 CDS HPPN120_02010 NC_017378.1 395553 396434 D COG0083 Homoserine kinase; homoserine kinase 395553..396434 Helicobacter pylori Puno120 12368379 YP_005788087.1 CDS HPPN120_02015 NC_017378.1 396421 396675 D COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 396421..396675 Helicobacter pylori Puno120 12368380 YP_005788088.1 CDS rbfA NC_017378.1 399525 399860 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 399525..399860 Helicobacter pylori Puno120 12368381 YP_005788089.1 CDS HPPN120_02035 NC_017378.1 399853 400293 D COG0779 Uncharacterized protein conserved in bacteria; Ribosome maturation factor rimP 399853..400293 Helicobacter pylori Puno120 12368382 YP_005788090.1 CDS HPPN120_02050 NC_017378.1 402585 403697 D COG1408 Predicted phosphohydrolases; hypothetical protein 402585..403697 Helicobacter pylori Puno120 12368383 YP_005788091.1 CDS HPPN120_02055 NC_017378.1 404022 404693 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 404022..404693 Helicobacter pylori Puno120 12368384 YP_005788092.1 CDS HPPN120_02060 NC_017378.1 405029 406072 R COG2404 Predicted phosphohydrolase (DHH superfamily); hypothetical protein complement(405029..406072) Helicobacter pylori Puno120 12368385 YP_005788093.1 CDS flhA NC_017378.1 406103 408304 R COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA complement(406103..408304) Helicobacter pylori Puno120 12368386 YP_005788094.1 CDS rpsO NC_017378.1 408443 408715 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 408443..408715 Helicobacter pylori Puno120 12368387 YP_005788095.1 CDS HPPN120_02075 NC_017378.1 408745 410034 D COG3307 Lipid A core - O-antigen ligase and related enzymes; hypothetical protein 408745..410034 Helicobacter pylori Puno120 12368388 YP_005788096.1 CDS HPPN120_02080 NC_017378.1 410163 410666 D COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 410163..410666 Helicobacter pylori Puno120 12368389 YP_005788097.1 CDS HPPN120_02085 NC_017378.1 410679 411752 D COG0006 Xaa-Pro aminopeptidase; X-Pro aminopeptidase 410679..411752 Helicobacter pylori Puno120 12368390 YP_005788098.1 CDS HPPN120_02090 NC_017378.1 411749 412240 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 411749..412240 Helicobacter pylori Puno120 12368391 YP_005788099.1 CDS flhF NC_017378.1 412237 413613 D COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF 412237..413613 Helicobacter pylori Puno120 12368392 YP_005788100.1 CDS HPPN120_02100 NC_017378.1 413610 414494 D COG0455 ATPases involved in chromosome partitioning; ATP-binding protein (ylxH) 413610..414494 Helicobacter pylori Puno120 12368393 YP_005788101.1 CDS HPPN120_02105 NC_017378.1 414499 414813 D hypothetical protein 414499..414813 Helicobacter pylori Puno120 12368394 YP_005788102.1 CDS fliA NC_017378.1 414791 415567 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 414791..415567 Helicobacter pylori Puno120 12368395 YP_005788103.1 CDS fliM NC_017378.1 415560 416624 D COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 415560..416624 Helicobacter pylori Puno120 12368396 YP_005788104.1 CDS HPPN120_02120 NC_017378.1 416628 417500 D COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliY 416628..417500 Helicobacter pylori Puno120 12368397 YP_005788105.1 CDS HPPN120_02125 NC_017378.1 417529 418065 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 417529..418065 Helicobacter pylori Puno120 12368398 YP_005788106.1 CDS HPPN120_02130 NC_017378.1 418062 418559 D COG4731 Uncharacterized protein conserved in bacteria; hypothetical protein 418062..418559 Helicobacter pylori Puno120 12368399 YP_005788107.1 CDS HPPN120_02135 NC_017378.1 418579 419031 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein complement(418579..419031) Helicobacter pylori Puno120 12368400 YP_005788108.1 CDS HPPN120_02140 NC_017378.1 419191 420366 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(419191..420366) Helicobacter pylori Puno120 12368401 YP_005788109.1 CDS HPPN120_02145 NC_017378.1 420363 420734 R COG0789 Predicted transcriptional regulators; putative heat shock protein (hspR) complement(420363..420734) Helicobacter pylori Puno120 12368402 YP_005788110.1 CDS HPPN120_02150 NC_017378.1 420744 421610 R COG2214 DnaJ-class molecular chaperone; co-chaperone-curved DNA binding protein A complement(420744..421610) Helicobacter pylori Puno120 12368403 YP_005788111.1 CDS HPPN120_02155 NC_017378.1 421778 423028 D hypothetical protein 421778..423028 Helicobacter pylori Puno120 12368404 YP_005788112.1 CDS HPPN120_02160 NC_017378.1 423050 423826 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); 5'-3' exonuclease complement(423050..423826) Helicobacter pylori Puno120 12368405 YP_005788113.1 CDS HPPN120_02165 NC_017378.1 424113 425009 R COG0784 FOG: CheY-like receiver; response regulator complement(424113..425009) Helicobacter pylori Puno120 12368406 YP_005788114.1 CDS ispDF NC_017378.1 425041 426261 R COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(425041..426261) Helicobacter pylori Puno120 12368407 YP_005788115.1 CDS HPPN120_02175 NC_017378.1 426283 427713 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; protease DO complement(426283..427713) Helicobacter pylori Puno120 12368408 YP_005788116.1 CDS HPPN120_02180 NC_017378.1 427757 429199 R COG0833 Amino acid transporters; amino acid permease complement(427757..429199) Helicobacter pylori Puno120 12368409 YP_005788117.1 CDS HPPN120_02185 NC_017378.1 429393 429932 R COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase complement(429393..429932) Helicobacter pylori Puno120 12368410 YP_005788118.1 CDS HPPN120_02190 NC_017378.1 429929 430537 R hypothetical protein complement(429929..430537) Helicobacter pylori Puno120 12368411 YP_005788119.1 CDS HPPN120_02195 NC_017378.1 430514 430621 D hypothetical protein 430514..430621 Helicobacter pylori Puno120 12368412 YP_005788120.1 CDS HPPN120_02200 NC_017378.1 430547 431335 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase complement(430547..431335) Helicobacter pylori Puno120 12368413 YP_005788121.1 CDS HPPN120_02205 NC_017378.1 431332 432234 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(431332..432234) Helicobacter pylori Puno120 12368414 YP_005788122.1 CDS HPPN120_02210 NC_017378.1 432249 433583 R COG0612 Predicted Zn-dependent peptidases; putative zinc protease complement(432249..433583) Helicobacter pylori Puno120 12368415 YP_005788123.1 CDS HPPN120_02215 NC_017378.1 433580 434635 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(433580..434635) Helicobacter pylori Puno120 12368416 YP_005788124.1 CDS HPPN120_02220 NC_017378.1 434674 436701 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(434674..436701) Helicobacter pylori Puno120 12368417 YP_005788125.1 CDS HPPN120_02225 NC_017378.1 436853 436963 R hypothetical protein complement(436853..436963) Helicobacter pylori Puno120 12368419 YP_005788126.1 CDS HPPN120_02230 NC_017378.1 437366 437911 R COG0732 Restriction endonuclease S subunits; hypothetical protein complement(437366..437911) Helicobacter pylori Puno120 12368420 YP_005788127.1 CDS HPPN120_02235 NC_017378.1 437922 438539 R COG0732 Restriction endonuclease S subunits; Type I restriction/modification specificity protein complement(437922..438539) Helicobacter pylori Puno120 12368421 YP_005788128.1 CDS HPPN120_02240 NC_017378.1 438532 440163 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(438532..440163) Helicobacter pylori Puno120 12368422 YP_005788129.1 CDS HPPN120_02245 NC_017378.1 440156 443272 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(440156..443272) Helicobacter pylori Puno120 12368423 YP_005788130.1 CDS HPPN120_02250 NC_017378.1 443320 445215 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(443320..445215) Helicobacter pylori Puno120 12368424 YP_005788131.1 CDS HPPN120_02255 NC_017378.1 445241 446008 R hypothetical protein complement(445241..446008) Helicobacter pylori Puno120 12368425 YP_005788132.1 CDS HPPN120_02260 NC_017378.1 446018 446332 R hypothetical protein complement(446018..446332) Helicobacter pylori Puno120 12368426 YP_005788133.1 CDS HPPN120_02265 NC_017378.1 446334 447821 R COG2048 Heterodisulfide reductase, subunit B; hypothetical protein complement(446334..447821) Helicobacter pylori Puno120 12368427 YP_005788134.1 CDS HPPN120_02270 NC_017378.1 447833 448321 R hypothetical protein complement(447833..448321) Helicobacter pylori Puno120 12368428 YP_005788135.1 CDS HPPN120_02275 NC_017378.1 448306 450042 R COG1164 Oligoendopeptidase F; oligoendopeptidase F complement(448306..450042) Helicobacter pylori Puno120 12368429 YP_005788136.1 CDS HPPN120_02280 NC_017378.1 450139 451389 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein (kefB) complement(450139..451389) Helicobacter pylori Puno120 12368430 YP_005788137.1 CDS HPPN120_02285 NC_017378.1 451705 452265 R hypothetical protein complement(451705..452265) Helicobacter pylori Puno120 12368431 YP_005788138.1 CDS HPPN120_02290 NC_017378.1 452488 453228 D COG0725 ABC-type molybdate transport system, periplasmic component; molybdenum ABC transporter ModA 452488..453228 Helicobacter pylori Puno120 12368432 YP_005788139.1 CDS HPPN120_02295 NC_017378.1 453250 453924 D COG4149 ABC-type molybdate transport system, permease component; molybdenum ABC transporter ModB 453250..453924 Helicobacter pylori Puno120 12368433 YP_005788140.1 CDS HPPN120_02300 NC_017378.1 453921 454718 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; molybdenum ABC transporter ModD 453921..454718 Helicobacter pylori Puno120 12368434 YP_005788141.1 CDS gltX NC_017378.1 454802 456193 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(454802..456193) Helicobacter pylori Puno120 12368435 YP_005788142.1 CDS HPPN120_02310 NC_017378.1 456311 457408 D outer membrane protein (omp22) 456311..457408 Helicobacter pylori Puno120 12368436 YP_005788143.1 CDS HPPN120_02315 NC_017378.1 459019 459867 D COG0859 ADP-heptose:LPS heptosyltransferase; type II adenine specific methyltransferase 459019..459867 Helicobacter pylori Puno120 12368437 YP_005788144.1 CDS HPPN120_02320 NC_017378.1 459913 461712 D COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein TypA 459913..461712 Helicobacter pylori Puno120 12368438 YP_005788145.1 CDS HPPN120_02325 NC_017378.1 461728 462657 D COG0338 Site-specific DNA methylase; type II adenine specific DNA methyltransferase 461728..462657 Helicobacter pylori Puno120 12368439 YP_005788146.1 CDS HPPN120_02330 NC_017378.1 462660 463283 D type II restriction endonuclease 462660..463283 Helicobacter pylori Puno120 12368440 YP_005788147.1 CDS HPPN120_02335 NC_017378.1 463374 464429 D COG0270 Site-specific DNA methylase; type II DNA modification enzyme (methyltransferase) 463374..464429 Helicobacter pylori Puno120 12368441 YP_005788148.1 CDS HPPN120_02340 NC_017378.1 464422 465162 D hypothetical protein 464422..465162 Helicobacter pylori Puno120 12368442 YP_005788149.1 CDS HPPN120_02345 NC_017378.1 465407 466351 R COG0753 Catalase; catalase-like protein complement(465407..466351) Helicobacter pylori Puno120 12368443 YP_005788150.1 CDS HPPN120_02350 NC_017378.1 466637 468223 D outer membrane protein HofC 466637..468223 Helicobacter pylori Puno120 12368444 YP_005788151.1 CDS HPPN120_02355 NC_017378.1 468293 469690 D hypothetical protein 468293..469690 Helicobacter pylori Puno120 12368445 YP_005788152.1 CDS HPPN120_02360 NC_017378.1 470077 472296 D hypothetical protein 470077..472296 Helicobacter pylori Puno120 12368446 YP_005788153.1 CDS HPPN120_02365 NC_017378.1 472300 472827 D hypothetical protein 472300..472827 Helicobacter pylori Puno120 12368447 YP_005788154.1 CDS HPPN120_02370 NC_017378.1 472870 473250 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; hypothetical protein 472870..473250 Helicobacter pylori Puno120 12368448 YP_005788155.1 CDS HPPN120_02375 NC_017378.1 473266 474402 R COG1226 Kef-type K+ transport systems, predicted NAD-binding component; putative potassium channel protein complement(473266..474402) Helicobacter pylori Puno120 12368449 YP_005788156.1 CDS rpmB NC_017378.1 474552 474740 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(474552..474740) Helicobacter pylori Puno120 12368450 YP_005788157.1 CDS HPPN120_02385 NC_017378.1 474833 475681 R hypothetical protein complement(474833..475681) Helicobacter pylori Puno120 12368451 YP_005788158.1 CDS mraY NC_017378.1 475807 476868 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 475807..476868 Helicobacter pylori Puno120 12368452 YP_005788159.1 CDS HPPN120_02405 NC_017378.1 478133 478393 R hypothetical protein complement(478133..478393) Helicobacter pylori Puno120 12368453 YP_005788160.1 CDS HPPN120_02410 NC_017378.1 478383 478784 R COG0824 Predicted thioesterase; hypothetical protein complement(478383..478784) Helicobacter pylori Puno120 12368454 YP_005788161.1 CDS HPPN120_02415 NC_017378.1 479012 480340 D COG0733 Na+-dependent transporters of the SNF family; sodium-and chloride-dependent transporter; membrane protein 479012..480340 Helicobacter pylori Puno120 12368455 YP_005788162.1 CDS HPPN120_02420 NC_017378.1 480351 481679 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 480351..481679 Helicobacter pylori Puno120 12368456 YP_005788163.1 CDS HPPN120_02425 NC_017378.1 481694 482761 D COG2829 Outer membrane phospholipase A; phospholipase A1 481694..482761 Helicobacter pylori Puno120 12368457 YP_005788164.1 CDS HPPN120_02430 NC_017378.1 482819 483943 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 482819..483943 Helicobacter pylori Puno120 12368458 YP_005788165.1 CDS gyrB NC_017378.1 483959 486280 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 483959..486280 Helicobacter pylori Puno120 12368459 YP_005788166.1 CDS HPPN120_02440 NC_017378.1 486375 486779 R hypothetical protein complement(486375..486779) Helicobacter pylori Puno120 12368460 YP_005788167.1 CDS HPPN120_02445 NC_017378.1 487246 488454 D COG0739 Membrane proteins related to metalloendopeptidases; putative outer membrane protein 487246..488454 Helicobacter pylori Puno120 12368461 YP_005788168.1 CDS HPPN120_02450 NC_017378.1 488454 489092 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 488454..489092 Helicobacter pylori Puno120 12368462 YP_005788169.1 CDS HPPN120_02455 NC_017378.1 489103 490410 D plasminogen binding protein 489103..490410 Helicobacter pylori Puno120 12368463 YP_005788170.1 CDS HPPN120_02460 NC_017378.1 490412 491791 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit 490412..491791 Helicobacter pylori Puno120 12368464 YP_005788171.1 CDS HPPN120_02465 NC_017378.1 491814 492578 D COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 491814..492578 Helicobacter pylori Puno120 12368465 YP_005788172.1 CDS HPPN120_02470 NC_017378.1 492906 493076 D urease-enhancing factor 492906..493076 Helicobacter pylori Puno120 12368466 YP_005788173.1 CDS HPPN120_02475 NC_017378.1 493091 493237 D hypothetical protein 493091..493237 Helicobacter pylori Puno120 12368467 YP_005788174.1 CDS HPPN120_02480 NC_017378.1 493300 494745 R COG0174 Glutamine synthetase; glutamine synthetase complement(493300..494745) Helicobacter pylori Puno120 12368468 YP_005788175.1 CDS HPPN120_02485 NC_017378.1 494879 496912 D COG1479 Uncharacterized conserved protein; hypothetical protein 494879..496912 Helicobacter pylori Puno120 12368469 YP_005788176.1 CDS rplI NC_017378.1 496975 497424 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 496975..497424 Helicobacter pylori Puno120 12368470 YP_005788177.1 CDS HPPN120_02495 NC_017378.1 497428 497970 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 497428..497970 Helicobacter pylori Puno120 12368471 YP_005788178.1 CDS hslU NC_017378.1 497979 499301 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 497979..499301 Helicobacter pylori Puno120 12368472 YP_005788179.1 CDS era NC_017378.1 499301 500206 D COG1159 GTPase; GTPase Era 499301..500206 Helicobacter pylori Puno120 12368473 YP_005788180.1 CDS HPPN120_02510 NC_017378.1 500203 501195 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 500203..501195 Helicobacter pylori Puno120 12368474 YP_005788181.1 CDS HPPN120_02515 NC_017378.1 501264 502049 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(501264..502049) Helicobacter pylori Puno120 12368475 YP_005788182.1 CDS HPPN120_02520 NC_017378.1 502024 502116 R hypothetical protein complement(502024..502116) Helicobacter pylori Puno120 12368476 YP_005788183.1 CDS HPPN120_02525 NC_017378.1 502230 502577 D cag pathogenicity island protein (cag zeta, cag1) 502230..502577 Helicobacter pylori Puno120 12368477 YP_005788184.1 CDS HPPN120_02530 NC_017378.1 502806 504251 D cag pathogenicity island protein (cag delta, cag3) 502806..504251 Helicobacter pylori Puno120 12368478 YP_005788185.1 CDS HPPN120_02535 NC_017378.1 504261 504770 D cag pathogenicity island protein (cag4) 504261..504770 Helicobacter pylori Puno120 12368479 YP_005788186.1 CDS HPPN120_02550 NC_017378.1 507143 508135 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; cag pathogenicity island protein cag alpha complement(507143..508135) Helicobacter pylori Puno120 12368480 YP_005788187.1 CDS HPPN120_02555 NC_017378.1 508140 508739 R cag pathogenicity island protein (cagZ, cag6) complement(508140..508739) Helicobacter pylori Puno120 12368481 YP_005788188.1 CDS HPPN120_02560 NC_017378.1 508752 508886 R hypothetical protein complement(508752..508886) Helicobacter pylori Puno120 12368482 YP_005788189.1 CDS HPPN120_02565 NC_017378.1 508876 514551 R COG2948 Type IV secretory pathway, VirB10 components; cag pathogenicity island protein (cag7) complement(508876..514551) Helicobacter pylori Puno120 12368483 YP_005788190.1 CDS HPPN120_02570 NC_017378.1 514566 516134 R COG3504 Type IV secretory pathway, VirB9 components; cag pathogenicity island protein (cagX, cag8) complement(514566..516134) Helicobacter pylori Puno120 12368484 YP_005788191.1 CDS HPPN120_02575 NC_017378.1 516187 517794 R cag pathogenicity island protein W complement(516187..517794) Helicobacter pylori Puno120 12368485 YP_005788192.1 CDS HPPN120_02580 NC_017378.1 517799 518557 R COG3736 Type IV secretory pathway, component VirB8; cag pathogenicity island protein (cagV, cag10) complement(517799..518557) Helicobacter pylori Puno120 12368486 YP_005788193.1 CDS HPPN120_02585 NC_017378.1 518831 519478 D cag pathogenicity island protein (cagU, cag11) 518831..519478 Helicobacter pylori Puno120 12368487 YP_005788194.1 CDS HPPN120_02590 NC_017378.1 519494 520336 D CAG pathogenicity island protein T 519494..520336 Helicobacter pylori Puno120 12368488 YP_005788195.1 CDS HPPN120_02595 NC_017378.1 520538 521137 R CAG pathogenicity island protein S complement(520538..521137) Helicobacter pylori Puno120 12368489 YP_005788196.1 CDS HPPN120_02600 NC_017378.1 521471 521683 R hypothetical protein complement(521471..521683) Helicobacter pylori Puno120 12368490 YP_005788197.1 CDS HPPN120_02605 NC_017378.1 521742 521936 D hypothetical protein 521742..521936 Helicobacter pylori Puno120 12368491 YP_005788198.1 CDS HPPN120_02610 NC_017378.1 521948 522253 D cag pathogenicity island protein (cagQ, cag14) 521948..522253 Helicobacter pylori Puno120 12368492 YP_005788199.1 CDS HPPN120_02615 NC_017378.1 522310 522513 D hypothetical protein 522310..522513 Helicobacter pylori Puno120 12368493 YP_005788200.1 CDS HPPN120_02620 NC_017378.1 524094 525224 D cag pathogenicity island protein M 524094..525224 Helicobacter pylori Puno120 12368494 YP_005788201.1 CDS HPPN120_02625 NC_017378.1 525239 526150 D cag pathogenicity island protein (cagN, cag17) 525239..526150 Helicobacter pylori Puno120 12368495 YP_005788202.1 CDS HPPN120_02630 NC_017378.1 526233 526940 R cag pathogenicity island protein (cagL, cag18) complement(526233..526940) Helicobacter pylori Puno120 12368496 YP_005788203.1 CDS HPPN120_02635 NC_017378.1 526937 528076 R cag pathogenicity island protein (cagI, cag19) complement(526937..528076) Helicobacter pylori Puno120 12368497 YP_005788204.1 CDS HPPN120_02640 NC_017378.1 528087 529199 R COG0249 Mismatch repair ATPase (MutS family); cag pathogenicity island protein H complement(528087..529199) Helicobacter pylori Puno120 12368498 YP_005788205.1 CDS HPPN120_02645 NC_017378.1 529201 529632 R cag pathogenicity island protein (cagG, cag21) complement(529201..529632) Helicobacter pylori Puno120 12368499 YP_005788206.1 CDS HPPN120_02650 NC_017378.1 529687 530493 R cag pathogenicity island protein (cagF, cag22) complement(529687..530493) Helicobacter pylori Puno120 12368500 YP_005788207.1 CDS HPPN120_02665 NC_017378.1 533456 534079 R cag pathogenicity island protein (cagD, cag24) complement(533456..534079) Helicobacter pylori Puno120 12368501 YP_005788208.1 CDS HPPN120_02670 NC_017378.1 534081 534428 R cag pathogenicity island protein (cagC, cag25) complement(534081..534428) Helicobacter pylori Puno120 12368502 YP_005788209.1 CDS HPPN120_02675 NC_017378.1 534607 534834 R cag pathogenicity island protein (cagB) complement(534607..534834) Helicobacter pylori Puno120 12368503 YP_005788210.1 CDS HPPN120_02680 NC_017378.1 535240 538758 D cag pathogenicity island protein (cagA, cag26) 535240..538758 Helicobacter pylori Puno120 12368504 YP_005788211.1 CDS HPPN120_02685 NC_017378.1 538939 539211 D COG2345 Predicted transcriptional regulator; hypothetical protein 538939..539211 Helicobacter pylori Puno120 12368505 YP_005788212.1 CDS HPPN120_02690 NC_017378.1 539151 539918 R COG0796 Glutamate racemase; glutamate racemase complement(539151..539918) Helicobacter pylori Puno120 12368506 YP_005788213.1 CDS rho NC_017378.1 539955 541271 R COG1158 Transcription termination factor; transcription termination factor Rho complement(539955..541271) Helicobacter pylori Puno120 12368507 YP_005788214.1 CDS rpmE NC_017378.1 541530 541733 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 541530..541733 Helicobacter pylori Puno120 12368508 YP_005788215.1 CDS HPPN120_02705 NC_017378.1 541758 542621 D COG0313 Predicted methyltransferases; hypothetical protein 541758..542621 Helicobacter pylori Puno120 12368509 YP_005788216.1 CDS HPPN120_02710 NC_017378.1 542634 543317 D COG0566 rRNA methylases; RNA methyltransferase 542634..543317 Helicobacter pylori Puno120 12368510 YP_005788217.1 CDS HPPN120_02715 NC_017378.1 543330 544304 D hypothetical protein 543330..544304 Helicobacter pylori Puno120 12368511 YP_005788218.1 CDS HPPN120_02720 NC_017378.1 544301 545122 D COG1217 Predicted membrane GTPase involved in stress response; hypothetical protein 544301..545122 Helicobacter pylori Puno120 12368512 YP_005788219.1 CDS HPPN120_02725 NC_017378.1 545158 545373 R hypothetical protein complement(545158..545373) Helicobacter pylori Puno120 12368513 YP_005788220.1 CDS HPPN120_02730 NC_017378.1 545485 545598 D hypothetical protein 545485..545598 Helicobacter pylori Puno120 12368514 YP_005788221.1 CDS HPPN120_02735 NC_017378.1 545712 546650 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(545712..546650) Helicobacter pylori Puno120 12368515 YP_005788222.1 CDS HPPN120_02740 NC_017378.1 546673 547911 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(546673..547911) Helicobacter pylori Puno120 12368516 YP_005788223.1 CDS HPPN120_02745 NC_017378.1 547927 548034 R hypothetical protein complement(547927..548034) Helicobacter pylori Puno120 12368517 YP_005788224.1 CDS acpP NC_017378.1 548225 548461 R COG0236 Acyl carrier protein; acyl carrier protein complement(548225..548461) Helicobacter pylori Puno120 12368518 YP_005788225.1 CDS fabG NC_017378.1 548692 549435 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(548692..549435) Helicobacter pylori Puno120 12368519 YP_005788226.1 CDS rpsU NC_017378.1 549472 549684 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(549472..549684) Helicobacter pylori Puno120 12368520 YP_005788227.1 CDS HPPN120_02765 NC_017378.1 549785 551035 R hypothetical protein complement(549785..551035) Helicobacter pylori Puno120 12368521 YP_005788228.1 CDS HPPN120_02770 NC_017378.1 551036 551125 D hypothetical protein 551036..551125 Helicobacter pylori Puno120 12368522 YP_005788229.1 CDS HPPN120_02775 NC_017378.1 551207 551449 D hypothetical protein 551207..551449 Helicobacter pylori Puno120 12368523 YP_005788230.1 CDS HPPN120_02780 NC_017378.1 551473 552120 R COG3059 Predicted membrane protein; hypothetical protein complement(551473..552120) Helicobacter pylori Puno120 12368524 YP_005788231.1 CDS dapF NC_017378.1 552227 553048 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(552227..553048) Helicobacter pylori Puno120 12368525 YP_005788232.1 CDS HPPN120_02790 NC_017378.1 553164 554210 D COG0628 Predicted permease; membrane protein 553164..554210 Helicobacter pylori Puno120 12368526 YP_005788233.1 CDS HPPN120_02795 NC_017378.1 554338 555105 R hypothetical protein complement(554338..555105) Helicobacter pylori Puno120 12368527 YP_005788234.1 CDS HPPN120_02800 NC_017378.1 555249 556349 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(555249..556349) Helicobacter pylori Puno120 12368528 YP_005788235.1 CDS HPPN120_02805 NC_017378.1 556351 557841 R COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A complement(556351..557841) Helicobacter pylori Puno120 12368529 YP_005788236.1 CDS HPPN120_02810 NC_017378.1 557889 558467 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(557889..558467) Helicobacter pylori Puno120 12368530 YP_005788237.1 CDS HPPN120_02815 NC_017378.1 558482 559021 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(558482..559021) Helicobacter pylori Puno120 12368531 YP_005788238.1 CDS HPPN120_02820 NC_017378.1 559079 559411 R hypothetical protein complement(559079..559411) Helicobacter pylori Puno120 12368532 YP_005788239.1 CDS HPPN120_02825 NC_017378.1 559456 559917 R COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B complement(559456..559917) Helicobacter pylori Puno120 12368533 YP_005788240.1 CDS HPPN120_02830 NC_017378.1 559938 560636 R COG1994 Zn-dependent proteases; membrane protein complement(559938..560636) Helicobacter pylori Puno120 12368534 YP_005788241.1 CDS HPPN120_02835 NC_017378.1 560645 561514 R COG0681 Signal peptidase I; signal peptidase I (lepB) complement(560645..561514) Helicobacter pylori Puno120 12368535 YP_005788242.1 CDS HPPN120_02840 NC_017378.1 561515 562387 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(561515..562387) Helicobacter pylori Puno120 12368536 YP_005788243.1 CDS HPPN120_02845 NC_017378.1 562465 564492 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; hypothetical protein complement(562465..564492) Helicobacter pylori Puno120 12368537 YP_005788244.1 CDS HPPN120_02850 NC_017378.1 564498 565049 R hypothetical protein complement(564498..565049) Helicobacter pylori Puno120 12368538 YP_005788245.1 CDS HPPN120_02855 NC_017378.1 565056 566174 R COG4692 Predicted neuraminidase (sialidase); hypothetical protein complement(565056..566174) Helicobacter pylori Puno120 12368539 YP_005788246.1 CDS HPPN120_02860 NC_017378.1 566150 567169 R COG0418 Dihydroorotase; dihydroorotase complement(566150..567169) Helicobacter pylori Puno120 12368540 YP_005788247.1 CDS HPPN120_02865 NC_017378.1 567173 568126 R COG0810 Periplasmic protein TonB, links inner and outer membranes; hypothetical protein complement(567173..568126) Helicobacter pylori Puno120 12368541 YP_005788248.1 CDS HPPN120_02870 NC_017378.1 568110 568991 R hypothetical protein complement(568110..568991) Helicobacter pylori Puno120 12368542 YP_005788249.1 CDS HPPN120_02875 NC_017378.1 568988 569359 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein complement(568988..569359) Helicobacter pylori Puno120 12368543 YP_005788250.1 CDS HPPN120_02880 NC_017378.1 569441 570091 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(569441..570091) Helicobacter pylori Puno120 12368544 YP_005788251.1 CDS HPPN120_02885 NC_017378.1 570094 570324 R COG1918 Fe2+ transport system protein A; ferrous iron transport protein A complement(570094..570324) Helicobacter pylori Puno120 12368545 YP_005788252.1 CDS HPPN120_02890 NC_017378.1 570321 573260 R hypothetical protein complement(570321..573260) Helicobacter pylori Puno120 12368546 YP_005788253.1 CDS HPPN120_02895 NC_017378.1 573241 574173 D COG1559 Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase (pabC) 573241..574173 Helicobacter pylori Puno120 12368547 YP_005788254.1 CDS oorD NC_017378.1 574349 574690 D COG1146 Ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 574349..574690 Helicobacter pylori Puno120 12368548 YP_005788255.1 CDS oorA NC_017378.1 574690 575817 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 574690..575817 Helicobacter pylori Puno120 12368549 YP_005788256.1 CDS oorB NC_017378.1 575819 576640 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 575819..576640 Helicobacter pylori Puno120 12368550 YP_005788257.1 CDS oorC NC_017378.1 576640 577194 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 576640..577194 Helicobacter pylori Puno120 12368551 YP_005788258.1 CDS HPPN120_02930 NC_017378.1 579222 579386 D hypothetical protein 579222..579386 Helicobacter pylori Puno120 12368552 YP_005788259.1 CDS HPPN120_02935 NC_017378.1 579395 580867 D COG1495 Disulfide bond formation protein DsbB; DsbB-like protein 579395..580867 Helicobacter pylori Puno120 12368553 YP_005788260.1 CDS HPPN120_02940 NC_017378.1 581065 581184 R hypothetical protein complement(581065..581184) Helicobacter pylori Puno120 12368554 YP_005788261.1 CDS HPPN120_02945 NC_017378.1 581341 581919 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; tumor necrosis factor alpha-inducing protein 581341..581919 Helicobacter pylori Puno120 12368555 YP_005788262.1 CDS HPPN120_02950 NC_017378.1 581922 583904 R PBP-1A; COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 1A complement(581922..583904) Helicobacter pylori Puno120 12368556 YP_005788263.1 CDS HPPN120_02955 NC_017378.1 583905 585026 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase complement(583905..585026) Helicobacter pylori Puno120 12368557 YP_005788264.1 CDS HPPN120_02960 NC_017378.1 585049 586350 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transmembrane sensory protein (MCP-like protein) complement(585049..586350) Helicobacter pylori Puno120 12368558 YP_005788265.1 CDS HPPN120_02965 NC_017378.1 586423 588120 R COG1132 ABC-type multidrug transport system, ATPase and permease components; putative secretion/efflux ABC transporter, ATP-binding protein complement(586423..588120) Helicobacter pylori Puno120 12368559 YP_005788266.1 CDS HPPN120_02970 NC_017378.1 588378 589910 D COG1344 Flagellin and related hook-associated proteins; flagellin A 588378..589910 Helicobacter pylori Puno120 12368560 YP_005788267.1 CDS HPPN120_02975 NC_017378.1 590028 590684 D COG2231 Uncharacterized protein related to Endonuclease III; 3-methyladenine DNA glycosylase 590028..590684 Helicobacter pylori Puno120 12368561 YP_005788268.1 CDS hemE NC_017378.1 591366 592385 D COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 591366..592385 Helicobacter pylori Puno120 12368562 YP_005788269.1 CDS HPPN120_02995 NC_017378.1 592396 593829 D COG1538 Outer membrane protein; outer-membrane protein of the hefABC efflux system HefA 592396..593829 Helicobacter pylori Puno120 12368563 YP_005788270.1 CDS HPPN120_03000 NC_017378.1 593839 594543 D COG0845 Membrane-fusion protein; membrane fusion protein of the hefABC efflux system HefB 593839..594543 Helicobacter pylori Puno120 12368564 YP_005788271.1 CDS HPPN120_03005 NC_017378.1 594556 597633 D COG0841 Cation/multidrug efflux pump; cytoplasmic pump protein of the hefABC efflux system HefC 594556..597633 Helicobacter pylori Puno120 12368565 YP_005788272.1 CDS HPPN120_03010 NC_017378.1 597630 598199 D hypothetical protein 597630..598199 Helicobacter pylori Puno120 12368566 YP_005788273.1 CDS HPPN120_03015 NC_017378.1 598351 607911 D COG0119 Isopropylmalate/homocitrate/citramalate synthases; putative vacuolating cytotoxin (VacA)-like protein 598351..607911 Helicobacter pylori Puno120 12368567 YP_005788274.1 CDS HPPN120_03020 NC_017378.1 607971 608726 R COG0842 ABC-type multidrug transport system, permease component; hypothetical protein complement(607971..608726) Helicobacter pylori Puno120 12368568 YP_005788275.1 CDS HPPN120_03025 NC_017378.1 608726 609427 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(608726..609427) Helicobacter pylori Puno120 12368569 YP_005788276.1 CDS HPPN120_03030 NC_017378.1 609586 609687 R hypothetical protein complement(609586..609687) Helicobacter pylori Puno120 12368570 YP_005788277.1 CDS HPPN120_03035 NC_017378.1 609729 610061 R hypothetical protein complement(609729..610061) Helicobacter pylori Puno120 12368571 YP_005788278.1 CDS ligA NC_017378.1 610162 612132 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(610162..612132) Helicobacter pylori Puno120 12368572 YP_005788279.1 CDS HPPN120_03045 NC_017378.1 612210 613151 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein 612210..613151 Helicobacter pylori Puno120 12368573 YP_005788280.1 CDS aspS NC_017378.1 613186 614919 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 613186..614919 Helicobacter pylori Puno120 12368574 YP_005788281.1 CDS adk NC_017378.1 614936 615511 D COG0563 Adenylate kinase and related kinases; adenylate kinase 614936..615511 Helicobacter pylori Puno120 12368575 YP_005788282.1 CDS HPPN120_03060 NC_017378.1 615536 616534 D COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 615536..616534 Helicobacter pylori Puno120 12368576 YP_005788283.1 CDS HPPN120_03065 NC_017378.1 616586 617890 D COG3306 Glycosyltransferase involved in LPS biosynthesis; family 25 glycosyl transferase 616586..617890 Helicobacter pylori Puno120 12368577 YP_005788284.1 CDS HPPN120_03070 NC_017378.1 617946 618467 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 617946..618467 Helicobacter pylori Puno120 12368578 YP_005788285.1 CDS HPPN120_03075 NC_017378.1 618616 620889 R COG1193 Mismatch repair ATPase (MutS family); recombination and DNA strand exchange inhibitor protein complement(618616..620889) Helicobacter pylori Puno120 12368579 YP_005788286.1 CDS HPPN120_03080 NC_017378.1 620886 621251 R hypothetical protein complement(620886..621251) Helicobacter pylori Puno120 12368580 YP_005788287.1 CDS murC NC_017378.1 621251 622600 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(621251..622600) Helicobacter pylori Puno120 12368581 YP_005788288.1 CDS HPPN120_03090 NC_017378.1 622593 623720 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(622593..623720) Helicobacter pylori Puno120 12368582 YP_005788289.1 CDS ispG NC_017378.1 623840 624919 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 623840..624919 Helicobacter pylori Puno120 12368583 YP_005788290.1 CDS HPPN120_03100 NC_017378.1 624922 626127 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 624922..626127 Helicobacter pylori Puno120 12368584 YP_005788291.1 CDS HPPN120_03105 NC_017378.1 626139 627197 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 626139..627197 Helicobacter pylori Puno120 12368585 YP_005788292.1 CDS HPPN120_03110 NC_017378.1 627317 629365 D COG1479 Uncharacterized conserved protein; hypothetical protein 627317..629365 Helicobacter pylori Puno120 12368586 YP_005788293.1 CDS HPPN120_03115 NC_017378.1 629415 629999 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); modulator of drug activity B complement(629415..629999) Helicobacter pylori Puno120 12368587 YP_005788294.1 CDS HPPN120_03120 NC_017378.1 630124 631278 D COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase (NiFe) small subunit HydA 630124..631278 Helicobacter pylori Puno120 12368588 YP_005788295.1 CDS HPPN120_03125 NC_017378.1 631288 633024 D COG0374 Ni,Fe-hydrogenase I large subunit; nickel-dependent hydrogenase, large subunit 631288..633024 Helicobacter pylori Puno120 12368589 YP_005788296.1 CDS HPPN120_03130 NC_017378.1 633037 633711 D COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 633037..633711 Helicobacter pylori Puno120 12368590 YP_005788297.1 CDS HPPN120_03135 NC_017378.1 633708 634244 D COG0680 Ni,Fe-hydrogenase maturation factor; Hydrogenase expression/formation protein 633708..634244 Helicobacter pylori Puno120 12368591 YP_005788298.1 CDS HPPN120_03140 NC_017378.1 634246 635784 D hypothetical protein 634246..635784 Helicobacter pylori Puno120 12368592 YP_005788299.1 CDS HPPN120_03145 NC_017378.1 635789 636202 R hypothetical protein complement(635789..636202) Helicobacter pylori Puno120 12368593 YP_005788300.1 CDS HPPN120_03150 NC_017378.1 636327 636779 R hypothetical protein complement(636327..636779) Helicobacter pylori Puno120 12368594 YP_005788301.1 CDS HPPN120_03155 NC_017378.1 636958 637698 D outer membrane protein HopH 636958..637698 Helicobacter pylori Puno120 12368595 YP_005788302.1 CDS HPPN120_03160 NC_017378.1 637815 639035 R COG1896 Predicted hydrolases of HD superfamily; hypothetical protein complement(637815..639035) Helicobacter pylori Puno120 12368596 YP_005788303.1 CDS HPPN120_03165 NC_017378.1 639021 639113 D hypothetical protein 639021..639113 Helicobacter pylori Puno120 12368597 YP_005788304.1 CDS HPPN120_03170 NC_017378.1 639479 640381 R COG1912 Uncharacterized conserved protein; hypothetical protein complement(639479..640381) Helicobacter pylori Puno120 12368598 YP_005788305.1 CDS HPPN120_03175 NC_017378.1 640626 640970 R hypothetical protein complement(640626..640970) Helicobacter pylori Puno120 12368599 YP_005788306.1 CDS HPPN120_03180 NC_017378.1 640990 641916 R COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltranserfase complement(640990..641916) Helicobacter pylori Puno120 12368600 YP_005788307.1 CDS HPPN120_03185 NC_017378.1 642094 642915 R outer membrane protein HopE complement(642094..642915) Helicobacter pylori Puno120 12368601 YP_005788308.1 CDS uvrA NC_017378.1 643090 645915 D COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 643090..645915 Helicobacter pylori Puno120 12368602 YP_005788309.1 CDS HPPN120_03195 NC_017378.1 646011 646295 R hypothetical protein complement(646011..646295) Helicobacter pylori Puno120 12368603 YP_005788310.1 CDS HPPN120_03200 NC_017378.1 646458 647603 R COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; transcriptional activator of flagella proteins complement(646458..647603) Helicobacter pylori Puno120 12368604 YP_005788311.1 CDS HPPN120_03205 NC_017378.1 647600 648073 R hypothetical protein complement(647600..648073) Helicobacter pylori Puno120 12368605 YP_005788312.1 CDS HPPN120_03210 NC_017378.1 648073 650553 R COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A complement(648073..650553) Helicobacter pylori Puno120 12368606 YP_005788313.1 CDS HPPN120_03215 NC_017378.1 650569 650955 R COG0818 Diacylglycerol kinase; diacylglycerol kinase complement(650569..650955) Helicobacter pylori Puno120 12368607 YP_005788314.1 CDS HPPN120_03220 NC_017378.1 650948 651976 R hypothetical protein complement(650948..651976) Helicobacter pylori Puno120 12368608 YP_005788315.1 CDS HPPN120_03225 NC_017378.1 652000 652221 D hypothetical protein 652000..652221 Helicobacter pylori Puno120 12368609 YP_005788316.1 CDS HPPN120_03230 NC_017378.1 652286 652786 R COG4647 Acetone carboxylase, gamma subunit; hypothetical protein complement(652286..652786) Helicobacter pylori Puno120 12368610 YP_005788317.1 CDS HPPN120_03235 NC_017378.1 652804 655101 R COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit; N-methylhydantoinase complement(652804..655101) Helicobacter pylori Puno120 12368611 YP_005788318.1 CDS HPPN120_03240 NC_017378.1 655113 657056 R COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A complement(655113..657056) Helicobacter pylori Puno120 12368612 YP_005788319.1 CDS HPPN120_03245 NC_017378.1 657133 657255 R COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A complement(657133..657255) Helicobacter pylori Puno120 12368613 YP_005788320.1 CDS HPPN120_03250 NC_017378.1 657503 658504 R COG3528 Uncharacterized protein conserved in bacteria; outer membrane protein complement(657503..658504) Helicobacter pylori Puno120 12368614 YP_005788321.1 CDS HPPN120_03255 NC_017378.1 658630 659994 R COG2031 Short chain fatty acids transporter; short-chain fatty acids transporter complement(658630..659994) Helicobacter pylori Puno120 12368615 YP_005788322.1 CDS HPPN120_03260 NC_017378.1 660013 660636 R COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; succinyl-CoA-transferase subunit B complement(660013..660636) Helicobacter pylori Puno120 12368616 YP_005788323.1 CDS HPPN120_03265 NC_017378.1 660633 661331 R COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; succinyl-CoA-transferase subunit A complement(660633..661331) Helicobacter pylori Puno120 12368617 YP_005788324.1 CDS HPPN120_03270 NC_017378.1 661342 662517 R COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(661342..662517) Helicobacter pylori Puno120 12368618 YP_005788325.1 CDS HPPN120_03275 NC_017378.1 662797 663609 R COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein complement(662797..663609) Helicobacter pylori Puno120 12368619 YP_005788326.1 CDS HPPN120_03280 NC_017378.1 663746 665674 D COG0370 Fe2+ transport system protein B; ferrous iron transport protein B 663746..665674 Helicobacter pylori Puno120 12368620 YP_005788327.1 CDS HPPN120_03285 NC_017378.1 665916 668219 D COG4772 Outer membrane receptor for Fe3+-dicitrate; iron(III) dicitrate transport protein 665916..668219 Helicobacter pylori Puno120 12368621 YP_005788328.1 CDS fliP NC_017378.1 668258 669004 R COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP complement(668258..669004) Helicobacter pylori Puno120 12368622 YP_005788329.1 CDS HPPN120_03295 NC_017378.1 668983 669129 R hypothetical protein complement(668983..669129) Helicobacter pylori Puno120 12368623 YP_005788330.1 CDS glmU NC_017378.1 669086 670387 D COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 669086..670387 Helicobacter pylori Puno120 12368624 YP_005788331.1 CDS HPPN120_03305 NC_017378.1 670608 670988 D hypothetical protein 670608..670988 Helicobacter pylori Puno120 12368625 YP_005788332.1 CDS HPPN120_03310 NC_017378.1 671028 671522 D hypothetical protein 671028..671522 Helicobacter pylori Puno120 12368626 YP_005788333.1 CDS HPPN120_03315 NC_017378.1 671688 674054 D COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 671688..674054 Helicobacter pylori Puno120 12368627 YP_005788334.1 CDS HPPN120_03320 NC_017378.1 674116 675063 D COG0673 Predicted dehydrogenases and related proteins; lipopolysaccharide biosynthesis protein WbpB 674116..675063 Helicobacter pylori Puno120 12368628 YP_005788335.1 CDS HPPN120_03325 NC_017378.1 675178 675945 D COG0730 Predicted permeases; hypothetical protein 675178..675945 Helicobacter pylori Puno120 12368629 YP_005788336.1 CDS HPPN120_03330 NC_017378.1 675949 676455 D COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 675949..676455 Helicobacter pylori Puno120 12368630 YP_005788337.1 CDS HPPN120_03335 NC_017378.1 676519 677586 R COG0582 Integrase; phage integrase family site specific recombinase complement(676519..677586) Helicobacter pylori Puno120 12368631 YP_005788338.1 CDS HPPN120_03340 NC_017378.1 677732 678649 R hypothetical protein complement(677732..678649) Helicobacter pylori Puno120 12368632 YP_005788339.1 CDS HPPN120_03345 NC_017378.1 678673 678789 R hypothetical protein complement(678673..678789) Helicobacter pylori Puno120 12368633 YP_005788340.1 CDS HPPN120_03350 NC_017378.1 678770 679942 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase complement(678770..679942) Helicobacter pylori Puno120 12368634 YP_005788341.1 CDS HPPN120_03355 NC_017378.1 680101 680913 R outer membrane protein HorF complement(680101..680913) Helicobacter pylori Puno120 12368635 YP_005788342.1 CDS HPPN120_03360 NC_017378.1 681035 682384 R hypothetical protein complement(681035..682384) Helicobacter pylori Puno120 12368636 YP_005788343.1 CDS HPPN120_03365 NC_017378.1 682381 685542 R COG4889 Predicted helicase; hypothetical protein complement(682381..685542) Helicobacter pylori Puno120 12368637 YP_005788344.1 CDS HPPN120_03370 NC_017378.1 685457 686995 R COG4889 Predicted helicase; hypothetical protein complement(685457..686995) Helicobacter pylori Puno120 12368638 YP_005788345.1 CDS HPPN120_03375 NC_017378.1 687077 688366 R COG0247 Fe-S oxidoreductase; anaerobic glycerol-3-phosphate dehydrogenase, subunit C (glpC) complement(687077..688366) Helicobacter pylori Puno120 12368639 YP_005788346.1 CDS HPPN120_03380 NC_017378.1 688363 689736 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(688363..689736) Helicobacter pylori Puno120 12368640 YP_005788347.1 CDS HPPN120_03385 NC_017378.1 689736 690251 R hypothetical protein complement(689736..690251) Helicobacter pylori Puno120 12368641 YP_005788348.1 CDS HPPN120_03390 NC_017378.1 690289 691386 R COG0082 Chorismate synthase; chorismate synthase complement(690289..691386) Helicobacter pylori Puno120 12368642 YP_005788349.1 CDS rnc NC_017378.1 691383 692099 R COG0571 dsRNA-specific ribonuclease; ribonuclease III complement(691383..692099) Helicobacter pylori Puno120 12368643 YP_005788350.1 CDS rnhA NC_017378.1 692074 692538 R COG0328 Ribonuclease HI; ribonuclease H complement(692074..692538) Helicobacter pylori Puno120 12368644 YP_005788351.1 CDS HPPN120_03405 NC_017378.1 692525 693541 R hypothetical protein complement(692525..693541) Helicobacter pylori Puno120 12368645 YP_005788352.1 CDS HPPN120_03410 NC_017378.1 693552 694754 R COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein complement(693552..694754) Helicobacter pylori Puno120 12368646 YP_005788353.1 CDS gatB NC_017378.1 694754 696178 R COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B complement(694754..696178) Helicobacter pylori Puno120 12368647 YP_005788354.1 CDS HPPN120_03420 NC_017378.1 696069 696227 D hypothetical protein 696069..696227 Helicobacter pylori Puno120 12368648 YP_005788355.1 CDS HPPN120_03425 NC_017378.1 696178 697476 R COG0612 Predicted Zn-dependent peptidases; processing protease complement(696178..697476) Helicobacter pylori Puno120 12368649 YP_005788356.1 CDS HPPN120_03430 NC_017378.1 697479 698540 R COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein complement(697479..698540) Helicobacter pylori Puno120 12368650 YP_005788357.1 CDS HPPN120_03435 NC_017378.1 698542 701187 R COG4775 Outer membrane protein/protective antigen OMA87; protective surface antigen D15 complement(698542..701187) Helicobacter pylori Puno120 12368651 YP_005788358.1 CDS HPPN120_03440 NC_017378.1 701360 702442 R COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein complement(701360..702442) Helicobacter pylori Puno120 12368652 YP_005788359.1 CDS HPPN120_03445 NC_017378.1 702564 702662 R hypothetical protein complement(702564..702662) Helicobacter pylori Puno120 12368653 YP_005788360.1 CDS HPPN120_03450 NC_017378.1 702736 703239 D COG1528 Ferritin-like protein; ferritin 702736..703239 Helicobacter pylori Puno120 12368654 YP_005788361.1 CDS HPPN120_03455 NC_017378.1 703255 703878 D COG0560 Phosphoserine phosphatase; phosphoserine phosphatase 703255..703878 Helicobacter pylori Puno120 12368655 YP_005788362.1 CDS HPPN120_03460 NC_017378.1 704007 705242 D alpha-(1,3)-fucosyltransferase 704007..705242 Helicobacter pylori Puno120 12368656 YP_005788363.1 CDS HPPN120_03465 NC_017378.1 705251 705829 R COG1573 Uracil-DNA glycosylase; hypothetical protein complement(705251..705829) Helicobacter pylori Puno120 12368657 YP_005788364.1 CDS aspA NC_017378.1 705886 707292 R COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase complement(705886..707292) Helicobacter pylori Puno120 12368658 YP_005788365.1 CDS HPPN120_03475 NC_017378.1 707350 708618 R COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase complement(707350..708618) Helicobacter pylori Puno120 12368659 YP_005788366.1 CDS HPPN120_03480 NC_017378.1 708621 709028 R hypothetical protein complement(708621..709028) Helicobacter pylori Puno120 12368660 YP_005788367.1 CDS HPPN120_03485 NC_017378.1 709040 709861 R COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU complement(709040..709861) Helicobacter pylori Puno120 12368661 YP_005788368.1 CDS HPPN120_03490 NC_017378.1 709858 711540 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); soluble lytic murein transglycosylase complement(709858..711540) Helicobacter pylori Puno120 12368662 YP_005788369.1 CDS HPPN120_03495 NC_017378.1 711549 711842 R COG0762 Predicted integral membrane protein; hypothetical protein complement(711549..711842) Helicobacter pylori Puno120 12368663 YP_005788370.1 CDS HPPN120_03500 NC_017378.1 711839 713158 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamylglutaminyl-tRNA synthetase complement(711839..713158) Helicobacter pylori Puno120 12368664 YP_005788371.1 CDS HPPN120_03505 NC_017378.1 713324 713977 R COG0778 Nitroreductase; NAD(P)H-flavin oxidoreductase complement(713324..713977) Helicobacter pylori Puno120 12368665 YP_005788372.1 CDS HPPN120_03510 NC_017378.1 714072 715295 R poly(A) polymerase; COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polynucleotide adenylyltransferase complement(714072..715295) Helicobacter pylori Puno120 12368666 YP_005788373.1 CDS HPPN120_03515 NC_017378.1 715358 716038 D COG0603 Predicted PP-loop superfamily ATPase; ExsB trans-regulatory protein 715358..716038 Helicobacter pylori Puno120 12368667 YP_005788374.1 CDS HPPN120_03520 NC_017378.1 716103 717017 R COG1012 NAD-dependent aldehyde dehydrogenases; outer membrane protein HopH complement(716103..717017) Helicobacter pylori Puno120 12368668 YP_005788375.1 CDS HPPN120_03525 NC_017378.1 717335 718579 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(717335..718579) Helicobacter pylori Puno120 12368669 YP_005788376.1 CDS HPPN120_03530 NC_017378.1 718582 719304 R COG1137 ABC-type (unclassified) transport system, ATPase component; putative abc transporter, ATP-binding protein complement(718582..719304) Helicobacter pylori Puno120 12368670 YP_005788377.1 CDS HPPN120_03535 NC_017378.1 719317 719718 R COG0802 Predicted ATPase or kinase; hypothetical protein complement(719317..719718) Helicobacter pylori Puno120 12368671 YP_005788378.1 CDS HPPN120_03540 NC_017378.1 719715 721454 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(719715..721454) Helicobacter pylori Puno120 12368672 YP_005788379.1 CDS HPPN120_03545 NC_017378.1 721523 722155 R COG1279 Lysine efflux permease; hypothetical protein complement(721523..722155) Helicobacter pylori Puno120 12368673 YP_005788380.1 CDS HPPN120_03550 NC_017378.1 722421 722843 D hypothetical protein 722421..722843 Helicobacter pylori Puno120 12368674 YP_005788381.1 CDS HPPN120_03555 NC_017378.1 722872 723342 D hypothetical protein 722872..723342 Helicobacter pylori Puno120 12368675 YP_005788382.1 CDS HPPN120_03560 NC_017378.1 723618 724616 R COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II complement(723618..724616) Helicobacter pylori Puno120 12368676 YP_005788383.1 CDS HPPN120_03565 NC_017378.1 724746 726077 D COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 724746..726077 Helicobacter pylori Puno120 12368677 YP_005788384.1 CDS HPPN120_03570 NC_017378.1 726153 728102 R putative Outer membrane protein complement(726153..728102) Helicobacter pylori Puno120 12368678 YP_005788385.1 CDS HPPN120_03575 NC_017378.1 728304 729221 R outer membrane protein complement(728304..729221) Helicobacter pylori Puno120 12368679 YP_005788386.1 CDS HPPN120_03580 NC_017378.1 729191 730177 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B complement(729191..730177) Helicobacter pylori Puno120 12368680 YP_005788387.1 CDS HPPN120_03585 NC_017378.1 730271 731287 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase complement(730271..731287) Helicobacter pylori Puno120 12368681 YP_005788388.1 CDS HPPN120_03590 NC_017378.1 731323 732390 R hypothetical protein complement(731323..732390) Helicobacter pylori Puno120 12368682 YP_005788389.1 CDS HPPN120_03595 NC_017378.1 732399 732704 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(732399..732704) Helicobacter pylori Puno120 12368683 YP_005788390.1 CDS HPPN120_03600 NC_017378.1 732810 734522 R COG0218 Predicted GTPase; hypothetical protein complement(732810..734522) Helicobacter pylori Puno120 12368684 YP_005788391.1 CDS HPPN120_03605 NC_017378.1 734519 735433 R hypothetical protein complement(734519..735433) Helicobacter pylori Puno120 12368685 YP_005788392.1 CDS HPPN120_03620 NC_017378.1 736327 737646 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(736327..737646) Helicobacter pylori Puno120 12368686 YP_005788393.1 CDS HPPN120_03625 NC_017378.1 737648 738109 R COG2236 Predicted phosphoribosyltransferases; putative nucleotide phosphoribosyltransferase complement(737648..738109) Helicobacter pylori Puno120 12368687 YP_005788394.1 CDS HPPN120_03630 NC_017378.1 738118 739227 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; putative aminotransferase complement(738118..739227) Helicobacter pylori Puno120 12368688 YP_005788395.1 CDS HPPN120_03635 NC_017378.1 739377 739853 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 739377..739853 Helicobacter pylori Puno120 12368689 YP_005788396.1 CDS ddl NC_017378.1 739931 740974 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 739931..740974 Helicobacter pylori Puno120 12368690 YP_005788397.1 CDS HPPN120_03645 NC_017378.1 740974 741699 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 740974..741699 Helicobacter pylori Puno120 12368691 YP_005788398.1 CDS HPPN120_03650 NC_017378.1 741686 743167 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 741686..743167 Helicobacter pylori Puno120 12368692 YP_005788399.1 CDS HPPN120_03655 NC_017378.1 743177 743662 D COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; histidine triad (HIT) family protein 743177..743662 Helicobacter pylori Puno120 12368693 YP_005788400.1 CDS HPPN120_03660 NC_017378.1 743754 744683 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 743754..744683 Helicobacter pylori Puno120 12368694 YP_005788401.1 CDS HPPN120_03665 NC_017378.1 744774 745919 R COG0772 Bacterial cell division membrane protein; Rod shape-determining protein RodA complement(744774..745919) Helicobacter pylori Puno120 12368696 YP_005788402.1 CDS HPPN120_03680 NC_017378.1 747287 748270 D COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 747287..748270 Helicobacter pylori Puno120 12368697 YP_005788403.1 CDS HPPN120_03685 NC_017378.1 748221 749480 D hypothetical protein 748221..749480 Helicobacter pylori Puno120 12368698 YP_005788404.1 CDS HPPN120_03690 NC_017378.1 749491 750672 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 749491..750672 Helicobacter pylori Puno120 12368699 YP_005788405.1 CDS HPPN120_03695 NC_017378.1 750669 751340 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; cell division protein 750669..751340 Helicobacter pylori Puno120 12368700 YP_005788406.1 CDS HPPN120_03700 NC_017378.1 751327 752133 D COG2177 Cell division protein; cell division protein FtsX 751327..752133 Helicobacter pylori Puno120 12368701 YP_005788407.1 CDS HPPN120_03705 NC_017378.1 752126 753328 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 752126..753328 Helicobacter pylori Puno120 12368702 YP_005788408.1 CDS HPPN120_03710 NC_017378.1 753422 753781 D COG1334 Uncharacterized flagellar protein FlaG; flagellar protein FlaG 753422..753781 Helicobacter pylori Puno120 12368703 YP_005788409.1 CDS fliD NC_017378.1 753798 755855 D COG1345 Flagellar capping protein; flagellar capping protein 753798..755855 Helicobacter pylori Puno120 12368704 YP_005788410.1 CDS fliS NC_017378.1 755897 756277 D COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 755897..756277 Helicobacter pylori Puno120 12368705 YP_005788411.1 CDS HPPN120_03725 NC_017378.1 756264 756503 D hypothetical protein 756264..756503 Helicobacter pylori Puno120 12368706 YP_005788412.1 CDS HPPN120_03730 NC_017378.1 756556 757263 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; hypothetical protein 756556..757263 Helicobacter pylori Puno120 12368707 YP_005788413.1 CDS HPPN120_03735 NC_017378.1 757229 757375 D hypothetical protein 757229..757375 Helicobacter pylori Puno120 12368708 YP_005788414.1 CDS HPPN120_03740 NC_017378.1 757379 758260 D COG0388 Predicted amidohydrolase; carbon-nitrogen hydrolase 757379..758260 Helicobacter pylori Puno120 12368709 YP_005788415.1 CDS HPPN120_03745 NC_017378.1 758291 758374 D hypothetical protein 758291..758374 Helicobacter pylori Puno120 12368710 YP_005788416.1 CDS HPPN120_03750 NC_017378.1 758368 759681 D COG2056 Predicted permease; hypothetical protein 758368..759681 Helicobacter pylori Puno120 12368711 YP_005788417.1 CDS HPPN120_03755 NC_017378.1 759744 760997 D COG0534 Na+-driven multidrug efflux pump; hypothetical protein 759744..760997 Helicobacter pylori Puno120 12368712 YP_005788418.1 CDS HPPN120_03760 NC_017378.1 760998 762509 R COG1418 Predicted HD superfamily hydrolase; phosphodiesterase complement(760998..762509) Helicobacter pylori Puno120 12368713 YP_005788419.1 CDS HPPN120_03765 NC_017378.1 762487 763131 R COG0212 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein complement(762487..763131) Helicobacter pylori Puno120 12368714 YP_005788420.1 CDS HPPN120_03770 NC_017378.1 763256 763813 D hypothetical protein 763256..763813 Helicobacter pylori Puno120 12368715 YP_005788421.1 CDS HPPN120_03775 NC_017378.1 763820 764713 D COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 763820..764713 Helicobacter pylori Puno120 12368716 YP_005788422.1 CDS HPPN120_03780 NC_017378.1 764722 765036 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(764722..765036) Helicobacter pylori Puno120 12368717 YP_005788423.1 CDS HPPN120_03785 NC_017378.1 765100 765714 R hypothetical protein complement(765100..765714) Helicobacter pylori Puno120 12368718 YP_005788424.1 CDS HPPN120_03790 NC_017378.1 765788 765895 R hypothetical protein complement(765788..765895) Helicobacter pylori Puno120 12368719 YP_005788425.1 CDS moaA NC_017378.1 766010 766975 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(766010..766975) Helicobacter pylori Puno120 12368720 YP_005788426.1 CDS HPPN120_03800 NC_017378.1 767061 767666 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 767061..767666 Helicobacter pylori Puno120 12368721 YP_005788427.1 CDS flhB NC_017378.1 767659 768735 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 767659..768735 Helicobacter pylori Puno120 12368722 YP_005788428.1 CDS HPPN120_03810 NC_017378.1 768808 769416 R hypothetical protein complement(768808..769416) Helicobacter pylori Puno120 12368723 YP_005788429.1 CDS HPPN120_03815 NC_017378.1 769402 769533 D hypothetical protein 769402..769533 Helicobacter pylori Puno120 12368724 YP_005788430.1 CDS HPPN120_03820 NC_017378.1 769563 770846 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(769563..770846) Helicobacter pylori Puno120 12368725 YP_005788431.1 CDS HPPN120_03825 NC_017378.1 770853 771944 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; hypothetical protein complement(770853..771944) Helicobacter pylori Puno120 12368726 YP_005788432.1 CDS HPPN120_03830 NC_017378.1 771955 773163 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(771955..773163) Helicobacter pylori Puno120 12368727 YP_005788433.1 CDS HPPN120_03835 NC_017378.1 773184 775514 R COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; penta-phosphate guanosine-3'-pyrophosphohydrolase (spoT) complement(773184..775514) Helicobacter pylori Puno120 12368728 YP_005788434.1 CDS rpoZ NC_017378.1 775501 775725 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(775501..775725) Helicobacter pylori Puno120 12368729 YP_005788435.1 CDS pyrH NC_017378.1 775768 776490 R COG0528 Uridylate kinase; uridylate kinase complement(775768..776490) Helicobacter pylori Puno120 12368730 YP_005788436.1 CDS HPPN120_03850 NC_017378.1 776600 777283 R COG1427 Predicted periplasmic solute-binding protein; hypothetical protein complement(776600..777283) Helicobacter pylori Puno120 12368731 YP_005788437.1 CDS HPPN120_03855 NC_017378.1 777413 779971 D COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 777413..779971 Helicobacter pylori Puno120 12368732 YP_005788438.1 CDS HPPN120_03860 NC_017378.1 780048 780314 D hypothetical protein 780048..780314 Helicobacter pylori Puno120 12368733 YP_005788439.1 CDS HPPN120_03865 NC_017378.1 780577 781866 D hypothetical protein 780577..781866 Helicobacter pylori Puno120 12368734 YP_005788440.1 CDS HPPN120_03870 NC_017378.1 781960 783327 D putative Outer membrane protein 781960..783327 Helicobacter pylori Puno120 12368735 YP_005788441.1 CDS HPPN120_03875 NC_017378.1 783334 783861 R hypothetical protein complement(783334..783861) Helicobacter pylori Puno120 12368736 YP_005788442.1 CDS lolA NC_017378.1 784354 784908 R COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone complement(784354..784908) Helicobacter pylori Puno120 12368737 YP_005788443.1 CDS HPPN120_03885 NC_017378.1 785055 787652 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 785055..787652 Helicobacter pylori Puno120 12368738 YP_005788444.1 CDS HPPN120_03890 NC_017378.1 787642 788874 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein release system transmembrane protein 787642..788874 Helicobacter pylori Puno120 12368739 YP_005788445.1 CDS HPPN120_03895 NC_017378.1 789153 790652 D outer membrane protein HofF 789153..790652 Helicobacter pylori Puno120 12368740 YP_005788446.1 CDS HPPN120_03900 NC_017378.1 790811 792079 R COG0732 Restriction endonuclease S subunits; HP0790-like protein complement(790811..792079) Helicobacter pylori Puno120 12368741 YP_005788447.1 CDS HPPN120_03905 NC_017378.1 792115 794175 R COG2217 Cation transport ATPase; cadmium-transporting ATPase complement(792115..794175) Helicobacter pylori Puno120 12368742 YP_005788448.1 CDS HPPN120_03910 NC_017378.1 794200 795720 R COG0606 Predicted ATPase with chaperone activity; magnesium chelatase family protein complement(794200..795720) Helicobacter pylori Puno120 12368743 YP_005788449.1 CDS def NC_017378.1 795723 796250 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(795723..796250) Helicobacter pylori Puno120 12368744 YP_005788450.1 CDS clpP NC_017378.1 796255 796842 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(796255..796842) Helicobacter pylori Puno120 12368745 YP_005788451.1 CDS tig NC_017378.1 796863 798218 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(796863..798218) Helicobacter pylori Puno120 12368746 YP_005788452.1 CDS HPPN120_03930 NC_017378.1 798331 799167 R outer membrane protein (omp18) complement(798331..799167) Helicobacter pylori Puno120 12368747 YP_005788453.1 CDS HPPN120_03935 NC_017378.1 799192 799974 R flagellar sheath adhesin complement(799192..799974) Helicobacter pylori Puno120 12368748 YP_005788454.1 CDS moaC NC_017378.1 800094 800570 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(800094..800570) Helicobacter pylori Puno120 12368749 YP_005788455.1 CDS mogA NC_017378.1 800579 801109 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA complement(800579..801109) Helicobacter pylori Puno120 12368750 YP_005788456.1 CDS HPPN120_03950 NC_017378.1 801122 801559 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin converting factor subunit 2 complement(801122..801559) Helicobacter pylori Puno120 12368751 YP_005788457.1 CDS HPPN120_03955 NC_017378.1 801560 801781 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin converting factor, subunit 1 (moaD) complement(801560..801781) Helicobacter pylori Puno120 12368752 YP_005788458.1 CDS ribA NC_017378.1 801855 802433 R COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II complement(801855..802433) Helicobacter pylori Puno120 12368753 YP_005788459.1 CDS HPPN120_03965 NC_017378.1 803264 803401 R hypothetical protein complement(803264..803401) Helicobacter pylori Puno120 12368754 YP_005788460.1 CDS HPPN120_03970 NC_017378.1 803478 804512 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(803478..804512) Helicobacter pylori Puno120 12368755 YP_005788461.1 CDS HPPN120_03975 NC_017378.1 804595 805431 R COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein complement(804595..805431) Helicobacter pylori Puno120 12368756 YP_005788462.1 CDS HPPN120_03980 NC_017378.1 805513 806133 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 805513..806133 Helicobacter pylori Puno120 12368757 YP_005788463.1 CDS HPPN120_03985 NC_017378.1 806137 806265 R iron(III) dicitrate transport protein complement(806137..806265) Helicobacter pylori Puno120 12368758 YP_005788464.1 CDS acpS NC_017378.1 806379 806738 R COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase complement(806379..806738) Helicobacter pylori Puno120 12368759 YP_005788465.1 CDS fliL NC_017378.1 806745 807209 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(806745..807209) Helicobacter pylori Puno120 12368760 YP_005788466.1 CDS HPPN120_04000 NC_017378.1 807304 807906 R COG0742 N6-adenine-specific methylase; hypothetical protein complement(807304..807906) Helicobacter pylori Puno120 12368761 YP_005788467.1 CDS HPPN120_04005 NC_017378.1 807885 808211 R hypothetical protein complement(807885..808211) Helicobacter pylori Puno120 12368762 YP_005788468.1 CDS HPPN120_04010 NC_017378.1 808645 809655 R COG1565 Uncharacterized conserved protein; hypothetical protein complement(808645..809655) Helicobacter pylori Puno120 12368763 YP_005788469.1 CDS HPPN120_04015 NC_017378.1 809788 810405 D COG0491 Zn-dependent hydrolases, including glyoxylases; hypothetical protein 809788..810405 Helicobacter pylori Puno120 12368764 YP_005788470.1 CDS HPPN120_04020 NC_017378.1 810406 811173 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamin biosynthesis protein (thiF) 810406..811173 Helicobacter pylori Puno120 12368765 YP_005788471.1 CDS HPPN120_04025 NC_017378.1 811189 811962 D COG1291 Flagellar motor component; flagellar motor protein MotA 811189..811962 Helicobacter pylori Puno120 12368766 YP_005788472.1 CDS motB NC_017378.1 811965 812732 D COG1360 Flagellar motor protein; flagellar motor protein MotB 811965..812732 Helicobacter pylori Puno120 12368767 YP_005788473.1 CDS HPPN120_04035 NC_017378.1 812736 813185 D hypothetical protein 812736..813185 Helicobacter pylori Puno120 12368768 YP_005788474.1 CDS HPPN120_04040 NC_017378.1 813369 815030 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; osmoprotection protein (proWX) 813369..815030 Helicobacter pylori Puno120 12368769 YP_005788475.1 CDS HPPN120_04045 NC_017378.1 815032 815673 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; osmoprotection protein (proV) 815032..815673 Helicobacter pylori Puno120 12368770 YP_005788476.1 CDS HPPN120_04050 NC_017378.1 815856 816317 D hypothetical protein 815856..816317 Helicobacter pylori Puno120 12368771 YP_005788477.1 CDS uvrC NC_017378.1 816318 818102 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 816318..818102 Helicobacter pylori Puno120 12368772 YP_005788478.1 CDS HPPN120_04060 NC_017378.1 818113 819378 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 818113..819378 Helicobacter pylori Puno120 12368773 YP_005788479.1 CDS HPPN120_04065 NC_017378.1 819379 819723 D COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 819379..819723 Helicobacter pylori Puno120 12368774 YP_005788480.1 CDS HPPN120_04070 NC_017378.1 819812 820132 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 819812..820132 Helicobacter pylori Puno120 12368775 YP_005788481.1 CDS HPPN120_04075 NC_017378.1 820138 821073 D COG0492 Thioredoxin reductase; thioredoxin reductase 820138..821073 Helicobacter pylori Puno120 12368776 YP_005788482.1 CDS HPPN120_04080 NC_017378.1 821239 822060 D COG3306 Glycosyltransferase involved in LPS biosynthesis; lipooligosaccharide 5G8 epitope biosynthesis-associated protein (lex2B) 821239..822060 Helicobacter pylori Puno120 12368777 YP_005788483.1 CDS HPPN120_04085 NC_017378.1 822265 822513 R COG0724 RNA-binding proteins (RRM domain); RNA binding protein complement(822265..822513) Helicobacter pylori Puno120 12368778 YP_005788484.1 CDS HPPN120_04090 NC_017378.1 822661 822816 R hypothetical protein complement(822661..822816) Helicobacter pylori Puno120 12368779 YP_005788485.1 CDS HPPN120_04095 NC_017378.1 822832 823512 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(822832..823512) Helicobacter pylori Puno120 12368780 YP_005788486.1 CDS HPPN120_04100 NC_017378.1 823634 825079 R COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase complement(823634..825079) Helicobacter pylori Puno120 12368781 YP_005788487.1 CDS gatA NC_017378.1 825089 826450 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(825089..826450) Helicobacter pylori Puno120 12368782 YP_005788488.1 CDS coaE NC_017378.1 826509 827099 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(826509..827099) Helicobacter pylori Puno120 12368783 YP_005788489.1 CDS speE NC_017378.1 827101 827889 R COG0421 Spermidine synthase; spermidine synthase complement(827101..827889) Helicobacter pylori Puno120 12368784 YP_005788490.1 CDS HPPN120_04120 NC_017378.1 827974 828852 R hypothetical protein complement(827974..828852) Helicobacter pylori Puno120 12368785 YP_005788491.1 CDS HPPN120_04125 NC_017378.1 828929 830314 D COG1160 Predicted GTPases; GTP-binding protein Der 828929..830314 Helicobacter pylori Puno120 12368786 YP_005788492.1 CDS HPPN120_04130 NC_017378.1 830452 830736 D COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 830452..830736 Helicobacter pylori Puno120 12368787 YP_005788493.1 CDS HPPN120_04135 NC_017378.1 830975 831094 R hypothetical protein complement(830975..831094) Helicobacter pylori Puno120 12368789 YP_005788494.1 CDS HPPN120_04140 NC_017378.1 831411 832016 D COG3018 Uncharacterized protein conserved in bacteria; hypothetical protein 831411..832016 Helicobacter pylori Puno120 12368790 YP_005788495.1 CDS HPPN120_04145 NC_017378.1 832035 832652 D hypothetical protein 832035..832652 Helicobacter pylori Puno120 12368791 YP_005788496.1 CDS HPPN120_04150 NC_017378.1 832649 834412 D COG2067 Long-chain fatty acid transport protein; outer membrane protein P1 832649..834412 Helicobacter pylori Puno120 12368792 YP_005788497.1 CDS HPPN120_04155 NC_017378.1 834416 835399 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; UDP-GlcNAc C6 dehydratase 834416..835399 Helicobacter pylori Puno120 12368793 YP_005788498.1 CDS HPPN120_04160 NC_017378.1 835396 836673 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 835396..836673 Helicobacter pylori Puno120 12368794 YP_005788499.1 CDS HPPN120_04165 NC_017378.1 836673 837410 D hypothetical protein 836673..837410 Helicobacter pylori Puno120 12368795 YP_005788500.1 CDS HPPN120_04170 NC_017378.1 837417 838544 R bifunctional alpha-2,3/-2,8-sialyltransferase complement(837417..838544) Helicobacter pylori Puno120 12368796 YP_005788501.1 CDS HPPN120_04175 NC_017378.1 838541 839194 R COG1083 CMP-N-acetylneuraminic acid synthetase; N-acylneuraminate cytidylyltransferase complement(838541..839194) Helicobacter pylori Puno120 12368797 YP_005788502.1 CDS HPPN120_04180 NC_017378.1 839191 840291 R COG0381 UDP-N-acetylglucosamine 2-epimerase; hypothetical protein complement(839191..840291) Helicobacter pylori Puno120 12368798 YP_005788503.1 CDS HPPN120_04185 NC_017378.1 840431 841468 R COG2089 Sialic acid synthase; N-acetylneuraminic acid synthetase complement(840431..841468) Helicobacter pylori Puno120 12368799 YP_005788504.1 CDS HPPN120_04190 NC_017378.1 841534 844506 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(841534..844506) Helicobacter pylori Puno120 12368800 YP_005788505.1 CDS thiE NC_017378.1 844599 845258 R COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(844599..845258) Helicobacter pylori Puno120 12368801 YP_005788506.1 CDS HPPN120_04200 NC_017378.1 845251 845898 R COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; thiamine biosynthesis protein (thi) complement(845251..845898) Helicobacter pylori Puno120 12368802 YP_005788507.1 CDS HPPN120_04205 NC_017378.1 845923 846702 R COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase complement(845923..846702) Helicobacter pylori Puno120 12368803 YP_005788508.1 CDS HPPN120_04210 NC_017378.1 846909 847595 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 846909..847595 Helicobacter pylori Puno120 12368804 YP_005788509.1 CDS HPPN120_04215 NC_017378.1 847619 848560 R COG2958 Uncharacterized protein conserved in bacteria; hypothetical protein complement(847619..848560) Helicobacter pylori Puno120 12368805 YP_005788510.1 CDS HPPN120_04220 NC_017378.1 848557 850158 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(848557..850158) Helicobacter pylori Puno120 12368806 YP_005788511.1 CDS HPPN120_04225 NC_017378.1 850407 851384 D COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 850407..851384 Helicobacter pylori Puno120 12368807 YP_005788512.1 CDS HPPN120_04230 NC_017378.1 851391 851579 R hypothetical protein complement(851391..851579) Helicobacter pylori Puno120 12368808 YP_005788513.1 CDS HPPN120_04235 NC_017378.1 851551 852129 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(851551..852129) Helicobacter pylori Puno120 12368809 YP_005788514.1 CDS HPPN120_04240 NC_017378.1 852122 853513 R COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; ADP-heptose synthase complement(852122..853513) Helicobacter pylori Puno120 12368810 YP_005788515.1 CDS HPPN120_04245 NC_017378.1 853510 854502 R COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase complement(853510..854502) Helicobacter pylori Puno120 12368811 YP_005788516.1 CDS HPPN120_04250 NC_017378.1 854511 855035 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(854511..855035) Helicobacter pylori Puno120 12368812 YP_005788517.1 CDS HPPN120_04255 NC_017378.1 855022 855759 R COG2836 Uncharacterized conserved protein; hypothetical protein complement(855022..855759) Helicobacter pylori Puno120 12368813 YP_005788518.1 CDS HPPN120_04260 NC_017378.1 855750 856421 R COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase complement(855750..856421) Helicobacter pylori Puno120 12368814 YP_005788519.1 CDS HPPN120_04265 NC_017378.1 856426 858324 R hypothetical protein complement(856426..858324) Helicobacter pylori Puno120 12368815 YP_005788520.1 CDS HPPN120_04270 NC_017378.1 858329 858985 R hypothetical protein complement(858329..858985) Helicobacter pylori Puno120 12368816 YP_005788521.1 CDS dut NC_017378.1 858982 859419 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(858982..859419) Helicobacter pylori Puno120 12368817 YP_005788522.1 CDS greA NC_017378.1 859409 859903 R COG0782 Transcription elongation factor; transcription elongation factor GreA complement(859409..859903) Helicobacter pylori Puno120 12368818 YP_005788523.1 CDS HPPN120_04285 NC_017378.1 859944 861026 R COG0763 Lipid A disaccharide synthetase; ipid-A-disaccharide synthase complement(859944..861026) Helicobacter pylori Puno120 12368819 YP_005788524.1 CDS HPPN120_04290 NC_017378.1 861026 861487 R hypothetical protein complement(861026..861487) Helicobacter pylori Puno120 12368820 YP_005788525.1 CDS hypA NC_017378.1 861494 861847 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(861494..861847) Helicobacter pylori Puno120 12368821 YP_005788526.1 CDS flgE NC_017378.1 861906 864062 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(861906..864062) Helicobacter pylori Puno120 12368822 YP_005788527.1 CDS HPPN120_04305 NC_017378.1 864271 865005 R COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(864271..865005) Helicobacter pylori Puno120 12368823 YP_005788528.1 CDS HPPN120_04310 NC_017378.1 865357 865686 D COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate uptake protein 865357..865686 Helicobacter pylori Puno120 12368824 YP_005788529.1 CDS HPPN120_04315 NC_017378.1 865744 865959 R hypothetical protein complement(865744..865959) Helicobacter pylori Puno120 12368825 YP_005788530.1 CDS HPPN120_04320 NC_017378.1 866044 866919 R hypothetical protein complement(866044..866919) Helicobacter pylori Puno120 12368826 YP_005788531.1 CDS HPPN120_04325 NC_017378.1 867069 868595 R COG0753 Catalase; catalase complement(867069..868595) Helicobacter pylori Puno120 12368827 YP_005788532.1 CDS HPPN120_04330 NC_017378.1 868910 871279 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 868910..871279 Helicobacter pylori Puno120 12368828 YP_005788533.1 CDS ruvC NC_017378.1 871280 871753 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(871280..871753) Helicobacter pylori Puno120 12368829 YP_005788534.1 CDS HPPN120_04340 NC_017378.1 871884 872609 D COG1432 Uncharacterized conserved protein; hypothetical protein 871884..872609 Helicobacter pylori Puno120 12368830 YP_005788535.1 CDS HPPN120_04345 NC_017378.1 872711 872878 R hypothetical protein complement(872711..872878) Helicobacter pylori Puno120 12368831 YP_005788536.1 CDS HPPN120_04350 NC_017378.1 873017 873457 R hypothetical protein complement(873017..873457) Helicobacter pylori Puno120 12368832 YP_005788537.1 CDS HPPN120_04355 NC_017378.1 873544 875478 R hypothetical protein complement(873544..875478) Helicobacter pylori Puno120 12368833 YP_005788538.1 CDS ruvA NC_017378.1 875673 876224 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(875673..876224) Helicobacter pylori Puno120 12368834 YP_005788539.1 CDS HPPN120_04365 NC_017378.1 876249 878087 R hypothetical protein complement(876249..878087) Helicobacter pylori Puno120 12368835 YP_005788540.1 CDS HPPN120_04370 NC_017378.1 878180 879640 D COG0728 Uncharacterized membrane protein, putative virulence factor; virulence factor MviN 878180..879640 Helicobacter pylori Puno120 12368836 YP_005788541.1 CDS cysS NC_017378.1 879641 881038 D COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 879641..881038 Helicobacter pylori Puno120 12368837 YP_005788542.1 CDS HPPN120_04380 NC_017378.1 881261 885136 D vacuolating cytotoxin 881261..885136 Helicobacter pylori Puno120 12368838 YP_005788543.1 CDS HPPN120_04385 NC_017378.1 885282 886415 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(885282..886415) Helicobacter pylori Puno120 12368839 YP_005788544.1 CDS HPPN120_04390 NC_017378.1 886478 887245 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron(III) dicitrate transporter, ATP-binding protein complement(886478..887245) Helicobacter pylori Puno120 12368840 YP_005788545.1 CDS HPPN120_04395 NC_017378.1 887245 888225 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron(III) dicitrate ABC transporter, permease protein (fecD) complement(887245..888225) Helicobacter pylori Puno120 12368841 YP_005788546.1 CDS HPPN120_04400 NC_017378.1 888218 889066 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain oxidoreductase complement(888218..889066) Helicobacter pylori Puno120 12368842 YP_005788547.1 CDS HPPN120_04405 NC_017378.1 889207 889731 D COG1607 Acyl-CoA hydrolase; hypothetical protein 889207..889731 Helicobacter pylori Puno120 12368843 YP_005788548.1 CDS HPPN120_04410 NC_017378.1 889817 890092 R COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein complement(889817..890092) Helicobacter pylori Puno120 12368844 YP_005788549.1 CDS HPPN120_04415 NC_017378.1 890073 890450 R hypothetical protein complement(890073..890450) Helicobacter pylori Puno120 12368845 YP_005788550.1 CDS HPPN120_04420 NC_017378.1 890449 890604 D hypothetical protein 890449..890604 Helicobacter pylori Puno120 12368846 YP_005788551.1 CDS HPPN120_04425 NC_017378.1 890702 892942 R outer membrane protein BabA complement(890702..892942) Helicobacter pylori Puno120 12368847 YP_005788552.1 CDS HPPN120_04430 NC_017378.1 893287 893913 D hypothetical protein 893287..893913 Helicobacter pylori Puno120 12368850 YP_005788553.1 CDS HPPN120_04435 NC_017378.1 893864 894976 R COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD complement(893864..894976) Helicobacter pylori Puno120 12368851 YP_005788554.1 CDS HPPN120_04440 NC_017378.1 894989 895225 R COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone complement(894989..895225) Helicobacter pylori Puno120 12368852 YP_005788555.1 CDS HPPN120_04445 NC_017378.1 895225 895953 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase/urease nickel incorporation protein hypB complement(895225..895953) Helicobacter pylori Puno120 12368853 YP_005788556.1 CDS HPPN120_04450 NC_017378.1 896069 896188 R hypothetical protein complement(896069..896188) Helicobacter pylori Puno120 12368854 YP_005788557.1 CDS HPPN120_04455 NC_017378.1 896213 896512 R COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; hypothetical protein complement(896213..896512) Helicobacter pylori Puno120 12368855 YP_005788558.1 CDS HPPN120_04460 NC_017378.1 896523 897728 R COG0282 Acetate kinase; acetate kinase A/propionate kinase 2 complement(896523..897728) Helicobacter pylori Puno120 12368856 YP_005788559.1 CDS HPPN120_04465 NC_017378.1 897739 899277 R COG0280 Phosphotransacetylase; phosphotransacetylase complement(897739..899277) Helicobacter pylori Puno120 12368857 YP_005788560.1 CDS HPPN120_04470 NC_017378.1 899502 901055 D hypothetical protein 899502..901055 Helicobacter pylori Puno120 12368858 YP_005788561.1 CDS flgD NC_017378.1 901106 902065 D COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 901106..902065 Helicobacter pylori Puno120 12368859 YP_005788562.1 CDS flgE NC_017378.1 902062 903879 D COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 902062..903879 Helicobacter pylori Puno120 12368860 YP_005788563.1 CDS HPPN120_04485 NC_017378.1 904052 905212 D COG0827 Adenine-specific DNA methylase; type II DNA modification enzyme (methyltransferase) 904052..905212 Helicobacter pylori Puno120 12368861 YP_005788564.1 CDS HPPN120_04490 NC_017378.1 905206 907236 D COG0210 Superfamily I DNA and RNA helicases; rep helicase, single-stranded DNA-dependent ATPase 905206..907236 Helicobacter pylori Puno120 12368862 YP_005788565.1 CDS HPPN120_04495 NC_017378.1 907700 907795 R hypothetical protein complement(907700..907795) Helicobacter pylori Puno120 12368863 YP_005788566.1 CDS HPPN120_04500 NC_017378.1 908038 909591 D outer membrane protein (omp20) 908038..909591 Helicobacter pylori Puno120 12368864 YP_005788567.1 CDS HPPN120_04505 NC_017378.1 909613 911208 D outer membrane protein HopB 909613..911208 Helicobacter pylori Puno120 12368865 YP_005788568.1 CDS HPPN120_04510 NC_017378.1 911755 913299 R COG1190 Lysyl-tRNA synthetase (class II); putative Outer membrane protein complement(911755..913299) Helicobacter pylori Puno120 12368866 YP_005788569.1 CDS HPPN120_04515 NC_017378.1 913536 915971 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein complement(913536..915971) Helicobacter pylori Puno120 12368867 YP_005788570.1 CDS HPPN120_04520 NC_017378.1 916151 916582 R hypothetical protein complement(916151..916582) Helicobacter pylori Puno120 12368868 YP_005788571.1 CDS carB NC_017378.1 916587 919844 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(916587..919844) Helicobacter pylori Puno120 12368869 YP_005788572.1 CDS HPPN120_04530 NC_017378.1 919939 920631 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(919939..920631) Helicobacter pylori Puno120 12368870 YP_005788573.1 CDS HPPN120_04535 NC_017378.1 920776 921771 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 920776..921771 Helicobacter pylori Puno120 12368871 YP_005788574.1 CDS HPPN120_04540 NC_017378.1 921850 929085 D vacuolating cytotoxin VacA-like protein 921850..929085 Helicobacter pylori Puno120 12368872 YP_005788575.1 CDS HPPN120_04545 NC_017378.1 929137 930234 D outer membrane protein (omp22) 929137..930234 Helicobacter pylori Puno120 12368873 YP_005788576.1 CDS HPPN120_04550 NC_017378.1 930289 930495 R COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase complement(930289..930495) Helicobacter pylori Puno120 12368874 YP_005788577.1 CDS recR NC_017378.1 930641 931222 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 930641..931222 Helicobacter pylori Puno120 12368875 YP_005788578.1 CDS truD NC_017378.1 931219 932364 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 931219..932364 Helicobacter pylori Puno120 12368876 YP_005788579.1 CDS HPPN120_04565 NC_017378.1 932351 933283 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 932351..933283 Helicobacter pylori Puno120 12368877 YP_005788580.1 CDS folE NC_017378.1 933284 933826 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 933284..933826 Helicobacter pylori Puno120 12368878 YP_005788581.1 CDS HPPN120_04575 NC_017378.1 933842 934753 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 933842..934753 Helicobacter pylori Puno120 12368879 YP_005788582.1 CDS surE NC_017378.1 934750 935553 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 934750..935553 Helicobacter pylori Puno120 12368880 YP_005788583.1 CDS HPPN120_04585 NC_017378.1 935550 936209 D hypothetical protein 935550..936209 Helicobacter pylori Puno120 12368881 YP_005788584.1 CDS HPPN120_04590 NC_017378.1 936213 936815 D COG0720 6-pyruvoyl-tetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase 936213..936815 Helicobacter pylori Puno120 12368882 YP_005788585.1 CDS HPPN120_04595 NC_017378.1 936812 937567 D COG0602 Organic radical activating enzymes; hypothetical protein 936812..937567 Helicobacter pylori Puno120 12368883 YP_005788586.1 CDS HPPN120_04600 NC_017378.1 937578 938063 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 937578..938063 Helicobacter pylori Puno120 12368884 YP_005788587.1 CDS HPPN120_04615 NC_017378.1 940383 941552 R COG0477 Permeases of the major facilitator superfamily; proline and betaine transporter complement(940383..941552) Helicobacter pylori Puno120 12368885 YP_005788588.1 CDS HPPN120_04620 NC_017378.1 941982 942191 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(941982..942191) Helicobacter pylori Puno120 12368886 YP_005788589.1 CDS HPPN120_04625 NC_017378.1 942259 942972 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(942259..942972) Helicobacter pylori Puno120 12368887 YP_005788590.1 CDS HPPN120_04630 NC_017378.1 942956 943732 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; ABC-type polar amino acid transport,periplasmic component complement(942956..943732) Helicobacter pylori Puno120 12368888 YP_005788591.1 CDS HPPN120_04635 NC_017378.1 943803 944936 R COG0787 Alanine racemase; alanine racemase complement(943803..944936) Helicobacter pylori Puno120 12368889 YP_005788592.1 CDS HPPN120_04640 NC_017378.1 944943 946295 R COG1115 Na+/alanine symporter; D-alanine glycine permease complement(944943..946295) Helicobacter pylori Puno120 12368890 YP_005788593.1 CDS HPPN120_04645 NC_017378.1 946344 947576 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase complement(946344..947576) Helicobacter pylori Puno120 12368891 YP_005788594.1 CDS HPPN120_04650 NC_017378.1 947599 947976 R COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein complement(947599..947976) Helicobacter pylori Puno120 12368892 YP_005788595.1 CDS HPPN120_04655 NC_017378.1 948392 948691 D protein tRNA-associated locus protein 948392..948691 Helicobacter pylori Puno120 12368894 YP_005788596.1 CDS HPPN120_04660 NC_017378.1 949252 950742 D COG1757 Na+/H+ antiporter; integral membrane protein 949252..950742 Helicobacter pylori Puno120 12368898 YP_005788597.1 CDS HPPN120_04665 NC_017378.1 951055 951417 D hypothetical protein 951055..951417 Helicobacter pylori Puno120 12368899 YP_005788598.1 CDS HPPN120_04670 NC_017378.1 951955 952968 R hypothetical protein complement(951955..952968) Helicobacter pylori Puno120 12368900 YP_005788599.1 CDS HPPN120_04675 NC_017378.1 952978 953430 R COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase complement(952978..953430) Helicobacter pylori Puno120 12368901 YP_005788600.1 CDS HPPN120_04680 NC_017378.1 953444 954313 R COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta complement(953444..954313) Helicobacter pylori Puno120 12368902 YP_005788601.1 CDS HPPN120_04685 NC_017378.1 954394 955008 D COG0540 Aspartate carbamoyltransferase, catalytic chain; putative recombination protein RecO 954394..955008 Helicobacter pylori Puno120 12368903 YP_005788602.1 CDS HPPN120_04690 NC_017378.1 955019 955675 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); hypothetical protein 955019..955675 Helicobacter pylori Puno120 12368904 YP_005788603.1 CDS HPPN120_04695 NC_017378.1 955678 956244 R hypothetical protein complement(955678..956244) Helicobacter pylori Puno120 12368905 YP_005788604.1 CDS HPPN120_04700 NC_017378.1 956309 956941 R COG0778 Nitroreductase; oxygen-insensitive NADPH nitroreductase complement(956309..956941) Helicobacter pylori Puno120 12368906 YP_005788605.1 CDS HPPN120_04705 NC_017378.1 956952 957791 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(956952..957791) Helicobacter pylori Puno120 12368907 YP_005788606.1 CDS HPPN120_04710 NC_017378.1 957801 958529 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(957801..958529) Helicobacter pylori Puno120 12368908 YP_005788607.1 CDS HPPN120_04715 NC_017378.1 958547 959728 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(958547..959728) Helicobacter pylori Puno120 12368909 YP_005788608.1 CDS HPPN120_04720 NC_017378.1 959729 960493 R COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein complement(959729..960493) Helicobacter pylori Puno120 12368910 YP_005788609.1 CDS HPPN120_04725 NC_017378.1 960503 961234 R COG0327 Uncharacterized conserved protein; hypothetical protein complement(960503..961234) Helicobacter pylori Puno120 12368911 YP_005788610.1 CDS glyQ NC_017378.1 961236 962132 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(961236..962132) Helicobacter pylori Puno120 12368912 YP_005788611.1 CDS gpsA NC_017378.1 962146 963084 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(962146..963084) Helicobacter pylori Puno120 12368913 YP_005788612.1 CDS acpP NC_017378.1 963189 963407 R COG0236 Acyl carrier protein; acyl carrier protein complement(963189..963407) Helicobacter pylori Puno120 12368914 YP_005788613.1 CDS HPPN120_04745 NC_017378.1 964999 965334 R interferon-induced GTP-binding protein Mx2 complement(964999..965334) Helicobacter pylori Puno120 12368915 YP_005788614.1 CDS HPPN120_04750 NC_017378.1 965334 967673 R COG0699 Predicted GTPases (dynamin-related); hypothetical protein complement(965334..967673) Helicobacter pylori Puno120 12368916 YP_005788615.1 CDS HPPN120_04770 NC_017378.1 969529 969816 R COG3309 Uncharacterized virulence-associated protein D; virulence associated protein D complement(969529..969816) Helicobacter pylori Puno120 12368917 YP_005788616.1 CDS HPPN120_04775 NC_017378.1 969884 970165 R hypothetical protein complement(969884..970165) Helicobacter pylori Puno120 12368918 YP_005788617.1 CDS HPPN120_04780 NC_017378.1 970176 973235 R COG3696 Putative silver efflux pump; putative cation efflux system protein complement(970176..973235) Helicobacter pylori Puno120 12368919 YP_005788618.1 CDS HPPN120_04785 NC_017378.1 973235 974314 R COG0845 Membrane-fusion protein; nickel-cobalt-cadmium resistance protein (nccB) complement(973235..974314) Helicobacter pylori Puno120 12368920 YP_005788619.1 CDS HPPN120_04790 NC_017378.1 974311 975618 R hypothetical protein complement(974311..975618) Helicobacter pylori Puno120 12368921 YP_005788620.1 CDS glyS NC_017378.1 975608 977713 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(975608..977713) Helicobacter pylori Puno120 12368922 YP_005788621.1 CDS HPPN120_04800 NC_017378.1 977848 977991 R hypothetical protein complement(977848..977991) Helicobacter pylori Puno120 12368923 YP_005788622.1 CDS HPPN120_04805 NC_017378.1 978905 980380 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 978905..980380 Helicobacter pylori Puno120 12368924 YP_005788623.1 CDS gatC NC_017378.1 980395 980676 D COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 980395..980676 Helicobacter pylori Puno120 12368925 YP_005788624.1 CDS HPPN120_04815 NC_017378.1 980749 982059 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(980749..982059) Helicobacter pylori Puno120 12368926 YP_005788625.1 CDS HPPN120_04820 NC_017378.1 982190 983653 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 982190..983653 Helicobacter pylori Puno120 12368927 YP_005788626.1 CDS HPPN120_04825 NC_017378.1 983668 985149 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 983668..985149 Helicobacter pylori Puno120 12368928 YP_005788627.1 CDS HPPN120_04830 NC_017378.1 985284 986432 D COG0206 Cell division GTPase; cell division protein FtsZ 985284..986432 Helicobacter pylori Puno120 12368929 YP_005788628.1 CDS HPPN120_04835 NC_017378.1 986611 987075 R COG0675 Transposase and inactivated derivatives; IS606 transposase complement(986611..987075) Helicobacter pylori Puno120 12368930 YP_005788629.1 CDS HPPN120_04840 NC_017378.1 987265 987426 R hypothetical protein complement(987265..987426) Helicobacter pylori Puno120 12368931 YP_005788630.1 CDS HPPN120_04855 NC_017378.1 988312 988491 R hypothetical protein complement(988312..988491) Helicobacter pylori Puno120 12368932 YP_005788631.1 CDS HPPN120_04860 NC_017378.1 988656 989018 R COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit complement(988656..989018) Helicobacter pylori Puno120 12368933 YP_005788632.1 CDS HPPN120_04865 NC_017378.1 989024 989329 R hypothetical protein complement(989024..989329) Helicobacter pylori Puno120 12368934 YP_005788633.1 CDS HPPN120_04870 NC_017378.1 989345 990451 R hypothetical protein complement(989345..990451) Helicobacter pylori Puno120 12368935 YP_005788634.1 CDS HPPN120_04875 NC_017378.1 990454 991200 R hypothetical protein complement(990454..991200) Helicobacter pylori Puno120 12368936 YP_005788635.1 CDS HPPN120_04890 NC_017378.1 994238 996448 R COG1401 GTPase subunit of restriction endonuclease; hypothetical protein complement(994238..996448) Helicobacter pylori Puno120 12368937 YP_005788636.1 CDS HPPN120_04895 NC_017378.1 996445 998253 R hypothetical protein complement(996445..998253) Helicobacter pylori Puno120 12368938 YP_005788637.1 CDS HPPN120_04900 NC_017378.1 998250 1001480 R COG1112 Superfamily I DNA and RNA helicases and helicase subunits; hypothetical protein complement(998250..1001480) Helicobacter pylori Puno120 12368939 YP_005788638.1 CDS HPPN120_04905 NC_017378.1 1001474 1002829 R COG0515 Serine/threonine protein kinase; serine/threonine kinase complement(1001474..1002829) Helicobacter pylori Puno120 12368940 YP_005788639.1 CDS HPPN120_04910 NC_017378.1 1002820 1003506 R COG0631 Serine/threonine protein phosphatase; hypothetical protein complement(1002820..1003506) Helicobacter pylori Puno120 12368941 YP_005788640.1 CDS HPPN120_04915 NC_017378.1 1003503 1003826 R hypothetical protein complement(1003503..1003826) Helicobacter pylori Puno120 12368942 YP_005788641.1 CDS HPPN120_04920 NC_017378.1 1003823 1003921 R hypothetical protein complement(1003823..1003921) Helicobacter pylori Puno120 12368943 YP_005788642.1 CDS HPPN120_04925 NC_017378.1 1003921 1004559 R COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain; phage/colicin/tellurite resistance cluster protein TerY complement(1003921..1004559) Helicobacter pylori Puno120 12368944 YP_005788643.1 CDS HPPN120_04930 NC_017378.1 1005889 1007925 D COG3843 Type IV secretory pathway, VirD2 components (relaxase); hypothetical protein 1005889..1007925 Helicobacter pylori Puno120 12368945 YP_005788644.1 CDS HPPN120_04935 NC_017378.1 1008372 1008623 D hypothetical protein 1008372..1008623 Helicobacter pylori Puno120 12368946 YP_005788645.1 CDS HPPN120_04940 NC_017378.1 1008640 1009509 D COG3177 Uncharacterized conserved protein; putative cell division protein 1008640..1009509 Helicobacter pylori Puno120 12368947 YP_005788646.1 CDS HPPN120_04955 NC_017378.1 1016070 1016375 D hypothetical protein 1016070..1016375 Helicobacter pylori Puno120 12368950 YP_005788647.1 CDS HPPN120_04970 NC_017378.1 1018520 1018957 D COG0465 ATP-dependent Zn proteases; hypothetical protein 1018520..1018957 Helicobacter pylori Puno120 12368951 YP_005788648.1 CDS HPPN120_04975 NC_017378.1 1018938 1019438 D hypothetical protein 1018938..1019438 Helicobacter pylori Puno120 12368952 YP_005788649.1 CDS HPPN120_04980 NC_017378.1 1019531 1021378 R COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase complement(1019531..1021378) Helicobacter pylori Puno120 12368953 YP_005788650.1 CDS HPPN120_04985 NC_017378.1 1021393 1022562 R COG0438 Glycosyltransferase; type 1 capsular polysaccharide biosynthesis protein J complement(1021393..1022562) Helicobacter pylori Puno120 12368954 YP_005788651.1 CDS HPPN120_04990 NC_017378.1 1022566 1022994 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(1022566..1022994) Helicobacter pylori Puno120 12368955 YP_005788652.1 CDS HPPN120_05005 NC_017378.1 1023798 1024805 R hypothetical protein complement(1023798..1024805) Helicobacter pylori Puno120 12368956 YP_005788653.1 CDS HPPN120_05020 NC_017378.1 1026927 1028096 D COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acid synthase 1026927..1028096 Helicobacter pylori Puno120 12368957 YP_005788654.1 CDS HPPN120_05025 NC_017378.1 1028099 1029970 R COG0668 Small-conductance mechanosensitive channel; hypothetical protein complement(1028099..1029970) Helicobacter pylori Puno120 12368958 YP_005788655.1 CDS HPPN120_05030 NC_017378.1 1030062 1030178 D hypothetical protein 1030062..1030178 Helicobacter pylori Puno120 12368959 YP_005788656.1 CDS HPPN120_05035 NC_017378.1 1030889 1030990 R hypothetical protein complement(1030889..1030990) Helicobacter pylori Puno120 12368964 YP_005788657.1 CDS HPPN120_05040 NC_017378.1 1031081 1031830 R putative neuraminyllactose-binding hemagglutinin-like protein complement(1031081..1031830) Helicobacter pylori Puno120 12368965 YP_005788658.1 CDS guaA NC_017378.1 1031909 1033435 R COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase complement(1031909..1033435) Helicobacter pylori Puno120 12368966 YP_005788659.1 CDS HPPN120_05050 NC_017378.1 1033446 1033934 R hypothetical protein complement(1033446..1033934) Helicobacter pylori Puno120 12368967 YP_005788660.1 CDS HPPN120_05055 NC_017378.1 1034087 1036477 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; biotin sulfoxide reductase complement(1034087..1036477) Helicobacter pylori Puno120 12368968 YP_005788661.1 CDS HPPN120_05060 NC_017378.1 1036582 1037172 R hypothetical protein complement(1036582..1037172) Helicobacter pylori Puno120 12368969 YP_005788662.1 CDS HPPN120_05065 NC_017378.1 1037198 1038520 R COG0520 Selenocysteine lyase; nifS-like protein complement(1037198..1038520) Helicobacter pylori Puno120 12368970 YP_005788663.1 CDS HPPN120_05070 NC_017378.1 1038539 1038853 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Hit-like protein involved in cell-cycle regulation complement(1038539..1038853) Helicobacter pylori Puno120 12368971 YP_005788664.1 CDS pheS NC_017378.1 1038934 1039920 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1038934..1039920 Helicobacter pylori Puno120 12368972 YP_005788665.1 CDS pheT NC_017378.1 1039920 1042214 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1039920..1042214 Helicobacter pylori Puno120 12368973 YP_005788666.1 CDS HPPN120_05085 NC_017378.1 1042286 1043575 D COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1042286..1043575 Helicobacter pylori Puno120 12368974 YP_005788667.1 CDS ispH NC_017378.1 1043565 1044389 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1043565..1044389 Helicobacter pylori Puno120 12368975 YP_005788668.1 CDS rpsA NC_017378.1 1044510 1046168 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1044510..1046168 Helicobacter pylori Puno120 12368976 YP_005788669.1 CDS HPPN120_05100 NC_017378.1 1046197 1046541 D hypothetical protein 1046197..1046541 Helicobacter pylori Puno120 12368977 YP_005788670.1 CDS HPPN120_05105 NC_017378.1 1046730 1048304 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1046730..1048304 Helicobacter pylori Puno120 12368978 YP_005788671.1 CDS HPPN120_05110 NC_017378.1 1048314 1050164 D COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1048314..1050164 Helicobacter pylori Puno120 12368979 YP_005788672.1 CDS HPPN120_05115 NC_017378.1 1050174 1050842 D COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein 1050174..1050842 Helicobacter pylori Puno120 12368980 YP_005788673.1 CDS HPPN120_05130 NC_017378.1 1051605 1052540 D COG0835 Chemotaxis signal transduction protein; CheA-MCP interaction modulator 1051605..1052540 Helicobacter pylori Puno120 12368981 YP_005788674.1 CDS HPPN120_05135 NC_017378.1 1052598 1055015 D COG0643 Chemotaxis protein histidine kinase and related kinases; auto phosphorylating histidine kinase 1052598..1055015 Helicobacter pylori Puno120 12368982 YP_005788675.1 CDS HPPN120_05140 NC_017378.1 1055012 1055509 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein (cheW) 1055012..1055509 Helicobacter pylori Puno120 12368983 YP_005788676.1 CDS HPPN120_05145 NC_017378.1 1055765 1056265 R COG2077 Peroxiredoxin; adhesin-thiol peroxidase complement(1055765..1056265) Helicobacter pylori Puno120 12368984 YP_005788677.1 CDS HPPN120_05150 NC_017378.1 1056489 1057130 D COG0605 Superoxide dismutase; superoxide dismutase 1056489..1057130 Helicobacter pylori Puno120 12368985 YP_005788678.1 CDS HPPN120_05155 NC_017378.1 1057182 1057901 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1057182..1057901 Helicobacter pylori Puno120 12368986 YP_005788679.1 CDS HPPN120_05170 NC_017378.1 1059773 1060009 R hypothetical protein complement(1059773..1060009) Helicobacter pylori Puno120 12368987 YP_005788680.1 CDS HPPN120_05175 NC_017378.1 1060022 1060249 R COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein complement(1060022..1060249) Helicobacter pylori Puno120 12368988 YP_005788681.1 CDS HPPN120_05180 NC_017378.1 1060452 1061198 D hypothetical protein 1060452..1061198 Helicobacter pylori Puno120 12368989 YP_005788682.1 CDS HPPN120_05185 NC_017378.1 1061206 1061733 R hypothetical protein complement(1061206..1061733) Helicobacter pylori Puno120 12368990 YP_005788683.1 CDS HPPN120_05190 NC_017378.1 1061905 1063128 D COG0501 Zn-dependent protease with chaperone function; putative zinc-metallo protease 1061905..1063128 Helicobacter pylori Puno120 12368991 YP_005788684.1 CDS HPPN120_05195 NC_017378.1 1063125 1063955 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1063125..1063955 Helicobacter pylori Puno120 12368992 YP_005788685.1 CDS HPPN120_05200 NC_017378.1 1064022 1065368 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 1064022..1065368 Helicobacter pylori Puno120 12368993 YP_005788686.1 CDS HPPN120_05205 NC_017378.1 1065383 1066756 R alpha-(1,3)-fucosyltransferase complement(1065383..1066756) Helicobacter pylori Puno120 12368994 YP_005788687.1 CDS HPPN120_05210 NC_017378.1 1066766 1069576 R COG1333 ResB protein required for cytochrome c biosynthesis; cytochrome c-type biogenesis protein complement(1066766..1069576) Helicobacter pylori Puno120 12368995 YP_005788688.1 CDS HPPN120_05215 NC_017378.1 1069586 1070257 R COG2143 Thioredoxin-related protein; hypothetical protein complement(1069586..1070257) Helicobacter pylori Puno120 12368996 YP_005788689.1 CDS hemH NC_017378.1 1070330 1071337 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(1070330..1071337) Helicobacter pylori Puno120 12368997 YP_005788690.1 CDS HPPN120_05225 NC_017378.1 1071393 1071824 D hypothetical protein 1071393..1071824 Helicobacter pylori Puno120 12368998 YP_005788691.1 CDS HPPN120_05230 NC_017378.1 1071825 1072505 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1071825..1072505 Helicobacter pylori Puno120 12368999 YP_005788692.1 CDS HPPN120_05235 NC_017378.1 1072529 1074754 R putative outer membrane protein complement(1072529..1074754) Helicobacter pylori Puno120 12369000 YP_005788693.1 CDS dcd NC_017378.1 1074913 1075479 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(1074913..1075479) Helicobacter pylori Puno120 12369001 YP_005788694.1 CDS HPPN120_05245 NC_017378.1 1075609 1076079 D COG0511 Biotin carboxyl carrier protein; biotin carboxyl carrier protein (fabE) 1075609..1076079 Helicobacter pylori Puno120 12369002 YP_005788695.1 CDS HPPN120_05250 NC_017378.1 1076085 1077452 D COG0439 Biotin carboxylase; biotin carboxylase 1076085..1077452 Helicobacter pylori Puno120 12369003 YP_005788696.1 CDS HPPN120_05255 NC_017378.1 1077545 1078507 D putative type II DNA modification enzyme (methyltransferase) 1077545..1078507 Helicobacter pylori Puno120 12369004 YP_005788697.1 CDS HPPN120_05260 NC_017378.1 1078557 1079054 D hypothetical protein 1078557..1079054 Helicobacter pylori Puno120 12369005 YP_005788698.1 CDS HPPN120_05265 NC_017378.1 1079148 1079747 D hypothetical protein 1079148..1079747 Helicobacter pylori Puno120 12369006 YP_005788699.1 CDS HPPN120_05270 NC_017378.1 1079744 1080871 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; aminotransferase 1079744..1080871 Helicobacter pylori Puno120 12369007 YP_005788700.1 CDS nrdF NC_017378.1 1081191 1082216 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 1081191..1082216 Helicobacter pylori Puno120 12369009 YP_005788701.1 CDS pcm NC_017378.1 1082226 1082855 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1082226..1082855 Helicobacter pylori Puno120 12369010 YP_005788702.1 CDS HPPN120_05285 NC_017378.1 1082866 1083903 D COG0795 Predicted permeases; hypothetical protein 1082866..1083903 Helicobacter pylori Puno120 12369011 YP_005788703.1 CDS truA NC_017378.1 1083904 1084632 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1083904..1084632 Helicobacter pylori Puno120 12369012 YP_005788704.1 CDS HPPN120_05295 NC_017378.1 1084626 1085660 R COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1084626..1085660) Helicobacter pylori Puno120 12369013 YP_005788705.1 CDS HPPN120_05310 NC_017378.1 1086193 1087728 D putative outer membrane protein 1086193..1087728 Helicobacter pylori Puno120 12369016 YP_005788706.1 CDS HPPN120_05315 NC_017378.1 1087749 1088501 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short chain alcohol dehydrogenase 1087749..1088501 Helicobacter pylori Puno120 12369017 YP_005788707.1 CDS HPPN120_05320 NC_017378.1 1088715 1089587 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1088715..1089587) Helicobacter pylori Puno120 12369018 YP_005788708.1 CDS HPPN120_05325 NC_017378.1 1089662 1090282 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase complement(1089662..1090282) Helicobacter pylori Puno120 12369019 YP_005788709.1 CDS HPPN120_05330 NC_017378.1 1090301 1092127 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase complement(1090301..1092127) Helicobacter pylori Puno120 12369020 YP_005788710.1 CDS HPPN120_05335 NC_017378.1 1092193 1093470 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1092193..1093470 Helicobacter pylori Puno120 12369021 YP_005788711.1 CDS HPPN120_05340 NC_017378.1 1093481 1094164 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1093481..1094164 Helicobacter pylori Puno120 12369022 YP_005788712.1 CDS glk NC_017378.1 1094151 1095161 D COG0837 Glucokinase; glucokinase 1094151..1095161 Helicobacter pylori Puno120 12369023 YP_005788713.1 CDS HPPN120_05350 NC_017378.1 1095325 1096371 D COG1064 Zn-dependent alcohol dehydrogenases; alcohol dehydrogenase 1095325..1096371 Helicobacter pylori Puno120 12369024 YP_005788714.1 CDS HPPN120_05355 NC_017378.1 1096383 1097543 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1096383..1097543) Helicobacter pylori Puno120 12369025 YP_005788715.1 CDS HPPN120_05360 NC_017378.1 1097683 1098873 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1097683..1098873) Helicobacter pylori Puno120 12369026 YP_005788716.1 CDS HPPN120_05365 NC_017378.1 1099045 1100352 D hypothetical protein 1099045..1100352 Helicobacter pylori Puno120 12369027 YP_005788717.1 CDS HPPN120_05370 NC_017378.1 1100359 1101030 R outer membrane protein (omp23) complement(1100359..1101030) Helicobacter pylori Puno120 12369028 YP_005788718.1 CDS HPPN120_05375 NC_017378.1 1101124 1101246 R hypothetical protein complement(1101124..1101246) Helicobacter pylori Puno120 12369029 YP_005788719.1 CDS HPPN120_05380 NC_017378.1 1101320 1101880 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate flavodoxin oxidoreductase subunit gamma 1101320..1101880 Helicobacter pylori Puno120 12369030 YP_005788720.1 CDS porD NC_017378.1 1101896 1102288 D COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; pyruvate flavodoxin oxidoreductase subunit delta 1101896..1102288 Helicobacter pylori Puno120 12369031 YP_005788721.1 CDS porA NC_017378.1 1102298 1103521 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin oxidoreductase subunit alpha 1102298..1103521 Helicobacter pylori Puno120 12369032 YP_005788722.1 CDS HPPN120_05395 NC_017378.1 1103534 1104478 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; pyruvate ferredoxin oxidoreductase subunit beta 1103534..1104478 Helicobacter pylori Puno120 12369033 YP_005788723.1 CDS HPPN120_05400 NC_017378.1 1104588 1105910 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1104588..1105910 Helicobacter pylori Puno120 12369034 YP_005788724.1 CDS HPPN120_05405 NC_017378.1 1105979 1106812 D outer membrane protein Horl 1105979..1106812 Helicobacter pylori Puno120 12369035 YP_005788725.1 CDS HPPN120_05410 NC_017378.1 1106809 1108785 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(1106809..1108785) Helicobacter pylori Puno120 12369036 YP_005788726.1 CDS HPPN120_05415 NC_017378.1 1108967 1109914 R hypothetical protein complement(1108967..1109914) Helicobacter pylori Puno120 12369037 YP_005788727.1 CDS HPPN120_05420 NC_017378.1 1109901 1110101 D hypothetical protein 1109901..1110101 Helicobacter pylori Puno120 12369038 YP_005788728.1 CDS HPPN120_05425 NC_017378.1 1110353 1111123 R COG0790 FOG: TPR repeat, SEL1 subfamily; cysteine-rich protein X complement(1110353..1111123) Helicobacter pylori Puno120 12369039 YP_005788729.1 CDS HPPN120_05430 NC_017378.1 1111309 1111401 R hypothetical protein complement(1111309..1111401) Helicobacter pylori Puno120 12369040 YP_005788730.1 CDS HPPN120_05435 NC_017378.1 1111370 1113073 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(1111370..1113073) Helicobacter pylori Puno120 12369041 YP_005788731.1 CDS flgK NC_017378.1 1113272 1115092 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(1113272..1115092) Helicobacter pylori Puno120 12369042 YP_005788732.1 CDS HPPN120_05445 NC_017378.1 1115094 1115528 R hypothetical protein complement(1115094..1115528) Helicobacter pylori Puno120 12369043 YP_005788733.1 CDS HPPN120_05450 NC_017378.1 1115658 1116596 R COG0270 Site-specific DNA methylase; type II DNA modification enzyme (methyltransferase) complement(1115658..1116596) Helicobacter pylori Puno120 12369044 YP_005788734.1 CDS HPPN120_05455 NC_017378.1 1116753 1116956 R flgM protein complement(1116753..1116956) Helicobacter pylori Puno120 12369045 YP_005788735.1 CDS HPPN120_05460 NC_017378.1 1117020 1117226 R hypothetical protein complement(1117020..1117226) Helicobacter pylori Puno120 12369046 YP_005788736.1 CDS HPPN120_05465 NC_017378.1 1117258 1117815 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase slyD complement(1117258..1117815) Helicobacter pylori Puno120 12369047 YP_005788737.1 CDS HPPN120_05470 NC_017378.1 1117802 1118797 R hypothetical protein complement(1117802..1118797) Helicobacter pylori Puno120 12369048 YP_005788738.1 CDS HPPN120_05475 NC_017378.1 1118805 1119344 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(1118805..1119344) Helicobacter pylori Puno120 12369049 YP_005788739.1 CDS tolB NC_017378.1 1119410 1120663 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(1119410..1120663) Helicobacter pylori Puno120 12369050 YP_005788740.1 CDS HPPN120_05485 NC_017378.1 1120660 1121484 R hypothetical protein complement(1120660..1121484) Helicobacter pylori Puno120 12369051 YP_005788741.1 CDS HPPN120_05490 NC_017378.1 1121503 1121904 R COG0848 Biopolymer transport protein; biopolymer transport protein ExbD/TolR complement(1121503..1121904) Helicobacter pylori Puno120 12369052 YP_005788742.1 CDS HPPN120_05495 NC_017378.1 1121957 1122526 R COG0811 Biopolymer transport proteins; biopolymer transport protein complement(1121957..1122526) Helicobacter pylori Puno120 12369053 YP_005788743.1 CDS atpC NC_017378.1 1122537 1122908 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(1122537..1122908) Helicobacter pylori Puno120 12369054 YP_005788744.1 CDS HPPN120_05505 NC_017378.1 1122919 1124319 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(1122919..1124319) Helicobacter pylori Puno120 12369055 YP_005788745.1 CDS HPPN120_05510 NC_017378.1 1124348 1125253 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(1124348..1125253) Helicobacter pylori Puno120 12369056 YP_005788746.1 CDS HPPN120_05515 NC_017378.1 1125268 1126779 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(1125268..1126779) Helicobacter pylori Puno120 12369057 YP_005788747.1 CDS HPPN120_05520 NC_017378.1 1126802 1127344 R F0F1 ATP synthase subunit delta complement(1126802..1127344) Helicobacter pylori Puno120 12369058 YP_005788748.1 CDS HPPN120_05525 NC_017378.1 1127345 1127860 R F0F1 ATP synthase subunit B complement(1127345..1127860) Helicobacter pylori Puno120 12369059 YP_005788749.1 CDS HPPN120_05530 NC_017378.1 1127864 1128298 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B' complement(1127864..1128298) Helicobacter pylori Puno120 12369060 YP_005788750.1 CDS HPPN120_05535 NC_017378.1 1128409 1129281 R COG1475 Predicted transcriptional regulators; plasmid replication-partition related protein complement(1128409..1129281) Helicobacter pylori Puno120 12369061 YP_005788751.1 CDS HPPN120_05540 NC_017378.1 1129284 1130078 R COG1192 ATPases involved in chromosome partitioning; SpoOJ regulator (soj) complement(1129284..1130078) Helicobacter pylori Puno120 12369062 YP_005788752.1 CDS HPPN120_05545 NC_017378.1 1130084 1130722 R COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase complement(1130084..1130722) Helicobacter pylori Puno120 12369063 YP_005788753.1 CDS fmt NC_017378.1 1130719 1131630 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1130719..1131630) Helicobacter pylori Puno120 12369064 YP_005788754.1 CDS HPPN120_05555 NC_017378.1 1131632 1134184 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ATPase complement(1131632..1134184) Helicobacter pylori Puno120 12369065 YP_005788755.1 CDS HPPN120_05560 NC_017378.1 1134275 1135576 R COG4487 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1134275..1135576) Helicobacter pylori Puno120 12369066 YP_005788756.1 CDS HPPN120_05565 NC_017378.1 1136138 1136248 D hypothetical protein 1136138..1136248 Helicobacter pylori Puno120 12369067 YP_005788757.1 CDS HPPN120_05570 NC_017378.1 1138679 1139476 R COG1432 Uncharacterized conserved protein; hypothetical protein complement(1138679..1139476) Helicobacter pylori Puno120 12369069 YP_005788758.1 CDS HPPN120_05575 NC_017378.1 1139618 1139719 D hypothetical protein 1139618..1139719 Helicobacter pylori Puno120 12369070 YP_005788759.1 CDS rplS NC_017378.1 1139747 1140103 R COG0335 Ribosomal protein L19; 50S ribosomal protein L19 complement(1139747..1140103) Helicobacter pylori Puno120 12369071 YP_005788760.1 CDS trmD NC_017378.1 1140125 1140814 R COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(1140125..1140814) Helicobacter pylori Puno120 12369072 YP_005788761.1 CDS rimM NC_017378.1 1140815 1141369 R COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM complement(1140815..1141369) Helicobacter pylori Puno120 12369073 YP_005788762.1 CDS HPPN120_05595 NC_017378.1 1141370 1141717 R COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein complement(1141370..1141717) Helicobacter pylori Puno120 12369074 YP_005788763.1 CDS rpsP NC_017378.1 1141734 1141964 R COG0228 Ribosomal protein S16; 30S ribosomal protein S16 complement(1141734..1141964) Helicobacter pylori Puno120 12369075 YP_005788764.1 CDS HPPN120_05605 NC_017378.1 1142038 1143384 R COG0541 Signal recognition particle GTPase; signal recognition particle protein complement(1142038..1143384) Helicobacter pylori Puno120 12369076 YP_005788765.1 CDS valS NC_017378.1 1143399 1146017 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(1143399..1146017) Helicobacter pylori Puno120 12369077 YP_005788766.1 CDS HPPN120_05615 NC_017378.1 1146154 1146561 D COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1146154..1146561 Helicobacter pylori Puno120 12369078 YP_005788767.1 CDS murG NC_017378.1 1146573 1147634 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1146573..1147634 Helicobacter pylori Puno120 12369079 YP_005788768.1 CDS HPPN120_05625 NC_017378.1 1147646 1147747 R hypothetical protein complement(1147646..1147747) Helicobacter pylori Puno120 12369080 YP_005788769.1 CDS HPPN120_05630 NC_017378.1 1147742 1149832 D outer membrane protein HopI 1147742..1149832 Helicobacter pylori Puno120 12369081 YP_005788770.1 CDS HPPN120_05635 NC_017378.1 1149855 1153544 D outer membrane protein HopL 1149855..1153544 Helicobacter pylori Puno120 12369082 YP_005788771.1 CDS HPPN120_05640 NC_017378.1 1153557 1154330 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1153557..1154330 Helicobacter pylori Puno120 12369083 YP_005788772.1 CDS HPPN120_05645 NC_017378.1 1154358 1154891 D COG2184 Protein involved in cell division; cell filamentation protein 1154358..1154891 Helicobacter pylori Puno120 12369084 YP_005788773.1 CDS HPPN120_05650 NC_017378.1 1154906 1155670 R hypothetical protein complement(1154906..1155670) Helicobacter pylori Puno120 12369085 YP_005788774.1 CDS HPPN120_05655 NC_017378.1 1155682 1156134 R COG4278 Uncharacterized conserved protein; hypothetical protein complement(1155682..1156134) Helicobacter pylori Puno120 12369086 YP_005788775.1 CDS HPPN120_05660 NC_017378.1 1156233 1156661 R COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein complement(1156233..1156661) Helicobacter pylori Puno120 12369087 YP_005788776.1 CDS HPPN120_05665 NC_017378.1 1156714 1157208 R COG0716 Flavodoxins; flavodoxin FldA complement(1156714..1157208) Helicobacter pylori Puno120 12369088 YP_005788777.1 CDS HPPN120_05670 NC_017378.1 1157297 1157878 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(1157297..1157878) Helicobacter pylori Puno120 12369089 YP_005788778.1 CDS HPPN120_05675 NC_017378.1 1158004 1158195 D COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cation transport subunit for cbb3-type oxidase 1158004..1158195 Helicobacter pylori Puno120 12369090 YP_005788779.1 CDS HPPN120_05680 NC_017378.1 1158221 1159189 D COG0492 Thioredoxin reductase; thioredoxin reductase 1158221..1159189 Helicobacter pylori Puno120 12369091 YP_005788780.1 CDS HPPN120_05685 NC_017378.1 1159203 1160363 R COG0477 Permeases of the major facilitator superfamily; tetracycline resistance proteintet A (P ) complement(1159203..1160363) Helicobacter pylori Puno120 12369092 YP_005788781.1 CDS pgi NC_017378.1 1160427 1162064 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1160427..1162064 Helicobacter pylori Puno120 12369093 YP_005788782.1 CDS HPPN120_05695 NC_017378.1 1162372 1163787 D outer membrane protein HofH 1162372..1163787 Helicobacter pylori Puno120 12369094 YP_005788783.1 CDS HPPN120_05700 NC_017378.1 1164054 1166117 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein complement(1164054..1166117) Helicobacter pylori Puno120 12369095 YP_005788784.1 CDS HPPN120_05705 NC_017378.1 1166330 1166983 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1166330..1166983 Helicobacter pylori Puno120 12369096 YP_005788785.1 CDS HPPN120_05710 NC_017378.1 1166986 1167657 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1166986..1167657 Helicobacter pylori Puno120 12369097 YP_005788786.1 CDS HPPN120_05715 NC_017378.1 1167659 1168405 D COG1126 ABC-type polar amino acid transport system, ATPase component; phosphate ABC transporter ATP-binding protein 1167659..1168405 Helicobacter pylori Puno120 12369098 YP_005788787.1 CDS HPPN120_05720 NC_017378.1 1168454 1169287 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter, periplasmic glutamine-binding protein 1168454..1169287 Helicobacter pylori Puno120 12369099 YP_005788788.1 CDS HPPN120_05725 NC_017378.1 1169409 1169960 D hypothetical protein 1169409..1169960 Helicobacter pylori Puno120 12369100 YP_005788789.1 CDS HPPN120_05730 NC_017378.1 1170175 1171398 R COG0738 Fucose permease; glucose/galactose transporter complement(1170175..1171398) Helicobacter pylori Puno120 12369101 YP_005788790.1 CDS HPPN120_05735 NC_017378.1 1171528 1172835 R COG2252 Permeases; hypothetical protein complement(1171528..1172835) Helicobacter pylori Puno120 12369102 YP_005788791.1 CDS HPPN120_05740 NC_017378.1 1173143 1173280 D hypothetical protein 1173143..1173280 Helicobacter pylori Puno120 12369103 YP_005788792.1 CDS HPPN120_05745 NC_017378.1 1173258 1175132 R outer membrane protein (omp27) complement(1173258..1175132) Helicobacter pylori Puno120 12369104 YP_005788793.1 CDS HPPN120_05750 NC_017378.1 1175427 1175519 D hypothetical protein 1175427..1175519 Helicobacter pylori Puno120 12369105 YP_005788794.1 CDS HPPN120_05755 NC_017378.1 1175639 1176340 R COG0813 Purine-nucleoside phosphorylase; purine-nucleoside phosphorylase complement(1175639..1176340) Helicobacter pylori Puno120 12369106 YP_005788795.1 CDS HPPN120_05760 NC_017378.1 1176337 1177578 R COG1015 Phosphopentomutase; phosphopentomutase complement(1176337..1177578) Helicobacter pylori Puno120 12369107 YP_005788796.1 CDS HPPN120_05765 NC_017378.1 1177590 1178846 R COG1972 Nucleoside permease; pyrimidine nucleoside transport protein (nupC) complement(1177590..1178846) Helicobacter pylori Puno120 12369108 YP_005788797.1 CDS HPPN120_05770 NC_017378.1 1179171 1180502 D COG0477 Permeases of the major facilitator superfamily; multidrug-efflux transporter 1179171..1180502 Helicobacter pylori Puno120 12369110 YP_005788798.1 CDS HPPN120_05775 NC_017378.1 1180520 1181281 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 1180520..1181281 Helicobacter pylori Puno120 12369111 YP_005788799.1 CDS HPPN120_05780 NC_017378.1 1181291 1182442 R COG0475 Kef-type K+ transport systems, membrane components; Na+/H+ antiporter complement(1181291..1182442) Helicobacter pylori Puno120 12369112 YP_005788800.1 CDS HPPN120_05785 NC_017378.1 1182468 1183847 R COG0534 Na+-driven multidrug efflux pump; hypothetical protein complement(1182468..1183847) Helicobacter pylori Puno120 12369113 YP_005788801.1 CDS HPPN120_05790 NC_017378.1 1184006 1185181 R COG2814 Arabinose efflux permease; putative arabinose transporter complement(1184006..1185181) Helicobacter pylori Puno120 12369114 YP_005788802.1 CDS HPPN120_05795 NC_017378.1 1185457 1186200 D COG3338 Carbonic anhydrase; alpha-carbonic anhydrase 1185457..1186200 Helicobacter pylori Puno120 12369115 YP_005788803.1 CDS HPPN120_05800 NC_017378.1 1186489 1188231 D hypothetical protein 1186489..1188231 Helicobacter pylori Puno120 12369116 YP_005788804.1 CDS HPPN120_05805 NC_017378.1 1188297 1190069 D hypothetical protein 1188297..1190069 Helicobacter pylori Puno120 12369117 YP_005788805.1 CDS HPPN120_05810 NC_017378.1 1190135 1191940 D COG1757 Na+/H+ antiporter; hypothetical protein 1190135..1191940 Helicobacter pylori Puno120 12369118 YP_005788806.1 CDS HPPN120_05815 NC_017378.1 1192125 1193165 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(1192125..1193165) Helicobacter pylori Puno120 12369119 YP_005788807.1 CDS hisS NC_017378.1 1193152 1194480 R COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(1193152..1194480) Helicobacter pylori Puno120 12369120 YP_005788808.1 CDS HPPN120_05825 NC_017378.1 1194542 1195591 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase II 1194542..1195591 Helicobacter pylori Puno120 12369121 YP_005788809.1 CDS HPPN120_05830 NC_017378.1 1195782 1196216 R hypothetical protein complement(1195782..1196216) Helicobacter pylori Puno120 12369122 YP_005788810.1 CDS HPPN120_05835 NC_017378.1 1196595 1196723 R hypothetical protein complement(1196595..1196723) Helicobacter pylori Puno120 12369123 YP_005788811.1 CDS HPPN120_05840 NC_017378.1 1196761 1198839 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(1196761..1198839) Helicobacter pylori Puno120 12369124 YP_005788812.1 CDS HPPN120_05845 NC_017378.1 1198851 1199318 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(1198851..1199318) Helicobacter pylori Puno120 12369125 YP_005788813.1 CDS rpsL NC_017378.1 1199334 1199741 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(1199334..1199741) Helicobacter pylori Puno120 12369126 YP_005788814.1 CDS HPPN120_05855 NC_017378.1 1199829 1208501 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; bifunctional DNA-directed RNA polymerase subunit beta/beta' complement(1199829..1208501) Helicobacter pylori Puno120 12369127 YP_005788815.1 CDS HPPN120_05860 NC_017378.1 1208495 1208686 D hypothetical protein 1208495..1208686 Helicobacter pylori Puno120 12369128 YP_005788816.1 CDS rplL NC_017378.1 1208725 1209102 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(1208725..1209102) Helicobacter pylori Puno120 12369129 YP_005788817.1 CDS rplJ NC_017378.1 1209148 1209642 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(1209148..1209642) Helicobacter pylori Puno120 12369130 YP_005788818.1 CDS rplA NC_017378.1 1209751 1210455 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(1209751..1210455) Helicobacter pylori Puno120 12369131 YP_005788819.1 CDS rplK NC_017378.1 1210500 1210925 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(1210500..1210925) Helicobacter pylori Puno120 12369132 YP_005788820.1 CDS nusG NC_017378.1 1210943 1211470 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(1210943..1211470) Helicobacter pylori Puno120 12369133 YP_005788821.1 CDS secE NC_017378.1 1211500 1211679 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(1211500..1211679) Helicobacter pylori Puno120 12369134 YP_005788822.1 CDS rpmG NC_017378.1 1211937 1212095 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(1211937..1212095) Helicobacter pylori Puno120 12369136 YP_005788823.1 CDS HPPN120_05900 NC_017378.1 1212129 1213328 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(1212129..1213328) Helicobacter pylori Puno120 12369137 YP_005788824.1 CDS HPPN120_05905 NC_017378.1 1214032 1215768 D COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC-transporter, ATP-binding domain 1214032..1215768 Helicobacter pylori Puno120 12369142 YP_005788825.1 CDS HPPN120_05910 NC_017378.1 1215777 1216445 R COG0546 Predicted phosphatases; hypothetical protein complement(1215777..1216445) Helicobacter pylori Puno120 12369143 YP_005788826.1 CDS HPPN120_05915 NC_017378.1 1216548 1217537 R COG3392 Adenine-specific DNA methylase; Site-specific DNA-methyltransferase complement(1216548..1217537) Helicobacter pylori Puno120 12369144 YP_005788827.1 CDS HPPN120_05920 NC_017378.1 1217865 1218020 R hypothetical protein complement(1217865..1218020) Helicobacter pylori Puno120 12369145 YP_005788828.1 CDS HPPN120_05925 NC_017378.1 1218265 1218780 R COG1045 Serine acetyltransferase; serine acetyltransferase complement(1218265..1218780) Helicobacter pylori Puno120 12369146 YP_005788829.1 CDS HPPN120_05930 NC_017378.1 1218821 1218940 R hypothetical protein complement(1218821..1218940) Helicobacter pylori Puno120 12369148 YP_005788830.1 CDS HPPN120_05935 NC_017378.1 1219447 1219764 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(1219447..1219764) Helicobacter pylori Puno120 12369154 YP_005788831.1 CDS HPPN120_05940 NC_017378.1 1219901 1221967 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(1219901..1221967) Helicobacter pylori Puno120 12369155 YP_005788832.1 CDS HPPN120_05945 NC_017378.1 1221970 1222674 R COG1926 Predicted phosphoribosyltransferases; hypothetical protein complement(1221970..1222674) Helicobacter pylori Puno120 12369156 YP_005788833.1 CDS HPPN120_05950 NC_017378.1 1222689 1224950 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(1222689..1224950) Helicobacter pylori Puno120 12369157 YP_005788834.1 CDS HPPN120_05955 NC_017378.1 1224953 1225432 R hypothetical protein complement(1224953..1225432) Helicobacter pylori Puno120 12369158 YP_005788835.1 CDS HPPN120_05960 NC_017378.1 1225474 1226748 R COG0151 Phosphoribosylamine-glycine ligase; glycinamide ribonucleotide synthetase complement(1225474..1226748) Helicobacter pylori Puno120 12369159 YP_005788836.1 CDS HPPN120_05965 NC_017378.1 1227060 1227746 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1227060..1227746) Helicobacter pylori Puno120 12369160 YP_005788837.1 CDS HPPN120_05970 NC_017378.1 1227740 1228444 R COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase complement(1227740..1228444) Helicobacter pylori Puno120 12369162 YP_005788838.1 CDS HPPN120_05975 NC_017378.1 1228485 1231325 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(1228485..1231325) Helicobacter pylori Puno120 12369164 YP_005788839.1 CDS HPPN120_05980 NC_017378.1 1231397 1231744 D COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 1231397..1231744 Helicobacter pylori Puno120 12369165 YP_005788840.1 CDS hemD NC_017378.1 1231747 1232418 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 1231747..1232418 Helicobacter pylori Puno120 12369166 YP_005788841.1 CDS HPPN120_05990 NC_017378.1 1232475 1232867 D COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 1232475..1232867 Helicobacter pylori Puno120 12369167 YP_005788842.1 CDS HPPN120_05995 NC_017378.1 1232912 1233949 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(1232912..1233949) Helicobacter pylori Puno120 12369168 YP_005788843.1 CDS HPPN120_06000 NC_017378.1 1234045 1234335 D COG2863 Cytochrome c553; cytochrome c-553 1234045..1234335 Helicobacter pylori Puno120 12369169 YP_005788844.1 CDS HPPN120_06005 NC_017378.1 1234328 1234420 R hypothetical protein complement(1234328..1234420) Helicobacter pylori Puno120 12369170 YP_005788845.1 CDS HPPN120_06010 NC_017378.1 1234496 1234969 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 1234496..1234969 Helicobacter pylori Puno120 12369171 YP_005788846.1 CDS HPPN120_06015 NC_017378.1 1234963 1236180 D COG0527 Aspartokinases; aspartate kinase 1234963..1236180 Helicobacter pylori Puno120 12369172 YP_005788847.1 CDS HPPN120_06020 NC_017378.1 1236177 1236719 D hypothetical protein 1236177..1236719 Helicobacter pylori Puno120 12369173 YP_005788848.1 CDS HPPN120_06025 NC_017378.1 1236716 1237372 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1236716..1237372 Helicobacter pylori Puno120 12369174 YP_005788849.1 CDS HPPN120_06030 NC_017378.1 1237369 1238511 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1237369..1238511 Helicobacter pylori Puno120 12369175 YP_005788850.1 CDS HPPN120_06035 NC_017378.1 1238535 1238996 R hypothetical protein complement(1238535..1238996) Helicobacter pylori Puno120 12369176 YP_005788851.1 CDS HPPN120_06040 NC_017378.1 1239219 1239344 D hypothetical protein 1239219..1239344 Helicobacter pylori Puno120 12369177 YP_005788852.1 CDS HPPN120_06045 NC_017378.1 1239394 1240290 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 1239394..1240290 Helicobacter pylori Puno120 12369178 YP_005788853.1 CDS HPPN120_06050 NC_017378.1 1240294 1241541 D hypothetical protein 1240294..1241541 Helicobacter pylori Puno120 12369179 YP_005788854.1 CDS HPPN120_06055 NC_017378.1 1241620 1242171 D COG2952 Uncharacterized protein conserved in bacteria; hypothetical protein 1241620..1242171 Helicobacter pylori Puno120 12369180 YP_005788855.1 CDS HPPN120_06060 NC_017378.1 1242171 1243298 D COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 1242171..1243298 Helicobacter pylori Puno120 12369181 YP_005788856.1 CDS amiF NC_017378.1 1243465 1244469 D COG0388 Predicted amidohydrolase; formamidase 1243465..1244469 Helicobacter pylori Puno120 12369182 YP_005788857.1 CDS HPPN120_06070 NC_017378.1 1244542 1244844 R hypothetical protein complement(1244542..1244844) Helicobacter pylori Puno120 12369183 YP_005788858.1 CDS HPPN120_06075 NC_017378.1 1245172 1245744 R COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein complement(1245172..1245744) Helicobacter pylori Puno120 12369184 YP_005788859.1 CDS HPPN120_06090 NC_017378.1 1248409 1248639 D COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein 1248409..1248639 Helicobacter pylori Puno120 12369185 YP_005788860.1 CDS HPPN120_06095 NC_017378.1 1248873 1249007 D hypothetical protein 1248873..1249007 Helicobacter pylori Puno120 12369186 YP_005788861.1 CDS HPPN120_06100 NC_017378.1 1249184 1251235 R outer membrane protein (omp19) complement(1249184..1251235) Helicobacter pylori Puno120 12369187 YP_005788862.1 CDS HPPN120_06105 NC_017378.1 1251343 1251516 R hypothetical protein complement(1251343..1251516) Helicobacter pylori Puno120 12369188 YP_005788863.1 CDS rpsR NC_017378.1 1251543 1251800 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(1251543..1251800) Helicobacter pylori Puno120 12369189 YP_005788864.1 CDS HPPN120_06115 NC_017378.1 1251824 1252369 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(1251824..1252369) Helicobacter pylori Puno120 12369190 YP_005788865.1 CDS rpsF NC_017378.1 1252379 1252807 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(1252379..1252807) Helicobacter pylori Puno120 12369191 YP_005788866.1 CDS HPPN120_06125 NC_017378.1 1252804 1252953 R hypothetical protein complement(1252804..1252953) Helicobacter pylori Puno120 12369192 YP_005788867.1 CDS HPPN120_06130 NC_017378.1 1252950 1253972 R DNA polymerase III subunit delta complement(1252950..1253972) Helicobacter pylori Puno120 12369193 YP_005788868.1 CDS HPPN120_06135 NC_017378.1 1253962 1255896 R COG0557 Exoribonuclease R; ribonuclease R complement(1253962..1255896) Helicobacter pylori Puno120 12369194 YP_005788869.1 CDS aroE NC_017378.1 1255896 1256687 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1255896..1256687) Helicobacter pylori Puno120 12369195 YP_005788870.1 CDS HPPN120_06145 NC_017378.1 1256695 1257273 R hypothetical protein complement(1256695..1257273) Helicobacter pylori Puno120 12369196 YP_005788871.1 CDS HPPN120_06150 NC_017378.1 1257294 1258340 R COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide ABC transporter permease complement(1257294..1258340) Helicobacter pylori Puno120 12369197 YP_005788872.1 CDS HPPN120_06155 NC_017378.1 1258337 1260118 R COG4166 ABC-type oligopeptide transport system, periplasmic component; hypothetical protein complement(1258337..1260118) Helicobacter pylori Puno120 12369198 YP_005788873.1 CDS HPPN120_06160 NC_017378.1 1260119 1261099 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1260119..1261099) Helicobacter pylori Puno120 12369199 YP_005788874.1 CDS HPPN120_06165 NC_017378.1 1261170 1261892 R COG0500 SAM-dependent methyltransferases; biotin synthase complement(1261170..1261892) Helicobacter pylori Puno120 12369200 YP_005788875.1 CDS secG NC_017378.1 1262015 1262614 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1262015..1262614 Helicobacter pylori Puno120 12369201 YP_005788876.1 CDS frr NC_017378.1 1262614 1263171 D COG0233 Ribosome recycling factor; ribosome recycling factor 1262614..1263171 Helicobacter pylori Puno120 12369202 YP_005788877.1 CDS pyrE NC_017378.1 1263175 1263780 D COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1263175..1263780 Helicobacter pylori Puno120 12369203 YP_005788878.1 CDS HPPN120_06185 NC_017378.1 1263770 1264234 D COG1714 Predicted membrane protein/domain; hypothetical protein 1263770..1264234 Helicobacter pylori Puno120 12369204 YP_005788879.1 CDS HPPN120_06190 NC_017378.1 1264231 1264920 D COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 1264231..1264920 Helicobacter pylori Puno120 12369205 YP_005788880.1 CDS HPPN120_06195 NC_017378.1 1265023 1265424 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1265023..1265424 Helicobacter pylori Puno120 12369206 YP_005788881.1 CDS HPPN120_06200 NC_017378.1 1265424 1265903 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1265424..1265903 Helicobacter pylori Puno120 12369207 YP_005788882.1 CDS HPPN120_06205 NC_017378.1 1265903 1266700 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C 1265903..1266700 Helicobacter pylori Puno120 12369208 YP_005788883.1 CDS HPPN120_06210 NC_017378.1 1266702 1267931 D COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D 1266702..1267931 Helicobacter pylori Puno120 12369209 YP_005788884.1 CDS HPPN120_06215 NC_017378.1 1267928 1268158 D NADH dehydrogenase I subunit E 1267928..1268158 Helicobacter pylori Puno120 12369210 YP_005788885.1 CDS HPPN120_06220 NC_017378.1 1268161 1269147 D NADH-ubiquinone oxidoreductase subunit F 1268161..1269147 Helicobacter pylori Puno120 12369211 YP_005788886.1 CDS HPPN120_06225 NC_017378.1 1269144 1271678 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1269144..1271678 Helicobacter pylori Puno120 12369212 YP_005788887.1 CDS HPPN120_06230 NC_017378.1 1271675 1272664 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 1271675..1272664 Helicobacter pylori Puno120 12369213 YP_005788888.1 CDS HPPN120_06235 NC_017378.1 1272675 1273337 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1272675..1273337 Helicobacter pylori Puno120 12369214 YP_005788889.1 CDS HPPN120_06240 NC_017378.1 1273330 1273878 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 1273330..1273878 Helicobacter pylori Puno120 12369215 YP_005788890.1 CDS HPPN120_06245 NC_017378.1 1273875 1274177 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 1273875..1274177 Helicobacter pylori Puno120 12369216 YP_005788891.1 CDS HPPN120_06250 NC_017378.1 1274180 1276018 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 1274180..1276018 Helicobacter pylori Puno120 12369217 YP_005788892.1 CDS HPPN120_06255 NC_017378.1 1276022 1277560 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 1276022..1277560 Helicobacter pylori Puno120 12369218 YP_005788893.1 CDS HPPN120_06260 NC_017378.1 1277547 1279025 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 1277547..1279025 Helicobacter pylori Puno120 12369219 YP_005788894.1 CDS HPPN120_06265 NC_017378.1 1279015 1281426 D COG1729 Uncharacterized protein conserved in bacteria; paralysed flagella protein 1279015..1281426 Helicobacter pylori Puno120 12369220 YP_005788895.1 CDS HPPN120_06270 NC_017378.1 1281428 1282804 D COG1109 Phosphomannomutase; phosphomannomutase 1281428..1282804 Helicobacter pylori Puno120 12369221 YP_005788896.1 CDS HPPN120_06275 NC_017378.1 1282915 1283265 D hypothetical protein 1282915..1283265 Helicobacter pylori Puno120 12369222 YP_005788897.1 CDS trpA NC_017378.1 1283495 1284283 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1283495..1284283) Helicobacter pylori Puno120 12369223 YP_005788898.1 CDS HPPN120_06285 NC_017378.1 1284280 1285461 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(1284280..1285461) Helicobacter pylori Puno120 12369224 YP_005788899.1 CDS HPPN120_06290 NC_017378.1 1285463 1286821 R COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1285463..1286821) Helicobacter pylori Puno120 12369225 YP_005788900.1 CDS trpD NC_017378.1 1286814 1287821 R COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(1286814..1287821) Helicobacter pylori Puno120 12369226 YP_005788901.1 CDS HPPN120_06300 NC_017378.1 1287818 1288402 R COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II complement(1287818..1288402) Helicobacter pylori Puno120 12369227 YP_005788902.1 CDS HPPN120_06305 NC_017378.1 1288399 1289901 R COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(1288399..1289901) Helicobacter pylori Puno120 12369228 YP_005788903.1 CDS HPPN120_06310 NC_017378.1 1290134 1291192 R COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein complement(1290134..1291192) Helicobacter pylori Puno120 12369229 YP_005788904.1 CDS HPPN120_06315 NC_017378.1 1291259 1291951 R COG2503 Predicted secreted acid phosphatase; acid phosphatase lipoprotein complement(1291259..1291951) Helicobacter pylori Puno120 12369230 YP_005788905.1 CDS HPPN120_06320 NC_017378.1 1292121 1292669 D COG2353 Uncharacterized conserved protein; hypothetical protein 1292121..1292669 Helicobacter pylori Puno120 12369231 YP_005788906.1 CDS HPPN120_06325 NC_017378.1 1292663 1292779 R hypothetical protein complement(1292663..1292779) Helicobacter pylori Puno120 12369232 YP_005788907.1 CDS HPPN120_06330 NC_017378.1 1293255 1293911 D COG0819 Putative transcription activator; putative transcriptional regulator 1293255..1293911 Helicobacter pylori Puno120 12369233 YP_005788908.1 CDS HPPN120_06335 NC_017378.1 1294033 1294695 D COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter 1294033..1294695 Helicobacter pylori Puno120 12369234 YP_005788909.1 CDS HPPN120_06340 NC_017378.1 1294683 1295297 D COG1564 Thiamine pyrophosphokinase; thiamine pyrophosphokinase 1294683..1295297 Helicobacter pylori Puno120 12369235 YP_005788910.1 CDS HPPN120_06345 NC_017378.1 1295607 1295759 D hypothetical protein 1295607..1295759 Helicobacter pylori Puno120 12369236 YP_005788911.1 CDS rplQ NC_017378.1 1295803 1296153 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(1295803..1296153) Helicobacter pylori Puno120 12369237 YP_005788912.1 CDS HPPN120_06355 NC_017378.1 1296153 1297187 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(1296153..1297187) Helicobacter pylori Puno120 12369238 YP_005788913.1 CDS rpsD NC_017378.1 1297199 1297825 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(1297199..1297825) Helicobacter pylori Puno120 12369239 YP_005788914.1 CDS HPPN120_06365 NC_017378.1 1297835 1298230 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(1297835..1298230) Helicobacter pylori Puno120 12369240 YP_005788915.1 CDS rpsM NC_017378.1 1298253 1298615 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(1298253..1298615) Helicobacter pylori Puno120 12369241 YP_005788916.1 CDS HPPN120_06375 NC_017378.1 1298619 1298732 R COG0257 Ribosomal protein L36; hypothetical protein complement(1298619..1298732) Helicobacter pylori Puno120 12369242 YP_005788917.1 CDS infA NC_017378.1 1298811 1299029 R COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(1298811..1299029) Helicobacter pylori Puno120 12369243 YP_005788918.1 CDS HPPN120_06385 NC_017378.1 1299029 1299790 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1299029..1299790) Helicobacter pylori Puno120 12369244 YP_005788919.1 CDS secY NC_017378.1 1299790 1301052 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(1299790..1301052) Helicobacter pylori Puno120 12369245 YP_005788920.1 CDS rplO NC_017378.1 1301090 1301491 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(1301090..1301491) Helicobacter pylori Puno120 12369246 YP_005788921.1 CDS rpsE NC_017378.1 1301509 1301952 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(1301509..1301952) Helicobacter pylori Puno120 12369247 YP_005788922.1 CDS rplR NC_017378.1 1301967 1302323 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(1301967..1302323) Helicobacter pylori Puno120 12369248 YP_005788923.1 CDS rplF NC_017378.1 1302337 1302873 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(1302337..1302873) Helicobacter pylori Puno120 12369249 YP_005788924.1 CDS rpsH NC_017378.1 1302884 1303279 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(1302884..1303279) Helicobacter pylori Puno120 12369250 YP_005788925.1 CDS rpsN NC_017378.1 1303289 1303474 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(1303289..1303474) Helicobacter pylori Puno120 12369251 YP_005788926.1 CDS rplE NC_017378.1 1303484 1304029 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(1303484..1304029) Helicobacter pylori Puno120 12369252 YP_005788927.1 CDS rplX NC_017378.1 1304042 1304263 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(1304042..1304263) Helicobacter pylori Puno120 12369253 YP_005788928.1 CDS rplN NC_017378.1 1304263 1304631 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(1304263..1304631) Helicobacter pylori Puno120 12369254 YP_005788929.1 CDS rpsQ NC_017378.1 1304634 1304894 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(1304634..1304894) Helicobacter pylori Puno120 12369255 YP_005788930.1 CDS HPPN120_06445 NC_017378.1 1304908 1305108 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(1304908..1305108) Helicobacter pylori Puno120 12369256 YP_005788931.1 CDS rplP NC_017378.1 1305095 1305520 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(1305095..1305520) Helicobacter pylori Puno120 12369257 YP_005788932.1 CDS rpsC NC_017378.1 1305523 1306227 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(1305523..1306227) Helicobacter pylori Puno120 12369258 YP_005788933.1 CDS rplV NC_017378.1 1306231 1306599 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(1306231..1306599) Helicobacter pylori Puno120 12369259 YP_005788934.1 CDS rpsS NC_017378.1 1306609 1306890 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(1306609..1306890) Helicobacter pylori Puno120 12369260 YP_005788935.1 CDS rplB NC_017378.1 1306902 1307732 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(1306902..1307732) Helicobacter pylori Puno120 12369261 YP_005788936.1 CDS rplW NC_017378.1 1307748 1308029 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(1307748..1308029) Helicobacter pylori Puno120 12369262 YP_005788937.1 CDS rplD NC_017378.1 1308033 1308680 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(1308033..1308680) Helicobacter pylori Puno120 12369263 YP_005788938.1 CDS rplC NC_017378.1 1308715 1309290 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(1308715..1309290) Helicobacter pylori Puno120 12369264 YP_005788939.1 CDS rpsJ NC_017378.1 1309327 1309641 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(1309327..1309641) Helicobacter pylori Puno120 12369265 YP_005788940.1 CDS HPPN120_06495 NC_017378.1 1309851 1310939 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; ATP-binding protein 1309851..1310939 Helicobacter pylori Puno120 12369266 YP_005788941.1 CDS HPPN120_06500 NC_017378.1 1311308 1311886 D hypothetical protein 1311308..1311886 Helicobacter pylori Puno120 12369267 YP_005788942.1 CDS rnhB NC_017378.1 1311860 1312474 R COG0164 Ribonuclease HII; ribonuclease HII complement(1311860..1312474) Helicobacter pylori Puno120 12369268 YP_005788943.1 CDS HPPN120_06510 NC_017378.1 1312471 1315113 R COG0542 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein complement(1312471..1315113) Helicobacter pylori Puno120 12369269 YP_005788944.1 CDS fumC NC_017378.1 1315117 1316508 R COG0114 Fumarase; fumarate hydratase complement(1315117..1316508) Helicobacter pylori Puno120 12369270 YP_005788945.1 CDS HPPN120_06520 NC_017378.1 1316684 1317061 D hypothetical protein 1316684..1317061 Helicobacter pylori Puno120 12369271 YP_005788946.1 CDS HPPN120_06525 NC_017378.1 1317066 1318304 D hypothetical protein 1317066..1318304 Helicobacter pylori Puno120 12369272 YP_005788947.1 CDS HPPN120_06530 NC_017378.1 1318301 1319308 D COG0845 Membrane-fusion protein; cation efflux system protein (czcA) 1318301..1319308 Helicobacter pylori Puno120 12369273 YP_005788948.1 CDS HPPN120_06535 NC_017378.1 1319309 1322422 D COG3696 Putative silver efflux pump; cation efflux system protein (czcA) 1319309..1322422 Helicobacter pylori Puno120 12369274 YP_005788949.1 CDS HPPN120_06540 NC_017378.1 1322419 1322766 R COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance); hypothetical protein complement(1322419..1322766) Helicobacter pylori Puno120 12369275 YP_005788950.1 CDS HPPN120_06545 NC_017378.1 1322760 1323446 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); branched-chain amino acid transport protein complement(1322760..1323446) Helicobacter pylori Puno120 12369276 YP_005788951.1 CDS HPPN120_06550 NC_017378.1 1323457 1324566 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(1323457..1324566) Helicobacter pylori Puno120 12369277 YP_005788952.1 CDS HPPN120_06555 NC_017378.1 1324689 1325819 D hypothetical protein 1324689..1325819 Helicobacter pylori Puno120 12369278 YP_005788953.1 CDS mnmA NC_017378.1 1325862 1326890 R COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA complement(1325862..1326890) Helicobacter pylori Puno120 12369279 YP_005788954.1 CDS HPPN120_06565 NC_017378.1 1327031 1327792 D COG2214 DnaJ-class molecular chaperone; hypothetical protein 1327031..1327792 Helicobacter pylori Puno120 12369280 YP_005788955.1 CDS HPPN120_06570 NC_017378.1 1327789 1328304 R COG1057 Nicotinic acid mononucleotide adenylyltransferase; putative nicotinate-nucleotide adenylyltransferase complement(1327789..1328304) Helicobacter pylori Puno120 12369281 YP_005788956.1 CDS HPPN120_06575 NC_017378.1 1328297 1328743 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator complement(1328297..1328743) Helicobacter pylori Puno120 12369282 YP_005788957.1 CDS HPPN120_06580 NC_017378.1 1329080 1329517 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1329080..1329517 Helicobacter pylori Puno120 12369283 YP_005788958.1 CDS HPPN120_06585 NC_017378.1 1329514 1329903 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 1329514..1329903 Helicobacter pylori Puno120 12369284 YP_005788959.1 CDS HPPN120_06590 NC_017378.1 1329869 1330726 D COG0810 Periplasmic protein TonB, links inner and outer membranes; siderophore-mediated iron transport protein 1329869..1330726 Helicobacter pylori Puno120 12369285 YP_005788960.1 CDS HPPN120_06605 NC_017378.1 1331423 1332151 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(1331423..1332151) Helicobacter pylori Puno120 12369286 YP_005788961.1 CDS HPPN120_06610 NC_017378.1 1332158 1333120 R COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein complement(1332158..1333120) Helicobacter pylori Puno120 12369287 YP_005788962.1 CDS pgk NC_017378.1 1333136 1334344 R COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase complement(1333136..1334344) Helicobacter pylori Puno120 12369288 YP_005788963.1 CDS HPPN120_06620 NC_017378.1 1334359 1335351 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1334359..1335351) Helicobacter pylori Puno120 12369289 YP_005788964.1 CDS HPPN120_06625 NC_017378.1 1335440 1336141 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(1335440..1336141) Helicobacter pylori Puno120 12369290 YP_005788965.1 CDS HPPN120_06630 NC_017378.1 1336138 1336860 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1336138..1336860) Helicobacter pylori Puno120 12369291 YP_005788966.1 CDS HPPN120_06635 NC_017378.1 1336847 1338010 R hypothetical protein complement(1336847..1338010) Helicobacter pylori Puno120 12369292 YP_005788967.1 CDS HPPN120_06640 NC_017378.1 1338017 1339381 R COG0793 Periplasmic protease; protease complement(1338017..1339381) Helicobacter pylori Puno120 12369293 YP_005788968.1 CDS HPPN120_06645 NC_017378.1 1339492 1339725 R adenine specific DNA methyltransferase complement(1339492..1339725) Helicobacter pylori Puno120 12369294 YP_005788969.1 CDS HPPN120_06650 NC_017378.1 1339790 1340683 R hypothetical protein complement(1339790..1340683) Helicobacter pylori Puno120 12369295 YP_005788970.1 CDS HPPN120_06655 NC_017378.1 1340683 1341762 R COG0863 DNA modification methylase; adenine specific DNA methyltransferase (HINFIM) complement(1340683..1341762) Helicobacter pylori Puno120 12369296 YP_005788971.1 CDS HPPN120_06660 NC_017378.1 1342012 1345467 R COG4889 Predicted helicase; adenine specific DNA methyltransferase complement(1342012..1345467) Helicobacter pylori Puno120 12369297 YP_005788972.1 CDS HPPN120_06665 NC_017378.1 1345493 1346314 R COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(1345493..1346314) Helicobacter pylori Puno120 12369298 YP_005788973.1 CDS HPPN120_06670 NC_017378.1 1346314 1347324 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1346314..1347324) Helicobacter pylori Puno120 12369299 YP_005788974.1 CDS HPPN120_06675 NC_017378.1 1347314 1348117 R COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase complement(1347314..1348117) Helicobacter pylori Puno120 12369300 YP_005788975.1 CDS HPPN120_06680 NC_017378.1 1348111 1348617 R hypothetical protein complement(1348111..1348617) Helicobacter pylori Puno120 12369301 YP_005788976.1 CDS HPPN120_06685 NC_017378.1 1348630 1349124 R hypothetical protein complement(1348630..1349124) Helicobacter pylori Puno120 12369302 YP_005788977.1 CDS ubiA NC_017378.1 1349117 1350001 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase complement(1349117..1350001) Helicobacter pylori Puno120 12369303 YP_005788978.1 CDS HPPN120_06695 NC_017378.1 1350030 1351343 R COG0658 Predicted membrane metal-binding protein; competence locus E complement(1350030..1351343) Helicobacter pylori Puno120 12369304 YP_005788979.1 CDS HPPN120_06700 NC_017378.1 1351340 1352800 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(1351340..1352800) Helicobacter pylori Puno120 12369305 YP_005788980.1 CDS HPPN120_06705 NC_017378.1 1352811 1354205 R COG0062 Uncharacterized conserved protein; hypothetical protein complement(1352811..1354205) Helicobacter pylori Puno120 12369306 YP_005788981.1 CDS HPPN120_06710 NC_017378.1 1354208 1355341 R COG0642 Signal transduction histidine kinase; signal-transducing protein, histidine kinase complement(1354208..1355341) Helicobacter pylori Puno120 12369307 YP_005788982.1 CDS HPPN120_06715 NC_017378.1 1355376 1356017 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator complement(1355376..1356017) Helicobacter pylori Puno120 12369308 YP_005788983.1 CDS HPPN120_06720 NC_017378.1 1356105 1357088 R MBOIIR; type IIS restriction enzyme R protein complement(1356105..1357088) Helicobacter pylori Puno120 12369309 YP_005788984.1 CDS HPPN120_06725 NC_017378.1 1357152 1357985 R COG0863 DNA modification methylase; type IIS restriction enzyme M1 protein (mod) complement(1357152..1357985) Helicobacter pylori Puno120 12369310 YP_005788985.1 CDS HPPN120_06730 NC_017378.1 1357972 1358247 R COG0863 DNA modification methylase; modification methylase mjai complement(1357972..1358247) Helicobacter pylori Puno120 12369311 YP_005788986.1 CDS HPPN120_06735 NC_017378.1 1358425 1359267 D type II restriction endonuclease 1358425..1359267 Helicobacter pylori Puno120 12369312 YP_005788987.1 CDS HPPN120_06740 NC_017378.1 1359270 1360160 D COG0338 Site-specific DNA methylase; DNA adenine methylase 1359270..1360160 Helicobacter pylori Puno120 12369313 YP_005788988.1 CDS HPPN120_06745 NC_017378.1 1360132 1361547 D COG2189 Adenine specific DNA methylase Mod; Adenine-specific DNA methylase 1360132..1361547 Helicobacter pylori Puno120 12369314 YP_005788989.1 CDS HPPN120_06750 NC_017378.1 1361531 1362604 D COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA methylase 1361531..1362604 Helicobacter pylori Puno120 12369315 YP_005788990.1 CDS HPPN120_06755 NC_017378.1 1362614 1365526 D COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type III restriction enzyme R protein 1362614..1365526 Helicobacter pylori Puno120 12369316 YP_005788991.1 CDS HPPN120_06760 NC_017378.1 1365577 1366323 R COG1792 Cell shape-determining protein; rod shape-determining protein MreC complement(1365577..1366323) Helicobacter pylori Puno120 12369317 YP_005788992.1 CDS HPPN120_06765 NC_017378.1 1366327 1367370 R COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB complement(1366327..1367370) Helicobacter pylori Puno120 12369318 YP_005788993.1 CDS clpX NC_017378.1 1367413 1368759 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1367413..1368759) Helicobacter pylori Puno120 12369319 YP_005788994.1 CDS HPPN120_06775 NC_017378.1 1368761 1369573 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(1368761..1369573) Helicobacter pylori Puno120 12369320 YP_005788995.1 CDS fabZ NC_017378.1 1369576 1370055 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(1369576..1370055) Helicobacter pylori Puno120 12369321 YP_005788996.1 CDS HPPN120_06785 NC_017378.1 1370237 1370626 R COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW complement(1370237..1370626) Helicobacter pylori Puno120 12369322 YP_005788997.1 CDS HPPN120_06790 NC_017378.1 1370842 1370991 D hypothetical protein 1370842..1370991 Helicobacter pylori Puno120 12369323 YP_005788998.1 CDS HPPN120_06795 NC_017378.1 1371034 1371696 D COG4105 DNA uptake lipoprotein; putative lipoprotein 1371034..1371696 Helicobacter pylori Puno120 12369324 YP_005788999.1 CDS HPPN120_06800 NC_017378.1 1371737 1374235 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 1371737..1374235 Helicobacter pylori Puno120 12369325 YP_005789000.1 CDS HPPN120_06805 NC_017378.1 1374244 1375071 D COG0287 Prephenate dehydrogenase; prephenate dehydrogenase 1374244..1375071 Helicobacter pylori Puno120 12369326 YP_005789001.1 CDS HPPN120_06810 NC_017378.1 1375402 1376265 R COG1864 DNA/RNA endonuclease G, NUC1; DNA/RNA endonuclease G (nucG) complement(1375402..1376265) Helicobacter pylori Puno120 12369327 YP_005789002.1 CDS HPPN120_06815 NC_017378.1 1376390 1378108 R COG2189 Adenine specific DNA methylase Mod; putative type III restriction enzyme M protein complement(1376390..1378108) Helicobacter pylori Puno120 12369328 YP_005789003.1 CDS HPPN120_06820 NC_017378.1 1378102 1380441 R COG3421 Uncharacterized protein conserved in bacteria; putative type III restriction enzyme R protein complement(1378102..1380441) Helicobacter pylori Puno120 12369329 YP_005789004.1 CDS HPPN120_06825 NC_017378.1 1380853 1381701 D COG0502 Biotin synthase and related enzymes; biotin synthase 1380853..1381701 Helicobacter pylori Puno120 12369330 YP_005789005.1 CDS HPPN120_06830 NC_017378.1 1381701 1382567 D COG1295 Predicted membrane protein; putative ribonuclease N 1381701..1382567 Helicobacter pylori Puno120 12369331 YP_005789006.1 CDS HPPN120_06835 NC_017378.1 1382553 1382690 R hypothetical protein complement(1382553..1382690) Helicobacter pylori Puno120 12369332 YP_005789007.1 CDS HPPN120_06840 NC_017378.1 1382816 1383319 R hypothetical protein complement(1382816..1383319) Helicobacter pylori Puno120 12369333 YP_005789008.1 CDS HPPN120_06845 NC_017378.1 1383358 1383471 R hypothetical protein complement(1383358..1383471) Helicobacter pylori Puno120 12369334 YP_005789009.1 CDS HPPN120_06850 NC_017378.1 1387801 1388106 D hypothetical protein 1387801..1388106 Helicobacter pylori Puno120 12369337 YP_005789010.1 CDS HPPN120_06875 NC_017378.1 1391263 1391703 R COG0780 Enzyme related to GTP cyclohydrolase I; 7-cyano-7-deazaguanine reductase complement(1391263..1391703) Helicobacter pylori Puno120 12369338 YP_005789011.1 CDS HPPN120_06880 NC_017378.1 1391762 1392103 D COG0799 Uncharacterized homolog of plant Iojap protein; iojap-like protein 1391762..1392103 Helicobacter pylori Puno120 12369339 YP_005789012.1 CDS miaA NC_017378.1 1392174 1393004 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1392174..1393004 Helicobacter pylori Puno120 12369340 YP_005789013.1 CDS HPPN120_06890 NC_017378.1 1393009 1394112 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase 1393009..1394112 Helicobacter pylori Puno120 12369341 YP_005789014.1 CDS murB NC_017378.1 1395836 1396615 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1395836..1396615) Helicobacter pylori Puno120 12369342 YP_005789015.1 CDS fliQ NC_017378.1 1396619 1396870 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(1396619..1396870) Helicobacter pylori Puno120 12369343 YP_005789016.1 CDS fliI NC_017378.1 1396896 1398200 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(1396896..1398200) Helicobacter pylori Puno120 12369345 YP_005789017.1 CDS HPPN120_06925 NC_017378.1 1398201 1399115 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; type IV secretion system ATPase complement(1398201..1399115) Helicobacter pylori Puno120 12369347 YP_005789018.1 CDS ileS NC_017378.1 1399131 1401893 R COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1399131..1401893) Helicobacter pylori Puno120 12369348 YP_005789019.1 CDS HPPN120_06935 NC_017378.1 1401928 1402185 R COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); hypothetical protein complement(1401928..1402185) Helicobacter pylori Puno120 12369349 YP_005789020.1 CDS HPPN120_06940 NC_017378.1 1402287 1402907 D hypothetical protein 1402287..1402907 Helicobacter pylori Puno120 12369350 YP_005789021.1 CDS HPPN120_06945 NC_017378.1 1402976 1403383 R hypothetical protein complement(1402976..1403383) Helicobacter pylori Puno120 12369351 YP_005789022.1 CDS HPPN120_06950 NC_017378.1 1403570 1404643 R COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N complement(1403570..1404643) Helicobacter pylori Puno120 12369352 YP_005789023.1 CDS HPPN120_06955 NC_017378.1 1404640 1405629 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; polysialic acid capsule expression protein (kpsF) complement(1404640..1405629) Helicobacter pylori Puno120 12369353 YP_005789024.1 CDS HPPN120_06960 NC_017378.1 1405613 1407697 R COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; ATP-binding protein complement(1405613..1407697) Helicobacter pylori Puno120 12369354 YP_005789025.1 CDS ksgA NC_017378.1 1407731 1408546 R COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase complement(1407731..1408546) Helicobacter pylori Puno120 12369355 YP_005789026.1 CDS HPPN120_06970 NC_017378.1 1408635 1408763 R hypothetical protein complement(1408635..1408763) Helicobacter pylori Puno120 12369356 YP_005789027.1 CDS HPPN120_06975 NC_017378.1 1408855 1409046 D hypothetical protein 1408855..1409046 Helicobacter pylori Puno120 12369357 YP_005789028.1 CDS HPPN120_06980 NC_017378.1 1409277 1409432 R cagY like protein complement(1409277..1409432) Helicobacter pylori Puno120 12369358 YP_005789029.1 CDS HPPN120_06985 NC_017378.1 1409502 1410065 R COG0732 Restriction endonuclease S subunits; typeI R-M system specificity subunit complement(1409502..1410065) Helicobacter pylori Puno120 12369359 YP_005789030.1 CDS HPPN120_06990 NC_017378.1 1410066 1410947 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase complement(1410066..1410947) Helicobacter pylori Puno120 12369360 YP_005789031.1 CDS HPPN120_06995 NC_017378.1 1410950 1411828 R COG0616 Periplasmic serine proteases (ClpP class); signal peptide protease IV complement(1410950..1411828) Helicobacter pylori Puno120 12369361 YP_005789032.1 CDS HPPN120_07000 NC_017378.1 1411899 1412159 D hypothetical protein 1411899..1412159 Helicobacter pylori Puno120 12369362 YP_005789033.1 CDS HPPN120_07005 NC_017378.1 1412359 1413066 D hypothetical protein 1412359..1413066 Helicobacter pylori Puno120 12369363 YP_005789034.1 CDS HPPN120_07010 NC_017378.1 1413075 1413623 D hypothetical protein 1413075..1413623 Helicobacter pylori Puno120 12369364 YP_005789035.1 CDS HPPN120_07015 NC_017378.1 1413634 1414074 D hypothetical protein 1413634..1414074 Helicobacter pylori Puno120 12369365 YP_005789036.1 CDS HPPN120_07020 NC_017378.1 1414258 1414488 D hypothetical protein 1414258..1414488 Helicobacter pylori Puno120 12369366 YP_005789037.1 CDS HPPN120_07025 NC_017378.1 1414592 1414726 R hypothetical protein complement(1414592..1414726) Helicobacter pylori Puno120 12369367 YP_005789038.1 CDS HPPN120_07030 NC_017378.1 1417099 1417878 R hypothetical protein complement(1417099..1417878) Helicobacter pylori Puno120 12369369 YP_005789039.1 CDS HPPN120_07035 NC_017378.1 1418002 1418490 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolylcis-transisomeraseB, cyclosporin- type rotamase 1418002..1418490 Helicobacter pylori Puno120 12369370 YP_005789040.1 CDS HPPN120_07040 NC_017378.1 1418508 1418738 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 1418508..1418738 Helicobacter pylori Puno120 12369371 YP_005789041.1 CDS HPPN120_07045 NC_017378.1 1418738 1419541 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1418738..1419541 Helicobacter pylori Puno120 12369372 YP_005789042.1 CDS smpB NC_017378.1 1419538 1419996 D COG0691 tmRNA-binding protein; SsrA-binding protein 1419538..1419996 Helicobacter pylori Puno120 12369373 YP_005789043.1 CDS HPPN120_07055 NC_017378.1 1419999 1420451 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1419999..1420451 Helicobacter pylori Puno120 12369374 YP_005789044.1 CDS HPPN120_07060 NC_017378.1 1420462 1420863 D COG0848 Biopolymer transport protein; biopolymer transport protein 1420462..1420863 Helicobacter pylori Puno120 12369375 YP_005789045.1 CDS rpmH NC_017378.1 1420935 1421069 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 1420935..1421069 Helicobacter pylori Puno120 12369376 YP_005789046.1 CDS HPPN120_07070 NC_017378.1 1421029 1421514 D COG0594 RNase P protein component; ribonuclease P protein component 1421029..1421514 Helicobacter pylori Puno120 12369378 YP_005789047.1 CDS HPPN120_07075 NC_017378.1 1421501 1421854 D COG0759 Uncharacterized conserved protein; hypothetical protein 1421501..1421854 Helicobacter pylori Puno120 12369379 YP_005789048.1 CDS HPPN120_07080 NC_017378.1 1421860 1423500 D COG0706 Preprotein translocase subunit YidC; membrane protein insertase 1421860..1423500 Helicobacter pylori Puno120 12369380 YP_005789049.1 CDS HPPN120_07085 NC_017378.1 1423500 1424294 D COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain; hypothetical protein 1423500..1424294 Helicobacter pylori Puno120 12369381 YP_005789050.1 CDS trmE NC_017378.1 1424287 1425639 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1424287..1425639 Helicobacter pylori Puno120 12369382 YP_005789051.1 CDS HPPN120_07095 NC_017378.1 1425845 1428079 D putative Outer membrane protein 1425845..1428079 Helicobacter pylori Puno120 12369383 YP_005789052.1 CDS HPPN120_07100 NC_017378.1 1428057 1428218 R hypothetical protein complement(1428057..1428218) Helicobacter pylori Puno120 12369384 YP_005789053.1 CDS HPPN120_07105 NC_017378.1 1428593 1429504 R hypothetical protein complement(1428593..1429504) Helicobacter pylori Puno120 12369385 YP_005789054.1 CDS HPPN120_07110 NC_017378.1 1429514 1429855 R COG0481 Membrane GTPase LepA; hypothetical protein complement(1429514..1429855) Helicobacter pylori Puno120 12369386 YP_005789055.1 CDS HPPN120_07115 NC_017378.1 1429863 1430390 R membrane-associated lipoprotein complement(1429863..1430390) Helicobacter pylori Puno120 12369387 YP_005789056.1 CDS HPPN120_07120 NC_017378.1 1430414 1431046 R collagen-binding surface adhesin SpaP complement(1430414..1431046) Helicobacter pylori Puno120 12369388 YP_005789057.1 CDS HPPN120_07125 NC_017378.1 1431410 1431724 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(1431410..1431724) Helicobacter pylori Puno120 12369389 YP_005789058.1 CDS HPPN120_07130 NC_017378.1 1431779 1432552 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; hypothetical protein complement(1431779..1432552) Helicobacter pylori Puno120 12369390 YP_005789059.1 CDS dnaE NC_017378.1 1432549 1436184 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1432549..1436184) Helicobacter pylori Puno120 12369391 YP_005789060.1 CDS HPPN120_07140 NC_017378.1 1436332 1437384 D COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 1436332..1437384 Helicobacter pylori Puno120 12369392 YP_005789061.1 CDS HPPN120_07145 NC_017378.1 1437560 1438147 R COG3187 Heat shock protein; putative secreted motility protein complement(1437560..1438147) Helicobacter pylori Puno120 12369393 YP_005789062.1 CDS HPPN120_07150 NC_017378.1 1438166 1438843 R hypothetical protein complement(1438166..1438843) Helicobacter pylori Puno120 12369394 YP_005789063.1 CDS HPPN120_07155 NC_017378.1 1438846 1439661 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transport system substrate binding protein complement(1438846..1439661) Helicobacter pylori Puno120 12369395 YP_005789064.1 CDS HPPN120_07160 NC_017378.1 1439646 1440431 R COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein complement(1439646..1440431) Helicobacter pylori Puno120 12369396 YP_005789065.1 CDS HPPN120_07175 NC_017378.1 1441697 1442392 D outer membrane protein 1441697..1442392 Helicobacter pylori Puno120 12369397 YP_005789066.1 CDS HPPN120_07180 NC_017378.1 1442397 1443419 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(1442397..1443419) Helicobacter pylori Puno120 12369398 YP_005789067.1 CDS HPPN120_07185 NC_017378.1 1443470 1444216 R outer membrane protein (omp31) complement(1443470..1444216) Helicobacter pylori Puno120 12369399 YP_005789068.1 CDS HPPN120_07190 NC_017378.1 1444331 1447012 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I complement(1444331..1447012) Helicobacter pylori Puno120 12369400 YP_005789069.1 CDS HPPN120_07195 NC_017378.1 1447076 1447693 R type II restriction enzyme complement(1447076..1447693) Helicobacter pylori Puno120 12369401 YP_005789070.1 CDS HPPN120_07200 NC_017378.1 1447656 1448279 R type II restriction modification enzyme methyltransferase complement(1447656..1448279) Helicobacter pylori Puno120 12369402 YP_005789071.1 CDS HPPN120_07205 NC_017378.1 1448276 1450312 R COG0286 Type I restriction-modification system methyltransferase subunit; type IIS restriction enzyme M protein (mod) complement(1448276..1450312) Helicobacter pylori Puno120 12369403 YP_005789072.1 CDS HPPN120_07210 NC_017378.1 1450345 1450920 R competence protein ComFC complement(1450345..1450920) Helicobacter pylori Puno120 12369404 YP_005789073.1 CDS tmk NC_017378.1 1450908 1451483 R COG0125 Thymidylate kinase; thymidylate kinase complement(1450908..1451483) Helicobacter pylori Puno120 12369405 YP_005789074.1 CDS coaD NC_017378.1 1451485 1451958 R COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(1451485..1451958) Helicobacter pylori Puno120 12369406 YP_005789075.1 CDS HPPN120_07225 NC_017378.1 1451958 1452521 R COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1451958..1452521) Helicobacter pylori Puno120 12369407 YP_005789076.1 CDS HPPN120_07230 NC_017378.1 1452502 1452606 D hypothetical protein 1452502..1452606 Helicobacter pylori Puno120 12369408 YP_005789077.1 CDS flgA NC_017378.1 1452531 1453187 R COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA complement(1452531..1453187) Helicobacter pylori Puno120 12369409 YP_005789078.1 CDS HPPN120_07240 NC_017378.1 1453184 1455229 R COG0210 Superfamily I DNA and RNA helicases; DNA helicase II complement(1453184..1455229) Helicobacter pylori Puno120 12369410 YP_005789079.1 CDS HPPN120_07245 NC_017378.1 1455229 1457769 R COG0457 FOG: TPR repeat; hypothetical protein complement(1455229..1457769) Helicobacter pylori Puno120 12369411 YP_005789080.1 CDS HPPN120_07250 NC_017378.1 1457779 1459026 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(1457779..1459026) Helicobacter pylori Puno120 12369412 YP_005789081.1 CDS HPPN120_07255 NC_017378.1 1459027 1459824 R COG0388 Predicted amidohydrolase; hypothetical protein complement(1459027..1459824) Helicobacter pylori Puno120 12369413 YP_005789082.1 CDS HPPN120_07260 NC_017378.1 1459828 1460088 R COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(1459828..1460088) Helicobacter pylori Puno120 12369414 YP_005789083.1 CDS ubiE NC_017378.1 1460098 1460838 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(1460098..1460838) Helicobacter pylori Puno120 12369415 YP_005789084.1 CDS HPPN120_07270 NC_017378.1 1460865 1461311 R COG1981 Predicted membrane protein; hypothetical protein complement(1460865..1461311) Helicobacter pylori Puno120 12369416 YP_005789085.1 CDS HPPN120_07275 NC_017378.1 1461322 1461894 R COG1739 Uncharacterized conserved protein; X-Pro dipeptidase complement(1461322..1461894) Helicobacter pylori Puno120 12369417 YP_005789086.1 CDS HPPN120_07280 NC_017378.1 1461881 1463011 R COG0842 ABC-type multidrug transport system, permease component; antibiotic transport system permease complement(1461881..1463011) Helicobacter pylori Puno120 12369418 YP_005789087.1 CDS HPPN120_07285 NC_017378.1 1463008 1464105 R COG0842 ABC-type multidrug transport system, permease component; hypothetical protein complement(1463008..1464105) Helicobacter pylori Puno120 12369419 YP_005789088.1 CDS HPPN120_07290 NC_017378.1 1464117 1465106 R COG0845 Membrane-fusion protein; secreted protein complement(1464117..1465106) Helicobacter pylori Puno120 12369420 YP_005789089.1 CDS HPPN120_07295 NC_017378.1 1465118 1466650 R COG1538 Outer membrane protein; lipase-like protein complement(1465118..1466650) Helicobacter pylori Puno120 12369421 YP_005789090.1 CDS HPPN120_07300 NC_017378.1 1466647 1467996 R COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein complement(1466647..1467996) Helicobacter pylori Puno120 12369422 YP_005789091.1 CDS HPPN120_07305 NC_017378.1 1468095 1469696 R COG0306 Phosphate/sulphate permeases; phosphate permease complement(1468095..1469696) Helicobacter pylori Puno120 12369423 YP_005789092.1 CDS HPPN120_07310 NC_017378.1 1469837 1470106 D COG0694 Thioredoxin-like proteins and domains; NifU 1469837..1470106 Helicobacter pylori Puno120 12369424 YP_005789093.1 CDS HPPN120_07315 NC_017378.1 1470118 1470729 D hypothetical protein 1470118..1470729 Helicobacter pylori Puno120 12369425 YP_005789094.1 CDS murE NC_017378.1 1470733 1472076 D COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1470733..1472076 Helicobacter pylori Puno120 12369426 YP_005789095.1 CDS HPPN120_07325 NC_017378.1 1472080 1473030 D COG0176 Transaldolase; transaldolase 1472080..1473030 Helicobacter pylori Puno120 12369427 YP_005789096.1 CDS HPPN120_07330 NC_017378.1 1473085 1473621 D COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 1473085..1473621 Helicobacter pylori Puno120 12369428 YP_005789097.1 CDS HPPN120_07335 NC_017378.1 1473632 1474192 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1473632..1474192 Helicobacter pylori Puno120 12369429 YP_005789098.1 CDS HPPN120_07340 NC_017378.1 1474247 1475314 D COG0795 Predicted permeases; hypothetical protein 1474247..1475314 Helicobacter pylori Puno120 12369430 YP_005789099.1 CDS HPPN120_07345 NC_017378.1 1475371 1476372 D COG3392 Adenine-specific DNA methylase; type II methylase 1475371..1476372 Helicobacter pylori Puno120 12369431 YP_005789100.1 CDS HPPN120_07350 NC_017378.1 1476369 1477268 D COG0338 Site-specific DNA methylase; type II adenine specific DNA methyltransferase 1476369..1477268 Helicobacter pylori Puno120 12369432 YP_005789101.1 CDS HPPN120_07355 NC_017378.1 1477275 1478840 D COG0051 Ribosomal protein S10; restriction endonuclease 1477275..1478840 Helicobacter pylori Puno120 12369433 YP_005789102.1 CDS HPPN120_07360 NC_017378.1 1478933 1480099 R outer membrane protein HopK complement(1478933..1480099) Helicobacter pylori Puno120 12369434 YP_005789103.1 CDS HPPN120_07365 NC_017378.1 1480065 1480172 R hypothetical protein complement(1480065..1480172) Helicobacter pylori Puno120 12369435 YP_005789104.1 CDS HPPN120_07370 NC_017378.1 1480279 1480716 D COG3399 Uncharacterized protein conserved in bacteria; hypothetical protein 1480279..1480716 Helicobacter pylori Puno120 12369436 YP_005789105.1 CDS HPPN120_07375 NC_017378.1 1480713 1483064 R COG2217 Cation transport ATPase; putative cation transporting P-type ATPase complement(1480713..1483064) Helicobacter pylori Puno120 12369437 YP_005789106.1 CDS HPPN120_07380 NC_017378.1 1483090 1483806 R COG4123 Predicted O-methyltransferase; hypothetical protein complement(1483090..1483806) Helicobacter pylori Puno120 12369438 YP_005789107.1 CDS HPPN120_07385 NC_017378.1 1483788 1484822 R COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein (ribG) complement(1483788..1484822) Helicobacter pylori Puno120 12369439 YP_005789108.1 CDS HPPN120_07390 NC_017378.1 1484819 1486045 R COG0786 Na+/glutamate symporter; glutamate permease complement(1484819..1486045) Helicobacter pylori Puno120 12369440 YP_005789109.1 CDS HPPN120_07395 NC_017378.1 1486131 1487330 D COG1748 Saccharopine dehydrogenase and related proteins; saccharopine dehydrogenase 1486131..1487330 Helicobacter pylori Puno120 12369441 YP_005789110.1 CDS HPPN120_07400 NC_017378.1 1487340 1488716 R COG0348 Polyferredoxin; ferrodoxin-like protein complement(1487340..1488716) Helicobacter pylori Puno120 12369442 YP_005789111.1 CDS HPPN120_07405 NC_017378.1 1488696 1489484 D COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1488696..1489484 Helicobacter pylori Puno120 12369443 YP_005789112.1 CDS HPPN120_07410 NC_017378.1 1489481 1489834 D COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 1489481..1489834 Helicobacter pylori Puno120 12369444 YP_005789113.1 CDS HPPN120_07415 NC_017378.1 1489818 1490144 D FrpB-like protein 1489818..1490144 Helicobacter pylori Puno120 12369445 YP_005789114.1 CDS HPPN120_07420 NC_017378.1 1490298 1492889 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 1490298..1492889 Helicobacter pylori Puno120 12369446 YP_005789115.1 CDS HPPN120_07425 NC_017378.1 1493117 1494277 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1493117..1494277 Helicobacter pylori Puno120 12369447 YP_005789116.1 CDS nusA NC_017378.1 1494359 1495546 D COG0195 Transcription elongation factor; transcription elongation factor NusA 1494359..1495546 Helicobacter pylori Puno120 12369448 YP_005789117.1 CDS HPPN120_07435 NC_017378.1 1495679 1495774 D hypothetical protein 1495679..1495774 Helicobacter pylori Puno120 12369449 YP_005789118.1 CDS HPPN120_07440 NC_017378.1 1495805 1496533 R hypothetical protein complement(1495805..1496533) Helicobacter pylori Puno120 12369450 YP_005789119.1 CDS HPPN120_07445 NC_017378.1 1496523 1496960 R COG3600 Uncharacterized phage-associated protein; phage-associated protein complement(1496523..1496960) Helicobacter pylori Puno120 12369451 YP_005789120.1 CDS HPPN120_07450 NC_017378.1 1497185 1498804 R COG3344 Retron-type reverse transcriptase; hypothetical protein complement(1497185..1498804) Helicobacter pylori Puno120 12369452 YP_005789121.1 CDS HPPN120_07455 NC_017378.1 1498821 1499345 R hypothetical protein complement(1498821..1499345) Helicobacter pylori Puno120 12369453 YP_005789122.1 CDS HPPN120_07460 NC_017378.1 1499346 1502912 R COG1002 Type II restriction enzyme, methylase subunits; type II S restriction-modification protein complement(1499346..1502912) Helicobacter pylori Puno120 12369454 YP_005789123.1 CDS HPPN120_07465 NC_017378.1 1503018 1505936 R COG3587 Restriction endonuclease; type III restriction enzyme complement(1503018..1505936) Helicobacter pylori Puno120 12369455 YP_005789124.1 CDS HPPN120_07470 NC_017378.1 1505939 1506520 R COG2189 Adenine specific DNA methylase Mod; type III DNA modification enzyme (methyltransferase) complement(1505939..1506520) Helicobacter pylori Puno120 12369456 YP_005789125.1 CDS HPPN120_07475 NC_017378.1 1507844 1509715 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(1507844..1509715) Helicobacter pylori Puno120 12369457 YP_005789126.1 CDS HPPN120_07480 NC_017378.1 1509797 1510150 D hypothetical protein 1509797..1510150 Helicobacter pylori Puno120 12369458 YP_005789127.1 CDS HPPN120_07485 NC_017378.1 1510154 1510789 D hypothetical protein 1510154..1510789 Helicobacter pylori Puno120 12369459 YP_005789128.1 CDS HPPN120_07490 NC_017378.1 1510786 1511538 R COG0708 Exonuclease III; exodeoxyribonuclease III complement(1510786..1511538) Helicobacter pylori Puno120 12369460 YP_005789129.1 CDS HPPN120_07495 NC_017378.1 1511717 1513156 R periplasmic competence protein complement(1511717..1513156) Helicobacter pylori Puno120 12369462 YP_005789130.1 CDS dnaA NC_017378.1 1513421 1514788 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(1513421..1514788) Helicobacter pylori Puno120 12369463 YP_005789131.1 CDS HPPN120_07505 NC_017378.1 1514942 1515478 D COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase 1514942..1515478 Helicobacter pylori Puno120 12369464 YP_005789132.1 CDS HPPN120_07510 NC_017378.1 1515525 1515764 D hypothetical protein 1515525..1515764 Helicobacter pylori Puno120 12369465 YP_005789133.1 CDS HPPN120_07515 NC_017378.1 1515765 1517558 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 1515765..1517558 Helicobacter pylori Puno120 12369466 YP_005789134.1 CDS thyX NC_017378.1 1517580 1518206 D COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 1517580..1518206 Helicobacter pylori Puno120 12369467 YP_005789135.1 CDS HPPN120_07525 NC_017378.1 1518238 1518315 R cagY like protein complement(1518238..1518315) Helicobacter pylori Puno120 12369468 YP_005789136.1 CDS HPPN120_07530 NC_017378.1 1518356 1518448 D hypothetical protein 1518356..1518448 Helicobacter pylori Puno120 12369469 YP_005789137.1 CDS HPPN120_07535 NC_017378.1 1518529 1519680 R COG0732 Restriction endonuclease S subunits; restriction modification system DNA specificity subunit complement(1518529..1519680) Helicobacter pylori Puno120 12369470 YP_005789138.1 CDS HPPN120_07540 NC_017378.1 1519677 1520444 R hypothetical protein complement(1519677..1520444) Helicobacter pylori Puno120 12369471 YP_005789139.1 CDS HPPN120_07555 NC_017378.1 1523050 1524126 D COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; typeI restriction enzyme R protein 1523050..1524126 Helicobacter pylori Puno120 12369472 YP_005789140.1 CDS HPPN120_07560 NC_017378.1 1524769 1525569 D hypothetical protein 1524769..1525569 Helicobacter pylori Puno120 12369473 YP_005789141.1 CDS HPPN120_07565 NC_017378.1 1526278 1532109 D COG0827 Adenine-specific DNA methylase; hypothetical protein 1526278..1532109 Helicobacter pylori Puno120 12369474 YP_005789142.1 CDS HPPN120_07570 NC_017378.1 1532106 1532204 D hypothetical protein 1532106..1532204 Helicobacter pylori Puno120 12369475 YP_005789143.1 CDS HPPN120_07575 NC_017378.1 1532272 1532490 D hypothetical protein 1532272..1532490 Helicobacter pylori Puno120 12369476 YP_005789144.1 CDS HPPN120_07580 NC_017378.1 1532480 1534543 D COG0550 Topoisomerase IA; topoisomerase I 1532480..1534543 Helicobacter pylori Puno120 12369477 YP_005789145.1 CDS HPPN120_07585 NC_017378.1 1534598 1535068 D hypothetical protein 1534598..1535068 Helicobacter pylori Puno120 12369478 YP_005789146.1 CDS HPPN120_07590 NC_017378.1 1535038 1535829 D hypothetical protein 1535038..1535829 Helicobacter pylori Puno120 12369479 YP_005789147.1 CDS HPPN120_07595 NC_017378.1 1535931 1536569 R hypothetical protein complement(1535931..1536569) Helicobacter pylori Puno120 12369480 YP_005789148.1 CDS HPPN120_07600 NC_017378.1 1536547 1536939 R hypothetical protein complement(1536547..1536939) Helicobacter pylori Puno120 12369481 YP_005789149.1 CDS HPPN120_07605 NC_017378.1 1536980 1537648 R COG1192 ATPases involved in chromosome partitioning; hypothetical protein complement(1536980..1537648) Helicobacter pylori Puno120 12369482 YP_005789150.1 CDS HPPN120_07610 NC_017378.1 1538397 1538567 D hypothetical protein 1538397..1538567 Helicobacter pylori Puno120 12369483 YP_005789151.1 CDS HPPN120_07615 NC_017378.1 1538564 1539628 D hypothetical protein 1538564..1539628 Helicobacter pylori Puno120 12369484 YP_005789152.1 CDS HPPN120_07620 NC_017378.1 1539628 1541148 D hypothetical protein 1539628..1541148 Helicobacter pylori Puno120 12369485 YP_005789153.1 CDS HPPN120_07625 NC_017378.1 1541159 1542592 D hypothetical protein 1541159..1542592 Helicobacter pylori Puno120 12369486 YP_005789154.1 CDS HPPN120_07630 NC_017378.1 1542589 1543854 D hypothetical protein 1542589..1543854 Helicobacter pylori Puno120 12369487 YP_005789155.1 CDS HPPN120_07635 NC_017378.1 1543851 1545137 D hypothetical protein 1543851..1545137 Helicobacter pylori Puno120 12369488 YP_005789156.1 CDS HPPN120_07640 NC_017378.1 1545143 1546132 R hypothetical protein complement(1545143..1546132) Helicobacter pylori Puno120 12369489 YP_005789157.1 CDS HPPN120_07645 NC_017378.1 1546365 1547345 D hypothetical protein 1546365..1547345 Helicobacter pylori Puno120 12369490 YP_005789158.1 CDS HPPN120_07650 NC_017378.1 1547515 1548198 D hypothetical protein 1547515..1548198 Helicobacter pylori Puno120 12369491 YP_005789159.1 CDS HPPN120_07655 NC_017378.1 1548321 1549091 D COG3177 Uncharacterized conserved protein; hypothetical protein 1548321..1549091 Helicobacter pylori Puno120 12369492 YP_005789160.1 CDS HPPN120_07670 NC_017378.1 1550605 1552494 D COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein (hsdR) 1550605..1552494 Helicobacter pylori Puno120 12369493 YP_005789161.1 CDS HPPN120_07675 NC_017378.1 1552494 1553201 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 1552494..1553201 Helicobacter pylori Puno120 12369494 YP_005789162.1 CDS HPPN120_07680 NC_017378.1 1553291 1555816 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron(III) dicitrate transport protein (fecA) complement(1553291..1555816) Helicobacter pylori Puno120 12369495 YP_005789163.1 CDS HPPN120_07685 NC_017378.1 1556381 1557322 R COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; arginase complement(1556381..1557322) Helicobacter pylori Puno120 12369496 YP_005789164.1 CDS HPPN120_07690 NC_017378.1 1557335 1558762 R COG0833 Amino acid transporters; amino acid permease complement(1557335..1558762) Helicobacter pylori Puno120 12369497 YP_005789165.1 CDS HPPN120_07695 NC_017378.1 1558956 1560098 D COG0686 Alanine dehydrogenase; alanine dehydrogenase 1558956..1560098 Helicobacter pylori Puno120 12369498 YP_005789166.1 CDS HPPN120_07710 NC_017378.1 1561931 1562659 R putative outer membrane protein complement(1561931..1562659) Helicobacter pylori Puno120 12369499 YP_005789167.1 CDS HPPN120_07715 NC_017378.1 1562843 1563697 D COG0061 Predicted sugar kinase; putative inorganic polyphosphate/ATP-NAD kinase 1562843..1563697 Helicobacter pylori Puno120 12369500 YP_005789168.1 CDS HPPN120_07720 NC_017378.1 1563710 1565284 D COG0497 ATPase involved in DNA repair; DNA repair protein 1563710..1565284 Helicobacter pylori Puno120 12369501 YP_005789169.1 CDS HPPN120_07725 NC_017378.1 1565281 1566588 D COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; fibronectin/fibrinogen-binding protein 1565281..1566588 Helicobacter pylori Puno120 12369502 YP_005789170.1 CDS HPPN120_07730 NC_017378.1 1566607 1566903 D hypothetical protein 1566607..1566903 Helicobacter pylori Puno120 12369503 YP_005789171.1 CDS HPPN120_07735 NC_017378.1 1567241 1567570 D hypothetical protein 1567241..1567570 Helicobacter pylori Puno120 12369504 YP_005789172.1 CDS HPPN120_07740 NC_017378.1 1567676 1567816 D hypothetical protein 1567676..1567816 Helicobacter pylori Puno120 12369505 YP_005789173.1 CDS HPPN120_07745 NC_017378.1 1567842 1568705 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(1567842..1568705) Helicobacter pylori Puno120 12369506 YP_005789174.1 CDS HPPN120_07750 NC_017378.1 1568683 1569336 R COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase complement(1568683..1569336) Helicobacter pylori Puno120 12369507 YP_005789175.1 CDS HPPN120_07755 NC_017378.1 1569407 1570279 D COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 1569407..1570279 Helicobacter pylori Puno120 12369508 YP_005789176.1 CDS HPPN120_07760 NC_017378.1 1570279 1570482 D hypothetical protein 1570279..1570482 Helicobacter pylori Puno120 12369509 YP_005789177.1 CDS HPPN120_07765 NC_017378.1 1570495 1571391 D COG0232 dGTP triphosphohydrolase; putative type II methylase protein 1570495..1571391 Helicobacter pylori Puno120 12369510 YP_005789178.1 CDS HPPN120_07770 NC_017378.1 1571384 1572115 D hypothetical protein 1571384..1572115 Helicobacter pylori Puno120 12369511 YP_005789179.1 CDS HPPN120_07775 NC_017378.1 1572304 1573560 R COG0270 Site-specific DNA methylase; site-specific DNA-methyltransferase complement(1572304..1573560) Helicobacter pylori Puno120 12369512 YP_005789180.1 CDS HPPN120_07780 NC_017378.1 1573550 1574566 R hypothetical protein complement(1573550..1574566) Helicobacter pylori Puno120 12369513 YP_005789181.1 CDS tsf NC_017378.1 1574703 1575770 R COG0264 Translation elongation factor Ts; elongation factor Ts complement(1574703..1575770) Helicobacter pylori Puno120 12369514 YP_005789182.1 CDS rpsB NC_017378.1 1575770 1576564 R COG0052 Ribosomal protein S2; 30S ribosomal protein S2 complement(1575770..1576564) Helicobacter pylori Puno120 12369515 YP_005789183.1 CDS HPPN120_07795 NC_017378.1 1576655 1576741 D hypothetical protein 1576655..1576741 Helicobacter pylori Puno120 12369516 YP_005789184.1 CDS HPPN120_07800 NC_017378.1 1576813 1579629 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); putative recombination protein RecB 1576813..1579629 Helicobacter pylori Puno120 12369517 YP_005789185.1 CDS nhaA NC_017378.1 1579652 1580968 D COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 1579652..1580968 Helicobacter pylori Puno120 12369518 YP_005789186.1 CDS yajC NC_017378.1 1581016 1581309 D COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 1581016..1581309 Helicobacter pylori Puno120 12369519 YP_005789187.1 CDS secD NC_017378.1 1581309 1582886 D COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 1581309..1582886 Helicobacter pylori Puno120 12369520 YP_005789188.1 CDS secF NC_017378.1 1582895 1583866 D COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 1582895..1583866 Helicobacter pylori Puno120 12369521 YP_005789189.1 CDS HPPN120_07825 NC_017378.1 1583876 1584214 D integral membrane protein 1583876..1584214 Helicobacter pylori Puno120 12369522 YP_005789190.1 CDS leuS NC_017378.1 1584224 1586644 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 1584224..1586644 Helicobacter pylori Puno120 12369523 YP_005789191.1 CDS HPPN120_07835 NC_017378.1 1586622 1587152 D hypothetical protein 1586622..1587152 Helicobacter pylori Puno120 12369524 YP_005789192.1 CDS HPPN120_07840 NC_017378.1 1587142 1588311 D COG0285 Folylpolyglutamate synthase; folylpolyglutamate synthase 1587142..1588311 Helicobacter pylori Puno120 12369525 YP_005789193.1 CDS HPPN120_07845 NC_017378.1 1588311 1589237 D COG0739 Membrane proteins related to metalloendopeptidases; tox-R activated gene 1588311..1589237 Helicobacter pylori Puno120 12369526 YP_005789194.1 CDS HPPN120_07860 NC_017378.1 1590099 1590509 D COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 1590099..1590509 Helicobacter pylori Puno120 12369527 YP_005789195.1 CDS HPPN120_07865 NC_017378.1 1590513 1593512 D COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 1590513..1593512 Helicobacter pylori Puno120 12369528 YP_005789196.1 CDS HPPN120_07870 NC_017378.1 1593638 1594141 D COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1593638..1594141 Helicobacter pylori Puno120 12369529 YP_005789197.1 CDS HPPN120_07875 NC_017378.1 1594152 1595390 D COG1290 Cytochrome b subunit of the bc complex; ubiquinol-cytochrome c reductase cytochrome b subunit 1594152..1595390 Helicobacter pylori Puno120 12369530 YP_005789198.1 CDS HPPN120_07880 NC_017378.1 1595387 1596244 D COG2857 Cytochrome c1; ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit 1595387..1596244 Helicobacter pylori Puno120 12369531 YP_005789199.1 CDS HPPN120_07885 NC_017378.1 1596451 1597122 R hypothetical protein complement(1596451..1597122) Helicobacter pylori Puno120 12369532 YP_005789200.1 CDS HPPN120_07890 NC_017378.1 1597224 1599071 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; cell division protein complement(1597224..1599071) Helicobacter pylori Puno120 12369533 YP_005789201.1 CDS fliE NC_017378.1 1599227 1599556 R COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE complement(1599227..1599556) Helicobacter pylori Puno120 12369534 YP_005789202.1 CDS flgC NC_017378.1 1599682 1600167 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(1599682..1600167) Helicobacter pylori Puno120 12369535 YP_005789203.1 CDS flgB NC_017378.1 1600180 1600602 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(1600180..1600602) Helicobacter pylori Puno120 12369536 YP_005789204.1 CDS HPPN120_07910 NC_017378.1 1600808 1601974 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 1600808..1601974 Helicobacter pylori Puno120 12369537 YP_005789205.1 CDS HPPN120_07915 NC_017378.1 1601998 1603005 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) complement(1601998..1603005) Helicobacter pylori Puno120 12369538 YP_005789206.1 CDS HPPN120_07920 NC_017378.1 1603204 1604205 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron(III) ABC transporter periplasmic iron-binding protein complement(1603204..1604205) Helicobacter pylori Puno120 12369539 YP_005789207.1 CDS HPPN120_07925 NC_017378.1 1604450 1605046 D COG0450 Peroxiredoxin; alkyl hydroperoxide reductase 1604450..1605046 Helicobacter pylori Puno120 12369540 YP_005789208.1 CDS HPPN120_07930 NC_017378.1 1605193 1606008 D COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; outer membrane protein 1605193..1606008 Helicobacter pylori Puno120 12369541 YP_005789209.1 CDS HPPN120_07935 NC_017378.1 1606076 1607851 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(1606076..1607851) Helicobacter pylori Puno120 12369542 YP_005789210.1 CDS HPPN120_07940 NC_017378.1 1607832 1608275 R hypothetical protein complement(1607832..1608275) Helicobacter pylori Puno120 12369543 YP_005789211.1 CDS engB NC_017378.1 1608288 1608914 R COG0218 Predicted GTPase; GTP-binding protein YsxC complement(1608288..1608914) Helicobacter pylori Puno120 12369544 YP_005789212.1 CDS HPPN120_07950 NC_017378.1 1608911 1609468 R COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1608911..1609468) Helicobacter pylori Puno120 12369545 YP_005789213.1 CDS HPPN120_07955 NC_017378.1 1609468 1610061 R hypothetical protein complement(1609468..1610061) Helicobacter pylori Puno120 12369546 YP_005789214.1 CDS HPPN120_07960 NC_017378.1 1610036 1610530 R COG1778 Low specificity phosphatase (HAD superfamily); hypothetical protein complement(1610036..1610530) Helicobacter pylori Puno120 12369547 YP_005789215.1 CDS HPPN120_07965 NC_017378.1 1610527 1611471 R COG0797 Lipoproteins; rare lipoprotein A complement(1610527..1611471) Helicobacter pylori Puno120 12369548 YP_005789216.1 CDS HPPN120_07970 NC_017378.1 1611471 1612583 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); putative regulatory protein complement(1611471..1612583) Helicobacter pylori Puno120 12369549 YP_005789217.1 CDS HPPN120_07975 NC_017378.1 1612684 1613448 R COG0084 Mg-dependent DNase; Mg-dependent DNase complement(1612684..1613448) Helicobacter pylori Puno120 12369550 YP_005789218.1 CDS HPPN120_07980 NC_017378.1 1613523 1614143 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1613523..1614143 Helicobacter pylori Puno120 12369551 YP_005789219.1 CDS HPPN120_07985 NC_017378.1 1614144 1614416 D COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; FlhB-related flagellar biosynthesis protein 1614144..1614416 Helicobacter pylori Puno120 12369552 YP_005789220.1 CDS metN NC_017378.1 1614438 1615421 D COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 1614438..1615421 Helicobacter pylori Puno120 12369553 YP_005789221.1 CDS HPPN120_07995 NC_017378.1 1615423 1616070 D COG2011 ABC-type metal ion transport system, permease component; ABC transporter permease 1615423..1616070 Helicobacter pylori Puno120 12369554 YP_005789222.1 CDS HPPN120_08000 NC_017378.1 1616258 1616689 R hypothetical protein complement(1616258..1616689) Helicobacter pylori Puno120 12369555 YP_005789223.1 CDS HPPN120_08005 NC_017378.1 1616699 1617295 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(1616699..1617295) Helicobacter pylori Puno120 12369556 YP_005789224.1 CDS HPPN120_08010 NC_017378.1 1617295 1618302 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; putative undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase complement(1617295..1618302) Helicobacter pylori Puno120 12369557 YP_005789225.1 CDS HPPN120_08015 NC_017378.1 1618438 1619226 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 1618438..1619226 Helicobacter pylori Puno120 12369558 YP_005789226.1 CDS pdxA NC_017378.1 1619228 1620151 D COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 1619228..1620151 Helicobacter pylori Puno120 12369559 YP_005789227.1 CDS HPPN120_08025 NC_017378.1 1620215 1621237 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 1620215..1621237 Helicobacter pylori Puno120 12369560 YP_005789228.1 CDS flgG NC_017378.1 1621416 1622204 D COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 1621416..1622204 Helicobacter pylori Puno120 12369561 YP_005789229.1 CDS HPPN120_08035 NC_017378.1 1622260 1623258 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1622260..1623258) Helicobacter pylori Puno120 12369562 YP_005789230.1 CDS HPPN120_08040 NC_017378.1 1623749 1623889 R hypothetical protein complement(1623749..1623889) Helicobacter pylori Puno120 12369563 YP_005789231.1 CDS HPPN120_08045 NC_017378.1 1623973 1624734 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1623973..1624734) Helicobacter pylori Puno120 12369564 HPPN120_t08052 tRNA HPPN120_t08052 NC_017378.1 4042 4117 R tRNA-Glu complement(4042..4117) Helicobacter pylori Puno120 12369344 HPPN120_t08054 tRNA HPPN120_t08054 NC_017378.1 4180 4256 R tRNA-Asp complement(4180..4256) Helicobacter pylori Puno120 12369346 HPPN120_t08056 tRNA HPPN120_t08056 NC_017378.1 4297 4372 R tRNA-Val complement(4297..4372) Helicobacter pylori Puno120 12369377 HPPN120_t08058 tRNA HPPN120_t08058 NC_017378.1 4414 4488 R tRNA-Glu complement(4414..4488) Helicobacter pylori Puno120 12367998 HPPN120_t08060 tRNA HPPN120_t08060 NC_017378.1 4499 4574 R tRNA-Lys complement(4499..4574) Helicobacter pylori Puno120 12367999 HPPN120_t08062 tRNA HPPN120_t08062 NC_017378.1 71390 71465 R tRNA-Val complement(71390..71465) Helicobacter pylori Puno120 12368062 HPPN120_t08064 tRNA HPPN120_t08064 NC_017378.1 88644 88735 D tRNA-Ser 88644..88735 Helicobacter pylori Puno120 12368081 HPPN120_t08066 tRNA HPPN120_t08066 NC_017378.1 231034 231108 R tRNA-Asn complement(231034..231108) Helicobacter pylori Puno120 12368216 HPPN120_t08068 tRNA HPPN120_t08068 NC_017378.1 253734 253809 R tRNA-Ala complement(253734..253809) Helicobacter pylori Puno120 12368240 HPPN120_t08070 tRNA HPPN120_t08070 NC_017378.1 334144 334220 D tRNA-Arg 334144..334220 Helicobacter pylori Puno120 12368317 HPPN120_t08072 tRNA HPPN120_t08072 NC_017378.1 384069 384156 R tRNA-Ser complement(384069..384156) Helicobacter pylori Puno120 12368363 HPPN120_t08074 tRNA HPPN120_t08074 NC_017378.1 436795 436872 R tRNA-Pro complement(436795..436872) Helicobacter pylori Puno120 12368418 HPPN120_t08076 tRNA HPPN120_t08076 NC_017378.1 744736 744812 R tRNA-Met complement(744736..744812) Helicobacter pylori Puno120 12368695 HPPN120_t08078 tRNA HPPN120_t08078 NC_017378.1 830794 830870 D tRNA-Arg 830794..830870 Helicobacter pylori Puno120 12368788 HPPN120_t08080 tRNA HPPN120_t08080 NC_017378.1 893137 893213 R tRNA-Met complement(893137..893213) Helicobacter pylori Puno120 12368848 HPPN120_t08082 tRNA HPPN120_t08082 NC_017378.1 893238 893312 R tRNA-Gln complement(893238..893312) Helicobacter pylori Puno120 12368849 HPPN120_t08084 tRNA HPPN120_t08084 NC_017378.1 948286 948360 D tRNA-Gly 948286..948360 Helicobacter pylori Puno120 12368893 HPPN120_t08086 tRNA HPPN120_t08086 NC_017378.1 948756 948842 D tRNA-Leu 948756..948842 Helicobacter pylori Puno120 12368895 HPPN120_t08088 tRNA HPPN120_t08088 NC_017378.1 948917 948991 D tRNA-Cys 948917..948991 Helicobacter pylori Puno120 12368896 HPPN120_t08090 tRNA HPPN120_t08090 NC_017378.1 949039 949126 D tRNA-Ser 949039..949126 Helicobacter pylori Puno120 12368897 HPPN120_t08092 tRNA HPPN120_t08092 NC_017378.1 1030447 1030523 R tRNA-Arg complement(1030447..1030523) Helicobacter pylori Puno120 12368960 HPPN120_t08094 tRNA HPPN120_t08094 NC_017378.1 1030541 1030617 R tRNA-Arg complement(1030541..1030617) Helicobacter pylori Puno120 12368961 HPPN120_t08096 tRNA HPPN120_t08096 NC_017378.1 1030677 1030753 R tRNA-His complement(1030677..1030753) Helicobacter pylori Puno120 12368962 HPPN120_t08098 tRNA HPPN120_t08098 NC_017378.1 1030821 1030898 R tRNA-Pro complement(1030821..1030898) Helicobacter pylori Puno120 12368963 HPPN120_t08100 tRNA HPPN120_t08100 NC_017378.1 1080908 1080992 R tRNA-Leu complement(1080908..1080992) Helicobacter pylori Puno120 12369008 HPPN120_t08102 tRNA HPPN120_t08102 NC_017378.1 1085776 1085852 D tRNA-Ile 1085776..1085852 Helicobacter pylori Puno120 12369014 HPPN120_t08104 tRNA HPPN120_t08104 NC_017378.1 1085867 1085942 D tRNA-Ala 1085867..1085942 Helicobacter pylori Puno120 12369015 HPPN120_t08106 tRNA HPPN120_t08106 NC_017378.1 1178950 1179027 R tRNA-Met complement(1178950..1179027) Helicobacter pylori Puno120 12369109 HPPN120_t08108 tRNA HPPN120_t08108 NC_017378.1 1211822 1211897 R tRNA-Trp complement(1211822..1211897) Helicobacter pylori Puno120 12369135 HPPN120_t08110 tRNA HPPN120_t08110 NC_017378.1 1213455 1213529 R tRNA-Thr complement(1213455..1213529) Helicobacter pylori Puno120 12369138 HPPN120_t08112 tRNA HPPN120_t08112 NC_017378.1 1213560 1213636 R tRNA-Gly complement(1213560..1213636) Helicobacter pylori Puno120 12369139 HPPN120_t08114 tRNA HPPN120_t08114 NC_017378.1 1213652 1213736 R tRNA-Tyr complement(1213652..1213736) Helicobacter pylori Puno120 12369140 HPPN120_t08116 tRNA HPPN120_t08116 NC_017378.1 1213764 1213839 R tRNA-Thr complement(1213764..1213839) Helicobacter pylori Puno120 12369141 HPPN120_t08118 tRNA HPPN120_t08118 NC_017378.1 1219151 1219237 R tRNA-Leu complement(1219151..1219237) Helicobacter pylori Puno120 12369150 HPPN120_t08120 tRNA HPPN120_t08120 NC_017378.1 1219292 1219378 R tRNA-Leu complement(1219292..1219378) Helicobacter pylori Puno120 12369152 HPPN120_t08122 tRNA HPPN120_t08122 NC_017378.1 1511639 1511714 D tRNA-Phe 1511639..1511714 Helicobacter pylori Puno120 12369461 HPPN120_r08124 rRNA HPPN120_r08124 NC_017378.1 1011759 1011876 R 5S ribosomal RNA complement(1011759..1011876) Helicobacter pylori Puno120 12368948 HPPN120_r08132 rRNA HPPN120_r08132 NC_017378.1 1012109 1014986 R 23S ribosomal RNA complement(1012109..1014986) Helicobacter pylori Puno120 12368949 HPPN120_r08128 rRNA HPPN120_r08128 NC_017378.1 1136446 1137954 R 16S ribosomal RNA complement(1136446..1137954) Helicobacter pylori Puno120 12369068 HPPN120_r08126 rRNA HPPN120_r08126 NC_017378.1 1383490 1383607 R 5S ribosomal RNA complement(1383490..1383607) Helicobacter pylori Puno120 12369335 HPPN120_r08134 rRNA HPPN120_r08134 NC_017378.1 1383840 1386717 R 23S ribosomal RNA complement(1383840..1386717) Helicobacter pylori Puno120 12369336 HPPN120_r08130 rRNA HPPN120_r08130 NC_017378.1 1415106 1416614 R 16S ribosomal RNA complement(1415106..1416614) Helicobacter pylori Puno120 12369368