-- dump date 20140619_113352 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 907240000001 SEQ_END SEQ_END NC_017364.1 2557 2557 DR NC_017364.1; contig end 2557..2557 Helicobacter pylori Gambia94/24 907240000002 SEQ_END SEQ_END NC_017371.1 1709911 1709911 DR NC_017371.1; contig end 1709911..1709911 Helicobacter pylori Gambia94/24 YP_005773746.1 CDS HPGAM_08589 NC_017364.1 91 1701 D hypothetical protein 91..1701 Helicobacter pylori Gambia94/24 12228671 YP_005779742.1 CDS nusB NC_017371.1 11 427 R COG0781 Transcription termination factor; transcription antitermination protein NusB complement(11..427) Helicobacter pylori Gambia94/24 12361017 YP_005779743.1 CDS ribH NC_017371.1 429 899 R COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase complement(429..899) Helicobacter pylori Gambia94/24 12361019 YP_005779744.1 CDS HPGAM_00015 NC_017371.1 909 1739 R COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase complement(909..1739) Helicobacter pylori Gambia94/24 12361021 YP_005779745.1 CDS HPGAM_00020 NC_017371.1 1743 2390 R COG0288 Carbonic anhydrase; carbonic anhydrase complement(1743..2390) Helicobacter pylori Gambia94/24 12361023 YP_005779746.1 CDS HPGAM_00025 NC_017371.1 2513 3196 D COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 2513..3196 Helicobacter pylori Gambia94/24 12361030 YP_005779747.1 CDS panC NC_017371.1 3196 4026 D COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 3196..4026 Helicobacter pylori Gambia94/24 12361032 YP_005779748.1 CDS HPGAM_00035 NC_017371.1 5115 5276 R hypothetical protein complement(5115..5276) Helicobacter pylori Gambia94/24 12359817 YP_005779749.1 CDS HPGAM_00040 NC_017371.1 5487 7499 R putative Outer membrane protein complement(5487..7499) Helicobacter pylori Gambia94/24 12359818 YP_005779750.1 CDS HPGAM_00045 NC_017371.1 7677 7826 R hypothetical protein complement(7677..7826) Helicobacter pylori Gambia94/24 12359819 YP_005779751.1 CDS groEL NC_017371.1 7833 9473 R COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL complement(7833..9473) Helicobacter pylori Gambia94/24 12359820 YP_005779752.1 CDS groES NC_017371.1 9500 9856 R COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES complement(9500..9856) Helicobacter pylori Gambia94/24 12359821 YP_005779753.1 CDS dnaG NC_017371.1 10133 11812 D COG0358 DNA primase (bacterial type); DNA primase 10133..11812 Helicobacter pylori Gambia94/24 12359822 YP_005779754.1 CDS HPGAM_00065 NC_017371.1 11809 12861 D COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; hypothetical protein 11809..12861 Helicobacter pylori Gambia94/24 12359823 YP_005779755.1 CDS HPGAM_00070 NC_017371.1 12954 13781 D hypothetical protein 12954..13781 Helicobacter pylori Gambia94/24 12359824 YP_005779756.1 CDS HPGAM_00075 NC_017371.1 13926 14207 D hypothetical protein 13926..14207 Helicobacter pylori Gambia94/24 12359825 YP_005779757.1 CDS HPGAM_00080 NC_017371.1 14207 14470 D hypothetical protein 14207..14470 Helicobacter pylori Gambia94/24 12359826 YP_005779758.1 CDS HPGAM_00085 NC_017371.1 14472 16835 D COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein 14472..16835 Helicobacter pylori Gambia94/24 12359827 YP_005779759.1 CDS HPGAM_00090 NC_017371.1 17140 18480 D COG3014 Uncharacterized protein conserved in bacteria; hypothetical protein 17140..18480 Helicobacter pylori Gambia94/24 12359828 YP_005779760.1 CDS HPGAM_00095 NC_017371.1 18586 19551 D COG0835 Chemotaxis signal transduction protein; chemotaxis protein (cheV) 18586..19551 Helicobacter pylori Gambia94/24 12359829 YP_005779761.1 CDS HPGAM_00100 NC_017371.1 19548 20765 D COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 19548..20765 Helicobacter pylori Gambia94/24 12359830 YP_005779762.1 CDS HPGAM_00105 NC_017371.1 20804 21376 R COG0671 Membrane-associated phospholipid phosphatase; lipid A 1-phosphatase complement(20804..21376) Helicobacter pylori Gambia94/24 12359831 YP_005779763.1 CDS HPGAM_00110 NC_017371.1 21387 22958 R COG2194 Predicted membrane-associated, metal-dependent hydrolase; lipid A phosphoethanolamine transferase complement(21387..22958) Helicobacter pylori Gambia94/24 12359832 YP_005779764.1 CDS HPGAM_00115 NC_017371.1 23572 25647 R outer membrane protein HopD complement(23572..25647) Helicobacter pylori Gambia94/24 12359833 YP_005779765.1 CDS HPGAM_00120 NC_017371.1 25921 26118 D hypothetical protein 25921..26118 Helicobacter pylori Gambia94/24 12359834 YP_005779766.1 CDS gltA NC_017371.1 26220 27500 R COG0372 Citrate synthase; type II citrate synthase complement(26220..27500) Helicobacter pylori Gambia94/24 12359835 YP_005779767.1 CDS HPGAM_00130 NC_017371.1 27701 28978 D COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 27701..28978 Helicobacter pylori Gambia94/24 12359836 YP_005779768.1 CDS HPGAM_00135 NC_017371.1 29043 29570 D hypothetical protein 29043..29570 Helicobacter pylori Gambia94/24 12359837 YP_005779769.1 CDS HPGAM_00140 NC_017371.1 29547 30203 R COG0132 Dethiobiotin synthetase; dethiobiotin synthetase complement(29547..30203) Helicobacter pylori Gambia94/24 12359838 YP_005779770.1 CDS HPGAM_00145 NC_017371.1 30207 32000 R hypothetical protein complement(30207..32000) Helicobacter pylori Gambia94/24 12359839 YP_005779771.1 CDS HPGAM_00150 NC_017371.1 32111 32524 D COG0589 Universal stress protein UspA and related nucleotide-binding proteins; putative universal stress global response regulator UspA 32111..32524 Helicobacter pylori Gambia94/24 12359840 YP_005779772.1 CDS HPGAM_00155 NC_017371.1 32526 32801 D COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adapter protein ClpS 32526..32801 Helicobacter pylori Gambia94/24 12359841 YP_005779773.1 CDS HPGAM_00160 NC_017371.1 32801 35029 D COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease,ATP-binding subunit 32801..35029 Helicobacter pylori Gambia94/24 12359842 YP_005779774.1 CDS HPGAM_00165 NC_017371.1 35019 35372 D COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 35019..35372 Helicobacter pylori Gambia94/24 12359843 YP_005779775.1 CDS HPGAM_00170 NC_017371.1 35375 35677 D COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 35375..35677 Helicobacter pylori Gambia94/24 12359844 YP_005779776.1 CDS HPGAM_00175 NC_017371.1 35677 36681 D hypothetical protein 35677..36681 Helicobacter pylori Gambia94/24 12359845 YP_005779777.1 CDS HPGAM_00180 NC_017371.1 36689 37744 D hypothetical protein 36689..37744 Helicobacter pylori Gambia94/24 12359846 YP_005779778.1 CDS HPGAM_00185 NC_017371.1 37760 37873 D Comb7 competence protein 37760..37873 Helicobacter pylori Gambia94/24 12359847 YP_005779779.1 CDS HPGAM_00190 NC_017371.1 37870 38613 D COG3736 Type IV secretory pathway, component VirB8; type IV secretion system protein VirB8 37870..38613 Helicobacter pylori Gambia94/24 12359848 YP_005779780.1 CDS HPGAM_00195 NC_017371.1 38613 39599 D COG3504 Type IV secretory pathway, VirB9 components; DNA transformation compentancy 38613..39599 Helicobacter pylori Gambia94/24 12359849 YP_005779781.1 CDS HPGAM_00200 NC_017371.1 39592 40722 D COG2948 Type IV secretory pathway, VirB10 components; DNA transformation compentancy 39592..40722 Helicobacter pylori Gambia94/24 12359850 YP_005779782.1 CDS HPGAM_00205 NC_017371.1 40792 42204 D COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 40792..42204 Helicobacter pylori Gambia94/24 12359851 YP_005779783.1 CDS HPGAM_00210 NC_017371.1 42249 43394 D COG1089 GDP-D-mannose dehydratase; GDP-D-mannose dehydratase 42249..43394 Helicobacter pylori Gambia94/24 12359852 YP_005779784.1 CDS HPGAM_00215 NC_017371.1 43387 44319 D COG0451 Nucleoside-diphosphate-sugar epimerases; putative sugar nucleotide biosynthesis 43387..44319 Helicobacter pylori Gambia94/24 12359853 YP_005779785.1 CDS HPGAM_00220 NC_017371.1 44623 44727 R hypothetical protein complement(44623..44727) Helicobacter pylori Gambia94/24 12359854 YP_005779786.1 CDS HPGAM_00225 NC_017371.1 44708 45142 R hypothetical protein complement(44708..45142) Helicobacter pylori Gambia94/24 12359855 YP_005779787.1 CDS HPGAM_00230 NC_017371.1 45319 46317 R COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein complement(45319..46317) Helicobacter pylori Gambia94/24 12359856 YP_005779788.1 CDS HPGAM_00235 NC_017371.1 46320 48572 R COG0068 Hydrogenase maturation factor; putative transcriptional regulator complement(46320..48572) Helicobacter pylori Gambia94/24 12359857 YP_005779789.1 CDS HPGAM_00240 NC_017371.1 48569 49561 R COG2957 Peptidylarginine deiminase and related enzymes; hypothetical protein complement(48569..49561) Helicobacter pylori Gambia94/24 12359858 YP_005779790.1 CDS HPGAM_00245 NC_017371.1 49620 50312 R COG0863 DNA modification methylase; putative type II DNA modification enzyme (methyltransferase) complement(49620..50312) Helicobacter pylori Gambia94/24 12359859 YP_005779791.1 CDS HPGAM_00250 NC_017371.1 50290 50847 R COG0270 Site-specific DNA methylase; putative type II DNA modification enzyme (methyltransferase) complement(50290..50847) Helicobacter pylori Gambia94/24 12359860 YP_005779792.1 CDS HPGAM_00255 NC_017371.1 51298 52329 R COG2189 Adenine specific DNA methylase Mod; putative type II DNA modification enzyme (methyltransferase) complement(51298..52329) Helicobacter pylori Gambia94/24 12359861 YP_005779793.1 CDS HPGAM_00260 NC_017371.1 52339 53121 R putative type II restriction enzyme complement(52339..53121) Helicobacter pylori Gambia94/24 12359862 YP_005779794.1 CDS HPGAM_00265 NC_017371.1 53244 53345 R putative type II DNA modification enzyme (methyltransferase) complement(53244..53345) Helicobacter pylori Gambia94/24 12359863 YP_005779795.1 CDS HPGAM_00270 NC_017371.1 53603 54760 R hypothetical protein complement(53603..54760) Helicobacter pylori Gambia94/24 12359864 YP_005779796.1 CDS HPGAM_00275 NC_017371.1 54760 57228 R COG0270 Site-specific DNA methylase; type II R-M system methyltransferase complement(54760..57228) Helicobacter pylori Gambia94/24 12359865 YP_005779797.1 CDS HPGAM_00280 NC_017371.1 57269 58759 R COG0591 Na+/proline symporter; sodium/proline symporter complement(57269..58759) Helicobacter pylori Gambia94/24 12359866 YP_005779798.1 CDS HPGAM_00285 NC_017371.1 58786 62343 R COG0506 Proline dehydrogenase; proline/delta 1-pyrroline-5-carboxylate dehydrogenase complement(58786..62343) Helicobacter pylori Gambia94/24 12359867 YP_005779799.1 CDS HPGAM_00290 NC_017371.1 62665 62874 D hypothetical protein 62665..62874 Helicobacter pylori Gambia94/24 12359868 YP_005779800.1 CDS HPGAM_00295 NC_017371.1 62988 63095 D hypothetical protein 62988..63095 Helicobacter pylori Gambia94/24 12359869 YP_005779801.1 CDS HPGAM_00300 NC_017371.1 63655 63924 D hypothetical protein 63655..63924 Helicobacter pylori Gambia94/24 12359870 YP_005779802.1 CDS HPGAM_00325 NC_017371.1 67322 67891 D hypothetical protein 67322..67891 Helicobacter pylori Gambia94/24 12359871 YP_005779803.1 CDS HPGAM_00330 NC_017371.1 67907 68167 D hypothetical protein 67907..68167 Helicobacter pylori Gambia94/24 12359872 YP_005779804.1 CDS HPGAM_00335 NC_017371.1 68178 69671 D hypothetical protein 68178..69671 Helicobacter pylori Gambia94/24 12359873 YP_005779805.1 CDS HPGAM_00340 NC_017371.1 69641 70060 D hypothetical protein 69641..70060 Helicobacter pylori Gambia94/24 12359874 YP_005779806.1 CDS HPGAM_00345 NC_017371.1 70065 70409 D hypothetical protein 70065..70409 Helicobacter pylori Gambia94/24 12359875 YP_005779807.1 CDS HPGAM_00350 NC_017371.1 70406 71020 D ATP-binding protein 70406..71020 Helicobacter pylori Gambia94/24 12359876 YP_005779808.1 CDS HPGAM_00365 NC_017371.1 72895 73692 R COG0829 Urease accessory protein UreH; Urease accessory protein UreH complement(72895..73692) Helicobacter pylori Gambia94/24 12359877 YP_005779809.1 CDS HPGAM_00370 NC_017371.1 73692 74291 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein UreG complement(73692..74291) Helicobacter pylori Gambia94/24 12359878 YP_005779810.1 CDS HPGAM_00375 NC_017371.1 74320 75090 R COG0830 Urease accessory protein UreF; urease accessory protein complement(74320..75090) Helicobacter pylori Gambia94/24 12359879 YP_005779811.1 CDS ureE NC_017371.1 75114 75626 R COG2371 Urease accessory protein UreE; urease accessory protein UreE complement(75114..75626) Helicobacter pylori Gambia94/24 12359880 YP_005779812.1 CDS HPGAM_00385 NC_017371.1 75628 76215 R COG1138 Cytochrome c biogenesis factor; urea transporter complement(75628..76215) Helicobacter pylori Gambia94/24 12359881 YP_005779813.1 CDS ureB NC_017371.1 76438 78147 R COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta complement(76438..78147) Helicobacter pylori Gambia94/24 12359882 YP_005779814.1 CDS HPGAM_00395 NC_017371.1 78151 78867 R COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha complement(78151..78867) Helicobacter pylori Gambia94/24 12359883 YP_005779815.1 CDS lspA NC_017371.1 79231 79716 R COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase complement(79231..79716) Helicobacter pylori Gambia94/24 12359885 YP_005779816.1 CDS glmM NC_017371.1 79697 81034 R COG1109 Phosphomannomutase; phosphoglucosamine mutase complement(79697..81034) Helicobacter pylori Gambia94/24 12359886 YP_005779817.1 CDS rpsT NC_017371.1 81124 81393 D COG0268 Ribosomal protein S20; 30S ribosomal protein S20 81124..81393 Helicobacter pylori Gambia94/24 12359887 YP_005779818.1 CDS prfA NC_017371.1 81520 82578 D COG0216 Protein chain release factor A; peptide chain release factor 1 81520..82578 Helicobacter pylori Gambia94/24 12359888 YP_005779819.1 CDS HPGAM_00420 NC_017371.1 82975 83229 D hypothetical protein 82975..83229 Helicobacter pylori Gambia94/24 12359889 YP_005779820.1 CDS HPGAM_00425 NC_017371.1 83240 85048 D outer membrane protein (omp3) 83240..85048 Helicobacter pylori Gambia94/24 12359890 YP_005779821.1 CDS HPGAM_00430 NC_017371.1 85298 87070 D hypothetical protein 85298..87070 Helicobacter pylori Gambia94/24 12359891 YP_005779822.1 CDS HPGAM_00435 NC_017371.1 87180 87290 D hypothetical protein 87180..87290 Helicobacter pylori Gambia94/24 12359892 YP_005779823.1 CDS HPGAM_00440 NC_017371.1 87485 89506 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein complement(87485..89506) Helicobacter pylori Gambia94/24 12359893 YP_005779824.1 CDS HPGAM_00445 NC_017371.1 89540 89677 D hypothetical protein 89540..89677 Helicobacter pylori Gambia94/24 12359894 YP_005779825.1 CDS rpsI NC_017371.1 89681 90070 R COG0103 Ribosomal protein S9; 30S ribosomal protein S9 complement(89681..90070) Helicobacter pylori Gambia94/24 12359895 YP_005779826.1 CDS rplM NC_017371.1 90067 90492 R COG0102 Ribosomal protein L13; 50S ribosomal protein L13 complement(90067..90492) Helicobacter pylori Gambia94/24 12359896 YP_005779827.1 CDS HPGAM_00460 NC_017371.1 90588 90704 R hypothetical protein complement(90588..90704) Helicobacter pylori Gambia94/24 12359897 YP_005779828.1 CDS HPGAM_00465 NC_017371.1 90846 91034 R hypothetical protein complement(90846..91034) Helicobacter pylori Gambia94/24 12359898 YP_005779829.1 CDS HPGAM_00470 NC_017371.1 91041 92393 R COG0579 Predicted dehydrogenase; hypothetical protein complement(91041..92393) Helicobacter pylori Gambia94/24 12359899 YP_005779830.1 CDS HPGAM_00475 NC_017371.1 92447 93820 R COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein complement(92447..93820) Helicobacter pylori Gambia94/24 12359900 YP_005779831.1 CDS HPGAM_00480 NC_017371.1 93840 95885 R COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD complement(93840..95885) Helicobacter pylori Gambia94/24 12359901 YP_005779832.1 CDS HPGAM_00485 NC_017371.1 96109 96804 R COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase complement(96109..96804) Helicobacter pylori Gambia94/24 12359902 YP_005779833.1 CDS HPGAM_00490 NC_017371.1 96815 97744 R COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase complement(96815..97744) Helicobacter pylori Gambia94/24 12359903 YP_005779834.1 CDS HPGAM_00495 NC_017371.1 98185 99171 D COG2958 Uncharacterized protein conserved in bacteria; HrgA protein 98185..99171 Helicobacter pylori Gambia94/24 12359905 YP_005779835.1 CDS HPGAM_00500 NC_017371.1 99175 99999 D COG0863 DNA modification methylase; type II adenine methyltransferase 99175..99999 Helicobacter pylori Gambia94/24 12359906 YP_005779836.1 CDS HPGAM_00515 NC_017371.1 101012 101542 R COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; hypothetical protein complement(101012..101542) Helicobacter pylori Gambia94/24 12359907 YP_005779837.1 CDS HPGAM_00520 NC_017371.1 101615 102559 D COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 101615..102559 Helicobacter pylori Gambia94/24 12359908 YP_005779838.1 CDS HPGAM_00525 NC_017371.1 102734 103447 R hypothetical protein complement(102734..103447) Helicobacter pylori Gambia94/24 12359909 YP_005779839.1 CDS HPGAM_00530 NC_017371.1 103552 105012 R COG0498 Threonine synthase; threonine synthase complement(103552..105012) Helicobacter pylori Gambia94/24 12359910 YP_005779840.1 CDS HPGAM_00535 NC_017371.1 105222 107249 D COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 105222..107249 Helicobacter pylori Gambia94/24 12359911 YP_005779841.1 CDS HPGAM_00540 NC_017371.1 107249 108355 D COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein 107249..108355 Helicobacter pylori Gambia94/24 12359912 YP_005779842.1 CDS HPGAM_00545 NC_017371.1 108572 109333 D hypothetical protein 108572..109333 Helicobacter pylori Gambia94/24 12359913 YP_005779843.1 CDS HPGAM_00550 NC_017371.1 109305 110096 R COG0463 Glycosyltransferases involved in cell wall biogenesis; hypothetical protein complement(109305..110096) Helicobacter pylori Gambia94/24 12359914 YP_005779844.1 CDS HPGAM_00555 NC_017371.1 110127 111782 R COG0840 Methyl-accepting chemotaxis protein; Methyl-accepting chemotaxis protein tlpB; putative signal peptide complement(110127..111782) Helicobacter pylori Gambia94/24 12359915 YP_005779845.1 CDS HPGAM_00560 NC_017371.1 112037 113782 R COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; 2',3'-cyclic-nucleotide 2'-phosphodiesterase complement(112037..113782) Helicobacter pylori Gambia94/24 12359916 YP_005779846.1 CDS HPGAM_00565 NC_017371.1 113926 114384 R COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase complement(113926..114384) Helicobacter pylori Gambia94/24 12359917 YP_005779847.1 CDS HPGAM_00570 NC_017371.1 114422 115564 R COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase complement(114422..115564) Helicobacter pylori Gambia94/24 12359918 YP_005779848.1 CDS HPGAM_00575 NC_017371.1 115585 116502 R COG0031 Cysteine synthase; cysteine synthase B complement(115585..116502) Helicobacter pylori Gambia94/24 12359919 YP_005779849.1 CDS dnaK NC_017371.1 117449 119311 R COG0443 Molecular chaperone; molecular chaperone DnaK complement(117449..119311) Helicobacter pylori Gambia94/24 12359920 YP_005779850.1 CDS HPGAM_00595 NC_017371.1 119342 119917 R COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE complement(119342..119917) Helicobacter pylori Gambia94/24 12359921 YP_005779851.1 CDS HPGAM_00600 NC_017371.1 119917 120747 R COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor complement(119917..120747) Helicobacter pylori Gambia94/24 12359922 YP_005779852.1 CDS HPGAM_00605 NC_017371.1 120957 121595 D COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 120957..121595 Helicobacter pylori Gambia94/24 12359923 YP_005779853.1 CDS HPGAM_00610 NC_017371.1 121616 121912 D hypothetical protein 121616..121912 Helicobacter pylori Gambia94/24 12359924 YP_005779854.1 CDS HPGAM_00615 NC_017371.1 121940 123823 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(121940..123823) Helicobacter pylori Gambia94/24 12359925 YP_005779855.1 CDS HPGAM_00620 NC_017371.1 123871 125415 R COG1344 Flagellin and related hook-associated proteins; flagellin B complement(123871..125415) Helicobacter pylori Gambia94/24 12359926 YP_005779856.1 CDS HPGAM_00625 NC_017371.1 125582 127789 D COG0550 Topoisomerase IA; DNA topoisomerase I 125582..127789 Helicobacter pylori Gambia94/24 12359927 YP_005779857.1 CDS HPGAM_00630 NC_017371.1 127782 128708 D COG0731 Fe-S oxidoreductases; hypothetical protein 127782..128708 Helicobacter pylori Gambia94/24 12359928 YP_005779858.1 CDS HPGAM_00635 NC_017371.1 128852 130090 R hypothetical protein complement(128852..130090) Helicobacter pylori Gambia94/24 12359929 YP_005779859.1 CDS HPGAM_00640 NC_017371.1 130186 132624 R COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase complement(130186..132624) Helicobacter pylori Gambia94/24 12359930 YP_005779860.1 CDS HPGAM_00645 NC_017371.1 132833 132946 D hypothetical protein 132833..132946 Helicobacter pylori Gambia94/24 12359931 YP_005779861.1 CDS thrS NC_017371.1 132986 134824 D COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 132986..134824 Helicobacter pylori Gambia94/24 12359932 YP_005779862.1 CDS infC NC_017371.1 134821 135432 D COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 134821..135432 Helicobacter pylori Gambia94/24 12359933 YP_005779863.1 CDS rpmI NC_017371.1 135413 135607 D COG0291 Ribosomal protein L35; 50S ribosomal protein L35 135413..135607 Helicobacter pylori Gambia94/24 12359934 YP_005779864.1 CDS rplT NC_017371.1 135702 136052 D COG0292 Ribosomal protein L20; 50S ribosomal protein L20 135702..136052 Helicobacter pylori Gambia94/24 12359935 YP_005779865.1 CDS HPGAM_00670 NC_017371.1 136251 137111 D hypothetical protein 136251..137111 Helicobacter pylori Gambia94/24 12359936 YP_005779866.1 CDS HPGAM_00675 NC_017371.1 137602 138039 D hypothetical protein 137602..138039 Helicobacter pylori Gambia94/24 12359937 YP_005779867.1 CDS HPGAM_00680 NC_017371.1 138444 139301 D hypothetical protein 138444..139301 Helicobacter pylori Gambia94/24 12359938 YP_005779868.1 CDS HPGAM_00685 NC_017371.1 139964 141331 R COG1760 L-serine deaminase; L-serine deaminase complement(139964..141331) Helicobacter pylori Gambia94/24 12359939 YP_005779869.1 CDS HPGAM_00690 NC_017371.1 141331 142572 R COG0814 Amino acid permeases; L-serine transporter complement(141331..142572) Helicobacter pylori Gambia94/24 12359940 YP_005779870.1 CDS HPGAM_00695 NC_017371.1 142754 144103 D COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 142754..144103 Helicobacter pylori Gambia94/24 12359941 YP_005779871.1 CDS HPGAM_00700 NC_017371.1 144392 144526 D hypothetical protein 144392..144526 Helicobacter pylori Gambia94/24 12359942 YP_005779872.1 CDS HPGAM_00705 NC_017371.1 144750 145208 R COG1225 Peroxiredoxin; bacterioferritin comigratory protein complement(144750..145208) Helicobacter pylori Gambia94/24 12359943 YP_005779873.1 CDS HPGAM_00710 NC_017371.1 145218 145853 R COG1556 Uncharacterized conserved protein; hypothetical protein complement(145218..145853) Helicobacter pylori Gambia94/24 12359944 YP_005779874.1 CDS HPGAM_00715 NC_017371.1 145846 147291 R COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; iron-sulfur cluster binding protein complement(145846..147291) Helicobacter pylori Gambia94/24 12359945 YP_005779875.1 CDS HPGAM_00720 NC_017371.1 147320 148048 R COG0247 Fe-S oxidoreductase; (S)-2-hydroxy-acid oxidase complement(147320..148048) Helicobacter pylori Gambia94/24 12359946 YP_005779876.1 CDS HPGAM_00725 NC_017371.1 148273 149922 D COG1620 L-lactate permease; L-lactate permease 148273..149922 Helicobacter pylori Gambia94/24 12359947 YP_005779877.1 CDS HPGAM_00730 NC_017371.1 149971 151626 D COG1620 L-lactate permease; L-lactate permease 149971..151626 Helicobacter pylori Gambia94/24 12359948 YP_005779878.1 CDS HPGAM_00735 NC_017371.1 151650 152636 R COG1194 A/G-specific DNA glycosylase; DNA glycosylase MutY complement(151650..152636) Helicobacter pylori Gambia94/24 12359949 YP_005779879.1 CDS HPGAM_00740 NC_017371.1 152637 154085 R COG0471 Di- and tricarboxylate transporters; hypothetical protein complement(152637..154085) Helicobacter pylori Gambia94/24 12359950 YP_005779880.1 CDS HPGAM_00745 NC_017371.1 154255 155721 D COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 154255..155721 Helicobacter pylori Gambia94/24 12359951 YP_005779881.1 CDS HPGAM_00750 NC_017371.1 155734 156432 D COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 155734..156432 Helicobacter pylori Gambia94/24 12359952 YP_005779882.1 CDS HPGAM_00755 NC_017371.1 156443 156661 D cytochrome c oxidase, cbb3-type, CcoQ subunit 156443..156661 Helicobacter pylori Gambia94/24 12359953 YP_005779883.1 CDS HPGAM_00760 NC_017371.1 156663 157541 D COG2010 Cytochrome c, mono- and diheme variants; cytochrome c oxidase, cbb3-type subunit III 156663..157541 Helicobacter pylori Gambia94/24 12359954 YP_005779884.1 CDS HPGAM_00765 NC_017371.1 157552 157758 D hypothetical protein 157552..157758 Helicobacter pylori Gambia94/24 12359955 YP_005779885.1 CDS HPGAM_00770 NC_017371.1 157755 157862 D hypothetical protein 157755..157862 Helicobacter pylori Gambia94/24 12359956 YP_005779886.1 CDS HPGAM_00775 NC_017371.1 157859 158452 D COG0443 Molecular chaperone; hypothetical protein 157859..158452 Helicobacter pylori Gambia94/24 12359957 YP_005779887.1 CDS HPGAM_00780 NC_017371.1 158465 159046 D hypothetical protein 158465..159046 Helicobacter pylori Gambia94/24 12359958 YP_005779888.1 CDS HPGAM_00785 NC_017371.1 159801 159959 R hypothetical protein complement(159801..159959) Helicobacter pylori Gambia94/24 12359959 YP_005779889.1 CDS HPGAM_00790 NC_017371.1 160422 161285 R COG2107 Predicted periplasmic solute-binding protein; hypothetical protein complement(160422..161285) Helicobacter pylori Gambia94/24 12359960 YP_005779890.1 CDS recA NC_017371.1 161384 162427 D COG0468 RecA/RadA recombinase; recombinase A 161384..162427 Helicobacter pylori Gambia94/24 12359961 YP_005779891.1 CDS eno NC_017371.1 162439 163719 D COG0148 Enolase; enolase 162439..163719 Helicobacter pylori Gambia94/24 12359962 YP_005779892.1 CDS HPGAM_00805 NC_017371.1 163712 163987 D hypothetical protein 163712..163987 Helicobacter pylori Gambia94/24 12359963 YP_005779893.1 CDS HPGAM_00810 NC_017371.1 164004 164600 D hypothetical protein 164004..164600 Helicobacter pylori Gambia94/24 12359964 YP_005779894.1 CDS aroK NC_017371.1 164605 165093 D COG0703 Shikimate kinase; shikimate kinase 164605..165093 Helicobacter pylori Gambia94/24 12359965 YP_005779895.1 CDS HPGAM_00820 NC_017371.1 165115 166071 D hypothetical protein 165115..166071 Helicobacter pylori Gambia94/24 12359966 YP_005779896.1 CDS HPGAM_00825 NC_017371.1 166068 167204 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(166068..167204) Helicobacter pylori Gambia94/24 12359967 YP_005779897.1 CDS HPGAM_00830 NC_017371.1 167357 168274 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 167357..168274 Helicobacter pylori Gambia94/24 12359968 YP_005779898.1 CDS HPGAM_00835 NC_017371.1 168957 169679 R COG0217 Uncharacterized conserved protein; hypothetical protein complement(168957..169679) Helicobacter pylori Gambia94/24 12359969 YP_005779899.1 CDS HPGAM_00840 NC_017371.1 169680 170651 R COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase complement(169680..170651) Helicobacter pylori Gambia94/24 12359970 YP_005779900.1 CDS HPGAM_00845 NC_017371.1 170722 172005 R COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein complement(170722..172005) Helicobacter pylori Gambia94/24 12359971 YP_005779901.1 CDS HPGAM_00850 NC_017371.1 172029 172706 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator complement(172029..172706) Helicobacter pylori Gambia94/24 12359972 YP_005779902.1 CDS HPGAM_00855 NC_017371.1 172906 173031 D hypothetical protein 172906..173031 Helicobacter pylori Gambia94/24 12359973 YP_005779903.1 CDS HPGAM_00860 NC_017371.1 173114 173590 R hypothetical protein complement(173114..173590) Helicobacter pylori Gambia94/24 12359974 YP_005779904.1 CDS HPGAM_00865 NC_017371.1 173581 173844 R COG0457 FOG: TPR repeat; hypothetical protein complement(173581..173844) Helicobacter pylori Gambia94/24 12359975 YP_005779905.1 CDS HPGAM_00870 NC_017371.1 173878 175158 R COG0826 Collagenase and related proteases; collagenase complement(173878..175158) Helicobacter pylori Gambia94/24 12359976 YP_005779906.1 CDS HPGAM_00875 NC_017371.1 175161 175892 R hypothetical protein complement(175161..175892) Helicobacter pylori Gambia94/24 12359977 YP_005779907.1 CDS prfB NC_017371.1 175962 177053 R COG1186 Protein chain release factor B; peptide chain release factor 2 complement(175962..177053) Helicobacter pylori Gambia94/24 12359978 YP_005779908.1 CDS HPGAM_00885 NC_017371.1 177114 178289 R COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein complement(177114..178289) Helicobacter pylori Gambia94/24 12359979 YP_005779909.1 CDS fliR NC_017371.1 178299 179066 R COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR complement(178299..179066) Helicobacter pylori Gambia94/24 12359980 YP_005779910.1 CDS HPGAM_00895 NC_017371.1 179104 179787 R hypothetical protein complement(179104..179787) Helicobacter pylori Gambia94/24 12359981 YP_005779911.1 CDS HPGAM_00900 NC_017371.1 179890 180108 R hypothetical protein complement(179890..180108) Helicobacter pylori Gambia94/24 12359982 YP_005779912.1 CDS HPGAM_00905 NC_017371.1 180256 181155 D COG0760 Parvulin-like peptidyl-prolyl isomerase; putative peptidyl-prolyl cis-trans isomerase 180256..181155 Helicobacter pylori Gambia94/24 12359983 YP_005779913.1 CDS HPGAM_00910 NC_017371.1 181172 182095 D COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 181172..182095 Helicobacter pylori Gambia94/24 12359984 YP_005779914.1 CDS HPGAM_00915 NC_017371.1 182117 182680 D COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 182117..182680 Helicobacter pylori Gambia94/24 12359985 YP_005779915.1 CDS HPGAM_00920 NC_017371.1 183418 184440 R COG2089 Sialic acid synthase; sialic acid synthase complement(183418..184440) Helicobacter pylori Gambia94/24 12359986 YP_005779916.1 CDS HPGAM_00925 NC_017371.1 184443 185084 R COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein complement(184443..185084) Helicobacter pylori Gambia94/24 12359987 YP_005779917.1 CDS HPGAM_00930 NC_017371.1 185084 186358 R COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase complement(185084..186358) Helicobacter pylori Gambia94/24 12359988 YP_005779918.1 CDS HPGAM_00935 NC_017371.1 186594 187304 D COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 186594..187304 Helicobacter pylori Gambia94/24 12359989 YP_005779919.1 CDS lysS NC_017371.1 187314 188819 D COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 187314..188819 Helicobacter pylori Gambia94/24 12359990 YP_005779920.1 CDS HPGAM_00945 NC_017371.1 188819 190069 D COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 188819..190069 Helicobacter pylori Gambia94/24 12359991 YP_005779921.1 CDS HPGAM_00950 NC_017371.1 190079 190621 D hypothetical protein 190079..190621 Helicobacter pylori Gambia94/24 12359992 YP_005779922.1 CDS HPGAM_00955 NC_017371.1 190643 191452 D hypothetical protein 190643..191452 Helicobacter pylori Gambia94/24 12359993 YP_005779923.1 CDS HPGAM_00960 NC_017371.1 191847 193460 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(191847..193460) Helicobacter pylori Gambia94/24 12359994 YP_005779924.1 CDS HPGAM_00965 NC_017371.1 193706 194239 D COG2862 Predicted membrane protein; hypothetical protein 193706..194239 Helicobacter pylori Gambia94/24 12359995 YP_005779925.1 CDS HPGAM_00970 NC_017371.1 194246 195754 R COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; putative cardiolipin synthase complement(194246..195754) Helicobacter pylori Gambia94/24 12359996 YP_005779926.1 CDS frdB NC_017371.1 195776 196513 R COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit complement(195776..196513) Helicobacter pylori Gambia94/24 12359997 YP_005779927.1 CDS HPGAM_00980 NC_017371.1 196506 198650 R COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit complement(196506..198650) Helicobacter pylori Gambia94/24 12359998 YP_005779928.1 CDS HPGAM_00985 NC_017371.1 198660 199427 R COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; fumarate reductase cytochrome b-556 subunit complement(198660..199427) Helicobacter pylori Gambia94/24 12359999 YP_005779929.1 CDS tpiA NC_017371.1 199635 200339 D COG0149 Triosephosphate isomerase; triosephosphate isomerase 199635..200339 Helicobacter pylori Gambia94/24 12360000 YP_005779930.1 CDS HPGAM_00995 NC_017371.1 200349 201182 D COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 200349..201182 Helicobacter pylori Gambia94/24 12360001 YP_005779931.1 CDS lpxD NC_017371.1 201182 202192 D COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 201182..202192 Helicobacter pylori Gambia94/24 12360002 YP_005779932.1 CDS HPGAM_01005 NC_017371.1 202652 203560 R hypothetical protein complement(202652..203560) Helicobacter pylori Gambia94/24 12360003 YP_005779933.1 CDS HPGAM_01010 NC_017371.1 203560 204405 R hypothetical protein complement(203560..204405) Helicobacter pylori Gambia94/24 12360004 YP_005779934.1 CDS HPGAM_01015 NC_017371.1 204422 205303 R hypothetical protein complement(204422..205303) Helicobacter pylori Gambia94/24 12360005 YP_005779935.1 CDS HPGAM_01020 NC_017371.1 205356 205682 R hypothetical protein complement(205356..205682) Helicobacter pylori Gambia94/24 12360006 YP_005779936.1 CDS HPGAM_01025 NC_017371.1 205686 206255 R hypothetical protein complement(205686..206255) Helicobacter pylori Gambia94/24 12360007 YP_005779937.1 CDS HPGAM_01030 NC_017371.1 206255 207052 R hypothetical protein complement(206255..207052) Helicobacter pylori Gambia94/24 12360008 YP_005779938.1 CDS HPGAM_01035 NC_017371.1 207054 207599 R hypothetical protein complement(207054..207599) Helicobacter pylori Gambia94/24 12360009 YP_005779939.1 CDS HPGAM_01040 NC_017371.1 207646 207870 R hypothetical protein complement(207646..207870) Helicobacter pylori Gambia94/24 12360010 YP_005779940.1 CDS HPGAM_01045 NC_017371.1 207867 208862 R hypothetical protein complement(207867..208862) Helicobacter pylori Gambia94/24 12360011 YP_005779941.1 CDS HPGAM_01050 NC_017371.1 208866 209189 R hypothetical protein complement(208866..209189) Helicobacter pylori Gambia94/24 12360012 YP_005779942.1 CDS HPGAM_01055 NC_017371.1 209189 209422 R hypothetical protein complement(209189..209422) Helicobacter pylori Gambia94/24 12360013 YP_005779943.1 CDS HPGAM_01060 NC_017371.1 209434 209655 R hypothetical protein complement(209434..209655) Helicobacter pylori Gambia94/24 12360014 YP_005779944.1 CDS HPGAM_01065 NC_017371.1 209721 211277 R COG5410 Uncharacterized protein conserved in bacteria; phage-related CUP0950-like protein complement(209721..211277) Helicobacter pylori Gambia94/24 12360015 YP_005779945.1 CDS HPGAM_01070 NC_017371.1 211270 211380 R hypothetical protein complement(211270..211380) Helicobacter pylori Gambia94/24 12360016 YP_005779946.1 CDS HPGAM_01075 NC_017371.1 211392 213203 R hypothetical protein complement(211392..213203) Helicobacter pylori Gambia94/24 12360017 YP_005779947.1 CDS HPGAM_01080 NC_017371.1 213249 213692 R hypothetical protein complement(213249..213692) Helicobacter pylori Gambia94/24 12360018 YP_005779948.1 CDS HPGAM_01085 NC_017371.1 213791 214147 R hypothetical protein complement(213791..214147) Helicobacter pylori Gambia94/24 12360019 YP_005779949.1 CDS HPGAM_01090 NC_017371.1 214164 215303 R hypothetical protein complement(214164..215303) Helicobacter pylori Gambia94/24 12360020 YP_005779950.1 CDS HPGAM_01095 NC_017371.1 215313 215864 R hypothetical protein complement(215313..215864) Helicobacter pylori Gambia94/24 12360021 YP_005779951.1 CDS HPGAM_01100 NC_017371.1 216107 216694 R hypothetical protein complement(216107..216694) Helicobacter pylori Gambia94/24 12360022 YP_005779952.1 CDS HPGAM_01105 NC_017371.1 216691 217092 R hypothetical protein complement(216691..217092) Helicobacter pylori Gambia94/24 12360023 YP_005779953.1 CDS HPGAM_01110 NC_017371.1 217092 217487 R hypothetical protein complement(217092..217487) Helicobacter pylori Gambia94/24 12360024 YP_005779954.1 CDS HPGAM_01115 NC_017371.1 217484 217936 R hypothetical protein complement(217484..217936) Helicobacter pylori Gambia94/24 12360025 YP_005779955.1 CDS HPGAM_01120 NC_017371.1 217969 218292 R hypothetical protein complement(217969..218292) Helicobacter pylori Gambia94/24 12360026 YP_005779956.1 CDS HPGAM_01125 NC_017371.1 218292 219449 D COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 218292..219449 Helicobacter pylori Gambia94/24 12360027 YP_005779957.1 CDS ndk NC_017371.1 219515 219928 D COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase 219515..219928 Helicobacter pylori Gambia94/24 12360028 YP_005779958.1 CDS HPGAM_01135 NC_017371.1 219953 220309 D hypothetical protein 219953..220309 Helicobacter pylori Gambia94/24 12360029 YP_005779959.1 CDS rpmF NC_017371.1 220325 220471 D COG0333 Ribosomal protein L32; 50S ribosomal protein L32 220325..220471 Helicobacter pylori Gambia94/24 12360030 YP_005779960.1 CDS HPGAM_01145 NC_017371.1 220549 221568 D COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative phosphate acyltransferase 220549..221568 Helicobacter pylori Gambia94/24 12360031 YP_005779961.1 CDS HPGAM_01150 NC_017371.1 221592 222587 D COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 221592..222587 Helicobacter pylori Gambia94/24 12360032 YP_005779962.1 CDS HPGAM_01155 NC_017371.1 222630 222932 D hypothetical protein 222630..222932 Helicobacter pylori Gambia94/24 12360033 YP_005779963.1 CDS HPGAM_01160 NC_017371.1 222996 223172 D hypothetical protein 222996..223172 Helicobacter pylori Gambia94/24 12360034 YP_005779964.1 CDS HPGAM_01165 NC_017371.1 223613 223996 R hypothetical protein complement(223613..223996) Helicobacter pylori Gambia94/24 12360035 YP_005779965.1 CDS HPGAM_01170 NC_017371.1 224007 227207 R COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog; hypothetical protein complement(224007..227207) Helicobacter pylori Gambia94/24 12360036 YP_005779966.1 CDS HPGAM_01175 NC_017371.1 227304 228410 D COG0489 ATPases involved in chromosome partitioning; hypothetical protein 227304..228410 Helicobacter pylori Gambia94/24 12360037 YP_005779967.1 CDS HPGAM_01180 NC_017371.1 228470 229525 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(228470..229525) Helicobacter pylori Gambia94/24 12360038 YP_005779968.1 CDS HPGAM_01185 NC_017371.1 229549 229668 R putative lipopolysaccharide biosynthesis protein complement(229549..229668) Helicobacter pylori Gambia94/24 12360039 YP_005779969.1 CDS HPGAM_01190 NC_017371.1 229821 231173 D hypothetical protein 229821..231173 Helicobacter pylori Gambia94/24 12360040 YP_005779970.1 CDS HPGAM_01195 NC_017371.1 231170 231295 R hypothetical protein complement(231170..231295) Helicobacter pylori Gambia94/24 12360041 YP_005779971.1 CDS HPGAM_01200 NC_017371.1 231276 233141 D COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 231276..233141 Helicobacter pylori Gambia94/24 12360042 YP_005779972.1 CDS HPGAM_01205 NC_017371.1 233309 234061 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(233309..234061) Helicobacter pylori Gambia94/24 12360043 YP_005779973.1 CDS HPGAM_01210 NC_017371.1 234508 235674 R COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase complement(234508..235674) Helicobacter pylori Gambia94/24 12360044 YP_005779974.1 CDS HPGAM_01215 NC_017371.1 235684 237549 R COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(235684..237549) Helicobacter pylori Gambia94/24 12360045 YP_005779975.1 CDS HPGAM_01220 NC_017371.1 237645 239291 D COG0471 Di- and tricarboxylate transporters; sodium-dependent transporter 237645..239291 Helicobacter pylori Gambia94/24 12360046 YP_005779976.1 CDS HPGAM_01225 NC_017371.1 239304 240104 D COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 239304..240104 Helicobacter pylori Gambia94/24 12360047 YP_005779977.1 CDS HPGAM_01230 NC_017371.1 240105 241211 D COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 240105..241211 Helicobacter pylori Gambia94/24 12360048 YP_005779978.1 CDS HPGAM_01245 NC_017371.1 242479 243030 R COG1881 Phospholipid-binding protein; hypothetical protein complement(242479..243030) Helicobacter pylori Gambia94/24 12360049 YP_005779979.1 CDS HPGAM_01250 NC_017371.1 243171 243635 D hypothetical protein 243171..243635 Helicobacter pylori Gambia94/24 12360050 YP_005779980.1 CDS HPGAM_01255 NC_017371.1 243804 244967 D COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 243804..244967 Helicobacter pylori Gambia94/24 12360051 YP_005779981.1 CDS HPGAM_01260 NC_017371.1 244989 245969 D COG0822 NifU homolog involved in Fe-S cluster formation; nifU-like protein 244989..245969 Helicobacter pylori Gambia94/24 12360052 YP_005779982.1 CDS HPGAM_01265 NC_017371.1 246129 246365 D hypothetical protein 246129..246365 Helicobacter pylori Gambia94/24 12360053 YP_005779983.1 CDS HPGAM_01270 NC_017371.1 246476 247822 D COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 246476..247822 Helicobacter pylori Gambia94/24 12360054 YP_005779984.1 CDS HPGAM_01275 NC_017371.1 247943 249022 D COG0225 Peptide methionine sulfoxide reductase; bifunctional methionine sulfoxide reductase A/B 247943..249022 Helicobacter pylori Gambia94/24 12360055 YP_005779985.1 CDS HPGAM_01280 NC_017371.1 249192 249308 R hypothetical protein complement(249192..249308) Helicobacter pylori Gambia94/24 12360056 YP_005779986.1 CDS HPGAM_01285 NC_017371.1 249428 250261 R COG0730 Predicted permeases; hypothetical protein complement(249428..250261) Helicobacter pylori Gambia94/24 12360057 YP_005779987.1 CDS HPGAM_01290 NC_017371.1 250384 250476 D hypothetical protein 250384..250476 Helicobacter pylori Gambia94/24 12360058 YP_005779988.1 CDS HPGAM_01295 NC_017371.1 250473 252554 R outer membrane protein complement(250473..252554) Helicobacter pylori Gambia94/24 12360059 YP_005779989.1 CDS HPGAM_01300 NC_017371.1 252818 253975 D COG0659 Sulfate permease and related transporters (MFS superfamily); hypothetical protein 252818..253975 Helicobacter pylori Gambia94/24 12360060 YP_005779990.1 CDS HPGAM_01305 NC_017371.1 254219 255670 R Outer membrane protein/porin complement(254219..255670) Helicobacter pylori Gambia94/24 12360062 YP_005779991.1 CDS HPGAM_01310 NC_017371.1 255862 256593 R COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase complement(255862..256593) Helicobacter pylori Gambia94/24 12360063 YP_005779992.1 CDS HPGAM_01315 NC_017371.1 256710 257507 D COG1651 Protein-disulfide isomerase; hypothetical protein 256710..257507 Helicobacter pylori Gambia94/24 12360064 YP_005779993.1 CDS HPGAM_01320 NC_017371.1 257521 258171 D hypothetical protein 257521..258171 Helicobacter pylori Gambia94/24 12360065 YP_005779994.1 CDS HPGAM_01325 NC_017371.1 258197 259369 D COG0754 Glutathionylspermidine synthase; hypothetical protein 258197..259369 Helicobacter pylori Gambia94/24 12360066 YP_005779995.1 CDS HPGAM_01330 NC_017371.1 259369 259899 D hypothetical protein 259369..259899 Helicobacter pylori Gambia94/24 12360067 YP_005779996.1 CDS HPGAM_01335 NC_017371.1 259884 260012 R hypothetical protein complement(259884..260012) Helicobacter pylori Gambia94/24 12360068 YP_005779997.1 CDS HPGAM_01340 NC_017371.1 260521 260685 R hypothetical protein complement(260521..260685) Helicobacter pylori Gambia94/24 12360069 YP_005779998.1 CDS HPGAM_01345 NC_017371.1 260682 261749 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(260682..261749) Helicobacter pylori Gambia94/24 12360070 YP_005779999.1 CDS HPGAM_01350 NC_017371.1 261859 262224 R hypothetical protein complement(261859..262224) Helicobacter pylori Gambia94/24 12360071 YP_005780000.1 CDS hemC NC_017371.1 262224 263144 R COG0181 Porphobilinogen deaminase; porphobilinogen deaminase complement(262224..263144) Helicobacter pylori Gambia94/24 12360072 YP_005780001.1 CDS HPGAM_01360 NC_017371.1 263155 264888 R COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase complement(263155..264888) Helicobacter pylori Gambia94/24 12360073 YP_005780002.1 CDS hemA NC_017371.1 264892 266241 R COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase complement(264892..266241) Helicobacter pylori Gambia94/24 12360074 YP_005780003.1 CDS HPGAM_01370 NC_017371.1 266241 267164 R COG0142 Geranylgeranyl pyrophosphate synthase; putative octaprenyl-diphosphate synthase complement(266241..267164) Helicobacter pylori Gambia94/24 12360075 YP_005780004.1 CDS HPGAM_01375 NC_017371.1 267174 267569 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; hypothetical protein complement(267174..267569) Helicobacter pylori Gambia94/24 12360076 YP_005780005.1 CDS HPGAM_01380 NC_017371.1 267562 267846 R hypothetical protein complement(267562..267846) Helicobacter pylori Gambia94/24 12360077 YP_005780006.1 CDS HPGAM_01385 NC_017371.1 267867 268301 R COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); neutrophil activating protein complement(267867..268301) Helicobacter pylori Gambia94/24 12360078 YP_005780007.1 CDS HPGAM_01390 NC_017371.1 268508 269668 R COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein complement(268508..269668) Helicobacter pylori Gambia94/24 12360079 YP_005780008.1 CDS HPGAM_01395 NC_017371.1 269665 269982 R hypothetical protein complement(269665..269982) Helicobacter pylori Gambia94/24 12360080 YP_005780009.1 CDS flgI NC_017371.1 269979 271007 R COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein complement(269979..271007) Helicobacter pylori Gambia94/24 12360081 YP_005780010.1 CDS HPGAM_01405 NC_017371.1 271192 272667 D COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DeaD 271192..272667 Helicobacter pylori Gambia94/24 12360082 YP_005780011.1 CDS HPGAM_01410 NC_017371.1 272688 273776 D COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 272688..273776 Helicobacter pylori Gambia94/24 12360083 YP_005780012.1 CDS HPGAM_01415 NC_017371.1 273783 274322 D hypothetical protein 273783..274322 Helicobacter pylori Gambia94/24 12360084 YP_005780013.1 CDS HPGAM_01420 NC_017371.1 274405 275955 R COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; ABC transporter ATP-binding protein complement(274405..275955) Helicobacter pylori Gambia94/24 12360085 YP_005780014.1 CDS HPGAM_01425 NC_017371.1 275965 276987 R COG4239 ABC-type uncharacterized transport system, permease component; oligopeptide permease integral membrane protein complement(275965..276987) Helicobacter pylori Gambia94/24 12360086 YP_005780015.1 CDS HPGAM_01430 NC_017371.1 277259 277351 D hypothetical protein 277259..277351 Helicobacter pylori Gambia94/24 12360088 YP_005780016.1 CDS HPGAM_01435 NC_017371.1 277332 278768 D Outer membrane protein HopF; putative signal peptide 277332..278768 Helicobacter pylori Gambia94/24 12360089 YP_005780017.1 CDS HPGAM_01440 NC_017371.1 278781 280193 D COG1066 Predicted ATP-dependent serine protease; Outer membrane protein HopG; putative signal peptide 278781..280193 Helicobacter pylori Gambia94/24 12360090 YP_005780018.1 CDS HPGAM_01445 NC_017371.1 280294 281529 D COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 280294..281529 Helicobacter pylori Gambia94/24 12360091 YP_005780019.1 CDS HPGAM_01450 NC_017371.1 281526 281954 D hypothetical protein 281526..281954 Helicobacter pylori Gambia94/24 12360092 YP_005780020.1 CDS HPGAM_01455 NC_017371.1 281947 282705 D COG3334 Uncharacterized conserved protein; hypothetical protein 281947..282705 Helicobacter pylori Gambia94/24 12360093 YP_005780021.1 CDS HPGAM_01460 NC_017371.1 282702 283757 D COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein 282702..283757 Helicobacter pylori Gambia94/24 12360094 YP_005780022.1 CDS xseA NC_017371.1 283770 285032 D COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 283770..285032 Helicobacter pylori Gambia94/24 12360095 YP_005780023.1 CDS HPGAM_01470 NC_017371.1 285051 286223 R COG2189 Adenine specific DNA methylase Mod; type II DNA modification enzyme (methyltransferase) complement(285051..286223) Helicobacter pylori Gambia94/24 12360096 YP_005780024.1 CDS HPGAM_01475 NC_017371.1 286216 286830 R hypothetical protein complement(286216..286830) Helicobacter pylori Gambia94/24 12360097 YP_005780025.1 CDS HPGAM_01490 NC_017371.1 287631 288389 D COG0863 DNA modification methylase; putative adenine-specific DNA-methyltransferase 287631..288389 Helicobacter pylori Gambia94/24 12360098 YP_005780026.1 CDS HPGAM_01495 NC_017371.1 288463 291033 D COG0542 ATPases with chaperone activity, ATP-binding subunit; heat shock protein 288463..291033 Helicobacter pylori Gambia94/24 12360099 YP_005780027.1 CDS HPGAM_01500 NC_017371.1 291089 291808 D COG0785 Cytochrome c biogenesis protein; cytochrome c biogenesis protein 291089..291808 Helicobacter pylori Gambia94/24 12360100 YP_005780028.1 CDS HPGAM_01505 NC_017371.1 291818 292954 D COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 291818..292954 Helicobacter pylori Gambia94/24 12360101 YP_005780029.1 CDS HPGAM_01510 NC_017371.1 292939 294168 D COG0402 Cytosine deaminase and related metal-dependent hydrolases; chlorohydrolase 292939..294168 Helicobacter pylori Gambia94/24 12360102 YP_005780030.1 CDS HPGAM_01515 NC_017371.1 294415 294657 D hypothetical protein 294415..294657 Helicobacter pylori Gambia94/24 12360103 YP_005780031.1 CDS HPGAM_01520 NC_017371.1 294700 295980 D COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 294700..295980 Helicobacter pylori Gambia94/24 12360104 YP_005780032.1 CDS HPGAM_01525 NC_017371.1 296014 296667 D COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein 296014..296667 Helicobacter pylori Gambia94/24 12360105 YP_005780033.1 CDS HPGAM_01530 NC_017371.1 296660 297643 D hypothetical protein 296660..297643 Helicobacter pylori Gambia94/24 12360106 YP_005780034.1 CDS HPGAM_01535 NC_017371.1 297633 298166 D hypothetical protein 297633..298166 Helicobacter pylori Gambia94/24 12360107 YP_005780035.1 CDS HPGAM_01540 NC_017371.1 298258 298701 D hypothetical protein 298258..298701 Helicobacter pylori Gambia94/24 12360108 YP_005780036.1 CDS HPGAM_01545 NC_017371.1 298718 299116 D COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 298718..299116 Helicobacter pylori Gambia94/24 12360109 YP_005780037.1 CDS HPGAM_01550 NC_017371.1 299153 300448 D COG0457 FOG: TPR repeat; hypothetical protein 299153..300448 Helicobacter pylori Gambia94/24 12360110 YP_005780038.1 CDS HPGAM_01555 NC_017371.1 300436 300993 D hypothetical protein 300436..300993 Helicobacter pylori Gambia94/24 12360111 YP_005780039.1 CDS HPGAM_01560 NC_017371.1 301050 301304 D COG1145 Ferredoxin; ferredoxin 301050..301304 Helicobacter pylori Gambia94/24 12360112 YP_005780040.1 CDS HPGAM_01565 NC_017371.1 301314 302768 D COG0248 Exopolyphosphatase; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 301314..302768 Helicobacter pylori Gambia94/24 12360113 YP_005780041.1 CDS HPGAM_01570 NC_017371.1 302765 303775 D COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase-1 302765..303775 Helicobacter pylori Gambia94/24 12360114 YP_005780042.1 CDS HPGAM_01575 NC_017371.1 303772 304758 D COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 303772..304758 Helicobacter pylori Gambia94/24 12360115 YP_005780043.1 CDS tgt NC_017371.1 304990 306105 R COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase complement(304990..306105) Helicobacter pylori Gambia94/24 12360116 YP_005780044.1 CDS HPGAM_01585 NC_017371.1 306162 307598 D COG3400 Uncharacterized protein conserved in bacteria; hypothetical protein 306162..307598 Helicobacter pylori Gambia94/24 12360117 YP_005780045.1 CDS aroB NC_017371.1 307603 308634 D COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 307603..308634 Helicobacter pylori Gambia94/24 12360118 YP_005780046.1 CDS HPGAM_01595 NC_017371.1 308625 310196 D COG0668 Small-conductance mechanosensitive channel; hypothetical protein 308625..310196 Helicobacter pylori Gambia94/24 12360119 YP_005780047.1 CDS HPGAM_01600 NC_017371.1 310193 311449 D COG0621 2-methylthioadenine synthetase; hypothetical protein 310193..311449 Helicobacter pylori Gambia94/24 12360120 YP_005780048.1 CDS HPGAM_01605 NC_017371.1 311436 313088 D COG0465 ATP-dependent Zn proteases; ATP-dependent zinc metallopeptidase 311436..313088 Helicobacter pylori Gambia94/24 12360121 YP_005780049.1 CDS HPGAM_01610 NC_017371.1 313091 313609 D hypothetical protein 313091..313609 Helicobacter pylori Gambia94/24 12360122 YP_005780050.1 CDS HPGAM_01615 NC_017371.1 313622 314095 D hypothetical protein 313622..314095 Helicobacter pylori Gambia94/24 12360123 YP_005780051.1 CDS HPGAM_01620 NC_017371.1 314163 322868 D toxin-like outer membrane protein 314163..322868 Helicobacter pylori Gambia94/24 12360124 YP_005780052.1 CDS HPGAM_01625 NC_017371.1 322916 324133 D COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 322916..324133 Helicobacter pylori Gambia94/24 12360125 YP_005780053.1 CDS HPGAM_01630 NC_017371.1 324138 324440 D COG1605 Chorismate mutase; hypothetical protein 324138..324440 Helicobacter pylori Gambia94/24 12360126 YP_005780054.1 CDS HPGAM_01635 NC_017371.1 324453 325325 D COG4866 Uncharacterized conserved protein; hypothetical protein 324453..325325 Helicobacter pylori Gambia94/24 12360127 YP_005780055.1 CDS HPGAM_01640 NC_017371.1 325326 327029 D COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthetase 325326..327029 Helicobacter pylori Gambia94/24 12360128 YP_005780056.1 CDS amiE NC_017371.1 327157 328176 D COG0388 Predicted amidohydrolase; acylamide amidohydrolase 327157..328176 Helicobacter pylori Gambia94/24 12360129 YP_005780057.1 CDS HPGAM_01650 NC_017371.1 328346 328450 D hypothetical protein 328346..328450 Helicobacter pylori Gambia94/24 12360130 YP_005780058.1 CDS flgL NC_017371.1 328511 330997 R COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL complement(328511..330997) Helicobacter pylori Gambia94/24 12360131 YP_005780059.1 CDS rplU NC_017371.1 331239 331553 D COG0261 Ribosomal protein L21; 50S ribosomal protein L21 331239..331553 Helicobacter pylori Gambia94/24 12360132 YP_005780060.1 CDS rpmA NC_017371.1 331567 331833 D COG0211 Ribosomal protein L27; 50S ribosomal protein L27 331567..331833 Helicobacter pylori Gambia94/24 12360133 YP_005780061.1 CDS HPGAM_01670 NC_017371.1 331991 333598 D COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide ABC transporter periplasmic dipeptide-binding protein DppA 331991..333598 Helicobacter pylori Gambia94/24 12360134 YP_005780062.1 CDS HPGAM_01675 NC_017371.1 333609 334613 D COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide permease protein 333609..334613 Helicobacter pylori Gambia94/24 12360135 YP_005780063.1 CDS HPGAM_01680 NC_017371.1 334613 335470 D COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide permease protein 334613..335470 Helicobacter pylori Gambia94/24 12360136 YP_005780064.1 CDS HPGAM_01685 NC_017371.1 335482 336345 D COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; peptide ABC transporter ATP-binding protein 335482..336345 Helicobacter pylori Gambia94/24 12360137 YP_005780065.1 CDS HPGAM_01690 NC_017371.1 336342 337148 D COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide ABC transporter 336342..337148 Helicobacter pylori Gambia94/24 12360138 YP_005780066.1 CDS obgE NC_017371.1 337168 338250 D COG0536 Predicted GTPase; GTPase CgtA 337168..338250 Helicobacter pylori Gambia94/24 12360139 YP_005780067.1 CDS HPGAM_01700 NC_017371.1 338433 339428 D hypothetical protein 338433..339428 Helicobacter pylori Gambia94/24 12360140 YP_005780068.1 CDS HPGAM_01705 NC_017371.1 339692 340246 D hypothetical protein 339692..340246 Helicobacter pylori Gambia94/24 12360141 YP_005780069.1 CDS HPGAM_01710 NC_017371.1 340256 341548 D COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 340256..341548 Helicobacter pylori Gambia94/24 12360142 YP_005780070.1 CDS HPGAM_01715 NC_017371.1 341553 341816 D hypothetical protein 341553..341816 Helicobacter pylori Gambia94/24 12360143 YP_005780071.1 CDS HPGAM_01720 NC_017371.1 341832 342233 D hypothetical protein 341832..342233 Helicobacter pylori Gambia94/24 12360144 YP_005780072.1 CDS HPGAM_01725 NC_017371.1 342317 343201 D COG0388 Predicted amidohydrolase; hypothetical protein 342317..343201 Helicobacter pylori Gambia94/24 12360145 YP_005780073.1 CDS HPGAM_01730 NC_017371.1 343214 344095 D COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase 343214..344095 Helicobacter pylori Gambia94/24 12360146 YP_005780074.1 CDS HPGAM_01735 NC_017371.1 344141 344527 D hypothetical protein 344141..344527 Helicobacter pylori Gambia94/24 12360147 YP_005780075.1 CDS HPGAM_01740 NC_017371.1 344527 345492 D COG0523 Putative GTPases (G3E family); hypothetical protein 344527..345492 Helicobacter pylori Gambia94/24 12360148 YP_005780076.1 CDS HPGAM_01745 NC_017371.1 345498 346643 R COG0477 Permeases of the major facilitator superfamily; nitrite extrusion protein (narK) complement(345498..346643) Helicobacter pylori Gambia94/24 12360149 YP_005780077.1 CDS HPGAM_01750 NC_017371.1 346848 347357 R COG0842 ABC-type multidrug transport system, permease component; putative ABC transporter permease complement(346848..347357) Helicobacter pylori Gambia94/24 12360150 YP_005780078.1 CDS HPGAM_01755 NC_017371.1 347365 347604 R COG0842 ABC-type multidrug transport system, permease component; ABC transporter permease complement(347365..347604) Helicobacter pylori Gambia94/24 12360151 YP_005780079.1 CDS HPGAM_01760 NC_017371.1 347604 348305 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(347604..348305) Helicobacter pylori Gambia94/24 12360152 YP_005780080.1 CDS HPGAM_01765 NC_017371.1 348514 348690 D hypothetical protein 348514..348690 Helicobacter pylori Gambia94/24 12360153 YP_005780081.1 CDS HPGAM_01770 NC_017371.1 348905 349660 R COG0748 Putative heme iron utilization protein; putative heme iron utilization protein complement(348905..349660) Helicobacter pylori Gambia94/24 12360154 YP_005780082.1 CDS argS NC_017371.1 349771 351396 R COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase complement(349771..351396) Helicobacter pylori Gambia94/24 12360155 YP_005780083.1 CDS HPGAM_01780 NC_017371.1 351399 351644 R COG1826 Sec-independent protein secretion pathway components; Sec-independent protein translocase protein tatA/E-like protein complement(351399..351644) Helicobacter pylori Gambia94/24 12360156 YP_005780084.1 CDS gmk NC_017371.1 351716 352336 R COG0194 Guanylate kinase; guanylate kinase complement(351716..352336) Helicobacter pylori Gambia94/24 12360157 YP_005780085.1 CDS HPGAM_01790 NC_017371.1 352329 353897 R poly E-rich protein complement(352329..353897) Helicobacter pylori Gambia94/24 12360158 YP_005780086.1 CDS HPGAM_01795 NC_017371.1 354048 354590 D COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; nuclease NucT 354048..354590 Helicobacter pylori Gambia94/24 12360159 YP_005780087.1 CDS HPGAM_01800 NC_017371.1 354598 355335 R putative Outer membrane protein complement(354598..355335) Helicobacter pylori Gambia94/24 12360160 YP_005780088.1 CDS flgH NC_017371.1 355472 356185 D COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 355472..356185 Helicobacter pylori Gambia94/24 12360161 YP_005780089.1 CDS HPGAM_01810 NC_017371.1 356209 356898 D COG1083 CMP-N-acetylneuraminic acid synthetase; CMP-N-acetylneuraminic acid synthetase 356209..356898 Helicobacter pylori Gambia94/24 12360162 YP_005780090.1 CDS HPGAM_01815 NC_017371.1 356889 357755 D COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase; putative acylneuraminate cytidylyltransferase 356889..357755 Helicobacter pylori Gambia94/24 12360163 YP_005780091.1 CDS HPGAM_01820 NC_017371.1 357752 358294 D COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; flagellar biosynthesis protein G 357752..358294 Helicobacter pylori Gambia94/24 12360164 YP_005780092.1 CDS lpxK NC_017371.1 358227 359165 R COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase complement(358227..359165) Helicobacter pylori Gambia94/24 12360165 YP_005780093.1 CDS HPGAM_01830 NC_017371.1 359162 359944 R COG0171 NAD synthase; NAD synthetase complement(359162..359944) Helicobacter pylori Gambia94/24 12360166 YP_005780094.1 CDS HPGAM_01835 NC_017371.1 360193 361185 D COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 360193..361185 Helicobacter pylori Gambia94/24 12360168 YP_005780095.1 CDS HPGAM_01840 NC_017371.1 361210 362016 D COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor 361210..362016 Helicobacter pylori Gambia94/24 12360169 YP_005780096.1 CDS minE NC_017371.1 362013 362246 D COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 362013..362246 Helicobacter pylori Gambia94/24 12360170 YP_005780097.1 CDS HPGAM_01850 NC_017371.1 362253 363053 D COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing chain A (dprA) 362253..363053 Helicobacter pylori Gambia94/24 12360171 YP_005780098.1 CDS HPGAM_01855 NC_017371.1 363050 363454 D COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 363050..363454 Helicobacter pylori Gambia94/24 12360172 YP_005780099.1 CDS HPGAM_01860 NC_017371.1 363731 364306 D COG0790 FOG: TPR repeat, SEL1 subfamily; cysteine-rich protein H 363731..364306 Helicobacter pylori Gambia94/24 12360173 YP_005780100.1 CDS HPGAM_01865 NC_017371.1 364493 364831 D hypothetical protein 364493..364831 Helicobacter pylori Gambia94/24 12360174 YP_005780101.1 CDS HPGAM_01870 NC_017371.1 364815 365375 D hypothetical protein 364815..365375 Helicobacter pylori Gambia94/24 12360175 YP_005780102.1 CDS HPGAM_01875 NC_017371.1 365546 366427 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(365546..366427) Helicobacter pylori Gambia94/24 12360176 YP_005780103.1 CDS HPGAM_01880 NC_017371.1 366427 367977 R COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease complement(366427..367977) Helicobacter pylori Gambia94/24 12360177 YP_005780104.1 CDS pyrG NC_017371.1 367986 369602 R COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase complement(367986..369602) Helicobacter pylori Gambia94/24 12360178 YP_005780105.1 CDS HPGAM_01890 NC_017371.1 369860 370522 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 369860..370522 Helicobacter pylori Gambia94/24 12360179 YP_005780106.1 CDS fliF NC_017371.1 370566 372269 D COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 370566..372269 Helicobacter pylori Gambia94/24 12360180 YP_005780107.1 CDS fliG NC_017371.1 372286 373317 D COG1536 Flagellar motor switch protein; flagellar motor switch protein G 372286..373317 Helicobacter pylori Gambia94/24 12360181 YP_005780108.1 CDS fliH NC_017371.1 373310 374080 D COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 373310..374080 Helicobacter pylori Gambia94/24 12360182 YP_005780109.1 CDS HPGAM_01910 NC_017371.1 374083 375933 D COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 374083..375933 Helicobacter pylori Gambia94/24 12360183 YP_005780110.1 CDS HPGAM_01915 NC_017371.1 375930 377744 D COG0481 Membrane GTPase LepA; GTP-binding protein LepA 375930..377744 Helicobacter pylori Gambia94/24 12360184 YP_005780111.1 CDS HPGAM_01920 NC_017371.1 377759 378517 D COG0553 Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein 377759..378517 Helicobacter pylori Gambia94/24 12360185 YP_005780112.1 CDS HPGAM_01925 NC_017371.1 378520 378756 D hypothetical protein 378520..378756 Helicobacter pylori Gambia94/24 12360186 YP_005780113.1 CDS HPGAM_01930 NC_017371.1 378831 378965 D hypothetical protein 378831..378965 Helicobacter pylori Gambia94/24 12360187 YP_005780114.1 CDS HPGAM_01935 NC_017371.1 379268 380077 R COG4786 Flagellar basal body rod protein; flagellar basal-body rod protein complement(379268..380077) Helicobacter pylori Gambia94/24 12360188 YP_005780115.1 CDS HPGAM_01940 NC_017371.1 380132 381418 R COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate permease complement(380132..381418) Helicobacter pylori Gambia94/24 12360189 YP_005780116.1 CDS HPGAM_01945 NC_017371.1 381503 381628 D hypothetical protein 381503..381628 Helicobacter pylori Gambia94/24 12360190 YP_005780117.1 CDS HPGAM_01950 NC_017371.1 381805 384363 R COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein complement(381805..384363) Helicobacter pylori Gambia94/24 12360191 YP_005780118.1 CDS HPGAM_01955 NC_017371.1 384360 386696 R COG3893 Inactivated superfamily I helicase; hypothetical protein complement(384360..386696) Helicobacter pylori Gambia94/24 12360192 YP_005780119.1 CDS HPGAM_01960 NC_017371.1 386693 388618 R COG0021 Transketolase; transketolase complement(386693..388618) Helicobacter pylori Gambia94/24 12360193 YP_005780120.1 CDS HPGAM_01965 NC_017371.1 388665 389507 R COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase complement(388665..389507) Helicobacter pylori Gambia94/24 12360194 YP_005780121.1 CDS HPGAM_01970 NC_017371.1 389473 390180 R COG1189 Predicted rRNA methylase; putative hemolysin complement(389473..390180) Helicobacter pylori Gambia94/24 12360195 YP_005780122.1 CDS HPGAM_01975 NC_017371.1 390180 390695 R hypothetical protein complement(390180..390695) Helicobacter pylori Gambia94/24 12360196 YP_005780123.1 CDS pyrB NC_017371.1 390762 391685 D COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 390762..391685 Helicobacter pylori Gambia94/24 12360197 YP_005780124.1 CDS HPGAM_01985 NC_017371.1 391977 393416 D putative Outer membrane protein 391977..393416 Helicobacter pylori Gambia94/24 12360198 YP_005780125.1 CDS HPGAM_01990 NC_017371.1 393507 395162 D COG1132 ABC-type multidrug transport system, ATPase and permease components; multi-drug resistance protein 393507..395162 Helicobacter pylori Gambia94/24 12360199 YP_005780126.1 CDS HPGAM_01995 NC_017371.1 395156 395779 D hypothetical protein 395156..395779 Helicobacter pylori Gambia94/24 12360200 YP_005780127.1 CDS HPGAM_02000 NC_017371.1 395783 396352 D COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes; Holliday junction resolvase and Mrr protein 395783..396352 Helicobacter pylori Gambia94/24 12360201 YP_005780128.1 CDS HPGAM_02005 NC_017371.1 396485 397612 D COG1106 Predicted ATPases; hypothetical protein 396485..397612 Helicobacter pylori Gambia94/24 12360202 YP_005780129.1 CDS HPGAM_02010 NC_017371.1 397605 398321 D hypothetical protein 397605..398321 Helicobacter pylori Gambia94/24 12360203 YP_005780130.1 CDS HPGAM_02015 NC_017371.1 398378 399373 D COG3376 High-affinity nickel permease; high-affinity nickel-transport protein 398378..399373 Helicobacter pylori Gambia94/24 12360204 YP_005780131.1 CDS HPGAM_02020 NC_017371.1 399377 399898 R hypothetical protein complement(399377..399898) Helicobacter pylori Gambia94/24 12360205 YP_005780132.1 CDS HPGAM_02025 NC_017371.1 400034 401350 D hypothetical protein 400034..401350 Helicobacter pylori Gambia94/24 12360206 YP_005780133.1 CDS HPGAM_02030 NC_017371.1 401373 402188 R hypothetical protein complement(401373..402188) Helicobacter pylori Gambia94/24 12360207 YP_005780134.1 CDS HPGAM_02035 NC_017371.1 402446 402646 R COG2608 Copper chaperone; COP-associated protein complement(402446..402646) Helicobacter pylori Gambia94/24 12360208 YP_005780135.1 CDS HPGAM_02040 NC_017371.1 402647 404872 R COG2217 Cation transport ATPase; copper-transporting ATPase complement(402647..404872) Helicobacter pylori Gambia94/24 12360209 YP_005780136.1 CDS HPGAM_02045 NC_017371.1 404869 405582 R COG1183 Phosphatidylserine synthase; phosphatidylserine synthase complement(404869..405582) Helicobacter pylori Gambia94/24 12360210 YP_005780137.1 CDS HPGAM_02050 NC_017371.1 405572 405832 R hypothetical protein complement(405572..405832) Helicobacter pylori Gambia94/24 12360211 YP_005780138.1 CDS HPGAM_02055 NC_017371.1 405835 407733 R COG0465 ATP-dependent Zn proteases; ATP-dependent zinc metallopeptidase complement(405835..407733) Helicobacter pylori Gambia94/24 12360212 YP_005780139.1 CDS prmA NC_017371.1 407742 408731 R COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase complement(407742..408731) Helicobacter pylori Gambia94/24 12360213 YP_005780140.1 CDS HPGAM_02065 NC_017371.1 408732 409106 R COG0784 FOG: CheY-like receiver; Chemotactic response regulator, two-component system complement(408732..409106) Helicobacter pylori Gambia94/24 12360214 YP_005780141.1 CDS HPGAM_02070 NC_017371.1 409396 409998 D hypothetical protein 409396..409998 Helicobacter pylori Gambia94/24 12360215 YP_005780142.1 CDS HPGAM_02075 NC_017371.1 410144 410551 R hypothetical protein complement(410144..410551) Helicobacter pylori Gambia94/24 12360217 YP_005780143.1 CDS HPGAM_02080 NC_017371.1 410554 410796 R hypothetical protein complement(410554..410796) Helicobacter pylori Gambia94/24 12360218 YP_005780144.1 CDS gidB NC_017371.1 410790 411326 R COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB complement(410790..411326) Helicobacter pylori Gambia94/24 12360219 YP_005780145.1 CDS queA NC_017371.1 411323 412360 R COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(411323..412360) Helicobacter pylori Gambia94/24 12360220 YP_005780146.1 CDS HPGAM_02095 NC_017371.1 412361 413110 R COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase protein tatC-like protein complement(412361..413110) Helicobacter pylori Gambia94/24 12360221 YP_005780147.1 CDS HPGAM_02100 NC_017371.1 413103 413555 R COG1826 Sec-independent protein secretion pathway components; sec-independent translocase complement(413103..413555) Helicobacter pylori Gambia94/24 12360222 YP_005780148.1 CDS ruvB NC_017371.1 413622 414632 R COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB complement(413622..414632) Helicobacter pylori Gambia94/24 12360223 YP_005780149.1 CDS panB NC_017371.1 414633 415445 R COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(414633..415445) Helicobacter pylori Gambia94/24 12360224 YP_005780150.1 CDS HPGAM_02115 NC_017371.1 415592 416314 D hypothetical protein 415592..416314 Helicobacter pylori Gambia94/24 12360225 YP_005780151.1 CDS HPGAM_02120 NC_017371.1 416304 417161 D hypothetical protein 416304..417161 Helicobacter pylori Gambia94/24 12360226 YP_005780152.1 CDS HPGAM_02125 NC_017371.1 417173 418114 D hypothetical protein 417173..418114 Helicobacter pylori Gambia94/24 12360227 YP_005780153.1 CDS HPGAM_02130 NC_017371.1 418124 419446 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 418124..419446 Helicobacter pylori Gambia94/24 12360228 YP_005780154.1 CDS minC NC_017371.1 419449 420033 D COG0850 Septum formation inhibitor; septum formation inhibitor 419449..420033 Helicobacter pylori Gambia94/24 12360229 YP_005780155.1 CDS lpxC NC_017371.1 420030 420917 D COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 420030..420917 Helicobacter pylori Gambia94/24 12360230 YP_005780156.1 CDS HPGAM_02145 NC_017371.1 420939 421436 D COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 420939..421436 Helicobacter pylori Gambia94/24 12360231 YP_005780157.1 CDS HPGAM_02150 NC_017371.1 421490 422371 D COG0083 Homoserine kinase; homoserine kinase 421490..422371 Helicobacter pylori Gambia94/24 12360232 YP_005780158.1 CDS HPGAM_02155 NC_017371.1 422358 422612 D COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 422358..422612 Helicobacter pylori Gambia94/24 12360233 YP_005780159.1 CDS infB NC_017371.1 422609 425464 D COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 422609..425464 Helicobacter pylori Gambia94/24 12360234 YP_005780160.1 CDS rbfA NC_017371.1 425464 425799 D COG0858 Ribosome-binding factor A; ribosome-binding factor A 425464..425799 Helicobacter pylori Gambia94/24 12360235 YP_005780161.1 CDS HPGAM_02170 NC_017371.1 425792 426232 D COG0779 Uncharacterized protein conserved in bacteria; Ribosome maturation factor rimP 425792..426232 Helicobacter pylori Gambia94/24 12360236 YP_005780162.1 CDS HPGAM_02175 NC_017371.1 426394 427506 D COG1408 Predicted phosphohydrolases; hypothetical protein 426394..427506 Helicobacter pylori Gambia94/24 12360237 YP_005780163.1 CDS HPGAM_02180 NC_017371.1 427686 427799 D hypothetical protein 427686..427799 Helicobacter pylori Gambia94/24 12360238 YP_005780164.1 CDS HPGAM_02185 NC_017371.1 427859 428530 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 427859..428530 Helicobacter pylori Gambia94/24 12360239 YP_005780165.1 CDS HPGAM_02190 NC_017371.1 429322 430365 R COG2404 Predicted phosphohydrolase (DHH superfamily); hypothetical protein complement(429322..430365) Helicobacter pylori Gambia94/24 12360240 YP_005780166.1 CDS flhA NC_017371.1 430399 432600 R COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA complement(430399..432600) Helicobacter pylori Gambia94/24 12360241 YP_005780167.1 CDS rpsO NC_017371.1 432735 433007 D COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 432735..433007 Helicobacter pylori Gambia94/24 12360242 YP_005780168.1 CDS HPGAM_02205 NC_017371.1 433048 434352 D COG3307 Lipid A core - O-antigen ligase and related enzymes; hypothetical protein 433048..434352 Helicobacter pylori Gambia94/24 12360243 YP_005780169.1 CDS HPGAM_02210 NC_017371.1 434462 434974 D COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 434462..434974 Helicobacter pylori Gambia94/24 12360244 YP_005780170.1 CDS HPGAM_02215 NC_017371.1 434987 436060 D COG0006 Xaa-Pro aminopeptidase; X-Pro aminopeptidase 434987..436060 Helicobacter pylori Gambia94/24 12360245 YP_005780171.1 CDS HPGAM_02220 NC_017371.1 436057 436548 D COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 436057..436548 Helicobacter pylori Gambia94/24 12360246 YP_005780172.1 CDS flhF NC_017371.1 436545 437915 D COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF 436545..437915 Helicobacter pylori Gambia94/24 12360247 YP_005780173.1 CDS HPGAM_02230 NC_017371.1 437912 438796 D COG0455 ATPases involved in chromosome partitioning; hypothetical protein 437912..438796 Helicobacter pylori Gambia94/24 12360248 YP_005780174.1 CDS fliA NC_017371.1 439093 439860 D COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 439093..439860 Helicobacter pylori Gambia94/24 12360249 YP_005780175.1 CDS fliM NC_017371.1 439853 440917 D COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 439853..440917 Helicobacter pylori Gambia94/24 12360250 YP_005780176.1 CDS HPGAM_02245 NC_017371.1 440921 441778 D COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliY 440921..441778 Helicobacter pylori Gambia94/24 12360251 YP_005780177.1 CDS HPGAM_02250 NC_017371.1 441807 442343 D COG2731 Beta-galactosidase, beta subunit; hypothetical protein 441807..442343 Helicobacter pylori Gambia94/24 12360252 YP_005780178.1 CDS HPGAM_02255 NC_017371.1 442340 442843 D COG4731 Uncharacterized protein conserved in bacteria; hypothetical protein 442340..442843 Helicobacter pylori Gambia94/24 12360253 YP_005780179.1 CDS HPGAM_02260 NC_017371.1 442865 443317 R COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein complement(442865..443317) Helicobacter pylori Gambia94/24 12360254 YP_005780180.1 CDS HPGAM_02265 NC_017371.1 443477 444652 R COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA complement(443477..444652) Helicobacter pylori Gambia94/24 12360255 YP_005780181.1 CDS HPGAM_02270 NC_017371.1 444649 445020 R COG0789 Predicted transcriptional regulators; heat shock transcriptional regulator complement(444649..445020) Helicobacter pylori Gambia94/24 12360256 YP_005780182.1 CDS HPGAM_02275 NC_017371.1 445030 445896 R COG2214 DnaJ-class molecular chaperone; putative co-chaperone with DnaK complement(445030..445896) Helicobacter pylori Gambia94/24 12360257 YP_005780183.1 CDS HPGAM_02280 NC_017371.1 446064 447314 D hypothetical protein 446064..447314 Helicobacter pylori Gambia94/24 12360258 YP_005780184.1 CDS HPGAM_02285 NC_017371.1 447311 447427 R hypothetical protein complement(447311..447427) Helicobacter pylori Gambia94/24 12360259 YP_005780185.1 CDS HPGAM_02290 NC_017371.1 447552 448328 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); 5'-3' exonuclease complement(447552..448328) Helicobacter pylori Gambia94/24 12360260 YP_005780186.1 CDS HPGAM_02295 NC_017371.1 448644 449540 R COG0784 FOG: CheY-like receiver; response regulator complement(448644..449540) Helicobacter pylori Gambia94/24 12360261 YP_005780187.1 CDS ispDF NC_017371.1 449563 450783 R COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase complement(449563..450783) Helicobacter pylori Gambia94/24 12360262 YP_005780188.1 CDS HPGAM_02305 NC_017371.1 450805 452235 R COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; protease DO complement(450805..452235) Helicobacter pylori Gambia94/24 12360263 YP_005780189.1 CDS HPGAM_02310 NC_017371.1 452280 453707 R COG0833 Amino acid transporters; amino acid permease complement(452280..453707) Helicobacter pylori Gambia94/24 12360264 YP_005780190.1 CDS HPGAM_02315 NC_017371.1 453962 454501 R COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase complement(453962..454501) Helicobacter pylori Gambia94/24 12360265 YP_005780191.1 CDS HPGAM_02320 NC_017371.1 454498 455106 R hypothetical protein complement(454498..455106) Helicobacter pylori Gambia94/24 12360266 YP_005780192.1 CDS HPGAM_02325 NC_017371.1 455116 455904 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase complement(455116..455904) Helicobacter pylori Gambia94/24 12360267 YP_005780193.1 CDS HPGAM_02330 NC_017371.1 455901 456803 R COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase complement(455901..456803) Helicobacter pylori Gambia94/24 12360268 YP_005780194.1 CDS HPGAM_02335 NC_017371.1 456818 458152 R COG0612 Predicted Zn-dependent peptidases; putative zinc protease complement(456818..458152) Helicobacter pylori Gambia94/24 12360269 YP_005780195.1 CDS HPGAM_02340 NC_017371.1 458149 459204 R COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 complement(458149..459204) Helicobacter pylori Gambia94/24 12360270 YP_005780196.1 CDS HPGAM_02345 NC_017371.1 459243 461270 R COG0855 Polyphosphate kinase; polyphosphate kinase complement(459243..461270) Helicobacter pylori Gambia94/24 12360271 YP_005780197.1 CDS HPGAM_02350 NC_017371.1 461499 462743 R COG0732 Restriction endonuclease S subunits; Type I restriction/modification specificity protein complement(461499..462743) Helicobacter pylori Gambia94/24 12360273 YP_005780198.1 CDS HPGAM_02355 NC_017371.1 462736 464367 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(462736..464367) Helicobacter pylori Gambia94/24 12360274 YP_005780199.1 CDS HPGAM_02360 NC_017371.1 464360 467491 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(464360..467491) Helicobacter pylori Gambia94/24 12360275 YP_005780200.1 CDS HPGAM_02365 NC_017371.1 467539 469434 R COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein complement(467539..469434) Helicobacter pylori Gambia94/24 12360276 YP_005780201.1 CDS HPGAM_02370 NC_017371.1 469459 470226 R hypothetical protein complement(469459..470226) Helicobacter pylori Gambia94/24 12360277 YP_005780202.1 CDS HPGAM_02375 NC_017371.1 470236 470550 R hypothetical protein complement(470236..470550) Helicobacter pylori Gambia94/24 12360278 YP_005780203.1 CDS HPGAM_02380 NC_017371.1 470552 472039 R COG2048 Heterodisulfide reductase, subunit B; hypothetical protein complement(470552..472039) Helicobacter pylori Gambia94/24 12360279 YP_005780204.1 CDS HPGAM_02385 NC_017371.1 472051 472539 R hypothetical protein complement(472051..472539) Helicobacter pylori Gambia94/24 12360280 YP_005780205.1 CDS HPGAM_02390 NC_017371.1 472524 474260 R COG1164 Oligoendopeptidase F; oligoendopeptidase F complement(472524..474260) Helicobacter pylori Gambia94/24 12360281 YP_005780206.1 CDS HPGAM_02395 NC_017371.1 474358 475608 R COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein complement(474358..475608) Helicobacter pylori Gambia94/24 12360282 YP_005780207.1 CDS HPGAM_02400 NC_017371.1 475924 476484 R hypothetical protein complement(475924..476484) Helicobacter pylori Gambia94/24 12360283 YP_005780208.1 CDS HPGAM_02405 NC_017371.1 476711 477451 D COG0725 ABC-type molybdate transport system, periplasmic component; molybdate ABC transporter periplasmic-binding protein 476711..477451 Helicobacter pylori Gambia94/24 12360284 YP_005780209.1 CDS HPGAM_02410 NC_017371.1 477473 478147 D COG4149 ABC-type molybdate transport system, permease component; molybdenum ABC transporter ModB 477473..478147 Helicobacter pylori Gambia94/24 12360285 YP_005780210.1 CDS HPGAM_02415 NC_017371.1 478144 478941 D COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; molybdenum ABC transporter ModD 478144..478941 Helicobacter pylori Gambia94/24 12360286 YP_005780211.1 CDS gltX NC_017371.1 479113 480504 R COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase complement(479113..480504) Helicobacter pylori Gambia94/24 12360287 YP_005780212.1 CDS HPGAM_02425 NC_017371.1 480623 481729 D putative Outer membrane protein 480623..481729 Helicobacter pylori Gambia94/24 12360288 YP_005780213.1 CDS HPGAM_02430 NC_017371.1 483340 484188 D COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein 483340..484188 Helicobacter pylori Gambia94/24 12360289 YP_005780214.1 CDS HPGAM_02435 NC_017371.1 484234 486033 D COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein TypA 484234..486033 Helicobacter pylori Gambia94/24 12360290 YP_005780215.1 CDS HPGAM_02440 NC_017371.1 486049 486978 D COG0338 Site-specific DNA methylase; putative type II DNA modification enzyme (methyltransferase) 486049..486978 Helicobacter pylori Gambia94/24 12360291 YP_005780216.1 CDS HPGAM_02445 NC_017371.1 486981 487466 D type II restriction endonuclease 486981..487466 Helicobacter pylori Gambia94/24 12360292 YP_005780217.1 CDS HPGAM_02450 NC_017371.1 487693 488748 D COG0270 Site-specific DNA methylase; type II DNA modification (methyltransferase) 487693..488748 Helicobacter pylori Gambia94/24 12360293 YP_005780218.1 CDS HPGAM_02465 NC_017371.1 489732 490676 R COG0753 Catalase; catalase-like protein complement(489732..490676) Helicobacter pylori Gambia94/24 12360294 YP_005780219.1 CDS HPGAM_02470 NC_017371.1 490956 492542 D hypothetical protein 490956..492542 Helicobacter pylori Gambia94/24 12360295 YP_005780220.1 CDS HPGAM_02475 NC_017371.1 492614 494011 D putative Outer membrane protein 492614..494011 Helicobacter pylori Gambia94/24 12360296 YP_005780221.1 CDS HPGAM_02480 NC_017371.1 494237 494362 R hypothetical protein complement(494237..494362) Helicobacter pylori Gambia94/24 12360297 YP_005780222.1 CDS HPGAM_02485 NC_017371.1 494375 494611 R hypothetical protein complement(494375..494611) Helicobacter pylori Gambia94/24 12360298 YP_005780223.1 CDS HPGAM_02490 NC_017371.1 494826 497351 D hypothetical protein 494826..497351 Helicobacter pylori Gambia94/24 12360299 YP_005780224.1 CDS HPGAM_02495 NC_017371.1 497355 497780 D hypothetical protein 497355..497780 Helicobacter pylori Gambia94/24 12360300 YP_005780225.1 CDS HPGAM_02500 NC_017371.1 497777 498322 D hypothetical protein 497777..498322 Helicobacter pylori Gambia94/24 12360301 YP_005780226.1 CDS HPGAM_02505 NC_017371.1 498562 499698 R COG1226 Kef-type K+ transport systems, predicted NAD-binding component; putative potassium channel protein complement(498562..499698) Helicobacter pylori Gambia94/24 12360302 YP_005780227.1 CDS rpmB NC_017371.1 499885 500073 R COG0227 Ribosomal protein L28; 50S ribosomal protein L28 complement(499885..500073) Helicobacter pylori Gambia94/24 12360303 YP_005780228.1 CDS HPGAM_02515 NC_017371.1 500173 501021 R HpaA-like protein complement(500173..501021) Helicobacter pylori Gambia94/24 12360304 YP_005780229.1 CDS mraY NC_017371.1 501143 502204 D COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 501143..502204 Helicobacter pylori Gambia94/24 12360305 YP_005780230.1 CDS murD NC_017371.1 502206 503474 D COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 502206..503474 Helicobacter pylori Gambia94/24 12360306 YP_005780231.1 CDS HPGAM_02530 NC_017371.1 503471 503731 R hypothetical protein complement(503471..503731) Helicobacter pylori Gambia94/24 12360307 YP_005780232.1 CDS HPGAM_02535 NC_017371.1 503721 504122 R COG0824 Predicted thioesterase; putative thioesterase complement(503721..504122) Helicobacter pylori Gambia94/24 12360308 YP_005780233.1 CDS HPGAM_02540 NC_017371.1 504354 505682 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 504354..505682 Helicobacter pylori Gambia94/24 12360309 YP_005780234.1 CDS HPGAM_02545 NC_017371.1 505693 507021 D COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 505693..507021 Helicobacter pylori Gambia94/24 12360310 YP_005780235.1 CDS HPGAM_02560 NC_017371.1 508158 509282 D COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 508158..509282 Helicobacter pylori Gambia94/24 12360311 YP_005780236.1 CDS gyrB NC_017371.1 509295 511616 D COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 509295..511616 Helicobacter pylori Gambia94/24 12360312 YP_005780237.1 CDS HPGAM_02570 NC_017371.1 511658 512650 D hypothetical protein 511658..512650 Helicobacter pylori Gambia94/24 12360313 YP_005780238.1 CDS HPGAM_02575 NC_017371.1 512637 513383 D hypothetical protein 512637..513383 Helicobacter pylori Gambia94/24 12360314 YP_005780239.1 CDS HPGAM_02580 NC_017371.1 513596 514816 D COG0739 Membrane proteins related to metalloendopeptidases; putative Outer membrane protein 513596..514816 Helicobacter pylori Gambia94/24 12360315 YP_005780240.1 CDS HPGAM_02585 NC_017371.1 514816 515454 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 514816..515454 Helicobacter pylori Gambia94/24 12360316 YP_005780241.1 CDS HPGAM_02590 NC_017371.1 515447 516817 D hypothetical protein 515447..516817 Helicobacter pylori Gambia94/24 12360317 YP_005780242.1 CDS HPGAM_02595 NC_017371.1 516822 518201 D COG0277 FAD/FMN-containing dehydrogenases; putative glycolate oxidase 516822..518201 Helicobacter pylori Gambia94/24 12360318 YP_005780243.1 CDS HPGAM_02600 NC_017371.1 518224 518988 D COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 518224..518988 Helicobacter pylori Gambia94/24 12360319 YP_005780244.1 CDS HPGAM_02605 NC_017371.1 519401 519589 D urease-enhancing factor 519401..519589 Helicobacter pylori Gambia94/24 12360320 YP_005780245.1 CDS HPGAM_02610 NC_017371.1 519681 519779 R hypothetical protein complement(519681..519779) Helicobacter pylori Gambia94/24 12360321 YP_005780246.1 CDS HPGAM_02615 NC_017371.1 520309 521754 R COG0174 Glutamine synthetase; glutamine synthetase complement(520309..521754) Helicobacter pylori Gambia94/24 12360322 YP_005780247.1 CDS HPGAM_02620 NC_017371.1 521891 523999 D COG1479 Uncharacterized conserved protein; hypothetical protein 521891..523999 Helicobacter pylori Gambia94/24 12360323 YP_005780248.1 CDS rplI NC_017371.1 524062 524511 D COG0359 Ribosomal protein L9; 50S ribosomal protein L9 524062..524511 Helicobacter pylori Gambia94/24 12360324 YP_005780249.1 CDS HPGAM_02630 NC_017371.1 524515 525057 D COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 524515..525057 Helicobacter pylori Gambia94/24 12360325 YP_005780250.1 CDS hslU NC_017371.1 525057 526388 D COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 525057..526388 Helicobacter pylori Gambia94/24 12360326 YP_005780251.1 CDS era NC_017371.1 526388 527293 D COG1159 GTPase; GTPase Era 526388..527293 Helicobacter pylori Gambia94/24 12360327 YP_005780252.1 CDS HPGAM_02645 NC_017371.1 527290 528282 D COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 527290..528282 Helicobacter pylori Gambia94/24 12360328 YP_005780253.1 CDS HPGAM_02650 NC_017371.1 528360 529190 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(528360..529190) Helicobacter pylori Gambia94/24 12360329 YP_005780254.1 CDS HPGAM_02655 NC_017371.1 529531 529878 D putative cag island protein 529531..529878 Helicobacter pylori Gambia94/24 12360330 YP_005780255.1 CDS HPGAM_02660 NC_017371.1 530021 530680 D COG0551 Zn-finger domain associated with topoisomerase type I; cag island protein 530021..530680 Helicobacter pylori Gambia94/24 12360331 YP_005780256.1 CDS HPGAM_02665 NC_017371.1 530673 532118 D cag island protein 530673..532118 Helicobacter pylori Gambia94/24 12360332 YP_005780257.1 CDS HPGAM_02670 NC_017371.1 532128 532637 D cag pathogenicity island protein (cag4) 532128..532637 Helicobacter pylori Gambia94/24 12360333 YP_005780258.1 CDS HPGAM_02675 NC_017371.1 532950 533051 D hypothetical protein 532950..533051 Helicobacter pylori Gambia94/24 12360334 YP_005780259.1 CDS HPGAM_02680 NC_017371.1 533116 535362 R COG3505 Type IV secretory pathway, VirD4 components; CAG pathogenicity island protein 5 complement(533116..535362) Helicobacter pylori Gambia94/24 12360335 YP_005780260.1 CDS HPGAM_02685 NC_017371.1 535371 536363 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; cag island protein, DNA transfer protein complement(535371..536363) Helicobacter pylori Gambia94/24 12360336 YP_005780261.1 CDS HPGAM_02690 NC_017371.1 536368 536967 R cag pathogenicity island protein (cag6) complement(536368..536967) Helicobacter pylori Gambia94/24 12360337 YP_005780262.1 CDS HPGAM_02695 NC_017371.1 537102 542918 R COG2948 Type IV secretory pathway, VirB10 components; cag pathogenicity island protein Y VirB10-like protein complement(537102..542918) Helicobacter pylori Gambia94/24 12360338 YP_005780263.1 CDS HPGAM_02700 NC_017371.1 542933 544498 R COG3504 Type IV secretory pathway, VirB9 components; cag pathogenicity island protein X complement(542933..544498) Helicobacter pylori Gambia94/24 12360339 YP_005780264.1 CDS HPGAM_02705 NC_017371.1 544551 546158 R cag pathogenicity island protein W complement(544551..546158) Helicobacter pylori Gambia94/24 12360340 YP_005780265.1 CDS HPGAM_02710 NC_017371.1 546163 546921 R COG3736 Type IV secretory pathway, component VirB8; cag pathogenicity island protein V complement(546163..546921) Helicobacter pylori Gambia94/24 12360341 YP_005780266.1 CDS HPGAM_02715 NC_017371.1 547301 547957 D cag island protein 547301..547957 Helicobacter pylori Gambia94/24 12360342 YP_005780267.1 CDS HPGAM_02720 NC_017371.1 547993 548835 D CAG pathogenicity island protein T 547993..548835 Helicobacter pylori Gambia94/24 12360343 YP_005780268.1 CDS HPGAM_02725 NC_017371.1 549037 549630 R CAG pathogenicity island protein S complement(549037..549630) Helicobacter pylori Gambia94/24 12360344 YP_005780269.1 CDS HPGAM_02730 NC_017371.1 549803 549922 R hypothetical protein complement(549803..549922) Helicobacter pylori Gambia94/24 12360345 YP_005780270.1 CDS HPGAM_02735 NC_017371.1 551828 552958 D cag island protein 551828..552958 Helicobacter pylori Gambia94/24 12360346 YP_005780271.1 CDS HPGAM_02740 NC_017371.1 552973 553893 D cag pathogenicity island protein (cagN, cag17) 552973..553893 Helicobacter pylori Gambia94/24 12360347 YP_005780272.1 CDS HPGAM_02745 NC_017371.1 553975 554688 R cag pathogenicity island protein L complement(553975..554688) Helicobacter pylori Gambia94/24 12360348 YP_005780273.1 CDS HPGAM_02750 NC_017371.1 554685 555830 R cag pathogenicity island protein I complement(554685..555830) Helicobacter pylori Gambia94/24 12360349 YP_005780274.1 CDS HPGAM_02755 NC_017371.1 555841 556953 R COG0249 Mismatch repair ATPase (MutS family); cag island protein complement(555841..556953) Helicobacter pylori Gambia94/24 12360350 YP_005780275.1 CDS HPGAM_02760 NC_017371.1 556969 557397 R cag island protein complement(556969..557397) Helicobacter pylori Gambia94/24 12360351 YP_005780276.1 CDS HPGAM_02765 NC_017371.1 557452 558258 R cag island protein complement(557452..558258) Helicobacter pylori Gambia94/24 12360352 YP_005780277.1 CDS HPGAM_02770 NC_017371.1 558260 561211 R COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein complement(558260..561211) Helicobacter pylori Gambia94/24 12360353 YP_005780278.1 CDS HPGAM_02775 NC_017371.1 561220 561843 R cag pathogenicity island protein D complement(561220..561843) Helicobacter pylori Gambia94/24 12360354 YP_005780279.1 CDS HPGAM_02780 NC_017371.1 561845 562192 R cag pathogenicity island protein (cagC, cag25) complement(561845..562192) Helicobacter pylori Gambia94/24 12360355 YP_005780280.1 CDS HPGAM_02785 NC_017371.1 562335 562562 R cag pathogenicity island protein B complement(562335..562562) Helicobacter pylori Gambia94/24 12360356 YP_005780281.1 CDS HPGAM_02790 NC_017371.1 562594 562740 R hypothetical protein complement(562594..562740) Helicobacter pylori Gambia94/24 12360357 YP_005780282.1 CDS HPGAM_02795 NC_017371.1 563007 566693 D COG0419 ATPase involved in DNA repair; cytotoxin-associated protein A 563007..566693 Helicobacter pylori Gambia94/24 12360358 YP_005780283.1 CDS HPGAM_02800 NC_017371.1 566789 566920 D hypothetical protein 566789..566920 Helicobacter pylori Gambia94/24 12360359 YP_005780284.1 CDS HPGAM_02805 NC_017371.1 567070 567333 D COG1112 Superfamily I DNA and RNA helicases and helicase subunits; regulator of nonsense transcripts 1 567070..567333 Helicobacter pylori Gambia94/24 12360360 YP_005780285.1 CDS HPGAM_02810 NC_017371.1 567496 568263 R COG0796 Glutamate racemase; glutamate racemase complement(567496..568263) Helicobacter pylori Gambia94/24 12360361 YP_005780286.1 CDS rho NC_017371.1 568303 569619 R COG1158 Transcription termination factor; transcription termination factor Rho complement(568303..569619) Helicobacter pylori Gambia94/24 12360362 YP_005780287.1 CDS rpmE NC_017371.1 569884 570087 D COG0254 Ribosomal protein L31; 50S ribosomal protein L31 569884..570087 Helicobacter pylori Gambia94/24 12360363 YP_005780288.1 CDS HPGAM_02835 NC_017371.1 570994 571677 D COG0566 rRNA methylases; RNA methyltransferase 570994..571677 Helicobacter pylori Gambia94/24 12360364 YP_005780289.1 CDS HPGAM_02840 NC_017371.1 571690 572655 D hypothetical protein 571690..572655 Helicobacter pylori Gambia94/24 12360365 YP_005780290.1 CDS HPGAM_02845 NC_017371.1 572652 573473 D COG1217 Predicted membrane GTPase involved in stress response; hypothetical protein 572652..573473 Helicobacter pylori Gambia94/24 12360366 YP_005780291.1 CDS HPGAM_02850 NC_017371.1 573544 573981 R hypothetical protein complement(573544..573981) Helicobacter pylori Gambia94/24 12360367 YP_005780292.1 CDS HPGAM_02855 NC_017371.1 574241 574384 D hypothetical protein 574241..574384 Helicobacter pylori Gambia94/24 12360368 YP_005780293.1 CDS HPGAM_02860 NC_017371.1 574458 575396 R COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha complement(574458..575396) Helicobacter pylori Gambia94/24 12360369 YP_005780294.1 CDS HPGAM_02865 NC_017371.1 575418 576656 R COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II complement(575418..576656) Helicobacter pylori Gambia94/24 12360370 YP_005780295.1 CDS acpP NC_017371.1 576761 576997 R COG0236 Acyl carrier protein; acyl carrier protein complement(576761..576997) Helicobacter pylori Gambia94/24 12360371 YP_005780296.1 CDS fabG NC_017371.1 577222 577965 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase complement(577222..577965) Helicobacter pylori Gambia94/24 12360372 YP_005780297.1 CDS rpsU NC_017371.1 578004 578216 R COG0828 Ribosomal protein S21; 30S ribosomal protein S21 complement(578004..578216) Helicobacter pylori Gambia94/24 12360373 YP_005780298.1 CDS HPGAM_02885 NC_017371.1 578317 579567 R hypothetical protein complement(578317..579567) Helicobacter pylori Gambia94/24 12360374 YP_005780299.1 CDS HPGAM_02890 NC_017371.1 579452 579658 D hypothetical protein 579452..579658 Helicobacter pylori Gambia94/24 12360375 YP_005780300.1 CDS HPGAM_02895 NC_017371.1 579741 579986 D hypothetical protein 579741..579986 Helicobacter pylori Gambia94/24 12360376 YP_005780301.1 CDS HPGAM_02900 NC_017371.1 580014 580661 R COG3059 Predicted membrane protein; hypothetical protein complement(580014..580661) Helicobacter pylori Gambia94/24 12360377 YP_005780302.1 CDS dapF NC_017371.1 580774 581592 R COG0253 Diaminopimelate epimerase; diaminopimelate epimerase complement(580774..581592) Helicobacter pylori Gambia94/24 12360378 YP_005780303.1 CDS HPGAM_02910 NC_017371.1 581707 582756 D COG0628 Predicted permease; hypothetical protein 581707..582756 Helicobacter pylori Gambia94/24 12360379 YP_005780304.1 CDS HPGAM_02915 NC_017371.1 582750 582875 D hypothetical protein 582750..582875 Helicobacter pylori Gambia94/24 12360380 YP_005780305.1 CDS HPGAM_02920 NC_017371.1 583123 583245 D hypothetical protein 583123..583245 Helicobacter pylori Gambia94/24 12360381 YP_005780306.1 CDS HPGAM_02925 NC_017371.1 583461 584333 R COG0535 Predicted Fe-S oxidoreductases; hypothetical protein complement(583461..584333) Helicobacter pylori Gambia94/24 12360382 YP_005780307.1 CDS HPGAM_02930 NC_017371.1 584348 585448 R COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF complement(584348..585448) Helicobacter pylori Gambia94/24 12360383 YP_005780308.1 CDS HPGAM_02935 NC_017371.1 585450 586940 R COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A complement(585450..586940) Helicobacter pylori Gambia94/24 12360384 YP_005780309.1 CDS HPGAM_02940 NC_017371.1 586988 587566 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(586988..587566) Helicobacter pylori Gambia94/24 12360385 YP_005780310.1 CDS HPGAM_02945 NC_017371.1 587581 588120 R COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase complement(587581..588120) Helicobacter pylori Gambia94/24 12360386 YP_005780311.1 CDS HPGAM_02950 NC_017371.1 588178 588510 R hypothetical protein complement(588178..588510) Helicobacter pylori Gambia94/24 12360387 YP_005780312.1 CDS HPGAM_02955 NC_017371.1 588561 589016 R COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B complement(588561..589016) Helicobacter pylori Gambia94/24 12360388 YP_005780313.1 CDS HPGAM_02960 NC_017371.1 589037 589735 R COG1994 Zn-dependent proteases; hypothetical protein complement(589037..589735) Helicobacter pylori Gambia94/24 12360389 YP_005780314.1 CDS HPGAM_02965 NC_017371.1 589744 590616 R COG0681 Signal peptidase I; signal peptidase I complement(589744..590616) Helicobacter pylori Gambia94/24 12360390 YP_005780315.1 CDS HPGAM_02970 NC_017371.1 590617 591489 R COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase complement(590617..591489) Helicobacter pylori Gambia94/24 12360391 YP_005780316.1 CDS HPGAM_02975 NC_017371.1 591574 593625 R COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; hypothetical protein complement(591574..593625) Helicobacter pylori Gambia94/24 12360392 YP_005780317.1 CDS HPGAM_02980 NC_017371.1 593631 594185 R hypothetical protein complement(593631..594185) Helicobacter pylori Gambia94/24 12360393 YP_005780318.1 CDS HPGAM_02985 NC_017371.1 594192 595214 R COG4692 Predicted neuraminidase (sialidase); hypothetical protein complement(594192..595214) Helicobacter pylori Gambia94/24 12360394 YP_005780319.1 CDS HPGAM_02990 NC_017371.1 595287 596306 R COG0418 Dihydroorotase; dihydroorotase complement(595287..596306) Helicobacter pylori Gambia94/24 12360395 YP_005780320.1 CDS HPGAM_02995 NC_017371.1 596311 597264 R COG0810 Periplasmic protein TonB, links inner and outer membranes; hypothetical protein complement(596311..597264) Helicobacter pylori Gambia94/24 12360396 YP_005780321.1 CDS HPGAM_03000 NC_017371.1 597248 598114 R hypothetical protein complement(597248..598114) Helicobacter pylori Gambia94/24 12360397 YP_005780322.1 CDS HPGAM_03005 NC_017371.1 598126 598497 R COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein complement(598126..598497) Helicobacter pylori Gambia94/24 12360398 YP_005780323.1 CDS HPGAM_03010 NC_017371.1 598579 599223 R COG0177 Predicted EndoIII-related endonuclease; endonuclease III complement(598579..599223) Helicobacter pylori Gambia94/24 12360399 YP_005780324.1 CDS HPGAM_03015 NC_017371.1 599220 599456 R COG1918 Fe2+ transport system protein A; ferrous iron transport protein A complement(599220..599456) Helicobacter pylori Gambia94/24 12360400 YP_005780325.1 CDS HPGAM_03020 NC_017371.1 599453 602392 R hypothetical protein complement(599453..602392) Helicobacter pylori Gambia94/24 12360401 YP_005780326.1 CDS HPGAM_03025 NC_017371.1 602310 603299 D COG1559 Predicted periplasmic solute-binding protein; hypothetical protein 602310..603299 Helicobacter pylori Gambia94/24 12360402 YP_005780327.1 CDS oorD NC_017371.1 603484 603825 D COG1146 Ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 603484..603825 Helicobacter pylori Gambia94/24 12360403 YP_005780328.1 CDS oorA NC_017371.1 603825 604952 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 603825..604952 Helicobacter pylori Gambia94/24 12360404 YP_005780329.1 CDS oorB NC_017371.1 604954 605775 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 604954..605775 Helicobacter pylori Gambia94/24 12360405 YP_005780330.1 CDS oorC NC_017371.1 605775 606329 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 605775..606329 Helicobacter pylori Gambia94/24 12360406 YP_005780331.1 CDS HPGAM_03050 NC_017371.1 606441 608216 D COG5610 Predicted hydrolase (HAD superfamily); hypothetical protein 606441..608216 Helicobacter pylori Gambia94/24 12360407 YP_005780332.1 CDS HPGAM_03055 NC_017371.1 608374 608538 D hypothetical protein 608374..608538 Helicobacter pylori Gambia94/24 12360408 YP_005780333.1 CDS HPGAM_03060 NC_017371.1 608548 610020 D COG1495 Disulfide bond formation protein DsbB; hypothetical protein 608548..610020 Helicobacter pylori Gambia94/24 12360409 YP_005780334.1 CDS HPGAM_03065 NC_017371.1 610495 611073 D COG0768 Cell division protein FtsI/penicillin-binding protein 2; tumor necrosis factor alpha-inducing protein 610495..611073 Helicobacter pylori Gambia94/24 12360410 YP_005780335.1 CDS HPGAM_03070 NC_017371.1 611076 613058 R COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein complement(611076..613058) Helicobacter pylori Gambia94/24 12360411 YP_005780336.1 CDS HPGAM_03075 NC_017371.1 613058 614179 R COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase complement(613058..614179) Helicobacter pylori Gambia94/24 12360412 YP_005780337.1 CDS HPGAM_03080 NC_017371.1 614202 615503 R COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein (MCP) complement(614202..615503) Helicobacter pylori Gambia94/24 12360413 YP_005780338.1 CDS HPGAM_03095 NC_017371.1 616159 616521 R hypothetical protein complement(616159..616521) Helicobacter pylori Gambia94/24 12360414 YP_005780339.1 CDS HPGAM_03100 NC_017371.1 616732 618264 D COG1344 Flagellin and related hook-associated proteins; flagellin A 616732..618264 Helicobacter pylori Gambia94/24 12360415 YP_005780340.1 CDS HPGAM_03105 NC_017371.1 618382 619038 D COG2231 Uncharacterized protein related to Endonuclease III; 3-methyladenine DNA glycosylase 618382..619038 Helicobacter pylori Gambia94/24 12360416 YP_005780341.1 CDS HPGAM_03110 NC_017371.1 619035 619652 D hypothetical protein 619035..619652 Helicobacter pylori Gambia94/24 12360417 YP_005780342.1 CDS hemE NC_017371.1 619721 620740 D COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 619721..620740 Helicobacter pylori Gambia94/24 12360418 YP_005780343.1 CDS HPGAM_03120 NC_017371.1 620750 622183 D COG1538 Outer membrane protein; outer-membrane protein of the hefABC efflux system 620750..622183 Helicobacter pylori Gambia94/24 12360419 YP_005780344.1 CDS HPGAM_03125 NC_017371.1 622194 622898 D COG0845 Membrane-fusion protein; hypothetical protein 622194..622898 Helicobacter pylori Gambia94/24 12360420 YP_005780345.1 CDS HPGAM_03130 NC_017371.1 622911 625997 D COG0841 Cation/multidrug efflux pump; putative efflux transporter 622911..625997 Helicobacter pylori Gambia94/24 12360421 YP_005780346.1 CDS HPGAM_03135 NC_017371.1 625994 626563 D COG0015 Adenylosuccinate lyase; hypothetical protein 625994..626563 Helicobacter pylori Gambia94/24 12360422 YP_005780347.1 CDS HPGAM_03140 NC_017371.1 626727 636314 D putative vacuolating cytotoxin (VacA)-like protein 626727..636314 Helicobacter pylori Gambia94/24 12360423 YP_005780348.1 CDS HPGAM_03145 NC_017371.1 636379 636888 R COG0842 ABC-type multidrug transport system, permease component; putative ABC transporter permease complement(636379..636888) Helicobacter pylori Gambia94/24 12360424 YP_005780349.1 CDS HPGAM_03150 NC_017371.1 636896 637135 R COG0842 ABC-type multidrug transport system, permease component; ABC transporter permease complement(636896..637135) Helicobacter pylori Gambia94/24 12360425 YP_005780350.1 CDS HPGAM_03155 NC_017371.1 637135 637836 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(637135..637836) Helicobacter pylori Gambia94/24 12360426 YP_005780351.1 CDS HPGAM_03160 NC_017371.1 638163 638495 R hypothetical protein complement(638163..638495) Helicobacter pylori Gambia94/24 12360427 YP_005780352.1 CDS ligA NC_017371.1 638620 640590 R COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA complement(638620..640590) Helicobacter pylori Gambia94/24 12360428 YP_005780353.1 CDS HPGAM_03170 NC_017371.1 640662 641603 D COG0835 Chemotaxis signal transduction protein; Chemotaxis protein 640662..641603 Helicobacter pylori Gambia94/24 12360429 YP_005780354.1 CDS aspS NC_017371.1 641638 643377 D COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 641638..643377 Helicobacter pylori Gambia94/24 12360430 YP_005780355.1 CDS adk NC_017371.1 643389 643964 D COG0563 Adenylate kinase and related kinases; adenylate kinase 643389..643964 Helicobacter pylori Gambia94/24 12360431 YP_005780356.1 CDS HPGAM_03185 NC_017371.1 643989 644987 D COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 643989..644987 Helicobacter pylori Gambia94/24 12360432 YP_005780357.1 CDS HPGAM_03190 NC_017371.1 645045 646382 D COG3306 Glycosyltransferase involved in LPS biosynthesis; family 25 glycosyl transferase 645045..646382 Helicobacter pylori Gambia94/24 12360433 YP_005780358.1 CDS HPGAM_03195 NC_017371.1 646434 646955 D COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 646434..646955 Helicobacter pylori Gambia94/24 12360434 YP_005780359.1 CDS HPGAM_03200 NC_017371.1 647093 649333 R COG1193 Mismatch repair ATPase (MutS family); recombination and DNA strand exchange inhibitor protein complement(647093..649333) Helicobacter pylori Gambia94/24 12360435 YP_005780360.1 CDS HPGAM_03205 NC_017371.1 649349 649711 R hypothetical protein complement(649349..649711) Helicobacter pylori Gambia94/24 12360436 YP_005780361.1 CDS murC NC_017371.1 649711 651060 R COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase complement(649711..651060) Helicobacter pylori Gambia94/24 12360437 YP_005780362.1 CDS HPGAM_03215 NC_017371.1 651053 652180 R COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein complement(651053..652180) Helicobacter pylori Gambia94/24 12360438 YP_005780363.1 CDS ispG NC_017371.1 652333 653412 D COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 652333..653412 Helicobacter pylori Gambia94/24 12360439 YP_005780364.1 CDS HPGAM_03225 NC_017371.1 653415 654620 D COG2171 Tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 653415..654620 Helicobacter pylori Gambia94/24 12360440 YP_005780365.1 CDS HPGAM_03230 NC_017371.1 654632 655690 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 654632..655690 Helicobacter pylori Gambia94/24 12360441 YP_005780366.1 CDS HPGAM_03235 NC_017371.1 655928 657973 D COG1479 Uncharacterized conserved protein; hypothetical protein 655928..657973 Helicobacter pylori Gambia94/24 12360442 YP_005780367.1 CDS HPGAM_03240 NC_017371.1 658022 658606 R COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); hypothetical protein complement(658022..658606) Helicobacter pylori Gambia94/24 12360443 YP_005780368.1 CDS HPGAM_03245 NC_017371.1 658765 659916 D COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase (NiFe) small subunit HydA 658765..659916 Helicobacter pylori Gambia94/24 12360444 YP_005780369.1 CDS HPGAM_03250 NC_017371.1 659929 661665 D COG0374 Ni,Fe-hydrogenase I large subunit; nickel-dependent hydrogenase, large subunit 659929..661665 Helicobacter pylori Gambia94/24 12360445 YP_005780370.1 CDS HPGAM_03255 NC_017371.1 661678 662352 D COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 661678..662352 Helicobacter pylori Gambia94/24 12360446 YP_005780371.1 CDS HPGAM_03260 NC_017371.1 662349 662885 D COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase expression/formation protein 662349..662885 Helicobacter pylori Gambia94/24 12360447 YP_005780372.1 CDS HPGAM_03265 NC_017371.1 662887 664425 D hypothetical protein 662887..664425 Helicobacter pylori Gambia94/24 12360448 YP_005780373.1 CDS HPGAM_03270 NC_017371.1 664430 664843 R hypothetical protein complement(664430..664843) Helicobacter pylori Gambia94/24 12360449 YP_005780374.1 CDS HPGAM_03275 NC_017371.1 664962 665414 R hypothetical protein complement(664962..665414) Helicobacter pylori Gambia94/24 12360450 YP_005780375.1 CDS HPGAM_03280 NC_017371.1 665595 666521 D putative Outer membrane protein 665595..666521 Helicobacter pylori Gambia94/24 12360451 YP_005780376.1 CDS HPGAM_03285 NC_017371.1 666760 667437 R COG0603 Predicted PP-loop superfamily ATPase; hypothetical protein complement(666760..667437) Helicobacter pylori Gambia94/24 12360452 YP_005780377.1 CDS HPGAM_03290 NC_017371.1 667500 668714 D COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polynucleotide adenylyltransferase 667500..668714 Helicobacter pylori Gambia94/24 12360453 YP_005780378.1 CDS HPGAM_03295 NC_017371.1 668736 669230 D hypothetical protein 668736..669230 Helicobacter pylori Gambia94/24 12360454 YP_005780379.1 CDS HPGAM_03300 NC_017371.1 669245 670102 D COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 3-hydroxyacid dehydrogenase 669245..670102 Helicobacter pylori Gambia94/24 12360455 YP_005780380.1 CDS HPGAM_03315 NC_017371.1 670819 671028 R hypothetical protein complement(670819..671028) Helicobacter pylori Gambia94/24 12360456 YP_005780381.1 CDS HPGAM_03320 NC_017371.1 671088 672407 D COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamylglutaminyl-tRNA synthetase 671088..672407 Helicobacter pylori Gambia94/24 12360457 YP_005780382.1 CDS HPGAM_03325 NC_017371.1 672404 672697 D COG0762 Predicted integral membrane protein; hypothetical protein 672404..672697 Helicobacter pylori Gambia94/24 12360458 YP_005780383.1 CDS HPGAM_03330 NC_017371.1 672706 674388 D COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein transglycosylase 672706..674388 Helicobacter pylori Gambia94/24 12360459 YP_005780384.1 CDS HPGAM_03335 NC_017371.1 674385 675206 D COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 674385..675206 Helicobacter pylori Gambia94/24 12360460 YP_005780385.1 CDS HPGAM_03340 NC_017371.1 675218 675625 D hypothetical protein 675218..675625 Helicobacter pylori Gambia94/24 12360461 YP_005780386.1 CDS HPGAM_03345 NC_017371.1 675628 676896 D COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 675628..676896 Helicobacter pylori Gambia94/24 12360462 YP_005780387.1 CDS aspA NC_017371.1 676953 678359 D COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 676953..678359 Helicobacter pylori Gambia94/24 12360463 YP_005780388.1 CDS HPGAM_03355 NC_017371.1 678404 678994 D COG1573 Uracil-DNA glycosylase; hypothetical protein 678404..678994 Helicobacter pylori Gambia94/24 12360464 YP_005780389.1 CDS HPGAM_03360 NC_017371.1 679003 680370 R Alpha1, 3-fucosyltransferase complement(679003..680370) Helicobacter pylori Gambia94/24 12360465 YP_005780390.1 CDS HPGAM_03365 NC_017371.1 680409 681032 R COG0560 Phosphoserine phosphatase; phosphoserine phosphatase complement(680409..681032) Helicobacter pylori Gambia94/24 12360466 YP_005780391.1 CDS HPGAM_03370 NC_017371.1 681047 681550 R COG1528 Ferritin-like protein; ferritin complement(681047..681550) Helicobacter pylori Gambia94/24 12360467 YP_005780392.1 CDS HPGAM_03375 NC_017371.1 681860 682942 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 681860..682942 Helicobacter pylori Gambia94/24 12360468 YP_005780393.1 CDS HPGAM_03390 NC_017371.1 685763 686824 D COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 685763..686824 Helicobacter pylori Gambia94/24 12360469 YP_005780394.1 CDS HPGAM_03395 NC_017371.1 686830 688128 D COG0612 Predicted Zn-dependent peptidases; processing protease 686830..688128 Helicobacter pylori Gambia94/24 12360470 YP_005780395.1 CDS HPGAM_03400 NC_017371.1 688097 688237 R hypothetical protein complement(688097..688237) Helicobacter pylori Gambia94/24 12360471 YP_005780396.1 CDS gatB NC_017371.1 688125 689552 D COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 688125..689552 Helicobacter pylori Gambia94/24 12360472 YP_005780397.1 CDS HPGAM_03410 NC_017371.1 689552 690799 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 689552..690799 Helicobacter pylori Gambia94/24 12360473 YP_005780398.1 CDS HPGAM_03415 NC_017371.1 690809 691816 D COG2956 Predicted N-acetylglucosaminyl transferase; hypothetical protein 690809..691816 Helicobacter pylori Gambia94/24 12360474 YP_005780399.1 CDS rnhA NC_017371.1 691818 692249 D COG0328 Ribonuclease HI; ribonuclease H 691818..692249 Helicobacter pylori Gambia94/24 12360475 YP_005780400.1 CDS rnc NC_017371.1 692261 692980 D COG0571 dsRNA-specific ribonuclease; ribonuclease III 692261..692980 Helicobacter pylori Gambia94/24 12360476 YP_005780401.1 CDS HPGAM_03430 NC_017371.1 692977 694074 D COG0082 Chorismate synthase; chorismate synthase 692977..694074 Helicobacter pylori Gambia94/24 12360477 YP_005780402.1 CDS HPGAM_03435 NC_017371.1 694112 694627 D hypothetical protein 694112..694627 Helicobacter pylori Gambia94/24 12360478 YP_005780403.1 CDS HPGAM_03440 NC_017371.1 694627 696000 D COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 694627..696000 Helicobacter pylori Gambia94/24 12360479 YP_005780404.1 CDS HPGAM_03445 NC_017371.1 695997 697298 D COG0247 Fe-S oxidoreductase; putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) 695997..697298 Helicobacter pylori Gambia94/24 12360480 YP_005780405.1 CDS HPGAM_03450 NC_017371.1 697375 698907 D COG4889 Predicted helicase; type II R-M system protein 697375..698907 Helicobacter pylori Gambia94/24 12360481 YP_005780406.1 CDS HPGAM_03455 NC_017371.1 698843 702439 D COG4889 Predicted helicase; hypothetical protein 698843..702439 Helicobacter pylori Gambia94/24 12360482 YP_005780407.1 CDS HPGAM_03460 NC_017371.1 702436 704919 D COG0846 NAD-dependent protein deacetylases, SIR2 family; hypothetical protein 702436..704919 Helicobacter pylori Gambia94/24 12360483 YP_005780408.1 CDS HPGAM_03465 NC_017371.1 704938 705045 D hypothetical protein 704938..705045 Helicobacter pylori Gambia94/24 12360484 YP_005780409.1 CDS HPGAM_03470 NC_017371.1 705140 705952 D putative Outer membrane protein 705140..705952 Helicobacter pylori Gambia94/24 12360485 YP_005780410.1 CDS HPGAM_03475 NC_017371.1 706112 707284 D COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase 706112..707284 Helicobacter pylori Gambia94/24 12360486 YP_005780411.1 CDS HPGAM_03480 NC_017371.1 707563 708633 D COG0582 Integrase; phage integrase family site specific recombinase 707563..708633 Helicobacter pylori Gambia94/24 12360487 YP_005780412.1 CDS HPGAM_03485 NC_017371.1 708696 709202 R COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(708696..709202) Helicobacter pylori Gambia94/24 12360488 YP_005780413.1 CDS HPGAM_03490 NC_017371.1 709202 709969 R COG0730 Predicted permeases; hypothetical protein complement(709202..709969) Helicobacter pylori Gambia94/24 12360489 YP_005780414.1 CDS HPGAM_03495 NC_017371.1 710080 711027 R COG0673 Predicted dehydrogenases and related proteins; putative lipopolysaccharide biosynthesis protein complement(710080..711027) Helicobacter pylori Gambia94/24 12360490 YP_005780415.1 CDS HPGAM_03500 NC_017371.1 711089 713455 R COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha complement(711089..713455) Helicobacter pylori Gambia94/24 12360491 YP_005780416.1 CDS HPGAM_03505 NC_017371.1 713655 714119 R hypothetical protein complement(713655..714119) Helicobacter pylori Gambia94/24 12360492 YP_005780417.1 CDS HPGAM_03510 NC_017371.1 714143 714478 R hypothetical protein complement(714143..714478) Helicobacter pylori Gambia94/24 12360493 YP_005780418.1 CDS glmU NC_017371.1 714700 716001 R COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase complement(714700..716001) Helicobacter pylori Gambia94/24 12360494 YP_005780419.1 CDS fliP NC_017371.1 716098 716844 D COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 716098..716844 Helicobacter pylori Gambia94/24 12360495 YP_005780420.1 CDS HPGAM_03525 NC_017371.1 716888 719191 R COG4772 Outer membrane receptor for Fe3+-dicitrate; iron(III) dicitrate transport protein complement(716888..719191) Helicobacter pylori Gambia94/24 12360496 YP_005780421.1 CDS HPGAM_03530 NC_017371.1 719451 721379 R COG0370 Fe2+ transport system protein B; ferrous iron transport protein B complement(719451..721379) Helicobacter pylori Gambia94/24 12360497 YP_005780422.1 CDS HPGAM_03535 NC_017371.1 721518 722330 D COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 721518..722330 Helicobacter pylori Gambia94/24 12360498 YP_005780423.1 CDS HPGAM_03565 NC_017371.1 724618 725118 R COG4647 Acetone carboxylase, gamma subunit; hypothetical protein complement(724618..725118) Helicobacter pylori Gambia94/24 12360499 YP_005780424.1 CDS HPGAM_03570 NC_017371.1 725142 727439 R COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit; N-methylhydantoinase complement(725142..727439) Helicobacter pylori Gambia94/24 12360500 YP_005780425.1 CDS HPGAM_03575 NC_017371.1 727451 729592 R COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A complement(727451..729592) Helicobacter pylori Gambia94/24 12360501 YP_005780426.1 CDS HPGAM_03580 NC_017371.1 729828 730838 R COG3528 Uncharacterized protein conserved in bacteria; putative Outer membrane protein complement(729828..730838) Helicobacter pylori Gambia94/24 12360502 YP_005780427.1 CDS HPGAM_03585 NC_017371.1 730966 732330 R COG2031 Short chain fatty acids transporter; short-chain fatty acids transporter complement(730966..732330) Helicobacter pylori Gambia94/24 12360503 YP_005780428.1 CDS HPGAM_03590 NC_017371.1 732350 732973 R COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; succinyl-CoA-transferase subunit B complement(732350..732973) Helicobacter pylori Gambia94/24 12360504 YP_005780429.1 CDS HPGAM_03595 NC_017371.1 732970 733668 R COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; succinyl-CoA-transferase subunit A complement(732970..733668) Helicobacter pylori Gambia94/24 12360505 YP_005780430.1 CDS HPGAM_03600 NC_017371.1 733679 734854 R COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase complement(733679..734854) Helicobacter pylori Gambia94/24 12360506 YP_005780431.1 CDS HPGAM_03605 NC_017371.1 735136 736164 D hypothetical protein 735136..736164 Helicobacter pylori Gambia94/24 12360507 YP_005780432.1 CDS HPGAM_03610 NC_017371.1 736157 736543 D COG0818 Diacylglycerol kinase; diacylglycerol kinase 736157..736543 Helicobacter pylori Gambia94/24 12360508 YP_005780433.1 CDS HPGAM_03615 NC_017371.1 736559 739045 D COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 736559..739045 Helicobacter pylori Gambia94/24 12360509 YP_005780434.1 CDS HPGAM_03620 NC_017371.1 739045 739518 D hypothetical protein 739045..739518 Helicobacter pylori Gambia94/24 12360510 YP_005780435.1 CDS HPGAM_03625 NC_017371.1 739515 740660 D COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; putative transcriptional regulator 739515..740660 Helicobacter pylori Gambia94/24 12360511 YP_005780436.1 CDS uvrA NC_017371.1 741326 744151 R COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A complement(741326..744151) Helicobacter pylori Gambia94/24 12360512 YP_005780437.1 CDS HPGAM_03635 NC_017371.1 744316 745137 D outer membrane protein HopE 744316..745137 Helicobacter pylori Gambia94/24 12360513 YP_005780438.1 CDS HPGAM_03640 NC_017371.1 745310 746236 D COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltranserfase 745310..746236 Helicobacter pylori Gambia94/24 12360514 YP_005780439.1 CDS HPGAM_03645 NC_017371.1 746244 746588 D hypothetical protein 746244..746588 Helicobacter pylori Gambia94/24 12360515 YP_005780440.1 CDS HPGAM_03650 NC_017371.1 747039 747941 D COG1912 Uncharacterized conserved protein; hypothetical protein 747039..747941 Helicobacter pylori Gambia94/24 12360516 YP_005780441.1 CDS HPGAM_03655 NC_017371.1 748167 750125 D hypothetical protein 748167..750125 Helicobacter pylori Gambia94/24 12360517 YP_005780442.1 CDS HPGAM_03660 NC_017371.1 750317 751537 D COG1896 Predicted hydrolases of HD superfamily; hypothetical protein 750317..751537 Helicobacter pylori Gambia94/24 12360518 YP_005780443.1 CDS HPGAM_03675 NC_017371.1 752249 753493 R COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 complement(752249..753493) Helicobacter pylori Gambia94/24 12360519 YP_005780444.1 CDS HPGAM_03680 NC_017371.1 753496 754218 R COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein complement(753496..754218) Helicobacter pylori Gambia94/24 12360520 YP_005780445.1 CDS HPGAM_03685 NC_017371.1 754231 754632 R COG0802 Predicted ATPase or kinase; hypothetical protein complement(754231..754632) Helicobacter pylori Gambia94/24 12360521 YP_005780446.1 CDS HPGAM_03690 NC_017371.1 754629 756368 R COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau complement(754629..756368) Helicobacter pylori Gambia94/24 12360522 YP_005780447.1 CDS HPGAM_03695 NC_017371.1 756437 757069 R COG1279 Lysine efflux permease; hypothetical protein complement(756437..757069) Helicobacter pylori Gambia94/24 12360523 YP_005780448.1 CDS HPGAM_03700 NC_017371.1 757147 757269 R hypothetical protein complement(757147..757269) Helicobacter pylori Gambia94/24 12360524 YP_005780449.1 CDS HPGAM_03705 NC_017371.1 757331 757753 D hypothetical protein 757331..757753 Helicobacter pylori Gambia94/24 12360525 YP_005780450.1 CDS HPGAM_03710 NC_017371.1 757786 758247 D hypothetical protein 757786..758247 Helicobacter pylori Gambia94/24 12360526 YP_005780451.1 CDS HPGAM_03715 NC_017371.1 758640 760526 D putative Outer membrane protein 758640..760526 Helicobacter pylori Gambia94/24 12360527 YP_005780452.1 CDS HPGAM_03720 NC_017371.1 760603 761934 R COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter complement(760603..761934) Helicobacter pylori Gambia94/24 12360528 YP_005780453.1 CDS HPGAM_03725 NC_017371.1 762064 763062 D COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 762064..763062 Helicobacter pylori Gambia94/24 12360529 YP_005780454.1 CDS HPGAM_03730 NC_017371.1 763102 763206 D hypothetical protein 763102..763206 Helicobacter pylori Gambia94/24 12360530 YP_005780455.1 CDS HPGAM_03735 NC_017371.1 763203 765089 R putative Outer membrane protein complement(763203..765089) Helicobacter pylori Gambia94/24 12360531 YP_005780456.1 CDS HPGAM_03740 NC_017371.1 765386 766303 R putative Outer membrane protein complement(765386..766303) Helicobacter pylori Gambia94/24 12360532 YP_005780457.1 CDS HPGAM_03745 NC_017371.1 766273 767259 R COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B complement(766273..767259) Helicobacter pylori Gambia94/24 12360533 YP_005780458.1 CDS HPGAM_03750 NC_017371.1 767350 768366 R COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase complement(767350..768366) Helicobacter pylori Gambia94/24 12360534 YP_005780459.1 CDS HPGAM_03755 NC_017371.1 768404 769471 R hypothetical protein complement(768404..769471) Helicobacter pylori Gambia94/24 12360535 YP_005780460.1 CDS HPGAM_03760 NC_017371.1 769480 769785 R hypothetical protein complement(769480..769785) Helicobacter pylori Gambia94/24 12360536 YP_005780461.1 CDS HPGAM_03765 NC_017371.1 769775 769885 R hypothetical protein complement(769775..769885) Helicobacter pylori Gambia94/24 12360537 YP_005780462.1 CDS HPGAM_03770 NC_017371.1 769911 771608 R COG0218 Predicted GTPase; hypothetical protein complement(769911..771608) Helicobacter pylori Gambia94/24 12360538 YP_005780463.1 CDS HPGAM_03795 NC_017371.1 773607 774926 R COG0621 2-methylthioadenine synthetase; hypothetical protein complement(773607..774926) Helicobacter pylori Gambia94/24 12360539 YP_005780464.1 CDS HPGAM_03800 NC_017371.1 774928 775389 R COG2236 Predicted phosphoribosyltransferases; putative nucleotide phosphoribosyltransferase complement(774928..775389) Helicobacter pylori Gambia94/24 12360540 YP_005780465.1 CDS HPGAM_03805 NC_017371.1 775398 776507 R COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; putative aminotransferase complement(775398..776507) Helicobacter pylori Gambia94/24 12360541 YP_005780466.1 CDS HPGAM_03810 NC_017371.1 776657 777133 D COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 776657..777133 Helicobacter pylori Gambia94/24 12360542 YP_005780467.1 CDS ddl NC_017371.1 777211 778254 D COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 777211..778254 Helicobacter pylori Gambia94/24 12360543 YP_005780468.1 CDS HPGAM_03820 NC_017371.1 778254 778979 D COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 778254..778979 Helicobacter pylori Gambia94/24 12360544 YP_005780469.1 CDS HPGAM_03825 NC_017371.1 778966 780447 D COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-murnac-pentapeptide presynthetase 778966..780447 Helicobacter pylori Gambia94/24 12360545 YP_005780470.1 CDS HPGAM_03830 NC_017371.1 780457 780942 D COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; putative HIT family protein 780457..780942 Helicobacter pylori Gambia94/24 12360546 YP_005780471.1 CDS HPGAM_03835 NC_017371.1 781007 781963 D COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 781007..781963 Helicobacter pylori Gambia94/24 12360547 YP_005780472.1 CDS HPGAM_03840 NC_017371.1 782014 783135 R COG0772 Bacterial cell division membrane protein; putative rod shape-determining protein complement(782014..783135) Helicobacter pylori Gambia94/24 12360549 YP_005780473.1 CDS HPGAM_03855 NC_017371.1 784530 785513 D COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 784530..785513 Helicobacter pylori Gambia94/24 12360550 YP_005780474.1 CDS HPGAM_03860 NC_017371.1 785476 786723 D COG3979 Uncharacterized protein contain chitin-binding domain type 3; hypothetical protein 785476..786723 Helicobacter pylori Gambia94/24 12360551 YP_005780475.1 CDS HPGAM_03865 NC_017371.1 786733 787911 D COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 786733..787911 Helicobacter pylori Gambia94/24 12360552 YP_005780476.1 CDS HPGAM_03870 NC_017371.1 787911 788582 D COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein 787911..788582 Helicobacter pylori Gambia94/24 12360553 YP_005780477.1 CDS HPGAM_03875 NC_017371.1 788569 789375 D COG2177 Cell division protein; cell division protein FtsX 788569..789375 Helicobacter pylori Gambia94/24 12360554 YP_005780478.1 CDS HPGAM_03880 NC_017371.1 789368 790570 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 789368..790570 Helicobacter pylori Gambia94/24 12360555 YP_005780479.1 CDS HPGAM_03885 NC_017371.1 790676 791035 D COG1334 Uncharacterized flagellar protein FlaG; flagellar protein FlaG 790676..791035 Helicobacter pylori Gambia94/24 12360556 YP_005780480.1 CDS fliD NC_017371.1 791052 793109 D COG1345 Flagellar capping protein; flagellar capping protein 791052..793109 Helicobacter pylori Gambia94/24 12360557 YP_005780481.1 CDS fliS NC_017371.1 793151 793531 D COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 793151..793531 Helicobacter pylori Gambia94/24 12360558 YP_005780482.1 CDS HPGAM_03900 NC_017371.1 793518 793757 D hypothetical protein 793518..793757 Helicobacter pylori Gambia94/24 12360559 YP_005780483.1 CDS HPGAM_03905 NC_017371.1 793810 794481 D COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; hypothetical protein 793810..794481 Helicobacter pylori Gambia94/24 12360560 YP_005780484.1 CDS HPGAM_03910 NC_017371.1 794483 794629 D hypothetical protein 794483..794629 Helicobacter pylori Gambia94/24 12360561 YP_005780485.1 CDS HPGAM_03915 NC_017371.1 794633 795511 D COG0388 Predicted amidohydrolase; hypothetical protein 794633..795511 Helicobacter pylori Gambia94/24 12360562 YP_005780486.1 CDS HPGAM_03920 NC_017371.1 795638 796951 D COG2056 Predicted permease; hypothetical protein 795638..796951 Helicobacter pylori Gambia94/24 12360563 YP_005780487.1 CDS HPGAM_03925 NC_017371.1 797014 798267 D COG0534 Na+-driven multidrug efflux pump; multidrug efflux protein 797014..798267 Helicobacter pylori Gambia94/24 12360564 YP_005780488.1 CDS HPGAM_03930 NC_017371.1 798268 799857 R COG1418 Predicted HD superfamily hydrolase; phosphodiesterase complement(798268..799857) Helicobacter pylori Gambia94/24 12360565 YP_005780489.1 CDS HPGAM_03935 NC_017371.1 799757 800398 R COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase complement(799757..800398) Helicobacter pylori Gambia94/24 12360566 YP_005780490.1 CDS HPGAM_03940 NC_017371.1 800523 801080 D hypothetical protein 800523..801080 Helicobacter pylori Gambia94/24 12360567 YP_005780491.1 CDS HPGAM_03945 NC_017371.1 801086 801964 D COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 801086..801964 Helicobacter pylori Gambia94/24 12360568 YP_005780492.1 CDS HPGAM_03950 NC_017371.1 802003 802323 R COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein complement(802003..802323) Helicobacter pylori Gambia94/24 12360569 YP_005780493.1 CDS HPGAM_03955 NC_017371.1 802384 803358 R hypothetical protein complement(802384..803358) Helicobacter pylori Gambia94/24 12360570 YP_005780494.1 CDS HPGAM_03960 NC_017371.1 803369 804931 R hypothetical protein complement(803369..804931) Helicobacter pylori Gambia94/24 12360571 YP_005780495.1 CDS moaA NC_017371.1 805166 806131 R COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A complement(805166..806131) Helicobacter pylori Gambia94/24 12360572 YP_005780496.1 CDS HPGAM_03970 NC_017371.1 806218 806823 D COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 806218..806823 Helicobacter pylori Gambia94/24 12360573 YP_005780497.1 CDS flhB NC_017371.1 806816 807892 D COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 806816..807892 Helicobacter pylori Gambia94/24 12360574 YP_005780498.1 CDS HPGAM_03980 NC_017371.1 807990 808727 R hypothetical protein complement(807990..808727) Helicobacter pylori Gambia94/24 12360575 YP_005780499.1 CDS HPGAM_03985 NC_017371.1 808735 810093 R COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase complement(808735..810093) Helicobacter pylori Gambia94/24 12360576 YP_005780500.1 CDS HPGAM_03990 NC_017371.1 810100 811191 R COG2070 Dioxygenases related to 2-nitropropane dioxygenase; hypothetical protein complement(810100..811191) Helicobacter pylori Gambia94/24 12360577 YP_005780501.1 CDS HPGAM_03995 NC_017371.1 811208 812416 R COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase complement(811208..812416) Helicobacter pylori Gambia94/24 12360578 YP_005780502.1 CDS HPGAM_04000 NC_017371.1 812436 814766 R COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase complement(812436..814766) Helicobacter pylori Gambia94/24 12360579 YP_005780503.1 CDS rpoZ NC_017371.1 814753 814977 R COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega complement(814753..814977) Helicobacter pylori Gambia94/24 12360580 YP_005780504.1 CDS pyrH NC_017371.1 815019 815741 R COG0528 Uridylate kinase; uridylate kinase complement(815019..815741) Helicobacter pylori Gambia94/24 12360581 YP_005780505.1 CDS HPGAM_04015 NC_017371.1 815832 816515 R COG1427 Predicted periplasmic solute-binding protein; hypothetical protein complement(815832..816515) Helicobacter pylori Gambia94/24 12360582 YP_005780506.1 CDS HPGAM_04020 NC_017371.1 816651 819209 D COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 816651..819209 Helicobacter pylori Gambia94/24 12360583 YP_005780507.1 CDS HPGAM_04025 NC_017371.1 819291 819557 D hypothetical protein 819291..819557 Helicobacter pylori Gambia94/24 12360584 YP_005780508.1 CDS HPGAM_04030 NC_017371.1 819675 819851 R hypothetical protein complement(819675..819851) Helicobacter pylori Gambia94/24 12360585 YP_005780509.1 CDS HPGAM_04035 NC_017371.1 819845 821134 D hypothetical protein 819845..821134 Helicobacter pylori Gambia94/24 12360586 YP_005780510.1 CDS HPGAM_04040 NC_017371.1 821229 822596 D outermembrane protein HofE 821229..822596 Helicobacter pylori Gambia94/24 12360587 YP_005780511.1 CDS HPGAM_04045 NC_017371.1 822603 823130 R hypothetical protein complement(822603..823130) Helicobacter pylori Gambia94/24 12360588 YP_005780512.1 CDS lolA NC_017371.1 823619 824173 R COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone complement(823619..824173) Helicobacter pylori Gambia94/24 12360589 YP_005780513.1 CDS HPGAM_04055 NC_017371.1 824320 826917 D COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 824320..826917 Helicobacter pylori Gambia94/24 12360590 YP_005780514.1 CDS HPGAM_04060 NC_017371.1 826907 828139 D COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein release system transmembrane protein 826907..828139 Helicobacter pylori Gambia94/24 12360591 YP_005780515.1 CDS HPGAM_04065 NC_017371.1 828419 829918 D putative Outer membrane protein 828419..829918 Helicobacter pylori Gambia94/24 12360592 YP_005780516.1 CDS HPGAM_04070 NC_017371.1 829939 830052 R hypothetical protein complement(829939..830052) Helicobacter pylori Gambia94/24 12360593 YP_005780517.1 CDS HPGAM_04075 NC_017371.1 830134 831348 R COG0732 Restriction endonuclease S subunits; type I restriction-modification methylase complement(830134..831348) Helicobacter pylori Gambia94/24 12360594 YP_005780518.1 CDS HPGAM_04080 NC_017371.1 831387 833456 R COG2217 Cation transport ATPase; putative heavy-metal cation-transporting P-type ATPase complement(831387..833456) Helicobacter pylori Gambia94/24 12360595 YP_005780519.1 CDS HPGAM_04085 NC_017371.1 833481 835001 R COG0606 Predicted ATPase with chaperone activity; hypothetical protein complement(833481..835001) Helicobacter pylori Gambia94/24 12360596 YP_005780520.1 CDS def NC_017371.1 835007 835531 R COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase complement(835007..835531) Helicobacter pylori Gambia94/24 12360597 YP_005780521.1 CDS clpP NC_017371.1 835536 836123 R COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit complement(835536..836123) Helicobacter pylori Gambia94/24 12360598 YP_005780522.1 CDS tig NC_017371.1 836144 837499 R COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor complement(836144..837499) Helicobacter pylori Gambia94/24 12360599 YP_005780523.1 CDS HPGAM_04105 NC_017371.1 837612 838448 R putative Outer membrane protein complement(837612..838448) Helicobacter pylori Gambia94/24 12360600 YP_005780524.1 CDS HPGAM_04110 NC_017371.1 838470 839252 R neuraminyllactose-binding hemagglutinin complement(838470..839252) Helicobacter pylori Gambia94/24 12360601 YP_005780525.1 CDS moaC NC_017371.1 839371 839847 R COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC complement(839371..839847) Helicobacter pylori Gambia94/24 12360602 YP_005780526.1 CDS mogA NC_017371.1 839856 840386 R COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA complement(839856..840386) Helicobacter pylori Gambia94/24 12360603 YP_005780527.1 CDS HPGAM_04125 NC_017371.1 840399 840836 R COG0314 Molybdopterin converting factor, large subunit; molybdopterin converting factor subunit 2 complement(840399..840836) Helicobacter pylori Gambia94/24 12360604 YP_005780528.1 CDS HPGAM_04130 NC_017371.1 840837 841058 R COG1977 Molybdopterin converting factor, small subunit; putative molybdopterin converting factor subunit 1 complement(840837..841058) Helicobacter pylori Gambia94/24 12360605 YP_005780529.1 CDS ribA NC_017371.1 841136 841714 R COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II complement(841136..841714) Helicobacter pylori Gambia94/24 12360606 YP_005780530.1 CDS HPGAM_04140 NC_017371.1 841803 842642 R hypothetical protein complement(841803..842642) Helicobacter pylori Gambia94/24 12360607 YP_005780531.1 CDS HPGAM_04145 NC_017371.1 842729 843763 R COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein complement(842729..843763) Helicobacter pylori Gambia94/24 12360608 YP_005780532.1 CDS HPGAM_04150 NC_017371.1 843861 844706 R COG3306 Glycosyltransferase involved in LPS biosynthesis; family 25 glycosyl transferase complement(843861..844706) Helicobacter pylori Gambia94/24 12360609 YP_005780533.1 CDS HPGAM_04155 NC_017371.1 844788 845408 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 844788..845408 Helicobacter pylori Gambia94/24 12360610 YP_005780534.1 CDS acpS NC_017371.1 848017 848367 R COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase complement(848017..848367) Helicobacter pylori Gambia94/24 12360611 YP_005780535.1 CDS fliL NC_017371.1 848374 848925 R COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL complement(848374..848925) Helicobacter pylori Gambia94/24 12360612 YP_005780536.1 CDS HPGAM_04180 NC_017371.1 848934 849536 R COG0742 N6-adenine-specific methylase; putative N-6 adenine methyltransferase complement(848934..849536) Helicobacter pylori Gambia94/24 12360613 YP_005780537.1 CDS HPGAM_04185 NC_017371.1 849515 849850 R hypothetical protein complement(849515..849850) Helicobacter pylori Gambia94/24 12360614 YP_005780538.1 CDS HPGAM_04190 NC_017371.1 850311 851312 R COG1565 Uncharacterized conserved protein; hypothetical protein complement(850311..851312) Helicobacter pylori Gambia94/24 12360615 YP_005780539.1 CDS HPGAM_04195 NC_017371.1 851444 852061 D COG0491 Zn-dependent hydrolases, including glyoxylases; putative hydrolase 851444..852061 Helicobacter pylori Gambia94/24 12360616 YP_005780540.1 CDS HPGAM_04200 NC_017371.1 852062 852829 D COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamin biosynthesis protein (thiF) 852062..852829 Helicobacter pylori Gambia94/24 12360617 YP_005780541.1 CDS HPGAM_04205 NC_017371.1 852845 853618 D COG1291 Flagellar motor component; flagellar motor protein MotA 852845..853618 Helicobacter pylori Gambia94/24 12360618 YP_005780542.1 CDS motB NC_017371.1 853621 854394 D COG1360 Flagellar motor protein; flagellar motor protein MotB 853621..854394 Helicobacter pylori Gambia94/24 12360619 YP_005780543.1 CDS HPGAM_04215 NC_017371.1 854400 854837 D hypothetical protein 854400..854837 Helicobacter pylori Gambia94/24 12360620 YP_005780544.1 CDS HPGAM_04220 NC_017371.1 854951 856612 D COG1174 ABC-type proline/glycine betaine transport systems, permease component; putative osmoprotection binding protein 854951..856612 Helicobacter pylori Gambia94/24 12360621 YP_005780545.1 CDS HPGAM_04225 NC_017371.1 856615 857265 D COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; osmoprotection ATP-binding protein 856615..857265 Helicobacter pylori Gambia94/24 12360622 YP_005780546.1 CDS HPGAM_04230 NC_017371.1 857439 857900 D hypothetical protein 857439..857900 Helicobacter pylori Gambia94/24 12360623 YP_005780547.1 CDS uvrC NC_017371.1 857901 859685 D COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 857901..859685 Helicobacter pylori Gambia94/24 12360624 YP_005780548.1 CDS HPGAM_04240 NC_017371.1 859696 860961 D COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 859696..860961 Helicobacter pylori Gambia94/24 12360625 YP_005780549.1 CDS HPGAM_04245 NC_017371.1 860961 861305 D COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 860961..861305 Helicobacter pylori Gambia94/24 12360626 YP_005780550.1 CDS HPGAM_04250 NC_017371.1 861397 861717 D COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 861397..861717 Helicobacter pylori Gambia94/24 12360627 YP_005780551.1 CDS HPGAM_04255 NC_017371.1 861723 862658 D COG0492 Thioredoxin reductase; thioredoxin reductase 861723..862658 Helicobacter pylori Gambia94/24 12360628 YP_005780552.1 CDS HPGAM_04260 NC_017371.1 863018 863839 D COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 863018..863839 Helicobacter pylori Gambia94/24 12360629 YP_005780553.1 CDS HPGAM_04265 NC_017371.1 864051 864299 R COG0724 RNA-binding proteins (RRM domain); hypothetical protein complement(864051..864299) Helicobacter pylori Gambia94/24 12360630 YP_005780554.1 CDS HPGAM_04270 NC_017371.1 864453 864629 D hypothetical protein 864453..864629 Helicobacter pylori Gambia94/24 12360631 YP_005780555.1 CDS HPGAM_04275 NC_017371.1 864626 865306 R COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A complement(864626..865306) Helicobacter pylori Gambia94/24 12360632 YP_005780556.1 CDS HPGAM_04280 NC_017371.1 865428 866873 R COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase complement(865428..866873) Helicobacter pylori Gambia94/24 12360633 YP_005780557.1 CDS gatA NC_017371.1 866883 868244 R COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A complement(866883..868244) Helicobacter pylori Gambia94/24 12360634 YP_005780558.1 CDS coaE NC_017371.1 868303 868893 R COG0237 Dephospho-CoA kinase; dephospho-CoA kinase complement(868303..868893) Helicobacter pylori Gambia94/24 12360635 YP_005780559.1 CDS speE NC_017371.1 868895 869683 R COG0421 Spermidine synthase; spermidine synthase complement(868895..869683) Helicobacter pylori Gambia94/24 12360636 YP_005780560.1 CDS HPGAM_04300 NC_017371.1 869770 870660 R hypothetical protein complement(869770..870660) Helicobacter pylori Gambia94/24 12360637 YP_005780561.1 CDS HPGAM_04305 NC_017371.1 870737 872128 D COG1160 Predicted GTPases; GTP-binding protein Der 870737..872128 Helicobacter pylori Gambia94/24 12360638 YP_005780562.1 CDS HPGAM_04310 NC_017371.1 872269 872559 D COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 872269..872559 Helicobacter pylori Gambia94/24 12360639 YP_005780563.1 CDS HPGAM_04315 NC_017371.1 872787 872891 R hypothetical protein complement(872787..872891) Helicobacter pylori Gambia94/24 12360641 YP_005780564.1 CDS HPGAM_04320 NC_017371.1 872935 873030 R hypothetical protein complement(872935..873030) Helicobacter pylori Gambia94/24 12360642 YP_005780565.1 CDS HPGAM_04325 NC_017371.1 873054 873230 R hypothetical protein complement(873054..873230) Helicobacter pylori Gambia94/24 12360643 YP_005780566.1 CDS HPGAM_04330 NC_017371.1 873229 873834 D COG3018 Uncharacterized protein conserved in bacteria; hypothetical protein 873229..873834 Helicobacter pylori Gambia94/24 12360644 YP_005780567.1 CDS HPGAM_04335 NC_017371.1 873854 874471 D hypothetical protein 873854..874471 Helicobacter pylori Gambia94/24 12360645 YP_005780568.1 CDS HPGAM_04340 NC_017371.1 874468 876231 D COG2067 Long-chain fatty acid transport protein; putative Outer membrane protein 874468..876231 Helicobacter pylori Gambia94/24 12360646 YP_005780569.1 CDS HPGAM_04345 NC_017371.1 876235 877236 D COG1086 Predicted nucleoside-diphosphate sugar epimerases; UDP-GlcNAc C6 dehydratase/C5 epimerase 876235..877236 Helicobacter pylori Gambia94/24 12360647 YP_005780570.1 CDS HPGAM_04350 NC_017371.1 877233 878510 D COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 877233..878510 Helicobacter pylori Gambia94/24 12360648 YP_005780571.1 CDS HPGAM_04355 NC_017371.1 878510 879247 D hypothetical protein 878510..879247 Helicobacter pylori Gambia94/24 12360649 YP_005780572.1 CDS thiE NC_017371.1 879356 880009 R COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase complement(879356..880009) Helicobacter pylori Gambia94/24 12360650 YP_005780573.1 CDS HPGAM_04365 NC_017371.1 880002 880811 R COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase complement(880002..880811) Helicobacter pylori Gambia94/24 12360651 YP_005780574.1 CDS HPGAM_04370 NC_017371.1 880808 881587 R COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase complement(880808..881587) Helicobacter pylori Gambia94/24 12360652 YP_005780575.1 CDS HPGAM_04375 NC_017371.1 881679 884678 R COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein complement(881679..884678) Helicobacter pylori Gambia94/24 12360653 YP_005780576.1 CDS HPGAM_04380 NC_017371.1 884860 886062 R COG0732 Restriction endonuclease S subunits; type I restriction-modification methylase complement(884860..886062) Helicobacter pylori Gambia94/24 12360654 YP_005780577.1 CDS HPGAM_04385 NC_017371.1 886073 887728 R COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein complement(886073..887728) Helicobacter pylori Gambia94/24 12360655 YP_005780578.1 CDS HPGAM_04390 NC_017371.1 887833 888519 D COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 887833..888519 Helicobacter pylori Gambia94/24 12360656 YP_005780579.1 CDS HPGAM_04395 NC_017371.1 888542 889498 R COG2958 Uncharacterized protein conserved in bacteria; Excinuclease ATPase subunit complement(888542..889498) Helicobacter pylori Gambia94/24 12360657 YP_005780580.1 CDS HPGAM_04400 NC_017371.1 889495 891096 R COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein complement(889495..891096) Helicobacter pylori Gambia94/24 12360658 YP_005780581.1 CDS HPGAM_04405 NC_017371.1 891299 892276 D COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 891299..892276 Helicobacter pylori Gambia94/24 12360659 YP_005780582.1 CDS HPGAM_04410 NC_017371.1 892300 892878 R COG0279 Phosphoheptose isomerase; phosphoheptose isomerase complement(892300..892878) Helicobacter pylori Gambia94/24 12360660 YP_005780583.1 CDS HPGAM_04415 NC_017371.1 892871 894262 R COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; putative ADP-D-glycero-D-mannoheptose synthase complement(892871..894262) Helicobacter pylori Gambia94/24 12360661 YP_005780584.1 CDS HPGAM_04420 NC_017371.1 894259 895248 R COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase complement(894259..895248) Helicobacter pylori Gambia94/24 12360662 YP_005780585.1 CDS HPGAM_04425 NC_017371.1 895258 895782 R COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase complement(895258..895782) Helicobacter pylori Gambia94/24 12360663 YP_005780586.1 CDS HPGAM_04430 NC_017371.1 895769 896527 R COG2836 Uncharacterized conserved protein; hypothetical protein complement(895769..896527) Helicobacter pylori Gambia94/24 12360664 YP_005780587.1 CDS HPGAM_04435 NC_017371.1 896518 897189 R COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase complement(896518..897189) Helicobacter pylori Gambia94/24 12360665 YP_005780588.1 CDS HPGAM_04440 NC_017371.1 897194 898825 R hypothetical protein complement(897194..898825) Helicobacter pylori Gambia94/24 12360666 YP_005780589.1 CDS HPGAM_04445 NC_017371.1 898830 899486 R hypothetical protein complement(898830..899486) Helicobacter pylori Gambia94/24 12360667 YP_005780590.1 CDS dut NC_017371.1 899483 899920 R COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(899483..899920) Helicobacter pylori Gambia94/24 12360668 YP_005780591.1 CDS greA NC_017371.1 899910 900404 R COG0782 Transcription elongation factor; transcription elongation factor GreA complement(899910..900404) Helicobacter pylori Gambia94/24 12360669 YP_005780592.1 CDS HPGAM_04460 NC_017371.1 900445 901527 R COG0763 Lipid A disaccharide synthetase; ipid-A-disaccharide synthase complement(900445..901527) Helicobacter pylori Gambia94/24 12360670 YP_005780593.1 CDS HPGAM_04465 NC_017371.1 901527 901988 R hypothetical protein complement(901527..901988) Helicobacter pylori Gambia94/24 12360671 YP_005780594.1 CDS hypA NC_017371.1 901992 902345 R COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein complement(901992..902345) Helicobacter pylori Gambia94/24 12360672 YP_005780595.1 CDS flgE NC_017371.1 902404 904560 R COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE complement(902404..904560) Helicobacter pylori Gambia94/24 12360673 YP_005780596.1 CDS HPGAM_04480 NC_017371.1 904770 905504 R COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase complement(904770..905504) Helicobacter pylori Gambia94/24 12360674 YP_005780597.1 CDS HPGAM_04485 NC_017371.1 905780 906109 D COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate uptake protein 905780..906109 Helicobacter pylori Gambia94/24 12360675 YP_005780598.1 CDS HPGAM_04490 NC_017371.1 906150 906365 R hypothetical protein complement(906150..906365) Helicobacter pylori Gambia94/24 12360676 YP_005780599.1 CDS HPGAM_04495 NC_017371.1 906449 907324 R hypothetical protein complement(906449..907324) Helicobacter pylori Gambia94/24 12360677 YP_005780600.1 CDS HPGAM_04500 NC_017371.1 907475 908992 R COG0753 Catalase; catalase complement(907475..908992) Helicobacter pylori Gambia94/24 12360678 YP_005780601.1 CDS HPGAM_04505 NC_017371.1 909315 911690 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 909315..911690 Helicobacter pylori Gambia94/24 12360679 YP_005780602.1 CDS ruvC NC_017371.1 911691 912164 R COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase complement(911691..912164) Helicobacter pylori Gambia94/24 12360680 YP_005780603.1 CDS HPGAM_04515 NC_017371.1 912297 913028 D COG1432 Uncharacterized conserved protein; hypothetical protein 912297..913028 Helicobacter pylori Gambia94/24 12360681 YP_005780604.1 CDS HPGAM_04520 NC_017371.1 913711 913914 R hypothetical protein complement(913711..913914) Helicobacter pylori Gambia94/24 12360682 YP_005780605.1 CDS HPGAM_04525 NC_017371.1 914106 914633 R hypothetical protein complement(914106..914633) Helicobacter pylori Gambia94/24 12360683 YP_005780606.1 CDS ruvA NC_017371.1 914859 915410 R COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA complement(914859..915410) Helicobacter pylori Gambia94/24 12360684 YP_005780607.1 CDS HPGAM_04535 NC_017371.1 915435 917279 R hypothetical protein complement(915435..917279) Helicobacter pylori Gambia94/24 12360685 YP_005780608.1 CDS HPGAM_04540 NC_017371.1 917372 918832 D COG0728 Uncharacterized membrane protein, putative virulence factor; virulence factor MviN 917372..918832 Helicobacter pylori Gambia94/24 12360686 YP_005780609.1 CDS cysS NC_017371.1 918833 920230 D COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 918833..920230 Helicobacter pylori Gambia94/24 12360687 YP_005780610.1 CDS HPGAM_04550 NC_017371.1 920454 924320 D vacuolating cytotoxin 920454..924320 Helicobacter pylori Gambia94/24 12360688 YP_005780611.1 CDS HPGAM_04555 NC_017371.1 924392 925402 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(924392..925402) Helicobacter pylori Gambia94/24 12360689 YP_005780612.1 CDS HPGAM_04560 NC_017371.1 925575 926342 R COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; IRON(III) dicitrate transport system ATP-binding protein complement(925575..926342) Helicobacter pylori Gambia94/24 12360690 YP_005780613.1 CDS HPGAM_04565 NC_017371.1 926342 927322 R COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron(III) dicitrate ABC transporter, permease protein (fecD) complement(926342..927322) Helicobacter pylori Gambia94/24 12360691 YP_005780614.1 CDS HPGAM_04570 NC_017371.1 927315 928172 R COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); hypothetical protein complement(927315..928172) Helicobacter pylori Gambia94/24 12360692 YP_005780615.1 CDS HPGAM_04575 NC_017371.1 928312 928836 D COG1607 Acyl-CoA hydrolase; hypothetical protein 928312..928836 Helicobacter pylori Gambia94/24 12360693 YP_005780616.1 CDS HPGAM_04580 NC_017371.1 928880 929212 R COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein complement(928880..929212) Helicobacter pylori Gambia94/24 12360694 YP_005780617.1 CDS HPGAM_04585 NC_017371.1 929384 929503 R hypothetical protein complement(929384..929503) Helicobacter pylori Gambia94/24 12360695 YP_005780618.1 CDS HPGAM_04590 NC_017371.1 930074 930433 R hypothetical protein complement(930074..930433) Helicobacter pylori Gambia94/24 12360696 YP_005780619.1 CDS HPGAM_04595 NC_017371.1 930513 930749 R COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein complement(930513..930749) Helicobacter pylori Gambia94/24 12360697 YP_005780620.1 CDS HPGAM_04600 NC_017371.1 930763 931050 R hypothetical protein complement(930763..931050) Helicobacter pylori Gambia94/24 12360698 YP_005780621.1 CDS HPGAM_04605 NC_017371.1 931098 931364 R COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein complement(931098..931364) Helicobacter pylori Gambia94/24 12360699 YP_005780622.1 CDS HPGAM_04610 NC_017371.1 931345 931710 R hypothetical protein complement(931345..931710) Helicobacter pylori Gambia94/24 12360700 YP_005780623.1 CDS HPGAM_04615 NC_017371.1 932599 934839 R outer membrane protein complement(932599..934839) Helicobacter pylori Gambia94/24 12360701 YP_005780624.1 CDS HPGAM_04620 NC_017371.1 935851 936126 R COG0409 Hydrogenase maturation factor; hypothetical protein complement(935851..936126) Helicobacter pylori Gambia94/24 12360704 YP_005780625.1 CDS HPGAM_04625 NC_017371.1 936093 937205 R COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD complement(936093..937205) Helicobacter pylori Gambia94/24 12360705 YP_005780626.1 CDS HPGAM_04630 NC_017371.1 937211 937444 R COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone complement(937211..937444) Helicobacter pylori Gambia94/24 12360706 YP_005780627.1 CDS HPGAM_04635 NC_017371.1 937444 938172 R COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase/urease nickel incorporation protein hypB complement(937444..938172) Helicobacter pylori Gambia94/24 12360707 YP_005780628.1 CDS HPGAM_04640 NC_017371.1 938284 938412 R hypothetical protein complement(938284..938412) Helicobacter pylori Gambia94/24 12360708 YP_005780629.1 CDS HPGAM_04645 NC_017371.1 938423 938722 R COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; hypothetical protein complement(938423..938722) Helicobacter pylori Gambia94/24 12360709 YP_005780630.1 CDS HPGAM_04650 NC_017371.1 938733 939938 R COG0282 Acetate kinase; acetate kinase A/propionate kinase 2 complement(938733..939938) Helicobacter pylori Gambia94/24 12360710 YP_005780631.1 CDS HPGAM_04655 NC_017371.1 939950 941509 R COG0280 Phosphotransacetylase; phosphotransacetylase complement(939950..941509) Helicobacter pylori Gambia94/24 12360711 YP_005780632.1 CDS HPGAM_04660 NC_017371.1 941690 943246 D hypothetical protein 941690..943246 Helicobacter pylori Gambia94/24 12360712 YP_005780633.1 CDS flgD NC_017371.1 943297 944202 D COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 943297..944202 Helicobacter pylori Gambia94/24 12360713 YP_005780634.1 CDS flgE NC_017371.1 944199 946016 D COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 944199..946016 Helicobacter pylori Gambia94/24 12360714 YP_005780635.1 CDS HPGAM_04675 NC_017371.1 946068 946691 D putative restriction endonuclease 946068..946691 Helicobacter pylori Gambia94/24 12360715 YP_005780636.1 CDS HPGAM_04680 NC_017371.1 946672 947817 D COG0827 Adenine-specific DNA methylase; adenine specific DNA methyltransferase 946672..947817 Helicobacter pylori Gambia94/24 12360716 YP_005780637.1 CDS HPGAM_04695 NC_017371.1 950718 950813 R hypothetical protein complement(950718..950813) Helicobacter pylori Gambia94/24 12360717 YP_005780638.1 CDS HPGAM_04700 NC_017371.1 951010 952578 D Outer membrane porin and adhesin HopC; putative signal peptide 951010..952578 Helicobacter pylori Gambia94/24 12360718 YP_005780639.1 CDS HPGAM_04705 NC_017371.1 952600 954183 D Outer membrane protein/porin 952600..954183 Helicobacter pylori Gambia94/24 12360719 YP_005780640.1 CDS HPGAM_04710 NC_017371.1 954390 954515 D hypothetical protein 954390..954515 Helicobacter pylori Gambia94/24 12360720 YP_005780641.1 CDS HPGAM_04715 NC_017371.1 954522 954626 R hypothetical protein complement(954522..954626) Helicobacter pylori Gambia94/24 12360721 YP_005780642.1 CDS HPGAM_04720 NC_017371.1 954755 956299 R COG1190 Lysyl-tRNA synthetase (class II); putative Outer membrane protein complement(954755..956299) Helicobacter pylori Gambia94/24 12360722 YP_005780643.1 CDS HPGAM_04725 NC_017371.1 956478 956636 D hypothetical protein 956478..956636 Helicobacter pylori Gambia94/24 12360723 YP_005780644.1 CDS HPGAM_04740 NC_017371.1 959285 959716 R hypothetical protein complement(959285..959716) Helicobacter pylori Gambia94/24 12360724 YP_005780645.1 CDS carB NC_017371.1 959721 962978 R COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit complement(959721..962978) Helicobacter pylori Gambia94/24 12360725 YP_005780646.1 CDS HPGAM_04750 NC_017371.1 963075 963767 R COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein complement(963075..963767) Helicobacter pylori Gambia94/24 12360726 YP_005780647.1 CDS HPGAM_04755 NC_017371.1 963913 964911 D COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 963913..964911 Helicobacter pylori Gambia94/24 12360727 YP_005780648.1 CDS HPGAM_04760 NC_017371.1 964992 972581 D putative toxin-like outer membrane protein/vacuolating cytotoxin (VacA)-like protein 964992..972581 Helicobacter pylori Gambia94/24 12360728 YP_005780649.1 CDS HPGAM_04765 NC_017371.1 972634 973740 D putative Outer membrane protein 972634..973740 Helicobacter pylori Gambia94/24 12360729 YP_005780650.1 CDS HPGAM_04770 NC_017371.1 973811 974017 R COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase complement(973811..974017) Helicobacter pylori Gambia94/24 12360730 YP_005780651.1 CDS recR NC_017371.1 974152 974733 D COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 974152..974733 Helicobacter pylori Gambia94/24 12360731 YP_005780652.1 CDS truD NC_017371.1 974730 975875 D COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 974730..975875 Helicobacter pylori Gambia94/24 12360732 YP_005780653.1 CDS HPGAM_04785 NC_017371.1 975862 976794 D COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 975862..976794 Helicobacter pylori Gambia94/24 12360733 YP_005780654.1 CDS folE NC_017371.1 976795 977337 D COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 976795..977337 Helicobacter pylori Gambia94/24 12360734 YP_005780655.1 CDS HPGAM_04795 NC_017371.1 977353 978264 D COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 977353..978264 Helicobacter pylori Gambia94/24 12360735 YP_005780656.1 CDS surE NC_017371.1 978261 979064 D COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 978261..979064 Helicobacter pylori Gambia94/24 12360736 YP_005780657.1 CDS HPGAM_04805 NC_017371.1 979061 979720 D hypothetical protein 979061..979720 Helicobacter pylori Gambia94/24 12360737 YP_005780658.1 CDS HPGAM_04810 NC_017371.1 979722 980324 D COG0720 6-pyruvoyl-tetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase 979722..980324 Helicobacter pylori Gambia94/24 12360738 YP_005780659.1 CDS HPGAM_04815 NC_017371.1 980321 981076 D COG0602 Organic radical activating enzymes; hypothetical protein 980321..981076 Helicobacter pylori Gambia94/24 12360739 YP_005780660.1 CDS HPGAM_04820 NC_017371.1 981165 981650 D COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 981165..981650 Helicobacter pylori Gambia94/24 12360740 YP_005780661.1 CDS HPGAM_04825 NC_017371.1 981874 983862 D putative outer membrane protein 981874..983862 Helicobacter pylori Gambia94/24 12360741 YP_005780662.1 CDS HPGAM_04830 NC_017371.1 984014 984121 R hypothetical protein complement(984014..984121) Helicobacter pylori Gambia94/24 12360742 YP_005780663.1 CDS HPGAM_04835 NC_017371.1 984121 984213 R hypothetical protein complement(984121..984213) Helicobacter pylori Gambia94/24 12360743 YP_005780664.1 CDS HPGAM_04840 NC_017371.1 984293 985672 R COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter complement(984293..985672) Helicobacter pylori Gambia94/24 12360744 YP_005780665.1 CDS HPGAM_04845 NC_017371.1 985948 987666 R COG1479 Uncharacterized conserved protein; hypothetical protein complement(985948..987666) Helicobacter pylori Gambia94/24 12360745 YP_005780666.1 CDS HPGAM_04850 NC_017371.1 987740 988453 R COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter, permease protein (yckJ) complement(987740..988453) Helicobacter pylori Gambia94/24 12360746 YP_005780667.1 CDS HPGAM_04855 NC_017371.1 988437 989210 R COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter complement(988437..989210) Helicobacter pylori Gambia94/24 12360747 YP_005780668.1 CDS HPGAM_04860 NC_017371.1 989276 990409 R COG0787 Alanine racemase; alanine racemase complement(989276..990409) Helicobacter pylori Gambia94/24 12360748 YP_005780669.1 CDS HPGAM_04865 NC_017371.1 990416 991768 R COG1115 Na+/alanine symporter; putative sodium/alanine symporter complement(990416..991768) Helicobacter pylori Gambia94/24 12360749 YP_005780670.1 CDS HPGAM_04870 NC_017371.1 991809 993041 R COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase complement(991809..993041) Helicobacter pylori Gambia94/24 12360750 YP_005780671.1 CDS HPGAM_04875 NC_017371.1 993064 993441 R COG0251 Putative translation initiation inhibitor, yjgF family; translation initiation inhibitor complement(993064..993441) Helicobacter pylori Gambia94/24 12360751 YP_005780672.1 CDS HPGAM_04880 NC_017371.1 993511 993636 D hypothetical protein 993511..993636 Helicobacter pylori Gambia94/24 12360752 YP_005780673.1 CDS HPGAM_04890 NC_017371.1 994352 995833 D COG1757 Na+/H+ antiporter; hypothetical protein 994352..995833 Helicobacter pylori Gambia94/24 12360757 YP_005780674.1 CDS HPGAM_04895 NC_017371.1 995944 996051 R hypothetical protein complement(995944..996051) Helicobacter pylori Gambia94/24 12360758 YP_005780675.1 CDS HPGAM_04900 NC_017371.1 996156 996518 D hypothetical protein 996156..996518 Helicobacter pylori Gambia94/24 12360759 YP_005780676.1 CDS HPGAM_04905 NC_017371.1 996932 997945 R hypothetical protein complement(996932..997945) Helicobacter pylori Gambia94/24 12360760 YP_005780677.1 CDS HPGAM_04910 NC_017371.1 997955 998407 R COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase complement(997955..998407) Helicobacter pylori Gambia94/24 12360761 YP_005780678.1 CDS HPGAM_04915 NC_017371.1 998421 999290 R COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta complement(998421..999290) Helicobacter pylori Gambia94/24 12360762 YP_005780679.1 CDS HPGAM_04920 NC_017371.1 999371 999985 D COG0540 Aspartate carbamoyltransferase, catalytic chain; putative recombination protein RecO 999371..999985 Helicobacter pylori Gambia94/24 12360763 YP_005780680.1 CDS HPGAM_04925 NC_017371.1 999996 1000652 D COG1546 Uncharacterized protein (competence- and mitomycin-induced); hypothetical protein 999996..1000652 Helicobacter pylori Gambia94/24 12360764 YP_005780681.1 CDS HPGAM_04930 NC_017371.1 1000655 1001221 R hypothetical protein complement(1000655..1001221) Helicobacter pylori Gambia94/24 12360765 YP_005780682.1 CDS HPGAM_04935 NC_017371.1 1001285 1001917 R COG0778 Nitroreductase; putative aldehyde dehydrogenase complement(1001285..1001917) Helicobacter pylori Gambia94/24 12360766 YP_005780683.1 CDS HPGAM_04940 NC_017371.1 1001917 1002768 R COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase complement(1001917..1002768) Helicobacter pylori Gambia94/24 12360767 YP_005780684.1 CDS HPGAM_04945 NC_017371.1 1002777 1003505 R COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein complement(1002777..1003505) Helicobacter pylori Gambia94/24 12360768 YP_005780685.1 CDS HPGAM_04950 NC_017371.1 1003523 1004704 R COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase complement(1003523..1004704) Helicobacter pylori Gambia94/24 12360769 YP_005780686.1 CDS HPGAM_04955 NC_017371.1 1004705 1005472 R COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein complement(1004705..1005472) Helicobacter pylori Gambia94/24 12360770 YP_005780687.1 CDS HPGAM_04960 NC_017371.1 1005482 1006213 R COG0327 Uncharacterized conserved protein; hypothetical protein complement(1005482..1006213) Helicobacter pylori Gambia94/24 12360771 YP_005780688.1 CDS glyQ NC_017371.1 1006215 1007111 R COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha complement(1006215..1007111) Helicobacter pylori Gambia94/24 12360772 YP_005780689.1 CDS gpsA NC_017371.1 1007125 1008063 R COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase complement(1007125..1008063) Helicobacter pylori Gambia94/24 12360773 YP_005780690.1 CDS HPGAM_04975 NC_017371.1 1008340 1008591 R hypothetical protein complement(1008340..1008591) Helicobacter pylori Gambia94/24 12360774 YP_005780691.1 CDS HPGAM_04980 NC_017371.1 1008605 1010242 R COG0699 Predicted GTPases (dynamin-related); putative ATPase complement(1008605..1010242) Helicobacter pylori Gambia94/24 12360775 YP_005780692.1 CDS HPGAM_05010 NC_017371.1 1014554 1014691 R hypothetical protein complement(1014554..1014691) Helicobacter pylori Gambia94/24 12360776 YP_005780693.1 CDS HPGAM_05015 NC_017371.1 1014714 1014995 R hypothetical protein complement(1014714..1014995) Helicobacter pylori Gambia94/24 12360777 YP_005780694.1 CDS HPGAM_05020 NC_017371.1 1015011 1018070 R COG3696 Putative silver efflux pump; cobalt-zinc-cadmium resistance protein complement(1015011..1018070) Helicobacter pylori Gambia94/24 12360778 YP_005780695.1 CDS HPGAM_05025 NC_017371.1 1018070 1019149 R COG0845 Membrane-fusion protein; putative cobalt-zinc-cadmium resistance protein, CzcB family; putative signal peptide complement(1018070..1019149) Helicobacter pylori Gambia94/24 12360779 YP_005780696.1 CDS HPGAM_05030 NC_017371.1 1019146 1020429 R hypothetical protein complement(1019146..1020429) Helicobacter pylori Gambia94/24 12360780 YP_005780697.1 CDS glyS NC_017371.1 1020419 1022524 R COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta complement(1020419..1022524) Helicobacter pylori Gambia94/24 12360781 YP_005780698.1 CDS HPGAM_05040 NC_017371.1 1022643 1023731 D hypothetical protein 1022643..1023731 Helicobacter pylori Gambia94/24 12360782 YP_005780699.1 CDS HPGAM_05045 NC_017371.1 1023744 1025219 D COG0696 Phosphoglyceromutase; phosphoglyceromutase 1023744..1025219 Helicobacter pylori Gambia94/24 12360783 YP_005780700.1 CDS gatC NC_017371.1 1025234 1025515 D COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 1025234..1025515 Helicobacter pylori Gambia94/24 12360784 YP_005780701.1 CDS HPGAM_05055 NC_017371.1 1025611 1026930 R COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase complement(1025611..1026930) Helicobacter pylori Gambia94/24 12360785 YP_005780702.1 CDS HPGAM_05060 NC_017371.1 1027060 1028523 D COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 1027060..1028523 Helicobacter pylori Gambia94/24 12360786 YP_005780703.1 CDS HPGAM_05065 NC_017371.1 1028538 1030019 D COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 1028538..1030019 Helicobacter pylori Gambia94/24 12360787 YP_005780704.1 CDS HPGAM_05070 NC_017371.1 1030148 1031305 D COG0206 Cell division GTPase; cell division protein FtsZ 1030148..1031305 Helicobacter pylori Gambia94/24 12360788 YP_005780705.1 CDS HPGAM_05085 NC_017371.1 1033034 1033174 R hypothetical protein complement(1033034..1033174) Helicobacter pylori Gambia94/24 12360789 YP_005780706.1 CDS HPGAM_05090 NC_017371.1 1033223 1034047 R COG0668 Small-conductance mechanosensitive channel; hypothetical protein complement(1033223..1034047) Helicobacter pylori Gambia94/24 12360790 YP_005780707.1 CDS HPGAM_05095 NC_017371.1 1034212 1034310 D hypothetical protein 1034212..1034310 Helicobacter pylori Gambia94/24 12360791 YP_005780708.1 CDS HPGAM_05100 NC_017371.1 1034552 1036477 D COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein 1034552..1036477 Helicobacter pylori Gambia94/24 12360792 YP_005780709.1 CDS HPGAM_05105 NC_017371.1 1036470 1038065 D COG0550 Topoisomerase IA; topoisomerase I 1036470..1038065 Helicobacter pylori Gambia94/24 12360793 YP_005780710.1 CDS HPGAM_05110 NC_017371.1 1038062 1039279 D COG3504 Type IV secretory pathway, VirB9 components; conjugal plasmid transfer system protein 1038062..1039279 Helicobacter pylori Gambia94/24 12360794 YP_005780711.1 CDS HPGAM_05115 NC_017371.1 1039276 1040523 D COG2948 Type IV secretory pathway, VirB10 components; competence protein 1039276..1040523 Helicobacter pylori Gambia94/24 12360795 YP_005780712.1 CDS HPGAM_05120 NC_017371.1 1040498 1040593 D hypothetical protein 1040498..1040593 Helicobacter pylori Gambia94/24 12360796 YP_005780713.1 CDS HPGAM_05125 NC_017371.1 1040596 1040892 D hypothetical protein 1040596..1040892 Helicobacter pylori Gambia94/24 12360797 YP_005780714.1 CDS HPGAM_05130 NC_017371.1 1040882 1041145 D hypothetical protein 1040882..1041145 Helicobacter pylori Gambia94/24 12360798 YP_005780715.1 CDS HPGAM_05135 NC_017371.1 1041142 1041441 D hypothetical protein 1041142..1041441 Helicobacter pylori Gambia94/24 12360799 YP_005780716.1 CDS HPGAM_05140 NC_017371.1 1041441 1042382 D COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; VirB11 type IV secretion ATPase 1041441..1042382 Helicobacter pylori Gambia94/24 12360800 YP_005780717.1 CDS HPGAM_05145 NC_017371.1 1042379 1042834 D hypothetical protein 1042379..1042834 Helicobacter pylori Gambia94/24 12360801 YP_005780718.1 CDS HPGAM_05150 NC_017371.1 1042831 1043121 D hypothetical protein 1042831..1043121 Helicobacter pylori Gambia94/24 12360802 YP_005780719.1 CDS HPGAM_05155 NC_017371.1 1043122 1043679 D hypothetical protein 1043122..1043679 Helicobacter pylori Gambia94/24 12360803 YP_005780720.1 CDS HPGAM_05160 NC_017371.1 1043680 1045428 D COG3505 Type IV secretory pathway, VirD4 components; VirD4 coupling protein 1043680..1045428 Helicobacter pylori Gambia94/24 12360804 YP_005780721.1 CDS HPGAM_05165 NC_017371.1 1045673 1045807 R COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1045673..1045807) Helicobacter pylori Gambia94/24 12360805 YP_005780722.1 CDS HPGAM_05170 NC_017371.1 1045948 1046262 R hypothetical protein complement(1045948..1046262) Helicobacter pylori Gambia94/24 12360806 YP_005780723.1 CDS HPGAM_05185 NC_017371.1 1048593 1049771 R hypothetical protein complement(1048593..1049771) Helicobacter pylori Gambia94/24 12360807 YP_005780724.1 CDS HPGAM_05190 NC_017371.1 1049815 1050099 R hypothetical protein complement(1049815..1050099) Helicobacter pylori Gambia94/24 12360808 YP_005780725.1 CDS HPGAM_05195 NC_017371.1 1050182 1050838 R COG1192 ATPases involved in chromosome partitioning; chromosome partitioning protein ParA complement(1050182..1050838) Helicobacter pylori Gambia94/24 12360809 YP_005780726.1 CDS HPGAM_05210 NC_017371.1 1059690 1059836 D hypothetical protein 1059690..1059836 Helicobacter pylori Gambia94/24 12360810 YP_005780727.1 CDS HPGAM_05235 NC_017371.1 1062302 1064473 D hypothetical protein 1062302..1064473 Helicobacter pylori Gambia94/24 12360811 YP_005780728.1 CDS HPGAM_05240 NC_017371.1 1064601 1064735 D hypothetical protein 1064601..1064735 Helicobacter pylori Gambia94/24 12360812 YP_005780729.1 CDS HPGAM_05245 NC_017371.1 1064853 1065923 D hypothetical protein 1064853..1065923 Helicobacter pylori Gambia94/24 12360813 YP_005780730.1 CDS HPGAM_05250 NC_017371.1 1066107 1066331 D hypothetical protein 1066107..1066331 Helicobacter pylori Gambia94/24 12360814 YP_005780731.1 CDS HPGAM_05275 NC_017371.1 1068198 1069271 R COG0582 Integrase; integrase/recombinase (XERCD family) protein complement(1068198..1069271) Helicobacter pylori Gambia94/24 12360815 YP_005780732.1 CDS HPGAM_05280 NC_017371.1 1073860 1074300 D hypothetical protein 1073860..1074300 Helicobacter pylori Gambia94/24 12360818 YP_005780733.1 CDS HPGAM_05305 NC_017371.1 1077393 1077611 D COG1598 Uncharacterized conserved protein; hypothetical protein 1077393..1077611 Helicobacter pylori Gambia94/24 12360819 YP_005780734.1 CDS HPGAM_05310 NC_017371.1 1077604 1077798 D COG1724 Predicted periplasmic or secreted lipoprotein; hypothetical protein 1077604..1077798 Helicobacter pylori Gambia94/24 12360820 YP_005780735.1 CDS HPGAM_05315 NC_017371.1 1077872 1079719 R COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase complement(1077872..1079719) Helicobacter pylori Gambia94/24 12360821 YP_005780736.1 CDS HPGAM_05320 NC_017371.1 1079733 1080902 R COG0438 Glycosyltransferase; putative polysaccharide biosynthesis protein complement(1079733..1080902) Helicobacter pylori Gambia94/24 12360822 YP_005780737.1 CDS HPGAM_05325 NC_017371.1 1080907 1081335 R COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein complement(1080907..1081335) Helicobacter pylori Gambia94/24 12360823 YP_005780738.1 CDS HPGAM_05330 NC_017371.1 1081352 1082137 R COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase complement(1081352..1082137) Helicobacter pylori Gambia94/24 12360824 YP_005780739.1 CDS HPGAM_05335 NC_017371.1 1082141 1083160 R hypothetical protein complement(1082141..1083160) Helicobacter pylori Gambia94/24 12360825 YP_005780740.1 CDS HPGAM_05340 NC_017371.1 1083161 1085113 R COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase complement(1083161..1085113) Helicobacter pylori Gambia94/24 12360826 YP_005780741.1 CDS HPGAM_05345 NC_017371.1 1085283 1086452 D COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acid synthase 1085283..1086452 Helicobacter pylori Gambia94/24 12360827 YP_005780742.1 CDS HPGAM_05350 NC_017371.1 1086462 1088333 R COG0668 Small-conductance mechanosensitive channel; hypothetical protein complement(1086462..1088333) Helicobacter pylori Gambia94/24 12360828 YP_005780743.1 CDS HPGAM_05355 NC_017371.1 1088425 1088550 D hypothetical protein 1088425..1088550 Helicobacter pylori Gambia94/24 12360829 YP_005780744.1 CDS HPGAM_05360 NC_017371.1 1088898 1088996 R hypothetical protein complement(1088898..1088996) Helicobacter pylori Gambia94/24 12360830 YP_005780745.1 CDS HPGAM_05365 NC_017371.1 1089659 1090441 R hypothetical protein complement(1089659..1090441) Helicobacter pylori Gambia94/24 12360835 YP_005780746.1 CDS guaA NC_017371.1 1090492 1092018 R COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase complement(1090492..1092018) Helicobacter pylori Gambia94/24 12360836 YP_005780747.1 CDS HPGAM_05375 NC_017371.1 1092015 1092509 R hypothetical protein complement(1092015..1092509) Helicobacter pylori Gambia94/24 12360837 YP_005780748.1 CDS HPGAM_05380 NC_017371.1 1092674 1095064 R COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative S/N-oxide reductase complement(1092674..1095064) Helicobacter pylori Gambia94/24 12360838 YP_005780749.1 CDS HPGAM_05385 NC_017371.1 1095168 1095758 R COG2987 Urocanate hydratase; hypothetical protein complement(1095168..1095758) Helicobacter pylori Gambia94/24 12360839 YP_005780750.1 CDS HPGAM_05390 NC_017371.1 1095784 1097106 R COG0520 Selenocysteine lyase; nifS-like protein complement(1095784..1097106) Helicobacter pylori Gambia94/24 12360840 YP_005780751.1 CDS HPGAM_05395 NC_017371.1 1097125 1097439 R COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Hit-like protein involved in cell-cycle regulation complement(1097125..1097439) Helicobacter pylori Gambia94/24 12360841 YP_005780752.1 CDS pheS NC_017371.1 1097521 1098507 D COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1097521..1098507 Helicobacter pylori Gambia94/24 12360842 YP_005780753.1 CDS pheT NC_017371.1 1098507 1100801 D COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1098507..1100801 Helicobacter pylori Gambia94/24 12360843 YP_005780754.1 CDS HPGAM_05410 NC_017371.1 1100817 1102106 D COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1100817..1102106 Helicobacter pylori Gambia94/24 12360844 YP_005780755.1 CDS ispH NC_017371.1 1102096 1102920 D COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1102096..1102920 Helicobacter pylori Gambia94/24 12360845 YP_005780756.1 CDS rpsA NC_017371.1 1103042 1104700 D COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1103042..1104700 Helicobacter pylori Gambia94/24 12360846 YP_005780757.1 CDS HPGAM_05425 NC_017371.1 1104729 1105088 D hypothetical protein 1104729..1105088 Helicobacter pylori Gambia94/24 12360847 YP_005780758.1 CDS HPGAM_05430 NC_017371.1 1105277 1106851 D COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1105277..1106851 Helicobacter pylori Gambia94/24 12360848 YP_005780759.1 CDS HPGAM_05435 NC_017371.1 1106861 1108711 D COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1106861..1108711 Helicobacter pylori Gambia94/24 12360849 YP_005780760.1 CDS HPGAM_05440 NC_017371.1 1108734 1109402 D COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein 1108734..1109402 Helicobacter pylori Gambia94/24 12360850 YP_005780761.1 CDS HPGAM_05445 NC_017371.1 1109404 1110162 D COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 1109404..1110162 Helicobacter pylori Gambia94/24 12360851 YP_005780762.1 CDS HPGAM_05450 NC_017371.1 1110164 1111102 D COG0835 Chemotaxis signal transduction protein; putative chemotaxis protein 1110164..1111102 Helicobacter pylori Gambia94/24 12360852 YP_005780763.1 CDS HPGAM_05455 NC_017371.1 1111159 1113591 D COG0643 Chemotaxis protein histidine kinase and related kinases; histidine kinase 1111159..1113591 Helicobacter pylori Gambia94/24 12360853 YP_005780764.1 CDS HPGAM_05460 NC_017371.1 1113588 1114085 D COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein CheW 1113588..1114085 Helicobacter pylori Gambia94/24 12360854 YP_005780765.1 CDS HPGAM_05465 NC_017371.1 1114342 1114842 R COG2077 Peroxiredoxin; adhesin-thiol peroxidase complement(1114342..1114842) Helicobacter pylori Gambia94/24 12360855 YP_005780766.1 CDS HPGAM_05470 NC_017371.1 1115064 1115705 D COG0605 Superoxide dismutase; superoxide dismutase 1115064..1115705 Helicobacter pylori Gambia94/24 12360856 YP_005780767.1 CDS HPGAM_05475 NC_017371.1 1115759 1116490 D COG0500 SAM-dependent methyltransferases; hypothetical protein 1115759..1116490 Helicobacter pylori Gambia94/24 12360857 YP_005780768.1 CDS HPGAM_05480 NC_017371.1 1116552 1118411 R COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA complement(1116552..1118411) Helicobacter pylori Gambia94/24 12360858 YP_005780769.1 CDS HPGAM_05485 NC_017371.1 1118396 1118632 R hypothetical protein complement(1118396..1118632) Helicobacter pylori Gambia94/24 12360859 YP_005780770.1 CDS HPGAM_05490 NC_017371.1 1118645 1118872 R COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein complement(1118645..1118872) Helicobacter pylori Gambia94/24 12360860 YP_005780771.1 CDS HPGAM_05495 NC_017371.1 1119072 1119818 D hypothetical protein 1119072..1119818 Helicobacter pylori Gambia94/24 12360861 YP_005780772.1 CDS HPGAM_05500 NC_017371.1 1120091 1120615 R hypothetical protein complement(1120091..1120615) Helicobacter pylori Gambia94/24 12360862 YP_005780773.1 CDS HPGAM_05505 NC_017371.1 1120795 1122018 D COG0501 Zn-dependent protease with chaperone function; putative zinc-metallo protease 1120795..1122018 Helicobacter pylori Gambia94/24 12360863 YP_005780774.1 CDS HPGAM_05510 NC_017371.1 1122015 1122845 D COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1122015..1122845 Helicobacter pylori Gambia94/24 12360864 YP_005780775.1 CDS HPGAM_05515 NC_017371.1 1122911 1124257 D COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 1122911..1124257 Helicobacter pylori Gambia94/24 12360865 YP_005780776.1 CDS HPGAM_05520 NC_017371.1 1124271 1125554 R Alpha-(1,3)-fucosyltransferase complement(1124271..1125554) Helicobacter pylori Gambia94/24 12360866 YP_005780777.1 CDS HPGAM_05525 NC_017371.1 1125564 1128374 R COG1333 ResB protein required for cytochrome c biosynthesis; putative cytochrome C-type biogenesis protein complement(1125564..1128374) Helicobacter pylori Gambia94/24 12360867 YP_005780778.1 CDS HPGAM_05530 NC_017371.1 1128384 1129055 R COG2143 Thioredoxin-related protein; hypothetical protein complement(1128384..1129055) Helicobacter pylori Gambia94/24 12360868 YP_005780779.1 CDS hemH NC_017371.1 1129129 1130136 R COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase complement(1129129..1130136) Helicobacter pylori Gambia94/24 12360869 YP_005780780.1 CDS HPGAM_05540 NC_017371.1 1130192 1130623 D hypothetical protein 1130192..1130623 Helicobacter pylori Gambia94/24 12360870 YP_005780781.1 CDS HPGAM_05545 NC_017371.1 1130624 1131304 D COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1130624..1131304 Helicobacter pylori Gambia94/24 12360871 YP_005780782.1 CDS HPGAM_05550 NC_017371.1 1131388 1133643 R putative outer membrane protein complement(1131388..1133643) Helicobacter pylori Gambia94/24 12360872 YP_005780783.1 CDS dcd NC_017371.1 1133811 1134377 R COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase complement(1133811..1134377) Helicobacter pylori Gambia94/24 12360873 YP_005780784.1 CDS HPGAM_05560 NC_017371.1 1134508 1134993 D COG0511 Biotin carboxyl carrier protein; biotin carboxyl carrier protein 1134508..1134993 Helicobacter pylori Gambia94/24 12360874 YP_005780785.1 CDS HPGAM_05565 NC_017371.1 1134999 1136366 D COG0439 Biotin carboxylase; biotin carboxylase 1134999..1136366 Helicobacter pylori Gambia94/24 12360875 YP_005780786.1 CDS HPGAM_05580 NC_017371.1 1137548 1138510 D COG1015 Phosphopentomutase; putative adenine methyltransferase 1137548..1138510 Helicobacter pylori Gambia94/24 12360876 YP_005780787.1 CDS HPGAM_05585 NC_017371.1 1138510 1139058 D hypothetical protein 1138510..1139058 Helicobacter pylori Gambia94/24 12360877 YP_005780788.1 CDS HPGAM_05590 NC_017371.1 1139151 1139756 D hypothetical protein 1139151..1139756 Helicobacter pylori Gambia94/24 12360878 YP_005780789.1 CDS HPGAM_05595 NC_017371.1 1139753 1140889 D COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1139753..1140889 Helicobacter pylori Gambia94/24 12360879 YP_005780790.1 CDS nrdF NC_017371.1 1141279 1142304 D COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 1141279..1142304 Helicobacter pylori Gambia94/24 12360881 YP_005780791.1 CDS pcm NC_017371.1 1142314 1142943 D COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1142314..1142943 Helicobacter pylori Gambia94/24 12360882 YP_005780792.1 CDS HPGAM_05615 NC_017371.1 1142965 1144002 D COG0795 Predicted permeases; hypothetical protein 1142965..1144002 Helicobacter pylori Gambia94/24 12360883 YP_005780793.1 CDS truA NC_017371.1 1144003 1144731 D COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1144003..1144731 Helicobacter pylori Gambia94/24 12360884 YP_005780794.1 CDS HPGAM_05625 NC_017371.1 1144725 1145759 R COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase complement(1144725..1145759) Helicobacter pylori Gambia94/24 12360885 YP_005780795.1 CDS HPGAM_05635 NC_017371.1 1146680 1148215 D putative Outer membrane protein 1146680..1148215 Helicobacter pylori Gambia94/24 12360888 YP_005780796.1 CDS HPGAM_05640 NC_017371.1 1148233 1148985 D COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short chain alcohol dehydrogenase 1148233..1148985 Helicobacter pylori Gambia94/24 12360889 YP_005780797.1 CDS HPGAM_05645 NC_017371.1 1149189 1150061 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1149189..1150061) Helicobacter pylori Gambia94/24 12360890 YP_005780798.1 CDS HPGAM_05650 NC_017371.1 1150131 1150757 R COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase complement(1150131..1150757) Helicobacter pylori Gambia94/24 12360891 YP_005780799.1 CDS HPGAM_05655 NC_017371.1 1150776 1152602 R COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase complement(1150776..1152602) Helicobacter pylori Gambia94/24 12360892 YP_005780800.1 CDS HPGAM_05660 NC_017371.1 1152668 1153945 D COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1152668..1153945 Helicobacter pylori Gambia94/24 12360893 YP_005780801.1 CDS HPGAM_05665 NC_017371.1 1153956 1154639 D COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1153956..1154639 Helicobacter pylori Gambia94/24 12360894 YP_005780802.1 CDS glk NC_017371.1 1154626 1155636 D COG0837 Glucokinase; glucokinase 1154626..1155636 Helicobacter pylori Gambia94/24 12360895 YP_005780803.1 CDS HPGAM_05675 NC_017371.1 1155798 1156850 D COG1064 Zn-dependent alcohol dehydrogenases; zinc-dependent alcohol dehydrogenase 1155798..1156850 Helicobacter pylori Gambia94/24 12360896 YP_005780804.1 CDS HPGAM_05680 NC_017371.1 1156862 1158028 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein complement(1156862..1158028) Helicobacter pylori Gambia94/24 12360897 YP_005780805.1 CDS HPGAM_05685 NC_017371.1 1158162 1159358 R COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide biosynthesis protein complement(1158162..1159358) Helicobacter pylori Gambia94/24 12360898 YP_005780806.1 CDS HPGAM_05690 NC_017371.1 1159386 1159598 R hypothetical protein complement(1159386..1159598) Helicobacter pylori Gambia94/24 12360899 YP_005780807.1 CDS HPGAM_05695 NC_017371.1 1159546 1160853 D hypothetical protein 1159546..1160853 Helicobacter pylori Gambia94/24 12360900 YP_005780808.1 CDS HPGAM_05700 NC_017371.1 1160860 1161522 R putative Outer membrane protein complement(1160860..1161522) Helicobacter pylori Gambia94/24 12360901 YP_005780809.1 CDS HPGAM_05705 NC_017371.1 1161615 1161737 R hypothetical protein complement(1161615..1161737) Helicobacter pylori Gambia94/24 12360902 YP_005780810.1 CDS HPGAM_05710 NC_017371.1 1161811 1162371 D COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate flavodoxin oxidoreductase subunit gamma 1161811..1162371 Helicobacter pylori Gambia94/24 12360903 YP_005780811.1 CDS porD NC_017371.1 1162387 1162779 D COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; pyruvate flavodoxin oxidoreductase subunit delta 1162387..1162779 Helicobacter pylori Gambia94/24 12360904 YP_005780812.1 CDS porA NC_017371.1 1162789 1164012 D COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin oxidoreductase subunit alpha 1162789..1164012 Helicobacter pylori Gambia94/24 12360905 YP_005780813.1 CDS HPGAM_05725 NC_017371.1 1164025 1164969 D COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; pyruvate ferredoxin oxidoreductase subunit beta 1164025..1164969 Helicobacter pylori Gambia94/24 12360906 YP_005780814.1 CDS HPGAM_05730 NC_017371.1 1165075 1166397 D COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1165075..1166397 Helicobacter pylori Gambia94/24 12360907 YP_005780815.1 CDS HPGAM_05735 NC_017371.1 1166695 1167528 D putative Outer membrane protein 1166695..1167528 Helicobacter pylori Gambia94/24 12360908 YP_005780816.1 CDS HPGAM_05740 NC_017371.1 1167553 1169529 R COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B complement(1167553..1169529) Helicobacter pylori Gambia94/24 12360909 YP_005780817.1 CDS HPGAM_05745 NC_017371.1 1169578 1170315 R hypothetical protein complement(1169578..1170315) Helicobacter pylori Gambia94/24 12360910 YP_005780818.1 CDS HPGAM_05750 NC_017371.1 1170412 1173885 R hypothetical protein complement(1170412..1173885) Helicobacter pylori Gambia94/24 12360911 YP_005780819.1 CDS HPGAM_05755 NC_017371.1 1174069 1174230 D hypothetical protein 1174069..1174230 Helicobacter pylori Gambia94/24 12360912 YP_005780820.1 CDS HPGAM_05760 NC_017371.1 1174314 1175084 R COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein complement(1174314..1175084) Helicobacter pylori Gambia94/24 12360913 YP_005780821.1 CDS HPGAM_05765 NC_017371.1 1175325 1177028 R COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase complement(1175325..1177028) Helicobacter pylori Gambia94/24 12360914 YP_005780822.1 CDS flgK NC_017371.1 1177216 1179036 R COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK complement(1177216..1179036) Helicobacter pylori Gambia94/24 12360915 YP_005780823.1 CDS HPGAM_05775 NC_017371.1 1179038 1179472 R hypothetical protein complement(1179038..1179472) Helicobacter pylori Gambia94/24 12360916 YP_005780824.1 CDS HPGAM_05780 NC_017371.1 1179604 1180560 R COG0270 Site-specific DNA methylase; type II DNA modification (methyltransferase) complement(1179604..1180560) Helicobacter pylori Gambia94/24 12360917 YP_005780825.1 CDS HPGAM_05785 NC_017371.1 1180704 1180907 R hypothetical protein complement(1180704..1180907) Helicobacter pylori Gambia94/24 12360918 YP_005780826.1 CDS HPGAM_05790 NC_017371.1 1180976 1181182 R hypothetical protein complement(1180976..1181182) Helicobacter pylori Gambia94/24 12360919 YP_005780827.1 CDS HPGAM_05795 NC_017371.1 1181217 1181774 R COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase slyD complement(1181217..1181774) Helicobacter pylori Gambia94/24 12360920 YP_005780828.1 CDS HPGAM_05800 NC_017371.1 1181761 1182756 R hypothetical protein complement(1181761..1182756) Helicobacter pylori Gambia94/24 12360921 YP_005780829.1 CDS HPGAM_05805 NC_017371.1 1182764 1183303 R COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein complement(1182764..1183303) Helicobacter pylori Gambia94/24 12360922 YP_005780830.1 CDS tolB NC_017371.1 1183370 1184623 R COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB complement(1183370..1184623) Helicobacter pylori Gambia94/24 12360923 YP_005780831.1 CDS HPGAM_05815 NC_017371.1 1184620 1185414 R hypothetical protein complement(1184620..1185414) Helicobacter pylori Gambia94/24 12360924 YP_005780832.1 CDS HPGAM_05820 NC_017371.1 1185433 1185834 R COG0848 Biopolymer transport protein; biopolymer transport protein complement(1185433..1185834) Helicobacter pylori Gambia94/24 12360925 YP_005780833.1 CDS HPGAM_05825 NC_017371.1 1185878 1186456 R COG0811 Biopolymer transport proteins; biopolymer transport protein complement(1185878..1186456) Helicobacter pylori Gambia94/24 12360926 YP_005780834.1 CDS atpC NC_017371.1 1186468 1186839 R COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon complement(1186468..1186839) Helicobacter pylori Gambia94/24 12360927 YP_005780835.1 CDS HPGAM_05835 NC_017371.1 1186850 1188259 R COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta complement(1186850..1188259) Helicobacter pylori Gambia94/24 12360928 YP_005780836.1 CDS HPGAM_05840 NC_017371.1 1188281 1189186 R COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma complement(1188281..1189186) Helicobacter pylori Gambia94/24 12360929 YP_005780837.1 CDS HPGAM_05845 NC_017371.1 1189201 1190712 R COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha complement(1189201..1190712) Helicobacter pylori Gambia94/24 12360930 YP_005780838.1 CDS HPGAM_05850 NC_017371.1 1190735 1191277 R F0F1 ATP synthase subunit delta complement(1190735..1191277) Helicobacter pylori Gambia94/24 12360931 YP_005780839.1 CDS HPGAM_05855 NC_017371.1 1191278 1191793 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B complement(1191278..1191793) Helicobacter pylori Gambia94/24 12360932 YP_005780840.1 CDS HPGAM_05860 NC_017371.1 1191797 1192231 R COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B' complement(1191797..1192231) Helicobacter pylori Gambia94/24 12360933 YP_005780841.1 CDS HPGAM_05865 NC_017371.1 1192336 1193208 R COG1475 Predicted transcriptional regulators; plasmid replication-partition related protein complement(1192336..1193208) Helicobacter pylori Gambia94/24 12360934 YP_005780842.1 CDS HPGAM_05870 NC_017371.1 1193212 1194006 R COG1192 ATPases involved in chromosome partitioning; hypothetical protein complement(1193212..1194006) Helicobacter pylori Gambia94/24 12360935 YP_005780843.1 CDS HPGAM_05875 NC_017371.1 1194009 1194647 R COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase complement(1194009..1194647) Helicobacter pylori Gambia94/24 12360936 YP_005780844.1 CDS fmt NC_017371.1 1194644 1195561 R COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase complement(1194644..1195561) Helicobacter pylori Gambia94/24 12360937 YP_005780845.1 CDS HPGAM_05885 NC_017371.1 1195576 1197849 R COG4694 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1195576..1197849) Helicobacter pylori Gambia94/24 12360938 YP_005780846.1 CDS HPGAM_05890 NC_017371.1 1197893 1199185 R COG4487 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1197893..1199185) Helicobacter pylori Gambia94/24 12360939 YP_005780847.1 CDS HPGAM_05905 NC_017371.1 1202760 1202870 R hypothetical protein complement(1202760..1202870) Helicobacter pylori Gambia94/24 12360941 YP_005780848.1 CDS HPGAM_05910 NC_017371.1 1203073 1203789 R COG1432 Uncharacterized conserved protein; hypothetical protein complement(1203073..1203789) Helicobacter pylori Gambia94/24 12360942 YP_005780849.1 CDS HPGAM_05915 NC_017371.1 1204147 1204314 D hypothetical protein 1204147..1204314 Helicobacter pylori Gambia94/24 12360943 YP_005780850.1 CDS rplS NC_017371.1 1204383 1204739 R COG0335 Ribosomal protein L19; 50S ribosomal protein L19 complement(1204383..1204739) Helicobacter pylori Gambia94/24 12360944 YP_005780851.1 CDS trmD NC_017371.1 1204761 1205450 R COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase complement(1204761..1205450) Helicobacter pylori Gambia94/24 12360945 YP_005780852.1 CDS rimM NC_017371.1 1205451 1206005 R COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM complement(1205451..1206005) Helicobacter pylori Gambia94/24 12360946 YP_005780853.1 CDS HPGAM_05935 NC_017371.1 1206006 1206359 R COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein complement(1206006..1206359) Helicobacter pylori Gambia94/24 12360947 YP_005780854.1 CDS rpsP NC_017371.1 1206376 1206606 R COG0228 Ribosomal protein S16; 30S ribosomal protein S16 complement(1206376..1206606) Helicobacter pylori Gambia94/24 12360948 YP_005780855.1 CDS HPGAM_05945 NC_017371.1 1206680 1208026 R COG0541 Signal recognition particle GTPase; signal recognition particle protein complement(1206680..1208026) Helicobacter pylori Gambia94/24 12360949 YP_005780856.1 CDS valS NC_017371.1 1208041 1210659 R COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase complement(1208041..1210659) Helicobacter pylori Gambia94/24 12360950 YP_005780857.1 CDS HPGAM_05955 NC_017371.1 1210811 1211218 D COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1210811..1211218 Helicobacter pylori Gambia94/24 12360951 YP_005780858.1 CDS murG NC_017371.1 1211229 1212290 D COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1211229..1212290 Helicobacter pylori Gambia94/24 12360952 YP_005780859.1 CDS HPGAM_05965 NC_017371.1 1212334 1212432 R hypothetical protein complement(1212334..1212432) Helicobacter pylori Gambia94/24 12360953 YP_005780860.1 CDS HPGAM_05970 NC_017371.1 1212398 1214494 D outer membrane protein HopI 1212398..1214494 Helicobacter pylori Gambia94/24 12360954 YP_005780861.1 CDS HPGAM_05975 NC_017371.1 1214518 1218192 D putative Outer membrane protein 1214518..1218192 Helicobacter pylori Gambia94/24 12360955 YP_005780862.1 CDS HPGAM_05980 NC_017371.1 1218205 1219002 D COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1218205..1219002 Helicobacter pylori Gambia94/24 12360956 YP_005780863.1 CDS HPGAM_05995 NC_017371.1 1219767 1220192 R COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein complement(1219767..1220192) Helicobacter pylori Gambia94/24 12360957 YP_005780864.1 CDS HPGAM_06000 NC_017371.1 1220249 1220743 R COG0716 Flavodoxins; flavodoxin FldA complement(1220249..1220743) Helicobacter pylori Gambia94/24 12360958 YP_005780865.1 CDS HPGAM_06005 NC_017371.1 1220835 1221416 R COG0586 Uncharacterized membrane-associated protein; hypothetical protein complement(1220835..1221416) Helicobacter pylori Gambia94/24 12360959 YP_005780866.1 CDS HPGAM_06010 NC_017371.1 1221554 1221751 D COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cation transport subunit forcbb3-type oxidase 1221554..1221751 Helicobacter pylori Gambia94/24 12360960 YP_005780867.1 CDS HPGAM_06015 NC_017371.1 1221777 1222751 D COG0492 Thioredoxin reductase; thioredoxin reductase 1221777..1222751 Helicobacter pylori Gambia94/24 12360961 YP_005780868.1 CDS HPGAM_06020 NC_017371.1 1222758 1223918 R COG0477 Permeases of the major facilitator superfamily; tetracycline resistance proteintet A (P ) complement(1222758..1223918) Helicobacter pylori Gambia94/24 12360962 YP_005780869.1 CDS pgi NC_017371.1 1223982 1225619 D COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1223982..1225619 Helicobacter pylori Gambia94/24 12360963 YP_005780870.1 CDS HPGAM_06030 NC_017371.1 1225925 1227340 D Outer membrane protein HofH; putative signal peptide 1225925..1227340 Helicobacter pylori Gambia94/24 12360964 YP_005780871.1 CDS HPGAM_06035 NC_017371.1 1227647 1227751 D hypothetical protein 1227647..1227751 Helicobacter pylori Gambia94/24 12360965 YP_005780872.1 CDS HPGAM_06040 NC_017371.1 1227861 1229924 R COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein complement(1227861..1229924) Helicobacter pylori Gambia94/24 12360966 YP_005780873.1 CDS HPGAM_06045 NC_017371.1 1230133 1230786 D COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease 1230133..1230786 Helicobacter pylori Gambia94/24 12360967 YP_005780874.1 CDS HPGAM_06050 NC_017371.1 1230788 1231459 D COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1230788..1231459 Helicobacter pylori Gambia94/24 12360968 YP_005780875.1 CDS HPGAM_06055 NC_017371.1 1231461 1232207 D COG1126 ABC-type polar amino acid transport system, ATPase component; phosphate ABC transporter ATP-binding protein 1231461..1232207 Helicobacter pylori Gambia94/24 12360969 YP_005780876.1 CDS HPGAM_06060 NC_017371.1 1232256 1233089 D COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter 1232256..1233089 Helicobacter pylori Gambia94/24 12360970 YP_005780877.1 CDS HPGAM_06065 NC_017371.1 1233210 1233767 D hypothetical protein 1233210..1233767 Helicobacter pylori Gambia94/24 12360971 YP_005780878.1 CDS HPGAM_06070 NC_017371.1 1233997 1235220 R COG0738 Fucose permease; glucose/galactose transporter complement(1233997..1235220) Helicobacter pylori Gambia94/24 12360972 YP_005780879.1 CDS HPGAM_06075 NC_017371.1 1235349 1236656 R COG2252 Permeases; hypothetical protein complement(1235349..1236656) Helicobacter pylori Gambia94/24 12360973 YP_005780880.1 CDS HPGAM_06080 NC_017371.1 1236842 1236994 D hypothetical protein 1236842..1236994 Helicobacter pylori Gambia94/24 12360974 YP_005780881.1 CDS HPGAM_06085 NC_017371.1 1236991 1237086 D hypothetical protein 1236991..1237086 Helicobacter pylori Gambia94/24 12360975 YP_005780882.1 CDS HPGAM_06090 NC_017371.1 1237098 1239002 R Outer membrane protein HopQ; putative signal peptide complement(1237098..1239002) Helicobacter pylori Gambia94/24 12360976 YP_005780883.1 CDS HPGAM_06095 NC_017371.1 1239250 1239342 D hypothetical protein 1239250..1239342 Helicobacter pylori Gambia94/24 12360977 YP_005780884.1 CDS HPGAM_06100 NC_017371.1 1239378 1239473 D hypothetical protein 1239378..1239473 Helicobacter pylori Gambia94/24 12360978 YP_005780885.1 CDS HPGAM_06105 NC_017371.1 1239481 1240182 R COG0813 Purine-nucleoside phosphorylase; purine-nucleoside phosphorylase complement(1239481..1240182) Helicobacter pylori Gambia94/24 12360979 YP_005780886.1 CDS HPGAM_06110 NC_017371.1 1240179 1241420 R COG1015 Phosphopentomutase; phosphopentomutase complement(1240179..1241420) Helicobacter pylori Gambia94/24 12360980 YP_005780887.1 CDS HPGAM_06115 NC_017371.1 1241432 1242688 R COG1972 Nucleoside permease; putative nucleoside transporter complement(1241432..1242688) Helicobacter pylori Gambia94/24 12360981 YP_005780888.1 CDS HPGAM_06120 NC_017371.1 1243012 1244343 D COG0477 Permeases of the major facilitator superfamily; multidrug-efflux transporter 1243012..1244343 Helicobacter pylori Gambia94/24 12360983 YP_005780889.1 CDS HPGAM_06125 NC_017371.1 1244363 1245124 D COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 1244363..1245124 Helicobacter pylori Gambia94/24 12360984 YP_005780890.1 CDS HPGAM_06130 NC_017371.1 1245134 1246285 R COG0475 Kef-type K+ transport systems, membrane components; putative Na+/H+ antiporter complement(1245134..1246285) Helicobacter pylori Gambia94/24 12360985 YP_005780891.1 CDS HPGAM_06135 NC_017371.1 1246311 1247690 R COG0534 Na+-driven multidrug efflux pump; hypothetical protein complement(1246311..1247690) Helicobacter pylori Gambia94/24 12360986 YP_005780892.1 CDS HPGAM_06140 NC_017371.1 1247664 1247801 D hypothetical protein 1247664..1247801 Helicobacter pylori Gambia94/24 12360987 YP_005780893.1 CDS HPGAM_06145 NC_017371.1 1247851 1249026 R COG2814 Arabinose efflux permease; putative arabinose transporter complement(1247851..1249026) Helicobacter pylori Gambia94/24 12360988 YP_005780894.1 CDS HPGAM_06150 NC_017371.1 1249304 1250047 D COG3338 Carbonic anhydrase; Alpha-carbonic anhydrase; putative signal peptide 1249304..1250047 Helicobacter pylori Gambia94/24 12360989 YP_005780895.1 CDS HPGAM_06155 NC_017371.1 1250287 1251327 R hypothetical protein complement(1250287..1251327) Helicobacter pylori Gambia94/24 12360990 YP_005780896.1 CDS HPGAM_06160 NC_017371.1 1251785 1252825 R COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase complement(1251785..1252825) Helicobacter pylori Gambia94/24 12360991 YP_005780897.1 CDS hisS NC_017371.1 1252812 1254140 R COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase complement(1252812..1254140) Helicobacter pylori Gambia94/24 12360992 YP_005780898.1 CDS HPGAM_06170 NC_017371.1 1254202 1255251 D COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase II 1254202..1255251 Helicobacter pylori Gambia94/24 12360993 YP_005780899.1 CDS HPGAM_06175 NC_017371.1 1255385 1255819 R hypothetical protein complement(1255385..1255819) Helicobacter pylori Gambia94/24 12360994 YP_005780900.1 CDS HPGAM_06180 NC_017371.1 1256372 1258450 R COG0480 Translation elongation factors (GTPases); elongation factor G complement(1256372..1258450) Helicobacter pylori Gambia94/24 12360995 YP_005780901.1 CDS HPGAM_06185 NC_017371.1 1258462 1258929 R COG0049 Ribosomal protein S7; 30S ribosomal protein S7 complement(1258462..1258929) Helicobacter pylori Gambia94/24 12360996 YP_005780902.1 CDS rpsL NC_017371.1 1258945 1259352 R COG0048 Ribosomal protein S12; 30S ribosomal protein S12 complement(1258945..1259352) Helicobacter pylori Gambia94/24 12360997 YP_005780903.1 CDS HPGAM_06195 NC_017371.1 1259441 1268113 R COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; bifunctional DNA-directed RNA polymerase subunit beta/beta' complement(1259441..1268113) Helicobacter pylori Gambia94/24 12360998 YP_005780904.1 CDS rplL NC_017371.1 1268334 1268711 R COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 complement(1268334..1268711) Helicobacter pylori Gambia94/24 12360999 YP_005780905.1 CDS rplJ NC_017371.1 1268754 1269248 R COG0244 Ribosomal protein L10; 50S ribosomal protein L10 complement(1268754..1269248) Helicobacter pylori Gambia94/24 12361000 YP_005780906.1 CDS rplA NC_017371.1 1269357 1270061 R COG0081 Ribosomal protein L1; 50S ribosomal protein L1 complement(1269357..1270061) Helicobacter pylori Gambia94/24 12361001 YP_005780907.1 CDS rplK NC_017371.1 1270113 1270538 R COG0080 Ribosomal protein L11; 50S ribosomal protein L11 complement(1270113..1270538) Helicobacter pylori Gambia94/24 12361002 YP_005780908.1 CDS nusG NC_017371.1 1270556 1271083 R COG0250 Transcription antiterminator; transcription antitermination protein NusG complement(1270556..1271083) Helicobacter pylori Gambia94/24 12361003 YP_005780909.1 CDS secE NC_017371.1 1271113 1271292 R preprotein translocase subunit SecE complement(1271113..1271292) Helicobacter pylori Gambia94/24 12361004 YP_005780910.1 CDS rpmG NC_017371.1 1271547 1271705 R COG0267 Ribosomal protein L33; 50S ribosomal protein L33 complement(1271547..1271705) Helicobacter pylori Gambia94/24 12361006 YP_005780911.1 CDS HPGAM_06235 NC_017371.1 1271762 1272961 R COG0050 GTPases - translation elongation factors; elongation factor Tu complement(1271762..1272961) Helicobacter pylori Gambia94/24 12361007 YP_005780912.1 CDS HPGAM_06240 NC_017371.1 1273664 1275400 D COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter ATP-binding protein 1273664..1275400 Helicobacter pylori Gambia94/24 12361012 YP_005780913.1 CDS HPGAM_06245 NC_017371.1 1275411 1276079 R COG0546 Predicted phosphatases; hypothetical protein complement(1275411..1276079) Helicobacter pylori Gambia94/24 12361013 YP_005780914.1 CDS HPGAM_06250 NC_017371.1 1276267 1277256 R COG3392 Adenine-specific DNA methylase; Site-specific DNA-methyltransferase complement(1276267..1277256) Helicobacter pylori Gambia94/24 12361014 YP_005780915.1 CDS HPGAM_06255 NC_017371.1 1277588 1277872 R hypothetical protein complement(1277588..1277872) Helicobacter pylori Gambia94/24 12361015 YP_005780916.1 CDS HPGAM_06260 NC_017371.1 1278156 1278671 R COG1045 Serine acetyltransferase; serine acetyltransferase complement(1278156..1278671) Helicobacter pylori Gambia94/24 12361016 YP_005780917.1 CDS HPGAM_06265 NC_017371.1 1279248 1279565 R COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C complement(1279248..1279565) Helicobacter pylori Gambia94/24 12361022 YP_005780918.1 CDS HPGAM_06270 NC_017371.1 1279698 1281764 R COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase complement(1279698..1281764) Helicobacter pylori Gambia94/24 12361024 YP_005780919.1 CDS HPGAM_06275 NC_017371.1 1281767 1282471 R COG1926 Predicted phosphoribosyltransferases; hypothetical protein complement(1281767..1282471) Helicobacter pylori Gambia94/24 12361025 YP_005780920.1 CDS HPGAM_06280 NC_017371.1 1282486 1284747 R COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein complement(1282486..1284747) Helicobacter pylori Gambia94/24 12361026 YP_005780921.1 CDS HPGAM_06285 NC_017371.1 1284750 1285229 R hypothetical protein complement(1284750..1285229) Helicobacter pylori Gambia94/24 12361027 YP_005780922.1 CDS HPGAM_06290 NC_017371.1 1285278 1286552 R COG0151 Phosphoribosylamine-glycine ligase; glycinamide ribonucleotide synthetase complement(1285278..1286552) Helicobacter pylori Gambia94/24 12361028 YP_005780923.1 CDS HPGAM_06295 NC_017371.1 1286867 1287553 R COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein complement(1286867..1287553) Helicobacter pylori Gambia94/24 12361029 YP_005780924.1 CDS HPGAM_06300 NC_017371.1 1287547 1288251 R COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase complement(1287547..1288251) Helicobacter pylori Gambia94/24 12361031 YP_005780925.1 CDS HPGAM_06305 NC_017371.1 1288291 1291131 R COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase complement(1288291..1291131) Helicobacter pylori Gambia94/24 12361033 YP_005780926.1 CDS HPGAM_06310 NC_017371.1 1291203 1291541 D COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 1291203..1291541 Helicobacter pylori Gambia94/24 12361034 YP_005780927.1 CDS hemD NC_017371.1 1291544 1292224 D COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 1291544..1292224 Helicobacter pylori Gambia94/24 12361035 YP_005780928.1 CDS HPGAM_06320 NC_017371.1 1292271 1292663 D COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 1292271..1292663 Helicobacter pylori Gambia94/24 12361036 YP_005780929.1 CDS HPGAM_06325 NC_017371.1 1292714 1293751 R COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase complement(1292714..1293751) Helicobacter pylori Gambia94/24 12361037 YP_005780930.1 CDS HPGAM_06330 NC_017371.1 1293847 1294137 D COG2863 Cytochrome c553; cytochrome c-553 1293847..1294137 Helicobacter pylori Gambia94/24 12361038 YP_005780931.1 CDS HPGAM_06335 NC_017371.1 1294130 1294222 R hypothetical protein complement(1294130..1294222) Helicobacter pylori Gambia94/24 12361039 YP_005780932.1 CDS HPGAM_06340 NC_017371.1 1294298 1294771 D COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 1294298..1294771 Helicobacter pylori Gambia94/24 12361040 YP_005780933.1 CDS HPGAM_06345 NC_017371.1 1294765 1295982 D COG0527 Aspartokinases; aspartate kinase 1294765..1295982 Helicobacter pylori Gambia94/24 12361041 YP_005780934.1 CDS HPGAM_06350 NC_017371.1 1295979 1296521 D hypothetical protein 1295979..1296521 Helicobacter pylori Gambia94/24 12361042 YP_005780935.1 CDS HPGAM_06355 NC_017371.1 1296518 1297174 D COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1296518..1297174 Helicobacter pylori Gambia94/24 12361043 YP_005780936.1 CDS HPGAM_06360 NC_017371.1 1297171 1298313 D COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1297171..1298313 Helicobacter pylori Gambia94/24 12361044 YP_005780937.1 CDS HPGAM_06365 NC_017371.1 1298408 1298869 R hypothetical protein complement(1298408..1298869) Helicobacter pylori Gambia94/24 12361045 YP_005780938.1 CDS HPGAM_06370 NC_017371.1 1298870 1299166 D hypothetical protein 1298870..1299166 Helicobacter pylori Gambia94/24 12361046 YP_005780939.1 CDS HPGAM_06375 NC_017371.1 1299220 1300128 D COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative membrane transport protein 1299220..1300128 Helicobacter pylori Gambia94/24 12361047 YP_005780940.1 CDS HPGAM_06380 NC_017371.1 1300119 1301366 D hypothetical protein 1300119..1301366 Helicobacter pylori Gambia94/24 12361048 YP_005780941.1 CDS HPGAM_06385 NC_017371.1 1301445 1301996 D COG2952 Uncharacterized protein conserved in bacteria; hypothetical protein 1301445..1301996 Helicobacter pylori Gambia94/24 12361049 YP_005780942.1 CDS HPGAM_06390 NC_017371.1 1301996 1303123 D COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 1301996..1303123 Helicobacter pylori Gambia94/24 12361050 YP_005780943.1 CDS amiF NC_017371.1 1303289 1304293 D COG0388 Predicted amidohydrolase; formamidase 1303289..1304293 Helicobacter pylori Gambia94/24 12361051 YP_005780944.1 CDS HPGAM_06400 NC_017371.1 1304372 1304629 R hypothetical protein complement(1304372..1304629) Helicobacter pylori Gambia94/24 12361052 YP_005780945.1 CDS HPGAM_06405 NC_017371.1 1304777 1305253 R hypothetical protein complement(1304777..1305253) Helicobacter pylori Gambia94/24 12361053 YP_005780946.1 CDS HPGAM_06410 NC_017371.1 1305369 1305941 R COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein complement(1305369..1305941) Helicobacter pylori Gambia94/24 12361054 YP_005780947.1 CDS alaS NC_017371.1 1305943 1308486 R COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase complement(1305943..1308486) Helicobacter pylori Gambia94/24 12361055 YP_005780948.1 CDS HPGAM_06420 NC_017371.1 1308605 1308835 D COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein 1308605..1308835 Helicobacter pylori Gambia94/24 12361056 YP_005780949.1 CDS HPGAM_06425 NC_017371.1 1309577 1309792 R hypothetical protein complement(1309577..1309792) Helicobacter pylori Gambia94/24 12361057 YP_005780950.1 CDS HPGAM_06430 NC_017371.1 1310164 1312215 R outer membrane protein - adhesin complement(1310164..1312215) Helicobacter pylori Gambia94/24 12361058 YP_005780951.1 CDS HPGAM_06435 NC_017371.1 1312343 1312441 D hypothetical protein 1312343..1312441 Helicobacter pylori Gambia94/24 12361059 YP_005780952.1 CDS rpsR NC_017371.1 1312571 1312828 R COG0238 Ribosomal protein S18; 30S ribosomal protein S18 complement(1312571..1312828) Helicobacter pylori Gambia94/24 12361060 YP_005780953.1 CDS HPGAM_06445 NC_017371.1 1312851 1313396 R COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein complement(1312851..1313396) Helicobacter pylori Gambia94/24 12361061 YP_005780954.1 CDS rpsF NC_017371.1 1313406 1313834 R COG0360 Ribosomal protein S6; 30S ribosomal protein S6 complement(1313406..1313834) Helicobacter pylori Gambia94/24 12361062 YP_005780955.1 CDS HPGAM_06455 NC_017371.1 1313987 1315009 R DNA polymerase III subunit delta complement(1313987..1315009) Helicobacter pylori Gambia94/24 12361063 YP_005780956.1 CDS HPGAM_06460 NC_017371.1 1314999 1316933 R COG0557 Exoribonuclease R; ribonuclease R complement(1314999..1316933) Helicobacter pylori Gambia94/24 12361064 YP_005780957.1 CDS aroE NC_017371.1 1316933 1317724 R COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase complement(1316933..1317724) Helicobacter pylori Gambia94/24 12361065 YP_005780958.1 CDS HPGAM_06470 NC_017371.1 1317732 1318310 R hypothetical protein complement(1317732..1318310) Helicobacter pylori Gambia94/24 12361066 YP_005780959.1 CDS HPGAM_06475 NC_017371.1 1318319 1319365 R COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide ABC transporter permease complement(1318319..1319365) Helicobacter pylori Gambia94/24 12361067 YP_005780960.1 CDS HPGAM_06480 NC_017371.1 1319362 1321149 R COG4166 ABC-type oligopeptide transport system, periplasmic component; hypothetical protein complement(1319362..1321149) Helicobacter pylori Gambia94/24 12361068 YP_005780961.1 CDS HPGAM_06485 NC_017371.1 1321150 1322130 R COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase complement(1321150..1322130) Helicobacter pylori Gambia94/24 12361069 YP_005780962.1 CDS HPGAM_06490 NC_017371.1 1322201 1322938 R COG0500 SAM-dependent methyltransferases; hypothetical protein complement(1322201..1322938) Helicobacter pylori Gambia94/24 12361070 YP_005780963.1 CDS secG NC_017371.1 1323061 1323663 D COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1323061..1323663 Helicobacter pylori Gambia94/24 12361071 YP_005780964.1 CDS frr NC_017371.1 1323663 1324220 D COG0233 Ribosome recycling factor; ribosome recycling factor 1323663..1324220 Helicobacter pylori Gambia94/24 12361072 YP_005780965.1 CDS pyrE NC_017371.1 1324224 1324829 D COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1324224..1324829 Helicobacter pylori Gambia94/24 12361073 YP_005780966.1 CDS HPGAM_06510 NC_017371.1 1324819 1325283 D COG1714 Predicted membrane protein/domain; hypothetical protein 1324819..1325283 Helicobacter pylori Gambia94/24 12361074 YP_005780967.1 CDS HPGAM_06515 NC_017371.1 1325280 1325984 D COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 1325280..1325984 Helicobacter pylori Gambia94/24 12361075 YP_005780968.1 CDS HPGAM_06520 NC_017371.1 1326077 1326478 D COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1326077..1326478 Helicobacter pylori Gambia94/24 12361076 YP_005780969.1 CDS HPGAM_06525 NC_017371.1 1326478 1326957 D COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1326478..1326957 Helicobacter pylori Gambia94/24 12361077 YP_005780970.1 CDS HPGAM_06530 NC_017371.1 1326957 1327106 D NADH dehydrogenase subunit C 1326957..1327106 Helicobacter pylori Gambia94/24 12361078 YP_005780971.1 CDS HPGAM_06535 NC_017371.1 1327111 1327908 D COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C 1327111..1327908 Helicobacter pylori Gambia94/24 12361079 YP_005780972.1 CDS HPGAM_06540 NC_017371.1 1327910 1329139 D COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D 1327910..1329139 Helicobacter pylori Gambia94/24 12361080 YP_005780973.1 CDS HPGAM_06545 NC_017371.1 1329136 1329366 D NADH dehydrogenase I subunit E 1329136..1329366 Helicobacter pylori Gambia94/24 12361081 YP_005780974.1 CDS HPGAM_06550 NC_017371.1 1329369 1330349 D NADH-ubiquinone oxidoreductase subunit F 1329369..1330349 Helicobacter pylori Gambia94/24 12361082 YP_005780975.1 CDS HPGAM_06555 NC_017371.1 1330346 1332880 D COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1330346..1332880 Helicobacter pylori Gambia94/24 12361083 YP_005780976.1 CDS HPGAM_06560 NC_017371.1 1332877 1333866 D COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 1332877..1333866 Helicobacter pylori Gambia94/24 12361084 YP_005780977.1 CDS HPGAM_06565 NC_017371.1 1333877 1334536 D COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1333877..1334536 Helicobacter pylori Gambia94/24 12361085 YP_005780978.1 CDS HPGAM_06570 NC_017371.1 1334529 1335077 D COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 1334529..1335077 Helicobacter pylori Gambia94/24 12361086 YP_005780979.1 CDS HPGAM_06575 NC_017371.1 1335074 1335376 D COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 1335074..1335376 Helicobacter pylori Gambia94/24 12361087 YP_005780980.1 CDS HPGAM_06580 NC_017371.1 1335379 1337217 D COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 1335379..1337217 Helicobacter pylori Gambia94/24 12361088 YP_005780981.1 CDS HPGAM_06585 NC_017371.1 1337221 1338759 D COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 1337221..1338759 Helicobacter pylori Gambia94/24 12361089 YP_005780982.1 CDS HPGAM_06590 NC_017371.1 1338746 1340224 D COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 1338746..1340224 Helicobacter pylori Gambia94/24 12361090 YP_005780983.1 CDS HPGAM_06595 NC_017371.1 1340214 1342625 D COG1729 Uncharacterized protein conserved in bacteria; flagellar functional protein 1340214..1342625 Helicobacter pylori Gambia94/24 12361091 YP_005780984.1 CDS HPGAM_06600 NC_017371.1 1342626 1344005 D COG1109 Phosphomannomutase; phosphomannomutase 1342626..1344005 Helicobacter pylori Gambia94/24 12361092 YP_005780985.1 CDS HPGAM_06605 NC_017371.1 1344184 1344555 D hypothetical protein 1344184..1344555 Helicobacter pylori Gambia94/24 12361093 YP_005780986.1 CDS trpA NC_017371.1 1344734 1345522 R COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha complement(1344734..1345522) Helicobacter pylori Gambia94/24 12361094 YP_005780987.1 CDS HPGAM_06615 NC_017371.1 1345519 1346700 R COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta complement(1345519..1346700) Helicobacter pylori Gambia94/24 12361095 YP_005780988.1 CDS HPGAM_06620 NC_017371.1 1346702 1348060 R COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase complement(1346702..1348060) Helicobacter pylori Gambia94/24 12361096 YP_005780989.1 CDS trpD NC_017371.1 1348053 1349060 R COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase complement(1348053..1349060) Helicobacter pylori Gambia94/24 12361097 YP_005780990.1 CDS HPGAM_06630 NC_017371.1 1349057 1349641 R COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II complement(1349057..1349641) Helicobacter pylori Gambia94/24 12361098 YP_005780991.1 CDS HPGAM_06635 NC_017371.1 1349638 1351140 R COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I complement(1349638..1351140) Helicobacter pylori Gambia94/24 12361099 YP_005780992.1 CDS HPGAM_06640 NC_017371.1 1351308 1352366 R COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein complement(1351308..1352366) Helicobacter pylori Gambia94/24 12361100 YP_005780993.1 CDS HPGAM_06645 NC_017371.1 1352434 1353126 R COG2503 Predicted secreted acid phosphatase; hypothetical protein complement(1352434..1353126) Helicobacter pylori Gambia94/24 12361101 YP_005780994.1 CDS HPGAM_06650 NC_017371.1 1353295 1353843 D COG2353 Uncharacterized conserved protein; hypothetical protein 1353295..1353843 Helicobacter pylori Gambia94/24 12361102 YP_005780995.1 CDS HPGAM_06655 NC_017371.1 1353908 1354561 R COG0819 Putative transcription activator; transcriptional regulator (tenA) complement(1353908..1354561) Helicobacter pylori Gambia94/24 12361103 YP_005780996.1 CDS HPGAM_06660 NC_017371.1 1355283 1355648 D hypothetical protein 1355283..1355648 Helicobacter pylori Gambia94/24 12361104 YP_005780997.1 CDS HPGAM_06665 NC_017371.1 1355688 1356164 D hypothetical protein 1355688..1356164 Helicobacter pylori Gambia94/24 12361105 YP_005780998.1 CDS HPGAM_06670 NC_017371.1 1356341 1357003 D COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter 1356341..1357003 Helicobacter pylori Gambia94/24 12361106 YP_005780999.1 CDS HPGAM_06675 NC_017371.1 1356991 1357605 D COG1564 Thiamine pyrophosphokinase; thiamine pyrophosphokinase 1356991..1357605 Helicobacter pylori Gambia94/24 12361107 YP_005781000.1 CDS rplQ NC_017371.1 1358401 1358751 R COG0203 Ribosomal protein L17; 50S ribosomal protein L17 complement(1358401..1358751) Helicobacter pylori Gambia94/24 12361108 YP_005781001.1 CDS HPGAM_06685 NC_017371.1 1358751 1359785 R COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha complement(1358751..1359785) Helicobacter pylori Gambia94/24 12361109 YP_005781002.1 CDS rpsD NC_017371.1 1359797 1360423 R COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 complement(1359797..1360423) Helicobacter pylori Gambia94/24 12361110 YP_005781003.1 CDS HPGAM_06695 NC_017371.1 1360433 1360828 R COG0100 Ribosomal protein S11; 30S ribosomal protein S11 complement(1360433..1360828) Helicobacter pylori Gambia94/24 12361111 YP_005781004.1 CDS rpsM NC_017371.1 1360851 1361213 R COG0099 Ribosomal protein S13; 30S ribosomal protein S13 complement(1360851..1361213) Helicobacter pylori Gambia94/24 12361112 YP_005781005.1 CDS HPGAM_06705 NC_017371.1 1361217 1361330 R COG0257 Ribosomal protein L36; hypothetical protein complement(1361217..1361330) Helicobacter pylori Gambia94/24 12361113 YP_005781006.1 CDS infA NC_017371.1 1361408 1361626 R COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 complement(1361408..1361626) Helicobacter pylori Gambia94/24 12361114 YP_005781007.1 CDS HPGAM_06715 NC_017371.1 1361626 1362387 R COG0024 Methionine aminopeptidase; methionine aminopeptidase complement(1361626..1362387) Helicobacter pylori Gambia94/24 12361115 YP_005781008.1 CDS secY NC_017371.1 1362387 1363649 R COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY complement(1362387..1363649) Helicobacter pylori Gambia94/24 12361116 YP_005781009.1 CDS rplO NC_017371.1 1363689 1364090 R COG0200 Ribosomal protein L15; 50S ribosomal protein L15 complement(1363689..1364090) Helicobacter pylori Gambia94/24 12361117 YP_005781010.1 CDS rpsE NC_017371.1 1364108 1364569 R COG0098 Ribosomal protein S5; 30S ribosomal protein S5 complement(1364108..1364569) Helicobacter pylori Gambia94/24 12361118 YP_005781011.1 CDS rplR NC_017371.1 1364566 1364922 R COG0256 Ribosomal protein L18; 50S ribosomal protein L18 complement(1364566..1364922) Helicobacter pylori Gambia94/24 12361119 YP_005781012.1 CDS rplF NC_017371.1 1364936 1365472 R COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 complement(1364936..1365472) Helicobacter pylori Gambia94/24 12361120 YP_005781013.1 CDS rpsH NC_017371.1 1365483 1365878 R COG0096 Ribosomal protein S8; 30S ribosomal protein S8 complement(1365483..1365878) Helicobacter pylori Gambia94/24 12361121 YP_005781014.1 CDS rpsN NC_017371.1 1365888 1366073 R COG0199 Ribosomal protein S14; 30S ribosomal protein S14 complement(1365888..1366073) Helicobacter pylori Gambia94/24 12361122 YP_005781015.1 CDS rplE NC_017371.1 1366083 1366628 R COG0094 Ribosomal protein L5; 50S ribosomal protein L5 complement(1366083..1366628) Helicobacter pylori Gambia94/24 12361123 YP_005781016.1 CDS rplX NC_017371.1 1366642 1366863 R COG0198 Ribosomal protein L24; 50S ribosomal protein L24 complement(1366642..1366863) Helicobacter pylori Gambia94/24 12361124 YP_005781017.1 CDS rplN NC_017371.1 1366863 1367231 R COG0093 Ribosomal protein L14; 50S ribosomal protein L14 complement(1366863..1367231) Helicobacter pylori Gambia94/24 12361125 YP_005781018.1 CDS rpsQ NC_017371.1 1367234 1367494 R COG0186 Ribosomal protein S17; 30S ribosomal protein S17 complement(1367234..1367494) Helicobacter pylori Gambia94/24 12361126 YP_005781019.1 CDS HPGAM_06775 NC_017371.1 1367508 1367708 R COG0255 Ribosomal protein L29; 50S ribosomal protein L29 complement(1367508..1367708) Helicobacter pylori Gambia94/24 12361127 YP_005781020.1 CDS rplP NC_017371.1 1367695 1368120 R COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 complement(1367695..1368120) Helicobacter pylori Gambia94/24 12361128 YP_005781021.1 CDS rpsC NC_017371.1 1368123 1368827 R COG0092 Ribosomal protein S3; 30S ribosomal protein S3 complement(1368123..1368827) Helicobacter pylori Gambia94/24 12361129 YP_005781022.1 CDS rplV NC_017371.1 1368831 1369199 R COG0091 Ribosomal protein L22; 50S ribosomal protein L22 complement(1368831..1369199) Helicobacter pylori Gambia94/24 12361130 YP_005781023.1 CDS rpsS NC_017371.1 1369209 1369490 R COG0185 Ribosomal protein S19; 30S ribosomal protein S19 complement(1369209..1369490) Helicobacter pylori Gambia94/24 12361131 YP_005781024.1 CDS rplB NC_017371.1 1369502 1370332 R COG0090 Ribosomal protein L2; 50S ribosomal protein L2 complement(1369502..1370332) Helicobacter pylori Gambia94/24 12361132 YP_005781025.1 CDS rplW NC_017371.1 1370348 1370629 R COG0089 Ribosomal protein L23; 50S ribosomal protein L23 complement(1370348..1370629) Helicobacter pylori Gambia94/24 12361133 YP_005781026.1 CDS rplD NC_017371.1 1370633 1371280 R COG0088 Ribosomal protein L4; 50S ribosomal protein L4 complement(1370633..1371280) Helicobacter pylori Gambia94/24 12361134 YP_005781027.1 CDS rplC NC_017371.1 1371315 1371890 R COG0087 Ribosomal protein L3; 50S ribosomal protein L3 complement(1371315..1371890) Helicobacter pylori Gambia94/24 12361135 YP_005781028.1 CDS rpsJ NC_017371.1 1371927 1372241 R COG0051 Ribosomal protein S10; 30S ribosomal protein S10 complement(1371927..1372241) Helicobacter pylori Gambia94/24 12361136 YP_005781029.1 CDS HPGAM_06825 NC_017371.1 1372452 1373540 D COG1373 Predicted ATPase (AAA+ superfamily); ATP-binding protein 1372452..1373540 Helicobacter pylori Gambia94/24 12361137 YP_005781030.1 CDS HPGAM_06830 NC_017371.1 1373764 1374345 D hypothetical protein 1373764..1374345 Helicobacter pylori Gambia94/24 12361138 YP_005781031.1 CDS rnhB NC_017371.1 1374331 1374936 R COG0164 Ribonuclease HII; ribonuclease HII complement(1374331..1374936) Helicobacter pylori Gambia94/24 12361139 YP_005781032.1 CDS HPGAM_06840 NC_017371.1 1374966 1375217 R hypothetical protein complement(1374966..1375217) Helicobacter pylori Gambia94/24 12361140 YP_005781033.1 CDS fumC NC_017371.1 1375239 1376630 R COG0114 Fumarase; fumarate hydratase complement(1375239..1376630) Helicobacter pylori Gambia94/24 12361141 YP_005781034.1 CDS HPGAM_06850 NC_017371.1 1376804 1377181 D hypothetical protein 1376804..1377181 Helicobacter pylori Gambia94/24 12361142 YP_005781035.1 CDS HPGAM_06855 NC_017371.1 1377186 1378424 D hypothetical protein 1377186..1378424 Helicobacter pylori Gambia94/24 12361143 YP_005781036.1 CDS HPGAM_06860 NC_017371.1 1378421 1379437 D COG0845 Membrane-fusion protein; putative cobalt-zinc-cadmium resistance protein CzcB; putative signal peptide 1378421..1379437 Helicobacter pylori Gambia94/24 12361144 YP_005781037.1 CDS HPGAM_06865 NC_017371.1 1379438 1382545 D COG3696 Putative silver efflux pump; putative heavy metal efflux pump CzcA 1379438..1382545 Helicobacter pylori Gambia94/24 12361145 YP_005781038.1 CDS HPGAM_06870 NC_017371.1 1382526 1382882 R COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance); hypothetical protein complement(1382526..1382882) Helicobacter pylori Gambia94/24 12361146 YP_005781039.1 CDS HPGAM_06875 NC_017371.1 1382876 1383562 R COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); hypothetical protein complement(1382876..1383562) Helicobacter pylori Gambia94/24 12361147 YP_005781040.1 CDS HPGAM_06880 NC_017371.1 1383573 1384682 R COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ complement(1383573..1384682) Helicobacter pylori Gambia94/24 12361148 YP_005781041.1 CDS HPGAM_06885 NC_017371.1 1384808 1385944 D hypothetical protein 1384808..1385944 Helicobacter pylori Gambia94/24 12361149 YP_005781042.1 CDS mnmA NC_017371.1 1386255 1387283 R COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA complement(1386255..1387283) Helicobacter pylori Gambia94/24 12361150 YP_005781043.1 CDS HPGAM_06895 NC_017371.1 1387425 1388186 D COG2214 DnaJ-class molecular chaperone; hypothetical protein 1387425..1388186 Helicobacter pylori Gambia94/24 12361151 YP_005781044.1 CDS HPGAM_06900 NC_017371.1 1388183 1388698 R COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase complement(1388183..1388698) Helicobacter pylori Gambia94/24 12361152 YP_005781045.1 CDS HPGAM_06905 NC_017371.1 1388691 1389137 R COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator complement(1388691..1389137) Helicobacter pylori Gambia94/24 12361153 YP_005781046.1 CDS HPGAM_06910 NC_017371.1 1389448 1389885 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1389448..1389885 Helicobacter pylori Gambia94/24 12361154 YP_005781047.1 CDS HPGAM_06915 NC_017371.1 1389882 1390271 D COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 1389882..1390271 Helicobacter pylori Gambia94/24 12361155 YP_005781048.1 CDS HPGAM_06920 NC_017371.1 1390237 1391091 D COG0810 Periplasmic protein TonB, links inner and outer membranes; periplasmic protein TonB 1390237..1391091 Helicobacter pylori Gambia94/24 12361156 YP_005781049.1 CDS HPGAM_06925 NC_017371.1 1391115 1391225 R hypothetical protein complement(1391115..1391225) Helicobacter pylori Gambia94/24 12361157 YP_005781050.1 CDS HPGAM_06930 NC_017371.1 1391280 1393367 D Outer membrane protein HopM; putative signal peptide 1391280..1393367 Helicobacter pylori Gambia94/24 12361158 YP_005781051.1 CDS HPGAM_06935 NC_017371.1 1393377 1393490 R hypothetical protein complement(1393377..1393490) Helicobacter pylori Gambia94/24 12361159 YP_005781052.1 CDS HPGAM_06940 NC_017371.1 1393510 1394238 R COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein complement(1393510..1394238) Helicobacter pylori Gambia94/24 12361160 YP_005781053.1 CDS HPGAM_06945 NC_017371.1 1394168 1394272 D hypothetical protein 1394168..1394272 Helicobacter pylori Gambia94/24 12361161 YP_005781054.1 CDS HPGAM_06950 NC_017371.1 1394245 1395201 R COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein complement(1394245..1395201) Helicobacter pylori Gambia94/24 12361162 YP_005781055.1 CDS pgk NC_017371.1 1395217 1396425 R COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase complement(1395217..1396425) Helicobacter pylori Gambia94/24 12361163 YP_005781056.1 CDS HPGAM_06960 NC_017371.1 1396440 1397432 R COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase complement(1396440..1397432) Helicobacter pylori Gambia94/24 12361164 YP_005781057.1 CDS HPGAM_06965 NC_017371.1 1397521 1398222 R COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase complement(1397521..1398222) Helicobacter pylori Gambia94/24 12361165 YP_005781058.1 CDS HPGAM_06970 NC_017371.1 1398219 1398932 R COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase complement(1398219..1398932) Helicobacter pylori Gambia94/24 12361166 YP_005781059.1 CDS HPGAM_06975 NC_017371.1 1398919 1400082 R hypothetical protein complement(1398919..1400082) Helicobacter pylori Gambia94/24 12361167 YP_005781060.1 CDS HPGAM_06980 NC_017371.1 1400089 1401453 R COG0793 Periplasmic protease; carboxyl-terminal protease complement(1400089..1401453) Helicobacter pylori Gambia94/24 12361168 YP_005781061.1 CDS HPGAM_06985 NC_017371.1 1401678 1402550 R hypothetical protein complement(1401678..1402550) Helicobacter pylori Gambia94/24 12361169 YP_005781062.1 CDS HPGAM_06990 NC_017371.1 1402550 1403629 R COG0863 DNA modification methylase; type II DNA modification (methyltransferase) complement(1402550..1403629) Helicobacter pylori Gambia94/24 12361170 YP_005781063.1 CDS HPGAM_07000 NC_017371.1 1404633 1404743 D hypothetical protein 1404633..1404743 Helicobacter pylori Gambia94/24 12361171 YP_005781064.1 CDS HPGAM_07010 NC_017371.1 1405071 1407497 R COG0286 Type I restriction-modification system methyltransferase subunit; adenine specific DNA methyltransferase complement(1405071..1407497) Helicobacter pylori Gambia94/24 12361172 YP_005781065.1 CDS HPGAM_07015 NC_017371.1 1407522 1408343 R COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase complement(1407522..1408343) Helicobacter pylori Gambia94/24 12361173 YP_005781066.1 CDS HPGAM_07020 NC_017371.1 1408343 1409353 R COG0379 Quinolinate synthase; quinolinate synthetase complement(1408343..1409353) Helicobacter pylori Gambia94/24 12361174 YP_005781067.1 CDS HPGAM_07025 NC_017371.1 1409340 1410146 R COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase complement(1409340..1410146) Helicobacter pylori Gambia94/24 12361175 YP_005781068.1 CDS HPGAM_07030 NC_017371.1 1410140 1410646 R hypothetical protein complement(1410140..1410646) Helicobacter pylori Gambia94/24 12361176 YP_005781069.1 CDS HPGAM_07035 NC_017371.1 1410659 1411153 R hypothetical protein complement(1410659..1411153) Helicobacter pylori Gambia94/24 12361177 YP_005781070.1 CDS ubiA NC_017371.1 1411146 1412030 R COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase complement(1411146..1412030) Helicobacter pylori Gambia94/24 12361178 YP_005781071.1 CDS HPGAM_07045 NC_017371.1 1412059 1413372 R COG0658 Predicted membrane metal-binding protein; competence protein ComEC complement(1412059..1413372) Helicobacter pylori Gambia94/24 12361179 YP_005781072.1 CDS HPGAM_07050 NC_017371.1 1413369 1414844 R COG0305 Replicative DNA helicase; replicative DNA helicase complement(1413369..1414844) Helicobacter pylori Gambia94/24 12361180 YP_005781073.1 CDS HPGAM_07055 NC_017371.1 1414855 1416249 R COG0062 Uncharacterized conserved protein; hypothetical protein complement(1414855..1416249) Helicobacter pylori Gambia94/24 12361181 YP_005781074.1 CDS HPGAM_07060 NC_017371.1 1416252 1417370 R COG0642 Signal transduction histidine kinase; hypothetical protein complement(1416252..1417370) Helicobacter pylori Gambia94/24 12361182 YP_005781075.1 CDS HPGAM_07065 NC_017371.1 1417420 1418061 R COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; putative transcriptional regulator complement(1417420..1418061) Helicobacter pylori Gambia94/24 12361183 YP_005781076.1 CDS HPGAM_07070 NC_017371.1 1418149 1419420 R type IIS restriction enzyme R protein (MBOIIR) complement(1418149..1419420) Helicobacter pylori Gambia94/24 12361184 YP_005781077.1 CDS HPGAM_07075 NC_017371.1 1419436 1420218 R COG0863 DNA modification methylase; type IIS restriction enzyme M1 protein (mod) complement(1419436..1420218) Helicobacter pylori Gambia94/24 12361185 YP_005781078.1 CDS HPGAM_07080 NC_017371.1 1420205 1421068 R COG0863 DNA modification methylase; type IIS restriction enzyme M2 protein (mod) complement(1420205..1421068) Helicobacter pylori Gambia94/24 12361186 YP_005781079.1 CDS HPGAM_07085 NC_017371.1 1421315 1422742 D COG2189 Adenine specific DNA methylase Mod; type III restriction-modification system: methylase 1421315..1422742 Helicobacter pylori Gambia94/24 12361187 YP_005781080.1 CDS HPGAM_07090 NC_017371.1 1422726 1423796 D COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA methylase 1422726..1423796 Helicobacter pylori Gambia94/24 12361188 YP_005781081.1 CDS HPGAM_07095 NC_017371.1 1423806 1426694 D COG1061 DNA or RNA helicases of superfamily II; type III restriction enzyme R protein 1423806..1426694 Helicobacter pylori Gambia94/24 12361189 YP_005781082.1 CDS HPGAM_07100 NC_017371.1 1426726 1427472 R COG1792 Cell shape-determining protein; rod shape-determining protein MreC complement(1426726..1427472) Helicobacter pylori Gambia94/24 12361190 YP_005781083.1 CDS HPGAM_07105 NC_017371.1 1427476 1428519 R COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB complement(1427476..1428519) Helicobacter pylori Gambia94/24 12361191 YP_005781084.1 CDS clpX NC_017371.1 1428580 1429938 R COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX complement(1428580..1429938) Helicobacter pylori Gambia94/24 12361192 YP_005781085.1 CDS HPGAM_07115 NC_017371.1 1429940 1430752 R COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase complement(1429940..1430752) Helicobacter pylori Gambia94/24 12361193 YP_005781086.1 CDS fabZ NC_017371.1 1430755 1431234 R COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase complement(1430755..1431234) Helicobacter pylori Gambia94/24 12361194 YP_005781087.1 CDS HPGAM_07125 NC_017371.1 1431417 1431806 R COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW complement(1431417..1431806) Helicobacter pylori Gambia94/24 12361195 YP_005781088.1 CDS HPGAM_07130 NC_017371.1 1432024 1432218 D hypothetical protein 1432024..1432218 Helicobacter pylori Gambia94/24 12361196 YP_005781089.1 CDS HPGAM_07135 NC_017371.1 1432209 1432871 D COG4105 DNA uptake lipoprotein; putative lipoprotein 1432209..1432871 Helicobacter pylori Gambia94/24 12361197 YP_005781090.1 CDS HPGAM_07140 NC_017371.1 1432912 1435401 D COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 1432912..1435401 Helicobacter pylori Gambia94/24 12361198 YP_005781091.1 CDS HPGAM_07145 NC_017371.1 1435410 1436237 D COG0287 Prephenate dehydrogenase; prephenate dehydrogenase 1435410..1436237 Helicobacter pylori Gambia94/24 12361199 YP_005781092.1 CDS HPGAM_07150 NC_017371.1 1436317 1436439 D hypothetical protein 1436317..1436439 Helicobacter pylori Gambia94/24 12361200 YP_005781093.1 CDS HPGAM_07155 NC_017371.1 1436658 1437521 R COG1864 DNA/RNA endonuclease G, NUC1; putative endonuclease complement(1436658..1437521) Helicobacter pylori Gambia94/24 12361201 YP_005781094.1 CDS HPGAM_07160 NC_017371.1 1437645 1439612 R COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA-methyltransferase complement(1437645..1439612) Helicobacter pylori Gambia94/24 12361202 YP_005781095.1 CDS HPGAM_07165 NC_017371.1 1439606 1441954 R COG3421 Uncharacterized protein conserved in bacteria; putative type III restriction enzyme R protein complement(1439606..1441954) Helicobacter pylori Gambia94/24 12361203 YP_005781096.1 CDS HPGAM_07170 NC_017371.1 1442367 1443215 D COG0502 Biotin synthase and related enzymes; biotin synthase 1442367..1443215 Helicobacter pylori Gambia94/24 12361204 YP_005781097.1 CDS HPGAM_07175 NC_017371.1 1443215 1444093 D COG1295 Predicted membrane protein; putative ribonuclease N 1443215..1444093 Helicobacter pylori Gambia94/24 12361205 YP_005781098.1 CDS HPGAM_07180 NC_017371.1 1444121 1444303 R hypothetical protein complement(1444121..1444303) Helicobacter pylori Gambia94/24 12361206 YP_005781099.1 CDS HPGAM_07185 NC_017371.1 1448501 1448680 R hypothetical protein complement(1448501..1448680) Helicobacter pylori Gambia94/24 12361209 YP_005781100.1 CDS HPGAM_07190 NC_017371.1 1448754 1450478 D COG1479 Uncharacterized conserved protein; hypothetical protein 1448754..1450478 Helicobacter pylori Gambia94/24 12361210 YP_005781101.1 CDS HPGAM_07205 NC_017371.1 1451826 1453613 D hypothetical protein 1451826..1453613 Helicobacter pylori Gambia94/24 12361211 YP_005781102.1 CDS HPGAM_07220 NC_017371.1 1454832 1455278 R COG0780 Enzyme related to GTP cyclohydrolase I; 7-cyano-7-deazaguanine reductase complement(1454832..1455278) Helicobacter pylori Gambia94/24 12361212 YP_005781103.1 CDS HPGAM_07225 NC_017371.1 1455337 1455678 D COG0799 Uncharacterized homolog of plant Iojap protein; hypothetical protein 1455337..1455678 Helicobacter pylori Gambia94/24 12361213 YP_005781104.1 CDS miaA NC_017371.1 1455749 1456582 D COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1455749..1456582 Helicobacter pylori Gambia94/24 12361214 YP_005781105.1 CDS HPGAM_07235 NC_017371.1 1456583 1457686 D COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide biosynthesis protein 1456583..1457686 Helicobacter pylori Gambia94/24 12361215 YP_005781106.1 CDS murB NC_017371.1 1459436 1460215 R COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1459436..1460215) Helicobacter pylori Gambia94/24 12361217 YP_005781107.1 CDS fliQ NC_017371.1 1460219 1460485 R COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ complement(1460219..1460485) Helicobacter pylori Gambia94/24 12361219 YP_005781108.1 CDS fliI NC_017371.1 1460496 1461800 R COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase complement(1460496..1461800) Helicobacter pylori Gambia94/24 12361220 YP_005781109.1 CDS HPGAM_07265 NC_017371.1 1461801 1462715 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; putative type IV secretion system ATPase complement(1461801..1462715) Helicobacter pylori Gambia94/24 12361221 YP_005781110.1 CDS ileS NC_017371.1 1462732 1465494 R COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase complement(1462732..1465494) Helicobacter pylori Gambia94/24 12361222 YP_005781111.1 CDS HPGAM_07275 NC_017371.1 1465511 1465768 R COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); hypothetical protein complement(1465511..1465768) Helicobacter pylori Gambia94/24 12361223 YP_005781112.1 CDS HPGAM_07280 NC_017371.1 1465870 1466490 D hypothetical protein 1465870..1466490 Helicobacter pylori Gambia94/24 12361224 YP_005781113.1 CDS HPGAM_07285 NC_017371.1 1466660 1466917 R hypothetical protein complement(1466660..1466917) Helicobacter pylori Gambia94/24 12361225 YP_005781114.1 CDS HPGAM_07290 NC_017371.1 1466929 1467096 D hypothetical protein 1466929..1467096 Helicobacter pylori Gambia94/24 12361226 YP_005781115.1 CDS HPGAM_07295 NC_017371.1 1467108 1467389 R hypothetical protein complement(1467108..1467389) Helicobacter pylori Gambia94/24 12361227 YP_005781116.1 CDS HPGAM_07300 NC_017371.1 1467452 1467589 R hypothetical protein complement(1467452..1467589) Helicobacter pylori Gambia94/24 12361228 YP_005781117.1 CDS ksgA NC_017371.1 1467652 1468467 D COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase 1467652..1468467 Helicobacter pylori Gambia94/24 12361229 YP_005781118.1 CDS HPGAM_07310 NC_017371.1 1468520 1470598 D COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; hypothetical protein 1468520..1470598 Helicobacter pylori Gambia94/24 12361230 YP_005781119.1 CDS HPGAM_07315 NC_017371.1 1470582 1471571 D COG0794 Predicted sugar phosphate isomerase involved in capsule formation; arabinose-5-phosphate isomerase 1470582..1471571 Helicobacter pylori Gambia94/24 12361231 YP_005781120.1 CDS HPGAM_07320 NC_017371.1 1471568 1472641 D COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N 1471568..1472641 Helicobacter pylori Gambia94/24 12361232 YP_005781121.1 CDS HPGAM_07325 NC_017371.1 1472794 1472886 D hypothetical protein 1472794..1472886 Helicobacter pylori Gambia94/24 12361233 YP_005781122.1 CDS HPGAM_07330 NC_017371.1 1473112 1473204 D hypothetical protein 1473112..1473204 Helicobacter pylori Gambia94/24 12361234 YP_005781123.1 CDS HPGAM_07335 NC_017371.1 1473286 1473843 R COG0732 Restriction endonuclease S subunits; type I R-M system specificity subunit complement(1473286..1473843) Helicobacter pylori Gambia94/24 12361235 YP_005781124.1 CDS HPGAM_07340 NC_017371.1 1474666 1476696 D COG3843 Type IV secretory pathway, VirD2 components (relaxase); relaxase 1474666..1476696 Helicobacter pylori Gambia94/24 12361236 YP_005781125.1 CDS HPGAM_07345 NC_017371.1 1477848 1478918 D COG0582 Integrase; integrase/recombinase (xerD) 1477848..1478918 Helicobacter pylori Gambia94/24 12361237 YP_005781126.1 CDS HPGAM_07350 NC_017371.1 1479226 1480029 R hypothetical protein complement(1479226..1480029) Helicobacter pylori Gambia94/24 12361238 YP_005781127.1 CDS HPGAM_07355 NC_017371.1 1480001 1480252 R hypothetical protein complement(1480001..1480252) Helicobacter pylori Gambia94/24 12361239 YP_005781128.1 CDS HPGAM_07360 NC_017371.1 1480384 1481064 R hypothetical protein complement(1480384..1481064) Helicobacter pylori Gambia94/24 12361240 YP_005781129.1 CDS HPGAM_07365 NC_017371.1 1481285 1482298 D hypothetical protein 1481285..1482298 Helicobacter pylori Gambia94/24 12361241 YP_005781130.1 CDS HPGAM_07370 NC_017371.1 1482303 1483580 R hypothetical protein complement(1482303..1483580) Helicobacter pylori Gambia94/24 12361242 YP_005781131.1 CDS HPGAM_07375 NC_017371.1 1483577 1484839 R type IV secretion system protein TrbL complement(1483577..1484839) Helicobacter pylori Gambia94/24 12361243 YP_005781132.1 CDS HPGAM_07380 NC_017371.1 1484836 1486269 R hypothetical protein complement(1484836..1486269) Helicobacter pylori Gambia94/24 12361244 YP_005781133.1 CDS HPGAM_07385 NC_017371.1 1486279 1488324 R hypothetical protein complement(1486279..1488324) Helicobacter pylori Gambia94/24 12361245 YP_005781134.1 CDS HPGAM_07390 NC_017371.1 1488324 1489376 R hypothetical protein complement(1488324..1489376) Helicobacter pylori Gambia94/24 12361246 YP_005781135.1 CDS HPGAM_07395 NC_017371.1 1489377 1489541 R hypothetical protein complement(1489377..1489541) Helicobacter pylori Gambia94/24 12361247 YP_005781136.1 CDS HPGAM_07400 NC_017371.1 1490178 1490846 D COG1192 ATPases involved in chromosome partitioning; hypothetical protein 1490178..1490846 Helicobacter pylori Gambia94/24 12361248 YP_005781137.1 CDS HPGAM_07405 NC_017371.1 1490893 1491270 D hypothetical protein 1490893..1491270 Helicobacter pylori Gambia94/24 12361249 YP_005781138.1 CDS HPGAM_07410 NC_017371.1 1491248 1491913 D hypothetical protein 1491248..1491913 Helicobacter pylori Gambia94/24 12361250 YP_005781139.1 CDS HPGAM_07415 NC_017371.1 1491987 1492790 R hypothetical protein complement(1491987..1492790) Helicobacter pylori Gambia94/24 12361251 YP_005781140.1 CDS HPGAM_07420 NC_017371.1 1492760 1493230 R hypothetical protein complement(1492760..1493230) Helicobacter pylori Gambia94/24 12361252 YP_005781141.1 CDS HPGAM_07425 NC_017371.1 1493285 1495345 R COG0550 Topoisomerase IA; DNA topoisomerase I complement(1493285..1495345) Helicobacter pylori Gambia94/24 12361253 YP_005781142.1 CDS HPGAM_07430 NC_017371.1 1495358 1495759 R hypothetical protein complement(1495358..1495759) Helicobacter pylori Gambia94/24 12361254 YP_005781143.1 CDS HPGAM_07435 NC_017371.1 1496059 1496268 R hypothetical protein complement(1496059..1496268) Helicobacter pylori Gambia94/24 12361255 YP_005781144.1 CDS HPGAM_07440 NC_017371.1 1496279 1496392 R hypothetical protein complement(1496279..1496392) Helicobacter pylori Gambia94/24 12361256 YP_005781145.1 CDS HPGAM_07455 NC_017371.1 1505340 1507244 R COG3505 Type IV secretory pathway, VirD4 components; VirD4 coupling protein complement(1505340..1507244) Helicobacter pylori Gambia94/24 12361257 YP_005781146.1 CDS HPGAM_07460 NC_017371.1 1507241 1507759 R hypothetical protein complement(1507241..1507759) Helicobacter pylori Gambia94/24 12361258 YP_005781147.1 CDS HPGAM_07465 NC_017371.1 1507756 1508700 R COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; VirB11 type IV secretion ATPase complement(1507756..1508700) Helicobacter pylori Gambia94/24 12361259 YP_005781148.1 CDS HPGAM_07470 NC_017371.1 1508705 1508899 R hypothetical protein complement(1508705..1508899) Helicobacter pylori Gambia94/24 12361260 YP_005781149.1 CDS HPGAM_07475 NC_017371.1 1508993 1509955 R COG0013 Alanyl-tRNA synthetase; hypothetical protein complement(1508993..1509955) Helicobacter pylori Gambia94/24 12361261 YP_005781150.1 CDS HPGAM_07480 NC_017371.1 1509968 1512208 R hypothetical protein complement(1509968..1512208) Helicobacter pylori Gambia94/24 12361262 YP_005781151.1 CDS HPGAM_07485 NC_017371.1 1512192 1513400 R COG2948 Type IV secretory pathway, VirB10 components; VirB10 type IV secretion protein complement(1512192..1513400) Helicobacter pylori Gambia94/24 12361263 YP_005781152.1 CDS HPGAM_07490 NC_017371.1 1513397 1515052 R COG3504 Type IV secretory pathway, VirB9 components; type IV secretion system protein VirB9 complement(1513397..1515052) Helicobacter pylori Gambia94/24 12361264 YP_005781153.1 CDS HPGAM_07495 NC_017371.1 1515049 1516185 R COG3736 Type IV secretory pathway, component VirB8; VirB8 type IV secretion protein complement(1515049..1516185) Helicobacter pylori Gambia94/24 12361265 YP_005781154.1 CDS HPGAM_07500 NC_017371.1 1516178 1516318 R VirB7 type IV secretion protein complement(1516178..1516318) Helicobacter pylori Gambia94/24 12361266 YP_005781155.1 CDS HPGAM_07505 NC_017371.1 1516315 1518891 R COG3451 Type IV secretory pathway, VirB4 components; VirB4 type IV secretion ATPase complement(1516315..1518891) Helicobacter pylori Gambia94/24 12361267 YP_005781156.1 CDS HPGAM_07510 NC_017371.1 1518891 1519127 R hypothetical protein complement(1518891..1519127) Helicobacter pylori Gambia94/24 12361268 YP_005781157.1 CDS HPGAM_07515 NC_017371.1 1519139 1519402 R hypothetical protein complement(1519139..1519402) Helicobacter pylori Gambia94/24 12361269 YP_005781158.1 CDS HPGAM_07520 NC_017371.1 1519414 1519698 R hypothetical protein complement(1519414..1519698) Helicobacter pylori Gambia94/24 12361270 YP_005781159.1 CDS HPGAM_07525 NC_017371.1 1519686 1520174 R hypothetical protein complement(1519686..1520174) Helicobacter pylori Gambia94/24 12361271 YP_005781160.1 CDS HPGAM_07530 NC_017371.1 1520167 1520397 R hypothetical protein complement(1520167..1520397) Helicobacter pylori Gambia94/24 12361272 YP_005781161.1 CDS HPGAM_07535 NC_017371.1 1520400 1521188 R hypothetical protein complement(1520400..1521188) Helicobacter pylori Gambia94/24 12361273 YP_005781162.1 CDS HPGAM_07540 NC_017371.1 1521166 1521714 R COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme complement(1521166..1521714) Helicobacter pylori Gambia94/24 12361274 YP_005781163.1 CDS HPGAM_07545 NC_017371.1 1521756 1522637 R COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase complement(1521756..1522637) Helicobacter pylori Gambia94/24 12361275 YP_005781164.1 CDS HPGAM_07550 NC_017371.1 1522640 1523518 R COG0616 Periplasmic serine proteases (ClpP class); putative protease IV complement(1522640..1523518) Helicobacter pylori Gambia94/24 12361276 YP_005781165.1 CDS HPGAM_07555 NC_017371.1 1523589 1523849 D hypothetical protein 1523589..1523849 Helicobacter pylori Gambia94/24 12361277 YP_005781166.1 CDS HPGAM_07560 NC_017371.1 1524052 1524732 D hypothetical protein 1524052..1524732 Helicobacter pylori Gambia94/24 12361278 YP_005781167.1 CDS HPGAM_07565 NC_017371.1 1524741 1525217 D COG0807 GTP cyclohydrolase II; hypothetical protein 1524741..1525217 Helicobacter pylori Gambia94/24 12361279 YP_005781168.1 CDS HPGAM_07570 NC_017371.1 1525227 1525661 D hypothetical protein 1525227..1525661 Helicobacter pylori Gambia94/24 12361280 YP_005781169.1 CDS HPGAM_07575 NC_017371.1 1528620 1529399 R hypothetical protein complement(1528620..1529399) Helicobacter pylori Gambia94/24 12361282 YP_005781170.1 CDS HPGAM_07580 NC_017371.1 1529523 1530011 D COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase 1529523..1530011 Helicobacter pylori Gambia94/24 12361283 YP_005781171.1 CDS HPGAM_07585 NC_017371.1 1530029 1530259 D COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 1530029..1530259 Helicobacter pylori Gambia94/24 12361284 YP_005781172.1 CDS HPGAM_07590 NC_017371.1 1530256 1531080 D COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1530256..1531080 Helicobacter pylori Gambia94/24 12361285 YP_005781173.1 CDS smpB NC_017371.1 1531058 1531516 D COG0691 tmRNA-binding protein; SsrA-binding protein 1531058..1531516 Helicobacter pylori Gambia94/24 12361286 YP_005781174.1 CDS HPGAM_07600 NC_017371.1 1531519 1531971 D COG0811 Biopolymer transport proteins; biopolymer transport protein 1531519..1531971 Helicobacter pylori Gambia94/24 12361287 YP_005781175.1 CDS HPGAM_07605 NC_017371.1 1531900 1532019 R hypothetical protein complement(1531900..1532019) Helicobacter pylori Gambia94/24 12361288 YP_005781176.1 CDS HPGAM_07610 NC_017371.1 1531982 1532383 D COG0848 Biopolymer transport protein; biopolymer transport protein 1531982..1532383 Helicobacter pylori Gambia94/24 12361289 YP_005781177.1 CDS rpmH NC_017371.1 1532455 1532589 D COG0230 Ribosomal protein L34; 50S ribosomal protein L34 1532455..1532589 Helicobacter pylori Gambia94/24 12361291 YP_005781178.1 CDS HPGAM_07620 NC_017371.1 1532549 1533034 D COG0594 RNase P protein component; ribonuclease P protein component 1532549..1533034 Helicobacter pylori Gambia94/24 12361292 YP_005781179.1 CDS HPGAM_07625 NC_017371.1 1533021 1533374 D COG0759 Uncharacterized conserved protein; hypothetical protein 1533021..1533374 Helicobacter pylori Gambia94/24 12361293 YP_005781180.1 CDS HPGAM_07630 NC_017371.1 1533380 1535023 D COG0706 Preprotein translocase subunit YidC; membrane protein insertase 1533380..1535023 Helicobacter pylori Gambia94/24 12361294 YP_005781181.1 CDS HPGAM_07635 NC_017371.1 1535037 1535813 D COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain; hypothetical protein 1535037..1535813 Helicobacter pylori Gambia94/24 12361295 YP_005781182.1 CDS trmE NC_017371.1 1535806 1537158 D COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1535806..1537158 Helicobacter pylori Gambia94/24 12361296 YP_005781183.1 CDS HPGAM_07645 NC_017371.1 1537361 1539601 D putative Outer membrane protein 1537361..1539601 Helicobacter pylori Gambia94/24 12361297 YP_005781184.1 CDS HPGAM_07650 NC_017371.1 1539618 1539782 R hypothetical protein complement(1539618..1539782) Helicobacter pylori Gambia94/24 12361298 YP_005781185.1 CDS HPGAM_07655 NC_017371.1 1540201 1541112 R hypothetical protein complement(1540201..1541112) Helicobacter pylori Gambia94/24 12361299 YP_005781186.1 CDS HPGAM_07660 NC_017371.1 1541122 1541463 R hypothetical protein complement(1541122..1541463) Helicobacter pylori Gambia94/24 12361300 YP_005781187.1 CDS HPGAM_07665 NC_017371.1 1541471 1541998 R membrane-associated lipoprotein complement(1541471..1541998) Helicobacter pylori Gambia94/24 12361301 YP_005781188.1 CDS HPGAM_07670 NC_017371.1 1542022 1542654 R collagen-binding surface adhesin SpaP complement(1542022..1542654) Helicobacter pylori Gambia94/24 12361302 YP_005781189.1 CDS HPGAM_07675 NC_017371.1 1543013 1543327 R COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin complement(1543013..1543327) Helicobacter pylori Gambia94/24 12361303 YP_005781190.1 CDS HPGAM_07680 NC_017371.1 1543383 1544156 R COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; hypothetical protein complement(1543383..1544156) Helicobacter pylori Gambia94/24 12361304 YP_005781191.1 CDS dnaE NC_017371.1 1544153 1547788 R COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha complement(1544153..1547788) Helicobacter pylori Gambia94/24 12361305 YP_005781192.1 CDS HPGAM_07690 NC_017371.1 1547937 1548989 D COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 1547937..1548989 Helicobacter pylori Gambia94/24 12361306 YP_005781193.1 CDS HPGAM_07695 NC_017371.1 1549288 1549875 R COG3187 Heat shock protein; putative secreted motility protein complement(1549288..1549875) Helicobacter pylori Gambia94/24 12361307 YP_005781194.1 CDS HPGAM_07700 NC_017371.1 1549892 1550569 R hypothetical protein complement(1549892..1550569) Helicobacter pylori Gambia94/24 12361308 YP_005781195.1 CDS HPGAM_07705 NC_017371.1 1550572 1551387 R COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transport system substrate binding protein complement(1550572..1551387) Helicobacter pylori Gambia94/24 12361309 YP_005781196.1 CDS HPGAM_07710 NC_017371.1 1551372 1552157 R COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein complement(1551372..1552157) Helicobacter pylori Gambia94/24 12361310 YP_005781197.1 CDS HPGAM_07715 NC_017371.1 1552157 1553290 R COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; hypothetical protein complement(1552157..1553290) Helicobacter pylori Gambia94/24 12361311 YP_005781198.1 CDS HPGAM_07720 NC_017371.1 1553424 1554119 D putative Outer membrane protein 1553424..1554119 Helicobacter pylori Gambia94/24 12361312 YP_005781199.1 CDS HPGAM_07725 NC_017371.1 1554124 1555146 R COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase complement(1554124..1555146) Helicobacter pylori Gambia94/24 12361313 YP_005781200.1 CDS HPGAM_07730 NC_017371.1 1555197 1555943 R outer membrane protein complement(1555197..1555943) Helicobacter pylori Gambia94/24 12361314 YP_005781201.1 CDS HPGAM_07735 NC_017371.1 1556057 1558774 R COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I complement(1556057..1558774) Helicobacter pylori Gambia94/24 12361315 YP_005781202.1 CDS HPGAM_07740 NC_017371.1 1558846 1559487 R type II restriction enzyme complement(1558846..1559487) Helicobacter pylori Gambia94/24 12361316 YP_005781203.1 CDS HPGAM_07745 NC_017371.1 1559484 1561520 R COG0286 Type I restriction-modification system methyltransferase subunit; putative type II DNA modification enzyme (methyltransferase) complement(1559484..1561520) Helicobacter pylori Gambia94/24 12361317 YP_005781204.1 CDS HPGAM_07750 NC_017371.1 1561552 1562127 R hypothetical protein complement(1561552..1562127) Helicobacter pylori Gambia94/24 12361318 YP_005781205.1 CDS tmk NC_017371.1 1562115 1562690 R COG0125 Thymidylate kinase; thymidylate kinase complement(1562115..1562690) Helicobacter pylori Gambia94/24 12361319 YP_005781206.1 CDS coaD NC_017371.1 1562692 1563165 R COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase complement(1562692..1563165) Helicobacter pylori Gambia94/24 12361320 YP_005781207.1 CDS HPGAM_07765 NC_017371.1 1563165 1563728 R COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1563165..1563728) Helicobacter pylori Gambia94/24 12361321 YP_005781208.1 CDS HPGAM_07770 NC_017371.1 1563709 1563813 D hypothetical protein 1563709..1563813 Helicobacter pylori Gambia94/24 12361322 YP_005781209.1 CDS flgA NC_017371.1 1563738 1564394 R COG4108 Peptide chain release factor RF-3; flagellar basal body P-ring biosynthesis protein FlgA complement(1563738..1564394) Helicobacter pylori Gambia94/24 12361323 YP_005781210.1 CDS HPGAM_07780 NC_017371.1 1564391 1566436 R COG0210 Superfamily I DNA and RNA helicases; putative ATP-dependent DNA helicase complement(1564391..1566436) Helicobacter pylori Gambia94/24 12361324 YP_005781211.1 CDS HPGAM_07785 NC_017371.1 1566436 1568961 R COG0457 FOG: TPR repeat; hypothetical protein complement(1566436..1568961) Helicobacter pylori Gambia94/24 12361325 YP_005781212.1 CDS HPGAM_07790 NC_017371.1 1568971 1570218 R COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase complement(1568971..1570218) Helicobacter pylori Gambia94/24 12361326 YP_005781213.1 CDS HPGAM_07795 NC_017371.1 1570219 1571016 R COG0388 Predicted amidohydrolase; hypothetical protein complement(1570219..1571016) Helicobacter pylori Gambia94/24 12361327 YP_005781214.1 CDS HPGAM_07800 NC_017371.1 1571020 1571280 R COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit complement(1571020..1571280) Helicobacter pylori Gambia94/24 12361328 YP_005781215.1 CDS ubiE NC_017371.1 1571290 1572030 R COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase complement(1571290..1572030) Helicobacter pylori Gambia94/24 12361329 YP_005781216.1 CDS HPGAM_07810 NC_017371.1 1572040 1572486 R COG1981 Predicted membrane protein; hypothetical protein complement(1572040..1572486) Helicobacter pylori Gambia94/24 12361330 YP_005781217.1 CDS HPGAM_07815 NC_017371.1 1572500 1573069 R COG1739 Uncharacterized conserved protein; X-Pro dipeptidase complement(1572500..1573069) Helicobacter pylori Gambia94/24 12361331 YP_005781218.1 CDS HPGAM_07820 NC_017371.1 1573056 1574186 R COG0842 ABC-type multidrug transport system, permease component; antibiotic transport system permease complement(1573056..1574186) Helicobacter pylori Gambia94/24 12361332 YP_005781219.1 CDS HPGAM_07825 NC_017371.1 1574183 1575280 R COG0842 ABC-type multidrug transport system, permease component; hypothetical protein complement(1574183..1575280) Helicobacter pylori Gambia94/24 12361333 YP_005781220.1 CDS HPGAM_07830 NC_017371.1 1575292 1576281 R COG0845 Membrane-fusion protein; hypothetical protein complement(1575292..1576281) Helicobacter pylori Gambia94/24 12361334 YP_005781221.1 CDS HPGAM_07835 NC_017371.1 1576293 1577825 R COG1538 Outer membrane protein; outer membrane efflux protein complement(1576293..1577825) Helicobacter pylori Gambia94/24 12361335 YP_005781222.1 CDS HPGAM_07840 NC_017371.1 1577822 1579171 R COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein complement(1577822..1579171) Helicobacter pylori Gambia94/24 12361336 YP_005781223.1 CDS HPGAM_07845 NC_017371.1 1579275 1580876 R COG0306 Phosphate/sulphate permeases; phosphate permease complement(1579275..1580876) Helicobacter pylori Gambia94/24 12361337 YP_005781224.1 CDS HPGAM_07850 NC_017371.1 1581017 1581286 D COG0694 Thioredoxin-like proteins and domains; putative nifU-like protein 1581017..1581286 Helicobacter pylori Gambia94/24 12361338 YP_005781225.1 CDS HPGAM_07855 NC_017371.1 1581299 1581910 D hypothetical protein 1581299..1581910 Helicobacter pylori Gambia94/24 12361339 YP_005781226.1 CDS murE NC_017371.1 1581914 1583257 D COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1581914..1583257 Helicobacter pylori Gambia94/24 12361340 YP_005781227.1 CDS HPGAM_07865 NC_017371.1 1583260 1584210 D COG0176 Transaldolase; transaldolase 1583260..1584210 Helicobacter pylori Gambia94/24 12361341 YP_005781228.1 CDS HPGAM_07870 NC_017371.1 1584265 1584801 D COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 1584265..1584801 Helicobacter pylori Gambia94/24 12361342 YP_005781229.1 CDS HPGAM_07875 NC_017371.1 1584811 1585371 D COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1584811..1585371 Helicobacter pylori Gambia94/24 12361343 YP_005781230.1 CDS HPGAM_07880 NC_017371.1 1585381 1586448 D COG0795 Predicted permeases; hypothetical protein 1585381..1586448 Helicobacter pylori Gambia94/24 12361344 YP_005781231.1 CDS HPGAM_07885 NC_017371.1 1586504 1587505 D COG3392 Adenine-specific DNA methylase; putative type II methylase 1586504..1587505 Helicobacter pylori Gambia94/24 12361345 YP_005781232.1 CDS HPGAM_07890 NC_017371.1 1587556 1588410 D COG0338 Site-specific DNA methylase; DNA adenine methylase 1587556..1588410 Helicobacter pylori Gambia94/24 12361346 YP_005781233.1 CDS HPGAM_07895 NC_017371.1 1588407 1590023 D putative endonuclease 1588407..1590023 Helicobacter pylori Gambia94/24 12361347 YP_005781234.1 CDS HPGAM_07900 NC_017371.1 1590084 1591250 R putative Outer membrane protein complement(1590084..1591250) Helicobacter pylori Gambia94/24 12361348 YP_005781235.1 CDS HPGAM_07905 NC_017371.1 1591429 1591866 D COG3399 Uncharacterized protein conserved in bacteria; hypothetical protein 1591429..1591866 Helicobacter pylori Gambia94/24 12361349 YP_005781236.1 CDS HPGAM_07910 NC_017371.1 1591863 1594229 R COG2217 Cation transport ATPase; putative component of cation transport for cbb3-type oxidase complement(1591863..1594229) Helicobacter pylori Gambia94/24 12361350 YP_005781237.1 CDS HPGAM_07915 NC_017371.1 1594239 1594955 R COG4123 Predicted O-methyltransferase; hypothetical protein complement(1594239..1594955) Helicobacter pylori Gambia94/24 12361351 YP_005781238.1 CDS HPGAM_07920 NC_017371.1 1594937 1595971 R COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein complement(1594937..1595971) Helicobacter pylori Gambia94/24 12361352 YP_005781239.1 CDS HPGAM_07925 NC_017371.1 1595975 1597201 R COG0786 Na+/glutamate symporter; Sodium/glutamate symporter complement(1595975..1597201) Helicobacter pylori Gambia94/24 12361353 YP_005781240.1 CDS HPGAM_07930 NC_017371.1 1597286 1598485 D COG1748 Saccharopine dehydrogenase and related proteins; saccharopine dehydrogenase 1597286..1598485 Helicobacter pylori Gambia94/24 12361354 YP_005781241.1 CDS HPGAM_07935 NC_017371.1 1598495 1599871 R COG0348 Polyferredoxin; ferrodoxin-like protein complement(1598495..1599871) Helicobacter pylori Gambia94/24 12361355 YP_005781242.1 CDS HPGAM_07940 NC_017371.1 1599851 1600639 D COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1599851..1600639 Helicobacter pylori Gambia94/24 12361356 YP_005781243.1 CDS HPGAM_07945 NC_017371.1 1600636 1600989 D COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 1600636..1600989 Helicobacter pylori Gambia94/24 12361357 YP_005781244.1 CDS HPGAM_07950 NC_017371.1 1600973 1601275 D hypothetical protein 1600973..1601275 Helicobacter pylori Gambia94/24 12361358 YP_005781245.1 CDS HPGAM_07955 NC_017371.1 1601452 1604091 D COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 1601452..1604091 Helicobacter pylori Gambia94/24 12361359 YP_005781246.1 CDS HPGAM_07960 NC_017371.1 1604318 1605478 D COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1604318..1605478 Helicobacter pylori Gambia94/24 12361360 YP_005781247.1 CDS nusA NC_017371.1 1605574 1606761 D COG0195 Transcription elongation factor; transcription elongation factor NusA 1605574..1606761 Helicobacter pylori Gambia94/24 12361361 YP_005781248.1 CDS HPGAM_07980 NC_017371.1 1608069 1608203 D hypothetical protein 1608069..1608203 Helicobacter pylori Gambia94/24 12361362 YP_005781249.1 CDS HPGAM_07985 NC_017371.1 1608231 1608329 D hypothetical protein 1608231..1608329 Helicobacter pylori Gambia94/24 12361363 YP_005781250.1 CDS HPGAM_07990 NC_017371.1 1608532 1608624 D hypothetical protein 1608532..1608624 Helicobacter pylori Gambia94/24 12361364 YP_005781251.1 CDS HPGAM_08015 NC_017371.1 1614780 1617689 R COG3587 Restriction endonuclease; type III restriction enzyme complement(1614780..1617689) Helicobacter pylori Gambia94/24 12361365 YP_005781252.1 CDS HPGAM_08020 NC_017371.1 1617692 1618279 R COG2189 Adenine specific DNA methylase Mod; type III R-M system modification enzyme complement(1617692..1618279) Helicobacter pylori Gambia94/24 12361366 YP_005781253.1 CDS HPGAM_08025 NC_017371.1 1618276 1619658 R COG2189 Adenine specific DNA methylase Mod; putative type III restriction enzyme M protein (type III adenine specific DNA methyltransferase (Mod)) complement(1618276..1619658) Helicobacter pylori Gambia94/24 12361367 YP_005781254.1 CDS HPGAM_08030 NC_017371.1 1619710 1621581 R COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG complement(1619710..1621581) Helicobacter pylori Gambia94/24 12361368 YP_005781255.1 CDS HPGAM_08035 NC_017371.1 1621658 1621996 D hypothetical protein 1621658..1621996 Helicobacter pylori Gambia94/24 12361369 YP_005781256.1 CDS HPGAM_08040 NC_017371.1 1622000 1622635 D hypothetical protein 1622000..1622635 Helicobacter pylori Gambia94/24 12361370 YP_005781257.1 CDS HPGAM_08045 NC_017371.1 1622632 1623384 R COG0708 Exonuclease III; exodeoxyribonuclease III complement(1622632..1623384) Helicobacter pylori Gambia94/24 12361371 YP_005781258.1 CDS HPGAM_08055 NC_017371.1 1623564 1625003 R hypothetical protein complement(1623564..1625003) Helicobacter pylori Gambia94/24 12361373 YP_005781259.1 CDS dnaA NC_017371.1 1625232 1626605 R COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein complement(1625232..1626605) Helicobacter pylori Gambia94/24 12361374 YP_005781260.1 CDS HPGAM_08065 NC_017371.1 1626757 1627299 D COG0813 Purine-nucleoside phosphorylase; hypothetical protein 1626757..1627299 Helicobacter pylori Gambia94/24 12361375 YP_005781261.1 CDS HPGAM_08070 NC_017371.1 1627334 1627573 D hypothetical protein 1627334..1627573 Helicobacter pylori Gambia94/24 12361376 YP_005781262.1 CDS HPGAM_08075 NC_017371.1 1627574 1629367 D COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 1627574..1629367 Helicobacter pylori Gambia94/24 12361377 YP_005781263.1 CDS thyX NC_017371.1 1629390 1630016 D COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 1629390..1630016 Helicobacter pylori Gambia94/24 12361378 YP_005781264.1 CDS HPGAM_08085 NC_017371.1 1630165 1630257 D hypothetical protein 1630165..1630257 Helicobacter pylori Gambia94/24 12361379 YP_005781265.1 CDS HPGAM_08090 NC_017371.1 1630263 1630364 R hypothetical protein complement(1630263..1630364) Helicobacter pylori Gambia94/24 12361380 YP_005781266.1 CDS HPGAM_08095 NC_017371.1 1630686 1630814 R hypothetical protein complement(1630686..1630814) Helicobacter pylori Gambia94/24 12361381 YP_005781267.1 CDS HPGAM_08100 NC_017371.1 1630975 1631598 R COG0732 Restriction endonuclease S subunits; typeI R-M system specificity subunit complement(1630975..1631598) Helicobacter pylori Gambia94/24 12361382 YP_005781268.1 CDS HPGAM_08105 NC_017371.1 1631592 1634045 R COG0286 Type I restriction-modification system methyltransferase subunit; Type I restriction-modification enzyme subunit M complement(1631592..1634045) Helicobacter pylori Gambia94/24 12361383 YP_005781269.1 CDS HPGAM_08110 NC_017371.1 1634114 1637089 D COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; typeI restriction enzyme R protein 1634114..1637089 Helicobacter pylori Gambia94/24 12361384 YP_005781270.1 CDS HPGAM_08115 NC_017371.1 1637089 1637796 D COG1451 Predicted metal-dependent hydrolase; hypothetical protein 1637089..1637796 Helicobacter pylori Gambia94/24 12361385 YP_005781271.1 CDS HPGAM_08120 NC_017371.1 1637880 1640405 R COG4772 Outer membrane receptor for Fe3+-dicitrate; putative IRON(III) dicitrate transport protein complement(1637880..1640405) Helicobacter pylori Gambia94/24 12361386 YP_005781272.1 CDS HPGAM_08125 NC_017371.1 1640980 1641948 R COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; arginase complement(1640980..1641948) Helicobacter pylori Gambia94/24 12361387 YP_005781273.1 CDS HPGAM_08130 NC_017371.1 1642153 1643295 D COG0686 Alanine dehydrogenase; alanine dehydrogenase 1642153..1643295 Helicobacter pylori Gambia94/24 12361388 YP_005781274.1 CDS HPGAM_08135 NC_017371.1 1643563 1644660 D COG1064 Zn-dependent alcohol dehydrogenases; zinc-dependent alcohol dehydrogenase 1643563..1644660 Helicobacter pylori Gambia94/24 12361389 YP_005781275.1 CDS HPGAM_08140 NC_017371.1 1644793 1646514 D COG1479 Uncharacterized conserved protein; hypothetical protein 1644793..1646514 Helicobacter pylori Gambia94/24 12361390 YP_005781276.1 CDS HPGAM_08145 NC_017371.1 1646525 1647253 R hypothetical protein complement(1646525..1647253) Helicobacter pylori Gambia94/24 12361391 YP_005781277.1 CDS HPGAM_08150 NC_017371.1 1647439 1648293 D COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 1647439..1648293 Helicobacter pylori Gambia94/24 12361392 YP_005781278.1 CDS HPGAM_08155 NC_017371.1 1648314 1649882 D COG0497 ATPase involved in DNA repair; DNA repair protein RecN 1648314..1649882 Helicobacter pylori Gambia94/24 12361393 YP_005781279.1 CDS HPGAM_08160 NC_017371.1 1649882 1651192 D COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; hypothetical protein 1649882..1651192 Helicobacter pylori Gambia94/24 12361394 YP_005781280.1 CDS HPGAM_08165 NC_017371.1 1651212 1651508 D hypothetical protein 1651212..1651508 Helicobacter pylori Gambia94/24 12361395 YP_005781281.1 CDS HPGAM_08170 NC_017371.1 1651662 1652639 D COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 1651662..1652639 Helicobacter pylori Gambia94/24 12361396 YP_005781282.1 CDS HPGAM_08175 NC_017371.1 1652686 1653549 R COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon complement(1652686..1653549) Helicobacter pylori Gambia94/24 12361397 YP_005781283.1 CDS HPGAM_08180 NC_017371.1 1653527 1654180 R COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase complement(1653527..1654180) Helicobacter pylori Gambia94/24 12361398 YP_005781284.1 CDS HPGAM_08185 NC_017371.1 1654251 1655123 D COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 1654251..1655123 Helicobacter pylori Gambia94/24 12361399 YP_005781285.1 CDS HPGAM_08190 NC_017371.1 1655123 1655326 D hypothetical protein 1655123..1655326 Helicobacter pylori Gambia94/24 12361400 YP_005781286.1 CDS HPGAM_08195 NC_017371.1 1655664 1656497 D type II restriction enzyme 1655664..1656497 Helicobacter pylori Gambia94/24 12361401 YP_005781287.1 CDS HPGAM_08200 NC_017371.1 1656585 1657226 D COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; putative transcriptional regulator 1656585..1657226 Helicobacter pylori Gambia94/24 12361402 YP_005781288.1 CDS tsf NC_017371.1 1657405 1658472 R COG0264 Translation elongation factor Ts; elongation factor Ts complement(1657405..1658472) Helicobacter pylori Gambia94/24 12361403 YP_005781289.1 CDS rpsB NC_017371.1 1658472 1659266 R COG0052 Ribosomal protein S2; 30S ribosomal protein S2 complement(1658472..1659266) Helicobacter pylori Gambia94/24 12361404 YP_005781290.1 CDS HPGAM_08215 NC_017371.1 1659516 1662356 D COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); putative recombination protein RecB 1659516..1662356 Helicobacter pylori Gambia94/24 12361405 YP_005781291.1 CDS nhaA NC_017371.1 1662380 1663696 D COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 1662380..1663696 Helicobacter pylori Gambia94/24 12361406 YP_005781292.1 CDS yajC NC_017371.1 1663744 1664127 D COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 1663744..1664127 Helicobacter pylori Gambia94/24 12361407 YP_005781293.1 CDS secD NC_017371.1 1664124 1665701 D COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 1664124..1665701 Helicobacter pylori Gambia94/24 12361408 YP_005781294.1 CDS secF NC_017371.1 1665710 1666681 D COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 1665710..1666681 Helicobacter pylori Gambia94/24 12361409 YP_005781295.1 CDS HPGAM_08240 NC_017371.1 1666691 1667029 D hypothetical protein 1666691..1667029 Helicobacter pylori Gambia94/24 12361410 YP_005781296.1 CDS leuS NC_017371.1 1667039 1669459 D COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 1667039..1669459 Helicobacter pylori Gambia94/24 12361411 YP_005781297.1 CDS HPGAM_08250 NC_017371.1 1669456 1669968 D hypothetical protein 1669456..1669968 Helicobacter pylori Gambia94/24 12361412 YP_005781298.1 CDS HPGAM_08255 NC_017371.1 1669958 1671127 D COG0285 Folylpolyglutamate synthase; folylpolyglutamate synthase 1669958..1671127 Helicobacter pylori Gambia94/24 12361413 YP_005781299.1 CDS HPGAM_08260 NC_017371.1 1671127 1672053 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 1671127..1672053 Helicobacter pylori Gambia94/24 12361414 YP_005781300.1 CDS HPGAM_08265 NC_017371.1 1672063 1673001 D COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 1672063..1673001 Helicobacter pylori Gambia94/24 12361415 YP_005781301.1 CDS HPGAM_08270 NC_017371.1 1672920 1673330 D COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 1672920..1673330 Helicobacter pylori Gambia94/24 12361416 YP_005781302.1 CDS HPGAM_08275 NC_017371.1 1673334 1676339 D COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 1673334..1676339 Helicobacter pylori Gambia94/24 12361417 YP_005781303.1 CDS HPGAM_08280 NC_017371.1 1676464 1676967 D COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1676464..1676967 Helicobacter pylori Gambia94/24 12361418 YP_005781304.1 CDS HPGAM_08285 NC_017371.1 1676978 1678216 D COG1290 Cytochrome b subunit of the bc complex; ubiquinol-cytochrome c reductase cytochrome b subunit 1676978..1678216 Helicobacter pylori Gambia94/24 12361419 YP_005781305.1 CDS HPGAM_08290 NC_017371.1 1678213 1679070 D COG2010 Cytochrome c, mono- and diheme variants; ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit 1678213..1679070 Helicobacter pylori Gambia94/24 12361420 YP_005781306.1 CDS HPGAM_08295 NC_017371.1 1679164 1679277 D hypothetical protein 1679164..1679277 Helicobacter pylori Gambia94/24 12361421 YP_005781307.1 CDS HPGAM_08310 NC_017371.1 1680386 1680922 D COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein 1680386..1680922 Helicobacter pylori Gambia94/24 12361422 YP_005781308.1 CDS HPGAM_08315 NC_017371.1 1681319 1683166 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein complement(1681319..1683166) Helicobacter pylori Gambia94/24 12361423 YP_005781309.1 CDS fliE NC_017371.1 1683317 1683646 R COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE complement(1683317..1683646) Helicobacter pylori Gambia94/24 12361424 YP_005781310.1 CDS flgC NC_017371.1 1683774 1684259 R COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC complement(1683774..1684259) Helicobacter pylori Gambia94/24 12361425 YP_005781311.1 CDS flgB NC_017371.1 1684273 1684695 R COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB complement(1684273..1684695) Helicobacter pylori Gambia94/24 12361426 YP_005781312.1 CDS HPGAM_08335 NC_017371.1 1684682 1684819 R hypothetical protein complement(1684682..1684819) Helicobacter pylori Gambia94/24 12361427 YP_005781313.1 CDS HPGAM_08340 NC_017371.1 1684901 1686067 D COG0772 Bacterial cell division membrane protein; cell division protein FtsW 1684901..1686067 Helicobacter pylori Gambia94/24 12361428 YP_005781314.1 CDS HPGAM_08345 NC_017371.1 1686087 1687094 R COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; ABC-type transport system, periplasmic component; putative signal peptide complement(1686087..1687094) Helicobacter pylori Gambia94/24 12361429 YP_005781315.1 CDS HPGAM_08350 NC_017371.1 1687332 1687928 D COG0450 Peroxiredoxin; Alkyl hydroperoxide reductase 1687332..1687928 Helicobacter pylori Gambia94/24 12361430 YP_005781316.1 CDS HPGAM_08355 NC_017371.1 1687970 1688101 D hypothetical protein 1687970..1688101 Helicobacter pylori Gambia94/24 12361431 YP_005781317.1 CDS HPGAM_08360 NC_017371.1 1688076 1688891 D COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; outer membrane protein 1688076..1688891 Helicobacter pylori Gambia94/24 12361432 YP_005781318.1 CDS HPGAM_08365 NC_017371.1 1689182 1689289 D hypothetical protein 1689182..1689289 Helicobacter pylori Gambia94/24 12361433 YP_005781319.1 CDS HPGAM_08370 NC_017371.1 1689383 1691149 R COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 complement(1689383..1691149) Helicobacter pylori Gambia94/24 12361434 YP_005781320.1 CDS HPGAM_08375 NC_017371.1 1691130 1691573 R hypothetical protein complement(1691130..1691573) Helicobacter pylori Gambia94/24 12361435 YP_005781321.1 CDS engB NC_017371.1 1691585 1692211 R COG0218 Predicted GTPase; GTP-binding protein YsxC complement(1691585..1692211) Helicobacter pylori Gambia94/24 12361436 YP_005781322.1 CDS HPGAM_08385 NC_017371.1 1692208 1692765 R COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1692208..1692765) Helicobacter pylori Gambia94/24 12361437 YP_005781323.1 CDS HPGAM_08390 NC_017371.1 1692765 1693358 R hypothetical protein complement(1692765..1693358) Helicobacter pylori Gambia94/24 12361438 YP_005781324.1 CDS HPGAM_08395 NC_017371.1 1693333 1693827 R COG1778 Low specificity phosphatase (HAD superfamily); 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase complement(1693333..1693827) Helicobacter pylori Gambia94/24 12361439 YP_005781325.1 CDS HPGAM_08400 NC_017371.1 1693824 1694768 R COG0797 Lipoproteins; rare lipoprotein A complement(1693824..1694768) Helicobacter pylori Gambia94/24 12361440 YP_005781326.1 CDS HPGAM_08405 NC_017371.1 1694768 1695880 R COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); regulatory protein DniR complement(1694768..1695880) Helicobacter pylori Gambia94/24 12361441 YP_005781327.1 CDS HPGAM_08410 NC_017371.1 1695976 1696740 R COG0084 Mg-dependent DNase; hypothetical protein complement(1695976..1696740) Helicobacter pylori Gambia94/24 12361442 YP_005781328.1 CDS HPGAM_08415 NC_017371.1 1696815 1697435 D COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1696815..1697435 Helicobacter pylori Gambia94/24 12361443 YP_005781329.1 CDS HPGAM_08420 NC_017371.1 1697436 1697708 D COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; hypothetical protein 1697436..1697708 Helicobacter pylori Gambia94/24 12361444 YP_005781330.1 CDS metN NC_017371.1 1697727 1698710 D COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 1697727..1698710 Helicobacter pylori Gambia94/24 12361445 YP_005781331.1 CDS HPGAM_08430 NC_017371.1 1698712 1699359 D COG2011 ABC-type metal ion transport system, permease component; D-methionine transport system permease 1698712..1699359 Helicobacter pylori Gambia94/24 12361446 YP_005781332.1 CDS HPGAM_08435 NC_017371.1 1699442 1699573 D hypothetical protein 1699442..1699573 Helicobacter pylori Gambia94/24 12361447 YP_005781333.1 CDS HPGAM_08440 NC_017371.1 1699549 1699980 R hypothetical protein complement(1699549..1699980) Helicobacter pylori Gambia94/24 12361448 YP_005781334.1 CDS HPGAM_08445 NC_017371.1 1699990 1700586 R COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein complement(1699990..1700586) Helicobacter pylori Gambia94/24 12361449 YP_005781335.1 CDS HPGAM_08450 NC_017371.1 1700586 1701593 R COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; putative undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase complement(1700586..1701593) Helicobacter pylori Gambia94/24 12361450 YP_005781336.1 CDS HPGAM_08455 NC_017371.1 1701733 1702521 D COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 1701733..1702521 Helicobacter pylori Gambia94/24 12361451 YP_005781337.1 CDS pdxA NC_017371.1 1702523 1703446 D COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 1702523..1703446 Helicobacter pylori Gambia94/24 12361452 YP_005781338.1 CDS HPGAM_08465 NC_017371.1 1703648 1704670 D COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 1703648..1704670 Helicobacter pylori Gambia94/24 12361453 YP_005781339.1 CDS flgG NC_017371.1 1705549 1706337 D COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 1705549..1706337 Helicobacter pylori Gambia94/24 12361454 YP_005781340.1 CDS HPGAM_08475 NC_017371.1 1706334 1706432 R hypothetical protein complement(1706334..1706432) Helicobacter pylori Gambia94/24 12361455 YP_005781341.1 CDS HPGAM_08480 NC_017371.1 1706436 1706828 R hypothetical protein complement(1706436..1706828) Helicobacter pylori Gambia94/24 12361456 YP_005781342.1 CDS HPGAM_08485 NC_017371.1 1706903 1707487 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1706903..1707487) Helicobacter pylori Gambia94/24 12361457 YP_005781343.1 CDS HPGAM_08490 NC_017371.1 1708050 1708190 R hypothetical protein complement(1708050..1708190) Helicobacter pylori Gambia94/24 12361458 YP_005781344.1 CDS HPGAM_08495 NC_017371.1 1708277 1709038 R COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein complement(1708277..1709038) Helicobacter pylori Gambia94/24 12361459 YP_005781345.1 CDS HPGAM_08500 NC_017371.1 1709404 1709562 R hypothetical protein complement(1709404..1709562) Helicobacter pylori Gambia94/24 12361460 HPGAM_t08507 tRNA HPGAM_t08507 NC_017371.1 4040 4115 R tRNA-Glu complement(4040..4115) Helicobacter pylori Gambia94/24 12361216 HPGAM_t08509 tRNA HPGAM_t08509 NC_017371.1 4179 4255 R tRNA-Asp complement(4179..4255) Helicobacter pylori Gambia94/24 12361218 HPGAM_t08511 tRNA HPGAM_t08511 NC_017371.1 4306 4381 R tRNA-Val complement(4306..4381) Helicobacter pylori Gambia94/24 12361290 HPGAM_t08513 tRNA HPGAM_t08513 NC_017371.1 4419 4493 R tRNA-Glu complement(4419..4493) Helicobacter pylori Gambia94/24 12359815 HPGAM_t08515 tRNA HPGAM_t08515 NC_017371.1 4506 4581 R tRNA-Lys complement(4506..4581) Helicobacter pylori Gambia94/24 12359816 HPGAM_t08517 tRNA HPGAM_t08517 NC_017371.1 79137 79212 R tRNA-Val complement(79137..79212) Helicobacter pylori Gambia94/24 12359884 HPGAM_t08519 tRNA HPGAM_t08519 NC_017371.1 97874 97965 D tRNA-Ser 97874..97965 Helicobacter pylori Gambia94/24 12359904 HPGAM_t08521 tRNA HPGAM_t08521 NC_017371.1 254010 254084 R tRNA-Asn complement(254010..254084) Helicobacter pylori Gambia94/24 12360061 HPGAM_t08523 tRNA HPGAM_t08523 NC_017371.1 277094 277169 R tRNA-Ala complement(277094..277169) Helicobacter pylori Gambia94/24 12360087 HPGAM_t08525 tRNA HPGAM_t08525 NC_017371.1 360029 360105 D tRNA-Arg 360029..360105 Helicobacter pylori Gambia94/24 12360167 HPGAM_t08527 tRNA HPGAM_t08527 NC_017371.1 410014 410101 R tRNA-Ser complement(410014..410101) Helicobacter pylori Gambia94/24 12360216 HPGAM_t08529 tRNA HPGAM_t08529 NC_017371.1 461364 461441 R tRNA-Pro complement(461364..461441) Helicobacter pylori Gambia94/24 12360272 HPGAM_t08531 tRNA HPGAM_t08531 NC_017371.1 781976 782052 R tRNA-Met complement(781976..782052) Helicobacter pylori Gambia94/24 12360548 HPGAM_t08533 tRNA HPGAM_t08533 NC_017371.1 872615 872691 D tRNA-Arg 872615..872691 Helicobacter pylori Gambia94/24 12360640 HPGAM_t08535 tRNA HPGAM_t08535 NC_017371.1 935212 935288 R tRNA-Met complement(935212..935288) Helicobacter pylori Gambia94/24 12360702 HPGAM_t08537 tRNA HPGAM_t08537 NC_017371.1 935321 935395 R tRNA-Gln complement(935321..935395) Helicobacter pylori Gambia94/24 12360703 HPGAM_t08539 tRNA HPGAM_t08539 NC_017371.1 993756 993830 D tRNA-Gly 993756..993830 Helicobacter pylori Gambia94/24 12360753 HPGAM_t08541 tRNA HPGAM_t08541 NC_017371.1 993870 993956 D tRNA-Leu 993870..993956 Helicobacter pylori Gambia94/24 12360754 HPGAM_t08543 tRNA HPGAM_t08543 NC_017371.1 994015 994089 D tRNA-Cys 994015..994089 Helicobacter pylori Gambia94/24 12360755 HPGAM_t08545 tRNA HPGAM_t08545 NC_017371.1 994138 994225 D tRNA-Ser 994138..994225 Helicobacter pylori Gambia94/24 12360756 HPGAM_t08547 tRNA HPGAM_t08547 NC_017371.1 1089023 1089099 R tRNA-Arg complement(1089023..1089099) Helicobacter pylori Gambia94/24 12360831 HPGAM_t08549 tRNA HPGAM_t08549 NC_017371.1 1089121 1089197 R tRNA-Arg complement(1089121..1089197) Helicobacter pylori Gambia94/24 12360832 HPGAM_t08551 tRNA HPGAM_t08551 NC_017371.1 1089257 1089333 R tRNA-His complement(1089257..1089333) Helicobacter pylori Gambia94/24 12360833 HPGAM_t08553 tRNA HPGAM_t08553 NC_017371.1 1089400 1089477 R tRNA-Pro complement(1089400..1089477) Helicobacter pylori Gambia94/24 12360834 HPGAM_t08555 tRNA HPGAM_t08555 NC_017371.1 1141000 1141084 R tRNA-Leu complement(1141000..1141084) Helicobacter pylori Gambia94/24 12360880 HPGAM_t08557 tRNA HPGAM_t08557 NC_017371.1 1145874 1145950 D tRNA-Ile 1145874..1145950 Helicobacter pylori Gambia94/24 12360886 HPGAM_t08559 tRNA HPGAM_t08559 NC_017371.1 1145968 1146043 D tRNA-Ala 1145968..1146043 Helicobacter pylori Gambia94/24 12360887 HPGAM_t08561 tRNA HPGAM_t08561 NC_017371.1 1242794 1242871 R tRNA-Met complement(1242794..1242871) Helicobacter pylori Gambia94/24 12360982 HPGAM_t08563 tRNA HPGAM_t08563 NC_017371.1 1271432 1271507 R tRNA-Trp complement(1271432..1271507) Helicobacter pylori Gambia94/24 12361005 HPGAM_t08565 tRNA HPGAM_t08565 NC_017371.1 1273088 1273162 R tRNA-Thr complement(1273088..1273162) Helicobacter pylori Gambia94/24 12361008 HPGAM_t08567 tRNA HPGAM_t08567 NC_017371.1 1273193 1273269 R tRNA-Gly complement(1273193..1273269) Helicobacter pylori Gambia94/24 12361009 HPGAM_t08569 tRNA HPGAM_t08569 NC_017371.1 1273286 1273370 R tRNA-Tyr complement(1273286..1273370) Helicobacter pylori Gambia94/24 12361010 HPGAM_t08571 tRNA HPGAM_t08571 NC_017371.1 1273398 1273473 R tRNA-Thr complement(1273398..1273473) Helicobacter pylori Gambia94/24 12361011 HPGAM_t08573 tRNA HPGAM_t08573 NC_017371.1 1278952 1279038 R tRNA-Leu complement(1278952..1279038) Helicobacter pylori Gambia94/24 12361018 HPGAM_t08575 tRNA HPGAM_t08575 NC_017371.1 1279091 1279177 R tRNA-Leu complement(1279091..1279177) Helicobacter pylori Gambia94/24 12361020 HPGAM_t08577 tRNA HPGAM_t08577 NC_017371.1 1623486 1623561 D tRNA-Phe 1623486..1623561 Helicobacter pylori Gambia94/24 12361372 HPGAM_r08579 rRNA HPGAM_r08579 NC_017371.1 1069579 1069696 R 5S ribosomal RNA complement(1069579..1069696) Helicobacter pylori Gambia94/24 12360816 HPGAM_r08587 rRNA HPGAM_r08587 NC_017371.1 1069940 1072817 R 23S ribosomal RNA complement(1069940..1072817) Helicobacter pylori Gambia94/24 12360817 HPGAM_r08583 rRNA HPGAM_r08583 NC_017371.1 1200705 1202211 R 16S ribosomal RNA complement(1200705..1202211) Helicobacter pylori Gambia94/24 12360940 HPGAM_r08581 rRNA HPGAM_r08581 NC_017371.1 1444311 1444428 R 5S ribosomal RNA complement(1444311..1444428) Helicobacter pylori Gambia94/24 12361207 HPGAM_r08589 rRNA HPGAM_r08589 NC_017371.1 1444672 1447549 R 23S ribosomal RNA complement(1444672..1447549) Helicobacter pylori Gambia94/24 12361208 HPGAM_r08585 rRNA HPGAM_r08585 NC_017371.1 1526623 1528129 R 16S ribosomal RNA complement(1526623..1528129) Helicobacter pylori Gambia94/24 12361281