-- dump date 20140619_113603 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 907237000001 SEQ_END SEQ_END NC_017362.1 1624644 1624644 DR NC_017362.1; contig end 1624644..1624644 Helicobacter pylori Lithuania75 907237000002 SEQ_END SEQ_END NC_017363.1 16029 16029 DR NC_017363.1; contig end 16029..16029 Helicobacter pylori Lithuania75 YP_005772181.1 CDS nusB NC_017362.1 11 427 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(11..427) Helicobacter pylori Lithuania75 12352275 YP_005772182.1 CDS ribH NC_017362.1 429 899 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(429..899) Helicobacter pylori Lithuania75 12352277 YP_005772183.1 CDS HPLT_00015 NC_017362.1 909 1739 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(909..1739) Helicobacter pylori Lithuania75 12352279 YP_005772184.1 CDS HPLT_00020 NC_017362.1 1726 2391 R COG0288 Carbonic anhydrase; carbonic anhydrase complement(1726..2391) Helicobacter pylori Lithuania75 12352281 YP_005772185.1 CDS HPLT_00025 NC_017362.1 2513 3196 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2513..3196 Helicobacter pylori Lithuania75 12352288 YP_005772186.1 CDS panC NC_017362.1 3197 4027 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 3197..4027 Helicobacter pylori Lithuania75 12352290 YP_005772187.1 CDS HPLT_00035 NC_017362.1 5053 7278 R outer membrane protein HopZ complement(5053..7278) Helicobacter pylori Lithuania75 12351432 YP_005772188.1 CDS HPLT_00040 NC_017362.1 7700 7849 D hypothetical protein 7700..7849 Helicobacter pylori Lithuania75 12351433 YP_005772189.1 CDS groEL NC_017362.1 7742 9382 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(7742..9382) Helicobacter pylori Lithuania75 12351434 YP_005772190.1 CDS groES NC_017362.1 9408 9764 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(9408..9764) Helicobacter pylori Lithuania75 12351435 YP_005772191.1 CDS dnaG NC_017362.1 10053 11732 D COG0358 DNA primase (bacterial type); DNA primase 10053..11732 Helicobacter pylori Lithuania75 12351436 YP_005772192.1 CDS HPLT_00060 NC_017362.1 11729 12781 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; hypothetical protein 11729..12781 Helicobacter pylori Lithuania75 12351437 YP_005772193.1 CDS HPLT_00065 NC_017362.1 12870 13697 D hypothetical protein 12870..13697 Helicobacter pylori Lithuania75 12351438 YP_005772194.1 CDS HPLT_00070 NC_017362.1 13844 14125 D hypothetical protein 13844..14125 Helicobacter pylori Lithuania75 12351439 YP_005772195.1 CDS HPLT_00075 NC_017362.1 14125 14388 D ComB3 competence protein 14125..14388 Helicobacter pylori Lithuania75 12351440 YP_005772196.1 CDS HPLT_00080 NC_017362.1 14390 16753 D COG3451 Type IV secretory pathway, VirB4 components; type IV secretion system protein VirB4 14390..16753 Helicobacter pylori Lithuania75 12351441 YP_005772197.1 CDS HPLT_00085 NC_017362.1 17055 18395 D COG3014 Uncharacterized protein conserved in bacteria; hypothetical protein 17055..18395 Helicobacter pylori Lithuania75 12351442 YP_005772198.1 CDS HPLT_00090 NC_017362.1 18496 19461 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein 18496..19461 Helicobacter pylori Lithuania75 12351443 YP_005772199.1 CDS HPLT_00095 NC_017362.1 19458 20675 D COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 19458..20675 Helicobacter pylori Lithuania75 12351444 YP_005772200.1 CDS HPLT_00100 NC_017362.1 20694 21269 R COG0671 Membrane-associated phospholipid phosphatase; lipid A 1-phosphatase complement(20694..21269) Helicobacter pylori Lithuania75 12351445 YP_005772201.1 CDS HPLT_00105 NC_017362.1 21280 22845 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; lipid A phosphoethanolamine transferase complement(21280..22845) Helicobacter pylori Lithuania75 12351446 YP_005772202.1 CDS HPLT_00110 NC_017362.1 23034 23126 D hypothetical protein 23034..23126 Helicobacter pylori Lithuania75 12351447 YP_005772203.1 CDS HPLT_00125 NC_017362.1 25768 25860 D hypothetical protein 25768..25860 Helicobacter pylori Lithuania75 12351448 YP_005772204.1 CDS gltA NC_017362.1 26136 27416 R COG0372 Citrate synthase; type II citrate synthase complement(26136..27416) Helicobacter pylori Lithuania75 12351449 YP_005772205.1 CDS HPLT_00135 NC_017362.1 27615 28892 D COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 27615..28892 Helicobacter pylori Lithuania75 12351450 YP_005772206.1 CDS HPLT_00140 NC_017362.1 28959 29486 D hypothetical protein 28959..29486 Helicobacter pylori Lithuania75 12351451 YP_005772207.1 CDS HPLT_00145 NC_017362.1 29463 30119 R COG0132 Dethiobiotin synthetase; dethiobiotin synthetase complement(29463..30119) Helicobacter pylori Lithuania75 12351452 YP_005772208.1 CDS HPLT_00150 NC_017362.1 30123 31922 R COG0515 Serine/threonine protein kinase; hypothetical protein complement(30123..31922) Helicobacter pylori Lithuania75 12351453 YP_005772209.1 CDS HPLT_00155 NC_017362.1 32032 32445 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; putative universal stress global response regulator UspA 32032..32445 Helicobacter pylori Lithuania75 12351454 YP_005772210.1 CDS HPLT_00160 NC_017362.1 32469 32744 D COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adapter protein clpS 32469..32744 Helicobacter pylori Lithuania75 12351455 YP_005772211.1 CDS HPLT_00165 NC_017362.1 32744 34969 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease 32744..34969 Helicobacter pylori Lithuania75 12351456 YP_005772212.1 CDS HPLT_00170 NC_017362.1 34959 35312 D COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 34959..35312 Helicobacter pylori Lithuania75 12351457 YP_005772213.1 CDS HPLT_00175 NC_017362.1 35315 35617 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 35315..35617 Helicobacter pylori Lithuania75 12351458 YP_005772214.1 CDS HPLT_00180 NC_017362.1 35617 36621 D COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; hypothetical protein 35617..36621 Helicobacter pylori Lithuania75 12351459 YP_005772215.1 CDS HPLT_00195 NC_017362.1 37701 37814 D Comb7 competence protein 37701..37814 Helicobacter pylori Lithuania75 12351460 YP_005772216.1 CDS HPLT_00200 NC_017362.1 37811 38554 D COG3736 Type IV secretory pathway, component VirB8; comB8 competence protein 37811..38554 Helicobacter pylori Lithuania75 12351461 YP_005772217.1 CDS HPLT_00205 NC_017362.1 38554 39522 D COG3504 Type IV secretory pathway, VirB9 components; type IV secretion system protein VirB9 38554..39522 Helicobacter pylori Lithuania75 12351462 YP_005772218.1 CDS HPLT_00210 NC_017362.1 39515 40651 D COG2948 Type IV secretory pathway, VirB10 components; ComB10 competence protein 39515..40651 Helicobacter pylori Lithuania75 12351463 YP_005772219.1 CDS HPLT_00215 NC_017362.1 40721 42139 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-6-phosphate isomerase 40721..42139 Helicobacter pylori Lithuania75 12351464 YP_005772220.1 CDS HPLT_00220 NC_017362.1 42149 43294 D COG1089 GDP-D-mannose dehydratase; GDP-D-mannose dehydratase 42149..43294 Helicobacter pylori Lithuania75 12351465 YP_005772221.1 CDS HPLT_00225 NC_017362.1 43287 44219 D COG0451 Nucleoside-diphosphate-sugar epimerases; nodulation protein (nolK) 43287..44219 Helicobacter pylori Lithuania75 12351466 YP_005772222.1 CDS HPLT_00230 NC_017362.1 44312 44419 R hypothetical protein complement(44312..44419) Helicobacter pylori Lithuania75 12351467 YP_005772223.1 CDS HPLT_00235 NC_017362.1 44533 45531 R COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein complement(44533..45531) Helicobacter pylori Lithuania75 12351468 YP_005772224.1 CDS HPLT_00240 NC_017362.1 45534 47786 R COG0068 Hydrogenase maturation factor; hydrogenase maturation protein HypF complement(45534..47786) Helicobacter pylori Lithuania75 12351469 YP_005772225.1 CDS HPLT_00245 NC_017362.1 47783 48775 R COG2957 Peptidylarginine deiminase and related enzymes; agmatine deiminase complement(47783..48775) Helicobacter pylori Lithuania75 12351470 YP_005772226.1 CDS HPLT_00250 NC_017362.1 48916 50550 R COG0270 Site-specific DNA methylase; adenine/cytosine DNA methyltransferase complement(48916..50550) Helicobacter pylori Lithuania75 12351471 YP_005772227.1 CDS HPLT_00255 NC_017362.1 50587 52086 R COG0591 Na+/proline symporter; sodium/proline symporter complement(50587..52086) Helicobacter pylori Lithuania75 12351553 YP_005772228.1 CDS HPLT_00260 NC_017362.1 52113 55670 R COG0506 Proline dehydrogenase; proline/pyrroline-5-carboxylate dehydrogenase complement(52113..55670) Helicobacter pylori Lithuania75 12351554 YP_005772229.1 CDS HPLT_00265 NC_017362.1 55971 56186 D hypothetical protein 55971..56186 Helicobacter pylori Lithuania75 12351555 YP_005772230.1 CDS HPLT_00300 NC_017362.1 60467 60598 D hypothetical protein 60467..60598 Helicobacter pylori Lithuania75 12351556 YP_005772231.1 CDS HPLT_00315 NC_017362.1 61180 61437 D hypothetical protein 61180..61437 Helicobacter pylori Lithuania75 12351557 YP_005772232.1 CDS HPLT_00340 NC_017362.1 62780 63205 D hypothetical protein 62780..63205 Helicobacter pylori Lithuania75 12351558 YP_005772233.1 CDS HPLT_00345 NC_017362.1 63207 63557 D hypothetical protein 63207..63557 Helicobacter pylori Lithuania75 12351559 YP_005772234.1 CDS HPLT_00370 NC_017362.1 66036 66821 R COG0829 Urease accessory protein UreH; urease accessory protein complement(66036..66821) Helicobacter pylori Lithuania75 12351560 YP_005772235.1 CDS HPLT_00375 NC_017362.1 66821 67420 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein UreG complement(66821..67420) Helicobacter pylori Lithuania75 12351561 YP_005772236.1 CDS HPLT_00380 NC_017362.1 67449 68213 R COG0830 Urease accessory protein UreF; urease accessory protein (ureF) complement(67449..68213) Helicobacter pylori Lithuania75 12351562 YP_005772237.1 CDS ureE NC_017362.1 68225 68737 R COG2371 Urease accessory protein UreE; urease accessory protein UreE complement(68225..68737) Helicobacter pylori Lithuania75 12351563 YP_005772238.1 CDS HPLT_00390 NC_017362.1 68739 69326 R COG1138 Cytochrome c biogenesis factor; urea transporter complement(68739..69326) Helicobacter pylori Lithuania75 12351564 YP_005772239.1 CDS ureB NC_017362.1 69519 71228 R COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta complement(69519..71228) Helicobacter pylori Lithuania75 12351565 YP_005772240.1 CDS HPLT_00400 NC_017362.1 71232 71948 R COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha complement(71232..71948) Helicobacter pylori Lithuania75 12351566 YP_005772241.1 CDS lspA NC_017362.1 72299 72772 R COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase complement(72299..72772) Helicobacter pylori Lithuania75 12351568 YP_005772242.1 CDS glmM NC_017362.1 72766 74103 R COG1109 Phosphomannomutase; phosphoglucosamine mutase complement(72766..74103) Helicobacter pylori Lithuania75 12351569 YP_005772243.1 CDS rpsT NC_017362.1 74193 74462 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 74193..74462 Helicobacter pylori Lithuania75 12351570 YP_005772244.1 CDS prfA NC_017362.1 74586 75644 D COG0216 Protein chain release factor A; peptide chain release factor 1 74586..75644 Helicobacter pylori Lithuania75 12351571 YP_005772245.1 CDS HPLT_00425 NC_017362.1 76050 76832 D hypothetical protein 76050..76832 Helicobacter pylori Lithuania75 12351572 YP_005772246.1 CDS HPLT_00430 NC_017362.1 76985 77083 R hypothetical protein complement(76985..77083) Helicobacter pylori Lithuania75 12351573 YP_005772247.1 CDS HPLT_00435 NC_017362.1 77083 78864 D hypothetical protein 77083..78864 Helicobacter pylori Lithuania75 12351574 YP_005772248.1 CDS HPLT_00440 NC_017362.1 79038 79139 D hypothetical protein 79038..79139 Helicobacter pylori Lithuania75 12351575 YP_005772249.1 CDS HPLT_00445 NC_017362.1 79173 79277 D hypothetical protein 79173..79277 Helicobacter pylori Lithuania75 12351576 YP_005772250.1 CDS HPLT_00450 NC_017362.1 79287 81308 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(79287..81308) Helicobacter pylori Lithuania75 12351577 YP_005772251.1 CDS rpsI NC_017362.1 81449 81838 R COG0103 Ribosomal protein S9; 30S ribosomal protein S9 complement(81449..81838) Helicobacter pylori Lithuania75 12351578 YP_005772252.1 CDS rplM NC_017362.1 81835 82260 R COG0102 Ribosomal protein L13; 50S ribosomal protein L13 complement(81835..82260) Helicobacter pylori Lithuania75 12351579 YP_005772253.1 CDS HPLT_00465 NC_017362.1 82567 82755 R hypothetical protein complement(82567..82755) Helicobacter pylori Lithuania75 12351580 YP_005772254.1 CDS HPLT_00470 NC_017362.1 82762 84114 R COG0579 Predicted dehydrogenase; malate:quinone oxidoreductase complement(82762..84114) Helicobacter pylori Lithuania75 12351581 YP_005772255.1 CDS HPLT_00475 NC_017362.1 84168 85541 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein complement(84168..85541) Helicobacter pylori Lithuania75 12351582 YP_005772256.1 CDS HPLT_00480 NC_017362.1 85562 87604 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(85562..87604) Helicobacter pylori Lithuania75 12351583 YP_005772257.1 CDS HPLT_00485 NC_017362.1 87768 88463 R COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(87768..88463) Helicobacter pylori Lithuania75 12351584 YP_005772258.1 CDS HPLT_00490 NC_017362.1 88474 89403 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(88474..89403) Helicobacter pylori Lithuania75 12351585 YP_005772259.1 CDS HPLT_00495 NC_017362.1 89844 90827 D COG2958 Uncharacterized protein conserved in bacteria; HrgA protein 89844..90827 Helicobacter pylori Lithuania75 12351587 YP_005772260.1 CDS HPLT_00500 NC_017362.1 90831 91652 D COG0863 DNA modification methylase; type II adenine methyltransferase 90831..91652 Helicobacter pylori Lithuania75 12351588 YP_005772261.1 CDS HPLT_00505 NC_017362.1 91678 92577 R alpha-1,2-fucosyltransferase complement(91678..92577) Helicobacter pylori Lithuania75 12351589 YP_005772262.1 CDS HPLT_00510 NC_017362.1 92672 93202 R hypothetical protein complement(92672..93202) Helicobacter pylori Lithuania75 12351590 YP_005772263.1 CDS HPLT_00515 NC_017362.1 93275 94219 D COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 93275..94219 Helicobacter pylori Lithuania75 12351591 YP_005772264.1 CDS HPLT_00520 NC_017362.1 94202 94375 R hypothetical protein complement(94202..94375) Helicobacter pylori Lithuania75 12351592 YP_005772265.1 CDS HPLT_00525 NC_017362.1 94595 95308 R hypothetical protein complement(94595..95308) Helicobacter pylori Lithuania75 12351593 YP_005772266.1 CDS HPLT_00530 NC_017362.1 95415 96869 R COG0498 Threonine synthase; threonine synthase complement(95415..96869) Helicobacter pylori Lithuania75 12351594 YP_005772267.1 CDS HPLT_00535 NC_017362.1 97072 99099 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis transmembrane sensory protein 97072..99099 Helicobacter pylori Lithuania75 12351595 YP_005772268.1 CDS HPLT_00540 NC_017362.1 99099 100205 D COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein 99099..100205 Helicobacter pylori Lithuania75 12351596 YP_005772269.1 CDS HPLT_00545 NC_017362.1 100339 101100 D hypothetical protein 100339..101100 Helicobacter pylori Lithuania75 12351597 YP_005772270.1 CDS HPLT_00550 NC_017362.1 101083 101865 R COG0463 Glycosyltransferases involved in cell wall biogenesis; glycosyltransferase complement(101083..101865) Helicobacter pylori Lithuania75 12351598 YP_005772271.1 CDS HPLT_00555 NC_017362.1 101896 103593 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein (tlpB) complement(101896..103593) Helicobacter pylori Lithuania75 12351599 YP_005772272.1 CDS HPLT_00560 NC_017362.1 103801 105546 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(103801..105546) Helicobacter pylori Lithuania75 12351600 YP_005772273.1 CDS HPLT_00565 NC_017362.1 105686 106144 R COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase complement(105686..106144) Helicobacter pylori Lithuania75 12351601 YP_005772274.1 CDS HPLT_00570 NC_017362.1 106182 107324 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase complement(106182..107324) Helicobacter pylori Lithuania75 12351602 YP_005772275.1 CDS HPLT_00575 NC_017362.1 107349 108266 R COG0031 Cysteine synthase; cysteine synthetase complement(107349..108266) Helicobacter pylori Lithuania75 12351603 YP_005772276.1 CDS HPLT_00580 NC_017362.1 108382 108960 D hypothetical protein 108382..108960 Helicobacter pylori Lithuania75 12351604 YP_005772277.1 CDS dnaK NC_017362.1 109212 111074 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(109212..111074) Helicobacter pylori Lithuania75 12351605 YP_005772278.1 CDS HPLT_00590 NC_017362.1 111105 111680 R COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE complement(111105..111680) Helicobacter pylori Lithuania75 12351606 YP_005772279.1 CDS HPLT_00595 NC_017362.1 111680 112510 R COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor complement(111680..112510) Helicobacter pylori Lithuania75 12351607 YP_005772280.1 CDS HPLT_00600 NC_017362.1 112721 113359 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 112721..113359 Helicobacter pylori Lithuania75 12351608 YP_005772281.1 CDS HPLT_00605 NC_017362.1 113380 113676 D hypothetical protein 113380..113676 Helicobacter pylori Lithuania75 12351609 YP_005772282.1 CDS HPLT_00610 NC_017362.1 113686 115569 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(113686..115569) Helicobacter pylori Lithuania75 12351610 YP_005772283.1 CDS HPLT_00615 NC_017362.1 115630 117174 R COG1344 Flagellin and related hook-associated proteins; flagellin B complement(115630..117174) Helicobacter pylori Lithuania75 12351611 YP_005772284.1 CDS HPLT_00620 NC_017362.1 117340 119550 D COG0550 Topoisomerase IA; DNA topoisomerase I 117340..119550 Helicobacter pylori Lithuania75 12351612 YP_005772285.1 CDS HPLT_00625 NC_017362.1 119543 120478 D COG0731 Fe-S oxidoreductases; hypothetical protein 119543..120478 Helicobacter pylori Lithuania75 12351613 YP_005772286.1 CDS HPLT_00630 NC_017362.1 120591 121664 R hypothetical protein complement(120591..121664) Helicobacter pylori Lithuania75 12351614 YP_005772287.1 CDS HPLT_00635 NC_017362.1 121971 123221 R hypothetical protein complement(121971..123221) Helicobacter pylori Lithuania75 12351615 YP_005772288.1 CDS HPLT_00640 NC_017362.1 123322 125760 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase complement(123322..125760) Helicobacter pylori Lithuania75 12351616 YP_005772289.1 CDS HPLT_00645 NC_017362.1 125963 126076 D hypothetical protein 125963..126076 Helicobacter pylori Lithuania75 12351617 YP_005772290.1 CDS thrS NC_017362.1 126144 127982 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 126144..127982 Helicobacter pylori Lithuania75 12351618 YP_005772291.1 CDS infC NC_017362.1 127979 128590 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 127979..128590 Helicobacter pylori Lithuania75 12351619 YP_005772292.1 CDS rpmI NC_017362.1 128571 128765 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 128571..128765 Helicobacter pylori Lithuania75 12351620 YP_005772293.1 CDS rplT NC_017362.1 128861 129211 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 128861..129211 Helicobacter pylori Lithuania75 12351621 YP_005772294.1 CDS HPLT_00670 NC_017362.1 129412 130272 D outer membrane protein 129412..130272 Helicobacter pylori Lithuania75 12351622 YP_005772295.1 CDS HPLT_00675 NC_017362.1 130324 130449 D hypothetical protein 130324..130449 Helicobacter pylori Lithuania75 12351623 YP_005772296.1 CDS HPLT_00680 NC_017362.1 130626 131063 D hypothetical protein 130626..131063 Helicobacter pylori Lithuania75 12351624 YP_005772297.1 CDS HPLT_00685 NC_017362.1 131462 132319 D hypothetical protein 131462..132319 Helicobacter pylori Lithuania75 12351625 YP_005772298.1 CDS HPLT_00690 NC_017362.1 133059 133187 D hypothetical protein 133059..133187 Helicobacter pylori Lithuania75 12351626 YP_005772299.1 CDS HPLT_00695 NC_017362.1 133220 134587 R COG1760 L-serine deaminase; L-serine dehydratase complement(133220..134587) Helicobacter pylori Lithuania75 12351627 YP_005772300.1 CDS HPLT_00700 NC_017362.1 134587 135828 R COG0814 Amino acid permeases; Aminoacid transport protein, HAAAP family; putative membrane protein complement(134587..135828) Helicobacter pylori Lithuania75 12351628 YP_005772301.1 CDS HPLT_00705 NC_017362.1 136009 137358 D COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 136009..137358 Helicobacter pylori Lithuania75 12351629 YP_005772302.1 CDS HPLT_00710 NC_017362.1 137648 137782 D hypothetical protein 137648..137782 Helicobacter pylori Lithuania75 12351630 YP_005772303.1 CDS HPLT_00715 NC_017362.1 138031 138489 R COG1225 Peroxiredoxin; bacterioferritin comigratory protein complement(138031..138489) Helicobacter pylori Lithuania75 12351631 YP_005772304.1 CDS HPLT_00720 NC_017362.1 138499 139134 R COG1556 Uncharacterized conserved protein; hypothetical protein complement(138499..139134) Helicobacter pylori Lithuania75 12351632 YP_005772305.1 CDS HPLT_00725 NC_017362.1 139127 140572 R COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; iron-sulfur cluster binding protein complement(139127..140572) Helicobacter pylori Lithuania75 12351633 YP_005772306.1 CDS HPLT_00730 NC_017362.1 140600 141328 R COG0247 Fe-S oxidoreductase; (S)-2-hydroxy-acid oxidase complement(140600..141328) Helicobacter pylori Lithuania75 12351715 YP_005772307.1 CDS HPLT_00735 NC_017362.1 141548 143197 D COG1620 L-lactate permease; L-lactate permease 141548..143197 Helicobacter pylori Lithuania75 12351716 YP_005772308.1 CDS HPLT_00740 NC_017362.1 143254 144909 D COG1620 L-lactate permease; L-lactate permease 143254..144909 Helicobacter pylori Lithuania75 12351717 YP_005772309.1 CDS HPLT_00745 NC_017362.1 144933 145802 R COG1194 A/G-specific DNA glycosylase; DNA glycosylase MutY complement(144933..145802) Helicobacter pylori Lithuania75 12351718 YP_005772310.1 CDS HPLT_00750 NC_017362.1 145920 147368 R COG0471 Di- and tricarboxylate transporters; C(4)-dicarboxylates and tricarboxylates/succinate antiporter complement(145920..147368) Helicobacter pylori Lithuania75 12351719 YP_005772311.1 CDS HPLT_00755 NC_017362.1 147538 149004 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 147538..149004 Helicobacter pylori Lithuania75 12351720 YP_005772312.1 CDS HPLT_00760 NC_017362.1 149017 149715 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 149017..149715 Helicobacter pylori Lithuania75 12351721 YP_005772313.1 CDS HPLT_00765 NC_017362.1 149726 149944 D cytochrome c oxidase subunit Q 149726..149944 Helicobacter pylori Lithuania75 12351722 YP_005772314.1 CDS HPLT_00770 NC_017362.1 149946 150824 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c oxidase, cbb3-type subunit III 149946..150824 Helicobacter pylori Lithuania75 12351723 YP_005772315.1 CDS HPLT_00775 NC_017362.1 150835 151041 D hypothetical protein 150835..151041 Helicobacter pylori Lithuania75 12351724 YP_005772316.1 CDS HPLT_00780 NC_017362.1 151038 151145 D hypothetical protein 151038..151145 Helicobacter pylori Lithuania75 12351725 YP_005772317.1 CDS HPLT_00785 NC_017362.1 151181 151726 D COG0443 Molecular chaperone; hypothetical protein 151181..151726 Helicobacter pylori Lithuania75 12351726 YP_005772318.1 CDS HPLT_00790 NC_017362.1 151738 152319 D hypothetical protein 151738..152319 Helicobacter pylori Lithuania75 12351727 YP_005772319.1 CDS HPLT_00795 NC_017362.1 152550 152708 R hypothetical protein complement(152550..152708) Helicobacter pylori Lithuania75 12351728 YP_005772320.1 CDS HPLT_00800 NC_017362.1 153171 154034 R COG2107 Predicted periplasmic solute-binding protein; hypothetical protein complement(153171..154034) Helicobacter pylori Lithuania75 12351729 YP_005772321.1 CDS recA NC_017362.1 154132 155175 D COG0468 RecA/RadA recombinase; recombinase A 154132..155175 Helicobacter pylori Lithuania75 12351730 YP_005772322.1 CDS eno NC_017362.1 155187 156467 D COG0148 Enolase; phosphopyruvate hydratase 155187..156467 Helicobacter pylori Lithuania75 12351731 YP_005772323.1 CDS HPLT_00815 NC_017362.1 156460 156735 D hypothetical protein 156460..156735 Helicobacter pylori Lithuania75 12351732 YP_005772324.1 CDS HPLT_00820 NC_017362.1 156747 157349 D hypothetical protein 156747..157349 Helicobacter pylori Lithuania75 12351733 YP_005772325.1 CDS aroK NC_017362.1 157354 157842 D COG0703 Shikimate kinase; shikimate kinase 157354..157842 Helicobacter pylori Lithuania75 12351734 YP_005772326.1 CDS HPLT_00830 NC_017362.1 157863 158819 D general glycosylation pathway protein 157863..158819 Helicobacter pylori Lithuania75 12351735 YP_005772327.1 CDS HPLT_00835 NC_017362.1 158816 159934 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide 1,2-glucosyltransferase RfaJ complement(158816..159934) Helicobacter pylori Lithuania75 12351736 YP_005772328.1 CDS HPLT_00840 NC_017362.1 160086 161006 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 160086..161006 Helicobacter pylori Lithuania75 12351737 YP_005772329.1 CDS HPLT_00845 NC_017362.1 161108 161299 D hypothetical protein 161108..161299 Helicobacter pylori Lithuania75 12351738 YP_005772330.1 CDS HPLT_00850 NC_017362.1 161326 161439 R hypothetical protein complement(161326..161439) Helicobacter pylori Lithuania75 12351739 YP_005772331.1 CDS HPLT_00855 NC_017362.1 161540 162262 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(161540..162262) Helicobacter pylori Lithuania75 12351740 YP_005772332.1 CDS HPLT_00860 NC_017362.1 162263 163234 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(162263..163234) Helicobacter pylori Lithuania75 12351741 YP_005772333.1 CDS HPLT_00865 NC_017362.1 163306 164589 R COG0642 Signal transduction histidine kinase; Histidine kinase sensor protein; putative signal peptide complement(163306..164589) Helicobacter pylori Lithuania75 12351742 YP_005772334.1 CDS HPLT_00870 NC_017362.1 164615 165292 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator complement(164615..165292) Helicobacter pylori Lithuania75 12351743 YP_005772335.1 CDS HPLT_00875 NC_017362.1 165527 165991 R hypothetical protein complement(165527..165991) Helicobacter pylori Lithuania75 12351744 YP_005772336.1 CDS HPLT_00880 NC_017362.1 165982 166245 R COG0457 FOG: TPR repeat; hypothetical protein complement(165982..166245) Helicobacter pylori Lithuania75 12351745 YP_005772337.1 CDS HPLT_00885 NC_017362.1 166289 167569 R COG0826 Collagenase and related proteases; collagenase complement(166289..167569) Helicobacter pylori Lithuania75 12351746 YP_005772338.1 CDS HPLT_00890 NC_017362.1 167572 168303 R hypothetical protein complement(167572..168303) Helicobacter pylori Lithuania75 12351747 YP_005772339.1 CDS prfB NC_017362.1 168373 169464 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(168373..169464) Helicobacter pylori Lithuania75 12351748 YP_005772340.1 CDS HPLT_00900 NC_017362.1 169525 170700 R COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein complement(169525..170700) Helicobacter pylori Lithuania75 12351749 YP_005772341.1 CDS fliR NC_017362.1 170710 171477 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(170710..171477) Helicobacter pylori Lithuania75 12351750 YP_005772342.1 CDS HPLT_00910 NC_017362.1 171471 172199 R hypothetical protein complement(171471..172199) Helicobacter pylori Lithuania75 12351751 YP_005772343.1 CDS HPLT_00915 NC_017362.1 172261 172533 R hypothetical protein complement(172261..172533) Helicobacter pylori Lithuania75 12351752 YP_005772344.1 CDS HPLT_00920 NC_017362.1 172680 173579 D COG0760 Parvulin-like peptidyl-prolyl isomerase; peptidyl-prolyl cis-trans isomerase C 172680..173579 Helicobacter pylori Lithuania75 12351753 YP_005772345.1 CDS HPLT_00925 NC_017362.1 173597 174520 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 173597..174520 Helicobacter pylori Lithuania75 12351754 YP_005772346.1 CDS HPLT_00930 NC_017362.1 174542 175105 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 174542..175105 Helicobacter pylori Lithuania75 12351755 YP_005772347.1 CDS HPLT_00935 NC_017362.1 175634 176656 R COG2089 Sialic acid synthase; sialic acid synthase complement(175634..176656) Helicobacter pylori Lithuania75 12351756 YP_005772348.1 CDS HPLT_00940 NC_017362.1 176660 177301 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein complement(176660..177301) Helicobacter pylori Lithuania75 12351757 YP_005772349.1 CDS HPLT_00945 NC_017362.1 177298 178575 R COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(177298..178575) Helicobacter pylori Lithuania75 12351758 YP_005772350.1 CDS HPLT_00950 NC_017362.1 178811 179512 D COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 178811..179512 Helicobacter pylori Lithuania75 12351759 YP_005772351.1 CDS lysS NC_017362.1 179522 181027 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 179522..181027 Helicobacter pylori Lithuania75 12351760 YP_005772352.1 CDS HPLT_00960 NC_017362.1 181027 182277 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 181027..182277 Helicobacter pylori Lithuania75 12351761 YP_005772353.1 CDS HPLT_00965 NC_017362.1 182288 182830 D hypothetical protein 182288..182830 Helicobacter pylori Lithuania75 12351762 YP_005772354.1 CDS HPLT_00970 NC_017362.1 182852 183649 D hypothetical protein 182852..183649 Helicobacter pylori Lithuania75 12351763 YP_005772355.1 CDS HPLT_00990 NC_017362.1 185892 186425 D COG2862 Predicted membrane protein; hypothetical protein 185892..186425 Helicobacter pylori Lithuania75 12351764 YP_005772356.1 CDS HPLT_00995 NC_017362.1 186431 187939 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; hypothetical protein complement(186431..187939) Helicobacter pylori Lithuania75 12351765 YP_005772357.1 CDS frdB NC_017362.1 187961 188698 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit complement(187961..188698) Helicobacter pylori Lithuania75 12351766 YP_005772358.1 CDS HPLT_01005 NC_017362.1 188691 190835 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit complement(188691..190835) Helicobacter pylori Lithuania75 12351767 YP_005772359.1 CDS HPLT_01010 NC_017362.1 190845 191612 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; fumarate reductase cytochrome b-556 subunit complement(190845..191612) Helicobacter pylori Lithuania75 12351768 YP_005772360.1 CDS tpiA NC_017362.1 191824 192528 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 191824..192528 Helicobacter pylori Lithuania75 12351769 YP_005772361.1 CDS HPLT_01020 NC_017362.1 192538 193365 D COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 192538..193365 Helicobacter pylori Lithuania75 12351770 YP_005772362.1 CDS lpxD NC_017362.1 193375 194385 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 193375..194385 Helicobacter pylori Lithuania75 12351771 YP_005772363.1 CDS HPLT_01030 NC_017362.1 194450 195607 D COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 194450..195607 Helicobacter pylori Lithuania75 12351772 YP_005772364.1 CDS ndk NC_017362.1 195673 196086 D COG0105 Nucleoside diphosphate kinase; nucleoside diphosphate kinase 195673..196086 Helicobacter pylori Lithuania75 12351773 YP_005772365.1 CDS HPLT_01040 NC_017362.1 196112 196468 D hypothetical protein 196112..196468 Helicobacter pylori Lithuania75 12351774 YP_005772366.1 CDS rpmF NC_017362.1 196484 196630 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 196484..196630 Helicobacter pylori Lithuania75 12351775 YP_005772367.1 CDS HPLT_01050 NC_017362.1 196708 197727 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative glycerol-3-phosphate acyltransferase PlsX 196708..197727 Helicobacter pylori Lithuania75 12351776 YP_005772368.1 CDS HPLT_01055 NC_017362.1 197752 198744 D COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 197752..198744 Helicobacter pylori Lithuania75 12351777 YP_005772369.1 CDS HPLT_01060 NC_017362.1 198791 199066 D hypothetical protein 198791..199066 Helicobacter pylori Lithuania75 12351778 YP_005772370.1 CDS HPLT_01065 NC_017362.1 199691 200074 R hypothetical protein complement(199691..200074) Helicobacter pylori Lithuania75 12351779 YP_005772371.1 CDS HPLT_01070 NC_017362.1 200152 203313 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; hypothetical protein complement(200152..203313) Helicobacter pylori Lithuania75 12351780 YP_005772372.1 CDS HPLT_01075 NC_017362.1 203410 204516 D COG0489 ATPases involved in chromosome partitioning; ATP-binding protein (mpr) 203410..204516 Helicobacter pylori Lithuania75 12351781 YP_005772373.1 CDS HPLT_01080 NC_017362.1 204528 205559 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; LPS 1, 2-glycosyltransferase complement(204528..205559) Helicobacter pylori Lithuania75 12351782 YP_005772374.1 CDS HPLT_01085 NC_017362.1 205583 205696 R putative lipopolysaccharide biosynthesis protein complement(205583..205696) Helicobacter pylori Lithuania75 12351783 YP_005772375.1 CDS HPLT_01090 NC_017362.1 205846 207198 D hypothetical protein 205846..207198 Helicobacter pylori Lithuania75 12351784 YP_005772376.1 CDS HPLT_01095 NC_017362.1 207301 209166 D COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 207301..209166 Helicobacter pylori Lithuania75 12351785 YP_005772377.1 CDS HPLT_01100 NC_017362.1 209367 210119 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(209367..210119) Helicobacter pylori Lithuania75 12351786 YP_005772378.1 CDS HPLT_01105 NC_017362.1 210306 210584 R hypothetical protein complement(210306..210584) Helicobacter pylori Lithuania75 12351787 YP_005772379.1 CDS HPLT_01110 NC_017362.1 210581 211762 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(210581..211762) Helicobacter pylori Lithuania75 12351788 YP_005772380.1 CDS HPLT_01115 NC_017362.1 211773 213638 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(211773..213638) Helicobacter pylori Lithuania75 12351789 YP_005772381.1 CDS HPLT_01120 NC_017362.1 213734 215395 D COG0471 Di- and tricarboxylate transporters; sodium-dependent transporter 213734..215395 Helicobacter pylori Lithuania75 12351790 YP_005772382.1 CDS HPLT_01125 NC_017362.1 215404 216204 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 215404..216204 Helicobacter pylori Lithuania75 12351791 YP_005772383.1 CDS HPLT_01130 NC_017362.1 216205 217311 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 216205..217311 Helicobacter pylori Lithuania75 12351792 YP_005772384.1 CDS HPLT_01135 NC_017362.1 217362 217667 D hypothetical protein 217362..217667 Helicobacter pylori Lithuania75 12351793 YP_005772385.1 CDS HPLT_01140 NC_017362.1 217642 218502 D hypothetical protein 217642..218502 Helicobacter pylori Lithuania75 12351794 YP_005772386.1 CDS HPLT_01145 NC_017362.1 218518 219069 R COG1881 Phospholipid-binding protein; hypothetical protein complement(218518..219069) Helicobacter pylori Lithuania75 12351795 YP_005772387.1 CDS HPLT_01150 NC_017362.1 219214 219675 D hypothetical protein 219214..219675 Helicobacter pylori Lithuania75 12351877 YP_005772388.1 CDS HPLT_01155 NC_017362.1 219846 221009 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 219846..221009 Helicobacter pylori Lithuania75 12351878 YP_005772389.1 CDS HPLT_01160 NC_017362.1 221031 222011 D COG0822 NifU homolog involved in Fe-S cluster formation; nifu-like protein 221031..222011 Helicobacter pylori Lithuania75 12351879 YP_005772390.1 CDS HPLT_01165 NC_017362.1 222167 222400 D hypothetical protein 222167..222400 Helicobacter pylori Lithuania75 12351880 YP_005772391.1 CDS HPLT_01170 NC_017362.1 222512 223858 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 222512..223858 Helicobacter pylori Lithuania75 12351881 YP_005772392.1 CDS HPLT_01175 NC_017362.1 223982 225061 D COG0225 Peptide methionine sulfoxide reductase; bifunctional methionine sulfoxide reductase A/B 223982..225061 Helicobacter pylori Lithuania75 12351882 YP_005772393.1 CDS HPLT_01180 NC_017362.1 225427 226260 R COG0730 Predicted permeases; hypothetical protein complement(225427..226260) Helicobacter pylori Lithuania75 12351883 YP_005772394.1 CDS HPLT_01185 NC_017362.1 226472 228532 R outer membrane protein complement(226472..228532) Helicobacter pylori Lithuania75 12351884 YP_005772395.1 CDS HPLT_01190 NC_017362.1 228794 229951 D COG0659 Sulfate permease and related transporters (MFS superfamily); putative sulfate permease; putative membrane protein 228794..229951 Helicobacter pylori Lithuania75 12351885 YP_005772396.1 CDS HPLT_01195 NC_017362.1 230193 231656 R outer membrane protein HopA complement(230193..231656) Helicobacter pylori Lithuania75 12351887 YP_005772397.1 CDS HPLT_01200 NC_017362.1 231850 232581 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(231850..232581) Helicobacter pylori Lithuania75 12351888 YP_005772398.1 CDS HPLT_01205 NC_017362.1 232694 233491 D COG1651 Protein-disulfide isomerase; disulfide isomerase 232694..233491 Helicobacter pylori Lithuania75 12351889 YP_005772399.1 CDS HPLT_01210 NC_017362.1 233507 234157 D hypothetical protein 233507..234157 Helicobacter pylori Lithuania75 12351890 YP_005772400.1 CDS HPLT_01215 NC_017362.1 234181 235353 D COG0754 Glutathionylspermidine synthase; hypothetical protein 234181..235353 Helicobacter pylori Lithuania75 12351891 YP_005772401.1 CDS HPLT_01220 NC_017362.1 235353 235883 D integral membrane protein 235353..235883 Helicobacter pylori Lithuania75 12351892 YP_005772402.1 CDS HPLT_01225 NC_017362.1 236655 237722 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(236655..237722) Helicobacter pylori Lithuania75 12351893 YP_005772403.1 CDS HPLT_01230 NC_017362.1 237816 238187 R hypothetical protein complement(237816..238187) Helicobacter pylori Lithuania75 12351894 YP_005772404.1 CDS hemC NC_017362.1 238187 239107 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(238187..239107) Helicobacter pylori Lithuania75 12351895 YP_005772405.1 CDS HPLT_01240 NC_017362.1 239118 240851 R COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(239118..240851) Helicobacter pylori Lithuania75 12351896 YP_005772406.1 CDS hemA NC_017362.1 240855 242204 R COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(240855..242204) Helicobacter pylori Lithuania75 12351897 YP_005772407.1 CDS HPLT_01250 NC_017362.1 242204 243127 R COG0142 Geranylgeranyl pyrophosphate synthase; Octaprenyl-diphosphate synthase (Octaprenyl pyrophosphate synthetase) (OPP synthetase) complement(242204..243127) Helicobacter pylori Lithuania75 12351898 YP_005772408.1 CDS HPLT_01255 NC_017362.1 243137 243532 R hypothetical protein complement(243137..243532) Helicobacter pylori Lithuania75 12351899 YP_005772409.1 CDS HPLT_01260 NC_017362.1 243525 243809 R hypothetical protein complement(243525..243809) Helicobacter pylori Lithuania75 12351900 YP_005772410.1 CDS HPLT_01265 NC_017362.1 243830 244264 R COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); neutrophil activating protein (napA) (bacterioferritin) complement(243830..244264) Helicobacter pylori Lithuania75 12351901 YP_005772411.1 CDS HPLT_01270 NC_017362.1 244471 245616 R COG0642 Signal transduction histidine kinase; putative signal-transducing protein AtoS, histidine kinase complement(244471..245616) Helicobacter pylori Lithuania75 12351902 YP_005772412.1 CDS HPLT_01275 NC_017362.1 245613 245930 R hypothetical protein complement(245613..245930) Helicobacter pylori Lithuania75 12351903 YP_005772413.1 CDS flgI NC_017362.1 245927 246955 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(245927..246955) Helicobacter pylori Lithuania75 12351904 YP_005772414.1 CDS HPLT_01285 NC_017362.1 247144 248619 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase 247144..248619 Helicobacter pylori Lithuania75 12351905 YP_005772415.1 CDS HPLT_01290 NC_017362.1 248640 249728 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 248640..249728 Helicobacter pylori Lithuania75 12351906 YP_005772416.1 CDS HPLT_01295 NC_017362.1 249735 250274 D hypothetical protein 249735..250274 Helicobacter pylori Lithuania75 12351907 YP_005772417.1 CDS HPLT_01300 NC_017362.1 250357 251907 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; peptide/nickel transport system ATP-binding protein complement(250357..251907) Helicobacter pylori Lithuania75 12351908 YP_005772418.1 CDS HPLT_01305 NC_017362.1 251917 252939 R COG4239 ABC-type uncharacterized transport system, permease component; oligopeptide permease integral membrane protein complement(251917..252939) Helicobacter pylori Lithuania75 12351909 YP_005772419.1 CDS HPLT_01310 NC_017362.1 253203 253295 D hypothetical protein 253203..253295 Helicobacter pylori Lithuania75 12351911 YP_005772420.1 CDS HPLT_01315 NC_017362.1 253276 254718 D Outer membrane protein HopF; putative signal peptide 253276..254718 Helicobacter pylori Lithuania75 12351912 YP_005772421.1 CDS HPLT_01320 NC_017362.1 254731 256143 D outer membrane protein 254731..256143 Helicobacter pylori Lithuania75 12351913 YP_005772422.1 CDS HPLT_01325 NC_017362.1 256242 257477 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 256242..257477 Helicobacter pylori Lithuania75 12351914 YP_005772423.1 CDS HPLT_01330 NC_017362.1 257474 257902 D hypothetical protein 257474..257902 Helicobacter pylori Lithuania75 12351915 YP_005772424.1 CDS HPLT_01335 NC_017362.1 257895 258566 D COG3334 Uncharacterized conserved protein; hypothetical protein 257895..258566 Helicobacter pylori Lithuania75 12351916 YP_005772425.1 CDS HPLT_01340 NC_017362.1 258563 259618 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein 258563..259618 Helicobacter pylori Lithuania75 12351917 YP_005772426.1 CDS xseA NC_017362.1 259631 260893 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 259631..260893 Helicobacter pylori Lithuania75 12351918 YP_005772427.1 CDS HPLT_01350 NC_017362.1 261169 261864 D Endonuclease MjaVIP 261169..261864 Helicobacter pylori Lithuania75 12351919 YP_005772428.1 CDS HPLT_01355 NC_017362.1 261861 262619 D COG0863 DNA modification methylase; putative adenine-specific DNA-methyltransferase 261861..262619 Helicobacter pylori Lithuania75 12351920 YP_005772429.1 CDS HPLT_01360 NC_017362.1 262692 265262 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease binding subunit 262692..265262 Helicobacter pylori Lithuania75 12351921 YP_005772430.1 CDS HPLT_01365 NC_017362.1 265320 266039 D COG0785 Cytochrome c biogenesis protein; cytochrome c biogenesis protein 265320..266039 Helicobacter pylori Lithuania75 12351922 YP_005772431.1 CDS HPLT_01370 NC_017362.1 266049 267182 D COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 266049..267182 Helicobacter pylori Lithuania75 12351923 YP_005772432.1 CDS HPLT_01375 NC_017362.1 267170 268396 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; chlorohydrolase 267170..268396 Helicobacter pylori Lithuania75 12351924 YP_005772433.1 CDS HPLT_01380 NC_017362.1 268458 268700 D hypothetical protein 268458..268700 Helicobacter pylori Lithuania75 12351925 YP_005772434.1 CDS HPLT_01385 NC_017362.1 268710 270023 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 268710..270023 Helicobacter pylori Lithuania75 12351926 YP_005772435.1 CDS HPLT_01390 NC_017362.1 270061 270714 D COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein 270061..270714 Helicobacter pylori Lithuania75 12351927 YP_005772436.1 CDS HPLT_01395 NC_017362.1 270707 271687 D hypothetical protein 270707..271687 Helicobacter pylori Lithuania75 12351928 YP_005772437.1 CDS HPLT_01400 NC_017362.1 271677 272210 D hypothetical protein 271677..272210 Helicobacter pylori Lithuania75 12351929 YP_005772438.1 CDS HPLT_01405 NC_017362.1 272207 272746 D hypothetical protein 272207..272746 Helicobacter pylori Lithuania75 12351930 YP_005772439.1 CDS HPLT_01410 NC_017362.1 272762 273160 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 272762..273160 Helicobacter pylori Lithuania75 12351931 YP_005772440.1 CDS HPLT_01415 NC_017362.1 273197 274492 D COG0457 FOG: TPR repeat; hypothetical protein 273197..274492 Helicobacter pylori Lithuania75 12351932 YP_005772441.1 CDS HPLT_01420 NC_017362.1 274480 275022 D COG0134 Indole-3-glycerol phosphate synthase; hypothetical protein 274480..275022 Helicobacter pylori Lithuania75 12351933 YP_005772442.1 CDS HPLT_01425 NC_017362.1 275093 275347 D COG1145 Ferredoxin; putative 4Fe-4S ferredoxin-type protein 275093..275347 Helicobacter pylori Lithuania75 12351934 YP_005772443.1 CDS HPLT_01430 NC_017362.1 275357 276811 D COG0248 Exopolyphosphatase; guanosine pentaphosphate phosphohydrolase 275357..276811 Helicobacter pylori Lithuania75 12351935 YP_005772444.1 CDS HPLT_01435 NC_017362.1 276808 277818 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase-1 276808..277818 Helicobacter pylori Lithuania75 12351936 YP_005772445.1 CDS HPLT_01440 NC_017362.1 277815 278801 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 277815..278801 Helicobacter pylori Lithuania75 12351937 YP_005772446.1 CDS tgt NC_017362.1 278862 279977 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(278862..279977) Helicobacter pylori Lithuania75 12351938 YP_005772447.1 CDS HPLT_01450 NC_017362.1 280034 281470 D COG3400 Uncharacterized protein conserved in bacteria; hypothetical protein 280034..281470 Helicobacter pylori Lithuania75 12351939 YP_005772448.1 CDS aroB NC_017362.1 281475 282506 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 281475..282506 Helicobacter pylori Lithuania75 12351940 YP_005772449.1 CDS HPLT_01460 NC_017362.1 282497 284068 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 282497..284068 Helicobacter pylori Lithuania75 12351941 YP_005772450.1 CDS HPLT_01465 NC_017362.1 284065 285321 D COG0621 2-methylthioadenine synthetase; hypothetical protein 284065..285321 Helicobacter pylori Lithuania75 12351942 YP_005772451.1 CDS HPLT_01470 NC_017362.1 285308 286960 D COG0465 ATP-dependent Zn proteases; cell division protein (ftsH) 285308..286960 Helicobacter pylori Lithuania75 12351943 YP_005772452.1 CDS HPLT_01475 NC_017362.1 286963 287481 D hypothetical protein 286963..287481 Helicobacter pylori Lithuania75 12351944 YP_005772453.1 CDS HPLT_01480 NC_017362.1 287494 287967 D hypothetical protein 287494..287967 Helicobacter pylori Lithuania75 12351945 YP_005772454.1 CDS HPLT_01485 NC_017362.1 288016 296730 D vacuolating cytotoxin VacA-like protein 288016..296730 Helicobacter pylori Lithuania75 12351946 YP_005772455.1 CDS HPLT_01490 NC_017362.1 296778 297995 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 296778..297995 Helicobacter pylori Lithuania75 12351947 YP_005772456.1 CDS HPLT_01495 NC_017362.1 298000 298290 D COG1605 Chorismate mutase; hypothetical protein 298000..298290 Helicobacter pylori Lithuania75 12351948 YP_005772457.1 CDS HPLT_01510 NC_017362.1 299175 300860 D COG0147 Anthranilate/para-aminobenzoate synthases component I; Para-aminobenzoate (PABA)-synthetase 299175..300860 Helicobacter pylori Lithuania75 12351949 YP_005772458.1 CDS amiE NC_017362.1 301047 302066 D COG0388 Predicted amidohydrolase; acylamide amidohydrolase 301047..302066 Helicobacter pylori Lithuania75 12351950 YP_005772459.1 CDS flgL NC_017362.1 302148 304634 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(302148..304634) Helicobacter pylori Lithuania75 12351951 YP_005772460.1 CDS rplU NC_017362.1 304877 305191 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 304877..305191 Helicobacter pylori Lithuania75 12351952 YP_005772461.1 CDS rpmA NC_017362.1 305206 305472 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 305206..305472 Helicobacter pylori Lithuania75 12351953 YP_005772462.1 CDS HPLT_01535 NC_017362.1 305589 307238 D COG0747 ABC-type dipeptide transport system, periplasmic component; periplasmic dipeptide-binding protein 305589..307238 Helicobacter pylori Lithuania75 12351954 YP_005772463.1 CDS HPLT_01540 NC_017362.1 307249 308253 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide ABC transporter permease 307249..308253 Helicobacter pylori Lithuania75 12351955 YP_005772464.1 CDS HPLT_01545 NC_017362.1 308253 309110 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; ABC-type transport system, permease; putative dipeptide transporter protein 3; putative membrane protein 308253..309110 Helicobacter pylori Lithuania75 12351956 YP_005772465.1 CDS HPLT_01550 NC_017362.1 309122 309985 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; ABC-type transport system, ATP-binding protein; putative dipeptide transporter protein 4 309122..309985 Helicobacter pylori Lithuania75 12351957 YP_005772466.1 CDS HPLT_01555 NC_017362.1 309982 310788 D COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide transport system atp-binding protein 309982..310788 Helicobacter pylori Lithuania75 12351106 YP_005772467.1 CDS obgE NC_017362.1 310807 311889 D COG0536 Predicted GTPase; GTPase ObgE 310807..311889 Helicobacter pylori Lithuania75 12351107 YP_005772468.1 CDS HPLT_01565 NC_017362.1 311931 312926 D hypothetical protein 311931..312926 Helicobacter pylori Lithuania75 12351108 YP_005772469.1 CDS HPLT_01570 NC_017362.1 313175 313729 D hypothetical protein 313175..313729 Helicobacter pylori Lithuania75 12351109 YP_005772470.1 CDS HPLT_01575 NC_017362.1 313739 315031 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 313739..315031 Helicobacter pylori Lithuania75 12351110 YP_005772471.1 CDS HPLT_01580 NC_017362.1 315028 315300 D hypothetical protein 315028..315300 Helicobacter pylori Lithuania75 12351111 YP_005772472.1 CDS HPLT_01585 NC_017362.1 315316 315720 D hypothetical protein 315316..315720 Helicobacter pylori Lithuania75 12351112 YP_005772473.1 CDS HPLT_01590 NC_017362.1 315804 316682 D COG0388 Predicted amidohydrolase; hypothetical protein 315804..316682 Helicobacter pylori Lithuania75 12351113 YP_005772474.1 CDS HPLT_01595 NC_017362.1 316695 317576 D COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase 316695..317576 Helicobacter pylori Lithuania75 12351114 YP_005772475.1 CDS HPLT_01600 NC_017362.1 317630 318322 R typeII restriction enzyme complement(317630..318322) Helicobacter pylori Lithuania75 12351115 YP_005772476.1 CDS HPLT_01605 NC_017362.1 318324 319442 R COG0863 DNA modification methylase; DNA methylase complement(318324..319442) Helicobacter pylori Lithuania75 12351116 YP_005772477.1 CDS HPLT_01610 NC_017362.1 319538 319909 D hypothetical protein 319538..319909 Helicobacter pylori Lithuania75 12351117 YP_005772478.1 CDS HPLT_01615 NC_017362.1 319909 320871 D COG0523 Putative GTPases (G3E family); putative cobalamin syntheis protein, P47K family; putative ATP/GTP binding protein 319909..320871 Helicobacter pylori Lithuania75 12351118 YP_005772479.1 CDS HPLT_01620 NC_017362.1 320877 322022 R COG0477 Permeases of the major facilitator superfamily; nitrite extrusion protein complement(320877..322022) Helicobacter pylori Lithuania75 12351119 YP_005772480.1 CDS HPLT_01625 NC_017362.1 322177 322413 D hypothetical protein 322177..322413 Helicobacter pylori Lithuania75 12351120 YP_005772481.1 CDS HPLT_01630 NC_017362.1 322528 323283 R COG0748 Putative heme iron utilization protein; putative heme iron utilization protein complement(322528..323283) Helicobacter pylori Lithuania75 12351121 YP_005772482.1 CDS argS NC_017362.1 323344 324969 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(323344..324969) Helicobacter pylori Lithuania75 12351122 YP_005772483.1 CDS HPLT_01640 NC_017362.1 324972 325211 R COG1826 Sec-independent protein secretion pathway components; Sec-independent protein translocase protein tatA/E-like protein complement(324972..325211) Helicobacter pylori Lithuania75 12351123 YP_005772484.1 CDS gmk NC_017362.1 325282 325902 R COG0194 Guanylate kinase; guanylate kinase complement(325282..325902) Helicobacter pylori Lithuania75 12351124 YP_005772485.1 CDS HPLT_01650 NC_017362.1 325895 327424 R poly E-rich protein complement(325895..327424) Helicobacter pylori Lithuania75 12351125 YP_005772486.1 CDS HPLT_01655 NC_017362.1 327568 328110 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; nuclease NucT 327568..328110 Helicobacter pylori Lithuania75 12351126 YP_005772487.1 CDS HPLT_01660 NC_017362.1 328119 328856 R outer membrane protein HorC complement(328119..328856) Helicobacter pylori Lithuania75 12351127 YP_005772488.1 CDS flgH NC_017362.1 328988 329701 D COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 328988..329701 Helicobacter pylori Lithuania75 12351128 YP_005772489.1 CDS HPLT_01670 NC_017362.1 329725 330408 D COG1083 CMP-N-acetylneuraminic acid synthetase; putative acylneuraminate cytidylyltransferase 329725..330408 Helicobacter pylori Lithuania75 12351129 YP_005772490.1 CDS HPLT_01675 NC_017362.1 330399 331265 D COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase; putative acylneuraminate cytidylyltransferase 330399..331265 Helicobacter pylori Lithuania75 12351130 YP_005772491.1 CDS HPLT_01680 NC_017362.1 331262 331804 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; flagellar biosynthesis protein G 331262..331804 Helicobacter pylori Lithuania75 12351131 YP_005772492.1 CDS lpxK NC_017362.1 331737 332675 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(331737..332675) Helicobacter pylori Lithuania75 12351132 YP_005772493.1 CDS HPLT_01690 NC_017362.1 332672 333454 R COG0171 NAD synthase; NAD synthetase complement(332672..333454) Helicobacter pylori Lithuania75 12351133 YP_005772494.1 CDS HPLT_01695 NC_017362.1 333703 334695 D COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 333703..334695 Helicobacter pylori Lithuania75 12351135 YP_005772495.1 CDS HPLT_01700 NC_017362.1 334719 335525 D COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor 334719..335525 Helicobacter pylori Lithuania75 12351136 YP_005772496.1 CDS minE NC_017362.1 335522 335755 D COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 335522..335755 Helicobacter pylori Lithuania75 12351137 YP_005772497.1 CDS HPLT_01710 NC_017362.1 335762 336562 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; hypothetical protein 335762..336562 Helicobacter pylori Lithuania75 12351138 YP_005772498.1 CDS HPLT_01715 NC_017362.1 336559 336963 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 336559..336963 Helicobacter pylori Lithuania75 12351139 YP_005772499.1 CDS HPLT_01720 NC_017362.1 337092 337643 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 337092..337643 Helicobacter pylori Lithuania75 12351140 YP_005772500.1 CDS HPLT_01725 NC_017362.1 337759 338097 D hypothetical protein 337759..338097 Helicobacter pylori Lithuania75 12351141 YP_005772501.1 CDS HPLT_01730 NC_017362.1 338081 338647 D hypothetical protein 338081..338647 Helicobacter pylori Lithuania75 12351142 YP_005772502.1 CDS HPLT_01735 NC_017362.1 338677 339069 D lysozyme-like protein 338677..339069 Helicobacter pylori Lithuania75 12351143 YP_005772503.1 CDS HPLT_01740 NC_017362.1 339066 339329 D hypothetical protein 339066..339329 Helicobacter pylori Lithuania75 12351144 YP_005772504.1 CDS HPLT_01745 NC_017362.1 339344 339439 D hypothetical protein 339344..339439 Helicobacter pylori Lithuania75 12351145 YP_005772505.1 CDS HPLT_01750 NC_017362.1 339631 340014 D COG3326 Predicted membrane protein; hypothetical protein 339631..340014 Helicobacter pylori Lithuania75 12351146 YP_005772506.1 CDS HPLT_01755 NC_017362.1 340014 340799 D hypothetical protein 340014..340799 Helicobacter pylori Lithuania75 12351147 YP_005772507.1 CDS HPLT_01760 NC_017362.1 340789 341952 D hypothetical protein 340789..341952 Helicobacter pylori Lithuania75 12351148 YP_005772508.1 CDS HPLT_01765 NC_017362.1 341996 342892 R COG0564 Pseudouridylate synthases, 23S RNA-specific; pseudo uridine synthase D complement(341996..342892) Helicobacter pylori Lithuania75 12351149 YP_005772509.1 CDS HPLT_01770 NC_017362.1 342892 344442 R COG0608 Single-stranded DNA-specific exonuclease; ssDNA-specific exonuclease RecJ complement(342892..344442) Helicobacter pylori Lithuania75 12351150 YP_005772510.1 CDS pyrG NC_017362.1 344451 346067 R COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase complement(344451..346067) Helicobacter pylori Lithuania75 12351151 YP_005772511.1 CDS HPLT_01780 NC_017362.1 346322 346990 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 346322..346990 Helicobacter pylori Lithuania75 12351152 YP_005772512.1 CDS fliF NC_017362.1 347034 348737 D COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 347034..348737 Helicobacter pylori Lithuania75 12351153 YP_005772513.1 CDS fliG NC_017362.1 348755 349786 D COG1536 Flagellar motor switch protein; flagellar motor switch protein G 348755..349786 Helicobacter pylori Lithuania75 12351154 YP_005772514.1 CDS fliH NC_017362.1 349779 350549 D COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 349779..350549 Helicobacter pylori Lithuania75 12351155 YP_005772515.1 CDS HPLT_01800 NC_017362.1 350552 352402 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 350552..352402 Helicobacter pylori Lithuania75 12351156 YP_005772516.1 CDS HPLT_01805 NC_017362.1 352399 354207 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 352399..354207 Helicobacter pylori Lithuania75 12351157 YP_005772517.1 CDS HPLT_01810 NC_017362.1 354223 354978 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein 354223..354978 Helicobacter pylori Lithuania75 12351158 YP_005772518.1 CDS HPLT_01815 NC_017362.1 354981 355217 D hypothetical protein 354981..355217 Helicobacter pylori Lithuania75 12351159 YP_005772519.1 CDS HPLT_01820 NC_017362.1 355647 356456 R COG4786 Flagellar basal body rod protein; flagellar basal-body rod protein complement(355647..356456) Helicobacter pylori Lithuania75 12351160 YP_005772520.1 CDS HPLT_01825 NC_017362.1 356494 357795 R COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate permease complement(356494..357795) Helicobacter pylori Lithuania75 12351161 YP_005772521.1 CDS HPLT_01840 NC_017362.1 360539 362896 R COG3893 Inactivated superfamily I helicase; hypothetical protein complement(360539..362896) Helicobacter pylori Lithuania75 12351162 YP_005772522.1 CDS HPLT_01845 NC_017362.1 362893 364818 R COG0021 Transketolase; transketolase complement(362893..364818) Helicobacter pylori Lithuania75 12351163 YP_005772523.1 CDS HPLT_01850 NC_017362.1 364865 365707 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(364865..365707) Helicobacter pylori Lithuania75 12351164 YP_005772524.1 CDS HPLT_01855 NC_017362.1 365673 366380 R COG1189 Predicted rRNA methylase; hemolysin complement(365673..366380) Helicobacter pylori Lithuania75 12351165 YP_005772525.1 CDS HPLT_01860 NC_017362.1 366380 366895 R hypothetical protein complement(366380..366895) Helicobacter pylori Lithuania75 12351166 YP_005772526.1 CDS pyrB NC_017362.1 366962 367885 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 366962..367885 Helicobacter pylori Lithuania75 12351167 YP_005772527.1 CDS HPLT_01870 NC_017362.1 368181 368330 D outer membrane protein HofB 368181..368330 Helicobacter pylori Lithuania75 12351168 YP_005772528.1 CDS HPLT_01875 NC_017362.1 368558 369619 D outer membrane protein 368558..369619 Helicobacter pylori Lithuania75 12351169 YP_005772529.1 CDS HPLT_01880 NC_017362.1 369710 371365 D COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug resistance protein (msbA) 369710..371365 Helicobacter pylori Lithuania75 12351170 YP_005772530.1 CDS HPLT_01895 NC_017362.1 371985 372554 D COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes; archaeal Holliday junction resolvase and Mrr protein-like protein 371985..372554 Helicobacter pylori Lithuania75 12351171 YP_005772531.1 CDS HPLT_01900 NC_017362.1 372665 373849 D COG1106 Predicted ATPases; hypothetical protein 372665..373849 Helicobacter pylori Lithuania75 12351172 YP_005772532.1 CDS HPLT_01905 NC_017362.1 373842 374384 D hypothetical protein 373842..374384 Helicobacter pylori Lithuania75 12351173 YP_005772533.1 CDS HPLT_01910 NC_017362.1 374587 375582 D COG3376 High-affinity nickel permease; high affinity nickel transport protein 374587..375582 Helicobacter pylori Lithuania75 12351174 YP_005772534.1 CDS HPLT_01915 NC_017362.1 375586 376101 R hypothetical protein complement(375586..376101) Helicobacter pylori Lithuania75 12351175 YP_005772535.1 CDS HPLT_01930 NC_017362.1 377804 377965 D hypothetical protein 377804..377965 Helicobacter pylori Lithuania75 12351176 YP_005772536.1 CDS HPLT_01935 NC_017362.1 378213 378413 R COG2608 Copper chaperone; copper ion binding protein complement(378213..378413) Helicobacter pylori Lithuania75 12351177 YP_005772537.1 CDS HPLT_01940 NC_017362.1 378414 380639 R COG2217 Cation transport ATPase; Copper-transporting ATPase/P-type transporting ATPase; putative membrane protein complement(378414..380639) Helicobacter pylori Lithuania75 12351178 YP_005772538.1 CDS HPLT_01945 NC_017362.1 380636 381349 R COG1183 Phosphatidylserine synthase; CDP-diacylglycerol--serine O-phosphatidyltransferase (Phosphatidylserine synthase); putative membrane complement(380636..381349) Helicobacter pylori Lithuania75 12351179 YP_005772539.1 CDS HPLT_01950 NC_017362.1 381339 381593 R hypothetical protein complement(381339..381593) Helicobacter pylori Lithuania75 12351180 YP_005772540.1 CDS HPLT_01955 NC_017362.1 381596 383494 R COG0465 ATP-dependent Zn proteases; cell division protease FtsH complement(381596..383494) Helicobacter pylori Lithuania75 12351181 YP_005772541.1 CDS prmA NC_017362.1 383503 384495 R COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase complement(383503..384495) Helicobacter pylori Lithuania75 12351182 YP_005772542.1 CDS HPLT_01965 NC_017362.1 384496 384870 R COG0784 FOG: CheY-like receiver; chemotaxis protein complement(384496..384870) Helicobacter pylori Lithuania75 12351183 YP_005772543.1 CDS HPLT_01970 NC_017362.1 385160 385762 D Outer membrane protein HorD 385160..385762 Helicobacter pylori Lithuania75 12351184 YP_005772544.1 CDS HPLT_01975 NC_017362.1 385894 386301 R hypothetical protein complement(385894..386301) Helicobacter pylori Lithuania75 12351186 YP_005772545.1 CDS HPLT_01980 NC_017362.1 386304 386534 R hypothetical protein complement(386304..386534) Helicobacter pylori Lithuania75 12351187 YP_005772546.1 CDS gidB NC_017362.1 386528 387064 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(386528..387064) Helicobacter pylori Lithuania75 12351188 YP_005772547.1 CDS queA NC_017362.1 387061 388098 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(387061..388098) Helicobacter pylori Lithuania75 12351189 YP_005772548.1 CDS HPLT_01995 NC_017362.1 388099 388818 R COG0805 Sec-independent protein secretion pathway component TatC; twin arginine-targeting protein translocase TatC complement(388099..388818) Helicobacter pylori Lithuania75 12351190 YP_005772549.1 CDS HPLT_02000 NC_017362.1 388811 389293 R COG1826 Sec-independent protein secretion pathway components; sec-independent translocase complement(388811..389293) Helicobacter pylori Lithuania75 12351191 YP_005772550.1 CDS ruvB NC_017362.1 389361 390371 R COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB complement(389361..390371) Helicobacter pylori Lithuania75 12351192 YP_005772551.1 CDS panB NC_017362.1 390368 391180 R COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(390368..391180) Helicobacter pylori Lithuania75 12351193 YP_005772552.1 CDS HPLT_02015 NC_017362.1 391330 392052 D hypothetical protein 391330..392052 Helicobacter pylori Lithuania75 12351194 YP_005772553.1 CDS HPLT_02020 NC_017362.1 392042 392884 D COG1132 ABC-type multidrug transport system, ATPase and permease components; hypothetical protein 392042..392884 Helicobacter pylori Lithuania75 12351195 YP_005772554.1 CDS HPLT_02025 NC_017362.1 392896 393837 D hypothetical protein 392896..393837 Helicobacter pylori Lithuania75 12351196 YP_005772555.1 CDS HPLT_02030 NC_017362.1 393847 395169 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 393847..395169 Helicobacter pylori Lithuania75 12351197 YP_005772556.1 CDS minC NC_017362.1 395172 395759 D COG0850 Septum formation inhibitor; septum formation inhibitor 395172..395759 Helicobacter pylori Lithuania75 12351198 YP_005772557.1 CDS lpxC NC_017362.1 395756 396643 D COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 395756..396643 Helicobacter pylori Lithuania75 12351199 YP_005772558.1 CDS HPLT_02045 NC_017362.1 396665 397138 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 396665..397138 Helicobacter pylori Lithuania75 12351200 YP_005772559.1 CDS HPLT_02050 NC_017362.1 397192 398073 D COG0083 Homoserine kinase; homoserine kinase 397192..398073 Helicobacter pylori Lithuania75 12351201 YP_005772560.1 CDS HPLT_02055 NC_017362.1 398060 398314 D COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 398060..398314 Helicobacter pylori Lithuania75 12351202 YP_005772561.1 CDS infB NC_017362.1 398311 401151 D COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 398311..401151 Helicobacter pylori Lithuania75 12351203 YP_005772562.1 CDS rbfA NC_017362.1 401151 401486 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 401151..401486 Helicobacter pylori Lithuania75 12351204 YP_005772563.1 CDS HPLT_02070 NC_017362.1 401479 401919 D COG0779 Uncharacterized protein conserved in bacteria; Ribosome maturation factor rimP 401479..401919 Helicobacter pylori Lithuania75 12351205 YP_005772564.1 CDS HPLT_02075 NC_017362.1 402028 404016 R COG0365 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases; acetyl-CoA synthetase complement(402028..404016) Helicobacter pylori Lithuania75 12351206 YP_005772565.1 CDS HPLT_02080 NC_017362.1 404217 405329 D COG1408 Predicted phosphohydrolases; phosphodiesterase domain-containing protein 404217..405329 Helicobacter pylori Lithuania75 12351207 YP_005772566.1 CDS HPLT_02085 NC_017362.1 405711 406382 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 405711..406382 Helicobacter pylori Lithuania75 12351208 YP_005772567.1 CDS HPLT_02090 NC_017362.1 406895 407941 R COG2404 Predicted phosphohydrolase (DHH superfamily); hypothetical protein complement(406895..407941) Helicobacter pylori Lithuania75 12351209 YP_005772568.1 CDS flhA NC_017362.1 407969 410170 R COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA complement(407969..410170) Helicobacter pylori Lithuania75 12351210 YP_005772569.1 CDS rpsO NC_017362.1 410306 410578 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 410306..410578 Helicobacter pylori Lithuania75 12351211 YP_005772570.1 CDS HPLT_02105 NC_017362.1 410608 411897 D COG3307 Lipid A core - O-antigen ligase and related enzymes; hypothetical protein 410608..411897 Helicobacter pylori Lithuania75 12351212 YP_005772571.1 CDS HPLT_02110 NC_017362.1 412020 412523 D COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 412020..412523 Helicobacter pylori Lithuania75 12351213 YP_005772572.1 CDS HPLT_02115 NC_017362.1 412537 413610 D COG0006 Xaa-Pro aminopeptidase; X-Pro aminopeptidase 412537..413610 Helicobacter pylori Lithuania75 12351214 YP_005772573.1 CDS HPLT_02120 NC_017362.1 413607 414098 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 413607..414098 Helicobacter pylori Lithuania75 12351215 YP_005772574.1 CDS flhF NC_017362.1 414095 415471 D COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF 414095..415471 Helicobacter pylori Lithuania75 12351216 YP_005772575.1 CDS HPLT_02130 NC_017362.1 415468 416352 D COG0455 ATPases involved in chromosome partitioning; ATP-binding protein 415468..416352 Helicobacter pylori Lithuania75 12351217 YP_005772576.1 CDS HPLT_02135 NC_017362.1 416357 416671 D hypothetical protein 416357..416671 Helicobacter pylori Lithuania75 12351218 YP_005772577.1 CDS fliA NC_017362.1 416649 417416 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 416649..417416 Helicobacter pylori Lithuania75 12351219 YP_005772578.1 CDS fliM NC_017362.1 417409 418473 D COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 417409..418473 Helicobacter pylori Lithuania75 12351220 YP_005772579.1 CDS HPLT_02150 NC_017362.1 418477 419340 D COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliY 418477..419340 Helicobacter pylori Lithuania75 12351221 YP_005772580.1 CDS HPLT_02155 NC_017362.1 419370 419906 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 419370..419906 Helicobacter pylori Lithuania75 12351222 YP_005772581.1 CDS HPLT_02160 NC_017362.1 419903 420400 D COG4731 Uncharacterized protein conserved in bacteria; hypothetical protein 419903..420400 Helicobacter pylori Lithuania75 12351223 YP_005772582.1 CDS HPLT_02165 NC_017362.1 420420 420872 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein complement(420420..420872) Helicobacter pylori Lithuania75 12351224 YP_005772583.1 CDS HPLT_02170 NC_017362.1 421031 422206 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(421031..422206) Helicobacter pylori Lithuania75 12351225 YP_005772584.1 CDS HPLT_02175 NC_017362.1 422203 422574 R COG0789 Predicted transcriptional regulators; putative heat shock protein (hspR) complement(422203..422574) Helicobacter pylori Lithuania75 12351226 YP_005772585.1 CDS HPLT_02180 NC_017362.1 422584 423450 R COG2214 DnaJ-class molecular chaperone; co-chaperone-curved DNA binding protein A complement(422584..423450) Helicobacter pylori Lithuania75 12351227 YP_005772586.1 CDS HPLT_02185 NC_017362.1 423618 424868 D hypothetical protein 423618..424868 Helicobacter pylori Lithuania75 12351228 YP_005772587.1 CDS HPLT_02190 NC_017362.1 424973 425749 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); hypothetical protein complement(424973..425749) Helicobacter pylori Lithuania75 12351229 YP_005772588.1 CDS HPLT_02195 NC_017362.1 426066 426962 R COG0784 FOG: CheY-like receiver; response regulator complement(426066..426962) Helicobacter pylori Lithuania75 12351230 YP_005772589.1 CDS ispDF NC_017362.1 426984 428204 R COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(426984..428204) Helicobacter pylori Lithuania75 12351231 YP_005772590.1 CDS HPLT_02205 NC_017362.1 428226 429656 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; serine protease complement(428226..429656) Helicobacter pylori Lithuania75 12351232 YP_005772591.1 CDS HPLT_02210 NC_017362.1 429701 431143 R COG0833 Amino acid transporters; Transporter; putative amino-acid transporter, AAT family; putative membrane protein complement(429701..431143) Helicobacter pylori Lithuania75 12351233 YP_005772592.1 CDS HPLT_02215 NC_017362.1 431359 431898 R COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase complement(431359..431898) Helicobacter pylori Lithuania75 12351234 YP_005772593.1 CDS HPLT_02220 NC_017362.1 431895 432503 R hypothetical protein complement(431895..432503) Helicobacter pylori Lithuania75 12351235 YP_005772594.1 CDS HPLT_02225 NC_017362.1 432480 432587 D hypothetical protein 432480..432587 Helicobacter pylori Lithuania75 12351236 YP_005772595.1 CDS HPLT_02230 NC_017362.1 432513 433301 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase complement(432513..433301) Helicobacter pylori Lithuania75 12351237 YP_005772596.1 CDS HPLT_02235 NC_017362.1 433298 434200 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(433298..434200) Helicobacter pylori Lithuania75 12351238 YP_005772597.1 CDS HPLT_02240 NC_017362.1 434215 435549 R COG0612 Predicted Zn-dependent peptidases; putative zinc protease complement(434215..435549) Helicobacter pylori Lithuania75 12351239 YP_005772598.1 CDS HPLT_02245 NC_017362.1 435546 436601 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(435546..436601) Helicobacter pylori Lithuania75 12351240 YP_005772599.1 CDS HPLT_02250 NC_017362.1 436638 438665 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(436638..438665) Helicobacter pylori Lithuania75 12351241 YP_005772600.1 CDS HPLT_02255 NC_017362.1 439099 440271 R COG0732 Restriction endonuclease S subunits; type I restriction enzyme specificity subunit complement(439099..440271) Helicobacter pylori Lithuania75 12351243 YP_005772601.1 CDS HPLT_02260 NC_017362.1 440264 441895 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(440264..441895) Helicobacter pylori Lithuania75 12351244 YP_005772602.1 CDS HPLT_02265 NC_017362.1 441888 444170 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(441888..444170) Helicobacter pylori Lithuania75 12351245 YP_005772603.1 CDS HPLT_02270 NC_017362.1 444226 444360 D hypothetical protein 444226..444360 Helicobacter pylori Lithuania75 12351246 YP_005772604.1 CDS HPLT_02275 NC_017362.1 444344 445021 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein (hsdR) complement(444344..445021) Helicobacter pylori Lithuania75 12351247 YP_005772605.1 CDS HPLT_02280 NC_017362.1 445069 446964 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(445069..446964) Helicobacter pylori Lithuania75 12351248 YP_005772606.1 CDS HPLT_02285 NC_017362.1 446990 447757 R hypothetical protein complement(446990..447757) Helicobacter pylori Lithuania75 12351249 YP_005772607.1 CDS HPLT_02290 NC_017362.1 447767 448081 R hypothetical protein complement(447767..448081) Helicobacter pylori Lithuania75 12351250 YP_005772608.1 CDS HPLT_02295 NC_017362.1 448083 449570 R COG2048 Heterodisulfide reductase, subunit B; hypothetical protein complement(448083..449570) Helicobacter pylori Lithuania75 12351251 YP_005772609.1 CDS HPLT_02300 NC_017362.1 449582 450070 R hypothetical protein complement(449582..450070) Helicobacter pylori Lithuania75 12351252 YP_005772610.1 CDS HPLT_02305 NC_017362.1 450055 451791 R COG1164 Oligoendopeptidase F; oligoendopeptidase F complement(450055..451791) Helicobacter pylori Lithuania75 12351253 YP_005772611.1 CDS HPLT_02310 NC_017362.1 451889 453139 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein complement(451889..453139) Helicobacter pylori Lithuania75 12351254 YP_005772612.1 CDS HPLT_02315 NC_017362.1 453459 454019 R hypothetical protein complement(453459..454019) Helicobacter pylori Lithuania75 12351255 YP_005772613.1 CDS HPLT_02320 NC_017362.1 454245 454985 D COG0725 ABC-type molybdate transport system, periplasmic component; ABC-type transport system, periplasmic-binding protein; putative molybdate transporter; putative signal peptide 454245..454985 Helicobacter pylori Lithuania75 12351256 YP_005772614.1 CDS HPLT_02325 NC_017362.1 455007 455681 D COG4149 ABC-type molybdate transport system, permease component; molybdenum ABC transporter ModB 455007..455681 Helicobacter pylori Lithuania75 12351257 YP_005772615.1 CDS HPLT_02330 NC_017362.1 455678 456475 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; molybdenum ABC transporter ModD 455678..456475 Helicobacter pylori Lithuania75 12351258 YP_005772616.1 CDS gltX NC_017362.1 456589 457980 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(456589..457980) Helicobacter pylori Lithuania75 12351259 YP_005772617.1 CDS HPLT_02340 NC_017362.1 457991 458098 R hypothetical protein complement(457991..458098) Helicobacter pylori Lithuania75 12351260 YP_005772618.1 CDS HPLT_02345 NC_017362.1 458097 459191 D outer membrane protein 458097..459191 Helicobacter pylori Lithuania75 12351261 YP_005772619.1 CDS HPLT_02350 NC_017362.1 460802 461644 D COG0859 ADP-heptose:LPS heptosyltransferase; DD-heptosyltransferase 460802..461644 Helicobacter pylori Lithuania75 12351262 YP_005772620.1 CDS HPLT_02355 NC_017362.1 461690 463489 D COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein 461690..463489 Helicobacter pylori Lithuania75 12351263 YP_005772621.1 CDS HPLT_02360 NC_017362.1 463505 464434 D COG0338 Site-specific DNA methylase; type II adenine specific DNA methyltransferase 463505..464434 Helicobacter pylori Lithuania75 12351264 YP_005772622.1 CDS HPLT_02365 NC_017362.1 464437 465060 D type II restriction endonuclease 464437..465060 Helicobacter pylori Lithuania75 12351265 YP_005772623.1 CDS HPLT_02370 NC_017362.1 465152 466198 D COG0270 Site-specific DNA methylase; type II DNA modification enzyme (methyltransferase) 465152..466198 Helicobacter pylori Lithuania75 12351266 YP_005772624.1 CDS HPLT_02390 NC_017362.1 467189 468133 R COG0753 Catalase; catalase-like protein complement(467189..468133) Helicobacter pylori Lithuania75 12351267 YP_005772625.1 CDS HPLT_02395 NC_017362.1 468422 470008 D outer membrane protein HofC 468422..470008 Helicobacter pylori Lithuania75 12351268 YP_005772626.1 CDS HPLT_02400 NC_017362.1 470081 471478 D outer membrane protein HofD 470081..471478 Helicobacter pylori Lithuania75 12351269 YP_005772627.1 CDS HPLT_02405 NC_017362.1 471709 471909 R hypothetical protein complement(471709..471909) Helicobacter pylori Lithuania75 12351270 YP_005772628.1 CDS HPLT_02410 NC_017362.1 471931 472167 R hypothetical protein complement(471931..472167) Helicobacter pylori Lithuania75 12351271 YP_005772629.1 CDS HPLT_02415 NC_017362.1 472148 474652 D hypothetical protein 472148..474652 Helicobacter pylori Lithuania75 12351272 YP_005772630.1 CDS HPLT_02420 NC_017362.1 474717 475907 D hypothetical protein 474717..475907 Helicobacter pylori Lithuania75 12351273 YP_005772631.1 CDS HPLT_02425 NC_017362.1 476122 477258 R COG1226 Kef-type K+ transport systems, predicted NAD-binding component; putative potassium channel protein complement(476122..477258) Helicobacter pylori Lithuania75 12351274 YP_005772632.1 CDS rpmB NC_017362.1 477407 477595 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(477407..477595) Helicobacter pylori Lithuania75 12351275 YP_005772633.1 CDS HPLT_02435 NC_017362.1 477695 478531 R hypothetical protein complement(477695..478531) Helicobacter pylori Lithuania75 12351276 YP_005772634.1 CDS mraY NC_017362.1 478656 479717 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 478656..479717 Helicobacter pylori Lithuania75 12351277 YP_005772635.1 CDS murD NC_017362.1 479719 480987 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 479719..480987 Helicobacter pylori Lithuania75 12351278 YP_005772636.1 CDS HPLT_02450 NC_017362.1 480984 481244 R hypothetical protein complement(480984..481244) Helicobacter pylori Lithuania75 12351279 YP_005772637.1 CDS HPLT_02455 NC_017362.1 481234 481635 R COG0824 Predicted thioesterase; thioesterase family protein complement(481234..481635) Helicobacter pylori Lithuania75 12351280 YP_005772638.1 CDS HPLT_02460 NC_017362.1 481866 483194 D COG0733 Na+-dependent transporters of the SNF family; putative sodium-and chloride-dependent transporter; putative membrane protein 481866..483194 Helicobacter pylori Lithuania75 12351281 YP_005772639.1 CDS HPLT_02465 NC_017362.1 483205 484533 D COG0733 Na+-dependent transporters of the SNF family; sodium-and chloride-dependent transporter 483205..484533 Helicobacter pylori Lithuania75 12351282 YP_005772640.1 CDS HPLT_02470 NC_017362.1 484548 485615 D COG2829 Outer membrane phospholipase A; phospholipase A1 484548..485615 Helicobacter pylori Lithuania75 12351283 YP_005772641.1 CDS HPLT_02475 NC_017362.1 485672 486796 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 485672..486796 Helicobacter pylori Lithuania75 12351284 YP_005772642.1 CDS gyrB NC_017362.1 486809 489130 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 486809..489130 Helicobacter pylori Lithuania75 12351285 YP_005772643.1 CDS HPLT_02495 NC_017362.1 490156 490854 D hypothetical protein 490156..490854 Helicobacter pylori Lithuania75 12351286 YP_005772644.1 CDS HPLT_02500 NC_017362.1 491117 492328 D COG0739 Membrane proteins related to metalloendopeptidases; putative outer membrane protein 491117..492328 Helicobacter pylori Lithuania75 12351287 YP_005772645.1 CDS HPLT_02505 NC_017362.1 492328 492954 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 492328..492954 Helicobacter pylori Lithuania75 12351288 YP_005772646.1 CDS HPLT_02510 NC_017362.1 492947 494323 D hypothetical protein 492947..494323 Helicobacter pylori Lithuania75 12351289 YP_005772647.1 CDS HPLT_02515 NC_017362.1 494325 495704 D COG0277 FAD/FMN-containing dehydrogenases; glycolate oxidase subunit GlcD 494325..495704 Helicobacter pylori Lithuania75 12351290 YP_005772648.1 CDS HPLT_02520 NC_017362.1 495727 496491 D COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 495727..496491 Helicobacter pylori Lithuania75 12351291 YP_005772649.1 CDS HPLT_02525 NC_017362.1 496684 496845 R hypothetical protein complement(496684..496845) Helicobacter pylori Lithuania75 12351292 YP_005772650.1 CDS HPLT_02530 NC_017362.1 496922 497092 D urease-enhancing factor 496922..497092 Helicobacter pylori Lithuania75 12351293 YP_005772651.1 CDS HPLT_02535 NC_017362.1 497326 498771 R COG0174 Glutamine synthetase; glutamine synthetase complement(497326..498771) Helicobacter pylori Lithuania75 12351294 YP_005772652.1 CDS HPLT_02540 NC_017362.1 498904 500994 D COG1479 Uncharacterized conserved protein; hypothetical protein 498904..500994 Helicobacter pylori Lithuania75 12351295 YP_005772653.1 CDS rplI NC_017362.1 501057 501506 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 501057..501506 Helicobacter pylori Lithuania75 12351296 YP_005772654.1 CDS HPLT_02550 NC_017362.1 501510 502052 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease peptidase subunit 501510..502052 Helicobacter pylori Lithuania75 12351297 YP_005772655.1 CDS hslU NC_017362.1 502052 503383 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 502052..503383 Helicobacter pylori Lithuania75 12351298 YP_005772656.1 CDS era NC_017362.1 503383 504288 D COG1159 GTPase; GTP-binding protein Era 503383..504288 Helicobacter pylori Lithuania75 12351299 YP_005772657.1 CDS HPLT_02565 NC_017362.1 504285 505277 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 504285..505277 Helicobacter pylori Lithuania75 12351300 YP_005772658.1 CDS HPLT_02570 NC_017362.1 505361 506215 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(505361..506215) Helicobacter pylori Lithuania75 12351301 YP_005772659.1 CDS HPLT_02575 NC_017362.1 506387 506734 D cag pathogenicity island protein (cag1) 506387..506734 Helicobacter pylori Lithuania75 12351302 YP_005772660.1 CDS HPLT_02580 NC_017362.1 506950 507195 D hypothetical protein 506950..507195 Helicobacter pylori Lithuania75 12351303 YP_005772661.1 CDS HPLT_02585 NC_017362.1 507195 508640 D cag pathogenicity island protein 3 507195..508640 Helicobacter pylori Lithuania75 12351304 YP_005772662.1 CDS HPLT_02590 NC_017362.1 508650 509159 D cag pathogenicity island protein gamma 508650..509159 Helicobacter pylori Lithuania75 12351305 YP_005772663.1 CDS HPLT_02595 NC_017362.1 509278 511524 R COG3505 Type IV secretory pathway, VirD4 components; cag pathogenicity island protein 5 complement(509278..511524) Helicobacter pylori Lithuania75 12351306 YP_005772664.1 CDS HPLT_02600 NC_017362.1 511533 512525 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; cag pathogenicity island protein alpha complement(511533..512525) Helicobacter pylori Lithuania75 12351307 YP_005772665.1 CDS HPLT_02605 NC_017362.1 512530 513129 R cag pathogenicity island protein Z complement(512530..513129) Helicobacter pylori Lithuania75 12351308 YP_005772666.1 CDS HPLT_02610 NC_017362.1 513266 519031 R COG2948 Type IV secretory pathway, VirB10 components; cag pathogenicity island protein (cag7, cagY) complement(513266..519031) Helicobacter pylori Lithuania75 12351309 YP_005772667.1 CDS HPLT_02620 NC_017362.1 519046 520614 R COG3504 Type IV secretory pathway, VirB9 components; cag pathogenicity island protein X VirB9-like protein complement(519046..520614) Helicobacter pylori Lithuania75 12351310 YP_005772668.1 CDS HPLT_02625 NC_017362.1 520667 522274 R cag pathogenicity island protein W complement(520667..522274) Helicobacter pylori Lithuania75 12351311 YP_005772669.1 CDS HPLT_02630 NC_017362.1 522279 523037 R cag pathogenicity island protein V complement(522279..523037) Helicobacter pylori Lithuania75 12351312 YP_005772670.1 CDS HPLT_02635 NC_017362.1 523434 524084 D cag pathogenicity island protein U 523434..524084 Helicobacter pylori Lithuania75 12351313 YP_005772671.1 CDS HPLT_02640 NC_017362.1 524097 524939 D CAG pathogenicity island protein 12 524097..524939 Helicobacter pylori Lithuania75 12351314 YP_005772672.1 CDS HPLT_02645 NC_017362.1 525136 525735 R CAG pathogenicity island protein 13 complement(525136..525735) Helicobacter pylori Lithuania75 12351315 YP_005772673.1 CDS HPLT_02650 NC_017362.1 527753 528883 D cag pathogenicity island protein M 527753..528883 Helicobacter pylori Lithuania75 12351316 YP_005772674.1 CDS HPLT_02655 NC_017362.1 528898 529818 D cag pathogenicity island protein (cag17) 528898..529818 Helicobacter pylori Lithuania75 12351317 YP_005772675.1 CDS HPLT_02660 NC_017362.1 529900 530613 R cag pathogenicity island protein L complement(529900..530613) Helicobacter pylori Lithuania75 12351318 YP_005772676.1 CDS HPLT_02665 NC_017362.1 530610 531755 R cag pathogenicity island protein I complement(530610..531755) Helicobacter pylori Lithuania75 12351319 YP_005772677.1 CDS HPLT_02670 NC_017362.1 531766 532878 R COG0249 Mismatch repair ATPase (MutS family); cag pathogenicity island protein H complement(531766..532878) Helicobacter pylori Lithuania75 12351320 YP_005772678.1 CDS HPLT_02675 NC_017362.1 532895 533323 R cag pathogenicity island protein G complement(532895..533323) Helicobacter pylori Lithuania75 12351321 YP_005772679.1 CDS HPLT_02680 NC_017362.1 533378 534184 R cag pathogenicity island protein (cagF, cag22) complement(533378..534184) Helicobacter pylori Lithuania75 12351322 YP_005772680.1 CDS HPLT_02685 NC_017362.1 534186 537137 R COG3451 Type IV secretory pathway, VirB4 components; cag pathogenicity island protein E VirB4-like protein complement(534186..537137) Helicobacter pylori Lithuania75 12351323 YP_005772681.1 CDS HPLT_02690 NC_017362.1 537146 537769 R cag pathogenicity island protein D complement(537146..537769) Helicobacter pylori Lithuania75 12351324 YP_005772682.1 CDS HPLT_02695 NC_017362.1 537771 538118 R cag pathogenicity island protein C complement(537771..538118) Helicobacter pylori Lithuania75 12351325 YP_005772683.1 CDS HPLT_02700 NC_017362.1 538261 538488 R cag pathogenicity island protein B complement(538261..538488) Helicobacter pylori Lithuania75 12351326 YP_005772684.1 CDS HPLT_02705 NC_017362.1 538929 542471 D COG0419 ATPase involved in DNA repair; cytotoxin-associated protein A 538929..542471 Helicobacter pylori Lithuania75 12351327 YP_005772685.1 CDS HPLT_02720 NC_017362.1 542958 543725 R COG0796 Glutamate racemase; glutamate racemase complement(542958..543725) Helicobacter pylori Lithuania75 12351328 YP_005772686.1 CDS rho NC_017362.1 543764 545080 R COG1158 Transcription termination factor; transcription termination factor Rho complement(543764..545080) Helicobacter pylori Lithuania75 12351329 YP_005772687.1 CDS rpmE NC_017362.1 545347 545550 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 545347..545550 Helicobacter pylori Lithuania75 12351330 YP_005772688.1 CDS HPLT_02735 NC_017362.1 545575 546438 D COG0313 Predicted methyltransferases; putative methylase 545575..546438 Helicobacter pylori Lithuania75 12351331 YP_005772689.1 CDS HPLT_02740 NC_017362.1 546451 547134 D COG0566 rRNA methylases; RNA methyltransferase 546451..547134 Helicobacter pylori Lithuania75 12351332 YP_005772690.1 CDS HPLT_02745 NC_017362.1 547147 548121 D hypothetical protein 547147..548121 Helicobacter pylori Lithuania75 12351333 YP_005772691.1 CDS HPLT_02750 NC_017362.1 548118 548939 D COG1217 Predicted membrane GTPase involved in stress response; hypothetical protein 548118..548939 Helicobacter pylori Lithuania75 12351334 YP_005772692.1 CDS HPLT_02755 NC_017362.1 549011 549454 R hypothetical protein complement(549011..549454) Helicobacter pylori Lithuania75 12351335 YP_005772693.1 CDS HPLT_02760 NC_017362.1 549663 549842 D hypothetical protein 549663..549842 Helicobacter pylori Lithuania75 12351336 YP_005772694.1 CDS HPLT_02765 NC_017362.1 549919 550857 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(549919..550857) Helicobacter pylori Lithuania75 12351337 YP_005772695.1 CDS HPLT_02770 NC_017362.1 550880 552118 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(550880..552118) Helicobacter pylori Lithuania75 12351338 YP_005772696.1 CDS HPLT_02775 NC_017362.1 552134 552241 R hypothetical protein complement(552134..552241) Helicobacter pylori Lithuania75 12351339 YP_005772697.1 CDS acpP NC_017362.1 552430 552666 R COG0236 Acyl carrier protein; acyl carrier protein complement(552430..552666) Helicobacter pylori Lithuania75 12351340 YP_005772698.1 CDS fabG NC_017362.1 552897 553640 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(552897..553640) Helicobacter pylori Lithuania75 12351341 YP_005772699.1 CDS rpsU NC_017362.1 553679 553891 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(553679..553891) Helicobacter pylori Lithuania75 12351342 YP_005772700.1 CDS HPLT_02795 NC_017362.1 553992 555242 R hypothetical protein complement(553992..555242) Helicobacter pylori Lithuania75 12351343 YP_005772701.1 CDS HPLT_02800 NC_017362.1 555415 555660 D hypothetical protein 555415..555660 Helicobacter pylori Lithuania75 12351344 YP_005772702.1 CDS HPLT_02805 NC_017362.1 555683 556330 R COG3059 Predicted membrane protein; hypothetical protein complement(555683..556330) Helicobacter pylori Lithuania75 12351345 YP_005772703.1 CDS dapF NC_017362.1 556437 557258 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(556437..557258) Helicobacter pylori Lithuania75 12351346 YP_005772704.1 CDS HPLT_02815 NC_017362.1 557374 558420 D COG0628 Predicted permease; hypothetical protein 557374..558420 Helicobacter pylori Lithuania75 12351347 YP_005772705.1 CDS HPLT_02820 NC_017362.1 558550 559317 R radical SAM domain-containing protein complement(558550..559317) Helicobacter pylori Lithuania75 12351348 YP_005772706.1 CDS HPLT_02825 NC_017362.1 559452 560552 R COG0012 Predicted GTPase, probable translation factor; GTP-dependent nucleic acid-binding protein EngD complement(559452..560552) Helicobacter pylori Lithuania75 12351349 YP_005772707.1 CDS HPLT_02830 NC_017362.1 560554 562044 R COG0260 Leucyl aminopeptidase; leucyl aminopeptidase complement(560554..562044) Helicobacter pylori Lithuania75 12351350 YP_005772708.1 CDS HPLT_02835 NC_017362.1 562092 562670 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(562092..562670) Helicobacter pylori Lithuania75 12351351 YP_005772709.1 CDS HPLT_02840 NC_017362.1 562685 563224 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(562685..563224) Helicobacter pylori Lithuania75 12351352 YP_005772710.1 CDS HPLT_02845 NC_017362.1 563282 563614 R hypothetical protein complement(563282..563614) Helicobacter pylori Lithuania75 12351353 YP_005772711.1 CDS HPLT_02850 NC_017362.1 563659 564120 R COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B complement(563659..564120) Helicobacter pylori Lithuania75 12351354 YP_005772712.1 CDS HPLT_02855 NC_017362.1 564141 564839 R COG1994 Zn-dependent proteases; membrane protein complement(564141..564839) Helicobacter pylori Lithuania75 12351355 YP_005772713.1 CDS HPLT_02860 NC_017362.1 564848 565720 R COG0681 Signal peptidase I; signal peptidase I complement(564848..565720) Helicobacter pylori Lithuania75 12351356 YP_005772714.1 CDS HPLT_02865 NC_017362.1 565721 566593 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(565721..566593) Helicobacter pylori Lithuania75 12351357 YP_005772715.1 CDS HPLT_02870 NC_017362.1 566672 568708 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; hypothetical protein complement(566672..568708) Helicobacter pylori Lithuania75 12351358 YP_005772716.1 CDS HPLT_02875 NC_017362.1 568714 569160 R hypothetical protein complement(568714..569160) Helicobacter pylori Lithuania75 12351359 YP_005772717.1 CDS HPLT_02880 NC_017362.1 569147 569251 D hypothetical protein 569147..569251 Helicobacter pylori Lithuania75 12351360 YP_005772718.1 CDS HPLT_02885 NC_017362.1 569275 570207 R COG4692 Predicted neuraminidase (sialidase); hypothetical protein complement(569275..570207) Helicobacter pylori Lithuania75 12351361 YP_005772719.1 CDS HPLT_02890 NC_017362.1 570370 571389 R COG0418 Dihydroorotase; dihydroorotase complement(570370..571389) Helicobacter pylori Lithuania75 12351362 YP_005772720.1 CDS HPLT_02895 NC_017362.1 571393 572358 R COG0810 Periplasmic protein TonB, links inner and outer membranes; putative siderophore-mediated iron transport protein complement(571393..572358) Helicobacter pylori Lithuania75 12351363 YP_005772721.1 CDS HPLT_02900 NC_017362.1 572342 573223 R hypothetical protein complement(572342..573223) Helicobacter pylori Lithuania75 12351364 YP_005772722.1 CDS HPLT_02905 NC_017362.1 573220 573591 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein complement(573220..573591) Helicobacter pylori Lithuania75 12351365 YP_005772723.1 CDS HPLT_02910 NC_017362.1 573673 574323 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(573673..574323) Helicobacter pylori Lithuania75 12351366 YP_005772724.1 CDS HPLT_02915 NC_017362.1 574320 574556 R COG1918 Fe2+ transport system protein A; ferrous iron transport protein A complement(574320..574556) Helicobacter pylori Lithuania75 12351367 YP_005772725.1 CDS HPLT_02920 NC_017362.1 574558 577491 R hypothetical protein complement(574558..577491) Helicobacter pylori Lithuania75 12351368 YP_005772726.1 CDS HPLT_02925 NC_017362.1 577409 578398 D COG1559 Predicted periplasmic solute-binding protein; aminodeoxychorismate lyase (pabC) 577409..578398 Helicobacter pylori Lithuania75 12351369 YP_005772727.1 CDS oorD NC_017362.1 578584 578925 D COG1146 Ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 578584..578925 Helicobacter pylori Lithuania75 12351370 YP_005772728.1 CDS oorA NC_017362.1 578925 580052 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 578925..580052 Helicobacter pylori Lithuania75 12351371 YP_005772729.1 CDS oorB NC_017362.1 580054 580875 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 580054..580875 Helicobacter pylori Lithuania75 12351372 YP_005772730.1 CDS oorC NC_017362.1 580875 581435 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 580875..581435 Helicobacter pylori Lithuania75 12351373 YP_005772731.1 CDS HPLT_02950 NC_017362.1 581621 581785 D hypothetical protein 581621..581785 Helicobacter pylori Lithuania75 12351374 YP_005772732.1 CDS HPLT_02955 NC_017362.1 581794 583266 D COG1495 Disulfide bond formation protein DsbB; dsbb-like protein 581794..583266 Helicobacter pylori Lithuania75 12351375 YP_005772733.1 CDS HPLT_02960 NC_017362.1 583464 583583 R hypothetical protein complement(583464..583583) Helicobacter pylori Lithuania75 12351376 YP_005772734.1 CDS HPLT_02965 NC_017362.1 583740 584318 D tumor necrosis factor alpha-inducing protein 583740..584318 Helicobacter pylori Lithuania75 12351377 YP_005772735.1 CDS HPLT_02970 NC_017362.1 584321 586300 R COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 1A complement(584321..586300) Helicobacter pylori Lithuania75 12351378 YP_005772736.1 CDS HPLT_02975 NC_017362.1 586301 587422 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase complement(586301..587422) Helicobacter pylori Lithuania75 12351379 YP_005772737.1 CDS HPLT_02980 NC_017362.1 587445 588746 R COG0840 Methyl-accepting chemotaxis protein; Methyl-accepting chemotaxis transmembrane sensory protein (MCP-like protein) complement(587445..588746) Helicobacter pylori Lithuania75 12351380 YP_005772738.1 CDS HPLT_02985 NC_017362.1 588818 590320 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC-type transport system, permease and ATP-binding protein; putative membrane protein complement(588818..590320) Helicobacter pylori Lithuania75 12351381 YP_005772739.1 CDS HPLT_02990 NC_017362.1 590764 592296 D COG1344 Flagellin and related hook-associated proteins; flagellin A 590764..592296 Helicobacter pylori Lithuania75 12351382 YP_005772740.1 CDS HPLT_02995 NC_017362.1 592414 593070 D COG2231 Uncharacterized protein related to Endonuclease III; 3-methyladenine DNA glycosylase 592414..593070 Helicobacter pylori Lithuania75 12351383 YP_005772741.1 CDS HPLT_03000 NC_017362.1 593067 593684 D hypothetical protein 593067..593684 Helicobacter pylori Lithuania75 12351384 YP_005772742.1 CDS hemE NC_017362.1 593753 594772 D COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 593753..594772 Helicobacter pylori Lithuania75 12351385 YP_005772743.1 CDS HPLT_03010 NC_017362.1 594781 596214 D COG1538 Outer membrane protein; outer-membrane protein of the hefABC efflux system 594781..596214 Helicobacter pylori Lithuania75 12351386 YP_005772744.1 CDS HPLT_03015 NC_017362.1 596225 596929 D COG0845 Membrane-fusion protein; membrane fusion protein (mtrC) 596225..596929 Helicobacter pylori Lithuania75 12351387 YP_005772745.1 CDS HPLT_03020 NC_017362.1 596942 600028 D COG0841 Cation/multidrug efflux pump; cytoplasmic pump protein of the hefABC efflux system HefC 596942..600028 Helicobacter pylori Lithuania75 12351388 YP_005772746.1 CDS HPLT_03025 NC_017362.1 600025 600594 D COG0015 Adenylosuccinate lyase; hypothetical protein 600025..600594 Helicobacter pylori Lithuania75 12351389 YP_005772747.1 CDS HPLT_03030 NC_017362.1 600757 610323 D putative vacuolating cytotoxin VacA 600757..610323 Helicobacter pylori Lithuania75 12351390 YP_005772748.1 CDS HPLT_03035 NC_017362.1 610380 611135 R COG0842 ABC-type multidrug transport system, permease component; multidrug ABC transporter permease complement(610380..611135) Helicobacter pylori Lithuania75 12351391 YP_005772749.1 CDS HPLT_03040 NC_017362.1 611135 611836 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(611135..611836) Helicobacter pylori Lithuania75 12351392 YP_005772750.1 CDS HPLT_03045 NC_017362.1 611919 612056 R hypothetical protein complement(611919..612056) Helicobacter pylori Lithuania75 12351393 YP_005772751.1 CDS HPLT_03050 NC_017362.1 612143 612475 R hypothetical protein complement(612143..612475) Helicobacter pylori Lithuania75 12351394 YP_005772752.1 CDS ligA NC_017362.1 612600 614570 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(612600..614570) Helicobacter pylori Lithuania75 12351395 YP_005772753.1 CDS HPLT_03060 NC_017362.1 614648 615589 D COG0835 Chemotaxis signal transduction protein; putative chemotaxis protein 614648..615589 Helicobacter pylori Lithuania75 12351396 YP_005772754.1 CDS aspS NC_017362.1 615624 617357 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 615624..617357 Helicobacter pylori Lithuania75 12351397 YP_005772755.1 CDS adk NC_017362.1 617374 617949 D COG0563 Adenylate kinase and related kinases; adenylate kinase 617374..617949 Helicobacter pylori Lithuania75 12351398 YP_005772756.1 CDS HPLT_03075 NC_017362.1 617975 618526 D COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 617975..618526 Helicobacter pylori Lithuania75 12351399 YP_005772757.1 CDS HPLT_03080 NC_017362.1 618462 619259 D family 25 glycosyl transferase 618462..619259 Helicobacter pylori Lithuania75 12351400 YP_005772758.1 CDS HPLT_03085 NC_017362.1 619315 619836 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 619315..619836 Helicobacter pylori Lithuania75 12351401 YP_005772759.1 CDS HPLT_03090 NC_017362.1 619833 619961 R hypothetical protein complement(619833..619961) Helicobacter pylori Lithuania75 12351402 YP_005772760.1 CDS HPLT_03095 NC_017362.1 619984 622236 R COG1193 Mismatch repair ATPase (MutS family); recombination and DNA strand exchange inhibitor protein complement(619984..622236) Helicobacter pylori Lithuania75 12351403 YP_005772761.1 CDS HPLT_03100 NC_017362.1 622233 622619 R COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases; hypothetical protein complement(622233..622619) Helicobacter pylori Lithuania75 12351404 YP_005772762.1 CDS murC NC_017362.1 622619 623968 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(622619..623968) Helicobacter pylori Lithuania75 12351405 YP_005772763.1 CDS HPLT_03110 NC_017362.1 623961 625088 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(623961..625088) Helicobacter pylori Lithuania75 12351406 YP_005772764.1 CDS ispG NC_017362.1 625208 626287 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 625208..626287 Helicobacter pylori Lithuania75 12351407 YP_005772765.1 CDS HPLT_03120 NC_017362.1 626290 627495 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 626290..627495 Helicobacter pylori Lithuania75 12351408 YP_005772766.1 CDS HPLT_03125 NC_017362.1 627507 628565 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 627507..628565 Helicobacter pylori Lithuania75 12351409 YP_005772767.1 CDS HPLT_03130 NC_017362.1 628584 628676 D hypothetical protein 628584..628676 Helicobacter pylori Lithuania75 12351410 YP_005772768.1 CDS HPLT_03135 NC_017362.1 628721 630769 D COG1479 Uncharacterized conserved protein; hypothetical protein 628721..630769 Helicobacter pylori Lithuania75 12351411 YP_005772769.1 CDS HPLT_03140 NC_017362.1 630810 631394 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); modulator of drug activity B complement(630810..631394) Helicobacter pylori Lithuania75 12351412 YP_005772770.1 CDS HPLT_03145 NC_017362.1 631554 632708 D COG1740 Ni,Fe-hydrogenase I small subunit; Quinone-reactive Ni/Fe hydrogenase small subunit 631554..632708 Helicobacter pylori Lithuania75 12351413 YP_005772771.1 CDS HPLT_03150 NC_017362.1 632718 634454 D COG0374 Ni,Fe-hydrogenase I large subunit; nickel-dependent hydrogenase, large subunit 632718..634454 Helicobacter pylori Lithuania75 12351414 YP_005772772.1 CDS HPLT_03155 NC_017362.1 634467 635141 D COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 634467..635141 Helicobacter pylori Lithuania75 12351415 YP_005772773.1 CDS HPLT_03160 NC_017362.1 635138 635674 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase expression/formation protein 635138..635674 Helicobacter pylori Lithuania75 12351416 YP_005772774.1 CDS HPLT_03165 NC_017362.1 635676 637214 D hypothetical protein 635676..637214 Helicobacter pylori Lithuania75 12351417 YP_005772775.1 CDS HPLT_03170 NC_017362.1 637219 637632 R hypothetical protein complement(637219..637632) Helicobacter pylori Lithuania75 12351418 YP_005772776.1 CDS HPLT_03175 NC_017362.1 637761 638213 R hypothetical protein complement(637761..638213) Helicobacter pylori Lithuania75 12351419 YP_005772777.1 CDS HPLT_03180 NC_017362.1 638389 639312 D outer membrane protein HopH 638389..639312 Helicobacter pylori Lithuania75 12351420 YP_005772778.1 CDS HPLT_03185 NC_017362.1 639380 640066 R COG0603 Predicted PP-loop superfamily ATPase; trans-regulatory protein ExsB complement(639380..640066) Helicobacter pylori Lithuania75 12351421 YP_005772779.1 CDS HPLT_03190 NC_017362.1 640129 641337 D COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; putative polynucleotide adenylyltransferase; putative poly(A) polymerase 640129..641337 Helicobacter pylori Lithuania75 12351422 YP_005772780.1 CDS HPLT_03195 NC_017362.1 641351 641470 D hypothetical protein 641351..641470 Helicobacter pylori Lithuania75 12351423 YP_005772781.1 CDS HPLT_03200 NC_017362.1 641502 642359 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 3-hydroxyisobutyrate dehydrogenase 641502..642359 Helicobacter pylori Lithuania75 12351424 YP_005772782.1 CDS HPLT_03205 NC_017362.1 642361 643014 D COG0778 Nitroreductase; NAD(P)H-flavin oxidoreductase 642361..643014 Helicobacter pylori Lithuania75 12351425 YP_005772783.1 CDS HPLT_03210 NC_017362.1 643179 644498 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamylglutaminyl-tRNA synthetase 643179..644498 Helicobacter pylori Lithuania75 12351426 YP_005772784.1 CDS HPLT_03215 NC_017362.1 644495 644788 D COG0762 Predicted integral membrane protein; hypothetical protein 644495..644788 Helicobacter pylori Lithuania75 12351427 YP_005772785.1 CDS HPLT_03220 NC_017362.1 644797 646479 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); putative soluble lytic murein transglycosylase 644797..646479 Helicobacter pylori Lithuania75 12351428 YP_005772786.1 CDS HPLT_03225 NC_017362.1 646476 647297 D COG1210 UDP-glucose pyrophosphorylase; UTP-glucose-1-phosphate uridylyltransferase 646476..647297 Helicobacter pylori Lithuania75 12351429 YP_005772787.1 CDS HPLT_03230 NC_017362.1 647309 647716 D hypothetical protein 647309..647716 Helicobacter pylori Lithuania75 12351472 YP_005772788.1 CDS HPLT_03235 NC_017362.1 647719 648987 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 647719..648987 Helicobacter pylori Lithuania75 12351473 YP_005772789.1 CDS aspA NC_017362.1 649045 650451 D COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 649045..650451 Helicobacter pylori Lithuania75 12351474 YP_005772790.1 CDS HPLT_03245 NC_017362.1 650508 651086 D COG1573 Uracil-DNA glycosylase; hypothetical protein 650508..651086 Helicobacter pylori Lithuania75 12351475 YP_005772791.1 CDS HPLT_03250 NC_017362.1 651095 652285 R alpha-1,3-fucosyltransferase complement(651095..652285) Helicobacter pylori Lithuania75 12351476 YP_005772792.1 CDS HPLT_03255 NC_017362.1 652285 652386 D hypothetical protein 652285..652386 Helicobacter pylori Lithuania75 12351477 YP_005772793.1 CDS HPLT_03260 NC_017362.1 652366 652989 R COG0560 Phosphoserine phosphatase; phosphoserine phosphatase complement(652366..652989) Helicobacter pylori Lithuania75 12351478 YP_005772794.1 CDS HPLT_03265 NC_017362.1 653005 653508 R COG1528 Ferritin-like protein; nonheme iron-containing ferritin complement(653005..653508) Helicobacter pylori Lithuania75 12351479 YP_005772795.1 CDS HPLT_03270 NC_017362.1 653805 654887 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 653805..654887 Helicobacter pylori Lithuania75 12351480 YP_005772796.1 CDS HPLT_03275 NC_017362.1 655060 657711 D COG4775 Outer membrane protein/protective antigen OMA87; protective surface antigen D15 655060..657711 Helicobacter pylori Lithuania75 12351481 YP_005772797.1 CDS HPLT_03280 NC_017362.1 657713 658774 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 657713..658774 Helicobacter pylori Lithuania75 12351482 YP_005772798.1 CDS HPLT_03285 NC_017362.1 658780 660078 D COG0612 Predicted Zn-dependent peptidases; processing protease (ymxG) 658780..660078 Helicobacter pylori Lithuania75 12351483 YP_005772799.1 CDS gatB NC_017362.1 660078 661502 D COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 660078..661502 Helicobacter pylori Lithuania75 12351484 YP_005772800.1 CDS HPLT_03295 NC_017362.1 661502 662761 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 661502..662761 Helicobacter pylori Lithuania75 12351485 YP_005772801.1 CDS HPLT_03300 NC_017362.1 662772 663788 D hypothetical protein 662772..663788 Helicobacter pylori Lithuania75 12351486 YP_005772802.1 CDS rnhA NC_017362.1 663775 664206 D COG0328 Ribonuclease HI; ribonuclease H 663775..664206 Helicobacter pylori Lithuania75 12351487 YP_005772803.1 CDS rnc NC_017362.1 664218 664937 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 664218..664937 Helicobacter pylori Lithuania75 12351488 YP_005772804.1 CDS HPLT_03315 NC_017362.1 664934 666031 D COG0082 Chorismate synthase; chorismate synthase 664934..666031 Helicobacter pylori Lithuania75 12351489 YP_005772805.1 CDS HPLT_03320 NC_017362.1 666068 666583 D hypothetical protein 666068..666583 Helicobacter pylori Lithuania75 12351490 YP_005772806.1 CDS HPLT_03325 NC_017362.1 666583 667956 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 666583..667956 Helicobacter pylori Lithuania75 12351491 YP_005772807.1 CDS HPLT_03330 NC_017362.1 667953 669254 D COG0247 Fe-S oxidoreductase; putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) 667953..669254 Helicobacter pylori Lithuania75 12351492 YP_005772808.1 CDS HPLT_03345 NC_017362.1 674203 675015 D outer membrane protein HorF 674203..675015 Helicobacter pylori Lithuania75 12351493 YP_005772809.1 CDS HPLT_03350 NC_017362.1 675174 676346 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase 675174..676346 Helicobacter pylori Lithuania75 12351494 YP_005772810.1 CDS HPLT_03365 NC_017362.1 677650 678741 D COG0582 Integrase; integrase-recombinase protein 677650..678741 Helicobacter pylori Lithuania75 12351495 YP_005772811.1 CDS HPLT_03370 NC_017362.1 678787 679311 R COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(678787..679311) Helicobacter pylori Lithuania75 12351496 YP_005772812.1 CDS HPLT_03375 NC_017362.1 679312 680079 R COG0730 Predicted permeases; hypothetical protein complement(679312..680079) Helicobacter pylori Lithuania75 12351497 YP_005772813.1 CDS HPLT_03380 NC_017362.1 680191 681138 R COG0673 Predicted dehydrogenases and related proteins; putative oxidoreductase complement(680191..681138) Helicobacter pylori Lithuania75 12351498 YP_005772814.1 CDS HPLT_03385 NC_017362.1 681200 683566 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(681200..683566) Helicobacter pylori Lithuania75 12351499 YP_005772815.1 CDS HPLT_03390 NC_017362.1 683737 684246 R hypothetical protein complement(683737..684246) Helicobacter pylori Lithuania75 12351500 YP_005772816.1 CDS HPLT_03395 NC_017362.1 684286 684651 R hypothetical protein complement(684286..684651) Helicobacter pylori Lithuania75 12351501 YP_005772817.1 CDS glmU NC_017362.1 684853 686154 R COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(684853..686154) Helicobacter pylori Lithuania75 12351502 YP_005772818.1 CDS HPLT_03405 NC_017362.1 686111 686203 D flagellar biosynthesis protein FliP 686111..686203 Helicobacter pylori Lithuania75 12351503 YP_005772819.1 CDS fliP NC_017362.1 686236 686982 D COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 686236..686982 Helicobacter pylori Lithuania75 12351504 YP_005772820.1 CDS HPLT_03415 NC_017362.1 687021 689324 R COG4772 Outer membrane receptor for Fe3+-dicitrate; iron(III) dicitrate transport protein complement(687021..689324) Helicobacter pylori Lithuania75 12351505 YP_005772821.1 CDS HPLT_03420 NC_017362.1 689573 691501 R COG0370 Fe2+ transport system protein B; iron(II) transport protein complement(689573..691501) Helicobacter pylori Lithuania75 12351506 YP_005772822.1 CDS HPLT_03425 NC_017362.1 691644 692456 D COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 691644..692456 Helicobacter pylori Lithuania75 12351507 YP_005772823.1 CDS HPLT_03430 NC_017362.1 692510 693721 D COG0863 DNA modification methylase; putative type II cytosine specific methyltransferase 692510..693721 Helicobacter pylori Lithuania75 12351508 YP_005772824.1 CDS HPLT_03435 NC_017362.1 693724 694596 D putative type II restriction enzyme 693724..694596 Helicobacter pylori Lithuania75 12351509 YP_005772825.1 CDS HPLT_03440 NC_017362.1 694730 695089 D COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 694730..695089 Helicobacter pylori Lithuania75 12351510 YP_005772826.1 CDS HPLT_03445 NC_017362.1 695370 696545 D COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 695370..696545 Helicobacter pylori Lithuania75 12351511 YP_005772827.1 CDS HPLT_03450 NC_017362.1 696556 697254 D COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; succinyl-CoA-transferase subunit A 696556..697254 Helicobacter pylori Lithuania75 12351512 YP_005772828.1 CDS HPLT_03455 NC_017362.1 697251 697874 D COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; succinyl-CoA-transferase subunit B 697251..697874 Helicobacter pylori Lithuania75 12351513 YP_005772829.1 CDS HPLT_03460 NC_017362.1 697893 699257 D COG2031 Short chain fatty acids transporter; short-chain fatty acids transporter 697893..699257 Helicobacter pylori Lithuania75 12351514 YP_005772830.1 CDS HPLT_03465 NC_017362.1 699382 700383 D COG3528 Uncharacterized protein conserved in bacteria; outer membrane protein 699382..700383 Helicobacter pylori Lithuania75 12351515 YP_005772831.1 CDS HPLT_03470 NC_017362.1 700631 702772 D COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A 700631..702772 Helicobacter pylori Lithuania75 12351516 YP_005772832.1 CDS HPLT_03475 NC_017362.1 702784 705081 D COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit; acetone carboxylase subunit alpha 702784..705081 Helicobacter pylori Lithuania75 12351517 YP_005772833.1 CDS HPLT_03480 NC_017362.1 705098 705598 D COG4647 Acetone carboxylase, gamma subunit; hypothetical protein 705098..705598 Helicobacter pylori Lithuania75 12351518 YP_005772834.1 CDS HPLT_03485 NC_017362.1 705859 706014 R hypothetical protein complement(705859..706014) Helicobacter pylori Lithuania75 12351519 YP_005772835.1 CDS HPLT_03490 NC_017362.1 705929 706957 D hypothetical protein 705929..706957 Helicobacter pylori Lithuania75 12351520 YP_005772836.1 CDS HPLT_03495 NC_017362.1 706950 707336 D COG0818 Diacylglycerol kinase; diacylglycerol kinase 706950..707336 Helicobacter pylori Lithuania75 12351521 YP_005772837.1 CDS HPLT_03500 NC_017362.1 707352 709838 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 707352..709838 Helicobacter pylori Lithuania75 12351522 YP_005772838.1 CDS HPLT_03505 NC_017362.1 709838 710311 D hypothetical protein 709838..710311 Helicobacter pylori Lithuania75 12351523 YP_005772839.1 CDS HPLT_03510 NC_017362.1 710308 711453 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; Transcriptional activator 710308..711453 Helicobacter pylori Lithuania75 12351524 YP_005772840.1 CDS uvrA NC_017362.1 712606 715431 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(712606..715431) Helicobacter pylori Lithuania75 12351525 YP_005772841.1 CDS HPLT_03530 NC_017362.1 715595 716416 D outer membrane protein HopE 715595..716416 Helicobacter pylori Lithuania75 12351526 YP_005772842.1 CDS mraW NC_017362.1 716597 717523 D COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; S-adenosyl-methyltransferase MraW 716597..717523 Helicobacter pylori Lithuania75 12351527 YP_005772843.1 CDS HPLT_03540 NC_017362.1 717543 717887 D hypothetical protein 717543..717887 Helicobacter pylori Lithuania75 12351528 YP_005772844.1 CDS HPLT_03545 NC_017362.1 718089 718286 R hypothetical protein complement(718089..718286) Helicobacter pylori Lithuania75 12351529 YP_005772845.1 CDS HPLT_03550 NC_017362.1 718343 719245 D COG1912 Uncharacterized conserved protein; hypothetical protein 718343..719245 Helicobacter pylori Lithuania75 12351530 YP_005772846.1 CDS HPLT_03565 NC_017362.1 721659 722879 D COG1896 Predicted hydrolases of HD superfamily; hypothetical protein 721659..722879 Helicobacter pylori Lithuania75 12351531 YP_005772847.1 CDS HPLT_03570 NC_017362.1 722977 723675 R outer membrane protein (omp13) complement(722977..723675) Helicobacter pylori Lithuania75 12351532 YP_005772848.1 CDS HPLT_03575 NC_017362.1 723887 725131 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(723887..725131) Helicobacter pylori Lithuania75 12351533 YP_005772849.1 CDS HPLT_03580 NC_017362.1 725134 725856 R COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein complement(725134..725856) Helicobacter pylori Lithuania75 12351534 YP_005772850.1 CDS HPLT_03585 NC_017362.1 725869 726270 R COG0802 Predicted ATPase or kinase; hypothetical protein complement(725869..726270) Helicobacter pylori Lithuania75 12351535 YP_005772851.1 CDS HPLT_03590 NC_017362.1 726267 728006 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(726267..728006) Helicobacter pylori Lithuania75 12351536 YP_005772852.1 CDS HPLT_03595 NC_017362.1 728075 728707 R COG1279 Lysine efflux permease; hypothetical protein complement(728075..728707) Helicobacter pylori Lithuania75 12351537 YP_005772853.1 CDS HPLT_03600 NC_017362.1 728972 729394 D hypothetical protein 728972..729394 Helicobacter pylori Lithuania75 12351538 YP_005772854.1 CDS HPLT_03605 NC_017362.1 729422 729883 D hypothetical protein 729422..729883 Helicobacter pylori Lithuania75 12351539 YP_005772855.1 CDS HPLT_03610 NC_017362.1 730203 732167 D outer membrane protein SabA 730203..732167 Helicobacter pylori Lithuania75 12351540 YP_005772856.1 CDS HPLT_03615 NC_017362.1 732243 733574 R COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter complement(732243..733574) Helicobacter pylori Lithuania75 12351541 YP_005772857.1 CDS HPLT_03620 NC_017362.1 733703 734695 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 733703..734695 Helicobacter pylori Lithuania75 12351542 YP_005772858.1 CDS HPLT_03625 NC_017362.1 734835 736664 R outer membrane protein SabB complement(734835..736664) Helicobacter pylori Lithuania75 12351543 YP_005772859.1 CDS HPLT_03630 NC_017362.1 736950 737867 R outer membrane protein complement(736950..737867) Helicobacter pylori Lithuania75 12351544 YP_005772860.1 CDS HPLT_03635 NC_017362.1 737837 738823 R COG0042 tRNA-dihydrouridine synthase; putative transcriptional regulator complement(737837..738823) Helicobacter pylori Lithuania75 12351545 YP_005772861.1 CDS HPLT_03640 NC_017362.1 738914 739930 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase complement(738914..739930) Helicobacter pylori Lithuania75 12351546 YP_005772862.1 CDS HPLT_03645 NC_017362.1 739966 741033 R hypothetical protein complement(739966..741033) Helicobacter pylori Lithuania75 12351547 YP_005772863.1 CDS HPLT_03650 NC_017362.1 741042 741347 R hypothetical protein complement(741042..741347) Helicobacter pylori Lithuania75 12351548 YP_005772864.1 CDS HPLT_03655 NC_017362.1 741268 741396 D hypothetical protein 741268..741396 Helicobacter pylori Lithuania75 12351549 YP_005772865.1 CDS HPLT_03660 NC_017362.1 741439 743139 R COG0218 Predicted GTPase; hypothetical protein complement(741439..743139) Helicobacter pylori Lithuania75 12351550 YP_005772866.1 CDS HPLT_03665 NC_017362.1 743136 743792 R hypothetical protein complement(743136..743792) Helicobacter pylori Lithuania75 12351551 YP_005772867.1 CDS HPLT_03675 NC_017362.1 744513 744698 R hypothetical protein complement(744513..744698) Helicobacter pylori Lithuania75 12351552 YP_005772868.1 CDS HPLT_03685 NC_017362.1 745078 746397 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(745078..746397) Helicobacter pylori Lithuania75 12351634 YP_005772869.1 CDS HPLT_03690 NC_017362.1 746399 746860 R COG2236 Predicted phosphoribosyltransferases; putative nucleotide phosphoribosyltransferase complement(746399..746860) Helicobacter pylori Lithuania75 12351635 YP_005772870.1 CDS HPLT_03695 NC_017362.1 746869 747978 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; putative aminotransferase complement(746869..747978) Helicobacter pylori Lithuania75 12351636 YP_005772871.1 CDS HPLT_03700 NC_017362.1 748127 748606 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidyl glycerophosphatase A 748127..748606 Helicobacter pylori Lithuania75 12351637 YP_005772872.1 CDS ddl NC_017362.1 748683 749726 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 748683..749726 Helicobacter pylori Lithuania75 12351638 YP_005772873.1 CDS HPLT_03710 NC_017362.1 749726 750451 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 749726..750451 Helicobacter pylori Lithuania75 12351639 YP_005772874.1 CDS HPLT_03715 NC_017362.1 750438 751919 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl-D-alanyl ligase 750438..751919 Helicobacter pylori Lithuania75 12351640 YP_005772875.1 CDS HPLT_03720 NC_017362.1 751929 752414 D COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; putative HIT family protein 751929..752414 Helicobacter pylori Lithuania75 12351641 YP_005772876.1 CDS HPLT_03725 NC_017362.1 752479 753435 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 752479..753435 Helicobacter pylori Lithuania75 12351642 YP_005772877.1 CDS HPLT_03730 NC_017362.1 753508 754653 R COG0772 Bacterial cell division membrane protein; Rod shape-determining protein RodA; putative membrane protein complement(753508..754653) Helicobacter pylori Lithuania75 12351644 YP_005772878.1 CDS HPLT_03755 NC_017362.1 756019 757002 D COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 756019..757002 Helicobacter pylori Lithuania75 12351645 YP_005772879.1 CDS HPLT_03760 NC_017362.1 756965 758212 D COG3401 Fibronectin type 3 domain-containing protein; hypothetical protein 756965..758212 Helicobacter pylori Lithuania75 12351646 YP_005772880.1 CDS HPLT_03765 NC_017362.1 758223 759404 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 758223..759404 Helicobacter pylori Lithuania75 12351647 YP_005772881.1 CDS HPLT_03770 NC_017362.1 759401 760072 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; cell division protein FtsE 759401..760072 Helicobacter pylori Lithuania75 12351648 YP_005772882.1 CDS HPLT_03775 NC_017362.1 760059 760865 D COG2177 Cell division protein; ABC-type transport system, permease component; putative cell division protein FtsX; putative membrane protein 760059..760865 Helicobacter pylori Lithuania75 12351649 YP_005772883.1 CDS HPLT_03780 NC_017362.1 760858 762060 D COG4942 Membrane-bound metallopeptidase; hypothetical protein 760858..762060 Helicobacter pylori Lithuania75 12351650 YP_005772884.1 CDS HPLT_03785 NC_017362.1 762153 762512 D COG1334 Uncharacterized flagellar protein FlaG; flagellar protein FlaG 762153..762512 Helicobacter pylori Lithuania75 12351651 YP_005772885.1 CDS fliD NC_017362.1 762529 764586 D COG1345 Flagellar capping protein; flagellar capping protein 762529..764586 Helicobacter pylori Lithuania75 12351652 YP_005772886.1 CDS fliS NC_017362.1 764627 765007 D COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 764627..765007 Helicobacter pylori Lithuania75 12351653 YP_005772887.1 CDS HPLT_03800 NC_017362.1 764994 765233 D hypothetical protein 764994..765233 Helicobacter pylori Lithuania75 12351654 YP_005772888.1 CDS HPLT_03805 NC_017362.1 765325 765972 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; hypothetical protein 765325..765972 Helicobacter pylori Lithuania75 12351655 YP_005772889.1 CDS HPLT_03810 NC_017362.1 765959 766102 D hypothetical protein 765959..766102 Helicobacter pylori Lithuania75 12351656 YP_005772890.1 CDS HPLT_03815 NC_017362.1 766106 766984 D COG0388 Predicted amidohydrolase; carbon-nitrogen hydrolase 766106..766984 Helicobacter pylori Lithuania75 12351657 YP_005772891.1 CDS HPLT_03820 NC_017362.1 767111 768424 D COG2056 Predicted permease; hypothetical protein 767111..768424 Helicobacter pylori Lithuania75 12351658 YP_005772892.1 CDS HPLT_03825 NC_017362.1 768487 769740 D COG0534 Na+-driven multidrug efflux pump; hypothetical protein 768487..769740 Helicobacter pylori Lithuania75 12351659 YP_005772893.1 CDS HPLT_03830 NC_017362.1 769747 771336 R COG1418 Predicted HD superfamily hydrolase; phosphodiesterase complement(769747..771336) Helicobacter pylori Lithuania75 12351660 YP_005772894.1 CDS HPLT_03835 NC_017362.1 771236 771883 R COG0212 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein complement(771236..771883) Helicobacter pylori Lithuania75 12351661 YP_005772895.1 CDS HPLT_03840 NC_017362.1 772008 772565 D hypothetical protein 772008..772565 Helicobacter pylori Lithuania75 12351662 YP_005772896.1 CDS HPLT_03845 NC_017362.1 772573 773454 D COG0552 Signal recognition particle GTPase; cell division protein (ftsY) 772573..773454 Helicobacter pylori Lithuania75 12351663 YP_005772897.1 CDS HPLT_03850 NC_017362.1 773463 773777 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(773463..773777) Helicobacter pylori Lithuania75 12351664 YP_005772898.1 CDS HPLT_03855 NC_017362.1 773804 774784 R hypothetical protein complement(773804..774784) Helicobacter pylori Lithuania75 12351665 YP_005772899.1 CDS HPLT_03860 NC_017362.1 774794 775087 R hypothetical protein complement(774794..775087) Helicobacter pylori Lithuania75 12351666 YP_005772900.1 CDS HPLT_03865 NC_017362.1 775099 776649 R hypothetical protein complement(775099..776649) Helicobacter pylori Lithuania75 12351667 YP_005772901.1 CDS moaA NC_017362.1 776891 777856 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(776891..777856) Helicobacter pylori Lithuania75 12351668 YP_005772902.1 CDS HPLT_03875 NC_017362.1 777942 778547 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 777942..778547 Helicobacter pylori Lithuania75 12351669 YP_005772903.1 CDS flhB NC_017362.1 778540 778725 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 778540..778725 Helicobacter pylori Lithuania75 12351670 YP_005772904.1 CDS flhB NC_017362.1 778707 779615 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 778707..779615 Helicobacter pylori Lithuania75 12351671 YP_005772905.1 CDS HPLT_03890 NC_017362.1 779704 780441 R hypothetical protein complement(779704..780441) Helicobacter pylori Lithuania75 12351672 YP_005772906.1 CDS HPLT_03895 NC_017362.1 780460 781782 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(780460..781782) Helicobacter pylori Lithuania75 12351673 YP_005772907.1 CDS HPLT_03900 NC_017362.1 781789 782880 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; 2-nitropropane dioxygenase complement(781789..782880) Helicobacter pylori Lithuania75 12351674 YP_005772908.1 CDS HPLT_03905 NC_017362.1 782897 784105 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(782897..784105) Helicobacter pylori Lithuania75 12351675 YP_005772909.1 CDS HPLT_03910 NC_017362.1 784129 786456 R COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; Guanosine-3', 5'-bis(diphosphate)3'-pyrophosphohydrolase / Guanosine-3',5'-bis(diphosphate) synthetase II complement(784129..786456) Helicobacter pylori Lithuania75 12351676 YP_005772910.1 CDS HPLT_03915 NC_017362.1 786443 786667 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(786443..786667) Helicobacter pylori Lithuania75 12351677 YP_005772911.1 CDS pyrH NC_017362.1 786709 787431 R COG0528 Uridylate kinase; uridylate kinase complement(786709..787431) Helicobacter pylori Lithuania75 12351678 YP_005772912.1 CDS HPLT_03925 NC_017362.1 787541 788224 R COG1427 Predicted periplasmic solute-binding protein; hypothetical protein complement(787541..788224) Helicobacter pylori Lithuania75 12351679 YP_005772913.1 CDS HPLT_03930 NC_017362.1 788355 790913 D COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 788355..790913 Helicobacter pylori Lithuania75 12351680 YP_005772914.1 CDS HPLT_03935 NC_017362.1 790995 791261 D hypothetical protein 790995..791261 Helicobacter pylori Lithuania75 12351681 YP_005772915.1 CDS HPLT_03940 NC_017362.1 791376 791531 R hypothetical protein complement(791376..791531) Helicobacter pylori Lithuania75 12351682 YP_005772916.1 CDS HPLT_03945 NC_017362.1 791525 792814 D hypothetical protein 791525..792814 Helicobacter pylori Lithuania75 12351683 YP_005772917.1 CDS HPLT_03950 NC_017362.1 792908 794275 D Outermembrane protein HofE 792908..794275 Helicobacter pylori Lithuania75 12351684 YP_005772918.1 CDS HPLT_03955 NC_017362.1 794282 794809 R hypothetical protein complement(794282..794809) Helicobacter pylori Lithuania75 12351685 YP_005772919.1 CDS lolA NC_017362.1 795302 795856 R COG2834 Outer membrane lipoprotein-sorting protein; outer-membrane lipoprotein carrier protein complement(795302..795856) Helicobacter pylori Lithuania75 12351686 YP_005772920.1 CDS HPLT_03965 NC_017362.1 796004 798601 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 796004..798601 Helicobacter pylori Lithuania75 12351687 YP_005772921.1 CDS HPLT_03970 NC_017362.1 798591 799823 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; hypothetical protein 798591..799823 Helicobacter pylori Lithuania75 12351688 YP_005772922.1 CDS HPLT_03975 NC_017362.1 800102 801601 D outer membrane protein HofF 800102..801601 Helicobacter pylori Lithuania75 12351689 YP_005772923.1 CDS HPLT_03980 NC_017362.1 801676 801822 D hypothetical protein 801676..801822 Helicobacter pylori Lithuania75 12351690 YP_005772924.1 CDS HPLT_03995 NC_017362.1 802510 804570 R COG2217 Cation transport ATPase; cadmium-transporting ATPase complement(802510..804570) Helicobacter pylori Lithuania75 12351691 YP_005772925.1 CDS HPLT_04000 NC_017362.1 804595 806115 R COG0606 Predicted ATPase with chaperone activity; Mg chelatase-related protein; putative ComM protein complement(804595..806115) Helicobacter pylori Lithuania75 12351692 YP_005772926.1 CDS def NC_017362.1 806121 806645 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(806121..806645) Helicobacter pylori Lithuania75 12351693 YP_005772927.1 CDS clpP NC_017362.1 806650 807237 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(806650..807237) Helicobacter pylori Lithuania75 12351694 YP_005772928.1 CDS tig NC_017362.1 807258 808613 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(807258..808613) Helicobacter pylori Lithuania75 12351695 YP_005772929.1 CDS HPLT_04020 NC_017362.1 808725 809561 R outer membrane protein HorG complement(808725..809561) Helicobacter pylori Lithuania75 12351696 YP_005772930.1 CDS HPLT_04025 NC_017362.1 809594 810376 R flagellar sheath adhesin complement(809594..810376) Helicobacter pylori Lithuania75 12351697 YP_005772931.1 CDS moaC NC_017362.1 810495 810971 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(810495..810971) Helicobacter pylori Lithuania75 12351698 YP_005772932.1 CDS mogA NC_017362.1 810981 811511 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA complement(810981..811511) Helicobacter pylori Lithuania75 12351699 YP_005772933.1 CDS HPLT_04040 NC_017362.1 811524 811961 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin converting factor subunit 2 complement(811524..811961) Helicobacter pylori Lithuania75 12351700 YP_005772934.1 CDS HPLT_04045 NC_017362.1 811962 812183 R COG1977 Molybdopterin converting factor, small subunit; molybdopterin converting factor, subunit 1 (moaD) complement(811962..812183) Helicobacter pylori Lithuania75 12351701 YP_005772935.1 CDS ribA NC_017362.1 812256 812834 R COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II complement(812256..812834) Helicobacter pylori Lithuania75 12351702 YP_005772936.1 CDS HPLT_04055 NC_017362.1 813635 813772 R hypothetical protein complement(813635..813772) Helicobacter pylori Lithuania75 12351703 YP_005772937.1 CDS HPLT_04060 NC_017362.1 813851 814885 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(813851..814885) Helicobacter pylori Lithuania75 12351704 YP_005772938.1 CDS HPLT_04065 NC_017362.1 814941 815054 D hypothetical protein 814941..815054 Helicobacter pylori Lithuania75 12351705 YP_005772939.1 CDS HPLT_04070 NC_017362.1 815074 815925 R COG3306 Glycosyltransferase involved in LPS biosynthesis; lipooligosaccharide 5G8 epitope biosynthesis-associated protein complement(815074..815925) Helicobacter pylori Lithuania75 12351706 YP_005772940.1 CDS HPLT_04075 NC_017362.1 816007 816627 D COG1451 Predicted metal-dependent hydrolase; metalloprotease 816007..816627 Helicobacter pylori Lithuania75 12351707 YP_005772941.1 CDS HPLT_04080 NC_017362.1 816638 819016 R COG4772 Outer membrane receptor for Fe3+-dicitrate; iron (III) dicitrate transport protein complement(816638..819016) Helicobacter pylori Lithuania75 12351708 YP_005772942.1 CDS acpS NC_017362.1 819213 819569 R COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase complement(819213..819569) Helicobacter pylori Lithuania75 12351709 YP_005772943.1 CDS fliL NC_017362.1 819576 820127 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(819576..820127) Helicobacter pylori Lithuania75 12351710 YP_005772944.1 CDS HPLT_04095 NC_017362.1 820136 820738 R COG0742 N6-adenine-specific methylase; hypothetical protein complement(820136..820738) Helicobacter pylori Lithuania75 12351711 YP_005772945.1 CDS HPLT_04100 NC_017362.1 820717 821043 R hypothetical protein complement(820717..821043) Helicobacter pylori Lithuania75 12351712 YP_005772946.1 CDS HPLT_04105 NC_017362.1 821503 822513 R COG1565 Uncharacterized conserved protein; hypothetical protein complement(821503..822513) Helicobacter pylori Lithuania75 12351713 YP_005772947.1 CDS HPLT_04110 NC_017362.1 822646 823263 D COG0491 Zn-dependent hydrolases, including glyoxylases; putative hydrolase 822646..823263 Helicobacter pylori Lithuania75 12351714 YP_005772948.1 CDS HPLT_04115 NC_017362.1 823264 824031 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamine biosynthesis protein 823264..824031 Helicobacter pylori Lithuania75 12351796 YP_005772949.1 CDS HPLT_04120 NC_017362.1 824047 824820 D COG1291 Flagellar motor component; flagellar motor protein MotA 824047..824820 Helicobacter pylori Lithuania75 12351797 YP_005772950.1 CDS motB NC_017362.1 824823 825596 D COG1360 Flagellar motor protein; flagellar motor protein MotB 824823..825596 Helicobacter pylori Lithuania75 12351798 YP_005772951.1 CDS HPLT_04130 NC_017362.1 825602 826039 D hypothetical protein 825602..826039 Helicobacter pylori Lithuania75 12351799 YP_005772952.1 CDS HPLT_04145 NC_017362.1 827774 828424 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; osmoprotection ATP-binding protein 827774..828424 Helicobacter pylori Lithuania75 12351800 YP_005772953.1 CDS HPLT_04150 NC_017362.1 828598 829059 D COG0018 Arginyl-tRNA synthetase; hypothetical protein 828598..829059 Helicobacter pylori Lithuania75 12351801 YP_005772954.1 CDS uvrC NC_017362.1 829060 830844 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 829060..830844 Helicobacter pylori Lithuania75 12351802 YP_005772955.1 CDS HPLT_04160 NC_017362.1 830855 832120 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 830855..832120 Helicobacter pylori Lithuania75 12351803 YP_005772956.1 CDS HPLT_04165 NC_017362.1 832120 832464 D COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 832120..832464 Helicobacter pylori Lithuania75 12351804 YP_005772957.1 CDS HPLT_04170 NC_017362.1 832553 832873 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 832553..832873 Helicobacter pylori Lithuania75 12351805 YP_005772958.1 CDS HPLT_04175 NC_017362.1 832878 833813 D COG0492 Thioredoxin reductase; thioredoxin reductase 832878..833813 Helicobacter pylori Lithuania75 12351806 YP_005772959.1 CDS HPLT_04180 NC_017362.1 834150 834971 D COG3306 Glycosyltransferase involved in LPS biosynthesis; beta-1,4-galactosyltransferase 834150..834971 Helicobacter pylori Lithuania75 12351807 YP_005772960.1 CDS HPLT_04185 NC_017362.1 835215 835463 R COG0724 RNA-binding proteins (RRM domain); Nucleotide binding protein complement(835215..835463) Helicobacter pylori Lithuania75 12351808 YP_005772961.1 CDS HPLT_04190 NC_017362.1 835617 835751 D hypothetical protein 835617..835751 Helicobacter pylori Lithuania75 12351809 YP_005772962.1 CDS HPLT_04195 NC_017362.1 835786 836466 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(835786..836466) Helicobacter pylori Lithuania75 12351810 YP_005772963.1 CDS HPLT_04200 NC_017362.1 836588 838033 R COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase complement(836588..838033) Helicobacter pylori Lithuania75 12351811 YP_005772964.1 CDS gatA NC_017362.1 838043 839404 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(838043..839404) Helicobacter pylori Lithuania75 12351812 YP_005772965.1 CDS coaE NC_017362.1 839464 840054 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(839464..840054) Helicobacter pylori Lithuania75 12351813 YP_005772966.1 CDS speE NC_017362.1 840056 840844 R COG0421 Spermidine synthase; spermidine synthase complement(840056..840844) Helicobacter pylori Lithuania75 12351814 YP_005772967.1 CDS HPLT_04220 NC_017362.1 840929 841807 R hypothetical protein complement(840929..841807) Helicobacter pylori Lithuania75 12351815 YP_005772968.1 CDS engA NC_017362.1 841884 843269 D COG1160 Predicted GTPases; GTP-binding protein EngA 841884..843269 Helicobacter pylori Lithuania75 12351816 YP_005772969.1 CDS HPLT_04230 NC_017362.1 843411 843695 D COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 843411..843695 Helicobacter pylori Lithuania75 12351817 YP_005772970.1 CDS HPLT_04235 NC_017362.1 844374 844979 D COG3018 Uncharacterized protein conserved in bacteria; hypothetical protein 844374..844979 Helicobacter pylori Lithuania75 12351819 YP_005772971.1 CDS HPLT_04240 NC_017362.1 844999 845616 D hypothetical protein 844999..845616 Helicobacter pylori Lithuania75 12351820 YP_005772972.1 CDS HPLT_04255 NC_017362.1 847379 848380 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; bifunctional UDP-glcnac C6 dehydratase / C5 epimerase 847379..848380 Helicobacter pylori Lithuania75 12351821 YP_005772973.1 CDS HPLT_04260 NC_017362.1 848377 849654 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 848377..849654 Helicobacter pylori Lithuania75 12351822 YP_005772974.1 CDS HPLT_04265 NC_017362.1 849654 850391 D hypothetical protein 849654..850391 Helicobacter pylori Lithuania75 12351823 YP_005772975.1 CDS thiE NC_017362.1 850423 851085 R COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(850423..851085) Helicobacter pylori Lithuania75 12351824 YP_005772976.1 CDS HPLT_04275 NC_017362.1 851078 851887 R COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; thiamine biosynthesis protein complement(851078..851887) Helicobacter pylori Lithuania75 12351825 YP_005772977.1 CDS HPLT_04280 NC_017362.1 851884 852663 R COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase complement(851884..852663) Helicobacter pylori Lithuania75 12351826 YP_005772978.1 CDS HPLT_04295 NC_017362.1 855749 856138 R COG0732 Restriction endonuclease S subunits; putative type I restriction-modification enzyme specificity subunit S complement(855749..856138) Helicobacter pylori Lithuania75 12351827 YP_005772979.1 CDS HPLT_04300 NC_017362.1 856338 857045 R COG0732 Restriction endonuclease S subunits; type I restriction-modification methylase complement(856338..857045) Helicobacter pylori Lithuania75 12351828 YP_005772980.1 CDS HPLT_04315 NC_017362.1 858833 859516 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 858833..859516 Helicobacter pylori Lithuania75 12351829 YP_005772981.1 CDS HPLT_04320 NC_017362.1 859747 860682 R COG2958 Uncharacterized protein conserved in bacteria; Excinuclease ATPase subunit complement(859747..860682) Helicobacter pylori Lithuania75 12351830 YP_005772982.1 CDS HPLT_04325 NC_017362.1 860679 862280 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(860679..862280) Helicobacter pylori Lithuania75 12351831 YP_005772983.1 CDS HPLT_04330 NC_017362.1 862478 863455 D COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 862478..863455 Helicobacter pylori Lithuania75 12351832 YP_005772984.1 CDS HPLT_04335 NC_017362.1 863439 863564 D hypothetical protein 863439..863564 Helicobacter pylori Lithuania75 12351833 YP_005772985.1 CDS HPLT_04340 NC_017362.1 863574 864152 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(863574..864152) Helicobacter pylori Lithuania75 12351834 YP_005772986.1 CDS HPLT_04345 NC_017362.1 864145 865536 R COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; ADP-heptose synthase complement(864145..865536) Helicobacter pylori Lithuania75 12351835 YP_005772987.1 CDS HPLT_04350 NC_017362.1 865533 866525 R COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-glyceromanno-heptose 6-epimerase complement(865533..866525) Helicobacter pylori Lithuania75 12351836 YP_005772988.1 CDS HPLT_04355 NC_017362.1 866534 867058 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(866534..867058) Helicobacter pylori Lithuania75 12351837 YP_005772989.1 CDS HPLT_04360 NC_017362.1 867045 867803 R COG2836 Uncharacterized conserved protein; hypothetical protein complement(867045..867803) Helicobacter pylori Lithuania75 12351838 YP_005772990.1 CDS HPLT_04365 NC_017362.1 867794 868465 R COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase complement(867794..868465) Helicobacter pylori Lithuania75 12351839 YP_005772991.1 CDS HPLT_04370 NC_017362.1 868470 870074 R plasminogen-binding protein PgbB complement(868470..870074) Helicobacter pylori Lithuania75 12351840 YP_005772992.1 CDS HPLT_04375 NC_017362.1 870079 870735 R hypothetical protein complement(870079..870735) Helicobacter pylori Lithuania75 12351841 YP_005772993.1 CDS dut NC_017362.1 870732 871169 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(870732..871169) Helicobacter pylori Lithuania75 12351842 YP_005772994.1 CDS greA NC_017362.1 871159 871653 R COG0782 Transcription elongation factor; transcription elongation factor GreA complement(871159..871653) Helicobacter pylori Lithuania75 12351843 YP_005772995.1 CDS HPLT_04390 NC_017362.1 871694 872776 R COG0763 Lipid A disaccharide synthetase; ipid-A-disaccharide synthase complement(871694..872776) Helicobacter pylori Lithuania75 12351844 YP_005772996.1 CDS HPLT_04395 NC_017362.1 872776 873237 R hypothetical protein complement(872776..873237) Helicobacter pylori Lithuania75 12351845 YP_005772997.1 CDS hypA NC_017362.1 873244 873597 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(873244..873597) Helicobacter pylori Lithuania75 12351846 YP_005772998.1 CDS flgE NC_017362.1 873656 875812 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(873656..875812) Helicobacter pylori Lithuania75 12351847 YP_005772999.1 CDS HPLT_04410 NC_017362.1 876022 876756 R COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(876022..876756) Helicobacter pylori Lithuania75 12351848 YP_005773000.1 CDS HPLT_04415 NC_017362.1 877109 877438 D COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate uptake protein 877109..877438 Helicobacter pylori Lithuania75 12351849 YP_005773001.1 CDS HPLT_04420 NC_017362.1 877496 877711 R hypothetical protein complement(877496..877711) Helicobacter pylori Lithuania75 12351850 YP_005773002.1 CDS HPLT_04425 NC_017362.1 877795 878670 R hypothetical protein complement(877795..878670) Helicobacter pylori Lithuania75 12351851 YP_005773003.1 CDS HPLT_04430 NC_017362.1 878815 880332 R COG0753 Catalase; catalase complement(878815..880332) Helicobacter pylori Lithuania75 12351852 YP_005773004.1 CDS HPLT_04435 NC_017362.1 880653 883028 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 880653..883028 Helicobacter pylori Lithuania75 12351853 YP_005773005.1 CDS ruvC NC_017362.1 883029 883502 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(883029..883502) Helicobacter pylori Lithuania75 12351854 YP_005773006.1 CDS HPLT_04445 NC_017362.1 883634 884359 D COG1432 Uncharacterized conserved protein; hypothetical protein 883634..884359 Helicobacter pylori Lithuania75 12351855 YP_005773007.1 CDS HPLT_04450 NC_017362.1 884462 884572 R hypothetical protein complement(884462..884572) Helicobacter pylori Lithuania75 12351856 YP_005773008.1 CDS HPLT_04455 NC_017362.1 884597 884995 R hypothetical protein complement(884597..884995) Helicobacter pylori Lithuania75 12351857 YP_005773009.1 CDS HPLT_04460 NC_017362.1 885118 885504 R hypothetical protein complement(885118..885504) Helicobacter pylori Lithuania75 12351858 YP_005773010.1 CDS ruvA NC_017362.1 886182 886733 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(886182..886733) Helicobacter pylori Lithuania75 12351859 YP_005773011.1 CDS HPLT_04470 NC_017362.1 886759 888603 R hypothetical protein complement(886759..888603) Helicobacter pylori Lithuania75 12351860 YP_005773012.1 CDS HPLT_04475 NC_017362.1 888695 890155 D COG0728 Uncharacterized membrane protein, putative virulence factor; virulence factor MviN 888695..890155 Helicobacter pylori Lithuania75 12351861 YP_005773013.1 CDS cysS NC_017362.1 890156 891553 D COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 890156..891553 Helicobacter pylori Lithuania75 12351862 YP_005773014.1 CDS HPLT_04485 NC_017362.1 891535 891678 D hypothetical protein 891535..891678 Helicobacter pylori Lithuania75 12351863 YP_005773015.1 CDS HPLT_04490 NC_017362.1 891839 895720 D vacuolating cytotoxin 891839..895720 Helicobacter pylori Lithuania75 12351864 YP_005773016.1 CDS HPLT_04495 NC_017362.1 895840 896850 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(895840..896850) Helicobacter pylori Lithuania75 12351865 YP_005773017.1 CDS HPLT_04500 NC_017362.1 897023 897790 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; iron compounds ABC transporter ATP-binding protein complement(897023..897790) Helicobacter pylori Lithuania75 12351866 YP_005773018.1 CDS HPLT_04505 NC_017362.1 897790 898770 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron(III) dicitrate ABC transporter, permease protein (fecD) complement(897790..898770) Helicobacter pylori Lithuania75 12351867 YP_005773019.1 CDS HPLT_04510 NC_017362.1 898763 899617 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); short-chain oxidoreductase complement(898763..899617) Helicobacter pylori Lithuania75 12351868 YP_005773020.1 CDS HPLT_04515 NC_017362.1 899757 900281 D COG1607 Acyl-CoA hydrolase; hypothetical protein 899757..900281 Helicobacter pylori Lithuania75 12351869 YP_005773021.1 CDS HPLT_04520 NC_017362.1 900274 900423 D hypothetical protein 900274..900423 Helicobacter pylori Lithuania75 12351870 YP_005773022.1 CDS HPLT_04525 NC_017362.1 900533 900634 R hypothetical protein complement(900533..900634) Helicobacter pylori Lithuania75 12351871 YP_005773023.1 CDS HPLT_04530 NC_017362.1 900775 900930 R hypothetical protein complement(900775..900930) Helicobacter pylori Lithuania75 12351872 YP_005773024.1 CDS HPLT_04535 NC_017362.1 901126 901266 R hypothetical protein complement(901126..901266) Helicobacter pylori Lithuania75 12351873 YP_005773025.1 CDS HPLT_04540 NC_017362.1 901330 903261 R outer membrane protein HopT/BabB complement(901330..903261) Helicobacter pylori Lithuania75 12351874 YP_005773026.1 CDS HPLT_04545 NC_017362.1 903278 903439 R outer membrane protein (omp28) complement(903278..903439) Helicobacter pylori Lithuania75 12351875 YP_005773027.1 CDS HPLT_04550 NC_017362.1 904055 904684 D hypothetical protein 904055..904684 Helicobacter pylori Lithuania75 12351959 YP_005773028.1 CDS HPLT_04555 NC_017362.1 904635 905747 R COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD complement(904635..905747) Helicobacter pylori Lithuania75 12351960 YP_005773029.1 CDS HPLT_04560 NC_017362.1 905753 905989 R COG0298 Hydrogenase maturation factor; hydrogenase expression/formation protein complement(905753..905989) Helicobacter pylori Lithuania75 12351961 YP_005773030.1 CDS HPLT_04565 NC_017362.1 905989 906717 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase/urease nickel incorporation protein hypB complement(905989..906717) Helicobacter pylori Lithuania75 12351962 YP_005773031.1 CDS HPLT_04570 NC_017362.1 906829 906957 R hypothetical protein complement(906829..906957) Helicobacter pylori Lithuania75 12351963 YP_005773032.1 CDS HPLT_04575 NC_017362.1 906968 907267 R COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; hypothetical protein complement(906968..907267) Helicobacter pylori Lithuania75 12351964 YP_005773033.1 CDS HPLT_04580 NC_017362.1 907365 907721 R COG0282 Acetate kinase; acetate kinase complement(907365..907721) Helicobacter pylori Lithuania75 12351965 YP_005773034.1 CDS HPLT_04585 NC_017362.1 907684 907893 R COG0282 Acetate kinase; acetate kinase complement(907684..907893) Helicobacter pylori Lithuania75 12351966 YP_005773035.1 CDS HPLT_04590 NC_017362.1 907948 908424 R COG0280 Phosphotransacetylase; phosphate acetyltransferase complement(907948..908424) Helicobacter pylori Lithuania75 12351967 YP_005773036.1 CDS HPLT_04595 NC_017362.1 908495 909313 R COG0280 Phosphotransacetylase; phosphotransacetylase complement(908495..909313) Helicobacter pylori Lithuania75 12351968 YP_005773037.1 CDS HPLT_04600 NC_017362.1 909318 909446 R phosphotransacetylase complement(909318..909446) Helicobacter pylori Lithuania75 12351969 YP_005773038.1 CDS HPLT_04605 NC_017362.1 909695 911251 D hypothetical protein 909695..911251 Helicobacter pylori Lithuania75 12351970 YP_005773039.1 CDS flgD NC_017362.1 911302 912252 D COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 911302..912252 Helicobacter pylori Lithuania75 12351971 YP_005773040.1 CDS flgE NC_017362.1 912249 914066 D COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 912249..914066 Helicobacter pylori Lithuania75 12351972 YP_005773041.1 CDS HPLT_04620 NC_017362.1 914118 914747 D putative restriction endonuclease 914118..914747 Helicobacter pylori Lithuania75 12351973 YP_005773042.1 CDS HPLT_04625 NC_017362.1 914735 915868 D COG0827 Adenine-specific DNA methylase; adenine specific DNA methyltransferase 914735..915868 Helicobacter pylori Lithuania75 12351974 YP_005773043.1 CDS HPLT_04630 NC_017362.1 915877 917904 D COG0210 Superfamily I DNA and RNA helicases; Rep helicase 915877..917904 Helicobacter pylori Lithuania75 12351975 YP_005773044.1 CDS HPLT_04635 NC_017362.1 918098 918253 R hypothetical protein complement(918098..918253) Helicobacter pylori Lithuania75 12351976 YP_005773045.1 CDS HPLT_04640 NC_017362.1 918443 919999 D Outer membrane porin and adhesin HopC; putative signal peptide 918443..919999 Helicobacter pylori Lithuania75 12351977 YP_005773046.1 CDS HPLT_04645 NC_017362.1 920021 921622 D outer membrane protein HopB 920021..921622 Helicobacter pylori Lithuania75 12351978 YP_005773047.1 CDS HPLT_04650 NC_017362.1 921984 922094 R hypothetical protein complement(921984..922094) Helicobacter pylori Lithuania75 12351979 YP_005773048.1 CDS HPLT_04655 NC_017362.1 922425 923969 R COG1190 Lysyl-tRNA synthetase (class II); hypothetical protein complement(922425..923969) Helicobacter pylori Lithuania75 12351980 YP_005773049.1 CDS HPLT_04660 NC_017362.1 924215 926656 R COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein complement(924215..926656) Helicobacter pylori Lithuania75 12351981 YP_005773050.1 CDS HPLT_04665 NC_017362.1 926833 927264 R hypothetical protein complement(926833..927264) Helicobacter pylori Lithuania75 12351982 YP_005773051.1 CDS carB NC_017362.1 927269 930526 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(927269..930526) Helicobacter pylori Lithuania75 12351983 YP_005773052.1 CDS HPLT_04675 NC_017362.1 930625 931317 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(930625..931317) Helicobacter pylori Lithuania75 12351984 YP_005773053.1 CDS HPLT_04680 NC_017362.1 931462 932457 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 931462..932457 Helicobacter pylori Lithuania75 12351985 YP_005773054.1 CDS HPLT_04685 NC_017362.1 932536 939720 D hypothetical protein 932536..939720 Helicobacter pylori Lithuania75 12351986 YP_005773055.1 CDS HPLT_04690 NC_017362.1 939772 940866 D outer membrane protein (omp12) 939772..940866 Helicobacter pylori Lithuania75 12351987 YP_005773056.1 CDS HPLT_04695 NC_017362.1 940929 941135 R COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase complement(940929..941135) Helicobacter pylori Lithuania75 12351988 YP_005773057.1 CDS recR NC_017362.1 941263 941844 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 941263..941844 Helicobacter pylori Lithuania75 12351989 YP_005773058.1 CDS truD NC_017362.1 941841 942986 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 941841..942986 Helicobacter pylori Lithuania75 12351990 YP_005773059.1 CDS HPLT_04710 NC_017362.1 942973 943911 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 942973..943911 Helicobacter pylori Lithuania75 12351991 YP_005773060.1 CDS folE NC_017362.1 943912 944454 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 943912..944454 Helicobacter pylori Lithuania75 12351992 YP_005773061.1 CDS HPLT_04720 NC_017362.1 944470 945381 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 944470..945381 Helicobacter pylori Lithuania75 12351993 YP_005773062.1 CDS surE NC_017362.1 945378 946181 D COG0496 Predicted acid phosphatase; stationary phase survival protein SurE 945378..946181 Helicobacter pylori Lithuania75 12351994 YP_005773063.1 CDS HPLT_04730 NC_017362.1 946178 946837 D hypothetical protein 946178..946837 Helicobacter pylori Lithuania75 12351995 YP_005773064.1 CDS HPLT_04735 NC_017362.1 946839 947441 D COG0720 6-pyruvoyl-tetrahydropterin synthase; putative 6-pyruvoyl tetrahydrobiopterin synthase 946839..947441 Helicobacter pylori Lithuania75 12351996 YP_005773065.1 CDS HPLT_04740 NC_017362.1 947444 948199 D COG0602 Organic radical activating enzymes; hypothetical protein 947444..948199 Helicobacter pylori Lithuania75 12351997 YP_005773066.1 CDS HPLT_04745 NC_017362.1 948210 948695 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 948210..948695 Helicobacter pylori Lithuania75 12351998 YP_005773067.1 CDS HPLT_04750 NC_017362.1 948791 949039 D hypothetical protein 948791..949039 Helicobacter pylori Lithuania75 12351999 YP_005773068.1 CDS HPLT_04755 NC_017362.1 949225 950370 R COG0477 Permeases of the major facilitator superfamily; proline and betaine transporter complement(949225..950370) Helicobacter pylori Lithuania75 12352000 YP_005773069.1 CDS HPLT_04760 NC_017362.1 950714 950848 D hypothetical protein 950714..950848 Helicobacter pylori Lithuania75 12352001 YP_005773070.1 CDS HPLT_04775 NC_017362.1 952191 952538 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(952191..952538) Helicobacter pylori Lithuania75 12352002 YP_005773071.1 CDS HPLT_04780 NC_017362.1 952600 953322 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease complement(952600..953322) Helicobacter pylori Lithuania75 12352003 YP_005773072.1 CDS HPLT_04785 NC_017362.1 953297 954073 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; putative polar amino acid transport system substrate-binding protein complement(953297..954073) Helicobacter pylori Lithuania75 12352004 YP_005773073.1 CDS HPLT_04790 NC_017362.1 954144 955277 R COG0787 Alanine racemase; alanine racemase complement(954144..955277) Helicobacter pylori Lithuania75 12352005 YP_005773074.1 CDS HPLT_04795 NC_017362.1 955284 956636 R COG1115 Na+/alanine symporter; AGCS family alanine/glycine:cation symporter complement(955284..956636) Helicobacter pylori Lithuania75 12352006 YP_005773075.1 CDS HPLT_04800 NC_017362.1 956677 957909 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase complement(956677..957909) Helicobacter pylori Lithuania75 12352007 YP_005773076.1 CDS HPLT_04805 NC_017362.1 957933 958310 R COG0251 Putative translation initiation inhibitor, yjgF family; hypothetical protein complement(957933..958310) Helicobacter pylori Lithuania75 12352008 YP_005773077.1 CDS HPLT_04810 NC_017362.1 958485 958700 D hypothetical protein 958485..958700 Helicobacter pylori Lithuania75 12352009 YP_005773078.1 CDS HPLT_04815 NC_017362.1 958812 959111 D protein tRNA-associated locus protein 958812..959111 Helicobacter pylori Lithuania75 12352011 YP_005773079.1 CDS HPLT_04820 NC_017362.1 959671 961161 D COG1757 Na+/H+ antiporter; hypothetical protein 959671..961161 Helicobacter pylori Lithuania75 12352015 YP_005773080.1 CDS HPLT_04825 NC_017362.1 961476 961838 D hypothetical protein 961476..961838 Helicobacter pylori Lithuania75 12352016 YP_005773081.1 CDS HPLT_04830 NC_017362.1 962207 963220 R hypothetical protein complement(962207..963220) Helicobacter pylori Lithuania75 12352017 YP_005773082.1 CDS HPLT_04835 NC_017362.1 963230 963682 R COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase complement(963230..963682) Helicobacter pylori Lithuania75 12352018 YP_005773083.1 CDS HPLT_04840 NC_017362.1 963696 964565 R COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta complement(963696..964565) Helicobacter pylori Lithuania75 12352019 YP_005773084.1 CDS HPLT_04845 NC_017362.1 964646 965260 D COG0540 Aspartate carbamoyltransferase, catalytic chain; putative recombination protein RecO 964646..965260 Helicobacter pylori Lithuania75 12352020 YP_005773085.1 CDS HPLT_04850 NC_017362.1 965271 965927 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); putative competence/damage-inducible protein CinA 965271..965927 Helicobacter pylori Lithuania75 12352021 YP_005773086.1 CDS HPLT_04855 NC_017362.1 965930 966496 R hypothetical protein complement(965930..966496) Helicobacter pylori Lithuania75 12352022 YP_005773087.1 CDS HPLT_04860 NC_017362.1 966560 967192 R COG0778 Nitroreductase; oxygen-insensitive NADPH nitroreductase complement(966560..967192) Helicobacter pylori Lithuania75 12352023 YP_005773088.1 CDS HPLT_04865 NC_017362.1 967189 968043 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(967189..968043) Helicobacter pylori Lithuania75 12352024 YP_005773089.1 CDS HPLT_04870 NC_017362.1 968052 968780 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(968052..968780) Helicobacter pylori Lithuania75 12352025 YP_005773090.1 CDS HPLT_04875 NC_017362.1 968799 969980 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(968799..969980) Helicobacter pylori Lithuania75 12352026 YP_005773091.1 CDS HPLT_04880 NC_017362.1 969981 970760 R COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein complement(969981..970760) Helicobacter pylori Lithuania75 12352027 YP_005773092.1 CDS HPLT_04885 NC_017362.1 970770 971501 R COG0327 Uncharacterized conserved protein; hypothetical protein complement(970770..971501) Helicobacter pylori Lithuania75 12352028 YP_005773093.1 CDS glyQ NC_017362.1 971503 972399 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(971503..972399) Helicobacter pylori Lithuania75 12352029 YP_005773094.1 CDS gpsA NC_017362.1 972413 973351 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(972413..973351) Helicobacter pylori Lithuania75 12352030 YP_005773095.1 CDS HPLT_04900 NC_017362.1 973730 973951 R hypothetical protein complement(973730..973951) Helicobacter pylori Lithuania75 12352031 YP_005773096.1 CDS HPLT_04905 NC_017362.1 973929 974156 R COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase, synthetase domain; putative ATPase complement(973929..974156) Helicobacter pylori Lithuania75 12352032 YP_005773097.1 CDS HPLT_04910 NC_017362.1 974205 976325 R COG0699 Predicted GTPases (dynamin-related); hypothetical protein complement(974205..976325) Helicobacter pylori Lithuania75 12352033 YP_005773098.1 CDS HPLT_04915 NC_017362.1 976664 976816 R hypothetical protein complement(976664..976816) Helicobacter pylori Lithuania75 12352034 YP_005773099.1 CDS HPLT_04920 NC_017362.1 976846 977127 R hypothetical protein complement(976846..977127) Helicobacter pylori Lithuania75 12352035 YP_005773100.1 CDS HPLT_04925 NC_017362.1 977143 980202 R COG3696 Putative silver efflux pump; cobalt-zinc-cadmium resistance protein complement(977143..980202) Helicobacter pylori Lithuania75 12352036 YP_005773101.1 CDS HPLT_04930 NC_017362.1 980202 981281 R COG0845 Membrane-fusion protein; putative cation efflux system protein complement(980202..981281) Helicobacter pylori Lithuania75 12352037 YP_005773102.1 CDS HPLT_04935 NC_017362.1 981278 982576 R hypothetical protein complement(981278..982576) Helicobacter pylori Lithuania75 12352038 YP_005773103.1 CDS glyS NC_017362.1 982566 984671 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(982566..984671) Helicobacter pylori Lithuania75 12352046 YP_005773104.1 CDS HPLT_04945 NC_017362.1 984784 985860 D COG0466 ATP-dependent Lon protease, bacterial type; hypothetical protein 984784..985860 Helicobacter pylori Lithuania75 12352047 YP_005773105.1 CDS HPLT_04950 NC_017362.1 985873 987348 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 985873..987348 Helicobacter pylori Lithuania75 12352048 YP_005773106.1 CDS gatC NC_017362.1 987363 987644 D COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 987363..987644 Helicobacter pylori Lithuania75 12352049 YP_005773107.1 CDS HPLT_04960 NC_017362.1 987762 989072 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(987762..989072) Helicobacter pylori Lithuania75 12352050 YP_005773108.1 CDS HPLT_04965 NC_017362.1 989202 990665 D COG0760 Parvulin-like peptidyl-prolyl isomerase; putative pedidyl-prolyl cis-trans ismerase D(PPIase D) (Rotamase D) 989202..990665 Helicobacter pylori Lithuania75 12352051 YP_005773109.1 CDS HPLT_04970 NC_017362.1 990681 992162 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 990681..992162 Helicobacter pylori Lithuania75 12352052 YP_005773110.1 CDS HPLT_04975 NC_017362.1 992293 993450 D COG0206 Cell division GTPase; cell division protein FtsZ 992293..993450 Helicobacter pylori Lithuania75 12352053 YP_005773111.1 CDS HPLT_04980 NC_017362.1 993885 993986 R hypothetical protein complement(993885..993986) Helicobacter pylori Lithuania75 12352054 YP_005773112.1 CDS HPLT_04985 NC_017362.1 994018 994842 R COG0668 Small-conductance mechanosensitive channel; mechanosensitive channel MscS complement(994018..994842) Helicobacter pylori Lithuania75 12352055 YP_005773113.1 CDS HPLT_04990 NC_017362.1 994914 995186 R hypothetical protein complement(994914..995186) Helicobacter pylori Lithuania75 12352056 YP_005773114.1 CDS HPLT_05005 NC_017362.1 996466 996900 R hypothetical protein complement(996466..996900) Helicobacter pylori Lithuania75 12352057 YP_005773115.1 CDS HPLT_05010 NC_017362.1 996972 997208 R COG0465 ATP-dependent Zn proteases; hypothetical protein complement(996972..997208) Helicobacter pylori Lithuania75 12352058 YP_005773116.1 CDS HPLT_05030 NC_017362.1 999537 1000253 R hypothetical protein complement(999537..1000253) Helicobacter pylori Lithuania75 12352059 YP_005773117.1 CDS HPLT_05045 NC_017362.1 1003208 1004419 R COG0515 Serine/threonine protein kinase; putative serine/threonine kinase complement(1003208..1004419) Helicobacter pylori Lithuania75 12352060 YP_005773118.1 CDS HPLT_05050 NC_017362.1 1004478 1005095 R COG0631 Serine/threonine protein phosphatase; protein phosphatase 2 C-like protein (ptc1) complement(1004478..1005095) Helicobacter pylori Lithuania75 12352061 YP_005773119.1 CDS HPLT_05055 NC_017362.1 1005092 1005424 R hypothetical protein complement(1005092..1005424) Helicobacter pylori Lithuania75 12352062 YP_005773120.1 CDS HPLT_05060 NC_017362.1 1005421 1005519 R hypothetical protein complement(1005421..1005519) Helicobacter pylori Lithuania75 12352063 YP_005773121.1 CDS HPLT_05065 NC_017362.1 1005512 1006171 R COG4245 Uncharacterized protein encoded in toxicity protection region of plasmid R478, contains von Willebrand factor (vWF) domain; hypothetical protein complement(1005512..1006171) Helicobacter pylori Lithuania75 12352064 YP_005773122.1 CDS HPLT_05070 NC_017362.1 1006152 1006250 R hypothetical protein complement(1006152..1006250) Helicobacter pylori Lithuania75 12352065 YP_005773123.1 CDS HPLT_05080 NC_017362.1 1010929 1011063 R hypothetical protein complement(1010929..1011063) Helicobacter pylori Lithuania75 12352068 YP_005773124.1 CDS HPLT_05085 NC_017362.1 1011053 1011169 R hypothetical protein complement(1011053..1011169) Helicobacter pylori Lithuania75 12352069 YP_005773125.1 CDS HPLT_05090 NC_017362.1 1011163 1011549 D hypothetical protein 1011163..1011549 Helicobacter pylori Lithuania75 12352070 YP_005773126.1 CDS HPLT_05095 NC_017362.1 1011549 1013282 D COG1479 Uncharacterized conserved protein; hypothetical protein 1011549..1013282 Helicobacter pylori Lithuania75 12352071 YP_005773127.1 CDS HPLT_05100 NC_017362.1 1013324 1014577 D COG0608 Single-stranded DNA-specific exonuclease; hypothetical protein 1013324..1014577 Helicobacter pylori Lithuania75 12352072 YP_005773128.1 CDS HPLT_05105 NC_017362.1 1014621 1016480 D hypothetical protein 1014621..1016480 Helicobacter pylori Lithuania75 12352073 YP_005773129.1 CDS HPLT_05110 NC_017362.1 1016586 1017482 D hypothetical protein 1016586..1017482 Helicobacter pylori Lithuania75 12352074 YP_005773130.1 CDS HPLT_05115 NC_017362.1 1017594 1019441 R COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase complement(1017594..1019441) Helicobacter pylori Lithuania75 12352075 YP_005773131.1 CDS HPLT_05120 NC_017362.1 1019456 1020625 R COG0438 Glycosyltransferase; type 1 capsular polysaccharide biosynthesis protein J complement(1019456..1020625) Helicobacter pylori Lithuania75 12352076 YP_005773132.1 CDS HPLT_05125 NC_017362.1 1020630 1021058 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(1020630..1021058) Helicobacter pylori Lithuania75 12352077 YP_005773133.1 CDS HPLT_05130 NC_017362.1 1021074 1021859 R COG0500 SAM-dependent methyltransferases; hypothetical protein complement(1021074..1021859) Helicobacter pylori Lithuania75 12352078 YP_005773134.1 CDS HPLT_05135 NC_017362.1 1021863 1022882 R hypothetical protein complement(1021863..1022882) Helicobacter pylori Lithuania75 12352079 YP_005773135.1 CDS HPLT_05140 NC_017362.1 1022883 1024835 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1022883..1024835) Helicobacter pylori Lithuania75 12352080 YP_005773136.1 CDS HPLT_05145 NC_017362.1 1025004 1026173 D COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acid synthase 1025004..1026173 Helicobacter pylori Lithuania75 12352081 YP_005773137.1 CDS HPLT_05150 NC_017362.1 1026176 1028047 R COG0668 Small-conductance mechanosensitive channel; mechanosensitive ion channel family protein complement(1026176..1028047) Helicobacter pylori Lithuania75 12352082 YP_005773138.1 CDS HPLT_05155 NC_017362.1 1029094 1029213 R hypothetical protein complement(1029094..1029213) Helicobacter pylori Lithuania75 12352087 YP_005773139.1 CDS HPLT_05160 NC_017362.1 1029288 1030037 R putative neuraminyllactose-binding hemagglutinin-like protein complement(1029288..1030037) Helicobacter pylori Lithuania75 12352088 YP_005773140.1 CDS HPLT_05165 NC_017362.1 1030024 1030125 R hypothetical protein complement(1030024..1030125) Helicobacter pylori Lithuania75 12352089 YP_005773141.1 CDS guaA NC_017362.1 1030122 1031648 R COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase complement(1030122..1031648) Helicobacter pylori Lithuania75 12352090 YP_005773142.1 CDS HPLT_05175 NC_017362.1 1031659 1032147 R hypothetical protein complement(1031659..1032147) Helicobacter pylori Lithuania75 12352091 YP_005773143.1 CDS HPLT_05180 NC_017362.1 1032308 1034698 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; biotin sulfoxide reductase complement(1032308..1034698) Helicobacter pylori Lithuania75 12352092 YP_005773144.1 CDS HPLT_05185 NC_017362.1 1034803 1035393 R hypothetical protein complement(1034803..1035393) Helicobacter pylori Lithuania75 12352093 YP_005773145.1 CDS HPLT_05190 NC_017362.1 1035419 1036741 R COG0520 Selenocysteine lyase; nifs-like protein complement(1035419..1036741) Helicobacter pylori Lithuania75 12352094 YP_005773146.1 CDS HPLT_05195 NC_017362.1 1036760 1037074 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; ADP hydrolase complement(1036760..1037074) Helicobacter pylori Lithuania75 12352095 YP_005773147.1 CDS pheS NC_017362.1 1037155 1038141 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1037155..1038141 Helicobacter pylori Lithuania75 12352096 YP_005773148.1 CDS pheT NC_017362.1 1038141 1040435 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1038141..1040435 Helicobacter pylori Lithuania75 12352097 YP_005773149.1 CDS HPLT_05210 NC_017362.1 1040451 1041740 D COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1040451..1041740 Helicobacter pylori Lithuania75 12352098 YP_005773150.1 CDS ispH NC_017362.1 1041730 1042554 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1041730..1042554 Helicobacter pylori Lithuania75 12352099 YP_005773151.1 CDS rpsA NC_017362.1 1042675 1044345 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1042675..1044345 Helicobacter pylori Lithuania75 12352100 YP_005773152.1 CDS HPLT_05225 NC_017362.1 1044374 1044922 D hypothetical protein 1044374..1044922 Helicobacter pylori Lithuania75 12352101 YP_005773153.1 CDS HPLT_05230 NC_017362.1 1044938 1046512 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1044938..1046512 Helicobacter pylori Lithuania75 12352102 YP_005773154.1 CDS HPLT_05235 NC_017362.1 1046522 1048372 D COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1046522..1048372 Helicobacter pylori Lithuania75 12352103 YP_005773155.1 CDS HPLT_05240 NC_017362.1 1048395 1049063 D COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein 1048395..1049063 Helicobacter pylori Lithuania75 12352104 YP_005773156.1 CDS HPLT_05245 NC_017362.1 1049065 1049823 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 1049065..1049823 Helicobacter pylori Lithuania75 12352105 YP_005773157.1 CDS HPLT_05250 NC_017362.1 1049827 1050762 D COG0835 Chemotaxis signal transduction protein; CheA-MCP interaction modulator 1049827..1050762 Helicobacter pylori Lithuania75 12352106 YP_005773158.1 CDS HPLT_05255 NC_017362.1 1050819 1053233 D COG0643 Chemotaxis protein histidine kinase and related kinases; auto phosphorylating histidine kinase 1050819..1053233 Helicobacter pylori Lithuania75 12352107 YP_005773159.1 CDS HPLT_05260 NC_017362.1 1053230 1053727 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein (cheW) 1053230..1053727 Helicobacter pylori Lithuania75 12352108 YP_005773160.1 CDS HPLT_05265 NC_017362.1 1053981 1054481 R COG2077 Peroxiredoxin; thiol peroxidase complement(1053981..1054481) Helicobacter pylori Lithuania75 12352109 YP_005773161.1 CDS HPLT_05270 NC_017362.1 1054704 1055345 D COG0605 Superoxide dismutase; superoxide dismutase 1054704..1055345 Helicobacter pylori Lithuania75 12352110 YP_005773162.1 CDS HPLT_05275 NC_017362.1 1055399 1056130 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1055399..1056130 Helicobacter pylori Lithuania75 12352111 YP_005773163.1 CDS HPLT_05280 NC_017362.1 1056164 1058023 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(1056164..1058023) Helicobacter pylori Lithuania75 12352112 YP_005773164.1 CDS HPLT_05285 NC_017362.1 1058008 1058244 R hypothetical protein complement(1058008..1058244) Helicobacter pylori Lithuania75 12352113 YP_005773165.1 CDS HPLT_05290 NC_017362.1 1058257 1058484 R COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein complement(1058257..1058484) Helicobacter pylori Lithuania75 12352114 YP_005773166.1 CDS HPLT_05295 NC_017362.1 1058666 1059412 D hypothetical protein 1058666..1059412 Helicobacter pylori Lithuania75 12352115 YP_005773167.1 CDS HPLT_05300 NC_017362.1 1059420 1059950 R hypothetical protein complement(1059420..1059950) Helicobacter pylori Lithuania75 12352116 YP_005773168.1 CDS HPLT_05305 NC_017362.1 1060123 1061346 D COG0501 Zn-dependent protease with chaperone function; putative metalloprotease; putative membrane protein 1060123..1061346 Helicobacter pylori Lithuania75 12352117 YP_005773169.1 CDS HPLT_05310 NC_017362.1 1061343 1062173 D COG2890 Methylase of polypeptide chain release factors; S-adenosylmethionine-dependent methyltransferase 1061343..1062173 Helicobacter pylori Lithuania75 12352118 YP_005773170.1 CDS HPLT_05315 NC_017362.1 1062240 1063586 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 1062240..1063586 Helicobacter pylori Lithuania75 12352119 YP_005773171.1 CDS HPLT_05320 NC_017362.1 1063600 1064997 R Alpha1,3-fucosyltransferase complement(1063600..1064997) Helicobacter pylori Lithuania75 12352120 YP_005773172.1 CDS HPLT_05325 NC_017362.1 1065007 1067817 R COG1333 ResB protein required for cytochrome c biosynthesis; bifunctional cytochrome c biogenesis protein complement(1065007..1067817) Helicobacter pylori Lithuania75 12352121 YP_005773173.1 CDS HPLT_05330 NC_017362.1 1067827 1068498 R COG2143 Thioredoxin-related protein; thiol:disulfide interchange protein complement(1067827..1068498) Helicobacter pylori Lithuania75 12352122 YP_005773174.1 CDS hemH NC_017362.1 1068571 1069578 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(1068571..1069578) Helicobacter pylori Lithuania75 12352123 YP_005773175.1 CDS HPLT_05340 NC_017362.1 1069634 1070065 D hypothetical protein 1069634..1070065 Helicobacter pylori Lithuania75 12352124 YP_005773176.1 CDS HPLT_05345 NC_017362.1 1070066 1070746 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1070066..1070746 Helicobacter pylori Lithuania75 12352125 YP_005773177.1 CDS HPLT_05350 NC_017362.1 1070840 1072948 R outer membrane protein HomC complement(1070840..1072948) Helicobacter pylori Lithuania75 12352126 YP_005773178.1 CDS dcd NC_017362.1 1073109 1073675 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(1073109..1073675) Helicobacter pylori Lithuania75 12352127 YP_005773179.1 CDS HPLT_05360 NC_017362.1 1073800 1074270 D COG0511 Biotin carboxyl carrier protein; biotin carboxyl carrier protein 1073800..1074270 Helicobacter pylori Lithuania75 12352128 YP_005773180.1 CDS HPLT_05365 NC_017362.1 1074276 1075643 D COG0439 Biotin carboxylase; biotin carboxylase 1074276..1075643 Helicobacter pylori Lithuania75 12352129 YP_005773181.1 CDS HPLT_05370 NC_017362.1 1075737 1076696 D putative adenine methyltransferase 1075737..1076696 Helicobacter pylori Lithuania75 12352130 YP_005773182.1 CDS HPLT_05375 NC_017362.1 1076696 1077244 D hypothetical protein 1076696..1077244 Helicobacter pylori Lithuania75 12352131 YP_005773183.1 CDS HPLT_05380 NC_017362.1 1077338 1077931 D hypothetical protein 1077338..1077931 Helicobacter pylori Lithuania75 12352132 YP_005773184.1 CDS HPLT_05385 NC_017362.1 1077928 1079064 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1077928..1079064 Helicobacter pylori Lithuania75 12352133 YP_005773185.1 CDS nrdF NC_017362.1 1079373 1080398 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 1079373..1080398 Helicobacter pylori Lithuania75 12352135 YP_005773186.1 CDS pcm NC_017362.1 1080408 1081037 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1080408..1081037 Helicobacter pylori Lithuania75 12352136 YP_005773187.1 CDS HPLT_05405 NC_017362.1 1081048 1082085 D COG0795 Predicted permeases; hypothetical protein 1081048..1082085 Helicobacter pylori Lithuania75 12352137 YP_005773188.1 CDS truA NC_017362.1 1082086 1082814 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1082086..1082814 Helicobacter pylori Lithuania75 12352138 YP_005773189.1 CDS HPLT_05415 NC_017362.1 1082808 1083842 R COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1082808..1083842) Helicobacter pylori Lithuania75 12352139 YP_005773190.1 CDS HPLT_05425 NC_017362.1 1084558 1086093 D putative outer membrane protein 1084558..1086093 Helicobacter pylori Lithuania75 12352142 YP_005773191.1 CDS HPLT_05430 NC_017362.1 1086115 1086867 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short chain alcohol dehydrogenase 1086115..1086867 Helicobacter pylori Lithuania75 12352143 YP_005773192.1 CDS HPLT_05435 NC_017362.1 1087067 1087939 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1087067..1087939) Helicobacter pylori Lithuania75 12352144 YP_005773193.1 CDS HPLT_05440 NC_017362.1 1088025 1088651 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase complement(1088025..1088651) Helicobacter pylori Lithuania75 12352145 YP_005773194.1 CDS HPLT_05445 NC_017362.1 1088670 1090496 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase complement(1088670..1090496) Helicobacter pylori Lithuania75 12352146 YP_005773195.1 CDS HPLT_05450 NC_017362.1 1090562 1091839 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1090562..1091839 Helicobacter pylori Lithuania75 12352147 YP_005773196.1 CDS HPLT_05455 NC_017362.1 1091849 1092532 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1091849..1092532 Helicobacter pylori Lithuania75 12352148 YP_005773197.1 CDS glk NC_017362.1 1092519 1093529 D COG0837 Glucokinase; glucokinase 1092519..1093529 Helicobacter pylori Lithuania75 12352149 YP_005773198.1 CDS HPLT_05465 NC_017362.1 1093690 1094736 D COG1064 Zn-dependent alcohol dehydrogenases; NADP-dependent alcohol dehydrogenase 1093690..1094736 Helicobacter pylori Lithuania75 12352150 YP_005773199.1 CDS HPLT_05470 NC_017362.1 1094916 1095056 D hypothetical protein 1094916..1095056 Helicobacter pylori Lithuania75 12352151 YP_005773200.1 CDS HPLT_05475 NC_017362.1 1095084 1096043 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; LPS biosynthesis protein complement(1095084..1096043) Helicobacter pylori Lithuania75 12352152 YP_005773201.1 CDS HPLT_05480 NC_017362.1 1096115 1096219 D hypothetical protein 1096115..1096219 Helicobacter pylori Lithuania75 12352153 YP_005773202.1 CDS HPLT_05485 NC_017362.1 1096228 1097535 D hypothetical protein 1096228..1097535 Helicobacter pylori Lithuania75 12352154 YP_005773203.1 CDS HPLT_05490 NC_017362.1 1097542 1098204 R outer membrane protein (omp23) complement(1097542..1098204) Helicobacter pylori Lithuania75 12352155 YP_005773204.1 CDS HPLT_05495 NC_017362.1 1098496 1099056 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate flavodoxin oxidoreductase subunit gamma 1098496..1099056 Helicobacter pylori Lithuania75 12352156 YP_005773205.1 CDS porD NC_017362.1 1099072 1099464 D COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; pyruvate flavodoxin oxidoreductase subunit delta 1099072..1099464 Helicobacter pylori Lithuania75 12352157 YP_005773206.1 CDS porA NC_017362.1 1099474 1100697 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin oxidoreductase subunit alpha 1099474..1100697 Helicobacter pylori Lithuania75 12352158 YP_005773207.1 CDS HPLT_05510 NC_017362.1 1100710 1101654 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; pyruvate ferredoxin oxidoreductase subunit beta 1100710..1101654 Helicobacter pylori Lithuania75 12352159 YP_005773208.1 CDS HPLT_05515 NC_017362.1 1101764 1103086 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1101764..1103086 Helicobacter pylori Lithuania75 12352160 YP_005773209.1 CDS HPLT_05520 NC_017362.1 1103151 1103984 D putative outer membrane protein; putative signal peptide 1103151..1103984 Helicobacter pylori Lithuania75 12352161 YP_005773210.1 CDS HPLT_05525 NC_017362.1 1103995 1105971 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(1103995..1105971) Helicobacter pylori Lithuania75 12352162 YP_005773211.1 CDS HPLT_05530 NC_017362.1 1106040 1106660 R hypothetical protein complement(1106040..1106660) Helicobacter pylori Lithuania75 12352163 YP_005773212.1 CDS HPLT_05535 NC_017362.1 1106748 1107086 R hypothetical protein complement(1106748..1107086) Helicobacter pylori Lithuania75 12352164 YP_005773213.1 CDS HPLT_05540 NC_017362.1 1107090 1109618 R hypothetical protein complement(1107090..1109618) Helicobacter pylori Lithuania75 12352165 YP_005773214.1 CDS HPLT_05545 NC_017362.1 1109629 1109865 D hypothetical protein 1109629..1109865 Helicobacter pylori Lithuania75 12352166 YP_005773215.1 CDS HPLT_05550 NC_017362.1 1109887 1110087 D hypothetical protein 1109887..1110087 Helicobacter pylori Lithuania75 12352167 YP_005773216.1 CDS HPLT_05555 NC_017362.1 1110342 1111112 R COG0790 FOG: TPR repeat, SEL1 subfamily; cysteine-rich protein X complement(1110342..1111112) Helicobacter pylori Lithuania75 12352168 YP_005773217.1 CDS HPLT_05560 NC_017362.1 1111181 1111354 D hypothetical protein 1111181..1111354 Helicobacter pylori Lithuania75 12352169 YP_005773218.1 CDS HPLT_05565 NC_017362.1 1111357 1113060 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(1111357..1113060) Helicobacter pylori Lithuania75 12352170 YP_005773219.1 CDS flgK NC_017362.1 1113247 1115067 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(1113247..1115067) Helicobacter pylori Lithuania75 12352171 YP_005773220.1 CDS HPLT_05575 NC_017362.1 1115069 1115503 R hypothetical protein complement(1115069..1115503) Helicobacter pylori Lithuania75 12352172 YP_005773221.1 CDS HPLT_05580 NC_017362.1 1115634 1116590 R COG0270 Site-specific DNA methylase; type II DNA modification enzyme complement(1115634..1116590) Helicobacter pylori Lithuania75 12352173 YP_005773222.1 CDS HPLT_05585 NC_017362.1 1116731 1116934 R hypothetical protein complement(1116731..1116934) Helicobacter pylori Lithuania75 12352174 YP_005773223.1 CDS HPLT_05590 NC_017362.1 1116998 1117204 R hypothetical protein complement(1116998..1117204) Helicobacter pylori Lithuania75 12352175 YP_005773224.1 CDS HPLT_05595 NC_017362.1 1117236 1117793 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase slyD complement(1117236..1117793) Helicobacter pylori Lithuania75 12352176 YP_005773225.1 CDS HPLT_05600 NC_017362.1 1117780 1118775 R hypothetical protein complement(1117780..1118775) Helicobacter pylori Lithuania75 12352177 YP_005773226.1 CDS HPLT_05605 NC_017362.1 1118783 1119322 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(1118783..1119322) Helicobacter pylori Lithuania75 12352178 YP_005773227.1 CDS tolB NC_017362.1 1119389 1120642 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(1119389..1120642) Helicobacter pylori Lithuania75 12352179 YP_005773228.1 CDS HPLT_05615 NC_017362.1 1120639 1121463 R hypothetical protein complement(1120639..1121463) Helicobacter pylori Lithuania75 12352180 YP_005773229.1 CDS HPLT_05620 NC_017362.1 1121482 1121883 R COG0848 Biopolymer transport protein; biopolymer transport protein ExbD/TolR complement(1121482..1121883) Helicobacter pylori Lithuania75 12352181 YP_005773230.1 CDS HPLT_05625 NC_017362.1 1121935 1122504 R COG0811 Biopolymer transport proteins; biopolymer transport protein complement(1121935..1122504) Helicobacter pylori Lithuania75 12352182 YP_005773231.1 CDS atpC NC_017362.1 1122515 1122886 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(1122515..1122886) Helicobacter pylori Lithuania75 12352183 YP_005773232.1 CDS HPLT_05635 NC_017362.1 1122896 1124305 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(1122896..1124305) Helicobacter pylori Lithuania75 12352184 YP_005773233.1 CDS HPLT_05640 NC_017362.1 1124329 1125234 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(1124329..1125234) Helicobacter pylori Lithuania75 12352185 YP_005773234.1 CDS HPLT_05645 NC_017362.1 1125249 1126760 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(1125249..1126760) Helicobacter pylori Lithuania75 12352186 YP_005773235.1 CDS HPLT_05650 NC_017362.1 1126783 1127325 R F0F1 ATP synthase subunit delta complement(1126783..1127325) Helicobacter pylori Lithuania75 12352187 YP_005773236.1 CDS HPLT_05655 NC_017362.1 1127326 1127841 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(1127326..1127841) Helicobacter pylori Lithuania75 12352188 YP_005773237.1 CDS HPLT_05660 NC_017362.1 1127845 1128279 R F0F1 ATP synthase subunit B' complement(1127845..1128279) Helicobacter pylori Lithuania75 12352189 YP_005773238.1 CDS HPLT_05665 NC_017362.1 1128391 1129263 R COG1475 Predicted transcriptional regulators; putative plasmid replication-partition related protein complement(1128391..1129263) Helicobacter pylori Lithuania75 12352190 YP_005773239.1 CDS HPLT_05670 NC_017362.1 1129266 1130060 R COG1192 ATPases involved in chromosome partitioning; chromosome partitioning protein complement(1129266..1130060) Helicobacter pylori Lithuania75 12352191 YP_005773240.1 CDS HPLT_05675 NC_017362.1 1130063 1130701 R COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase complement(1130063..1130701) Helicobacter pylori Lithuania75 12352192 YP_005773241.1 CDS fmt NC_017362.1 1130698 1131609 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1130698..1131609) Helicobacter pylori Lithuania75 12352193 YP_005773242.1 CDS HPLT_05685 NC_017362.1 1131621 1134200 R COG1132 ABC-type multidrug transport system, ATPase and permease components; ATPase complement(1131621..1134200) Helicobacter pylori Lithuania75 12352194 YP_005773243.1 CDS HPLT_05690 NC_017362.1 1134239 1135540 R COG4487 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1134239..1135540) Helicobacter pylori Lithuania75 12352195 YP_005773244.1 CDS HPLT_05695 NC_017362.1 1136065 1136385 R hypothetical protein complement(1136065..1136385) Helicobacter pylori Lithuania75 12352196 YP_005773245.1 CDS HPLT_05700 NC_017362.1 1138483 1138635 R hypothetical protein complement(1138483..1138635) Helicobacter pylori Lithuania75 12352198 YP_005773246.1 CDS HPLT_05705 NC_017362.1 1138714 1139481 R COG1432 Uncharacterized conserved protein; hypothetical protein complement(1138714..1139481) Helicobacter pylori Lithuania75 12352199 YP_005773247.1 CDS rplS NC_017362.1 1139915 1140271 R COG0335 Ribosomal protein L19; 50S ribosomal protein L19 complement(1139915..1140271) Helicobacter pylori Lithuania75 12352200 YP_005773248.1 CDS trmD NC_017362.1 1140293 1140982 R COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(1140293..1140982) Helicobacter pylori Lithuania75 12352201 YP_005773249.1 CDS rimM NC_017362.1 1140983 1141552 R COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM complement(1140983..1141552) Helicobacter pylori Lithuania75 12352202 YP_005773250.1 CDS HPLT_05725 NC_017362.1 1141553 1141900 R COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein complement(1141553..1141900) Helicobacter pylori Lithuania75 12352203 YP_005773251.1 CDS rpsP NC_017362.1 1141917 1142147 R COG0228 Ribosomal protein S16; 30S ribosomal protein S16 complement(1141917..1142147) Helicobacter pylori Lithuania75 12352204 YP_005773252.1 CDS HPLT_05735 NC_017362.1 1142221 1143567 R COG0541 Signal recognition particle GTPase; signal recognition particle protein complement(1142221..1143567) Helicobacter pylori Lithuania75 12352205 YP_005773253.1 CDS valS NC_017362.1 1143582 1146200 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(1143582..1146200) Helicobacter pylori Lithuania75 12352206 YP_005773254.1 CDS HPLT_05745 NC_017362.1 1146338 1146745 D COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1146338..1146745 Helicobacter pylori Lithuania75 12352207 YP_005773255.1 CDS murG NC_017362.1 1146941 1147819 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1146941..1147819 Helicobacter pylori Lithuania75 12352208 YP_005773256.1 CDS HPLT_05755 NC_017362.1 1147927 1150014 D hypothetical protein 1147927..1150014 Helicobacter pylori Lithuania75 12352209 YP_005773257.1 CDS HPLT_05760 NC_017362.1 1150037 1153714 D outer membrane protein HopL 1150037..1153714 Helicobacter pylori Lithuania75 12352210 YP_005773258.1 CDS HPLT_05765 NC_017362.1 1153727 1154500 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1153727..1154500 Helicobacter pylori Lithuania75 12352211 YP_005773259.1 CDS HPLT_05770 NC_017362.1 1154528 1155061 D COG2184 Protein involved in cell division; cell filamentation protein 1154528..1155061 Helicobacter pylori Lithuania75 12352212 YP_005773260.1 CDS HPLT_05775 NC_017362.1 1155076 1155840 R hypothetical protein complement(1155076..1155840) Helicobacter pylori Lithuania75 12352213 YP_005773261.1 CDS HPLT_05780 NC_017362.1 1155846 1156109 R hypothetical protein complement(1155846..1156109) Helicobacter pylori Lithuania75 12352214 YP_005773262.1 CDS HPLT_05785 NC_017362.1 1156205 1156633 R COG0319 Predicted metal-dependent hydrolase; putative metalloprotease complement(1156205..1156633) Helicobacter pylori Lithuania75 12352215 YP_005773263.1 CDS HPLT_05790 NC_017362.1 1156688 1157182 R COG0716 Flavodoxins; flavodoxin FldA complement(1156688..1157182) Helicobacter pylori Lithuania75 12352216 YP_005773264.1 CDS HPLT_05795 NC_017362.1 1157274 1157855 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(1157274..1157855) Helicobacter pylori Lithuania75 12352217 YP_005773265.1 CDS HPLT_05800 NC_017362.1 1157979 1158170 D COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cation transport subunit for cbb3-type oxidase 1157979..1158170 Helicobacter pylori Lithuania75 12352218 YP_005773266.1 CDS HPLT_05805 NC_017362.1 1158196 1159170 D COG0492 Thioredoxin reductase; thioredoxin reductase 1158196..1159170 Helicobacter pylori Lithuania75 12352219 YP_005773267.1 CDS HPLT_05810 NC_017362.1 1159177 1160337 R COG0477 Permeases of the major facilitator superfamily; putative permease, MFS superfamily; putative membrane protein complement(1159177..1160337) Helicobacter pylori Lithuania75 12352220 YP_005773268.1 CDS pgi NC_017362.1 1160401 1160526 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1160401..1160526 Helicobacter pylori Lithuania75 12352221 YP_005773269.1 CDS pgi NC_017362.1 1160516 1162039 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1160516..1162039 Helicobacter pylori Lithuania75 12352222 YP_005773270.1 CDS HPLT_05825 NC_017362.1 1162346 1163761 D Outer membrane protein HofH; putative signal peptide 1162346..1163761 Helicobacter pylori Lithuania75 12352223 YP_005773271.1 CDS HPLT_05830 NC_017362.1 1163753 1163908 R hypothetical protein complement(1163753..1163908) Helicobacter pylori Lithuania75 12352224 YP_005773272.1 CDS HPLT_05835 NC_017362.1 1164087 1166150 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein complement(1164087..1166150) Helicobacter pylori Lithuania75 12352225 YP_005773273.1 CDS HPLT_05840 NC_017362.1 1166361 1167014 D COG0765 ABC-type amino acid transport system, permease component; ABC-type transport system, permease; putative amino-acid transporter GlnP1 1166361..1167014 Helicobacter pylori Lithuania75 12352226 YP_005773274.1 CDS HPLT_05845 NC_017362.1 1167016 1167687 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein (glnP) 1167016..1167687 Helicobacter pylori Lithuania75 12352227 YP_005773275.1 CDS HPLT_05850 NC_017362.1 1167689 1168435 D COG1126 ABC-type polar amino acid transport system, ATPase component; glutamine ABC transporter ATP-binding protein 1167689..1168435 Helicobacter pylori Lithuania75 12352228 YP_005773276.1 CDS HPLT_05855 NC_017362.1 1168485 1169318 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; glutamine ABC transporter, periplasmic glutamine-binding protein 1168485..1169318 Helicobacter pylori Lithuania75 12352229 YP_005773277.1 CDS HPLT_05860 NC_017362.1 1169436 1169987 D hypothetical protein 1169436..1169987 Helicobacter pylori Lithuania75 12352230 YP_005773278.1 CDS HPLT_05865 NC_017362.1 1170201 1171424 R COG0738 Fucose permease; glucose/galactose transporter complement(1170201..1171424) Helicobacter pylori Lithuania75 12352231 YP_005773279.1 CDS HPLT_05870 NC_017362.1 1171553 1172860 R COG2252 Permeases; hypothetical protein complement(1171553..1172860) Helicobacter pylori Lithuania75 12352232 YP_005773280.1 CDS HPLT_05875 NC_017362.1 1173323 1175248 R outer membrane protein (omp27) complement(1173323..1175248) Helicobacter pylori Lithuania75 12352233 YP_005773281.1 CDS HPLT_05880 NC_017362.1 1175493 1175585 D hypothetical protein 1175493..1175585 Helicobacter pylori Lithuania75 12352234 YP_005773282.1 CDS HPLT_05885 NC_017362.1 1175708 1176409 R COG0813 Purine-nucleoside phosphorylase; purine-nucleoside phosphorylase complement(1175708..1176409) Helicobacter pylori Lithuania75 12352235 YP_005773283.1 CDS HPLT_05890 NC_017362.1 1176406 1177647 R COG1015 Phosphopentomutase; phosphopentomutase complement(1176406..1177647) Helicobacter pylori Lithuania75 12352236 YP_005773284.1 CDS HPLT_05895 NC_017362.1 1177659 1178915 R COG1972 Nucleoside permease; pyrimidine nucleoside transport protein complement(1177659..1178915) Helicobacter pylori Lithuania75 12352237 YP_005773285.1 CDS HPLT_05900 NC_017362.1 1179233 1180564 D COG0477 Permeases of the major facilitator superfamily; putative multidrug-efflux transporter; putative membrane protein 1179233..1180564 Helicobacter pylori Lithuania75 12352239 YP_005773286.1 CDS HPLT_05905 NC_017362.1 1180583 1181344 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 1180583..1181344 Helicobacter pylori Lithuania75 12352240 YP_005773287.1 CDS HPLT_05910 NC_017362.1 1181353 1182504 R COG0475 Kef-type K+ transport systems, membrane components; Na+/H+ antiporter complement(1181353..1182504) Helicobacter pylori Lithuania75 12352241 YP_005773288.1 CDS HPLT_05915 NC_017362.1 1182530 1183909 R COG0534 Na+-driven multidrug efflux pump; hypothetical protein complement(1182530..1183909) Helicobacter pylori Lithuania75 12352242 YP_005773289.1 CDS HPLT_05920 NC_017362.1 1183883 1184020 D hypothetical protein 1183883..1184020 Helicobacter pylori Lithuania75 12352243 YP_005773290.1 CDS HPLT_05925 NC_017362.1 1184079 1185254 R COG2814 Arabinose efflux permease; sugar efflux transporter complement(1184079..1185254) Helicobacter pylori Lithuania75 12352244 YP_005773291.1 CDS HPLT_05930 NC_017362.1 1185526 1186269 D COG3338 Carbonic anhydrase; Alpha-carbonic anhydrase; putative signal peptide 1185526..1186269 Helicobacter pylori Lithuania75 12352245 YP_005773292.1 CDS HPLT_05935 NC_017362.1 1186500 1187636 R COG3845 ABC-type uncharacterized transport systems, ATPase components; hypothetical protein complement(1186500..1187636) Helicobacter pylori Lithuania75 12352246 YP_005773293.1 CDS HPLT_05940 NC_017362.1 1188093 1189133 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(1188093..1189133) Helicobacter pylori Lithuania75 12352247 YP_005773294.1 CDS hisS NC_017362.1 1189120 1190448 R COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(1189120..1190448) Helicobacter pylori Lithuania75 12352248 YP_005773295.1 CDS HPLT_05950 NC_017362.1 1190510 1191559 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase II 1190510..1191559 Helicobacter pylori Lithuania75 12352249 YP_005773296.1 CDS HPLT_05955 NC_017362.1 1191708 1191842 R hypothetical protein complement(1191708..1191842) Helicobacter pylori Lithuania75 12352250 YP_005773297.1 CDS HPLT_05960 NC_017362.1 1191859 1191954 R hypothetical protein complement(1191859..1191954) Helicobacter pylori Lithuania75 12352251 YP_005773298.1 CDS HPLT_05965 NC_017362.1 1192553 1194631 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(1192553..1194631) Helicobacter pylori Lithuania75 12352252 YP_005773299.1 CDS HPLT_05970 NC_017362.1 1194643 1195110 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(1194643..1195110) Helicobacter pylori Lithuania75 12352253 YP_005773300.1 CDS rpsL NC_017362.1 1195126 1195533 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(1195126..1195533) Helicobacter pylori Lithuania75 12352254 YP_005773301.1 CDS HPLT_05980 NC_017362.1 1195621 1204293 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; DNA-directed RNA polymerase subunit beta/beta' complement(1195621..1204293) Helicobacter pylori Lithuania75 12352255 YP_005773302.1 CDS HPLT_05985 NC_017362.1 1204287 1204418 D hypothetical protein 1204287..1204418 Helicobacter pylori Lithuania75 12352256 YP_005773303.1 CDS rplL NC_017362.1 1204516 1204893 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(1204516..1204893) Helicobacter pylori Lithuania75 12352257 YP_005773304.1 CDS rplJ NC_017362.1 1204939 1205433 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(1204939..1205433) Helicobacter pylori Lithuania75 12352258 YP_005773305.1 CDS rplA NC_017362.1 1205544 1206248 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(1205544..1206248) Helicobacter pylori Lithuania75 12352259 YP_005773306.1 CDS rplK NC_017362.1 1206293 1206718 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(1206293..1206718) Helicobacter pylori Lithuania75 12352260 YP_005773307.1 CDS nusG NC_017362.1 1206736 1207263 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(1206736..1207263) Helicobacter pylori Lithuania75 12352261 YP_005773308.1 CDS secE NC_017362.1 1207293 1207472 R COG0690 Preprotein translocase subunit SecE; preprotein translocase subunit SecE complement(1207293..1207472) Helicobacter pylori Lithuania75 12352262 YP_005773309.1 CDS rpmG NC_017362.1 1207730 1207888 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(1207730..1207888) Helicobacter pylori Lithuania75 12352264 YP_005773310.1 CDS HPLT_06025 NC_017362.1 1207922 1209121 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(1207922..1209121) Helicobacter pylori Lithuania75 12352265 YP_005773311.1 CDS HPLT_06030 NC_017362.1 1209819 1211555 D COG1132 ABC-type multidrug transport system, ATPase and permease components; multidrug resistance protein (hetA) 1209819..1211555 Helicobacter pylori Lithuania75 12352270 YP_005773312.1 CDS HPLT_06035 NC_017362.1 1211564 1212232 R COG0546 Predicted phosphatases; hypothetical protein complement(1211564..1212232) Helicobacter pylori Lithuania75 12352271 YP_005773313.1 CDS HPLT_06040 NC_017362.1 1212335 1213324 R COG3392 Adenine-specific DNA methylase; adenine-specific methyltransferase complement(1212335..1213324) Helicobacter pylori Lithuania75 12352272 YP_005773314.1 CDS HPLT_06045 NC_017362.1 1213650 1213829 R hypothetical protein complement(1213650..1213829) Helicobacter pylori Lithuania75 12352273 YP_005773315.1 CDS HPLT_06050 NC_017362.1 1214152 1214667 R COG1045 Serine acetyltransferase; serine acetyltransferase complement(1214152..1214667) Helicobacter pylori Lithuania75 12352274 YP_005773316.1 CDS HPLT_06055 NC_017362.1 1215262 1215579 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(1215262..1215579) Helicobacter pylori Lithuania75 12352280 YP_005773317.1 CDS HPLT_06060 NC_017362.1 1215712 1217778 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(1215712..1217778) Helicobacter pylori Lithuania75 12352282 YP_005773318.1 CDS HPLT_06065 NC_017362.1 1217781 1218485 R COG1926 Predicted phosphoribosyltransferases; hypothetical protein complement(1217781..1218485) Helicobacter pylori Lithuania75 12352283 YP_005773319.1 CDS HPLT_06070 NC_017362.1 1218500 1220761 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(1218500..1220761) Helicobacter pylori Lithuania75 12352284 YP_005773320.1 CDS HPLT_06075 NC_017362.1 1220764 1221243 R hypothetical protein complement(1220764..1221243) Helicobacter pylori Lithuania75 12352285 YP_005773321.1 CDS HPLT_06080 NC_017362.1 1221293 1222567 R COG0151 Phosphoribosylamine-glycine ligase; phosphoribosylamine--glycine ligase complement(1221293..1222567) Helicobacter pylori Lithuania75 12352286 YP_005773322.1 CDS HPLT_06085 NC_017362.1 1222968 1223291 R hypothetical protein complement(1222968..1223291) Helicobacter pylori Lithuania75 12352287 YP_005773323.1 CDS HPLT_06090 NC_017362.1 1223293 1223763 R hypothetical protein complement(1223293..1223763) Helicobacter pylori Lithuania75 12352289 YP_005773324.1 CDS HPLT_06095 NC_017362.1 1223852 1223968 R hypothetical protein complement(1223852..1223968) Helicobacter pylori Lithuania75 12352291 YP_005773325.1 CDS HPLT_06100 NC_017362.1 1224017 1224172 D hypothetical protein 1224017..1224172 Helicobacter pylori Lithuania75 12352292 YP_005773326.1 CDS HPLT_06105 NC_017362.1 1224207 1224893 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1224207..1224893) Helicobacter pylori Lithuania75 12352293 YP_005773327.1 CDS HPLT_06110 NC_017362.1 1224887 1225591 R COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase complement(1224887..1225591) Helicobacter pylori Lithuania75 12352294 YP_005773328.1 CDS HPLT_06115 NC_017362.1 1225632 1228472 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(1225632..1228472) Helicobacter pylori Lithuania75 12352295 YP_005773329.1 CDS HPLT_06120 NC_017362.1 1228544 1228882 D COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 1228544..1228882 Helicobacter pylori Lithuania75 12352296 YP_005773330.1 CDS hemD NC_017362.1 1228885 1229565 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 1228885..1229565 Helicobacter pylori Lithuania75 12352297 YP_005773331.1 CDS HPLT_06130 NC_017362.1 1229612 1230004 D COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 1229612..1230004 Helicobacter pylori Lithuania75 12352298 YP_005773332.1 CDS HPLT_06135 NC_017362.1 1230050 1231087 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(1230050..1231087) Helicobacter pylori Lithuania75 12352299 YP_005773333.1 CDS HPLT_06140 NC_017362.1 1231183 1231473 D COG2863 Cytochrome c553; cytochrome c-553 1231183..1231473 Helicobacter pylori Lithuania75 12352300 YP_005773334.1 CDS HPLT_06145 NC_017362.1 1231634 1232101 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; dinucleoside polyphosphate hydrolase 1231634..1232101 Helicobacter pylori Lithuania75 12352301 YP_005773335.1 CDS HPLT_06150 NC_017362.1 1232103 1233320 D COG0527 Aspartokinases; aspartate kinase 1232103..1233320 Helicobacter pylori Lithuania75 12352302 YP_005773336.1 CDS HPLT_06155 NC_017362.1 1233317 1233859 D hypothetical protein 1233317..1233859 Helicobacter pylori Lithuania75 12352303 YP_005773337.1 CDS HPLT_06160 NC_017362.1 1233856 1234512 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1233856..1234512 Helicobacter pylori Lithuania75 12352304 YP_005773338.1 CDS HPLT_06165 NC_017362.1 1234509 1235651 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1234509..1235651 Helicobacter pylori Lithuania75 12352305 YP_005773339.1 CDS HPLT_06170 NC_017362.1 1235678 1236139 R hypothetical protein complement(1235678..1236139) Helicobacter pylori Lithuania75 12352306 YP_005773340.1 CDS HPLT_06175 NC_017362.1 1236526 1237422 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; hypothetical protein 1236526..1237422 Helicobacter pylori Lithuania75 12352307 YP_005773341.1 CDS HPLT_06180 NC_017362.1 1237426 1238673 D hypothetical protein 1237426..1238673 Helicobacter pylori Lithuania75 12352308 YP_005773342.1 CDS HPLT_06185 NC_017362.1 1238752 1239303 D COG2952 Uncharacterized protein conserved in bacteria; hypothetical protein 1238752..1239303 Helicobacter pylori Lithuania75 12352309 YP_005773343.1 CDS HPLT_06190 NC_017362.1 1239303 1240430 D COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 1239303..1240430 Helicobacter pylori Lithuania75 12352310 YP_005773344.1 CDS amiF NC_017362.1 1240594 1241598 D COG0388 Predicted amidohydrolase; formamidase 1240594..1241598 Helicobacter pylori Lithuania75 12352311 YP_005773345.1 CDS HPLT_06200 NC_017362.1 1241694 1241936 R hypothetical protein complement(1241694..1241936) Helicobacter pylori Lithuania75 12352312 YP_005773346.1 CDS HPLT_06205 NC_017362.1 1242326 1242550 R hypothetical protein complement(1242326..1242550) Helicobacter pylori Lithuania75 12352313 YP_005773347.1 CDS HPLT_06210 NC_017362.1 1242659 1243231 R COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein complement(1242659..1243231) Helicobacter pylori Lithuania75 12352314 YP_005773348.1 CDS alaS NC_017362.1 1243233 1245776 R COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase complement(1243233..1245776) Helicobacter pylori Lithuania75 12352315 YP_005773349.1 CDS HPLT_06220 NC_017362.1 1245896 1246126 D COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein 1245896..1246126 Helicobacter pylori Lithuania75 12352316 YP_005773350.1 CDS HPLT_06225 NC_017362.1 1246212 1246319 R hypothetical protein complement(1246212..1246319) Helicobacter pylori Lithuania75 12352317 YP_005773351.1 CDS HPLT_06230 NC_017362.1 1246798 1249032 R outer membrane protein BabA complement(1246798..1249032) Helicobacter pylori Lithuania75 12352318 YP_005773352.1 CDS HPLT_06235 NC_017362.1 1249228 1249371 D hypothetical protein 1249228..1249371 Helicobacter pylori Lithuania75 12352319 YP_005773353.1 CDS rpsR NC_017362.1 1249624 1249881 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(1249624..1249881) Helicobacter pylori Lithuania75 12352320 YP_005773354.1 CDS HPLT_06245 NC_017362.1 1249904 1250449 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(1249904..1250449) Helicobacter pylori Lithuania75 12352321 YP_005773355.1 CDS rpsF NC_017362.1 1250459 1250887 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(1250459..1250887) Helicobacter pylori Lithuania75 12352322 YP_005773356.1 CDS HPLT_06255 NC_017362.1 1250884 1251015 R hypothetical protein complement(1250884..1251015) Helicobacter pylori Lithuania75 12352323 YP_005773357.1 CDS HPLT_06260 NC_017362.1 1251040 1252062 R COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta complement(1251040..1252062) Helicobacter pylori Lithuania75 12352324 YP_005773358.1 CDS HPLT_06265 NC_017362.1 1252052 1253986 R COG0557 Exoribonuclease R; ribonuclease R complement(1252052..1253986) Helicobacter pylori Lithuania75 12352325 YP_005773359.1 CDS aroE NC_017362.1 1253986 1254777 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1253986..1254777) Helicobacter pylori Lithuania75 12352326 YP_005773360.1 CDS HPLT_06275 NC_017362.1 1254785 1255363 R hypothetical protein complement(1254785..1255363) Helicobacter pylori Lithuania75 12352327 YP_005773361.1 CDS HPLT_06280 NC_017362.1 1255384 1256430 R COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide ABC transporter permease complement(1255384..1256430) Helicobacter pylori Lithuania75 12352328 YP_005773362.1 CDS HPLT_06285 NC_017362.1 1256427 1258211 R COG4166 ABC-type oligopeptide transport system, periplasmic component; peptide/nickel transport system substrate-binding protein complement(1256427..1258211) Helicobacter pylori Lithuania75 12352329 YP_005773363.1 CDS HPLT_06290 NC_017362.1 1258212 1259192 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1258212..1259192) Helicobacter pylori Lithuania75 12352330 YP_005773364.1 CDS HPLT_06295 NC_017362.1 1259263 1259985 R COG0500 SAM-dependent methyltransferases; biotin synthase complement(1259263..1259985) Helicobacter pylori Lithuania75 12352331 YP_005773365.1 CDS secG NC_017362.1 1260109 1260699 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1260109..1260699 Helicobacter pylori Lithuania75 12352332 YP_005773366.1 CDS frr NC_017362.1 1260699 1261256 D COG0233 Ribosome recycling factor; ribosome recycling factor 1260699..1261256 Helicobacter pylori Lithuania75 12352333 YP_005773367.1 CDS pyrE NC_017362.1 1261260 1261865 D COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1261260..1261865 Helicobacter pylori Lithuania75 12352334 YP_005773368.1 CDS HPLT_06315 NC_017362.1 1261862 1261960 R hypothetical protein complement(1261862..1261960) Helicobacter pylori Lithuania75 12352335 YP_005773369.1 CDS HPLT_06320 NC_017362.1 1261971 1262318 D COG1714 Predicted membrane protein/domain; hypothetical protein 1261971..1262318 Helicobacter pylori Lithuania75 12352336 YP_005773370.1 CDS HPLT_06325 NC_017362.1 1262315 1263004 D COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 1262315..1263004 Helicobacter pylori Lithuania75 12352337 YP_005773371.1 CDS HPLT_06330 NC_017362.1 1263112 1263513 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1263112..1263513 Helicobacter pylori Lithuania75 12352338 YP_005773372.1 CDS HPLT_06335 NC_017362.1 1263513 1263992 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1263513..1263992 Helicobacter pylori Lithuania75 12352339 YP_005773373.1 CDS HPLT_06340 NC_017362.1 1263992 1264789 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C 1263992..1264789 Helicobacter pylori Lithuania75 12352340 YP_005773374.1 CDS HPLT_06345 NC_017362.1 1264791 1266020 D COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D 1264791..1266020 Helicobacter pylori Lithuania75 12352341 YP_005773375.1 CDS HPLT_06350 NC_017362.1 1266017 1266247 D putative NADH oxidoreductase I 1266017..1266247 Helicobacter pylori Lithuania75 12352342 YP_005773376.1 CDS HPLT_06355 NC_017362.1 1266250 1267236 D NADH dehydrogenase I subunit F 1266250..1267236 Helicobacter pylori Lithuania75 12352343 YP_005773377.1 CDS HPLT_06360 NC_017362.1 1267233 1269797 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1267233..1269797 Helicobacter pylori Lithuania75 12352344 YP_005773378.1 CDS HPLT_06365 NC_017362.1 1269794 1270783 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH dehydrogenase subunit H 1269794..1270783 Helicobacter pylori Lithuania75 12352345 YP_005773379.1 CDS HPLT_06370 NC_017362.1 1270794 1271456 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1270794..1271456 Helicobacter pylori Lithuania75 12352346 YP_005773380.1 CDS HPLT_06375 NC_017362.1 1271449 1271997 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH dehydrogenase subunit J 1271449..1271997 Helicobacter pylori Lithuania75 12352347 YP_005773381.1 CDS HPLT_06380 NC_017362.1 1271994 1272296 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH dehydrogenase subunit K 1271994..1272296 Helicobacter pylori Lithuania75 12352348 YP_005773382.1 CDS HPLT_06385 NC_017362.1 1272299 1274137 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH dehydrogenase subunit L 1272299..1274137 Helicobacter pylori Lithuania75 12352349 YP_005773383.1 CDS HPLT_06390 NC_017362.1 1274141 1275679 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH dehydrogenase subunit M 1274141..1275679 Helicobacter pylori Lithuania75 12352350 YP_005773384.1 CDS HPLT_06395 NC_017362.1 1275666 1277138 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH dehydrogenase subunit N 1275666..1277138 Helicobacter pylori Lithuania75 12352351 YP_005773385.1 CDS HPLT_06400 NC_017362.1 1277128 1279533 D COG0457 FOG: TPR repeat; paralysed flagella protein 1277128..1279533 Helicobacter pylori Lithuania75 12352352 YP_005773386.1 CDS HPLT_06405 NC_017362.1 1279535 1280914 D COG1109 Phosphomannomutase; phosphomannomutase 1279535..1280914 Helicobacter pylori Lithuania75 12352353 YP_005773387.1 CDS HPLT_06410 NC_017362.1 1281091 1281375 D hypothetical protein 1281091..1281375 Helicobacter pylori Lithuania75 12352354 YP_005773388.1 CDS trpA NC_017362.1 1281706 1282494 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1281706..1282494) Helicobacter pylori Lithuania75 12352355 YP_005773389.1 CDS HPLT_06420 NC_017362.1 1282496 1283671 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(1282496..1283671) Helicobacter pylori Lithuania75 12352356 YP_005773390.1 CDS HPLT_06425 NC_017362.1 1283673 1285031 R COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1283673..1285031) Helicobacter pylori Lithuania75 12352357 YP_005773391.1 CDS trpD NC_017362.1 1285024 1286031 R COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(1285024..1286031) Helicobacter pylori Lithuania75 12352358 YP_005773392.1 CDS HPLT_06435 NC_017362.1 1286028 1286612 R COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II complement(1286028..1286612) Helicobacter pylori Lithuania75 12352359 YP_005773393.1 CDS HPLT_06440 NC_017362.1 1286609 1288111 R COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(1286609..1288111) Helicobacter pylori Lithuania75 12352360 YP_005773394.1 CDS HPLT_06445 NC_017362.1 1288333 1289790 R COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein complement(1288333..1289790) Helicobacter pylori Lithuania75 12352361 YP_005773395.1 CDS HPLT_06450 NC_017362.1 1289887 1290927 R COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein complement(1289887..1290927) Helicobacter pylori Lithuania75 12352362 YP_005773396.1 CDS HPLT_06455 NC_017362.1 1290995 1291687 R COG2503 Predicted secreted acid phosphatase; acid phosphatase lipoprotein complement(1290995..1291687) Helicobacter pylori Lithuania75 12352363 YP_005773397.1 CDS HPLT_06460 NC_017362.1 1291856 1292404 D COG2353 Uncharacterized conserved protein; hypothetical protein 1291856..1292404 Helicobacter pylori Lithuania75 12352364 YP_005773398.1 CDS HPLT_06465 NC_017362.1 1292987 1293652 D COG0819 Putative transcription activator; transcriptional activator TenA 1292987..1293652 Helicobacter pylori Lithuania75 12352365 YP_005773399.1 CDS HPLT_06470 NC_017362.1 1293762 1294424 D COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter 1293762..1294424 Helicobacter pylori Lithuania75 12352366 YP_005773400.1 CDS HPLT_06475 NC_017362.1 1294412 1295026 D COG1564 Thiamine pyrophosphokinase; thiamine pyrophosphokinase 1294412..1295026 Helicobacter pylori Lithuania75 12352367 YP_005773401.1 CDS HPLT_06480 NC_017362.1 1295535 1295627 R hypothetical protein complement(1295535..1295627) Helicobacter pylori Lithuania75 12352368 YP_005773402.1 CDS rplQ NC_017362.1 1295658 1296008 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(1295658..1296008) Helicobacter pylori Lithuania75 12352369 YP_005773403.1 CDS HPLT_06490 NC_017362.1 1296008 1297042 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(1296008..1297042) Helicobacter pylori Lithuania75 12352370 YP_005773404.1 CDS rpsD NC_017362.1 1297054 1297680 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(1297054..1297680) Helicobacter pylori Lithuania75 12352371 YP_005773405.1 CDS HPLT_06500 NC_017362.1 1297690 1298085 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(1297690..1298085) Helicobacter pylori Lithuania75 12352372 YP_005773406.1 CDS rpsM NC_017362.1 1298108 1298470 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(1298108..1298470) Helicobacter pylori Lithuania75 12352373 YP_005773407.1 CDS HPLT_06510 NC_017362.1 1298474 1298587 R COG0257 Ribosomal protein L36; hypothetical protein complement(1298474..1298587) Helicobacter pylori Lithuania75 12352374 YP_005773408.1 CDS infA NC_017362.1 1298665 1298883 R COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(1298665..1298883) Helicobacter pylori Lithuania75 12352375 YP_005773409.1 CDS HPLT_06520 NC_017362.1 1298883 1299644 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1298883..1299644) Helicobacter pylori Lithuania75 12352376 YP_005773410.1 CDS secY NC_017362.1 1299644 1300906 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(1299644..1300906) Helicobacter pylori Lithuania75 12352377 YP_005773411.1 CDS rplO NC_017362.1 1300944 1301345 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(1300944..1301345) Helicobacter pylori Lithuania75 12352378 YP_005773412.1 CDS rpsE NC_017362.1 1301359 1301802 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(1301359..1301802) Helicobacter pylori Lithuania75 12352379 YP_005773413.1 CDS rplR NC_017362.1 1301817 1302173 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(1301817..1302173) Helicobacter pylori Lithuania75 12352380 YP_005773414.1 CDS rplF NC_017362.1 1302187 1302723 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(1302187..1302723) Helicobacter pylori Lithuania75 12352381 YP_005773415.1 CDS rpsH NC_017362.1 1302734 1303129 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(1302734..1303129) Helicobacter pylori Lithuania75 12352382 YP_005773416.1 CDS rpsN NC_017362.1 1303139 1303324 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(1303139..1303324) Helicobacter pylori Lithuania75 12352383 YP_005773417.1 CDS rplE NC_017362.1 1303334 1303879 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(1303334..1303879) Helicobacter pylori Lithuania75 12352384 YP_005773418.1 CDS rplX NC_017362.1 1303892 1304113 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(1303892..1304113) Helicobacter pylori Lithuania75 12352385 YP_005773419.1 CDS rplN NC_017362.1 1304113 1304481 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(1304113..1304481) Helicobacter pylori Lithuania75 12352386 YP_005773420.1 CDS rpsQ NC_017362.1 1304484 1304744 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(1304484..1304744) Helicobacter pylori Lithuania75 12352387 YP_005773421.1 CDS HPLT_06580 NC_017362.1 1304758 1304958 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(1304758..1304958) Helicobacter pylori Lithuania75 12352388 YP_005773422.1 CDS rplP NC_017362.1 1304945 1305370 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(1304945..1305370) Helicobacter pylori Lithuania75 12352389 YP_005773423.1 CDS rpsC NC_017362.1 1305373 1306077 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(1305373..1306077) Helicobacter pylori Lithuania75 12352390 YP_005773424.1 CDS rplV NC_017362.1 1306081 1306449 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(1306081..1306449) Helicobacter pylori Lithuania75 12352391 YP_005773425.1 CDS rpsS NC_017362.1 1306459 1306740 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(1306459..1306740) Helicobacter pylori Lithuania75 12352392 YP_005773426.1 CDS rplB NC_017362.1 1306751 1307581 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(1306751..1307581) Helicobacter pylori Lithuania75 12352393 YP_005773427.1 CDS rplW NC_017362.1 1307598 1307879 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(1307598..1307879) Helicobacter pylori Lithuania75 12352394 YP_005773428.1 CDS rplD NC_017362.1 1307883 1308530 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(1307883..1308530) Helicobacter pylori Lithuania75 12352395 YP_005773429.1 CDS rplC NC_017362.1 1308565 1309140 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(1308565..1309140) Helicobacter pylori Lithuania75 12352396 YP_005773430.1 CDS rpsJ NC_017362.1 1309177 1309491 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(1309177..1309491) Helicobacter pylori Lithuania75 12352397 YP_005773431.1 CDS HPLT_06630 NC_017362.1 1309701 1310789 D COG1373 Predicted ATPase (AAA+ superfamily); hypothetical protein 1309701..1310789 Helicobacter pylori Lithuania75 12352398 YP_005773432.1 CDS HPLT_06635 NC_017362.1 1311023 1311601 D hypothetical protein 1311023..1311601 Helicobacter pylori Lithuania75 12352399 YP_005773433.1 CDS rnhB NC_017362.1 1311575 1312189 R COG0164 Ribonuclease HII; ribonuclease HII complement(1311575..1312189) Helicobacter pylori Lithuania75 12352400 YP_005773434.1 CDS HPLT_06645 NC_017362.1 1312186 1313079 R hypothetical protein complement(1312186..1313079) Helicobacter pylori Lithuania75 12352401 YP_005773435.1 CDS HPLT_06650 NC_017362.1 1313106 1314818 R COG0542 ATPases with chaperone activity, ATP-binding subunit; hypothetical protein complement(1313106..1314818) Helicobacter pylori Lithuania75 12352402 YP_005773436.1 CDS fumC NC_017362.1 1314822 1316213 R COG0114 Fumarase; fumarate hydratase complement(1314822..1316213) Helicobacter pylori Lithuania75 12352403 YP_005773437.1 CDS HPLT_06660 NC_017362.1 1316389 1316766 D hypothetical protein 1316389..1316766 Helicobacter pylori Lithuania75 12352404 YP_005773438.1 CDS HPLT_06665 NC_017362.1 1316813 1318009 D hypothetical protein 1316813..1318009 Helicobacter pylori Lithuania75 12352405 YP_005773439.1 CDS HPLT_06670 NC_017362.1 1318006 1319022 D COG0845 Membrane-fusion protein; cation efflux system protein 1318006..1319022 Helicobacter pylori Lithuania75 12352406 YP_005773440.1 CDS HPLT_06675 NC_017362.1 1319023 1322130 D COG3696 Putative silver efflux pump; putative heavy metal efflux pump CzcA 1319023..1322130 Helicobacter pylori Lithuania75 12352407 YP_005773441.1 CDS HPLT_06680 NC_017362.1 1322111 1322467 R COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance); hypothetical protein complement(1322111..1322467) Helicobacter pylori Lithuania75 12352408 YP_005773442.1 CDS HPLT_06685 NC_017362.1 1322461 1323147 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); hypothetical protein complement(1322461..1323147) Helicobacter pylori Lithuania75 12352409 YP_005773443.1 CDS HPLT_06690 NC_017362.1 1323158 1324267 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(1323158..1324267) Helicobacter pylori Lithuania75 12352410 YP_005773444.1 CDS HPLT_06695 NC_017362.1 1324392 1325534 D hypothetical protein 1324392..1325534 Helicobacter pylori Lithuania75 12352411 YP_005773445.1 CDS mnmA NC_017362.1 1325578 1326606 R COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA complement(1325578..1326606) Helicobacter pylori Lithuania75 12352412 YP_005773446.1 CDS HPLT_06705 NC_017362.1 1326745 1327506 D COG2214 DnaJ-class molecular chaperone; hypothetical protein 1326745..1327506 Helicobacter pylori Lithuania75 12352413 YP_005773447.1 CDS HPLT_06710 NC_017362.1 1327503 1328018 R COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinate-nucleotide adenyltransferase complement(1327503..1328018) Helicobacter pylori Lithuania75 12352414 YP_005773448.1 CDS HPLT_06715 NC_017362.1 1328011 1328457 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator complement(1328011..1328457) Helicobacter pylori Lithuania75 12352415 YP_005773449.1 CDS HPLT_06720 NC_017362.1 1328780 1329217 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1328780..1329217 Helicobacter pylori Lithuania75 12352416 YP_005773450.1 CDS HPLT_06725 NC_017362.1 1329214 1329603 D COG0848 Biopolymer transport protein; biopolymer transport protein exbD 1329214..1329603 Helicobacter pylori Lithuania75 12352417 YP_005773451.1 CDS HPLT_06730 NC_017362.1 1329569 1330420 D COG0810 Periplasmic protein TonB, links inner and outer membranes; siderophore-mediated iron transport protein 1329569..1330420 Helicobacter pylori Lithuania75 12352418 YP_005773452.1 CDS HPLT_06735 NC_017362.1 1330686 1332689 D outer membrane protein 1330686..1332689 Helicobacter pylori Lithuania75 12352419 YP_005773453.1 CDS HPLT_06740 NC_017362.1 1332817 1333545 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(1332817..1333545) Helicobacter pylori Lithuania75 12352420 YP_005773454.1 CDS HPLT_06745 NC_017362.1 1333552 1334508 R COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein complement(1333552..1334508) Helicobacter pylori Lithuania75 12352421 YP_005773455.1 CDS pgk NC_017362.1 1334524 1335732 R COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase complement(1334524..1335732) Helicobacter pylori Lithuania75 12352422 YP_005773456.1 CDS HPLT_06755 NC_017362.1 1335748 1336740 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1335748..1336740) Helicobacter pylori Lithuania75 12352423 YP_005773457.1 CDS HPLT_06760 NC_017362.1 1336829 1337530 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(1336829..1337530) Helicobacter pylori Lithuania75 12352424 YP_005773458.1 CDS HPLT_06765 NC_017362.1 1337527 1338228 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1337527..1338228) Helicobacter pylori Lithuania75 12352425 YP_005773459.1 CDS HPLT_06770 NC_017362.1 1338215 1339330 R hypothetical protein complement(1338215..1339330) Helicobacter pylori Lithuania75 12352426 YP_005773460.1 CDS HPLT_06775 NC_017362.1 1339393 1340757 R COG0793 Periplasmic protease; carboxyl-terminal protease complement(1339393..1340757) Helicobacter pylori Lithuania75 12352427 YP_005773461.1 CDS HPLT_06780 NC_017362.1 1340983 1341855 R Type II restriction endonuclease complement(1340983..1341855) Helicobacter pylori Lithuania75 12352428 YP_005773462.1 CDS HPLT_06785 NC_017362.1 1341855 1342934 R COG0863 DNA modification methylase; adenine specific DNA methyltransferase complement(1341855..1342934) Helicobacter pylori Lithuania75 12352429 YP_005773463.1 CDS HPLT_06790 NC_017362.1 1343054 1344007 R COG4889 Predicted helicase; hypothetical protein complement(1343054..1344007) Helicobacter pylori Lithuania75 12352430 YP_005773464.1 CDS HPLT_06795 NC_017362.1 1344153 1346672 R COG0286 Type I restriction-modification system methyltransferase subunit; putative adenine specific DNA methyltransferase complement(1344153..1346672) Helicobacter pylori Lithuania75 12352431 YP_005773465.1 CDS HPLT_06800 NC_017362.1 1346697 1347518 R COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(1346697..1347518) Helicobacter pylori Lithuania75 12352432 YP_005773466.1 CDS HPLT_06805 NC_017362.1 1347518 1348042 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1347518..1348042) Helicobacter pylori Lithuania75 12352433 YP_005773467.1 CDS HPLT_06810 NC_017362.1 1348027 1348527 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1348027..1348527) Helicobacter pylori Lithuania75 12352434 YP_005773468.1 CDS HPLT_06815 NC_017362.1 1348517 1349320 R COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase complement(1348517..1349320) Helicobacter pylori Lithuania75 12352435 YP_005773469.1 CDS HPLT_06820 NC_017362.1 1349314 1349820 R hypothetical protein complement(1349314..1349820) Helicobacter pylori Lithuania75 12352436 YP_005773470.1 CDS HPLT_06825 NC_017362.1 1349833 1350327 R hypothetical protein complement(1349833..1350327) Helicobacter pylori Lithuania75 12352437 YP_005773471.1 CDS ubiA NC_017362.1 1350320 1351204 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase complement(1350320..1351204) Helicobacter pylori Lithuania75 12352438 YP_005773472.1 CDS HPLT_06835 NC_017362.1 1351231 1352544 R COG0658 Predicted membrane metal-binding protein; competence locus E ComE3 complement(1351231..1352544) Helicobacter pylori Lithuania75 12352439 YP_005773473.1 CDS HPLT_06840 NC_017362.1 1352541 1354007 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(1352541..1354007) Helicobacter pylori Lithuania75 12352440 YP_005773474.1 CDS HPLT_06845 NC_017362.1 1354018 1355412 R COG0062 Uncharacterized conserved protein; hypothetical protein complement(1354018..1355412) Helicobacter pylori Lithuania75 12352441 YP_005773475.1 CDS HPLT_06850 NC_017362.1 1355415 1356548 R COG0642 Signal transduction histidine kinase; signal-transducing protein, histidine kinase complement(1355415..1356548) Helicobacter pylori Lithuania75 12352442 YP_005773476.1 CDS HPLT_06855 NC_017362.1 1356583 1357224 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; response regulator complement(1356583..1357224) Helicobacter pylori Lithuania75 12352443 YP_005773477.1 CDS HPLT_06860 NC_017362.1 1357306 1358577 R COG0466 ATP-dependent Lon protease, bacterial type; type IIS restriction enzyme R protein (MBOIIR) complement(1357306..1358577) Helicobacter pylori Lithuania75 12352444 YP_005773478.1 CDS HPLT_06865 NC_017362.1 1358599 1359375 R COG0863 DNA modification methylase; type IIS restriction enzyme M1 protein (mod) complement(1358599..1359375) Helicobacter pylori Lithuania75 12352445 YP_005773479.1 CDS HPLT_06870 NC_017362.1 1359362 1360225 R COG0863 DNA modification methylase; type IIS restriction enzyme M2 protein (mod) complement(1359362..1360225) Helicobacter pylori Lithuania75 12352446 YP_005773480.1 CDS HPLT_06875 NC_017362.1 1360396 1361508 D type III restriction enzyme R protein 1360396..1361508 Helicobacter pylori Lithuania75 12352447 YP_005773481.1 CDS HPLT_06880 NC_017362.1 1361553 1362299 R COG1792 Cell shape-determining protein; rod shape-determining protein MreC complement(1361553..1362299) Helicobacter pylori Lithuania75 12352448 YP_005773482.1 CDS HPLT_06885 NC_017362.1 1362303 1363346 R COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB complement(1362303..1363346) Helicobacter pylori Lithuania75 12352449 YP_005773483.1 CDS clpX NC_017362.1 1363389 1364735 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1363389..1364735) Helicobacter pylori Lithuania75 12352450 YP_005773484.1 CDS HPLT_06895 NC_017362.1 1364737 1365549 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(1364737..1365549) Helicobacter pylori Lithuania75 12352451 YP_005773485.1 CDS fabZ NC_017362.1 1365552 1366031 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(1365552..1366031) Helicobacter pylori Lithuania75 12352452 YP_005773486.1 CDS HPLT_06905 NC_017362.1 1366213 1366602 R COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW complement(1366213..1366602) Helicobacter pylori Lithuania75 12352453 YP_005773487.1 CDS HPLT_06910 NC_017362.1 1366819 1366965 D hypothetical protein 1366819..1366965 Helicobacter pylori Lithuania75 12352454 YP_005773488.1 CDS HPLT_06915 NC_017362.1 1367001 1367663 D COG4105 DNA uptake lipoprotein; hypothetical protein 1367001..1367663 Helicobacter pylori Lithuania75 12352455 YP_005773489.1 CDS HPLT_06920 NC_017362.1 1367705 1370209 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 1367705..1370209 Helicobacter pylori Lithuania75 12352456 YP_005773490.1 CDS HPLT_06925 NC_017362.1 1370206 1371045 D COG0287 Prephenate dehydrogenase; prephenate dehydrogenase 1370206..1371045 Helicobacter pylori Lithuania75 12352457 YP_005773491.1 CDS HPLT_06930 NC_017362.1 1371364 1372227 R COG1864 DNA/RNA endonuclease G, NUC1; putative endonuclease G complement(1371364..1372227) Helicobacter pylori Lithuania75 12352458 YP_005773492.1 CDS HPLT_06935 NC_017362.1 1372512 1374452 R COG2189 Adenine specific DNA methylase Mod; type III restriction-modification system: methyltransferase complement(1372512..1374452) Helicobacter pylori Lithuania75 12352459 YP_005773493.1 CDS HPLT_06940 NC_017362.1 1374455 1376788 R COG3421 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1374455..1376788) Helicobacter pylori Lithuania75 12352460 YP_005773494.1 CDS HPLT_06945 NC_017362.1 1377199 1378044 D COG0502 Biotin synthase and related enzymes; biotin synthase 1377199..1378044 Helicobacter pylori Lithuania75 12352461 YP_005773495.1 CDS HPLT_06950 NC_017362.1 1378044 1378922 D COG1295 Predicted membrane protein; putative ribonuclease N 1378044..1378922 Helicobacter pylori Lithuania75 12352462 YP_005773496.1 CDS HPLT_06960 NC_017362.1 1383319 1383453 R hypothetical protein complement(1383319..1383453) Helicobacter pylori Lithuania75 12352465 YP_005773497.1 CDS HPLT_06965 NC_017362.1 1383443 1383559 R hypothetical protein complement(1383443..1383559) Helicobacter pylori Lithuania75 12352466 YP_005773498.1 CDS HPLT_06970 NC_017362.1 1383553 1383939 D hypothetical protein 1383553..1383939 Helicobacter pylori Lithuania75 12352467 YP_005773499.1 CDS HPLT_06975 NC_017362.1 1383939 1384379 D hypothetical protein 1383939..1384379 Helicobacter pylori Lithuania75 12352468 YP_005773500.1 CDS HPLT_06980 NC_017362.1 1384423 1386219 D COG1479 Uncharacterized conserved protein; hypothetical protein 1384423..1386219 Helicobacter pylori Lithuania75 12352469 YP_005773501.1 CDS HPLT_06985 NC_017362.1 1386359 1387228 D hypothetical protein 1386359..1387228 Helicobacter pylori Lithuania75 12352470 YP_005773502.1 CDS HPLT_06990 NC_017362.1 1387338 1387784 R COG0780 Enzyme related to GTP cyclohydrolase I; 7-cyano-7-deazaguanine reductase complement(1387338..1387784) Helicobacter pylori Lithuania75 12352471 YP_005773503.1 CDS HPLT_06995 NC_017362.1 1387844 1388185 D COG0799 Uncharacterized homolog of plant Iojap protein; iojap-like protein 1387844..1388185 Helicobacter pylori Lithuania75 12352473 YP_005773504.1 CDS miaA NC_017362.1 1388256 1389089 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1388256..1389089 Helicobacter pylori Lithuania75 12352475 YP_005773505.1 CDS HPLT_07005 NC_017362.1 1389132 1390193 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein; putative LPS glycosyltransferase 1389132..1390193 Helicobacter pylori Lithuania75 12352476 YP_005773506.1 CDS HPLT_07020 NC_017362.1 1391284 1391862 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein 1391284..1391862 Helicobacter pylori Lithuania75 12352477 YP_005773507.1 CDS murB NC_017362.1 1391936 1392715 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1391936..1392715) Helicobacter pylori Lithuania75 12352478 YP_005773508.1 CDS fliQ NC_017362.1 1392719 1392985 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(1392719..1392985) Helicobacter pylori Lithuania75 12352479 YP_005773509.1 CDS fliI NC_017362.1 1392996 1394300 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(1392996..1394300) Helicobacter pylori Lithuania75 12352480 YP_005773510.1 CDS HPLT_07040 NC_017362.1 1394301 1395215 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; type IV secretion system ATPase complement(1394301..1395215) Helicobacter pylori Lithuania75 12352481 YP_005773511.1 CDS ileS NC_017362.1 1395232 1397994 R COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1395232..1397994) Helicobacter pylori Lithuania75 12352482 YP_005773512.1 CDS HPLT_07050 NC_017362.1 1398019 1398273 R COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); putative RNA binding protein complement(1398019..1398273) Helicobacter pylori Lithuania75 12352483 YP_005773513.1 CDS HPLT_07055 NC_017362.1 1398375 1398995 D hypothetical protein 1398375..1398995 Helicobacter pylori Lithuania75 12352484 YP_005773514.1 CDS HPLT_07060 NC_017362.1 1399333 1399590 R hypothetical protein complement(1399333..1399590) Helicobacter pylori Lithuania75 12352485 YP_005773515.1 CDS HPLT_07065 NC_017362.1 1399778 1400851 R COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N complement(1399778..1400851) Helicobacter pylori Lithuania75 12352486 YP_005773516.1 CDS HPLT_07070 NC_017362.1 1400848 1401837 R COG0794 Predicted sugar phosphate isomerase involved in capsule formation; polysialic acid capsule expression protein (kpsF) complement(1400848..1401837) Helicobacter pylori Lithuania75 12352487 YP_005773517.1 CDS HPLT_07075 NC_017362.1 1401821 1403890 R COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; hypothetical protein complement(1401821..1403890) Helicobacter pylori Lithuania75 12352488 YP_005773518.1 CDS ksgA NC_017362.1 1403928 1404743 R COG0030 Dimethyladenosine transferase (rRNA methylation); dimethyladenosine transferase complement(1403928..1404743) Helicobacter pylori Lithuania75 12352489 YP_005773519.1 CDS HPLT_07085 NC_017362.1 1405008 1405289 D hypothetical protein 1405008..1405289 Helicobacter pylori Lithuania75 12352490 YP_005773520.1 CDS HPLT_07090 NC_017362.1 1405875 1408331 R hypothetical protein complement(1405875..1408331) Helicobacter pylori Lithuania75 12352491 YP_005773521.1 CDS HPLT_07095 NC_017362.1 1408332 1409213 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate hydrolase complement(1408332..1409213) Helicobacter pylori Lithuania75 12352492 YP_005773522.1 CDS HPLT_07100 NC_017362.1 1409216 1410094 R COG0616 Periplasmic serine proteases (ClpP class); protease IV (PspA) complement(1409216..1410094) Helicobacter pylori Lithuania75 12352493 YP_005773523.1 CDS HPLT_07105 NC_017362.1 1410165 1410425 D hypothetical protein 1410165..1410425 Helicobacter pylori Lithuania75 12352494 YP_005773524.1 CDS HPLT_07110 NC_017362.1 1410661 1410861 D hypothetical protein 1410661..1410861 Helicobacter pylori Lithuania75 12352495 YP_005773525.1 CDS HPLT_07115 NC_017362.1 1410909 1411250 D hypothetical protein 1410909..1411250 Helicobacter pylori Lithuania75 12352496 YP_005773526.1 CDS HPLT_07120 NC_017362.1 1411366 1412484 D lipoprotein 1411366..1412484 Helicobacter pylori Lithuania75 12352497 YP_005773527.1 CDS HPLT_07125 NC_017362.1 1412495 1412947 D hypothetical protein 1412495..1412947 Helicobacter pylori Lithuania75 12352498 YP_005773528.1 CDS HPLT_07130 NC_017362.1 1413002 1413145 R hypothetical protein complement(1413002..1413145) Helicobacter pylori Lithuania75 12352499 YP_005773529.1 CDS HPLT_07135 NC_017362.1 1415602 1416381 R hypothetical protein complement(1415602..1416381) Helicobacter pylori Lithuania75 12352501 YP_005773530.1 CDS HPLT_07140 NC_017362.1 1416503 1416991 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolylcis-transisomeraseB, cyclosporin- type rotamase 1416503..1416991 Helicobacter pylori Lithuania75 12352502 YP_005773531.1 CDS HPLT_07145 NC_017362.1 1417011 1417241 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 1417011..1417241 Helicobacter pylori Lithuania75 12352503 YP_005773532.1 CDS HPLT_07150 NC_017362.1 1417241 1418044 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1417241..1418044 Helicobacter pylori Lithuania75 12352504 YP_005773533.1 CDS smpB NC_017362.1 1418041 1418499 D COG0691 tmRNA-binding protein; SsrA-binding protein 1418041..1418499 Helicobacter pylori Lithuania75 12352505 YP_005773534.1 CDS HPLT_07160 NC_017362.1 1418502 1418954 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1418502..1418954 Helicobacter pylori Lithuania75 12352506 YP_005773535.1 CDS HPLT_07165 NC_017362.1 1418965 1419366 D COG0848 Biopolymer transport protein; biopolymer transport protein 1418965..1419366 Helicobacter pylori Lithuania75 12352507 YP_005773536.1 CDS rpmH NC_017362.1 1419438 1419572 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 1419438..1419572 Helicobacter pylori Lithuania75 12352508 YP_005773537.1 CDS HPLT_07175 NC_017362.1 1419532 1420017 D COG0594 RNase P protein component; ribonuclease P protein component 1419532..1420017 Helicobacter pylori Lithuania75 12352510 YP_005773538.1 CDS HPLT_07180 NC_017362.1 1420004 1420357 D COG0759 Uncharacterized conserved protein; hypothetical protein 1420004..1420357 Helicobacter pylori Lithuania75 12352511 YP_005773539.1 CDS HPLT_07185 NC_017362.1 1420363 1422003 D COG0706 Preprotein translocase subunit YidC; putative inner membrane protein translocase component YidC 1420363..1422003 Helicobacter pylori Lithuania75 12352512 YP_005773540.1 CDS trmE NC_017362.1 1422789 1424141 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1422789..1424141 Helicobacter pylori Lithuania75 12352513 YP_005773541.1 CDS HPLT_07205 NC_017362.1 1424341 1426581 D Outer membrane protein HomD; putative signal peptide 1424341..1426581 Helicobacter pylori Lithuania75 12352514 YP_005773542.1 CDS HPLT_07210 NC_017362.1 1426600 1426764 R hypothetical protein complement(1426600..1426764) Helicobacter pylori Lithuania75 12352515 YP_005773543.1 CDS HPLT_07215 NC_017362.1 1427089 1427205 D hypothetical protein 1427089..1427205 Helicobacter pylori Lithuania75 12352516 YP_005773544.1 CDS HPLT_07220 NC_017362.1 1427394 1428305 R hypothetical protein complement(1427394..1428305) Helicobacter pylori Lithuania75 12352517 YP_005773545.1 CDS HPLT_07225 NC_017362.1 1428315 1428656 R COG0481 Membrane GTPase LepA; hypothetical protein complement(1428315..1428656) Helicobacter pylori Lithuania75 12352518 YP_005773546.1 CDS HPLT_07230 NC_017362.1 1428664 1429191 R Membrane-associated lipoprotein; putative signal peptide complement(1428664..1429191) Helicobacter pylori Lithuania75 12352519 YP_005773547.1 CDS HPLT_07235 NC_017362.1 1429215 1429847 R hypothetical protein complement(1429215..1429847) Helicobacter pylori Lithuania75 12352520 YP_005773548.1 CDS HPLT_07240 NC_017362.1 1430201 1430515 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(1430201..1430515) Helicobacter pylori Lithuania75 12352521 YP_005773549.1 CDS HPLT_07245 NC_017362.1 1430570 1431343 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; ribosomal large subunit pseudouridinesynthase B complement(1430570..1431343) Helicobacter pylori Lithuania75 12352522 YP_005773550.1 CDS dnaE NC_017362.1 1431340 1434975 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1431340..1434975) Helicobacter pylori Lithuania75 12352523 YP_005773551.1 CDS HPLT_07255 NC_017362.1 1435124 1436176 D COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 1435124..1436176 Helicobacter pylori Lithuania75 12352524 YP_005773552.1 CDS HPLT_07260 NC_017362.1 1436173 1436280 D hypothetical protein 1436173..1436280 Helicobacter pylori Lithuania75 12352525 YP_005773553.1 CDS HPLT_07265 NC_017362.1 1436359 1436946 R COG3187 Heat shock protein; putative secreted motility protein complement(1436359..1436946) Helicobacter pylori Lithuania75 12352526 YP_005773554.1 CDS HPLT_07270 NC_017362.1 1436965 1437642 R hypothetical protein complement(1436965..1437642) Helicobacter pylori Lithuania75 12352527 YP_005773555.1 CDS HPLT_07275 NC_017362.1 1437645 1438460 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transport system substrate binding protein complement(1437645..1438460) Helicobacter pylori Lithuania75 12352528 YP_005773556.1 CDS HPLT_07280 NC_017362.1 1438445 1439230 R COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein complement(1438445..1439230) Helicobacter pylori Lithuania75 12352529 YP_005773557.1 CDS HPLT_07285 NC_017362.1 1439230 1440363 R COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; putative ABC transport system permease complement(1439230..1440363) Helicobacter pylori Lithuania75 12352530 YP_005773558.1 CDS HPLT_07290 NC_017362.1 1440497 1441192 D outer membrane protein 1440497..1441192 Helicobacter pylori Lithuania75 12352531 YP_005773559.1 CDS HPLT_07295 NC_017362.1 1441197 1442219 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(1441197..1442219) Helicobacter pylori Lithuania75 12352532 YP_005773560.1 CDS HPLT_07300 NC_017362.1 1442271 1443017 R outer membrane protein complement(1442271..1443017) Helicobacter pylori Lithuania75 12352533 YP_005773561.1 CDS HPLT_07305 NC_017362.1 1443133 1445814 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I (polA) complement(1443133..1445814) Helicobacter pylori Lithuania75 12352534 YP_005773562.1 CDS HPLT_07310 NC_017362.1 1445880 1446497 R COG0732 Restriction endonuclease S subunits; type II restriction enzyme complement(1445880..1446497) Helicobacter pylori Lithuania75 12352535 YP_005773563.1 CDS HPLT_07315 NC_017362.1 1446460 1447101 R type II restriction enzyme complement(1446460..1447101) Helicobacter pylori Lithuania75 12352536 YP_005773564.1 CDS HPLT_07320 NC_017362.1 1447098 1449134 R COG0286 Type I restriction-modification system methyltransferase subunit; type IIS restriction enzyme M protein (mod) complement(1447098..1449134) Helicobacter pylori Lithuania75 12352537 YP_005773565.1 CDS HPLT_07325 NC_017362.1 1449166 1449741 R hypothetical protein complement(1449166..1449741) Helicobacter pylori Lithuania75 12352538 YP_005773566.1 CDS tmk NC_017362.1 1449729 1450304 R COG0125 Thymidylate kinase; thymidylate kinase complement(1449729..1450304) Helicobacter pylori Lithuania75 12352539 YP_005773567.1 CDS coaD NC_017362.1 1450306 1450779 R COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(1450306..1450779) Helicobacter pylori Lithuania75 12352540 YP_005773568.1 CDS HPLT_07340 NC_017362.1 1450779 1451342 R COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1450779..1451342) Helicobacter pylori Lithuania75 12352541 YP_005773569.1 CDS HPLT_07345 NC_017362.1 1451323 1451427 D hypothetical protein 1451323..1451427 Helicobacter pylori Lithuania75 12352542 YP_005773570.1 CDS flgA NC_017362.1 1451352 1452008 R COG1261 Flagellar basal body P-ring biosynthesis protein; flagellar basal body P-ring biosynthesis protein FlgA complement(1451352..1452008) Helicobacter pylori Lithuania75 12352543 YP_005773571.1 CDS HPLT_07355 NC_017362.1 1452005 1454053 R COG0210 Superfamily I DNA and RNA helicases; DNA helicase II (uvrD) complement(1452005..1454053) Helicobacter pylori Lithuania75 12352544 YP_005773572.1 CDS HPLT_07360 NC_017362.1 1454050 1456584 R COG0457 FOG: TPR repeat; hypothetical protein complement(1454050..1456584) Helicobacter pylori Lithuania75 12352545 YP_005773573.1 CDS HPLT_07365 NC_017362.1 1456594 1457841 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(1456594..1457841) Helicobacter pylori Lithuania75 12352546 YP_005773574.1 CDS HPLT_07370 NC_017362.1 1457842 1458639 R COG0388 Predicted amidohydrolase; hypothetical protein complement(1457842..1458639) Helicobacter pylori Lithuania75 12352547 YP_005773575.1 CDS HPLT_07375 NC_017362.1 1458643 1458903 R COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(1458643..1458903) Helicobacter pylori Lithuania75 12352548 YP_005773576.1 CDS ubiE NC_017362.1 1458913 1459653 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(1458913..1459653) Helicobacter pylori Lithuania75 12352549 YP_005773577.1 CDS HPLT_07385 NC_017362.1 1459680 1460126 R COG1981 Predicted membrane protein; hypothetical protein complement(1459680..1460126) Helicobacter pylori Lithuania75 12352550 YP_005773578.1 CDS HPLT_07390 NC_017362.1 1460137 1460709 R COG1739 Uncharacterized conserved protein; X-Pro dipeptidase complement(1460137..1460709) Helicobacter pylori Lithuania75 12352551 YP_005773579.1 CDS HPLT_07395 NC_017362.1 1460696 1461826 R COG0842 ABC-type multidrug transport system, permease component; antibiotic transport system permease complement(1460696..1461826) Helicobacter pylori Lithuania75 12352552 YP_005773580.1 CDS HPLT_07400 NC_017362.1 1461823 1462920 R COG0842 ABC-type multidrug transport system, permease component; hypothetical protein complement(1461823..1462920) Helicobacter pylori Lithuania75 12352553 YP_005773581.1 CDS HPLT_07405 NC_017362.1 1462932 1463921 R COG0845 Membrane-fusion protein; secreted protein complement(1462932..1463921) Helicobacter pylori Lithuania75 12352554 YP_005773582.1 CDS HPLT_07410 NC_017362.1 1463932 1465464 R COG1538 Outer membrane protein; lipase-like protein complement(1463932..1465464) Helicobacter pylori Lithuania75 12352555 YP_005773583.1 CDS HPLT_07415 NC_017362.1 1465461 1466810 R COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein complement(1465461..1466810) Helicobacter pylori Lithuania75 12352556 YP_005773584.1 CDS HPLT_07420 NC_017362.1 1466918 1468519 R COG0306 Phosphate/sulphate permeases; phosphate permease complement(1466918..1468519) Helicobacter pylori Lithuania75 12352557 YP_005773585.1 CDS HPLT_07425 NC_017362.1 1468660 1468929 D COG0694 Thioredoxin-like proteins and domains; putative nifU-like protein 1468660..1468929 Helicobacter pylori Lithuania75 12352558 YP_005773586.1 CDS HPLT_07430 NC_017362.1 1468941 1469552 D hypothetical protein 1468941..1469552 Helicobacter pylori Lithuania75 12352559 YP_005773587.1 CDS murE NC_017362.1 1469556 1470899 D COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1469556..1470899 Helicobacter pylori Lithuania75 12352560 YP_005773588.1 CDS HPLT_07440 NC_017362.1 1470903 1471853 D COG0176 Transaldolase; transaldolase 1470903..1471853 Helicobacter pylori Lithuania75 12352561 YP_005773589.1 CDS HPLT_07445 NC_017362.1 1471908 1472444 D COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 1471908..1472444 Helicobacter pylori Lithuania75 12352562 YP_005773590.1 CDS HPLT_07450 NC_017362.1 1472454 1473014 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1472454..1473014 Helicobacter pylori Lithuania75 12352563 YP_005773591.1 CDS HPLT_07455 NC_017362.1 1473024 1474091 D COG0795 Predicted permeases; hypothetical protein 1473024..1474091 Helicobacter pylori Lithuania75 12352564 YP_005773592.1 CDS HPLT_07460 NC_017362.1 1474148 1475149 D COG3392 Adenine-specific DNA methylase; type II methylase 1474148..1475149 Helicobacter pylori Lithuania75 12352565 YP_005773593.1 CDS HPLT_07465 NC_017362.1 1475146 1476045 D COG0338 Site-specific DNA methylase; DNA adenine methylase 1475146..1476045 Helicobacter pylori Lithuania75 12352566 YP_005773594.1 CDS HPLT_07470 NC_017362.1 1476051 1477667 D putative endonuclease 1476051..1477667 Helicobacter pylori Lithuania75 12352567 YP_005773595.1 CDS HPLT_07475 NC_017362.1 1477715 1478881 R outer membrane protein (omp32) complement(1477715..1478881) Helicobacter pylori Lithuania75 12352568 YP_005773596.1 CDS HPLT_07480 NC_017362.1 1478847 1478954 R hypothetical protein complement(1478847..1478954) Helicobacter pylori Lithuania75 12352569 YP_005773597.1 CDS HPLT_07485 NC_017362.1 1479061 1479498 D COG3399 Uncharacterized protein conserved in bacteria; hypothetical protein 1479061..1479498 Helicobacter pylori Lithuania75 12352570 YP_005773598.1 CDS HPLT_07490 NC_017362.1 1479495 1481846 R COG2217 Cation transport ATPase; putative cation transporting P-type ATPase complement(1479495..1481846) Helicobacter pylori Lithuania75 12352571 YP_005773599.1 CDS HPLT_07495 NC_017362.1 1481873 1482589 R COG4123 Predicted O-methyltransferase; hypothetical protein complement(1481873..1482589) Helicobacter pylori Lithuania75 12352572 YP_005773600.1 CDS HPLT_07500 NC_017362.1 1482571 1483605 R COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein complement(1482571..1483605) Helicobacter pylori Lithuania75 12352573 YP_005773601.1 CDS HPLT_07505 NC_017362.1 1483602 1484828 R COG0786 Na+/glutamate symporter; glutamate permease complement(1483602..1484828) Helicobacter pylori Lithuania75 12352574 YP_005773602.1 CDS HPLT_07510 NC_017362.1 1484914 1486113 D COG1748 Saccharopine dehydrogenase and related proteins; hypothetical protein 1484914..1486113 Helicobacter pylori Lithuania75 12352575 YP_005773603.1 CDS HPLT_07515 NC_017362.1 1486122 1487498 R COG0348 Polyferredoxin; ferrodoxin-like protein complement(1486122..1487498) Helicobacter pylori Lithuania75 12352576 YP_005773604.1 CDS HPLT_07520 NC_017362.1 1487478 1488266 D COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1487478..1488266 Helicobacter pylori Lithuania75 12352577 YP_005773605.1 CDS HPLT_07525 NC_017362.1 1488263 1488616 D COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 1488263..1488616 Helicobacter pylori Lithuania75 12352578 YP_005773606.1 CDS HPLT_07530 NC_017362.1 1488600 1488794 D FrpB-like protein 1488600..1488794 Helicobacter pylori Lithuania75 12352579 YP_005773607.1 CDS HPLT_07535 NC_017362.1 1489078 1491711 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 1489078..1491711 Helicobacter pylori Lithuania75 12352580 YP_005773608.1 CDS HPLT_07540 NC_017362.1 1491938 1493110 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1491938..1493110 Helicobacter pylori Lithuania75 12352581 YP_005773609.1 CDS nusA NC_017362.1 1493212 1494399 D COG0195 Transcription elongation factor; transcription elongation factor NusA 1493212..1494399 Helicobacter pylori Lithuania75 12352582 YP_005773610.1 CDS HPLT_07550 NC_017362.1 1494456 1495139 D hypothetical protein 1494456..1495139 Helicobacter pylori Lithuania75 12352583 YP_005773611.1 CDS HPLT_07555 NC_017362.1 1495283 1495411 R hypothetical protein complement(1495283..1495411) Helicobacter pylori Lithuania75 12352584 YP_005773612.1 CDS HPLT_07560 NC_017362.1 1496183 1500097 R COG1002 Type II restriction enzyme, methylase subunits; type IIS R-M system restriction/modification enzyme complement(1496183..1500097) Helicobacter pylori Lithuania75 12352585 YP_005773613.1 CDS HPLT_07565 NC_017362.1 1500219 1503131 R COG3587 Restriction endonuclease; type III restriction enzyme R protein (res) complement(1500219..1503131) Helicobacter pylori Lithuania75 12352586 YP_005773614.1 CDS HPLT_07570 NC_017362.1 1503134 1503721 R COG2189 Adenine specific DNA methylase Mod; type III R-M system modification enzyme complement(1503134..1503721) Helicobacter pylori Lithuania75 12352587 YP_005773615.1 CDS HPLT_07575 NC_017362.1 1503718 1505037 R COG2189 Adenine specific DNA methylase Mod; type III DNA modification enzyme (methyltransferase) complement(1503718..1505037) Helicobacter pylori Lithuania75 12352588 YP_005773616.1 CDS HPLT_07580 NC_017362.1 1505080 1506951 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(1505080..1506951) Helicobacter pylori Lithuania75 12352589 YP_005773617.1 CDS HPLT_07585 NC_017362.1 1507033 1507386 D hypothetical protein 1507033..1507386 Helicobacter pylori Lithuania75 12352590 YP_005773618.1 CDS HPLT_07590 NC_017362.1 1507390 1508025 D hypothetical protein 1507390..1508025 Helicobacter pylori Lithuania75 12352591 YP_005773619.1 CDS HPLT_07595 NC_017362.1 1508022 1508774 R COG0708 Exonuclease III; exodeoxyribonuclease III complement(1508022..1508774) Helicobacter pylori Lithuania75 12352592 YP_005773620.1 CDS HPLT_07600 NC_017362.1 1508954 1510393 R hypothetical protein complement(1508954..1510393) Helicobacter pylori Lithuania75 12352594 YP_005773621.1 CDS dnaA NC_017362.1 1510614 1511981 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(1510614..1511981) Helicobacter pylori Lithuania75 12352595 YP_005773622.1 CDS HPLT_07610 NC_017362.1 1512134 1512676 D COG0813 Purine-nucleoside phosphorylase; purine nucleoside phosphorylase (punB) 1512134..1512676 Helicobacter pylori Lithuania75 12352596 YP_005773623.1 CDS HPLT_07615 NC_017362.1 1512719 1512958 D hypothetical protein 1512719..1512958 Helicobacter pylori Lithuania75 12352597 YP_005773624.1 CDS HPLT_07620 NC_017362.1 1512959 1514752 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 1512959..1514752 Helicobacter pylori Lithuania75 12352598 YP_005773625.1 CDS thyX NC_017362.1 1514775 1515401 D COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 1514775..1515401 Helicobacter pylori Lithuania75 12352599 YP_005773626.1 CDS HPLT_07630 NC_017362.1 1515521 1515613 D hypothetical protein 1515521..1515613 Helicobacter pylori Lithuania75 12352600 YP_005773627.1 CDS HPLT_07635 NC_017362.1 1515836 1515928 D hypothetical protein 1515836..1515928 Helicobacter pylori Lithuania75 12352601 YP_005773628.1 CDS HPLT_07640 NC_017362.1 1516029 1516139 R type I R-M system S protein complement(1516029..1516139) Helicobacter pylori Lithuania75 12352602 YP_005773629.1 CDS HPLT_07645 NC_017362.1 1516175 1516576 R COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme specificity protein complement(1516175..1516576) Helicobacter pylori Lithuania75 12352603 YP_005773630.1 CDS HPLT_07650 NC_017362.1 1517467 1519500 D COG3843 Type IV secretory pathway, VirD2 components (relaxase); relaxase 1517467..1519500 Helicobacter pylori Lithuania75 12352604 YP_005773631.1 CDS HPLT_07655 NC_017362.1 1520655 1521722 D COG0582 Integrase; integrase/recombinase (xerD) 1520655..1521722 Helicobacter pylori Lithuania75 12352605 YP_005773632.1 CDS HPLT_07660 NC_017362.1 1522039 1522842 R hypothetical protein complement(1522039..1522842) Helicobacter pylori Lithuania75 12352606 YP_005773633.1 CDS HPLT_07665 NC_017362.1 1522814 1523065 R hypothetical protein complement(1522814..1523065) Helicobacter pylori Lithuania75 12352607 YP_005773634.1 CDS HPLT_07675 NC_017362.1 1523849 1523941 D hypothetical protein 1523849..1523941 Helicobacter pylori Lithuania75 12352608 YP_005773635.1 CDS HPLT_07695 NC_017362.1 1525558 1526820 R type IV secretion system protein TrbL complement(1525558..1526820) Helicobacter pylori Lithuania75 12352609 YP_005773636.1 CDS HPLT_07720 NC_017362.1 1530136 1530453 R hypothetical protein complement(1530136..1530453) Helicobacter pylori Lithuania75 12352610 YP_005773637.1 CDS HPLT_07725 NC_017362.1 1530782 1530970 D hypothetical protein 1530782..1530970 Helicobacter pylori Lithuania75 12352611 YP_005773638.1 CDS HPLT_07730 NC_017362.1 1530984 1531745 R COG2963 Transposase and inactivated derivatives; hypothetical protein complement(1530984..1531745) Helicobacter pylori Lithuania75 12352612 YP_005773639.1 CDS HPLT_07735 NC_017362.1 1531732 1532610 R hypothetical protein complement(1531732..1532610) Helicobacter pylori Lithuania75 12352613 YP_005773640.1 CDS HPLT_07740 NC_017362.1 1532627 1533508 R hypothetical protein complement(1532627..1533508) Helicobacter pylori Lithuania75 12352614 YP_005773641.1 CDS HPLT_07745 NC_017362.1 1533563 1533889 R hypothetical protein complement(1533563..1533889) Helicobacter pylori Lithuania75 12352615 YP_005773642.1 CDS HPLT_07750 NC_017362.1 1533893 1534204 R hypothetical protein complement(1533893..1534204) Helicobacter pylori Lithuania75 12352616 YP_005773643.1 CDS HPLT_07765 NC_017362.1 1535202 1535366 R hypothetical protein complement(1535202..1535366) Helicobacter pylori Lithuania75 12352617 YP_005773644.1 CDS HPLT_07770 NC_017362.1 1536003 1536671 D COG1192 ATPases involved in chromosome partitioning; hypothetical protein 1536003..1536671 Helicobacter pylori Lithuania75 12352618 YP_005773645.1 CDS HPLT_07775 NC_017362.1 1536718 1537095 D hypothetical protein 1536718..1537095 Helicobacter pylori Lithuania75 12352619 YP_005773646.1 CDS HPLT_07780 NC_017362.1 1537073 1537720 D hypothetical protein 1537073..1537720 Helicobacter pylori Lithuania75 12352620 YP_005773647.1 CDS HPLT_07785 NC_017362.1 1537860 1538588 R hypothetical protein complement(1537860..1538588) Helicobacter pylori Lithuania75 12352621 YP_005773648.1 CDS HPLT_07790 NC_017362.1 1538585 1539055 R hypothetical protein complement(1538585..1539055) Helicobacter pylori Lithuania75 12352622 YP_005773649.1 CDS HPLT_07795 NC_017362.1 1539110 1541170 R COG0550 Topoisomerase IA; DNA topoisomerase I complement(1539110..1541170) Helicobacter pylori Lithuania75 12352623 YP_005773650.1 CDS HPLT_07800 NC_017362.1 1541183 1541584 R hypothetical protein complement(1541183..1541584) Helicobacter pylori Lithuania75 12352624 YP_005773651.1 CDS HPLT_07805 NC_017362.1 1541635 1541886 R hypothetical protein complement(1541635..1541886) Helicobacter pylori Lithuania75 12352625 YP_005773652.1 CDS HPLT_07810 NC_017362.1 1541966 1542091 R hypothetical protein complement(1541966..1542091) Helicobacter pylori Lithuania75 12352626 YP_005773653.1 CDS HPLT_07815 NC_017362.1 1542212 1550812 R COG0827 Adenine-specific DNA methylase; adenine specific DNA methyltransferase complement(1542212..1550812) Helicobacter pylori Lithuania75 12352627 YP_005773654.1 CDS HPLT_07820 NC_017362.1 1550832 1551353 R COG0747 ABC-type dipeptide transport system, periplasmic component; VirD4 coupling protein complement(1550832..1551353) Helicobacter pylori Lithuania75 12352628 YP_005773655.1 CDS HPLT_07825 NC_017362.1 1551396 1553102 D COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; typeI restriction enzyme R protein 1551396..1553102 Helicobacter pylori Lithuania75 12352629 YP_005773656.1 CDS HPLT_07830 NC_017362.1 1553102 1553809 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 1553102..1553809 Helicobacter pylori Lithuania75 12352630 YP_005773657.1 CDS HPLT_07845 NC_017362.1 1556774 1557742 R COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; arginase complement(1556774..1557742) Helicobacter pylori Lithuania75 12352631 YP_005773658.1 CDS HPLT_07850 NC_017362.1 1557946 1559088 D COG0686 Alanine dehydrogenase; alanine dehydrogenase 1557946..1559088 Helicobacter pylori Lithuania75 12352632 YP_005773659.1 CDS HPLT_07855 NC_017362.1 1559206 1560972 D COG1479 Uncharacterized conserved protein; hypothetical protein 1559206..1560972 Helicobacter pylori Lithuania75 12352633 YP_005773660.1 CDS HPLT_07860 NC_017362.1 1560983 1561711 R hypothetical protein complement(1560983..1561711) Helicobacter pylori Lithuania75 12352634 YP_005773661.1 CDS HPLT_07865 NC_017362.1 1561897 1562751 D COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 1561897..1562751 Helicobacter pylori Lithuania75 12352635 YP_005773662.1 CDS HPLT_07870 NC_017362.1 1562773 1564347 D COG0497 ATPase involved in DNA repair; DNA repair protein RecN 1562773..1564347 Helicobacter pylori Lithuania75 12352636 YP_005773663.1 CDS HPLT_07875 NC_017362.1 1564344 1565651 D COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; fibronectin/fibrinogen-binding protein 1564344..1565651 Helicobacter pylori Lithuania75 12352637 YP_005773664.1 CDS HPLT_07880 NC_017362.1 1565670 1565966 D hypothetical protein 1565670..1565966 Helicobacter pylori Lithuania75 12352638 YP_005773665.1 CDS HPLT_07885 NC_017362.1 1566070 1566306 D hypothetical protein 1566070..1566306 Helicobacter pylori Lithuania75 12352639 YP_005773666.1 CDS HPLT_07890 NC_017362.1 1566296 1566883 D hypothetical protein 1566296..1566883 Helicobacter pylori Lithuania75 12352640 YP_005773667.1 CDS HPLT_07895 NC_017362.1 1566899 1567465 D COG0270 Site-specific DNA methylase; site-specific DNA-methyltransferase 1566899..1567465 Helicobacter pylori Lithuania75 12352641 YP_005773668.1 CDS HPLT_07900 NC_017362.1 1567566 1567769 R hypothetical protein complement(1567566..1567769) Helicobacter pylori Lithuania75 12352642 YP_005773669.1 CDS HPLT_07905 NC_017362.1 1567769 1568641 R COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase complement(1567769..1568641) Helicobacter pylori Lithuania75 12352643 YP_005773670.1 CDS HPLT_07910 NC_017362.1 1568712 1569365 D COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 1568712..1569365 Helicobacter pylori Lithuania75 12352644 YP_005773671.1 CDS HPLT_07915 NC_017362.1 1569343 1570206 D COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon 1569343..1570206 Helicobacter pylori Lithuania75 12352645 YP_005773672.1 CDS HPLT_07920 NC_017362.1 1570421 1571131 R hypothetical protein complement(1570421..1571131) Helicobacter pylori Lithuania75 12352646 YP_005773673.1 CDS tsf NC_017362.1 1571192 1572259 R COG0264 Translation elongation factor Ts; elongation factor Ts complement(1571192..1572259) Helicobacter pylori Lithuania75 12352647 YP_005773674.1 CDS rpsB NC_017362.1 1572259 1573053 R COG0052 Ribosomal protein S2; 30S ribosomal protein S2 complement(1572259..1573053) Helicobacter pylori Lithuania75 12352648 YP_005773675.1 CDS HPLT_07935 NC_017362.1 1573303 1576158 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); putative recombination protein RecB 1573303..1576158 Helicobacter pylori Lithuania75 12352649 YP_005773676.1 CDS HPLT_07940 NC_017362.1 1576182 1577498 D COG3004 Na+/H+ antiporter; Na(+)/H(+) antiporter NhaA 1576182..1577498 Helicobacter pylori Lithuania75 12352650 YP_005773677.1 CDS yajC NC_017362.1 1577546 1577929 D COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 1577546..1577929 Helicobacter pylori Lithuania75 12352651 YP_005773678.1 CDS secD NC_017362.1 1577926 1579506 D COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 1577926..1579506 Helicobacter pylori Lithuania75 12352652 YP_005773679.1 CDS secF NC_017362.1 1579515 1580486 D COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 1579515..1580486 Helicobacter pylori Lithuania75 12352653 YP_005773680.1 CDS HPLT_07960 NC_017362.1 1580496 1580834 D hypothetical protein 1580496..1580834 Helicobacter pylori Lithuania75 12352654 YP_005773681.1 CDS leuS NC_017362.1 1580844 1583264 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 1580844..1583264 Helicobacter pylori Lithuania75 12352655 YP_005773682.1 CDS HPLT_07970 NC_017362.1 1583261 1583773 D hypothetical protein 1583261..1583773 Helicobacter pylori Lithuania75 12352656 YP_005773683.1 CDS HPLT_07975 NC_017362.1 1583763 1584938 D COG0285 Folylpolyglutamate synthase; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 1583763..1584938 Helicobacter pylori Lithuania75 12352657 YP_005773684.1 CDS HPLT_07980 NC_017362.1 1584938 1585864 D COG0739 Membrane proteins related to metalloendopeptidases; toxR-activated protein (tagE) 1584938..1585864 Helicobacter pylori Lithuania75 12352658 YP_005773685.1 CDS HPLT_07985 NC_017362.1 1585873 1586811 D COG0739 Membrane proteins related to metalloendopeptidases; toxR-activated protein 1585873..1586811 Helicobacter pylori Lithuania75 12352659 YP_005773686.1 CDS HPLT_07990 NC_017362.1 1586730 1587140 D COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 1586730..1587140 Helicobacter pylori Lithuania75 12352660 YP_005773687.1 CDS HPLT_07995 NC_017362.1 1587144 1590143 D COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor (trcF) 1587144..1590143 Helicobacter pylori Lithuania75 12352661 YP_005773688.1 CDS HPLT_08000 NC_017362.1 1590267 1590770 D COG0723 Rieske Fe-S protein; ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit (fbcF) 1590267..1590770 Helicobacter pylori Lithuania75 12352662 YP_005773689.1 CDS HPLT_08005 NC_017362.1 1590781 1592019 D COG1290 Cytochrome b subunit of the bc complex; ubiquinol cytochrome c oxidoreductase, cytochrome b subunit (fbcH) 1590781..1592019 Helicobacter pylori Lithuania75 12352663 YP_005773690.1 CDS HPLT_08010 NC_017362.1 1592016 1592873 D COG2010 Cytochrome c, mono- and diheme variants; Ubiquinol cytochrome c oxidoreductase, cytochrome c subunit 1592016..1592873 Helicobacter pylori Lithuania75 12352664 YP_005773691.1 CDS HPLT_08015 NC_017362.1 1592968 1593078 D hypothetical protein 1592968..1593078 Helicobacter pylori Lithuania75 12352665 YP_005773692.1 CDS HPLT_08020 NC_017362.1 1593203 1593733 R hypothetical protein complement(1593203..1593733) Helicobacter pylori Lithuania75 12352666 YP_005773693.1 CDS HPLT_08035 NC_017362.1 1594914 1596761 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; cell division protein complement(1594914..1596761) Helicobacter pylori Lithuania75 12352667 YP_005773694.1 CDS fliE NC_017362.1 1596917 1597246 R COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE complement(1596917..1597246) Helicobacter pylori Lithuania75 12352668 YP_005773695.1 CDS flgC NC_017362.1 1597374 1597859 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(1597374..1597859) Helicobacter pylori Lithuania75 12352669 YP_005773696.1 CDS flgB NC_017362.1 1597872 1598294 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(1597872..1598294) Helicobacter pylori Lithuania75 12352670 YP_005773697.1 CDS HPLT_08055 NC_017362.1 1598500 1599666 D COG0772 Bacterial cell division membrane protein; cell division protein ftsW 1598500..1599666 Helicobacter pylori Lithuania75 12352671 YP_005773698.1 CDS HPLT_08060 NC_017362.1 1599697 1600698 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron(III) ABC transporter, periplasmic iron-binding protein (ceuE) complement(1599697..1600698) Helicobacter pylori Lithuania75 12352672 YP_005773699.1 CDS HPLT_08065 NC_017362.1 1600897 1601898 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; iron complex transport system substrate-binding protein complement(1600897..1601898) Helicobacter pylori Lithuania75 12352673 YP_005773700.1 CDS HPLT_08070 NC_017362.1 1602139 1602735 D COG0450 Peroxiredoxin; Alkyl hydroperoxide reductase 1602139..1602735 Helicobacter pylori Lithuania75 12352674 YP_005773701.1 CDS HPLT_08075 NC_017362.1 1602882 1603697 D COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; outer membrane protein 1602882..1603697 Helicobacter pylori Lithuania75 12352675 YP_005773702.1 CDS HPLT_08080 NC_017362.1 1603769 1603909 D hypothetical protein 1603769..1603909 Helicobacter pylori Lithuania75 12352676 YP_005773703.1 CDS HPLT_08085 NC_017362.1 1604187 1605953 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(1604187..1605953) Helicobacter pylori Lithuania75 12352677 YP_005773704.1 CDS HPLT_08090 NC_017362.1 1605934 1606377 R hypothetical protein complement(1605934..1606377) Helicobacter pylori Lithuania75 12352678 YP_005773705.1 CDS engB NC_017362.1 1606390 1607016 R COG0218 Predicted GTPase; ribosome biogenesis GTP-binding protein YsxC complement(1606390..1607016) Helicobacter pylori Lithuania75 12352679 YP_005773706.1 CDS HPLT_08100 NC_017362.1 1607013 1607570 R COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1607013..1607570) Helicobacter pylori Lithuania75 12352680 YP_005773707.1 CDS HPLT_08105 NC_017362.1 1607570 1608163 R hypothetical protein complement(1607570..1608163) Helicobacter pylori Lithuania75 12352681 YP_005773708.1 CDS HPLT_08110 NC_017362.1 1608138 1608632 R COG1778 Low specificity phosphatase (HAD superfamily); hypothetical protein complement(1608138..1608632) Helicobacter pylori Lithuania75 12352682 YP_005773709.1 CDS HPLT_08115 NC_017362.1 1608629 1609573 R COG0797 Lipoproteins; rare lipoprotein A complement(1608629..1609573) Helicobacter pylori Lithuania75 12352683 YP_005773710.1 CDS HPLT_08120 NC_017362.1 1609573 1610664 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); membrane-bound lytic murein transglycosylase D complement(1609573..1610664) Helicobacter pylori Lithuania75 12352684 YP_005773711.1 CDS HPLT_08125 NC_017362.1 1610775 1611539 R COG0084 Mg-dependent DNase; hypothetical protein complement(1610775..1611539) Helicobacter pylori Lithuania75 12352685 YP_005773712.1 CDS HPLT_08130 NC_017362.1 1611614 1612234 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1611614..1612234 Helicobacter pylori Lithuania75 12352686 YP_005773713.1 CDS HPLT_08135 NC_017362.1 1612235 1612507 D COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; hypothetical protein 1612235..1612507 Helicobacter pylori Lithuania75 12352687 YP_005773714.1 CDS HPLT_08140 NC_017362.1 1612529 1613512 D COG1135 ABC-type metal ion transport system, ATPase component; D-methionine transport system ATP-binding protein 1612529..1613512 Helicobacter pylori Lithuania75 12352688 YP_005773715.1 CDS HPLT_08145 NC_017362.1 1613514 1614161 D COG2011 ABC-type metal ion transport system, permease component; D-methionine transport system permease 1613514..1614161 Helicobacter pylori Lithuania75 12352689 YP_005773716.1 CDS HPLT_08150 NC_017362.1 1614193 1615311 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1614193..1615311) Helicobacter pylori Lithuania75 12352690 YP_005773717.1 CDS HPLT_08155 NC_017362.1 1615360 1615788 R hypothetical protein complement(1615360..1615788) Helicobacter pylori Lithuania75 12352691 YP_005773718.1 CDS HPLT_08160 NC_017362.1 1615798 1616394 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(1615798..1616394) Helicobacter pylori Lithuania75 12352692 YP_005773719.1 CDS HPLT_08165 NC_017362.1 1616391 1617401 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; undecaprenyl phosphate N-acetylglucosaminyltransferase complement(1616391..1617401) Helicobacter pylori Lithuania75 12352693 YP_005773720.1 CDS HPLT_08170 NC_017362.1 1617541 1618329 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 1617541..1618329 Helicobacter pylori Lithuania75 12352039 YP_005773721.1 CDS pdxA NC_017362.1 1618331 1619263 D COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 1618331..1619263 Helicobacter pylori Lithuania75 12352040 YP_005773722.1 CDS HPLT_08180 NC_017362.1 1619319 1620341 D COG0533 Metal-dependent proteases with possible chaperone activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1619319..1620341 Helicobacter pylori Lithuania75 12352041 YP_005773723.1 CDS flgG NC_017362.1 1621212 1622000 D COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 1621212..1622000 Helicobacter pylori Lithuania75 12352042 YP_005773724.1 CDS HPLT_08190 NC_017362.1 1622047 1622208 D hypothetical protein 1622047..1622208 Helicobacter pylori Lithuania75 12352043 YP_005773725.1 CDS HPLT_08205 NC_017362.1 1623367 1623507 R hypothetical protein complement(1623367..1623507) Helicobacter pylori Lithuania75 12352044 YP_005773726.1 CDS HPLT_08210 NC_017362.1 1623591 1624352 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1623591..1624352) Helicobacter pylori Lithuania75 12352045 YP_005773727.1 CDS HPLT_08299 NC_017363.1 310 1905 D COG5527 Protein involved in initiation of plasmid replication; replication initiation protein A 310..1905 Helicobacter pylori Lithuania75 12228660 YP_005773728.1 CDS HPLT_08304 NC_017363.1 1918 2451 D COG3177 Uncharacterized conserved protein; hypothetical protein 1918..2451 Helicobacter pylori Lithuania75 12228661 YP_005773729.1 CDS HPLT_08309 NC_017363.1 2884 3138 R integrase/recombinase XercD family protein complement(2884..3138) Helicobacter pylori Lithuania75 12228662 YP_005773730.1 CDS HPLT_08314 NC_017363.1 3586 4365 D hypothetical protein 3586..4365 Helicobacter pylori Lithuania75 12228663 YP_005773731.1 CDS HPLT_08319 NC_017363.1 4385 4675 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein 4385..4675 Helicobacter pylori Lithuania75 12228664 YP_005773732.1 CDS HPLT_08324 NC_017363.1 4702 5304 D hypothetical protein 4702..5304 Helicobacter pylori Lithuania75 12228665 YP_005773733.1 CDS HPLT_08329 NC_017363.1 5240 5935 D adenine specific DNA methyltransferase 5240..5935 Helicobacter pylori Lithuania75 12228666 YP_005773734.1 CDS HPLT_08334 NC_017363.1 6201 6857 D COG1192 ATPases involved in chromosome partitioning; putative chromosome partitioning protein 6201..6857 Helicobacter pylori Lithuania75 12228667 YP_005773735.1 CDS HPLT_08339 NC_017363.1 6939 7223 D hypothetical protein 6939..7223 Helicobacter pylori Lithuania75 12228668 YP_005773736.1 CDS HPLT_08344 NC_017363.1 7250 9193 R COG3843 Type IV secretory pathway, VirD2 components (relaxase); hypothetical protein complement(7250..9193) Helicobacter pylori Lithuania75 12228669 YP_005773737.1 CDS HPLT_08349 NC_017363.1 9185 9538 D hypothetical protein 9185..9538 Helicobacter pylori Lithuania75 12228651 YP_005773738.1 CDS HPLT_08354 NC_017363.1 9573 9869 D hypothetical protein 9573..9869 Helicobacter pylori Lithuania75 12228652 YP_005773739.1 CDS HPLT_08359 NC_017363.1 10071 12278 R COG3505 Type IV secretory pathway, VirD4 components; conjugal transfer protein (traG) complement(10071..12278) Helicobacter pylori Lithuania75 12228653 YP_005773740.1 CDS HPLT_08364 NC_017363.1 12271 12981 R COG2948 Type IV secretory pathway, VirB10 components; competence protein complement(12271..12981) Helicobacter pylori Lithuania75 12228654 YP_005773741.1 CDS HPLT_08369 NC_017363.1 13301 14224 R MobA-like protein complement(13301..14224) Helicobacter pylori Lithuania75 12228655 YP_005773742.1 CDS HPLT_08374 NC_017363.1 14214 14549 R hypothetical protein complement(14214..14549) Helicobacter pylori Lithuania75 12228656 YP_005773743.1 CDS HPLT_08379 NC_017363.1 14720 15001 D hypothetical protein 14720..15001 Helicobacter pylori Lithuania75 12228657 YP_005773744.1 CDS HPLT_08384 NC_017363.1 15010 15279 D COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 15010..15279 Helicobacter pylori Lithuania75 12228658 YP_005773745.1 CDS HPLT_08389 NC_017363.1 15385 15543 D hypothetical protein 15385..15543 Helicobacter pylori Lithuania75 12228659 HPLT_t08217 tRNA HPLT_t08217 NC_017362.1 4041 4116 R tRNA-Glu complement(4041..4116) Helicobacter pylori Lithuania75 12352472 HPLT_t08219 tRNA HPLT_t08219 NC_017362.1 4179 4255 R tRNA-Asp complement(4179..4255) Helicobacter pylori Lithuania75 12352474 HPLT_t08221 tRNA HPLT_t08221 NC_017362.1 4296 4371 R tRNA-Val complement(4296..4371) Helicobacter pylori Lithuania75 12352509 HPLT_t08223 tRNA HPLT_t08223 NC_017362.1 4413 4487 R tRNA-Glu complement(4413..4487) Helicobacter pylori Lithuania75 12351430 HPLT_t08225 tRNA HPLT_t08225 NC_017362.1 4498 4573 R tRNA-Lys complement(4498..4573) Helicobacter pylori Lithuania75 12351431 HPLT_t08227 tRNA HPLT_t08227 NC_017362.1 72203 72278 R tRNA-Val complement(72203..72278) Helicobacter pylori Lithuania75 12351567 HPLT_t08229 tRNA HPLT_t08229 NC_017362.1 89533 89624 D tRNA-Ser 89533..89624 Helicobacter pylori Lithuania75 12351586 HPLT_t08231 tRNA HPLT_t08231 NC_017362.1 229990 230064 R tRNA-Asn complement(229990..230064) Helicobacter pylori Lithuania75 12351886 HPLT_t08233 tRNA HPLT_t08233 NC_017362.1 253042 253117 R tRNA-Ala complement(253042..253117) Helicobacter pylori Lithuania75 12351910 HPLT_t08235 tRNA HPLT_t08235 NC_017362.1 333539 333615 D tRNA-Arg 333539..333615 Helicobacter pylori Lithuania75 12351134 HPLT_t08237 tRNA HPLT_t08237 NC_017362.1 385764 385851 R tRNA-Ser complement(385764..385851) Helicobacter pylori Lithuania75 12351185 HPLT_t08239 tRNA HPLT_t08239 NC_017362.1 438760 438837 R tRNA-Pro complement(438760..438837) Helicobacter pylori Lithuania75 12351242 HPLT_t08241 tRNA HPLT_t08241 NC_017362.1 753470 753546 R tRNA-Met complement(753470..753546) Helicobacter pylori Lithuania75 12351643 HPLT_t08243 tRNA HPLT_t08243 NC_017362.1 843752 843828 D tRNA-Arg 843752..843828 Helicobacter pylori Lithuania75 12351818 HPLT_t08245 tRNA HPLT_t08245 NC_017362.1 903911 903987 R tRNA-Met complement(903911..903987) Helicobacter pylori Lithuania75 12351876 HPLT_t08247 tRNA HPLT_t08247 NC_017362.1 904006 904080 R tRNA-Gln complement(904006..904080) Helicobacter pylori Lithuania75 12351958 HPLT_t08249 tRNA HPLT_t08249 NC_017362.1 958706 958780 D tRNA-Gly 958706..958780 Helicobacter pylori Lithuania75 12352010 HPLT_t08251 tRNA HPLT_t08251 NC_017362.1 959176 959262 D tRNA-Leu 959176..959262 Helicobacter pylori Lithuania75 12352012 HPLT_t08253 tRNA HPLT_t08253 NC_017362.1 959336 959410 D tRNA-Cys 959336..959410 Helicobacter pylori Lithuania75 12352013 HPLT_t08255 tRNA HPLT_t08255 NC_017362.1 959458 959545 D tRNA-Ser 959458..959545 Helicobacter pylori Lithuania75 12352014 HPLT_t08257 tRNA HPLT_t08257 NC_017362.1 1028651 1028727 R tRNA-Arg complement(1028651..1028727) Helicobacter pylori Lithuania75 12352083 HPLT_t08259 tRNA HPLT_t08259 NC_017362.1 1028745 1028821 R tRNA-Arg complement(1028745..1028821) Helicobacter pylori Lithuania75 12352084 HPLT_t08261 tRNA HPLT_t08261 NC_017362.1 1028882 1028958 R tRNA-His complement(1028882..1028958) Helicobacter pylori Lithuania75 12352085 HPLT_t08263 tRNA HPLT_t08263 NC_017362.1 1029026 1029103 R tRNA-Pro complement(1029026..1029103) Helicobacter pylori Lithuania75 12352086 HPLT_t08265 tRNA HPLT_t08265 NC_017362.1 1079090 1079174 R tRNA-Leu complement(1079090..1079174) Helicobacter pylori Lithuania75 12352134 HPLT_t08267 tRNA HPLT_t08267 NC_017362.1 1083957 1084033 D tRNA-Ile 1083957..1084033 Helicobacter pylori Lithuania75 12352140 HPLT_t08269 tRNA HPLT_t08269 NC_017362.1 1084049 1084124 D tRNA-Ala 1084049..1084124 Helicobacter pylori Lithuania75 12352141 HPLT_t08271 tRNA HPLT_t08271 NC_017362.1 1179021 1179098 R tRNA-Met complement(1179021..1179098) Helicobacter pylori Lithuania75 12352238 HPLT_t08273 tRNA HPLT_t08273 NC_017362.1 1207615 1207690 R tRNA-Trp complement(1207615..1207690) Helicobacter pylori Lithuania75 12352263 HPLT_t08275 tRNA HPLT_t08275 NC_017362.1 1209248 1209322 R tRNA-Thr complement(1209248..1209322) Helicobacter pylori Lithuania75 12352266 HPLT_t08277 tRNA HPLT_t08277 NC_017362.1 1209352 1209428 R tRNA-Gly complement(1209352..1209428) Helicobacter pylori Lithuania75 12352267 HPLT_t08279 tRNA HPLT_t08279 NC_017362.1 1209444 1209528 R tRNA-Tyr complement(1209444..1209528) Helicobacter pylori Lithuania75 12352268 HPLT_t08281 tRNA HPLT_t08281 NC_017362.1 1209556 1209631 R tRNA-Thr complement(1209556..1209631) Helicobacter pylori Lithuania75 12352269 HPLT_t08283 tRNA HPLT_t08283 NC_017362.1 1214965 1215051 R tRNA-Leu complement(1214965..1215051) Helicobacter pylori Lithuania75 12352276 HPLT_t08285 tRNA HPLT_t08285 NC_017362.1 1215105 1215191 R tRNA-Leu complement(1215105..1215191) Helicobacter pylori Lithuania75 12352278 HPLT_t08287 tRNA HPLT_t08287 NC_017362.1 1508876 1508951 D tRNA-Phe 1508876..1508951 Helicobacter pylori Lithuania75 12352593 HPLT_r08289 rRNA HPLT_r08289 NC_017362.1 1007220 1007337 R 5S ribosomal RNA complement(1007220..1007337) Helicobacter pylori Lithuania75 12352066 HPLT_r08297 rRNA HPLT_r08297 NC_017362.1 1007578 1010452 R 23S ribosomal RNA complement(1007578..1010452) Helicobacter pylori Lithuania75 12352067 HPLT_r08293 rRNA HPLT_r08293 NC_017362.1 1136450 1137957 R 16S ribosomal RNA complement(1136450..1137957) Helicobacter pylori Lithuania75 12352197 HPLT_r08291 rRNA HPLT_r08291 NC_017362.1 1379610 1379727 R 5S ribosomal RNA complement(1379610..1379727) Helicobacter pylori Lithuania75 12352463 HPLT_r08299 rRNA HPLT_r08299 NC_017362.1 1379968 1382842 R 23S ribosomal RNA complement(1379968..1382842) Helicobacter pylori Lithuania75 12352464 HPLT_r08295 rRNA HPLT_r08295 NC_017362.1 1413593 1415100 R 16S ribosomal RNA complement(1413593..1415100) Helicobacter pylori Lithuania75 12352500