-- dump date 20140619_113353 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005773746.1 385219872 12228671 91..1701 1 NC_017364.1 hypothetical protein 1701 12228671 HPGAM_08589 Helicobacter pylori Gambia94/24 hypothetical protein YP_005773746.1 91 D 907240 CDS YP_005779742.1 385218267 12361017 complement(11..427) 1 NC_017371.1 COG0781 Transcription termination factor; transcription antitermination protein NusB 427 nusB 12361017 nusB Helicobacter pylori Gambia94/24 transcription antitermination protein NusB YP_005779742.1 11 R 907240 CDS YP_005779743.1 385218268 12361019 complement(429..899) 1 NC_017371.1 COG0054 Riboflavin synthase beta-chain; 6,7-dimethyl-8-ribityllumazine synthase 899 ribH 12361019 ribH Helicobacter pylori Gambia94/24 6,7-dimethyl-8-ribityllumazine synthase YP_005779743.1 429 R 907240 CDS YP_005779744.1 385218269 12361021 complement(909..1739) 1 NC_017371.1 COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; 2-dehydro-3-deoxyphosphooctonate aldolase 1739 12361021 HPGAM_00015 Helicobacter pylori Gambia94/24 2-dehydro-3-deoxyphosphooctonate aldolase YP_005779744.1 909 R 907240 CDS YP_005779745.1 385218270 12361023 complement(1743..2390) 1 NC_017371.1 COG0288 Carbonic anhydrase; carbonic anhydrase 2390 12361023 HPGAM_00020 Helicobacter pylori Gambia94/24 carbonic anhydrase YP_005779745.1 1743 R 907240 CDS YP_005779746.1 385218271 12361030 2513..3196 1 NC_017371.1 COG0284 Orotidine-5'-phosphate decarboxylase; orotidine 5'-phosphate decarboxylase 3196 12361030 HPGAM_00025 Helicobacter pylori Gambia94/24 orotidine 5'-phosphate decarboxylase YP_005779746.1 2513 D 907240 CDS YP_005779747.1 385218272 12361032 3196..4026 1 NC_017371.1 COG0414 Panthothenate synthetase; pantoate--beta-alanine ligase 4026 panC 12361032 panC Helicobacter pylori Gambia94/24 pantoate--beta-alanine ligase YP_005779747.1 3196 D 907240 CDS YP_005779748.1 385218273 12359817 complement(5115..5276) 1 NC_017371.1 hypothetical protein 5276 12359817 HPGAM_00035 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779748.1 5115 R 907240 CDS YP_005779749.1 385218274 12359818 complement(5487..7499) 1 NC_017371.1 putative Outer membrane protein 7499 12359818 HPGAM_00040 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005779749.1 5487 R 907240 CDS YP_005779750.1 385218275 12359819 complement(7677..7826) 1 NC_017371.1 hypothetical protein 7826 12359819 HPGAM_00045 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779750.1 7677 R 907240 CDS YP_005779751.1 385218276 12359820 complement(7833..9473) 1 NC_017371.1 COG0459 Chaperonin GroEL (HSP60 family); chaperonin GroEL 9473 groEL 12359820 groEL Helicobacter pylori Gambia94/24 chaperonin GroEL YP_005779751.1 7833 R 907240 CDS YP_005779752.1 385218277 12359821 complement(9500..9856) 1 NC_017371.1 COG0234 Co-chaperonin GroES (HSP10); co-chaperonin GroES 9856 groES 12359821 groES Helicobacter pylori Gambia94/24 co-chaperonin GroES YP_005779752.1 9500 R 907240 CDS YP_005779753.1 385218278 12359822 10133..11812 1 NC_017371.1 COG0358 DNA primase (bacterial type); DNA primase 11812 dnaG 12359822 dnaG Helicobacter pylori Gambia94/24 DNA primase YP_005779753.1 10133 D 907240 CDS YP_005779754.1 385218279 12359823 11809..12861 1 NC_017371.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; hypothetical protein 12861 12359823 HPGAM_00065 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779754.1 11809 D 907240 CDS YP_005779755.1 385218280 12359824 12954..13781 1 NC_017371.1 hypothetical protein 13781 12359824 HPGAM_00070 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779755.1 12954 D 907240 CDS YP_005779756.1 385218281 12359825 13926..14207 1 NC_017371.1 hypothetical protein 14207 12359825 HPGAM_00075 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779756.1 13926 D 907240 CDS YP_005779757.1 385218282 12359826 14207..14470 1 NC_017371.1 hypothetical protein 14470 12359826 HPGAM_00080 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779757.1 14207 D 907240 CDS YP_005779758.1 385218283 12359827 14472..16835 1 NC_017371.1 COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein 16835 12359827 HPGAM_00085 Helicobacter pylori Gambia94/24 DNA transfer protein YP_005779758.1 14472 D 907240 CDS YP_005779759.1 385218284 12359828 17140..18480 1 NC_017371.1 COG3014 Uncharacterized protein conserved in bacteria; hypothetical protein 18480 12359828 HPGAM_00090 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779759.1 17140 D 907240 CDS YP_005779760.1 385218285 12359829 18586..19551 1 NC_017371.1 COG0835 Chemotaxis signal transduction protein; chemotaxis protein (cheV) 19551 12359829 HPGAM_00095 Helicobacter pylori Gambia94/24 chemotaxis protein (cheV) YP_005779760.1 18586 D 907240 CDS YP_005779761.1 385218286 12359830 19548..20765 1 NC_017371.1 COG0019 Diaminopimelate decarboxylase; carboxynorspermidine decarboxylase 20765 12359830 HPGAM_00100 Helicobacter pylori Gambia94/24 carboxynorspermidine decarboxylase YP_005779761.1 19548 D 907240 CDS YP_005779762.1 385218287 12359831 complement(20804..21376) 1 NC_017371.1 COG0671 Membrane-associated phospholipid phosphatase; lipid A 1-phosphatase 21376 12359831 HPGAM_00105 Helicobacter pylori Gambia94/24 lipid A 1-phosphatase YP_005779762.1 20804 R 907240 CDS YP_005779763.1 385218288 12359832 complement(21387..22958) 1 NC_017371.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; lipid A phosphoethanolamine transferase 22958 12359832 HPGAM_00110 Helicobacter pylori Gambia94/24 lipid A phosphoethanolamine transferase YP_005779763.1 21387 R 907240 CDS YP_005779764.1 385218289 12359833 complement(23572..25647) 1 NC_017371.1 outer membrane protein HopD 25647 12359833 HPGAM_00115 Helicobacter pylori Gambia94/24 outer membrane protein HopD YP_005779764.1 23572 R 907240 CDS YP_005779765.1 385218290 12359834 25921..26118 1 NC_017371.1 hypothetical protein 26118 12359834 HPGAM_00120 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779765.1 25921 D 907240 CDS YP_005779766.1 385218291 12359835 complement(26220..27500) 1 NC_017371.1 COG0372 Citrate synthase; type II citrate synthase 27500 gltA 12359835 gltA Helicobacter pylori Gambia94/24 type II citrate synthase YP_005779766.1 26220 R 907240 CDS YP_005779767.1 385218292 12359836 27701..28978 1 NC_017371.1 COG0538 Isocitrate dehydrogenases; isocitrate dehydrogenase 28978 12359836 HPGAM_00130 Helicobacter pylori Gambia94/24 isocitrate dehydrogenase YP_005779767.1 27701 D 907240 CDS YP_005779768.1 385218293 12359837 29043..29570 1 NC_017371.1 hypothetical protein 29570 12359837 HPGAM_00135 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779768.1 29043 D 907240 CDS YP_005779769.1 385218294 12359838 complement(29547..30203) 1 NC_017371.1 COG0132 Dethiobiotin synthetase; dethiobiotin synthetase 30203 12359838 HPGAM_00140 Helicobacter pylori Gambia94/24 dethiobiotin synthetase YP_005779769.1 29547 R 907240 CDS YP_005779770.1 385218295 12359839 complement(30207..32000) 1 NC_017371.1 hypothetical protein 32000 12359839 HPGAM_00145 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779770.1 30207 R 907240 CDS YP_005779771.1 385218296 12359840 32111..32524 1 NC_017371.1 COG0589 Universal stress protein UspA and related nucleotide-binding proteins; putative universal stress global response regulator UspA 32524 12359840 HPGAM_00150 Helicobacter pylori Gambia94/24 putative universal stress global response regulator UspA YP_005779771.1 32111 D 907240 CDS YP_005779772.1 385218297 12359841 32526..32801 1 NC_017371.1 COG2127 Uncharacterized conserved protein; ATP-dependent Clp protease adapter protein ClpS 32801 12359841 HPGAM_00155 Helicobacter pylori Gambia94/24 ATP-dependent Clp protease adapter protein ClpS YP_005779772.1 32526 D 907240 CDS YP_005779773.1 385218298 12359842 32801..35029 1 NC_017371.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; ATP-dependent protease,ATP-binding subunit 35029 12359842 HPGAM_00160 Helicobacter pylori Gambia94/24 ATP-dependent protease,ATP-binding subunit YP_005779773.1 32801 D 907240 CDS YP_005779774.1 385218299 12359843 35019..35372 1 NC_017371.1 COG0853 Aspartate 1-decarboxylase; aspartate alpha-decarboxylase 35372 12359843 HPGAM_00165 Helicobacter pylori Gambia94/24 aspartate alpha-decarboxylase YP_005779774.1 35019 D 907240 CDS YP_005779775.1 385218300 12359844 35375..35677 1 NC_017371.1 COG0718 Uncharacterized protein conserved in bacteria; hypothetical protein 35677 12359844 HPGAM_00170 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779775.1 35375 D 907240 CDS YP_005779776.1 385218301 12359845 35677..36681 1 NC_017371.1 hypothetical protein 36681 12359845 HPGAM_00175 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779776.1 35677 D 907240 CDS YP_005779777.1 385218302 12359846 36689..37744 1 NC_017371.1 hypothetical protein 37744 12359846 HPGAM_00180 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779777.1 36689 D 907240 CDS YP_005779778.1 385218303 12359847 37760..37873 1 NC_017371.1 Comb7 competence protein 37873 12359847 HPGAM_00185 Helicobacter pylori Gambia94/24 Comb7 competence protein YP_005779778.1 37760 D 907240 CDS YP_005779779.1 385218304 12359848 37870..38613 1 NC_017371.1 COG3736 Type IV secretory pathway, component VirB8; type IV secretion system protein VirB8 38613 12359848 HPGAM_00190 Helicobacter pylori Gambia94/24 type IV secretion system protein VirB8 YP_005779779.1 37870 D 907240 CDS YP_005779780.1 385218305 12359849 38613..39599 1 NC_017371.1 COG3504 Type IV secretory pathway, VirB9 components; DNA transformation compentancy 39599 12359849 HPGAM_00195 Helicobacter pylori Gambia94/24 DNA transformation compentancy YP_005779780.1 38613 D 907240 CDS YP_005779781.1 385218306 12359850 39592..40722 1 NC_017371.1 COG2948 Type IV secretory pathway, VirB10 components; DNA transformation compentancy 40722 12359850 HPGAM_00200 Helicobacter pylori Gambia94/24 DNA transformation compentancy YP_005779781.1 39592 D 907240 CDS YP_005779782.1 385218307 12359851 40792..42204 1 NC_017371.1 COG0836 Mannose-1-phosphate guanylyltransferase; mannose-1-phosphate guanyltransferase 42204 12359851 HPGAM_00205 Helicobacter pylori Gambia94/24 mannose-1-phosphate guanyltransferase YP_005779782.1 40792 D 907240 CDS YP_005779783.1 385218308 12359852 42249..43394 1 NC_017371.1 COG1089 GDP-D-mannose dehydratase; GDP-D-mannose dehydratase 43394 12359852 HPGAM_00210 Helicobacter pylori Gambia94/24 GDP-D-mannose dehydratase YP_005779783.1 42249 D 907240 CDS YP_005779784.1 385218309 12359853 43387..44319 1 NC_017371.1 COG0451 Nucleoside-diphosphate-sugar epimerases; putative sugar nucleotide biosynthesis 44319 12359853 HPGAM_00215 Helicobacter pylori Gambia94/24 putative sugar nucleotide biosynthesis YP_005779784.1 43387 D 907240 CDS YP_005779785.1 385218310 12359854 complement(44623..44727) 1 NC_017371.1 hypothetical protein 44727 12359854 HPGAM_00220 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779785.1 44623 R 907240 CDS YP_005779786.1 385218311 12359855 complement(44708..45142) 1 NC_017371.1 hypothetical protein 45142 12359855 HPGAM_00225 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779786.1 44708 R 907240 CDS YP_005779787.1 385218312 12359856 complement(45319..46317) 1 NC_017371.1 COG0309 Hydrogenase maturation factor; hydrogenase expression/formation protein 46317 12359856 HPGAM_00230 Helicobacter pylori Gambia94/24 hydrogenase expression/formation protein YP_005779787.1 45319 R 907240 CDS YP_005779788.1 385218313 12359857 complement(46320..48572) 1 NC_017371.1 COG0068 Hydrogenase maturation factor; putative transcriptional regulator 48572 12359857 HPGAM_00235 Helicobacter pylori Gambia94/24 putative transcriptional regulator YP_005779788.1 46320 R 907240 CDS YP_005779789.1 385218314 12359858 complement(48569..49561) 1 NC_017371.1 COG2957 Peptidylarginine deiminase and related enzymes; hypothetical protein 49561 12359858 HPGAM_00240 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779789.1 48569 R 907240 CDS YP_005779790.1 385218315 12359859 complement(49620..50312) 1 NC_017371.1 COG0863 DNA modification methylase; putative type II DNA modification enzyme (methyltransferase) 50312 12359859 HPGAM_00245 Helicobacter pylori Gambia94/24 putative type II DNA modification enzyme (methyltransferase) YP_005779790.1 49620 R 907240 CDS YP_005779791.1 385218316 12359860 complement(50290..50847) 1 NC_017371.1 COG0270 Site-specific DNA methylase; putative type II DNA modification enzyme (methyltransferase) 50847 12359860 HPGAM_00250 Helicobacter pylori Gambia94/24 putative type II DNA modification enzyme (methyltransferase) YP_005779791.1 50290 R 907240 CDS YP_005779792.1 385218317 12359861 complement(51298..52329) 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; putative type II DNA modification enzyme (methyltransferase) 52329 12359861 HPGAM_00255 Helicobacter pylori Gambia94/24 putative type II DNA modification enzyme (methyltransferase) YP_005779792.1 51298 R 907240 CDS YP_005779793.1 385218318 12359862 complement(52339..53121) 1 NC_017371.1 putative type II restriction enzyme 53121 12359862 HPGAM_00260 Helicobacter pylori Gambia94/24 putative type II restriction enzyme YP_005779793.1 52339 R 907240 CDS YP_005779794.1 385218319 12359863 complement(53244..53345) 1 NC_017371.1 putative type II DNA modification enzyme (methyltransferase) 53345 12359863 HPGAM_00265 Helicobacter pylori Gambia94/24 putative type II DNA modification enzyme (methyltransferase) YP_005779794.1 53244 R 907240 CDS YP_005779795.1 385218320 12359864 complement(53603..54760) 1 NC_017371.1 hypothetical protein 54760 12359864 HPGAM_00270 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779795.1 53603 R 907240 CDS YP_005779796.1 385218321 12359865 complement(54760..57228) 1 NC_017371.1 COG0270 Site-specific DNA methylase; type II R-M system methyltransferase 57228 12359865 HPGAM_00275 Helicobacter pylori Gambia94/24 type II R-M system methyltransferase YP_005779796.1 54760 R 907240 CDS YP_005779797.1 385218322 12359866 complement(57269..58759) 1 NC_017371.1 COG0591 Na+/proline symporter; sodium/proline symporter 58759 12359866 HPGAM_00280 Helicobacter pylori Gambia94/24 sodium/proline symporter YP_005779797.1 57269 R 907240 CDS YP_005779798.1 385218323 12359867 complement(58786..62343) 1 NC_017371.1 COG0506 Proline dehydrogenase; proline/delta 1-pyrroline-5-carboxylate dehydrogenase 62343 12359867 HPGAM_00285 Helicobacter pylori Gambia94/24 proline/delta 1-pyrroline-5-carboxylate dehydrogenase YP_005779798.1 58786 R 907240 CDS YP_005779799.1 385218324 12359868 62665..62874 1 NC_017371.1 hypothetical protein 62874 12359868 HPGAM_00290 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779799.1 62665 D 907240 CDS YP_005779800.1 385218325 12359869 62988..63095 1 NC_017371.1 hypothetical protein 63095 12359869 HPGAM_00295 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779800.1 62988 D 907240 CDS YP_005779801.1 385218326 12359870 63655..63924 1 NC_017371.1 hypothetical protein 63924 12359870 HPGAM_00300 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779801.1 63655 D 907240 CDS YP_005779802.1 385218327 12359871 67322..67891 1 NC_017371.1 hypothetical protein 67891 12359871 HPGAM_00325 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779802.1 67322 D 907240 CDS YP_005779803.1 385218328 12359872 67907..68167 1 NC_017371.1 hypothetical protein 68167 12359872 HPGAM_00330 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779803.1 67907 D 907240 CDS YP_005779804.1 385218329 12359873 68178..69671 1 NC_017371.1 hypothetical protein 69671 12359873 HPGAM_00335 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779804.1 68178 D 907240 CDS YP_005779805.1 385218330 12359874 69641..70060 1 NC_017371.1 hypothetical protein 70060 12359874 HPGAM_00340 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779805.1 69641 D 907240 CDS YP_005779806.1 385218331 12359875 70065..70409 1 NC_017371.1 hypothetical protein 70409 12359875 HPGAM_00345 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779806.1 70065 D 907240 CDS YP_005779807.1 385218332 12359876 70406..71020 1 NC_017371.1 ATP-binding protein 71020 12359876 HPGAM_00350 Helicobacter pylori Gambia94/24 ATP-binding protein YP_005779807.1 70406 D 907240 CDS YP_005779808.1 385218333 12359877 complement(72895..73692) 1 NC_017371.1 COG0829 Urease accessory protein UreH; Urease accessory protein UreH 73692 12359877 HPGAM_00365 Helicobacter pylori Gambia94/24 Urease accessory protein UreH YP_005779808.1 72895 R 907240 CDS YP_005779809.1 385218334 12359878 complement(73692..74291) 1 NC_017371.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; urease accessory protein UreG 74291 12359878 HPGAM_00370 Helicobacter pylori Gambia94/24 urease accessory protein UreG YP_005779809.1 73692 R 907240 CDS YP_005779810.1 385218335 12359879 complement(74320..75090) 1 NC_017371.1 COG0830 Urease accessory protein UreF; urease accessory protein 75090 12359879 HPGAM_00375 Helicobacter pylori Gambia94/24 urease accessory protein YP_005779810.1 74320 R 907240 CDS YP_005779811.1 385218336 12359880 complement(75114..75626) 1 NC_017371.1 COG2371 Urease accessory protein UreE; urease accessory protein UreE 75626 ureE 12359880 ureE Helicobacter pylori Gambia94/24 urease accessory protein UreE YP_005779811.1 75114 R 907240 CDS YP_005779812.1 385218337 12359881 complement(75628..76215) 1 NC_017371.1 COG1138 Cytochrome c biogenesis factor; urea transporter 76215 12359881 HPGAM_00385 Helicobacter pylori Gambia94/24 urea transporter YP_005779812.1 75628 R 907240 CDS YP_005779813.1 385218338 12359882 complement(76438..78147) 1 NC_017371.1 COG0804 Urea amidohydrolase (urease) alpha subunit; urease subunit beta 78147 ureB 12359882 ureB Helicobacter pylori Gambia94/24 urease subunit beta YP_005779813.1 76438 R 907240 CDS YP_005779814.1 385218339 12359883 complement(78151..78867) 1 NC_017371.1 COG0831 Urea amidohydrolase (urease) gamma subunit; urease subunit alpha 78867 12359883 HPGAM_00395 Helicobacter pylori Gambia94/24 urease subunit alpha YP_005779814.1 78151 R 907240 CDS YP_005779815.1 385218340 12359885 complement(79231..79716) 1 NC_017371.1 COG0597 Lipoprotein signal peptidase; lipoprotein signal peptidase 79716 lspA 12359885 lspA Helicobacter pylori Gambia94/24 lipoprotein signal peptidase YP_005779815.1 79231 R 907240 CDS YP_005779816.1 385218341 12359886 complement(79697..81034) 1 NC_017371.1 COG1109 Phosphomannomutase; phosphoglucosamine mutase 81034 glmM 12359886 glmM Helicobacter pylori Gambia94/24 phosphoglucosamine mutase YP_005779816.1 79697 R 907240 CDS YP_005779817.1 385218342 12359887 81124..81393 1 NC_017371.1 COG0268 Ribosomal protein S20; 30S ribosomal protein S20 81393 rpsT 12359887 rpsT Helicobacter pylori Gambia94/24 30S ribosomal protein S20 YP_005779817.1 81124 D 907240 CDS YP_005779818.1 385218343 12359888 81520..82578 1 NC_017371.1 COG0216 Protein chain release factor A; peptide chain release factor 1 82578 prfA 12359888 prfA Helicobacter pylori Gambia94/24 peptide chain release factor 1 YP_005779818.1 81520 D 907240 CDS YP_005779819.1 385218344 12359889 82975..83229 1 NC_017371.1 hypothetical protein 83229 12359889 HPGAM_00420 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779819.1 82975 D 907240 CDS YP_005779820.1 385218345 12359890 83240..85048 1 NC_017371.1 outer membrane protein (omp3) 85048 12359890 HPGAM_00425 Helicobacter pylori Gambia94/24 outer membrane protein (omp3) YP_005779820.1 83240 D 907240 CDS YP_005779821.1 385218346 12359891 85298..87070 1 NC_017371.1 hypothetical protein 87070 12359891 HPGAM_00430 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779821.1 85298 D 907240 CDS YP_005779822.1 385218347 12359892 87180..87290 1 NC_017371.1 hypothetical protein 87290 12359892 HPGAM_00435 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779822.1 87180 D 907240 CDS YP_005779823.1 385218348 12359893 complement(87485..89506) 1 NC_017371.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 89506 12359893 HPGAM_00440 Helicobacter pylori Gambia94/24 methyl-accepting chemotaxis protein YP_005779823.1 87485 R 907240 CDS YP_005779824.1 385218349 12359894 89540..89677 1 NC_017371.1 hypothetical protein 89677 12359894 HPGAM_00445 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779824.1 89540 D 907240 CDS YP_005779825.1 385218350 12359895 complement(89681..90070) 1 NC_017371.1 COG0103 Ribosomal protein S9; 30S ribosomal protein S9 90070 rpsI 12359895 rpsI Helicobacter pylori Gambia94/24 30S ribosomal protein S9 YP_005779825.1 89681 R 907240 CDS YP_005779826.1 385218351 12359896 complement(90067..90492) 1 NC_017371.1 COG0102 Ribosomal protein L13; 50S ribosomal protein L13 90492 rplM 12359896 rplM Helicobacter pylori Gambia94/24 50S ribosomal protein L13 YP_005779826.1 90067 R 907240 CDS YP_005779827.1 385218352 12359897 complement(90588..90704) 1 NC_017371.1 hypothetical protein 90704 12359897 HPGAM_00460 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779827.1 90588 R 907240 CDS YP_005779828.1 385218353 12359898 complement(90846..91034) 1 NC_017371.1 hypothetical protein 91034 12359898 HPGAM_00465 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779828.1 90846 R 907240 CDS YP_005779829.1 385218354 12359899 complement(91041..92393) 1 NC_017371.1 COG0579 Predicted dehydrogenase; hypothetical protein 92393 12359899 HPGAM_00470 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779829.1 91041 R 907240 CDS YP_005779830.1 385218355 12359900 complement(92447..93820) 1 NC_017371.1 COG0791 Cell wall-associated hydrolases (invasion-associated proteins); hypothetical protein 93820 12359900 HPGAM_00475 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779830.1 92447 R 907240 CDS YP_005779831.1 385218356 12359901 complement(93840..95885) 1 NC_017371.1 COG0568 DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32); RNA polymerase sigma factor RpoD 95885 12359901 HPGAM_00480 Helicobacter pylori Gambia94/24 RNA polymerase sigma factor RpoD YP_005779831.1 93840 R 907240 CDS YP_005779832.1 385218357 12359902 complement(96109..96804) 1 NC_017371.1 COG0775 Nucleoside phosphorylase; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 96804 12359902 HPGAM_00485 Helicobacter pylori Gambia94/24 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_005779832.1 96109 R 907240 CDS YP_005779833.1 385218358 12359903 complement(96815..97744) 1 NC_017371.1 COG0331 (acyl-carrier-protein) S-malonyltransferase; malonyl CoA-acyl carrier protein transacylase 97744 12359903 HPGAM_00490 Helicobacter pylori Gambia94/24 malonyl CoA-acyl carrier protein transacylase YP_005779833.1 96815 R 907240 CDS YP_005779834.1 385218359 12359905 98185..99171 1 NC_017371.1 COG2958 Uncharacterized protein conserved in bacteria; HrgA protein 99171 12359905 HPGAM_00495 Helicobacter pylori Gambia94/24 HrgA protein YP_005779834.1 98185 D 907240 CDS YP_005779835.1 385218360 12359906 99175..99999 1 NC_017371.1 COG0863 DNA modification methylase; type II adenine methyltransferase 99999 12359906 HPGAM_00500 Helicobacter pylori Gambia94/24 type II adenine methyltransferase YP_005779835.1 99175 D 907240 CDS YP_005779836.1 385218361 12359907 complement(101012..101542) 1 NC_017371.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; hypothetical protein 101542 12359907 HPGAM_00515 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779836.1 101012 R 907240 CDS YP_005779837.1 385218362 12359908 101615..102559 1 NC_017371.1 COG1052 Lactate dehydrogenase and related dehydrogenases; 2-hydroxyacid dehydrogenase 102559 12359908 HPGAM_00520 Helicobacter pylori Gambia94/24 2-hydroxyacid dehydrogenase YP_005779837.1 101615 D 907240 CDS YP_005779838.1 385218363 12359909 complement(102734..103447) 1 NC_017371.1 hypothetical protein 103447 12359909 HPGAM_00525 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779838.1 102734 R 907240 CDS YP_005779839.1 385218364 12359910 complement(103552..105012) 1 NC_017371.1 COG0498 Threonine synthase; threonine synthase 105012 12359910 HPGAM_00530 Helicobacter pylori Gambia94/24 threonine synthase YP_005779839.1 103552 R 907240 CDS YP_005779840.1 385218365 12359911 105222..107249 1 NC_017371.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein 107249 12359911 HPGAM_00535 Helicobacter pylori Gambia94/24 methyl-accepting chemotaxis protein YP_005779840.1 105222 D 907240 CDS YP_005779841.1 385218366 12359912 107249..108355 1 NC_017371.1 COG1636 Uncharacterized protein conserved in bacteria; hypothetical protein 108355 12359912 HPGAM_00540 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779841.1 107249 D 907240 CDS YP_005779842.1 385218367 12359913 108572..109333 1 NC_017371.1 hypothetical protein 109333 12359913 HPGAM_00545 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779842.1 108572 D 907240 CDS YP_005779843.1 385218368 12359914 complement(109305..110096) 1 NC_017371.1 COG0463 Glycosyltransferases involved in cell wall biogenesis; hypothetical protein 110096 12359914 HPGAM_00550 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779843.1 109305 R 907240 CDS YP_005779844.1 385218369 12359915 complement(110127..111782) 1 NC_017371.1 COG0840 Methyl-accepting chemotaxis protein; Methyl-accepting chemotaxis protein tlpB; putative signal peptide 111782 12359915 HPGAM_00555 Helicobacter pylori Gambia94/24 Methyl-accepting chemotaxis protein tlpB; putative signal peptide YP_005779844.1 110127 R 907240 CDS YP_005779845.1 385218370 12359916 complement(112037..113782) 1 NC_017371.1 COG0737 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 113782 12359916 HPGAM_00560 Helicobacter pylori Gambia94/24 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_005779845.1 112037 R 907240 CDS YP_005779846.1 385218371 12359917 complement(113926..114384) 1 NC_017371.1 COG1854 LuxS protein involved in autoinducer AI2 synthesis; S-ribosylhomocysteinase 114384 12359917 HPGAM_00565 Helicobacter pylori Gambia94/24 S-ribosylhomocysteinase YP_005779846.1 113926 R 907240 CDS YP_005779847.1 385218372 12359918 complement(114422..115564) 1 NC_017371.1 COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases; cystathionine gamma-synthase 115564 12359918 HPGAM_00570 Helicobacter pylori Gambia94/24 cystathionine gamma-synthase YP_005779847.1 114422 R 907240 CDS YP_005779848.1 385218373 12359919 complement(115585..116502) 1 NC_017371.1 COG0031 Cysteine synthase; cysteine synthase B 116502 12359919 HPGAM_00575 Helicobacter pylori Gambia94/24 cysteine synthase B YP_005779848.1 115585 R 907240 CDS YP_005779849.1 385218374 12359920 complement(117449..119311) 1 NC_017371.1 COG0443 Molecular chaperone; molecular chaperone DnaK 119311 dnaK 12359920 dnaK Helicobacter pylori Gambia94/24 molecular chaperone DnaK YP_005779849.1 117449 R 907240 CDS YP_005779850.1 385218375 12359921 complement(119342..119917) 1 NC_017371.1 COG0576 Molecular chaperone GrpE (heat shock protein); heat shock protein GrpE 119917 12359921 HPGAM_00595 Helicobacter pylori Gambia94/24 heat shock protein GrpE YP_005779850.1 119342 R 907240 CDS YP_005779851.1 385218376 12359922 complement(119917..120747) 1 NC_017371.1 COG1420 Transcriptional regulator of heat shock gene; heat-inducible transcription repressor 120747 12359922 HPGAM_00600 Helicobacter pylori Gambia94/24 heat-inducible transcription repressor YP_005779851.1 119917 R 907240 CDS YP_005779852.1 385218377 12359923 120957..121595 1 NC_017371.1 COG0235 Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases; hypothetical protein 121595 12359923 HPGAM_00605 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779852.1 120957 D 907240 CDS YP_005779853.1 385218378 12359924 121616..121912 1 NC_017371.1 hypothetical protein 121912 12359924 HPGAM_00610 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779853.1 121616 D 907240 CDS YP_005779854.1 385218379 12359925 complement(121940..123823) 1 NC_017371.1 COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein 123823 12359925 HPGAM_00615 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779854.1 121940 R 907240 CDS YP_005779855.1 385218380 12359926 complement(123871..125415) 1 NC_017371.1 COG1344 Flagellin and related hook-associated proteins; flagellin B 125415 12359926 HPGAM_00620 Helicobacter pylori Gambia94/24 flagellin B YP_005779855.1 123871 R 907240 CDS YP_005779856.1 385218381 12359927 125582..127789 1 NC_017371.1 COG0550 Topoisomerase IA; DNA topoisomerase I 127789 12359927 HPGAM_00625 Helicobacter pylori Gambia94/24 DNA topoisomerase I YP_005779856.1 125582 D 907240 CDS YP_005779857.1 385218382 12359928 127782..128708 1 NC_017371.1 COG0731 Fe-S oxidoreductases; hypothetical protein 128708 12359928 HPGAM_00630 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779857.1 127782 D 907240 CDS YP_005779858.1 385218383 12359929 complement(128852..130090) 1 NC_017371.1 hypothetical protein 130090 12359929 HPGAM_00635 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779858.1 128852 R 907240 CDS YP_005779859.1 385218384 12359930 complement(130186..132624) 1 NC_017371.1 COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; phosphoenolpyruvate synthase 132624 12359930 HPGAM_00640 Helicobacter pylori Gambia94/24 phosphoenolpyruvate synthase YP_005779859.1 130186 R 907240 CDS YP_005779860.1 385218385 12359931 132833..132946 1 NC_017371.1 hypothetical protein 132946 12359931 HPGAM_00645 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779860.1 132833 D 907240 CDS YP_005779861.1 385218386 12359932 132986..134824 1 NC_017371.1 COG0441 Threonyl-tRNA synthetase; threonyl-tRNA synthetase 134824 thrS 12359932 thrS Helicobacter pylori Gambia94/24 threonyl-tRNA synthetase YP_005779861.1 132986 D 907240 CDS YP_005779862.1 385218387 12359933 134821..135432 1 NC_017371.1 COG0290 Translation initiation factor 3 (IF-3); translation initiation factor IF-3 135432 infC 12359933 infC Helicobacter pylori Gambia94/24 translation initiation factor IF-3 YP_005779862.1 134821 D 907240 CDS YP_005779863.1 385218388 12359934 135413..135607 1 NC_017371.1 COG0291 Ribosomal protein L35; 50S ribosomal protein L35 135607 rpmI 12359934 rpmI Helicobacter pylori Gambia94/24 50S ribosomal protein L35 YP_005779863.1 135413 D 907240 CDS YP_005779864.1 385218389 12359935 135702..136052 1 NC_017371.1 COG0292 Ribosomal protein L20; 50S ribosomal protein L20 136052 rplT 12359935 rplT Helicobacter pylori Gambia94/24 50S ribosomal protein L20 YP_005779864.1 135702 D 907240 CDS YP_005779865.1 385218390 12359936 136251..137111 1 NC_017371.1 hypothetical protein 137111 12359936 HPGAM_00670 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779865.1 136251 D 907240 CDS YP_005779866.1 385218391 12359937 137602..138039 1 NC_017371.1 hypothetical protein 138039 12359937 HPGAM_00675 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779866.1 137602 D 907240 CDS YP_005779867.1 385218392 12359938 138444..139301 1 NC_017371.1 hypothetical protein 139301 12359938 HPGAM_00680 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779867.1 138444 D 907240 CDS YP_005779868.1 385218393 12359939 complement(139964..141331) 1 NC_017371.1 COG1760 L-serine deaminase; L-serine deaminase 141331 12359939 HPGAM_00685 Helicobacter pylori Gambia94/24 L-serine deaminase YP_005779868.1 139964 R 907240 CDS YP_005779869.1 385218394 12359940 complement(141331..142572) 1 NC_017371.1 COG0814 Amino acid permeases; L-serine transporter 142572 12359940 HPGAM_00690 Helicobacter pylori Gambia94/24 L-serine transporter YP_005779869.1 141331 R 907240 CDS YP_005779870.1 385218395 12359941 142754..144103 1 NC_017371.1 COG3200 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; phospho-2-dehydro-3-deoxyheptonate aldolase 144103 12359941 HPGAM_00695 Helicobacter pylori Gambia94/24 phospho-2-dehydro-3-deoxyheptonate aldolase YP_005779870.1 142754 D 907240 CDS YP_005779871.1 385218396 12359942 144392..144526 1 NC_017371.1 hypothetical protein 144526 12359942 HPGAM_00700 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779871.1 144392 D 907240 CDS YP_005779872.1 385218397 12359943 complement(144750..145208) 1 NC_017371.1 COG1225 Peroxiredoxin; bacterioferritin comigratory protein 145208 12359943 HPGAM_00705 Helicobacter pylori Gambia94/24 bacterioferritin comigratory protein YP_005779872.1 144750 R 907240 CDS YP_005779873.1 385218398 12359944 complement(145218..145853) 1 NC_017371.1 COG1556 Uncharacterized conserved protein; hypothetical protein 145853 12359944 HPGAM_00710 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779873.1 145218 R 907240 CDS YP_005779874.1 385218399 12359945 complement(145846..147291) 1 NC_017371.1 COG1139 Uncharacterized conserved protein containing a ferredoxin-like domain; iron-sulfur cluster binding protein 147291 12359945 HPGAM_00715 Helicobacter pylori Gambia94/24 iron-sulfur cluster binding protein YP_005779874.1 145846 R 907240 CDS YP_005779875.1 385218400 12359946 complement(147320..148048) 1 NC_017371.1 COG0247 Fe-S oxidoreductase; (S)-2-hydroxy-acid oxidase 148048 12359946 HPGAM_00720 Helicobacter pylori Gambia94/24 (S)-2-hydroxy-acid oxidase YP_005779875.1 147320 R 907240 CDS YP_005779876.1 385218401 12359947 148273..149922 1 NC_017371.1 COG1620 L-lactate permease; L-lactate permease 149922 12359947 HPGAM_00725 Helicobacter pylori Gambia94/24 L-lactate permease YP_005779876.1 148273 D 907240 CDS YP_005779877.1 385218402 12359948 149971..151626 1 NC_017371.1 COG1620 L-lactate permease; L-lactate permease 151626 12359948 HPGAM_00730 Helicobacter pylori Gambia94/24 L-lactate permease YP_005779877.1 149971 D 907240 CDS YP_005779878.1 385218403 12359949 complement(151650..152636) 1 NC_017371.1 COG1194 A/G-specific DNA glycosylase; DNA glycosylase MutY 152636 12359949 HPGAM_00735 Helicobacter pylori Gambia94/24 DNA glycosylase MutY YP_005779878.1 151650 R 907240 CDS YP_005779879.1 385218404 12359950 complement(152637..154085) 1 NC_017371.1 COG0471 Di- and tricarboxylate transporters; hypothetical protein 154085 12359950 HPGAM_00740 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779879.1 152637 R 907240 CDS YP_005779880.1 385218405 12359951 154255..155721 1 NC_017371.1 COG3278 Cbb3-type cytochrome oxidase, subunit 1; cbb3-type cytochrome c oxidase subunit I 155721 12359951 HPGAM_00745 Helicobacter pylori Gambia94/24 cbb3-type cytochrome c oxidase subunit I YP_005779880.1 154255 D 907240 CDS YP_005779881.1 385218406 12359952 155734..156432 1 NC_017371.1 COG2993 Cbb3-type cytochrome oxidase, cytochrome c subunit; cbb3-type cytochrome c oxidase subunit II 156432 12359952 HPGAM_00750 Helicobacter pylori Gambia94/24 cbb3-type cytochrome c oxidase subunit II YP_005779881.1 155734 D 907240 CDS YP_005779882.1 385218407 12359953 156443..156661 1 NC_017371.1 cytochrome c oxidase, cbb3-type, CcoQ subunit 156661 12359953 HPGAM_00755 Helicobacter pylori Gambia94/24 cytochrome c oxidase, cbb3-type, CcoQ subunit YP_005779882.1 156443 D 907240 CDS YP_005779883.1 385218408 12359954 156663..157541 1 NC_017371.1 COG2010 Cytochrome c, mono- and diheme variants; cytochrome c oxidase, cbb3-type subunit III 157541 12359954 HPGAM_00760 Helicobacter pylori Gambia94/24 cytochrome c oxidase, cbb3-type subunit III YP_005779883.1 156663 D 907240 CDS YP_005779884.1 385218409 12359955 157552..157758 1 NC_017371.1 hypothetical protein 157758 12359955 HPGAM_00765 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779884.1 157552 D 907240 CDS YP_005779885.1 385218410 12359956 157755..157862 1 NC_017371.1 hypothetical protein 157862 12359956 HPGAM_00770 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779885.1 157755 D 907240 CDS YP_005779886.1 385218411 12359957 157859..158452 1 NC_017371.1 COG0443 Molecular chaperone; hypothetical protein 158452 12359957 HPGAM_00775 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779886.1 157859 D 907240 CDS YP_005779887.1 385218412 12359958 158465..159046 1 NC_017371.1 hypothetical protein 159046 12359958 HPGAM_00780 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779887.1 158465 D 907240 CDS YP_005779888.1 385218413 12359959 complement(159801..159959) 1 NC_017371.1 hypothetical protein 159959 12359959 HPGAM_00785 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779888.1 159801 R 907240 CDS YP_005779889.1 385218414 12359960 complement(160422..161285) 1 NC_017371.1 COG2107 Predicted periplasmic solute-binding protein; hypothetical protein 161285 12359960 HPGAM_00790 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779889.1 160422 R 907240 CDS YP_005779890.1 385218415 12359961 161384..162427 1 NC_017371.1 COG0468 RecA/RadA recombinase; recombinase A 162427 recA 12359961 recA Helicobacter pylori Gambia94/24 recombinase A YP_005779890.1 161384 D 907240 CDS YP_005779891.1 385218416 12359962 162439..163719 1 NC_017371.1 COG0148 Enolase; enolase 163719 eno 12359962 eno Helicobacter pylori Gambia94/24 enolase YP_005779891.1 162439 D 907240 CDS YP_005779892.1 385218417 12359963 163712..163987 1 NC_017371.1 hypothetical protein 163987 12359963 HPGAM_00805 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779892.1 163712 D 907240 CDS YP_005779893.1 385218418 12359964 164004..164600 1 NC_017371.1 hypothetical protein 164600 12359964 HPGAM_00810 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779893.1 164004 D 907240 CDS YP_005779894.1 385218419 12359965 164605..165093 1 NC_017371.1 COG0703 Shikimate kinase; shikimate kinase 165093 aroK 12359965 aroK Helicobacter pylori Gambia94/24 shikimate kinase YP_005779894.1 164605 D 907240 CDS YP_005779895.1 385218420 12359966 165115..166071 1 NC_017371.1 hypothetical protein 166071 12359966 HPGAM_00820 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779895.1 165115 D 907240 CDS YP_005779896.1 385218421 12359967 complement(166068..167204) 1 NC_017371.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein 167204 12359967 HPGAM_00825 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005779896.1 166068 R 907240 CDS YP_005779897.1 385218422 12359968 167357..168274 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 168274 12359968 HPGAM_00830 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779897.1 167357 D 907240 CDS YP_005779898.1 385218423 12359969 complement(168957..169679) 1 NC_017371.1 COG0217 Uncharacterized conserved protein; hypothetical protein 169679 12359969 HPGAM_00835 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779898.1 168957 R 907240 CDS YP_005779899.1 385218424 12359970 complement(169680..170651) 1 NC_017371.1 COG0113 Delta-aminolevulinic acid dehydratase; delta-aminolevulinic acid dehydratase 170651 12359970 HPGAM_00840 Helicobacter pylori Gambia94/24 delta-aminolevulinic acid dehydratase YP_005779899.1 169680 R 907240 CDS YP_005779900.1 385218425 12359971 complement(170722..172005) 1 NC_017371.1 COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein 172005 12359971 HPGAM_00845 Helicobacter pylori Gambia94/24 putative histidine kinase sensor protein YP_005779900.1 170722 R 907240 CDS YP_005779901.1 385218426 12359972 complement(172029..172706) 1 NC_017371.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 172706 12359972 HPGAM_00850 Helicobacter pylori Gambia94/24 transcriptional regulator YP_005779901.1 172029 R 907240 CDS YP_005779902.1 385218427 12359973 172906..173031 1 NC_017371.1 hypothetical protein 173031 12359973 HPGAM_00855 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779902.1 172906 D 907240 CDS YP_005779903.1 385218428 12359974 complement(173114..173590) 1 NC_017371.1 hypothetical protein 173590 12359974 HPGAM_00860 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779903.1 173114 R 907240 CDS YP_005779904.1 385218429 12359975 complement(173581..173844) 1 NC_017371.1 COG0457 FOG: TPR repeat; hypothetical protein 173844 12359975 HPGAM_00865 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779904.1 173581 R 907240 CDS YP_005779905.1 385218430 12359976 complement(173878..175158) 1 NC_017371.1 COG0826 Collagenase and related proteases; collagenase 175158 12359976 HPGAM_00870 Helicobacter pylori Gambia94/24 collagenase YP_005779905.1 173878 R 907240 CDS YP_005779906.1 385218431 12359977 complement(175161..175892) 1 NC_017371.1 hypothetical protein 175892 12359977 HPGAM_00875 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779906.1 175161 R 907240 CDS YP_005779907.1 385218432 12359978 complement(175962..177053) 1 NC_017371.1 COG1186 Protein chain release factor B; peptide chain release factor 2 177053 prfB 12359978 prfB Helicobacter pylori Gambia94/24 peptide chain release factor 2 YP_005779907.1 175962 R 907240 CDS YP_005779908.1 385218433 12359979 complement(177114..178289) 1 NC_017371.1 COG0303 Molybdopterin biosynthesis enzyme; molybdopterin biosynthesis protein 178289 12359979 HPGAM_00885 Helicobacter pylori Gambia94/24 molybdopterin biosynthesis protein YP_005779908.1 177114 R 907240 CDS YP_005779909.1 385218434 12359980 complement(178299..179066) 1 NC_017371.1 COG1684 Flagellar biosynthesis pathway, component FliR; flagellar biosynthesis protein FliR 179066 fliR 12359980 fliR Helicobacter pylori Gambia94/24 flagellar biosynthesis protein FliR YP_005779909.1 178299 R 907240 CDS YP_005779910.1 385218435 12359981 complement(179104..179787) 1 NC_017371.1 hypothetical protein 179787 12359981 HPGAM_00895 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779910.1 179104 R 907240 CDS YP_005779911.1 385218436 12359982 complement(179890..180108) 1 NC_017371.1 hypothetical protein 180108 12359982 HPGAM_00900 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779911.1 179890 R 907240 CDS YP_005779912.1 385218437 12359983 180256..181155 1 NC_017371.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; putative peptidyl-prolyl cis-trans isomerase 181155 12359983 HPGAM_00905 Helicobacter pylori Gambia94/24 putative peptidyl-prolyl cis-trans isomerase YP_005779912.1 180256 D 907240 CDS YP_005779913.1 385218438 12359984 181172..182095 1 NC_017371.1 COG0191 Fructose/tagatose bisphosphate aldolase; fructose-bisphosphate aldolase 182095 12359984 HPGAM_00910 Helicobacter pylori Gambia94/24 fructose-bisphosphate aldolase YP_005779913.1 181172 D 907240 CDS YP_005779914.1 385218439 12359985 182117..182680 1 NC_017371.1 COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); elongation factor P 182680 12359985 HPGAM_00915 Helicobacter pylori Gambia94/24 elongation factor P YP_005779914.1 182117 D 907240 CDS YP_005779915.1 385218440 12359986 complement(183418..184440) 1 NC_017371.1 COG2089 Sialic acid synthase; sialic acid synthase 184440 12359986 HPGAM_00920 Helicobacter pylori Gambia94/24 sialic acid synthase YP_005779915.1 183418 R 907240 CDS YP_005779916.1 385218441 12359987 complement(184443..185084) 1 NC_017371.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein 185084 12359987 HPGAM_00925 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005779916.1 184443 R 907240 CDS YP_005779917.1 385218442 12359988 complement(185084..186358) 1 NC_017371.1 COG0815 Apolipoprotein N-acyltransferase; apolipoprotein N-acyltransferase 186358 12359988 HPGAM_00930 Helicobacter pylori Gambia94/24 apolipoprotein N-acyltransferase YP_005779917.1 185084 R 907240 CDS YP_005779918.1 385218443 12359989 186594..187304 1 NC_017371.1 COG1286 Uncharacterized membrane protein, required for colicin V production; hypothetical protein 187304 12359989 HPGAM_00935 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779918.1 186594 D 907240 CDS YP_005779919.1 385218444 12359990 187314..188819 1 NC_017371.1 COG1190 Lysyl-tRNA synthetase (class II); lysyl-tRNA synthetase 188819 lysS 12359990 lysS Helicobacter pylori Gambia94/24 lysyl-tRNA synthetase YP_005779919.1 187314 D 907240 CDS YP_005779920.1 385218445 12359991 188819..190069 1 NC_017371.1 COG0112 Glycine/serine hydroxymethyltransferase; serine hydroxymethyltransferase 190069 12359991 HPGAM_00945 Helicobacter pylori Gambia94/24 serine hydroxymethyltransferase YP_005779920.1 188819 D 907240 CDS YP_005779921.1 385218446 12359992 190079..190621 1 NC_017371.1 hypothetical protein 190621 12359992 HPGAM_00950 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779921.1 190079 D 907240 CDS YP_005779922.1 385218447 12359993 190643..191452 1 NC_017371.1 hypothetical protein 191452 12359993 HPGAM_00955 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779922.1 190643 D 907240 CDS YP_005779923.1 385218448 12359994 complement(191847..193460) 1 NC_017371.1 COG1479 Uncharacterized conserved protein; hypothetical protein 193460 12359994 HPGAM_00960 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779923.1 191847 R 907240 CDS YP_005779924.1 385218449 12359995 193706..194239 1 NC_017371.1 COG2862 Predicted membrane protein; hypothetical protein 194239 12359995 HPGAM_00965 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779924.1 193706 D 907240 CDS YP_005779925.1 385218450 12359996 complement(194246..195754) 1 NC_017371.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; putative cardiolipin synthase 195754 12359996 HPGAM_00970 Helicobacter pylori Gambia94/24 putative cardiolipin synthase YP_005779925.1 194246 R 907240 CDS YP_005779926.1 385218451 12359997 complement(195776..196513) 1 NC_017371.1 COG0479 Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit; fumarate reductase iron-sulfur subunit 196513 frdB 12359997 frdB Helicobacter pylori Gambia94/24 fumarate reductase iron-sulfur subunit YP_005779926.1 195776 R 907240 CDS YP_005779927.1 385218452 12359998 complement(196506..198650) 1 NC_017371.1 COG1053 Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; fumarate reductase flavoprotein subunit 198650 12359998 HPGAM_00980 Helicobacter pylori Gambia94/24 fumarate reductase flavoprotein subunit YP_005779927.1 196506 R 907240 CDS YP_005779928.1 385218453 12359999 complement(198660..199427) 1 NC_017371.1 COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit; fumarate reductase cytochrome b-556 subunit 199427 12359999 HPGAM_00985 Helicobacter pylori Gambia94/24 fumarate reductase cytochrome b-556 subunit YP_005779928.1 198660 R 907240 CDS YP_005779929.1 385218454 12360000 199635..200339 1 NC_017371.1 COG0149 Triosephosphate isomerase; triosephosphate isomerase 200339 tpiA 12360000 tpiA Helicobacter pylori Gambia94/24 triosephosphate isomerase YP_005779929.1 199635 D 907240 CDS YP_005779930.1 385218455 12360001 200349..201182 1 NC_017371.1 COG0623 Enoyl-[acyl-carrier-protein] reductase (NADH); enoyl-ACP reductase 201182 12360001 HPGAM_00995 Helicobacter pylori Gambia94/24 enoyl-ACP reductase YP_005779930.1 200349 D 907240 CDS YP_005779931.1 385218456 12360002 201182..202192 1 NC_017371.1 COG1044 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 202192 lpxD 12360002 lpxD Helicobacter pylori Gambia94/24 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005779931.1 201182 D 907240 CDS YP_005779932.1 385218457 12360003 complement(202652..203560) 1 NC_017371.1 hypothetical protein 203560 12360003 HPGAM_01005 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779932.1 202652 R 907240 CDS YP_005779933.1 385218458 12360004 complement(203560..204405) 1 NC_017371.1 hypothetical protein 204405 12360004 HPGAM_01010 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779933.1 203560 R 907240 CDS YP_005779934.1 385218459 12360005 complement(204422..205303) 1 NC_017371.1 hypothetical protein 205303 12360005 HPGAM_01015 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779934.1 204422 R 907240 CDS YP_005779935.1 385218460 12360006 complement(205356..205682) 1 NC_017371.1 hypothetical protein 205682 12360006 HPGAM_01020 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779935.1 205356 R 907240 CDS YP_005779936.1 385218461 12360007 complement(205686..206255) 1 NC_017371.1 hypothetical protein 206255 12360007 HPGAM_01025 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779936.1 205686 R 907240 CDS YP_005779937.1 385218462 12360008 complement(206255..207052) 1 NC_017371.1 hypothetical protein 207052 12360008 HPGAM_01030 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779937.1 206255 R 907240 CDS YP_005779938.1 385218463 12360009 complement(207054..207599) 1 NC_017371.1 hypothetical protein 207599 12360009 HPGAM_01035 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779938.1 207054 R 907240 CDS YP_005779939.1 385218464 12360010 complement(207646..207870) 1 NC_017371.1 hypothetical protein 207870 12360010 HPGAM_01040 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779939.1 207646 R 907240 CDS YP_005779940.1 385218465 12360011 complement(207867..208862) 1 NC_017371.1 hypothetical protein 208862 12360011 HPGAM_01045 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779940.1 207867 R 907240 CDS YP_005779941.1 385218466 12360012 complement(208866..209189) 1 NC_017371.1 hypothetical protein 209189 12360012 HPGAM_01050 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779941.1 208866 R 907240 CDS YP_005779942.1 385218467 12360013 complement(209189..209422) 1 NC_017371.1 hypothetical protein 209422 12360013 HPGAM_01055 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779942.1 209189 R 907240 CDS YP_005779943.1 385218468 12360014 complement(209434..209655) 1 NC_017371.1 hypothetical protein 209655 12360014 HPGAM_01060 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779943.1 209434 R 907240 CDS YP_005779944.1 385218469 12360015 complement(209721..211277) 1 NC_017371.1 COG5410 Uncharacterized protein conserved in bacteria; phage-related CUP0950-like protein 211277 12360015 HPGAM_01065 Helicobacter pylori Gambia94/24 phage-related CUP0950-like protein YP_005779944.1 209721 R 907240 CDS YP_005779945.1 385218470 12360016 complement(211270..211380) 1 NC_017371.1 hypothetical protein 211380 12360016 HPGAM_01070 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779945.1 211270 R 907240 CDS YP_005779946.1 385218471 12360017 complement(211392..213203) 1 NC_017371.1 hypothetical protein 213203 12360017 HPGAM_01075 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779946.1 211392 R 907240 CDS YP_005779947.1 385218472 12360018 complement(213249..213692) 1 NC_017371.1 hypothetical protein 213692 12360018 HPGAM_01080 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779947.1 213249 R 907240 CDS YP_005779948.1 385218473 12360019 complement(213791..214147) 1 NC_017371.1 hypothetical protein 214147 12360019 HPGAM_01085 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779948.1 213791 R 907240 CDS YP_005779949.1 385218474 12360020 complement(214164..215303) 1 NC_017371.1 hypothetical protein 215303 12360020 HPGAM_01090 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779949.1 214164 R 907240 CDS YP_005779950.1 385218475 12360021 complement(215313..215864) 1 NC_017371.1 hypothetical protein 215864 12360021 HPGAM_01095 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779950.1 215313 R 907240 CDS YP_005779951.1 385218476 12360022 complement(216107..216694) 1 NC_017371.1 hypothetical protein 216694 12360022 HPGAM_01100 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779951.1 216107 R 907240 CDS YP_005779952.1 385218477 12360023 complement(216691..217092) 1 NC_017371.1 hypothetical protein 217092 12360023 HPGAM_01105 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779952.1 216691 R 907240 CDS YP_005779953.1 385218478 12360024 complement(217092..217487) 1 NC_017371.1 hypothetical protein 217487 12360024 HPGAM_01110 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779953.1 217092 R 907240 CDS YP_005779954.1 385218479 12360025 complement(217484..217936) 1 NC_017371.1 hypothetical protein 217936 12360025 HPGAM_01115 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779954.1 217484 R 907240 CDS YP_005779955.1 385218480 12360026 complement(217969..218292) 1 NC_017371.1 hypothetical protein 218292 12360026 HPGAM_01120 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779955.1 217969 R 907240 CDS YP_005779956.1 385218481 12360027 218292..219449 1 NC_017371.1 COG0192 S-adenosylmethionine synthetase; S-adenosylmethionine synthetase 219449 12360027 HPGAM_01125 Helicobacter pylori Gambia94/24 S-adenosylmethionine synthetase YP_005779956.1 218292 D 907240 CDS YP_005779957.1 385218482 12360028 219515..219928 1 NC_017371.1 COG0105 Nucleoside diphosphate kinase; mulitfunctional nucleoside diphosphate kinase 219928 ndk 12360028 ndk Helicobacter pylori Gambia94/24 mulitfunctional nucleoside diphosphate kinase YP_005779957.1 219515 D 907240 CDS YP_005779958.1 385218483 12360029 219953..220309 1 NC_017371.1 hypothetical protein 220309 12360029 HPGAM_01135 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779958.1 219953 D 907240 CDS YP_005779959.1 385218484 12360030 220325..220471 1 NC_017371.1 COG0333 Ribosomal protein L32; 50S ribosomal protein L32 220471 rpmF 12360030 rpmF Helicobacter pylori Gambia94/24 50S ribosomal protein L32 YP_005779959.1 220325 D 907240 CDS YP_005779960.1 385218485 12360031 220549..221568 1 NC_017371.1 COG0416 Fatty acid/phospholipid biosynthesis enzyme; putative phosphate acyltransferase 221568 12360031 HPGAM_01145 Helicobacter pylori Gambia94/24 putative phosphate acyltransferase YP_005779960.1 220549 D 907240 CDS YP_005779961.1 385218486 12360032 221592..222587 1 NC_017371.1 COG0332 3-oxoacyl-[acyl-carrier-protein] synthase III; 3-oxoacyl-ACP synthase 222587 12360032 HPGAM_01150 Helicobacter pylori Gambia94/24 3-oxoacyl-ACP synthase YP_005779961.1 221592 D 907240 CDS YP_005779962.1 385218487 12360033 222630..222932 1 NC_017371.1 hypothetical protein 222932 12360033 HPGAM_01155 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779962.1 222630 D 907240 CDS YP_005779963.1 385218488 12360034 222996..223172 1 NC_017371.1 hypothetical protein 223172 12360034 HPGAM_01160 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779963.1 222996 D 907240 CDS YP_005779964.1 385218489 12360035 complement(223613..223996) 1 NC_017371.1 hypothetical protein 223996 12360035 HPGAM_01165 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779964.1 223613 R 907240 CDS YP_005779965.1 385218490 12360036 complement(224007..227207) 1 NC_017371.1 COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog; hypothetical protein 227207 12360036 HPGAM_01170 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779965.1 224007 R 907240 CDS YP_005779966.1 385218491 12360037 227304..228410 1 NC_017371.1 COG0489 ATPases involved in chromosome partitioning; hypothetical protein 228410 12360037 HPGAM_01175 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779966.1 227304 D 907240 CDS YP_005779967.1 385218492 12360038 complement(228470..229525) 1 NC_017371.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein 229525 12360038 HPGAM_01180 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005779967.1 228470 R 907240 CDS YP_005779968.1 385218493 12360039 complement(229549..229668) 1 NC_017371.1 putative lipopolysaccharide biosynthesis protein 229668 12360039 HPGAM_01185 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005779968.1 229549 R 907240 CDS YP_005779969.1 385218494 12360040 229821..231173 1 NC_017371.1 hypothetical protein 231173 12360040 HPGAM_01190 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779969.1 229821 D 907240 CDS YP_005779970.1 385218495 12360041 complement(231170..231295) 1 NC_017371.1 hypothetical protein 231295 12360041 HPGAM_01195 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779970.1 231170 R 907240 CDS YP_005779971.1 385218496 12360042 231276..233141 1 NC_017371.1 COG0326 Molecular chaperone, HSP90 family; heat shock protein 90 233141 12360042 HPGAM_01200 Helicobacter pylori Gambia94/24 heat shock protein 90 YP_005779971.1 231276 D 907240 CDS YP_005779972.1 385218497 12360043 complement(233309..234061) 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 234061 12360043 HPGAM_01205 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779972.1 233309 R 907240 CDS YP_005779973.1 385218498 12360044 complement(234508..235674) 1 NC_017371.1 COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases; succinyl-diaminopimelate desuccinylase 235674 12360044 HPGAM_01210 Helicobacter pylori Gambia94/24 succinyl-diaminopimelate desuccinylase YP_005779973.1 234508 R 907240 CDS YP_005779974.1 385218499 12360045 complement(235684..237549) 1 NC_017371.1 COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 237549 12360045 HPGAM_01215 Helicobacter pylori Gambia94/24 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_005779974.1 235684 R 907240 CDS YP_005779975.1 385218500 12360046 237645..239291 1 NC_017371.1 COG0471 Di- and tricarboxylate transporters; sodium-dependent transporter 239291 12360046 HPGAM_01220 Helicobacter pylori Gambia94/24 sodium-dependent transporter YP_005779975.1 237645 D 907240 CDS YP_005779976.1 385218501 12360047 239304..240104 1 NC_017371.1 COG0575 CDP-diglyceride synthetase; phosphatidate cytidylyltransferase 240104 12360047 HPGAM_01225 Helicobacter pylori Gambia94/24 phosphatidate cytidylyltransferase YP_005779976.1 239304 D 907240 CDS YP_005779977.1 385218502 12360048 240105..241211 1 NC_017371.1 COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 241211 12360048 HPGAM_01230 Helicobacter pylori Gambia94/24 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005779977.1 240105 D 907240 CDS YP_005779978.1 385218503 12360049 complement(242479..243030) 1 NC_017371.1 COG1881 Phospholipid-binding protein; hypothetical protein 243030 12360049 HPGAM_01245 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779978.1 242479 R 907240 CDS YP_005779979.1 385218504 12360050 243171..243635 1 NC_017371.1 hypothetical protein 243635 12360050 HPGAM_01250 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779979.1 243171 D 907240 CDS YP_005779980.1 385218505 12360051 243804..244967 1 NC_017371.1 COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes; cysteine desulfurase 244967 12360051 HPGAM_01255 Helicobacter pylori Gambia94/24 cysteine desulfurase YP_005779980.1 243804 D 907240 CDS YP_005779981.1 385218506 12360052 244989..245969 1 NC_017371.1 COG0822 NifU homolog involved in Fe-S cluster formation; nifU-like protein 245969 12360052 HPGAM_01260 Helicobacter pylori Gambia94/24 nifU-like protein YP_005779981.1 244989 D 907240 CDS YP_005779982.1 385218507 12360053 246129..246365 1 NC_017371.1 hypothetical protein 246365 12360053 HPGAM_01265 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779982.1 246129 D 907240 CDS YP_005779983.1 385218508 12360054 246476..247822 1 NC_017371.1 COG1066 Predicted ATP-dependent serine protease; DNA repair protein RadA 247822 12360054 HPGAM_01270 Helicobacter pylori Gambia94/24 DNA repair protein RadA YP_005779983.1 246476 D 907240 CDS YP_005779984.1 385218509 12360055 247943..249022 1 NC_017371.1 COG0225 Peptide methionine sulfoxide reductase; bifunctional methionine sulfoxide reductase A/B 249022 12360055 HPGAM_01275 Helicobacter pylori Gambia94/24 bifunctional methionine sulfoxide reductase A/B YP_005779984.1 247943 D 907240 CDS YP_005779985.1 385218510 12360056 complement(249192..249308) 1 NC_017371.1 hypothetical protein 249308 12360056 HPGAM_01280 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779985.1 249192 R 907240 CDS YP_005779986.1 385218511 12360057 complement(249428..250261) 1 NC_017371.1 COG0730 Predicted permeases; hypothetical protein 250261 12360057 HPGAM_01285 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779986.1 249428 R 907240 CDS YP_005779987.1 385218512 12360058 250384..250476 1 NC_017371.1 hypothetical protein 250476 12360058 HPGAM_01290 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779987.1 250384 D 907240 CDS YP_005779988.1 385218513 12360059 complement(250473..252554) 1 NC_017371.1 outer membrane protein 252554 12360059 HPGAM_01295 Helicobacter pylori Gambia94/24 outer membrane protein YP_005779988.1 250473 R 907240 CDS YP_005779989.1 385218514 12360060 252818..253975 1 NC_017371.1 COG0659 Sulfate permease and related transporters (MFS superfamily); hypothetical protein 253975 12360060 HPGAM_01300 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779989.1 252818 D 907240 CDS YP_005779990.1 385218515 12360062 complement(254219..255670) 1 NC_017371.1 Outer membrane protein/porin 255670 12360062 HPGAM_01305 Helicobacter pylori Gambia94/24 Outer membrane protein/porin YP_005779990.1 254219 R 907240 CDS YP_005779991.1 385218516 12360063 complement(255862..256593) 1 NC_017371.1 COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; 3-deoxy-manno-octulosonate cytidylyltransferase 256593 12360063 HPGAM_01310 Helicobacter pylori Gambia94/24 3-deoxy-manno-octulosonate cytidylyltransferase YP_005779991.1 255862 R 907240 CDS YP_005779992.1 385218517 12360064 256710..257507 1 NC_017371.1 COG1651 Protein-disulfide isomerase; hypothetical protein 257507 12360064 HPGAM_01315 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779992.1 256710 D 907240 CDS YP_005779993.1 385218518 12360065 257521..258171 1 NC_017371.1 hypothetical protein 258171 12360065 HPGAM_01320 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779993.1 257521 D 907240 CDS YP_005779994.1 385218519 12360066 258197..259369 1 NC_017371.1 COG0754 Glutathionylspermidine synthase; hypothetical protein 259369 12360066 HPGAM_01325 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779994.1 258197 D 907240 CDS YP_005779995.1 385218520 12360067 259369..259899 1 NC_017371.1 hypothetical protein 259899 12360067 HPGAM_01330 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779995.1 259369 D 907240 CDS YP_005779996.1 385218521 12360068 complement(259884..260012) 1 NC_017371.1 hypothetical protein 260012 12360068 HPGAM_01335 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779996.1 259884 R 907240 CDS YP_005779997.1 385218522 12360069 complement(260521..260685) 1 NC_017371.1 hypothetical protein 260685 12360069 HPGAM_01340 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779997.1 260521 R 907240 CDS YP_005779998.1 385218523 12360070 complement(260682..261749) 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 261749 12360070 HPGAM_01345 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779998.1 260682 R 907240 CDS YP_005779999.1 385218524 12360071 complement(261859..262224) 1 NC_017371.1 hypothetical protein 262224 12360071 HPGAM_01350 Helicobacter pylori Gambia94/24 hypothetical protein YP_005779999.1 261859 R 907240 CDS YP_005780000.1 385218525 12360072 complement(262224..263144) 1 NC_017371.1 COG0181 Porphobilinogen deaminase; porphobilinogen deaminase 263144 hemC 12360072 hemC Helicobacter pylori Gambia94/24 porphobilinogen deaminase YP_005780000.1 262224 R 907240 CDS YP_005780001.1 385218526 12360073 complement(263155..264888) 1 NC_017371.1 COG0442 Prolyl-tRNA synthetase; prolyl-tRNA synthetase 264888 12360073 HPGAM_01360 Helicobacter pylori Gambia94/24 prolyl-tRNA synthetase YP_005780001.1 263155 R 907240 CDS YP_005780002.1 385218527 12360074 complement(264892..266241) 1 NC_017371.1 COG0373 Glutamyl-tRNA reductase; glutamyl-tRNA reductase 266241 hemA 12360074 hemA Helicobacter pylori Gambia94/24 glutamyl-tRNA reductase YP_005780002.1 264892 R 907240 CDS YP_005780003.1 385218528 12360075 complement(266241..267164) 1 NC_017371.1 COG0142 Geranylgeranyl pyrophosphate synthase; putative octaprenyl-diphosphate synthase 267164 12360075 HPGAM_01370 Helicobacter pylori Gambia94/24 putative octaprenyl-diphosphate synthase YP_005780003.1 266241 R 907240 CDS YP_005780004.1 385218529 12360076 complement(267174..267569) 1 NC_017371.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; hypothetical protein 267569 12360076 HPGAM_01375 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780004.1 267174 R 907240 CDS YP_005780005.1 385218530 12360077 complement(267562..267846) 1 NC_017371.1 hypothetical protein 267846 12360077 HPGAM_01380 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780005.1 267562 R 907240 CDS YP_005780006.1 385218531 12360078 complement(267867..268301) 1 NC_017371.1 COG0783 DNA-binding ferritin-like protein (oxidative damage protectant); neutrophil activating protein 268301 12360078 HPGAM_01385 Helicobacter pylori Gambia94/24 neutrophil activating protein YP_005780006.1 267867 R 907240 CDS YP_005780007.1 385218532 12360079 complement(268508..269668) 1 NC_017371.1 COG0642 Signal transduction histidine kinase; putative histidine kinase sensor protein 269668 12360079 HPGAM_01390 Helicobacter pylori Gambia94/24 putative histidine kinase sensor protein YP_005780007.1 268508 R 907240 CDS YP_005780008.1 385218533 12360080 complement(269665..269982) 1 NC_017371.1 hypothetical protein 269982 12360080 HPGAM_01395 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780008.1 269665 R 907240 CDS YP_005780009.1 385218534 12360081 complement(269979..271007) 1 NC_017371.1 COG1706 Flagellar basal-body P-ring protein; flagellar basal body P-ring protein 271007 flgI 12360081 flgI Helicobacter pylori Gambia94/24 flagellar basal body P-ring protein YP_005780009.1 269979 R 907240 CDS YP_005780010.1 385218535 12360082 271192..272667 1 NC_017371.1 COG0513 Superfamily II DNA and RNA helicases; ATP-dependent RNA helicase DeaD 272667 12360082 HPGAM_01405 Helicobacter pylori Gambia94/24 ATP-dependent RNA helicase DeaD YP_005780010.1 271192 D 907240 CDS YP_005780011.1 385218536 12360083 272688..273776 1 NC_017371.1 COG0330 Membrane protease subunits, stomatin/prohibitin homologs; hypothetical protein 273776 12360083 HPGAM_01410 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780011.1 272688 D 907240 CDS YP_005780012.1 385218537 12360084 273783..274322 1 NC_017371.1 hypothetical protein 274322 12360084 HPGAM_01415 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780012.1 273783 D 907240 CDS YP_005780013.1 385218538 12360085 complement(274405..275955) 1 NC_017371.1 COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; ABC transporter ATP-binding protein 275955 12360085 HPGAM_01420 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780013.1 274405 R 907240 CDS YP_005780014.1 385218539 12360086 complement(275965..276987) 1 NC_017371.1 COG4239 ABC-type uncharacterized transport system, permease component; oligopeptide permease integral membrane protein 276987 12360086 HPGAM_01425 Helicobacter pylori Gambia94/24 oligopeptide permease integral membrane protein YP_005780014.1 275965 R 907240 CDS YP_005780015.1 385218540 12360088 277259..277351 1 NC_017371.1 hypothetical protein 277351 12360088 HPGAM_01430 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780015.1 277259 D 907240 CDS YP_005780016.1 385218541 12360089 277332..278768 1 NC_017371.1 Outer membrane protein HopF; putative signal peptide 278768 12360089 HPGAM_01435 Helicobacter pylori Gambia94/24 Outer membrane protein HopF; putative signal peptide YP_005780016.1 277332 D 907240 CDS YP_005780017.1 385218542 12360090 278781..280193 1 NC_017371.1 COG1066 Predicted ATP-dependent serine protease; Outer membrane protein HopG; putative signal peptide 280193 12360090 HPGAM_01440 Helicobacter pylori Gambia94/24 Outer membrane protein HopG; putative signal peptide YP_005780017.1 278781 D 907240 CDS YP_005780018.1 385218543 12360091 280294..281529 1 NC_017371.1 COG0104 Adenylosuccinate synthase; adenylosuccinate synthetase 281529 12360091 HPGAM_01445 Helicobacter pylori Gambia94/24 adenylosuccinate synthetase YP_005780018.1 280294 D 907240 CDS YP_005780019.1 385218544 12360092 281526..281954 1 NC_017371.1 hypothetical protein 281954 12360092 HPGAM_01450 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780019.1 281526 D 907240 CDS YP_005780020.1 385218545 12360093 281947..282705 1 NC_017371.1 COG3334 Uncharacterized conserved protein; hypothetical protein 282705 12360093 HPGAM_01455 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780020.1 281947 D 907240 CDS YP_005780021.1 385218546 12360094 282702..283757 1 NC_017371.1 COG0750 Predicted membrane-associated Zn-dependent proteases 1; hypothetical protein 283757 12360094 HPGAM_01460 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780021.1 282702 D 907240 CDS YP_005780022.1 385218547 12360095 283770..285032 1 NC_017371.1 COG1570 Exonuclease VII, large subunit; exodeoxyribonuclease VII large subunit 285032 xseA 12360095 xseA Helicobacter pylori Gambia94/24 exodeoxyribonuclease VII large subunit YP_005780022.1 283770 D 907240 CDS YP_005780023.1 385218548 12360096 complement(285051..286223) 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; type II DNA modification enzyme (methyltransferase) 286223 12360096 HPGAM_01470 Helicobacter pylori Gambia94/24 type II DNA modification enzyme (methyltransferase) YP_005780023.1 285051 R 907240 CDS YP_005780024.1 385218549 12360097 complement(286216..286830) 1 NC_017371.1 hypothetical protein 286830 12360097 HPGAM_01475 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780024.1 286216 R 907240 CDS YP_005780025.1 385218550 12360098 287631..288389 1 NC_017371.1 COG0863 DNA modification methylase; putative adenine-specific DNA-methyltransferase 288389 12360098 HPGAM_01490 Helicobacter pylori Gambia94/24 putative adenine-specific DNA-methyltransferase YP_005780025.1 287631 D 907240 CDS YP_005780026.1 385218551 12360099 288463..291033 1 NC_017371.1 COG0542 ATPases with chaperone activity, ATP-binding subunit; heat shock protein 291033 12360099 HPGAM_01495 Helicobacter pylori Gambia94/24 heat shock protein YP_005780026.1 288463 D 907240 CDS YP_005780027.1 385218552 12360100 291089..291808 1 NC_017371.1 COG0785 Cytochrome c biogenesis protein; cytochrome c biogenesis protein 291808 12360100 HPGAM_01500 Helicobacter pylori Gambia94/24 cytochrome c biogenesis protein YP_005780027.1 291089 D 907240 CDS YP_005780028.1 385218553 12360101 291818..292954 1 NC_017371.1 COG0044 Dihydroorotase and related cyclic amidohydrolases; dihydroorotase 292954 12360101 HPGAM_01505 Helicobacter pylori Gambia94/24 dihydroorotase YP_005780028.1 291818 D 907240 CDS YP_005780029.1 385218554 12360102 292939..294168 1 NC_017371.1 COG0402 Cytosine deaminase and related metal-dependent hydrolases; chlorohydrolase 294168 12360102 HPGAM_01510 Helicobacter pylori Gambia94/24 chlorohydrolase YP_005780029.1 292939 D 907240 CDS YP_005780030.1 385218555 12360103 294415..294657 1 NC_017371.1 hypothetical protein 294657 12360103 HPGAM_01515 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780030.1 294415 D 907240 CDS YP_005780031.1 385218556 12360104 294700..295980 1 NC_017371.1 COG0621 2-methylthioadenine synthetase; (dimethylallyl)adenosine tRNA methylthiotransferase 295980 12360104 HPGAM_01520 Helicobacter pylori Gambia94/24 (dimethylallyl)adenosine tRNA methylthiotransferase YP_005780031.1 294700 D 907240 CDS YP_005780032.1 385218557 12360105 296014..296667 1 NC_017371.1 COG2121 Uncharacterized protein conserved in bacteria; hypothetical protein 296667 12360105 HPGAM_01525 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780032.1 296014 D 907240 CDS YP_005780033.1 385218558 12360106 296660..297643 1 NC_017371.1 hypothetical protein 297643 12360106 HPGAM_01530 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780033.1 296660 D 907240 CDS YP_005780034.1 385218559 12360107 297633..298166 1 NC_017371.1 hypothetical protein 298166 12360107 HPGAM_01535 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780034.1 297633 D 907240 CDS YP_005780035.1 385218560 12360108 298258..298701 1 NC_017371.1 hypothetical protein 298701 12360108 HPGAM_01540 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780035.1 298258 D 907240 CDS YP_005780036.1 385218561 12360109 298718..299116 1 NC_017371.1 COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 299116 12360109 HPGAM_01545 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780036.1 298718 D 907240 CDS YP_005780037.1 385218562 12360110 299153..300448 1 NC_017371.1 COG0457 FOG: TPR repeat; hypothetical protein 300448 12360110 HPGAM_01550 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780037.1 299153 D 907240 CDS YP_005780038.1 385218563 12360111 300436..300993 1 NC_017371.1 hypothetical protein 300993 12360111 HPGAM_01555 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780038.1 300436 D 907240 CDS YP_005780039.1 385218564 12360112 301050..301304 1 NC_017371.1 COG1145 Ferredoxin; ferredoxin 301304 12360112 HPGAM_01560 Helicobacter pylori Gambia94/24 ferredoxin YP_005780039.1 301050 D 907240 CDS YP_005780040.1 385218565 12360113 301314..302768 1 NC_017371.1 COG0248 Exopolyphosphatase; guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase 302768 12360113 HPGAM_01565 Helicobacter pylori Gambia94/24 guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase YP_005780040.1 301314 D 907240 CDS YP_005780041.1 385218566 12360114 302765..303775 1 NC_017371.1 COG0859 ADP-heptose:LPS heptosyltransferase; lipopolysaccharide heptosyltransferase-1 303775 12360114 HPGAM_01570 Helicobacter pylori Gambia94/24 lipopolysaccharide heptosyltransferase-1 YP_005780041.1 302765 D 907240 CDS YP_005780042.1 385218567 12360115 303772..304758 1 NC_017371.1 COG1560 Lauroyl/myristoyl acyltransferase; lipid A biosynthesis lauroyl acyltransferase 304758 12360115 HPGAM_01575 Helicobacter pylori Gambia94/24 lipid A biosynthesis lauroyl acyltransferase YP_005780042.1 303772 D 907240 CDS YP_005780043.1 385218568 12360116 complement(304990..306105) 1 NC_017371.1 COG0343 Queuine/archaeosine tRNA-ribosyltransferase; queuine tRNA-ribosyltransferase 306105 tgt 12360116 tgt Helicobacter pylori Gambia94/24 queuine tRNA-ribosyltransferase YP_005780043.1 304990 R 907240 CDS YP_005780044.1 385218569 12360117 306162..307598 1 NC_017371.1 COG3400 Uncharacterized protein conserved in bacteria; hypothetical protein 307598 12360117 HPGAM_01585 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780044.1 306162 D 907240 CDS YP_005780045.1 385218570 12360118 307603..308634 1 NC_017371.1 COG0337 3-dehydroquinate synthetase; 3-dehydroquinate synthase 308634 aroB 12360118 aroB Helicobacter pylori Gambia94/24 3-dehydroquinate synthase YP_005780045.1 307603 D 907240 CDS YP_005780046.1 385218571 12360119 308625..310196 1 NC_017371.1 COG0668 Small-conductance mechanosensitive channel; hypothetical protein 310196 12360119 HPGAM_01595 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780046.1 308625 D 907240 CDS YP_005780047.1 385218572 12360120 310193..311449 1 NC_017371.1 COG0621 2-methylthioadenine synthetase; hypothetical protein 311449 12360120 HPGAM_01600 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780047.1 310193 D 907240 CDS YP_005780048.1 385218573 12360121 311436..313088 1 NC_017371.1 COG0465 ATP-dependent Zn proteases; ATP-dependent zinc metallopeptidase 313088 12360121 HPGAM_01605 Helicobacter pylori Gambia94/24 ATP-dependent zinc metallopeptidase YP_005780048.1 311436 D 907240 CDS YP_005780049.1 385218574 12360122 313091..313609 1 NC_017371.1 hypothetical protein 313609 12360122 HPGAM_01610 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780049.1 313091 D 907240 CDS YP_005780050.1 385218575 12360123 313622..314095 1 NC_017371.1 hypothetical protein 314095 12360123 HPGAM_01615 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780050.1 313622 D 907240 CDS YP_005780051.1 385218576 12360124 314163..322868 1 NC_017371.1 toxin-like outer membrane protein 322868 12360124 HPGAM_01620 Helicobacter pylori Gambia94/24 toxin-like outer membrane protein YP_005780051.1 314163 D 907240 CDS YP_005780052.1 385218577 12360125 322916..324133 1 NC_017371.1 COG0019 Diaminopimelate decarboxylase; diaminopimelate decarboxylase 324133 12360125 HPGAM_01625 Helicobacter pylori Gambia94/24 diaminopimelate decarboxylase YP_005780052.1 322916 D 907240 CDS YP_005780053.1 385218578 12360126 324138..324440 1 NC_017371.1 COG1605 Chorismate mutase; hypothetical protein 324440 12360126 HPGAM_01630 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780053.1 324138 D 907240 CDS YP_005780054.1 385218579 12360127 324453..325325 1 NC_017371.1 COG4866 Uncharacterized conserved protein; hypothetical protein 325325 12360127 HPGAM_01635 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780054.1 324453 D 907240 CDS YP_005780055.1 385218580 12360128 325326..327029 1 NC_017371.1 COG0147 Anthranilate/para-aminobenzoate synthases component I; para-aminobenzoate synthetase 327029 12360128 HPGAM_01640 Helicobacter pylori Gambia94/24 para-aminobenzoate synthetase YP_005780055.1 325326 D 907240 CDS YP_005780056.1 385218581 12360129 327157..328176 1 NC_017371.1 COG0388 Predicted amidohydrolase; acylamide amidohydrolase 328176 amiE 12360129 amiE Helicobacter pylori Gambia94/24 acylamide amidohydrolase YP_005780056.1 327157 D 907240 CDS YP_005780057.1 385218582 12360130 328346..328450 1 NC_017371.1 hypothetical protein 328450 12360130 HPGAM_01650 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780057.1 328346 D 907240 CDS YP_005780058.1 385218583 12360131 complement(328511..330997) 1 NC_017371.1 COG1344 Flagellin and related hook-associated proteins; flagellar hook-associated protein FlgL 330997 flgL 12360131 flgL Helicobacter pylori Gambia94/24 flagellar hook-associated protein FlgL YP_005780058.1 328511 R 907240 CDS YP_005780059.1 385218584 12360132 331239..331553 1 NC_017371.1 COG0261 Ribosomal protein L21; 50S ribosomal protein L21 331553 rplU 12360132 rplU Helicobacter pylori Gambia94/24 50S ribosomal protein L21 YP_005780059.1 331239 D 907240 CDS YP_005780060.1 385218585 12360133 331567..331833 1 NC_017371.1 COG0211 Ribosomal protein L27; 50S ribosomal protein L27 331833 rpmA 12360133 rpmA Helicobacter pylori Gambia94/24 50S ribosomal protein L27 YP_005780060.1 331567 D 907240 CDS YP_005780061.1 385218586 12360134 331991..333598 1 NC_017371.1 COG0747 ABC-type dipeptide transport system, periplasmic component; dipeptide ABC transporter periplasmic dipeptide-binding protein DppA 333598 12360134 HPGAM_01670 Helicobacter pylori Gambia94/24 dipeptide ABC transporter periplasmic dipeptide-binding protein DppA YP_005780061.1 331991 D 907240 CDS YP_005780062.1 385218587 12360135 333609..334613 1 NC_017371.1 COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide permease protein 334613 12360135 HPGAM_01675 Helicobacter pylori Gambia94/24 dipeptide permease protein YP_005780062.1 333609 D 907240 CDS YP_005780063.1 385218588 12360136 334613..335470 1 NC_017371.1 COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components; dipeptide permease protein 335470 12360136 HPGAM_01680 Helicobacter pylori Gambia94/24 dipeptide permease protein YP_005780063.1 334613 D 907240 CDS YP_005780064.1 385218589 12360137 335482..336345 1 NC_017371.1 COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; peptide ABC transporter ATP-binding protein 336345 12360137 HPGAM_01685 Helicobacter pylori Gambia94/24 peptide ABC transporter ATP-binding protein YP_005780064.1 335482 D 907240 CDS YP_005780065.1 385218590 12360138 336342..337148 1 NC_017371.1 COG4608 ABC-type oligopeptide transport system, ATPase component; dipeptide ABC transporter 337148 12360138 HPGAM_01690 Helicobacter pylori Gambia94/24 dipeptide ABC transporter YP_005780065.1 336342 D 907240 CDS YP_005780066.1 385218591 12360139 337168..338250 1 NC_017371.1 COG0536 Predicted GTPase; GTPase CgtA 338250 obgE 12360139 obgE Helicobacter pylori Gambia94/24 GTPase CgtA YP_005780066.1 337168 D 907240 CDS YP_005780067.1 385218592 12360140 338433..339428 1 NC_017371.1 hypothetical protein 339428 12360140 HPGAM_01700 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780067.1 338433 D 907240 CDS YP_005780068.1 385218593 12360141 339692..340246 1 NC_017371.1 hypothetical protein 340246 12360141 HPGAM_01705 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780068.1 339692 D 907240 CDS YP_005780069.1 385218594 12360142 340256..341548 1 NC_017371.1 COG0001 Glutamate-1-semialdehyde aminotransferase; glutamate-1-semialdehyde aminotransferase 341548 12360142 HPGAM_01710 Helicobacter pylori Gambia94/24 glutamate-1-semialdehyde aminotransferase YP_005780069.1 340256 D 907240 CDS YP_005780070.1 385218595 12360143 341553..341816 1 NC_017371.1 hypothetical protein 341816 12360143 HPGAM_01715 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780070.1 341553 D 907240 CDS YP_005780071.1 385218596 12360144 341832..342233 1 NC_017371.1 hypothetical protein 342233 12360144 HPGAM_01720 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780071.1 341832 D 907240 CDS YP_005780072.1 385218597 12360145 342317..343201 1 NC_017371.1 COG0388 Predicted amidohydrolase; hypothetical protein 343201 12360145 HPGAM_01725 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780072.1 342317 D 907240 CDS YP_005780073.1 385218598 12360146 343214..344095 1 NC_017371.1 COG0726 Predicted xylanase/chitin deacetylase; polysaccharide deacetylase 344095 12360146 HPGAM_01730 Helicobacter pylori Gambia94/24 polysaccharide deacetylase YP_005780073.1 343214 D 907240 CDS YP_005780074.1 385218599 12360147 344141..344527 1 NC_017371.1 hypothetical protein 344527 12360147 HPGAM_01735 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780074.1 344141 D 907240 CDS YP_005780075.1 385218600 12360148 344527..345492 1 NC_017371.1 COG0523 Putative GTPases (G3E family); hypothetical protein 345492 12360148 HPGAM_01740 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780075.1 344527 D 907240 CDS YP_005780076.1 385218601 12360149 complement(345498..346643) 1 NC_017371.1 COG0477 Permeases of the major facilitator superfamily; nitrite extrusion protein (narK) 346643 12360149 HPGAM_01745 Helicobacter pylori Gambia94/24 nitrite extrusion protein (narK) YP_005780076.1 345498 R 907240 CDS YP_005780077.1 385218602 12360150 complement(346848..347357) 1 NC_017371.1 COG0842 ABC-type multidrug transport system, permease component; putative ABC transporter permease 347357 12360150 HPGAM_01750 Helicobacter pylori Gambia94/24 putative ABC transporter permease YP_005780077.1 346848 R 907240 CDS YP_005780078.1 385218603 12360151 complement(347365..347604) 1 NC_017371.1 COG0842 ABC-type multidrug transport system, permease component; ABC transporter permease 347604 12360151 HPGAM_01755 Helicobacter pylori Gambia94/24 ABC transporter permease YP_005780078.1 347365 R 907240 CDS YP_005780079.1 385218604 12360152 complement(347604..348305) 1 NC_017371.1 COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein 348305 12360152 HPGAM_01760 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780079.1 347604 R 907240 CDS YP_005780080.1 385218605 12360153 348514..348690 1 NC_017371.1 hypothetical protein 348690 12360153 HPGAM_01765 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780080.1 348514 D 907240 CDS YP_005780081.1 385218606 12360154 complement(348905..349660) 1 NC_017371.1 COG0748 Putative heme iron utilization protein; putative heme iron utilization protein 349660 12360154 HPGAM_01770 Helicobacter pylori Gambia94/24 putative heme iron utilization protein YP_005780081.1 348905 R 907240 CDS YP_005780082.1 385218607 12360155 complement(349771..351396) 1 NC_017371.1 COG0018 Arginyl-tRNA synthetase; arginyl-tRNA synthetase 351396 argS 12360155 argS Helicobacter pylori Gambia94/24 arginyl-tRNA synthetase YP_005780082.1 349771 R 907240 CDS YP_005780083.1 385218608 12360156 complement(351399..351644) 1 NC_017371.1 COG1826 Sec-independent protein secretion pathway components; Sec-independent protein translocase protein tatA/E-like protein 351644 12360156 HPGAM_01780 Helicobacter pylori Gambia94/24 Sec-independent protein translocase protein tatA/E-like protein YP_005780083.1 351399 R 907240 CDS YP_005780084.1 385218609 12360157 complement(351716..352336) 1 NC_017371.1 COG0194 Guanylate kinase; guanylate kinase 352336 gmk 12360157 gmk Helicobacter pylori Gambia94/24 guanylate kinase YP_005780084.1 351716 R 907240 CDS YP_005780085.1 385218610 12360158 complement(352329..353897) 1 NC_017371.1 poly E-rich protein 353897 12360158 HPGAM_01790 Helicobacter pylori Gambia94/24 poly E-rich protein YP_005780085.1 352329 R 907240 CDS YP_005780086.1 385218611 12360159 354048..354590 1 NC_017371.1 COG1502 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthases and related enzymes; nuclease NucT 354590 12360159 HPGAM_01795 Helicobacter pylori Gambia94/24 nuclease NucT YP_005780086.1 354048 D 907240 CDS YP_005780087.1 385218612 12360160 complement(354598..355335) 1 NC_017371.1 putative Outer membrane protein 355335 12360160 HPGAM_01800 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780087.1 354598 R 907240 CDS YP_005780088.1 385218613 12360161 355472..356185 1 NC_017371.1 COG2063 Flagellar basal body L-ring protein; flagellar basal body L-ring protein 356185 flgH 12360161 flgH Helicobacter pylori Gambia94/24 flagellar basal body L-ring protein YP_005780088.1 355472 D 907240 CDS YP_005780089.1 385218614 12360162 356209..356898 1 NC_017371.1 COG1083 CMP-N-acetylneuraminic acid synthetase; CMP-N-acetylneuraminic acid synthetase 356898 12360162 HPGAM_01810 Helicobacter pylori Gambia94/24 CMP-N-acetylneuraminic acid synthetase YP_005780089.1 356209 D 907240 CDS YP_005780090.1 385218615 12360163 356889..357755 1 NC_017371.1 COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase; putative acylneuraminate cytidylyltransferase 357755 12360163 HPGAM_01815 Helicobacter pylori Gambia94/24 putative acylneuraminate cytidylyltransferase YP_005780090.1 356889 D 907240 CDS YP_005780091.1 385218616 12360164 357752..358294 1 NC_017371.1 COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins; flagellar biosynthesis protein G 358294 12360164 HPGAM_01820 Helicobacter pylori Gambia94/24 flagellar biosynthesis protein G YP_005780091.1 357752 D 907240 CDS YP_005780092.1 385218617 12360165 complement(358227..359165) 1 NC_017371.1 COG1663 Tetraacyldisaccharide-1-P 4'-kinase; tetraacyldisaccharide 4'-kinase 359165 lpxK 12360165 lpxK Helicobacter pylori Gambia94/24 tetraacyldisaccharide 4'-kinase YP_005780092.1 358227 R 907240 CDS YP_005780093.1 385218618 12360166 complement(359162..359944) 1 NC_017371.1 COG0171 NAD synthase; NAD synthetase 359944 12360166 HPGAM_01830 Helicobacter pylori Gambia94/24 NAD synthetase YP_005780093.1 359162 R 907240 CDS YP_005780094.1 385218619 12360168 360193..361185 1 NC_017371.1 COG0059 Ketol-acid reductoisomerase; ketol-acid reductoisomerase 361185 12360168 HPGAM_01835 Helicobacter pylori Gambia94/24 ketol-acid reductoisomerase YP_005780094.1 360193 D 907240 CDS YP_005780095.1 385218620 12360169 361210..362016 1 NC_017371.1 COG2894 Septum formation inhibitor-activating ATPase; cell division inhibitor 362016 12360169 HPGAM_01840 Helicobacter pylori Gambia94/24 cell division inhibitor YP_005780095.1 361210 D 907240 CDS YP_005780096.1 385218621 12360170 362013..362246 1 NC_017371.1 COG0851 Septum formation topological specificity factor; cell division topological specificity factor MinE 362246 minE 12360170 minE Helicobacter pylori Gambia94/24 cell division topological specificity factor MinE YP_005780096.1 362013 D 907240 CDS YP_005780097.1 385218622 12360171 362253..363053 1 NC_017371.1 COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake; DNA processing chain A (dprA) 363053 12360171 HPGAM_01850 Helicobacter pylori Gambia94/24 DNA processing chain A (dprA) YP_005780097.1 362253 D 907240 CDS YP_005780098.1 385218623 12360172 363050..363454 1 NC_017371.1 COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis); Holliday junction resolvase-like protein 363454 12360172 HPGAM_01855 Helicobacter pylori Gambia94/24 Holliday junction resolvase-like protein YP_005780098.1 363050 D 907240 CDS YP_005780099.1 385218624 12360173 363731..364306 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; cysteine-rich protein H 364306 12360173 HPGAM_01860 Helicobacter pylori Gambia94/24 cysteine-rich protein H YP_005780099.1 363731 D 907240 CDS YP_005780100.1 385218625 12360174 364493..364831 1 NC_017371.1 hypothetical protein 364831 12360174 HPGAM_01865 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780100.1 364493 D 907240 CDS YP_005780101.1 385218626 12360175 364815..365375 1 NC_017371.1 hypothetical protein 365375 12360175 HPGAM_01870 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780101.1 364815 D 907240 CDS YP_005780102.1 385218627 12360176 complement(365546..366427) 1 NC_017371.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 366427 12360176 HPGAM_01875 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780102.1 365546 R 907240 CDS YP_005780103.1 385218628 12360177 complement(366427..367977) 1 NC_017371.1 COG0608 Single-stranded DNA-specific exonuclease; single-stranded-DNA-specific exonuclease 367977 12360177 HPGAM_01880 Helicobacter pylori Gambia94/24 single-stranded-DNA-specific exonuclease YP_005780103.1 366427 R 907240 CDS YP_005780104.1 385218629 12360178 complement(367986..369602) 1 NC_017371.1 COG0504 CTP synthase (UTP-ammonia lyase); CTP synthetase 369602 pyrG 12360178 pyrG Helicobacter pylori Gambia94/24 CTP synthetase YP_005780104.1 367986 R 907240 CDS YP_005780105.1 385218630 12360179 369860..370522 1 NC_017371.1 COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 370522 12360179 HPGAM_01890 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780105.1 369860 D 907240 CDS YP_005780106.1 385218631 12360180 370566..372269 1 NC_017371.1 COG1766 Flagellar biosynthesis/type III secretory pathway lipoprotein; flagellar MS-ring protein 372269 fliF 12360180 fliF Helicobacter pylori Gambia94/24 flagellar MS-ring protein YP_005780106.1 370566 D 907240 CDS YP_005780107.1 385218632 12360181 372286..373317 1 NC_017371.1 COG1536 Flagellar motor switch protein; flagellar motor switch protein G 373317 fliG 12360181 fliG Helicobacter pylori Gambia94/24 flagellar motor switch protein G YP_005780107.1 372286 D 907240 CDS YP_005780108.1 385218633 12360182 373310..374080 1 NC_017371.1 COG1317 Flagellar biosynthesis/type III secretory pathway protein; flagellar assembly protein H 374080 fliH 12360182 fliH Helicobacter pylori Gambia94/24 flagellar assembly protein H YP_005780108.1 373310 D 907240 CDS YP_005780109.1 385218634 12360183 374083..375933 1 NC_017371.1 COG1154 Deoxyxylulose-5-phosphate synthase; 1-deoxy-D-xylulose-5-phosphate synthase 375933 12360183 HPGAM_01910 Helicobacter pylori Gambia94/24 1-deoxy-D-xylulose-5-phosphate synthase YP_005780109.1 374083 D 907240 CDS YP_005780110.1 385218635 12360184 375930..377744 1 NC_017371.1 COG0481 Membrane GTPase LepA; GTP-binding protein LepA 377744 12360184 HPGAM_01915 Helicobacter pylori Gambia94/24 GTP-binding protein LepA YP_005780110.1 375930 D 907240 CDS YP_005780111.1 385218636 12360185 377759..378517 1 NC_017371.1 COG0553 Superfamily II DNA/RNA helicases, SNF2 family; hypothetical protein 378517 12360185 HPGAM_01920 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780111.1 377759 D 907240 CDS YP_005780112.1 385218637 12360186 378520..378756 1 NC_017371.1 hypothetical protein 378756 12360186 HPGAM_01925 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780112.1 378520 D 907240 CDS YP_005780113.1 385218638 12360187 378831..378965 1 NC_017371.1 hypothetical protein 378965 12360187 HPGAM_01930 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780113.1 378831 D 907240 CDS YP_005780114.1 385218639 12360188 complement(379268..380077) 1 NC_017371.1 COG4786 Flagellar basal body rod protein; flagellar basal-body rod protein 380077 12360188 HPGAM_01935 Helicobacter pylori Gambia94/24 flagellar basal-body rod protein YP_005780114.1 379268 R 907240 CDS YP_005780115.1 385218640 12360189 complement(380132..381418) 1 NC_017371.1 COG0477 Permeases of the major facilitator superfamily; alpha-ketoglutarate permease 381418 12360189 HPGAM_01940 Helicobacter pylori Gambia94/24 alpha-ketoglutarate permease YP_005780115.1 380132 R 907240 CDS YP_005780116.1 385218641 12360190 381503..381628 1 NC_017371.1 hypothetical protein 381628 12360190 HPGAM_01945 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780116.1 381503 D 907240 CDS YP_005780117.1 385218642 12360191 complement(381805..384363) 1 NC_017371.1 COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins; cell division protein 384363 12360191 HPGAM_01950 Helicobacter pylori Gambia94/24 cell division protein YP_005780117.1 381805 R 907240 CDS YP_005780118.1 385218643 12360192 complement(384360..386696) 1 NC_017371.1 COG3893 Inactivated superfamily I helicase; hypothetical protein 386696 12360192 HPGAM_01955 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780118.1 384360 R 907240 CDS YP_005780119.1 385218644 12360193 complement(386693..388618) 1 NC_017371.1 COG0021 Transketolase; transketolase 388618 12360193 HPGAM_01960 Helicobacter pylori Gambia94/24 transketolase YP_005780119.1 386693 R 907240 CDS YP_005780120.1 385218645 12360194 complement(388665..389507) 1 NC_017371.1 COG0196 FAD synthase; bifunctional riboflavin kinase/FMN adenylyltransferase 389507 12360194 HPGAM_01965 Helicobacter pylori Gambia94/24 bifunctional riboflavin kinase/FMN adenylyltransferase YP_005780120.1 388665 R 907240 CDS YP_005780121.1 385218646 12360195 complement(389473..390180) 1 NC_017371.1 COG1189 Predicted rRNA methylase; putative hemolysin 390180 12360195 HPGAM_01970 Helicobacter pylori Gambia94/24 putative hemolysin YP_005780121.1 389473 R 907240 CDS YP_005780122.1 385218647 12360196 complement(390180..390695) 1 NC_017371.1 hypothetical protein 390695 12360196 HPGAM_01975 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780122.1 390180 R 907240 CDS YP_005780123.1 385218648 12360197 390762..391685 1 NC_017371.1 COG0540 Aspartate carbamoyltransferase, catalytic chain; aspartate carbamoyltransferase catalytic subunit 391685 pyrB 12360197 pyrB Helicobacter pylori Gambia94/24 aspartate carbamoyltransferase catalytic subunit YP_005780123.1 390762 D 907240 CDS YP_005780124.1 385218649 12360198 391977..393416 1 NC_017371.1 putative Outer membrane protein 393416 12360198 HPGAM_01985 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780124.1 391977 D 907240 CDS YP_005780125.1 385218650 12360199 393507..395162 1 NC_017371.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; multi-drug resistance protein 395162 12360199 HPGAM_01990 Helicobacter pylori Gambia94/24 multi-drug resistance protein YP_005780125.1 393507 D 907240 CDS YP_005780126.1 385218651 12360200 395156..395779 1 NC_017371.1 hypothetical protein 395779 12360200 HPGAM_01995 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780126.1 395156 D 907240 CDS YP_005780127.1 385218652 12360201 395783..396352 1 NC_017371.1 COG1787 Predicted endonuclease distantly related to archaeal Holliday junction resolvase and Mrr-like restriction enzymes; Holliday junction resolvase and Mrr protein 396352 12360201 HPGAM_02000 Helicobacter pylori Gambia94/24 Holliday junction resolvase and Mrr protein YP_005780127.1 395783 D 907240 CDS YP_005780128.1 385218653 12360202 396485..397612 1 NC_017371.1 COG1106 Predicted ATPases; hypothetical protein 397612 12360202 HPGAM_02005 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780128.1 396485 D 907240 CDS YP_005780129.1 385218654 12360203 397605..398321 1 NC_017371.1 hypothetical protein 398321 12360203 HPGAM_02010 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780129.1 397605 D 907240 CDS YP_005780130.1 385218655 12360204 398378..399373 1 NC_017371.1 COG3376 High-affinity nickel permease; high-affinity nickel-transport protein 399373 12360204 HPGAM_02015 Helicobacter pylori Gambia94/24 high-affinity nickel-transport protein YP_005780130.1 398378 D 907240 CDS YP_005780131.1 385218656 12360205 complement(399377..399898) 1 NC_017371.1 hypothetical protein 399898 12360205 HPGAM_02020 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780131.1 399377 R 907240 CDS YP_005780132.1 385218657 12360206 400034..401350 1 NC_017371.1 hypothetical protein 401350 12360206 HPGAM_02025 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780132.1 400034 D 907240 CDS YP_005780133.1 385218658 12360207 complement(401373..402188) 1 NC_017371.1 hypothetical protein 402188 12360207 HPGAM_02030 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780133.1 401373 R 907240 CDS YP_005780134.1 385218659 12360208 complement(402446..402646) 1 NC_017371.1 COG2608 Copper chaperone; COP-associated protein 402646 12360208 HPGAM_02035 Helicobacter pylori Gambia94/24 COP-associated protein YP_005780134.1 402446 R 907240 CDS YP_005780135.1 385218660 12360209 complement(402647..404872) 1 NC_017371.1 COG2217 Cation transport ATPase; copper-transporting ATPase 404872 12360209 HPGAM_02040 Helicobacter pylori Gambia94/24 copper-transporting ATPase YP_005780135.1 402647 R 907240 CDS YP_005780136.1 385218661 12360210 complement(404869..405582) 1 NC_017371.1 COG1183 Phosphatidylserine synthase; phosphatidylserine synthase 405582 12360210 HPGAM_02045 Helicobacter pylori Gambia94/24 phosphatidylserine synthase YP_005780136.1 404869 R 907240 CDS YP_005780137.1 385218662 12360211 complement(405572..405832) 1 NC_017371.1 hypothetical protein 405832 12360211 HPGAM_02050 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780137.1 405572 R 907240 CDS YP_005780138.1 385218663 12360212 complement(405835..407733) 1 NC_017371.1 COG0465 ATP-dependent Zn proteases; ATP-dependent zinc metallopeptidase 407733 12360212 HPGAM_02055 Helicobacter pylori Gambia94/24 ATP-dependent zinc metallopeptidase YP_005780138.1 405835 R 907240 CDS YP_005780139.1 385218664 12360213 complement(407742..408731) 1 NC_017371.1 COG2264 Ribosomal protein L11 methylase; 50S ribosomal protein L11 methyltransferase 408731 prmA 12360213 prmA Helicobacter pylori Gambia94/24 50S ribosomal protein L11 methyltransferase YP_005780139.1 407742 R 907240 CDS YP_005780140.1 385218665 12360214 complement(408732..409106) 1 NC_017371.1 COG0784 FOG: CheY-like receiver; Chemotactic response regulator, two-component system 409106 12360214 HPGAM_02065 Helicobacter pylori Gambia94/24 Chemotactic response regulator, two-component system YP_005780140.1 408732 R 907240 CDS YP_005780141.1 385218666 12360215 409396..409998 1 NC_017371.1 hypothetical protein 409998 12360215 HPGAM_02070 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780141.1 409396 D 907240 CDS YP_005780142.1 385218667 12360217 complement(410144..410551) 1 NC_017371.1 hypothetical protein 410551 12360217 HPGAM_02075 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780142.1 410144 R 907240 CDS YP_005780143.1 385218668 12360218 complement(410554..410796) 1 NC_017371.1 hypothetical protein 410796 12360218 HPGAM_02080 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780143.1 410554 R 907240 CDS YP_005780144.1 385218669 12360219 complement(410790..411326) 1 NC_017371.1 COG0357 Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division; 16S rRNA methyltransferase GidB 411326 gidB 12360219 gidB Helicobacter pylori Gambia94/24 16S rRNA methyltransferase GidB YP_005780144.1 410790 R 907240 CDS YP_005780145.1 385218670 12360220 complement(411323..412360) 1 NC_017371.1 COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); S-adenosylmethionine--tRNA ribosyltransferase-isomerase 412360 queA 12360220 queA Helicobacter pylori Gambia94/24 S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_005780145.1 411323 R 907240 CDS YP_005780146.1 385218671 12360221 complement(412361..413110) 1 NC_017371.1 COG0805 Sec-independent protein secretion pathway component TatC; Sec-independent protein translocase protein tatC-like protein 413110 12360221 HPGAM_02095 Helicobacter pylori Gambia94/24 Sec-independent protein translocase protein tatC-like protein YP_005780146.1 412361 R 907240 CDS YP_005780147.1 385218672 12360222 complement(413103..413555) 1 NC_017371.1 COG1826 Sec-independent protein secretion pathway components; sec-independent translocase 413555 12360222 HPGAM_02100 Helicobacter pylori Gambia94/24 sec-independent translocase YP_005780147.1 413103 R 907240 CDS YP_005780148.1 385218673 12360223 complement(413622..414632) 1 NC_017371.1 COG2255 Holliday junction resolvasome, helicase subunit; Holliday junction DNA helicase RuvB 414632 ruvB 12360223 ruvB Helicobacter pylori Gambia94/24 Holliday junction DNA helicase RuvB YP_005780148.1 413622 R 907240 CDS YP_005780149.1 385218674 12360224 complement(414633..415445) 1 NC_017371.1 COG0413 Ketopantoate hydroxymethyltransferase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 415445 panB 12360224 panB Helicobacter pylori Gambia94/24 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005780149.1 414633 R 907240 CDS YP_005780150.1 385218675 12360225 415592..416314 1 NC_017371.1 hypothetical protein 416314 12360225 HPGAM_02115 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780150.1 415592 D 907240 CDS YP_005780151.1 385218676 12360226 416304..417161 1 NC_017371.1 hypothetical protein 417161 12360226 HPGAM_02120 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780151.1 416304 D 907240 CDS YP_005780152.1 385218677 12360227 417173..418114 1 NC_017371.1 hypothetical protein 418114 12360227 HPGAM_02125 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780152.1 417173 D 907240 CDS YP_005780153.1 385218678 12360228 418124..419446 1 NC_017371.1 COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 419446 12360228 HPGAM_02130 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780153.1 418124 D 907240 CDS YP_005780154.1 385218679 12360229 419449..420033 1 NC_017371.1 COG0850 Septum formation inhibitor; septum formation inhibitor 420033 minC 12360229 minC Helicobacter pylori Gambia94/24 septum formation inhibitor YP_005780154.1 419449 D 907240 CDS YP_005780155.1 385218680 12360230 420030..420917 1 NC_017371.1 COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 420917 lpxC 12360230 lpxC Helicobacter pylori Gambia94/24 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_005780155.1 420030 D 907240 CDS YP_005780156.1 385218681 12360231 420939..421436 1 NC_017371.1 COG1214 Inactive homolog of metal-dependent proteases, putative molecular chaperone; hypothetical protein 421436 12360231 HPGAM_02145 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780156.1 420939 D 907240 CDS YP_005780157.1 385218682 12360232 421490..422371 1 NC_017371.1 COG0083 Homoserine kinase; homoserine kinase 422371 12360232 HPGAM_02150 Helicobacter pylori Gambia94/24 homoserine kinase YP_005780157.1 421490 D 907240 CDS YP_005780158.1 385218683 12360233 422358..422612 1 NC_017371.1 COG2740 Predicted nucleic-acid-binding protein implicated in transcription termination; hypothetical protein 422612 12360233 HPGAM_02155 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780158.1 422358 D 907240 CDS YP_005780159.1 385218684 12360234 422609..425464 1 NC_017371.1 COG0532 Translation initiation factor 2 (IF-2; GTPase); translation initiation factor IF-2 425464 infB 12360234 infB Helicobacter pylori Gambia94/24 translation initiation factor IF-2 YP_005780159.1 422609 D 907240 CDS YP_005780160.1 385218685 12360235 425464..425799 1 NC_017371.1 COG0858 Ribosome-binding factor A; ribosome-binding factor A 425799 rbfA 12360235 rbfA Helicobacter pylori Gambia94/24 ribosome-binding factor A YP_005780160.1 425464 D 907240 CDS YP_005780161.1 385218686 12360236 425792..426232 1 NC_017371.1 COG0779 Uncharacterized protein conserved in bacteria; Ribosome maturation factor rimP 426232 12360236 HPGAM_02170 Helicobacter pylori Gambia94/24 Ribosome maturation factor rimP YP_005780161.1 425792 D 907240 CDS YP_005780162.1 385218687 12360237 426394..427506 1 NC_017371.1 COG1408 Predicted phosphohydrolases; hypothetical protein 427506 12360237 HPGAM_02175 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780162.1 426394 D 907240 CDS YP_005780163.1 385218688 12360238 427686..427799 1 NC_017371.1 hypothetical protein 427799 12360238 HPGAM_02180 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780163.1 427686 D 907240 CDS YP_005780164.1 385218689 12360239 427859..428530 1 NC_017371.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; transcriptional regulator 428530 12360239 HPGAM_02185 Helicobacter pylori Gambia94/24 transcriptional regulator YP_005780164.1 427859 D 907240 CDS YP_005780165.1 385218690 12360240 complement(429322..430365) 1 NC_017371.1 COG2404 Predicted phosphohydrolase (DHH superfamily); hypothetical protein 430365 12360240 HPGAM_02190 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780165.1 429322 R 907240 CDS YP_005780166.1 385218691 12360241 complement(430399..432600) 1 NC_017371.1 COG1298 Flagellar biosynthesis pathway, component FlhA; flagellar biosynthesis protein FlhA 432600 flhA 12360241 flhA Helicobacter pylori Gambia94/24 flagellar biosynthesis protein FlhA YP_005780166.1 430399 R 907240 CDS YP_005780167.1 385218692 12360242 432735..433007 1 NC_017371.1 COG0184 Ribosomal protein S15P/S13E; 30S ribosomal protein S15 433007 rpsO 12360242 rpsO Helicobacter pylori Gambia94/24 30S ribosomal protein S15 YP_005780167.1 432735 D 907240 CDS YP_005780168.1 385218693 12360243 433048..434352 1 NC_017371.1 COG3307 Lipid A core - O-antigen ligase and related enzymes; hypothetical protein 434352 12360243 HPGAM_02205 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780168.1 433048 D 907240 CDS YP_005780169.1 385218694 12360244 434462..434974 1 NC_017371.1 COG0757 3-dehydroquinate dehydratase II; 3-dehydroquinate dehydratase 434974 12360244 HPGAM_02210 Helicobacter pylori Gambia94/24 3-dehydroquinate dehydratase YP_005780169.1 434462 D 907240 CDS YP_005780170.1 385218695 12360245 434987..436060 1 NC_017371.1 COG0006 Xaa-Pro aminopeptidase; X-Pro aminopeptidase 436060 12360245 HPGAM_02215 Helicobacter pylori Gambia94/24 X-Pro aminopeptidase YP_005780170.1 434987 D 907240 CDS YP_005780171.1 385218696 12360246 436057..436548 1 NC_017371.1 COG0801 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 436548 12360246 HPGAM_02220 Helicobacter pylori Gambia94/24 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_005780171.1 436057 D 907240 CDS YP_005780172.1 385218697 12360247 436545..437915 1 NC_017371.1 COG1419 Flagellar GTP-binding protein; flagellar biosynthesis regulator FlhF 437915 flhF 12360247 flhF Helicobacter pylori Gambia94/24 flagellar biosynthesis regulator FlhF YP_005780172.1 436545 D 907240 CDS YP_005780173.1 385218698 12360248 437912..438796 1 NC_017371.1 COG0455 ATPases involved in chromosome partitioning; hypothetical protein 438796 12360248 HPGAM_02230 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780173.1 437912 D 907240 CDS YP_005780174.1 385218699 12360249 439093..439860 1 NC_017371.1 COG1191 DNA-directed RNA polymerase specialized sigma subunit; flagellar biosynthesis sigma factor 439860 fliA 12360249 fliA Helicobacter pylori Gambia94/24 flagellar biosynthesis sigma factor YP_005780174.1 439093 D 907240 CDS YP_005780175.1 385218700 12360250 439853..440917 1 NC_017371.1 COG1868 Flagellar motor switch protein; flagellar motor switch protein FliM 440917 fliM 12360250 fliM Helicobacter pylori Gambia94/24 flagellar motor switch protein FliM YP_005780175.1 439853 D 907240 CDS YP_005780176.1 385218701 12360251 440921..441778 1 NC_017371.1 COG1776 Chemotaxis protein CheC, inhibitor of MCP methylation; flagellar motor switch protein FliY 441778 12360251 HPGAM_02245 Helicobacter pylori Gambia94/24 flagellar motor switch protein FliY YP_005780176.1 440921 D 907240 CDS YP_005780177.1 385218702 12360252 441807..442343 1 NC_017371.1 COG2731 Beta-galactosidase, beta subunit; hypothetical protein 442343 12360252 HPGAM_02250 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780177.1 441807 D 907240 CDS YP_005780178.1 385218703 12360253 442340..442843 1 NC_017371.1 COG4731 Uncharacterized protein conserved in bacteria; hypothetical protein 442843 12360253 HPGAM_02255 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780178.1 442340 D 907240 CDS YP_005780179.1 385218704 12360254 complement(442865..443317) 1 NC_017371.1 COG0735 Fe2+/Zn2+ uptake regulation proteins; ferric uptake regulation protein 443317 12360254 HPGAM_02260 Helicobacter pylori Gambia94/24 ferric uptake regulation protein YP_005780179.1 442865 R 907240 CDS YP_005780180.1 385218705 12360255 complement(443477..444652) 1 NC_017371.1 COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; recombination factor protein RarA 444652 12360255 HPGAM_02265 Helicobacter pylori Gambia94/24 recombination factor protein RarA YP_005780180.1 443477 R 907240 CDS YP_005780181.1 385218706 12360256 complement(444649..445020) 1 NC_017371.1 COG0789 Predicted transcriptional regulators; heat shock transcriptional regulator 445020 12360256 HPGAM_02270 Helicobacter pylori Gambia94/24 heat shock transcriptional regulator YP_005780181.1 444649 R 907240 CDS YP_005780182.1 385218707 12360257 complement(445030..445896) 1 NC_017371.1 COG2214 DnaJ-class molecular chaperone; putative co-chaperone with DnaK 445896 12360257 HPGAM_02275 Helicobacter pylori Gambia94/24 putative co-chaperone with DnaK YP_005780182.1 445030 R 907240 CDS YP_005780183.1 385218708 12360258 446064..447314 1 NC_017371.1 hypothetical protein 447314 12360258 HPGAM_02280 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780183.1 446064 D 907240 CDS YP_005780184.1 385218709 12360259 complement(447311..447427) 1 NC_017371.1 hypothetical protein 447427 12360259 HPGAM_02285 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780184.1 447311 R 907240 CDS YP_005780185.1 385218710 12360260 complement(447552..448328) 1 NC_017371.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI); 5'-3' exonuclease 448328 12360260 HPGAM_02290 Helicobacter pylori Gambia94/24 5'-3' exonuclease YP_005780185.1 447552 R 907240 CDS YP_005780186.1 385218711 12360261 complement(448644..449540) 1 NC_017371.1 COG0784 FOG: CheY-like receiver; response regulator 449540 12360261 HPGAM_02295 Helicobacter pylori Gambia94/24 response regulator YP_005780186.1 448644 R 907240 CDS YP_005780187.1 385218712 12360262 complement(449563..450783) 1 NC_017371.1 COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 450783 ispDF 12360262 ispDF Helicobacter pylori Gambia94/24 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_005780187.1 449563 R 907240 CDS YP_005780188.1 385218713 12360263 complement(450805..452235) 1 NC_017371.1 COG0265 Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain; protease DO 452235 12360263 HPGAM_02305 Helicobacter pylori Gambia94/24 protease DO YP_005780188.1 450805 R 907240 CDS YP_005780189.1 385218714 12360264 complement(452280..453707) 1 NC_017371.1 COG0833 Amino acid transporters; amino acid permease 453707 12360264 HPGAM_02310 Helicobacter pylori Gambia94/24 amino acid permease YP_005780189.1 452280 R 907240 CDS YP_005780190.1 385218715 12360265 complement(453962..454501) 1 NC_017371.1 COG0558 Phosphatidylglycerophosphate synthase; phosphatidylglycerophosphate synthase 454501 12360265 HPGAM_02315 Helicobacter pylori Gambia94/24 phosphatidylglycerophosphate synthase YP_005780190.1 453962 R 907240 CDS YP_005780191.1 385218716 12360266 complement(454498..455106) 1 NC_017371.1 hypothetical protein 455106 12360266 HPGAM_02320 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780191.1 454498 R 907240 CDS YP_005780192.1 385218717 12360267 complement(455116..455904) 1 NC_017371.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 7-alpha-hydroxysteroid dehydrogenase 455904 12360267 HPGAM_02325 Helicobacter pylori Gambia94/24 7-alpha-hydroxysteroid dehydrogenase YP_005780192.1 455116 R 907240 CDS YP_005780193.1 385218718 12360268 complement(455901..456803) 1 NC_017371.1 COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; dihydrodipicolinate synthase 456803 12360268 HPGAM_02330 Helicobacter pylori Gambia94/24 dihydrodipicolinate synthase YP_005780193.1 455901 R 907240 CDS YP_005780194.1 385218719 12360269 complement(456818..458152) 1 NC_017371.1 COG0612 Predicted Zn-dependent peptidases; putative zinc protease 458152 12360269 HPGAM_02335 Helicobacter pylori Gambia94/24 putative zinc protease YP_005780194.1 456818 R 907240 CDS YP_005780195.1 385218720 12360270 complement(458149..459204) 1 NC_017371.1 COG0167 Dihydroorotate dehydrogenase; dihydroorotate dehydrogenase 2 459204 12360270 HPGAM_02340 Helicobacter pylori Gambia94/24 dihydroorotate dehydrogenase 2 YP_005780195.1 458149 R 907240 CDS YP_005780196.1 385218721 12360271 complement(459243..461270) 1 NC_017371.1 COG0855 Polyphosphate kinase; polyphosphate kinase 461270 12360271 HPGAM_02345 Helicobacter pylori Gambia94/24 polyphosphate kinase YP_005780196.1 459243 R 907240 CDS YP_005780197.1 385218722 12360273 complement(461499..462743) 1 NC_017371.1 COG0732 Restriction endonuclease S subunits; Type I restriction/modification specificity protein 462743 12360273 HPGAM_02350 Helicobacter pylori Gambia94/24 Type I restriction/modification specificity protein YP_005780197.1 461499 R 907240 CDS YP_005780198.1 385218723 12360274 complement(462736..464367) 1 NC_017371.1 COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein 464367 12360274 HPGAM_02355 Helicobacter pylori Gambia94/24 type I restriction enzyme M protein YP_005780198.1 462736 R 907240 CDS YP_005780199.1 385218724 12360275 complement(464360..467491) 1 NC_017371.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein 467491 12360275 HPGAM_02360 Helicobacter pylori Gambia94/24 type I restriction enzyme R protein YP_005780199.1 464360 R 907240 CDS YP_005780200.1 385218725 12360276 complement(467539..469434) 1 NC_017371.1 COG2604 Uncharacterized protein conserved in bacteria; hypothetical protein 469434 12360276 HPGAM_02365 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780200.1 467539 R 907240 CDS YP_005780201.1 385218726 12360277 complement(469459..470226) 1 NC_017371.1 hypothetical protein 470226 12360277 HPGAM_02370 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780201.1 469459 R 907240 CDS YP_005780202.1 385218727 12360278 complement(470236..470550) 1 NC_017371.1 hypothetical protein 470550 12360278 HPGAM_02375 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780202.1 470236 R 907240 CDS YP_005780203.1 385218728 12360279 complement(470552..472039) 1 NC_017371.1 COG2048 Heterodisulfide reductase, subunit B; hypothetical protein 472039 12360279 HPGAM_02380 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780203.1 470552 R 907240 CDS YP_005780204.1 385218729 12360280 complement(472051..472539) 1 NC_017371.1 hypothetical protein 472539 12360280 HPGAM_02385 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780204.1 472051 R 907240 CDS YP_005780205.1 385218730 12360281 complement(472524..474260) 1 NC_017371.1 COG1164 Oligoendopeptidase F; oligoendopeptidase F 474260 12360281 HPGAM_02390 Helicobacter pylori Gambia94/24 oligoendopeptidase F YP_005780205.1 472524 R 907240 CDS YP_005780206.1 385218731 12360282 complement(474358..475608) 1 NC_017371.1 COG0475 Kef-type K+ transport systems, membrane components; glutathione-regulated potassium-efflux system protein 475608 12360282 HPGAM_02395 Helicobacter pylori Gambia94/24 glutathione-regulated potassium-efflux system protein YP_005780206.1 474358 R 907240 CDS YP_005780207.1 385218732 12360283 complement(475924..476484) 1 NC_017371.1 hypothetical protein 476484 12360283 HPGAM_02400 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780207.1 475924 R 907240 CDS YP_005780208.1 385218733 12360284 476711..477451 1 NC_017371.1 COG0725 ABC-type molybdate transport system, periplasmic component; molybdate ABC transporter periplasmic-binding protein 477451 12360284 HPGAM_02405 Helicobacter pylori Gambia94/24 molybdate ABC transporter periplasmic-binding protein YP_005780208.1 476711 D 907240 CDS YP_005780209.1 385218734 12360285 477473..478147 1 NC_017371.1 COG4149 ABC-type molybdate transport system, permease component; molybdenum ABC transporter ModB 478147 12360285 HPGAM_02410 Helicobacter pylori Gambia94/24 molybdenum ABC transporter ModB YP_005780209.1 477473 D 907240 CDS YP_005780210.1 385218735 12360286 478144..478941 1 NC_017371.1 COG1118 ABC-type sulfate/molybdate transport systems, ATPase component; molybdenum ABC transporter ModD 478941 12360286 HPGAM_02415 Helicobacter pylori Gambia94/24 molybdenum ABC transporter ModD YP_005780210.1 478144 D 907240 CDS YP_005780211.1 385218736 12360287 complement(479113..480504) 1 NC_017371.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamyl-tRNA synthetase 480504 gltX 12360287 gltX Helicobacter pylori Gambia94/24 glutamyl-tRNA synthetase YP_005780211.1 479113 R 907240 CDS YP_005780212.1 385218737 12360288 480623..481729 1 NC_017371.1 putative Outer membrane protein 481729 12360288 HPGAM_02425 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780212.1 480623 D 907240 CDS YP_005780213.1 385218738 12360289 483340..484188 1 NC_017371.1 COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein 484188 12360289 HPGAM_02430 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780213.1 483340 D 907240 CDS YP_005780214.1 385218739 12360290 484234..486033 1 NC_017371.1 COG1217 Predicted membrane GTPase involved in stress response; GTP-binding protein TypA 486033 12360290 HPGAM_02435 Helicobacter pylori Gambia94/24 GTP-binding protein TypA YP_005780214.1 484234 D 907240 CDS YP_005780215.1 385218740 12360291 486049..486978 1 NC_017371.1 COG0338 Site-specific DNA methylase; putative type II DNA modification enzyme (methyltransferase) 486978 12360291 HPGAM_02440 Helicobacter pylori Gambia94/24 putative type II DNA modification enzyme (methyltransferase) YP_005780215.1 486049 D 907240 CDS YP_005780216.1 385218741 12360292 486981..487466 1 NC_017371.1 type II restriction endonuclease 487466 12360292 HPGAM_02445 Helicobacter pylori Gambia94/24 type II restriction endonuclease YP_005780216.1 486981 D 907240 CDS YP_005780217.1 385218742 12360293 487693..488748 1 NC_017371.1 COG0270 Site-specific DNA methylase; type II DNA modification (methyltransferase) 488748 12360293 HPGAM_02450 Helicobacter pylori Gambia94/24 type II DNA modification (methyltransferase) YP_005780217.1 487693 D 907240 CDS YP_005780218.1 385218743 12360294 complement(489732..490676) 1 NC_017371.1 COG0753 Catalase; catalase-like protein 490676 12360294 HPGAM_02465 Helicobacter pylori Gambia94/24 catalase-like protein YP_005780218.1 489732 R 907240 CDS YP_005780219.1 385218744 12360295 490956..492542 1 NC_017371.1 hypothetical protein 492542 12360295 HPGAM_02470 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780219.1 490956 D 907240 CDS YP_005780220.1 385218745 12360296 492614..494011 1 NC_017371.1 putative Outer membrane protein 494011 12360296 HPGAM_02475 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780220.1 492614 D 907240 CDS YP_005780221.1 385218746 12360297 complement(494237..494362) 1 NC_017371.1 hypothetical protein 494362 12360297 HPGAM_02480 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780221.1 494237 R 907240 CDS YP_005780222.1 385218747 12360298 complement(494375..494611) 1 NC_017371.1 hypothetical protein 494611 12360298 HPGAM_02485 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780222.1 494375 R 907240 CDS YP_005780223.1 385218748 12360299 494826..497351 1 NC_017371.1 hypothetical protein 497351 12360299 HPGAM_02490 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780223.1 494826 D 907240 CDS YP_005780224.1 385218749 12360300 497355..497780 1 NC_017371.1 hypothetical protein 497780 12360300 HPGAM_02495 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780224.1 497355 D 907240 CDS YP_005780225.1 385218750 12360301 497777..498322 1 NC_017371.1 hypothetical protein 498322 12360301 HPGAM_02500 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780225.1 497777 D 907240 CDS YP_005780226.1 385218751 12360302 complement(498562..499698) 1 NC_017371.1 COG1226 Kef-type K+ transport systems, predicted NAD-binding component; putative potassium channel protein 499698 12360302 HPGAM_02505 Helicobacter pylori Gambia94/24 putative potassium channel protein YP_005780226.1 498562 R 907240 CDS YP_005780227.1 385218752 12360303 complement(499885..500073) 1 NC_017371.1 COG0227 Ribosomal protein L28; 50S ribosomal protein L28 500073 rpmB 12360303 rpmB Helicobacter pylori Gambia94/24 50S ribosomal protein L28 YP_005780227.1 499885 R 907240 CDS YP_005780228.1 385218753 12360304 complement(500173..501021) 1 NC_017371.1 HpaA-like protein 501021 12360304 HPGAM_02515 Helicobacter pylori Gambia94/24 HpaA-like protein YP_005780228.1 500173 R 907240 CDS YP_005780229.1 385218754 12360305 501143..502204 1 NC_017371.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; phospho-N-acetylmuramoyl-pentapeptide- transferase 502204 mraY 12360305 mraY Helicobacter pylori Gambia94/24 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005780229.1 501143 D 907240 CDS YP_005780230.1 385218755 12360306 502206..503474 1 NC_017371.1 COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 503474 murD 12360306 murD Helicobacter pylori Gambia94/24 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_005780230.1 502206 D 907240 CDS YP_005780231.1 385218756 12360307 complement(503471..503731) 1 NC_017371.1 hypothetical protein 503731 12360307 HPGAM_02530 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780231.1 503471 R 907240 CDS YP_005780232.1 385218757 12360308 complement(503721..504122) 1 NC_017371.1 COG0824 Predicted thioesterase; putative thioesterase 504122 12360308 HPGAM_02535 Helicobacter pylori Gambia94/24 putative thioesterase YP_005780232.1 503721 R 907240 CDS YP_005780233.1 385218758 12360309 504354..505682 1 NC_017371.1 COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 505682 12360309 HPGAM_02540 Helicobacter pylori Gambia94/24 sodium- and chloride-dependent transporter YP_005780233.1 504354 D 907240 CDS YP_005780234.1 385218759 12360310 505693..507021 1 NC_017371.1 COG0733 Na+-dependent transporters of the SNF family; sodium- and chloride-dependent transporter 507021 12360310 HPGAM_02545 Helicobacter pylori Gambia94/24 sodium- and chloride-dependent transporter YP_005780234.1 505693 D 907240 CDS YP_005780235.1 385218760 12360311 508158..509282 1 NC_017371.1 COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); DNA polymerase III subunit beta 509282 12360311 HPGAM_02560 Helicobacter pylori Gambia94/24 DNA polymerase III subunit beta YP_005780235.1 508158 D 907240 CDS YP_005780236.1 385218761 12360312 509295..511616 1 NC_017371.1 COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit; DNA gyrase subunit B 511616 gyrB 12360312 gyrB Helicobacter pylori Gambia94/24 DNA gyrase subunit B YP_005780236.1 509295 D 907240 CDS YP_005780237.1 385218762 12360313 511658..512650 1 NC_017371.1 hypothetical protein 512650 12360313 HPGAM_02570 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780237.1 511658 D 907240 CDS YP_005780238.1 385218763 12360314 512637..513383 1 NC_017371.1 hypothetical protein 513383 12360314 HPGAM_02575 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780238.1 512637 D 907240 CDS YP_005780239.1 385218764 12360315 513596..514816 1 NC_017371.1 COG0739 Membrane proteins related to metalloendopeptidases; putative Outer membrane protein 514816 12360315 HPGAM_02580 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780239.1 513596 D 907240 CDS YP_005780240.1 385218765 12360316 514816..515454 1 NC_017371.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; hypothetical protein 515454 12360316 HPGAM_02585 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780240.1 514816 D 907240 CDS YP_005780241.1 385218766 12360317 515447..516817 1 NC_017371.1 hypothetical protein 516817 12360317 HPGAM_02590 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780241.1 515447 D 907240 CDS YP_005780242.1 385218767 12360318 516822..518201 1 NC_017371.1 COG0277 FAD/FMN-containing dehydrogenases; putative glycolate oxidase 518201 12360318 HPGAM_02595 Helicobacter pylori Gambia94/24 putative glycolate oxidase YP_005780242.1 516822 D 907240 CDS YP_005780243.1 385218768 12360319 518224..518988 1 NC_017371.1 COG0289 Dihydrodipicolinate reductase; dihydrodipicolinate reductase 518988 12360319 HPGAM_02600 Helicobacter pylori Gambia94/24 dihydrodipicolinate reductase YP_005780243.1 518224 D 907240 CDS YP_005780244.1 385218769 12360320 519401..519589 1 NC_017371.1 urease-enhancing factor 519589 12360320 HPGAM_02605 Helicobacter pylori Gambia94/24 urease-enhancing factor YP_005780244.1 519401 D 907240 CDS YP_005780245.1 385218770 12360321 complement(519681..519779) 1 NC_017371.1 hypothetical protein 519779 12360321 HPGAM_02610 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780245.1 519681 R 907240 CDS YP_005780246.1 385218771 12360322 complement(520309..521754) 1 NC_017371.1 COG0174 Glutamine synthetase; glutamine synthetase 521754 12360322 HPGAM_02615 Helicobacter pylori Gambia94/24 glutamine synthetase YP_005780246.1 520309 R 907240 CDS YP_005780247.1 385218772 12360323 521891..523999 1 NC_017371.1 COG1479 Uncharacterized conserved protein; hypothetical protein 523999 12360323 HPGAM_02620 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780247.1 521891 D 907240 CDS YP_005780248.1 385218773 12360324 524062..524511 1 NC_017371.1 COG0359 Ribosomal protein L9; 50S ribosomal protein L9 524511 rplI 12360324 rplI Helicobacter pylori Gambia94/24 50S ribosomal protein L9 YP_005780248.1 524062 D 907240 CDS YP_005780249.1 385218774 12360325 524515..525057 1 NC_017371.1 COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit; ATP-dependent protease subunit HslV 525057 12360325 HPGAM_02630 Helicobacter pylori Gambia94/24 ATP-dependent protease subunit HslV YP_005780249.1 524515 D 907240 CDS YP_005780250.1 385218775 12360326 525057..526388 1 NC_017371.1 COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit; ATP-dependent protease ATP-binding subunit HslU 526388 hslU 12360326 hslU Helicobacter pylori Gambia94/24 ATP-dependent protease ATP-binding subunit HslU YP_005780250.1 525057 D 907240 CDS YP_005780251.1 385218776 12360327 526388..527293 1 NC_017371.1 COG1159 GTPase; GTPase Era 527293 era 12360327 era Helicobacter pylori Gambia94/24 GTPase Era YP_005780251.1 526388 D 907240 CDS YP_005780252.1 385218777 12360328 527290..528282 1 NC_017371.1 COG3034 Uncharacterized protein conserved in bacteria; hypothetical protein 528282 12360328 HPGAM_02645 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780252.1 527290 D 907240 CDS YP_005780253.1 385218778 12360329 complement(528360..529190) 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 529190 12360329 HPGAM_02650 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780253.1 528360 R 907240 CDS YP_005780254.1 385218779 12360330 529531..529878 1 NC_017371.1 putative cag island protein 529878 12360330 HPGAM_02655 Helicobacter pylori Gambia94/24 putative cag island protein YP_005780254.1 529531 D 907240 CDS YP_005780255.1 385218780 12360331 530021..530680 1 NC_017371.1 COG0551 Zn-finger domain associated with topoisomerase type I; cag island protein 530680 12360331 HPGAM_02660 Helicobacter pylori Gambia94/24 cag island protein YP_005780255.1 530021 D 907240 CDS YP_005780256.1 385218781 12360332 530673..532118 1 NC_017371.1 cag island protein 532118 12360332 HPGAM_02665 Helicobacter pylori Gambia94/24 cag island protein YP_005780256.1 530673 D 907240 CDS YP_005780257.1 385218782 12360333 532128..532637 1 NC_017371.1 cag pathogenicity island protein (cag4) 532637 12360333 HPGAM_02670 Helicobacter pylori Gambia94/24 cag pathogenicity island protein (cag4) YP_005780257.1 532128 D 907240 CDS YP_005780258.1 385218783 12360334 532950..533051 1 NC_017371.1 hypothetical protein 533051 12360334 HPGAM_02675 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780258.1 532950 D 907240 CDS YP_005780259.1 385218784 12360335 complement(533116..535362) 1 NC_017371.1 COG3505 Type IV secretory pathway, VirD4 components; CAG pathogenicity island protein 5 535362 12360335 HPGAM_02680 Helicobacter pylori Gambia94/24 CAG pathogenicity island protein 5 YP_005780259.1 533116 R 907240 CDS YP_005780260.1 385218785 12360336 complement(535371..536363) 1 NC_017371.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; cag island protein, DNA transfer protein 536363 12360336 HPGAM_02685 Helicobacter pylori Gambia94/24 cag island protein, DNA transfer protein YP_005780260.1 535371 R 907240 CDS YP_005780261.1 385218786 12360337 complement(536368..536967) 1 NC_017371.1 cag pathogenicity island protein (cag6) 536967 12360337 HPGAM_02690 Helicobacter pylori Gambia94/24 cag pathogenicity island protein (cag6) YP_005780261.1 536368 R 907240 CDS YP_005780262.1 385218787 12360338 complement(537102..542918) 1 NC_017371.1 COG2948 Type IV secretory pathway, VirB10 components; cag pathogenicity island protein Y VirB10-like protein 542918 12360338 HPGAM_02695 Helicobacter pylori Gambia94/24 cag pathogenicity island protein Y VirB10-like protein YP_005780262.1 537102 R 907240 CDS YP_005780263.1 385218788 12360339 complement(542933..544498) 1 NC_017371.1 COG3504 Type IV secretory pathway, VirB9 components; cag pathogenicity island protein X 544498 12360339 HPGAM_02700 Helicobacter pylori Gambia94/24 cag pathogenicity island protein X YP_005780263.1 542933 R 907240 CDS YP_005780264.1 385218789 12360340 complement(544551..546158) 1 NC_017371.1 cag pathogenicity island protein W 546158 12360340 HPGAM_02705 Helicobacter pylori Gambia94/24 cag pathogenicity island protein W YP_005780264.1 544551 R 907240 CDS YP_005780265.1 385218790 12360341 complement(546163..546921) 1 NC_017371.1 COG3736 Type IV secretory pathway, component VirB8; cag pathogenicity island protein V 546921 12360341 HPGAM_02710 Helicobacter pylori Gambia94/24 cag pathogenicity island protein V YP_005780265.1 546163 R 907240 CDS YP_005780266.1 385218791 12360342 547301..547957 1 NC_017371.1 cag island protein 547957 12360342 HPGAM_02715 Helicobacter pylori Gambia94/24 cag island protein YP_005780266.1 547301 D 907240 CDS YP_005780267.1 385218792 12360343 547993..548835 1 NC_017371.1 CAG pathogenicity island protein T 548835 12360343 HPGAM_02720 Helicobacter pylori Gambia94/24 CAG pathogenicity island protein T YP_005780267.1 547993 D 907240 CDS YP_005780268.1 385218793 12360344 complement(549037..549630) 1 NC_017371.1 CAG pathogenicity island protein S 549630 12360344 HPGAM_02725 Helicobacter pylori Gambia94/24 CAG pathogenicity island protein S YP_005780268.1 549037 R 907240 CDS YP_005780269.1 385218794 12360345 complement(549803..549922) 1 NC_017371.1 hypothetical protein 549922 12360345 HPGAM_02730 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780269.1 549803 R 907240 CDS YP_005780270.1 385218795 12360346 551828..552958 1 NC_017371.1 cag island protein 552958 12360346 HPGAM_02735 Helicobacter pylori Gambia94/24 cag island protein YP_005780270.1 551828 D 907240 CDS YP_005780271.1 385218796 12360347 552973..553893 1 NC_017371.1 cag pathogenicity island protein (cagN, cag17) 553893 12360347 HPGAM_02740 Helicobacter pylori Gambia94/24 cag pathogenicity island protein (cagN, cag17) YP_005780271.1 552973 D 907240 CDS YP_005780272.1 385218797 12360348 complement(553975..554688) 1 NC_017371.1 cag pathogenicity island protein L 554688 12360348 HPGAM_02745 Helicobacter pylori Gambia94/24 cag pathogenicity island protein L YP_005780272.1 553975 R 907240 CDS YP_005780273.1 385218798 12360349 complement(554685..555830) 1 NC_017371.1 cag pathogenicity island protein I 555830 12360349 HPGAM_02750 Helicobacter pylori Gambia94/24 cag pathogenicity island protein I YP_005780273.1 554685 R 907240 CDS YP_005780274.1 385218799 12360350 complement(555841..556953) 1 NC_017371.1 COG0249 Mismatch repair ATPase (MutS family); cag island protein 556953 12360350 HPGAM_02755 Helicobacter pylori Gambia94/24 cag island protein YP_005780274.1 555841 R 907240 CDS YP_005780275.1 385218800 12360351 complement(556969..557397) 1 NC_017371.1 cag island protein 557397 12360351 HPGAM_02760 Helicobacter pylori Gambia94/24 cag island protein YP_005780275.1 556969 R 907240 CDS YP_005780276.1 385218801 12360352 complement(557452..558258) 1 NC_017371.1 cag island protein 558258 12360352 HPGAM_02765 Helicobacter pylori Gambia94/24 cag island protein YP_005780276.1 557452 R 907240 CDS YP_005780277.1 385218802 12360353 complement(558260..561211) 1 NC_017371.1 COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein 561211 12360353 HPGAM_02770 Helicobacter pylori Gambia94/24 DNA transfer protein YP_005780277.1 558260 R 907240 CDS YP_005780278.1 385218803 12360354 complement(561220..561843) 1 NC_017371.1 cag pathogenicity island protein D 561843 12360354 HPGAM_02775 Helicobacter pylori Gambia94/24 cag pathogenicity island protein D YP_005780278.1 561220 R 907240 CDS YP_005780279.1 385218804 12360355 complement(561845..562192) 1 NC_017371.1 cag pathogenicity island protein (cagC, cag25) 562192 12360355 HPGAM_02780 Helicobacter pylori Gambia94/24 cag pathogenicity island protein (cagC, cag25) YP_005780279.1 561845 R 907240 CDS YP_005780280.1 385218805 12360356 complement(562335..562562) 1 NC_017371.1 cag pathogenicity island protein B 562562 12360356 HPGAM_02785 Helicobacter pylori Gambia94/24 cag pathogenicity island protein B YP_005780280.1 562335 R 907240 CDS YP_005780281.1 385218806 12360357 complement(562594..562740) 1 NC_017371.1 hypothetical protein 562740 12360357 HPGAM_02790 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780281.1 562594 R 907240 CDS YP_005780282.1 385218807 12360358 563007..566693 1 NC_017371.1 COG0419 ATPase involved in DNA repair; cytotoxin-associated protein A 566693 12360358 HPGAM_02795 Helicobacter pylori Gambia94/24 cytotoxin-associated protein A YP_005780282.1 563007 D 907240 CDS YP_005780283.1 385218808 12360359 566789..566920 1 NC_017371.1 hypothetical protein 566920 12360359 HPGAM_02800 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780283.1 566789 D 907240 CDS YP_005780284.1 385218809 12360360 567070..567333 1 NC_017371.1 COG1112 Superfamily I DNA and RNA helicases and helicase subunits; regulator of nonsense transcripts 1 567333 12360360 HPGAM_02805 Helicobacter pylori Gambia94/24 regulator of nonsense transcripts 1 YP_005780284.1 567070 D 907240 CDS YP_005780285.1 385218810 12360361 complement(567496..568263) 1 NC_017371.1 COG0796 Glutamate racemase; glutamate racemase 568263 12360361 HPGAM_02810 Helicobacter pylori Gambia94/24 glutamate racemase YP_005780285.1 567496 R 907240 CDS YP_005780286.1 385218811 12360362 complement(568303..569619) 1 NC_017371.1 COG1158 Transcription termination factor; transcription termination factor Rho 569619 rho 12360362 rho Helicobacter pylori Gambia94/24 transcription termination factor Rho YP_005780286.1 568303 R 907240 CDS YP_005780287.1 385218812 12360363 569884..570087 1 NC_017371.1 COG0254 Ribosomal protein L31; 50S ribosomal protein L31 570087 rpmE 12360363 rpmE Helicobacter pylori Gambia94/24 50S ribosomal protein L31 YP_005780287.1 569884 D 907240 CDS YP_005780288.1 385218813 12360364 570994..571677 1 NC_017371.1 COG0566 rRNA methylases; RNA methyltransferase 571677 12360364 HPGAM_02835 Helicobacter pylori Gambia94/24 RNA methyltransferase YP_005780288.1 570994 D 907240 CDS YP_005780289.1 385218814 12360365 571690..572655 1 NC_017371.1 hypothetical protein 572655 12360365 HPGAM_02840 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780289.1 571690 D 907240 CDS YP_005780290.1 385218815 12360366 572652..573473 1 NC_017371.1 COG1217 Predicted membrane GTPase involved in stress response; hypothetical protein 573473 12360366 HPGAM_02845 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780290.1 572652 D 907240 CDS YP_005780291.1 385218816 12360367 complement(573544..573981) 1 NC_017371.1 hypothetical protein 573981 12360367 HPGAM_02850 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780291.1 573544 R 907240 CDS YP_005780292.1 385218817 12360368 574241..574384 1 NC_017371.1 hypothetical protein 574384 12360368 HPGAM_02855 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780292.1 574241 D 907240 CDS YP_005780293.1 385218818 12360369 complement(574458..575396) 1 NC_017371.1 COG0825 Acetyl-CoA carboxylase alpha subunit; acetyl-CoA carboxylase carboxyltransferase subunit alpha 575396 12360369 HPGAM_02860 Helicobacter pylori Gambia94/24 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_005780293.1 574458 R 907240 CDS YP_005780294.1 385218819 12360370 complement(575418..576656) 1 NC_017371.1 COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; 3-oxoacyl-(acyl carrier protein) synthase II 576656 12360370 HPGAM_02865 Helicobacter pylori Gambia94/24 3-oxoacyl-(acyl carrier protein) synthase II YP_005780294.1 575418 R 907240 CDS YP_005780295.1 385218820 12360371 complement(576761..576997) 1 NC_017371.1 COG0236 Acyl carrier protein; acyl carrier protein 576997 acpP 12360371 acpP Helicobacter pylori Gambia94/24 acyl carrier protein YP_005780295.1 576761 R 907240 CDS YP_005780296.1 385218821 12360372 complement(577222..577965) 1 NC_017371.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); 3-ketoacyl-ACP reductase 577965 fabG 12360372 fabG Helicobacter pylori Gambia94/24 3-ketoacyl-ACP reductase YP_005780296.1 577222 R 907240 CDS YP_005780297.1 385218822 12360373 complement(578004..578216) 1 NC_017371.1 COG0828 Ribosomal protein S21; 30S ribosomal protein S21 578216 rpsU 12360373 rpsU Helicobacter pylori Gambia94/24 30S ribosomal protein S21 YP_005780297.1 578004 R 907240 CDS YP_005780298.1 385218823 12360374 complement(578317..579567) 1 NC_017371.1 hypothetical protein 579567 12360374 HPGAM_02885 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780298.1 578317 R 907240 CDS YP_005780299.1 385218824 12360375 579452..579658 1 NC_017371.1 hypothetical protein 579658 12360375 HPGAM_02890 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780299.1 579452 D 907240 CDS YP_005780300.1 385218825 12360376 579741..579986 1 NC_017371.1 hypothetical protein 579986 12360376 HPGAM_02895 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780300.1 579741 D 907240 CDS YP_005780301.1 385218826 12360377 complement(580014..580661) 1 NC_017371.1 COG3059 Predicted membrane protein; hypothetical protein 580661 12360377 HPGAM_02900 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780301.1 580014 R 907240 CDS YP_005780302.1 385218827 12360378 complement(580774..581592) 1 NC_017371.1 COG0253 Diaminopimelate epimerase; diaminopimelate epimerase 581592 dapF 12360378 dapF Helicobacter pylori Gambia94/24 diaminopimelate epimerase YP_005780302.1 580774 R 907240 CDS YP_005780303.1 385218828 12360379 581707..582756 1 NC_017371.1 COG0628 Predicted permease; hypothetical protein 582756 12360379 HPGAM_02910 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780303.1 581707 D 907240 CDS YP_005780304.1 385218829 12360380 582750..582875 1 NC_017371.1 hypothetical protein 582875 12360380 HPGAM_02915 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780304.1 582750 D 907240 CDS YP_005780305.1 385218830 12360381 583123..583245 1 NC_017371.1 hypothetical protein 583245 12360381 HPGAM_02920 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780305.1 583123 D 907240 CDS YP_005780306.1 385218831 12360382 complement(583461..584333) 1 NC_017371.1 COG0535 Predicted Fe-S oxidoreductases; hypothetical protein 584333 12360382 HPGAM_02925 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780306.1 583461 R 907240 CDS YP_005780307.1 385218832 12360383 complement(584348..585448) 1 NC_017371.1 COG0012 Predicted GTPase, probable translation factor; GTP-binding protein YchF 585448 12360383 HPGAM_02930 Helicobacter pylori Gambia94/24 GTP-binding protein YchF YP_005780307.1 584348 R 907240 CDS YP_005780308.1 385218833 12360384 complement(585450..586940) 1 NC_017371.1 COG0260 Leucyl aminopeptidase; multifunctional aminopeptidase A 586940 12360384 HPGAM_02935 Helicobacter pylori Gambia94/24 multifunctional aminopeptidase A YP_005780308.1 585450 R 907240 CDS YP_005780309.1 385218834 12360385 complement(586988..587566) 1 NC_017371.1 COG0586 Uncharacterized membrane-associated protein; hypothetical protein 587566 12360385 HPGAM_02940 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780309.1 586988 R 907240 CDS YP_005780310.1 385218835 12360386 complement(587581..588120) 1 NC_017371.1 COG0503 Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins; adenine phosphoribosyltransferase 588120 12360386 HPGAM_02945 Helicobacter pylori Gambia94/24 adenine phosphoribosyltransferase YP_005780310.1 587581 R 907240 CDS YP_005780311.1 385218836 12360387 complement(588178..588510) 1 NC_017371.1 hypothetical protein 588510 12360387 HPGAM_02950 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780311.1 588178 R 907240 CDS YP_005780312.1 385218837 12360388 complement(588561..589016) 1 NC_017371.1 COG0698 Ribose 5-phosphate isomerase RpiB; ribose-5-phosphate isomerase B 589016 12360388 HPGAM_02955 Helicobacter pylori Gambia94/24 ribose-5-phosphate isomerase B YP_005780312.1 588561 R 907240 CDS YP_005780313.1 385218838 12360389 complement(589037..589735) 1 NC_017371.1 COG1994 Zn-dependent proteases; hypothetical protein 589735 12360389 HPGAM_02960 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780313.1 589037 R 907240 CDS YP_005780314.1 385218839 12360390 complement(589744..590616) 1 NC_017371.1 COG0681 Signal peptidase I; signal peptidase I 590616 12360390 HPGAM_02965 Helicobacter pylori Gambia94/24 signal peptidase I YP_005780314.1 589744 R 907240 CDS YP_005780315.1 385218840 12360391 complement(590617..591489) 1 NC_017371.1 COG0190 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 591489 12360391 HPGAM_02970 Helicobacter pylori Gambia94/24 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_005780315.1 590617 R 907240 CDS YP_005780316.1 385218841 12360392 complement(591574..593625) 1 NC_017371.1 COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily; hypothetical protein 593625 12360392 HPGAM_02975 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780316.1 591574 R 907240 CDS YP_005780317.1 385218842 12360393 complement(593631..594185) 1 NC_017371.1 hypothetical protein 594185 12360393 HPGAM_02980 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780317.1 593631 R 907240 CDS YP_005780318.1 385218843 12360394 complement(594192..595214) 1 NC_017371.1 COG4692 Predicted neuraminidase (sialidase); hypothetical protein 595214 12360394 HPGAM_02985 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780318.1 594192 R 907240 CDS YP_005780319.1 385218844 12360395 complement(595287..596306) 1 NC_017371.1 COG0418 Dihydroorotase; dihydroorotase 596306 12360395 HPGAM_02990 Helicobacter pylori Gambia94/24 dihydroorotase YP_005780319.1 595287 R 907240 CDS YP_005780320.1 385218845 12360396 complement(596311..597264) 1 NC_017371.1 COG0810 Periplasmic protein TonB, links inner and outer membranes; hypothetical protein 597264 12360396 HPGAM_02995 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780320.1 596311 R 907240 CDS YP_005780321.1 385218846 12360397 complement(597248..598114) 1 NC_017371.1 hypothetical protein 598114 12360397 HPGAM_03000 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780321.1 597248 R 907240 CDS YP_005780322.1 385218847 12360398 complement(598126..598497) 1 NC_017371.1 COG1886 Flagellar motor switch/type III secretory pathway protein; flagellar motor switch protein 598497 12360398 HPGAM_03005 Helicobacter pylori Gambia94/24 flagellar motor switch protein YP_005780322.1 598126 R 907240 CDS YP_005780323.1 385218848 12360399 complement(598579..599223) 1 NC_017371.1 COG0177 Predicted EndoIII-related endonuclease; endonuclease III 599223 12360399 HPGAM_03010 Helicobacter pylori Gambia94/24 endonuclease III YP_005780323.1 598579 R 907240 CDS YP_005780324.1 385218849 12360400 complement(599220..599456) 1 NC_017371.1 COG1918 Fe2+ transport system protein A; ferrous iron transport protein A 599456 12360400 HPGAM_03015 Helicobacter pylori Gambia94/24 ferrous iron transport protein A YP_005780324.1 599220 R 907240 CDS YP_005780325.1 385218850 12360401 complement(599453..602392) 1 NC_017371.1 hypothetical protein 602392 12360401 HPGAM_03020 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780325.1 599453 R 907240 CDS YP_005780326.1 385218851 12360402 602310..603299 1 NC_017371.1 COG1559 Predicted periplasmic solute-binding protein; hypothetical protein 603299 12360402 HPGAM_03025 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780326.1 602310 D 907240 CDS YP_005780327.1 385218852 12360403 603484..603825 1 NC_017371.1 COG1146 Ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 603825 oorD 12360403 oorD Helicobacter pylori Gambia94/24 2-oxoglutarate-acceptor oxidoreductase subunit OorD YP_005780327.1 603484 D 907240 CDS YP_005780328.1 385218853 12360404 603825..604952 1 NC_017371.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 604952 oorA 12360404 oorA Helicobacter pylori Gambia94/24 2-oxoglutarate-acceptor oxidoreductase subunit OorA YP_005780328.1 603825 D 907240 CDS YP_005780329.1 385218854 12360405 604954..605775 1 NC_017371.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 605775 oorB 12360405 oorB Helicobacter pylori Gambia94/24 2-oxoglutarate-acceptor oxidoreductase subunit OorB YP_005780329.1 604954 D 907240 CDS YP_005780330.1 385218855 12360406 605775..606329 1 NC_017371.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 606329 oorC 12360406 oorC Helicobacter pylori Gambia94/24 2-oxoglutarate-acceptor oxidoreductase subunit OorC YP_005780330.1 605775 D 907240 CDS YP_005780331.1 385218856 12360407 606441..608216 1 NC_017371.1 COG5610 Predicted hydrolase (HAD superfamily); hypothetical protein 608216 12360407 HPGAM_03050 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780331.1 606441 D 907240 CDS YP_005780332.1 385218857 12360408 608374..608538 1 NC_017371.1 hypothetical protein 608538 12360408 HPGAM_03055 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780332.1 608374 D 907240 CDS YP_005780333.1 385218858 12360409 608548..610020 1 NC_017371.1 COG1495 Disulfide bond formation protein DsbB; hypothetical protein 610020 12360409 HPGAM_03060 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780333.1 608548 D 907240 CDS YP_005780334.1 385218859 12360410 610495..611073 1 NC_017371.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; tumor necrosis factor alpha-inducing protein 611073 12360410 HPGAM_03065 Helicobacter pylori Gambia94/24 tumor necrosis factor alpha-inducing protein YP_005780334.1 610495 D 907240 CDS YP_005780335.1 385218860 12360411 complement(611076..613058) 1 NC_017371.1 COG0744 Membrane carboxypeptidase (penicillin-binding protein); penicillin-binding protein 613058 12360411 HPGAM_03070 Helicobacter pylori Gambia94/24 penicillin-binding protein YP_005780335.1 611076 R 907240 CDS YP_005780336.1 385218861 12360412 complement(613058..614179) 1 NC_017371.1 COG0156 7-keto-8-aminopelargonate synthetase and related enzymes; 8-amino-7-oxononanoate synthase 614179 12360412 HPGAM_03075 Helicobacter pylori Gambia94/24 8-amino-7-oxononanoate synthase YP_005780336.1 613058 R 907240 CDS YP_005780337.1 385218862 12360413 complement(614202..615503) 1 NC_017371.1 COG0840 Methyl-accepting chemotaxis protein; methyl-accepting chemotaxis protein (MCP) 615503 12360413 HPGAM_03080 Helicobacter pylori Gambia94/24 methyl-accepting chemotaxis protein (MCP) YP_005780337.1 614202 R 907240 CDS YP_005780338.1 385218863 12360414 complement(616159..616521) 1 NC_017371.1 hypothetical protein 616521 12360414 HPGAM_03095 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780338.1 616159 R 907240 CDS YP_005780339.1 385218864 12360415 616732..618264 1 NC_017371.1 COG1344 Flagellin and related hook-associated proteins; flagellin A 618264 12360415 HPGAM_03100 Helicobacter pylori Gambia94/24 flagellin A YP_005780339.1 616732 D 907240 CDS YP_005780340.1 385218865 12360416 618382..619038 1 NC_017371.1 COG2231 Uncharacterized protein related to Endonuclease III; 3-methyladenine DNA glycosylase 619038 12360416 HPGAM_03105 Helicobacter pylori Gambia94/24 3-methyladenine DNA glycosylase YP_005780340.1 618382 D 907240 CDS YP_005780341.1 385218866 12360417 619035..619652 1 NC_017371.1 hypothetical protein 619652 12360417 HPGAM_03110 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780341.1 619035 D 907240 CDS YP_005780342.1 385218867 12360418 619721..620740 1 NC_017371.1 COG0407 Uroporphyrinogen-III decarboxylase; uroporphyrinogen decarboxylase 620740 hemE 12360418 hemE Helicobacter pylori Gambia94/24 uroporphyrinogen decarboxylase YP_005780342.1 619721 D 907240 CDS YP_005780343.1 385218868 12360419 620750..622183 1 NC_017371.1 COG1538 Outer membrane protein; outer-membrane protein of the hefABC efflux system 622183 12360419 HPGAM_03120 Helicobacter pylori Gambia94/24 outer-membrane protein of the hefABC efflux system YP_005780343.1 620750 D 907240 CDS YP_005780344.1 385218869 12360420 622194..622898 1 NC_017371.1 COG0845 Membrane-fusion protein; hypothetical protein 622898 12360420 HPGAM_03125 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780344.1 622194 D 907240 CDS YP_005780345.1 385218870 12360421 622911..625997 1 NC_017371.1 COG0841 Cation/multidrug efflux pump; putative efflux transporter 625997 12360421 HPGAM_03130 Helicobacter pylori Gambia94/24 putative efflux transporter YP_005780345.1 622911 D 907240 CDS YP_005780346.1 385218871 12360422 625994..626563 1 NC_017371.1 COG0015 Adenylosuccinate lyase; hypothetical protein 626563 12360422 HPGAM_03135 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780346.1 625994 D 907240 CDS YP_005780347.1 385218872 12360423 626727..636314 1 NC_017371.1 putative vacuolating cytotoxin (VacA)-like protein 636314 12360423 HPGAM_03140 Helicobacter pylori Gambia94/24 putative vacuolating cytotoxin (VacA)-like protein YP_005780347.1 626727 D 907240 CDS YP_005780348.1 385218873 12360424 complement(636379..636888) 1 NC_017371.1 COG0842 ABC-type multidrug transport system, permease component; putative ABC transporter permease 636888 12360424 HPGAM_03145 Helicobacter pylori Gambia94/24 putative ABC transporter permease YP_005780348.1 636379 R 907240 CDS YP_005780349.1 385218874 12360425 complement(636896..637135) 1 NC_017371.1 COG0842 ABC-type multidrug transport system, permease component; ABC transporter permease 637135 12360425 HPGAM_03150 Helicobacter pylori Gambia94/24 ABC transporter permease YP_005780349.1 636896 R 907240 CDS YP_005780350.1 385218875 12360426 complement(637135..637836) 1 NC_017371.1 COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein 637836 12360426 HPGAM_03155 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780350.1 637135 R 907240 CDS YP_005780351.1 385218876 12360427 complement(638163..638495) 1 NC_017371.1 hypothetical protein 638495 12360427 HPGAM_03160 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780351.1 638163 R 907240 CDS YP_005780352.1 385218877 12360428 complement(638620..640590) 1 NC_017371.1 COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); NAD-dependent DNA ligase LigA 640590 ligA 12360428 ligA Helicobacter pylori Gambia94/24 NAD-dependent DNA ligase LigA YP_005780352.1 638620 R 907240 CDS YP_005780353.1 385218878 12360429 640662..641603 1 NC_017371.1 COG0835 Chemotaxis signal transduction protein; Chemotaxis protein 641603 12360429 HPGAM_03170 Helicobacter pylori Gambia94/24 Chemotaxis protein YP_005780353.1 640662 D 907240 CDS YP_005780354.1 385218879 12360430 641638..643377 1 NC_017371.1 COG0173 Aspartyl-tRNA synthetase; aspartyl-tRNA synthetase 643377 aspS 12360430 aspS Helicobacter pylori Gambia94/24 aspartyl-tRNA synthetase YP_005780354.1 641638 D 907240 CDS YP_005780355.1 385218880 12360431 643389..643964 1 NC_017371.1 COG0563 Adenylate kinase and related kinases; adenylate kinase 643964 adk 12360431 adk Helicobacter pylori Gambia94/24 adenylate kinase YP_005780355.1 643389 D 907240 CDS YP_005780356.1 385218881 12360432 643989..644987 1 NC_017371.1 COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 644987 12360432 HPGAM_03185 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005780356.1 643989 D 907240 CDS YP_005780357.1 385218882 12360433 645045..646382 1 NC_017371.1 COG3306 Glycosyltransferase involved in LPS biosynthesis; family 25 glycosyl transferase 646382 12360433 HPGAM_03190 Helicobacter pylori Gambia94/24 family 25 glycosyl transferase YP_005780357.1 645045 D 907240 CDS YP_005780358.1 385218883 12360434 646434..646955 1 NC_017371.1 COG0221 Inorganic pyrophosphatase; inorganic pyrophosphatase 646955 12360434 HPGAM_03195 Helicobacter pylori Gambia94/24 inorganic pyrophosphatase YP_005780358.1 646434 D 907240 CDS YP_005780359.1 385218884 12360435 complement(647093..649333) 1 NC_017371.1 COG1193 Mismatch repair ATPase (MutS family); recombination and DNA strand exchange inhibitor protein 649333 12360435 HPGAM_03200 Helicobacter pylori Gambia94/24 recombination and DNA strand exchange inhibitor protein YP_005780359.1 647093 R 907240 CDS YP_005780360.1 385218885 12360436 complement(649349..649711) 1 NC_017371.1 hypothetical protein 649711 12360436 HPGAM_03205 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780360.1 649349 R 907240 CDS YP_005780361.1 385218886 12360437 complement(649711..651060) 1 NC_017371.1 COG0773 UDP-N-acetylmuramate-alanine ligase; UDP-N-acetylmuramate--L-alanine ligase 651060 murC 12360437 murC Helicobacter pylori Gambia94/24 UDP-N-acetylmuramate--L-alanine ligase YP_005780361.1 649711 R 907240 CDS YP_005780362.1 385218887 12360438 complement(651053..652180) 1 NC_017371.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; hypothetical protein 652180 12360438 HPGAM_03215 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780362.1 651053 R 907240 CDS YP_005780363.1 385218888 12360439 652333..653412 1 NC_017371.1 COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 653412 ispG 12360439 ispG Helicobacter pylori Gambia94/24 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_005780363.1 652333 D 907240 CDS YP_005780364.1 385218889 12360440 653415..654620 1 NC_017371.1 COG2171 Tetrahydrodipicolinate N-succinyltransferase; tetrahydrodipicolinate N-succinyltransferase 654620 12360440 HPGAM_03225 Helicobacter pylori Gambia94/24 tetrahydrodipicolinate N-succinyltransferase YP_005780364.1 653415 D 907240 CDS YP_005780365.1 385218890 12360441 654632..655690 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 655690 12360441 HPGAM_03230 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780365.1 654632 D 907240 CDS YP_005780366.1 385218891 12360442 655928..657973 1 NC_017371.1 COG1479 Uncharacterized conserved protein; hypothetical protein 657973 12360442 HPGAM_03235 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780366.1 655928 D 907240 CDS YP_005780367.1 385218892 12360443 complement(658022..658606) 1 NC_017371.1 COG2249 Putative NADPH-quinone reductase (modulator of drug activity B); hypothetical protein 658606 12360443 HPGAM_03240 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780367.1 658022 R 907240 CDS YP_005780368.1 385218893 12360444 658765..659916 1 NC_017371.1 COG1740 Ni,Fe-hydrogenase I small subunit; hydrogenase (NiFe) small subunit HydA 659916 12360444 HPGAM_03245 Helicobacter pylori Gambia94/24 hydrogenase (NiFe) small subunit HydA YP_005780368.1 658765 D 907240 CDS YP_005780369.1 385218894 12360445 659929..661665 1 NC_017371.1 COG0374 Ni,Fe-hydrogenase I large subunit; nickel-dependent hydrogenase, large subunit 661665 12360445 HPGAM_03250 Helicobacter pylori Gambia94/24 nickel-dependent hydrogenase, large subunit YP_005780369.1 659929 D 907240 CDS YP_005780370.1 385218895 12360446 661678..662352 1 NC_017371.1 COG1969 Ni,Fe-hydrogenase I cytochrome b subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 662352 12360446 HPGAM_03255 Helicobacter pylori Gambia94/24 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_005780370.1 661678 D 907240 CDS YP_005780371.1 385218896 12360447 662349..662885 1 NC_017371.1 COG0680 Ni,Fe-hydrogenase maturation factor; hydrogenase expression/formation protein 662885 12360447 HPGAM_03260 Helicobacter pylori Gambia94/24 hydrogenase expression/formation protein YP_005780371.1 662349 D 907240 CDS YP_005780372.1 385218897 12360448 662887..664425 1 NC_017371.1 hypothetical protein 664425 12360448 HPGAM_03265 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780372.1 662887 D 907240 CDS YP_005780373.1 385218898 12360449 complement(664430..664843) 1 NC_017371.1 hypothetical protein 664843 12360449 HPGAM_03270 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780373.1 664430 R 907240 CDS YP_005780374.1 385218899 12360450 complement(664962..665414) 1 NC_017371.1 hypothetical protein 665414 12360450 HPGAM_03275 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780374.1 664962 R 907240 CDS YP_005780375.1 385218900 12360451 665595..666521 1 NC_017371.1 putative Outer membrane protein 666521 12360451 HPGAM_03280 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780375.1 665595 D 907240 CDS YP_005780376.1 385218901 12360452 complement(666760..667437) 1 NC_017371.1 COG0603 Predicted PP-loop superfamily ATPase; hypothetical protein 667437 12360452 HPGAM_03285 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780376.1 666760 R 907240 CDS YP_005780377.1 385218902 12360453 667500..668714 1 NC_017371.1 COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; polynucleotide adenylyltransferase 668714 12360453 HPGAM_03290 Helicobacter pylori Gambia94/24 polynucleotide adenylyltransferase YP_005780377.1 667500 D 907240 CDS YP_005780378.1 385218903 12360454 668736..669230 1 NC_017371.1 hypothetical protein 669230 12360454 HPGAM_03295 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780378.1 668736 D 907240 CDS YP_005780379.1 385218904 12360455 669245..670102 1 NC_017371.1 COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases; 3-hydroxyacid dehydrogenase 670102 12360455 HPGAM_03300 Helicobacter pylori Gambia94/24 3-hydroxyacid dehydrogenase YP_005780379.1 669245 D 907240 CDS YP_005780380.1 385218905 12360456 complement(670819..671028) 1 NC_017371.1 hypothetical protein 671028 12360456 HPGAM_03315 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780380.1 670819 R 907240 CDS YP_005780381.1 385218906 12360457 671088..672407 1 NC_017371.1 COG0008 Glutamyl- and glutaminyl-tRNA synthetases; glutamylglutaminyl-tRNA synthetase 672407 12360457 HPGAM_03320 Helicobacter pylori Gambia94/24 glutamylglutaminyl-tRNA synthetase YP_005780381.1 671088 D 907240 CDS YP_005780382.1 385218907 12360458 672404..672697 1 NC_017371.1 COG0762 Predicted integral membrane protein; hypothetical protein 672697 12360458 HPGAM_03325 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780382.1 672404 D 907240 CDS YP_005780383.1 385218908 12360459 672706..674388 1 NC_017371.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); lytic murein transglycosylase 674388 12360459 HPGAM_03330 Helicobacter pylori Gambia94/24 lytic murein transglycosylase YP_005780383.1 672706 D 907240 CDS YP_005780384.1 385218909 12360460 674385..675206 1 NC_017371.1 COG1210 UDP-glucose pyrophosphorylase; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 675206 12360460 HPGAM_03335 Helicobacter pylori Gambia94/24 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_005780384.1 674385 D 907240 CDS YP_005780385.1 385218910 12360461 675218..675625 1 NC_017371.1 hypothetical protein 675625 12360461 HPGAM_03340 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780385.1 675218 D 907240 CDS YP_005780386.1 385218911 12360462 675628..676896 1 NC_017371.1 COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 676896 12360462 HPGAM_03345 Helicobacter pylori Gambia94/24 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005780386.1 675628 D 907240 CDS YP_005780387.1 385218912 12360463 676953..678359 1 NC_017371.1 COG1027 Aspartate ammonia-lyase; aspartate ammonia-lyase 678359 aspA 12360463 aspA Helicobacter pylori Gambia94/24 aspartate ammonia-lyase YP_005780387.1 676953 D 907240 CDS YP_005780388.1 385218913 12360464 678404..678994 1 NC_017371.1 COG1573 Uracil-DNA glycosylase; hypothetical protein 678994 12360464 HPGAM_03355 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780388.1 678404 D 907240 CDS YP_005780389.1 385218914 12360465 complement(679003..680370) 1 NC_017371.1 Alpha1, 3-fucosyltransferase 680370 12360465 HPGAM_03360 Helicobacter pylori Gambia94/24 Alpha1, 3-fucosyltransferase YP_005780389.1 679003 R 907240 CDS YP_005780390.1 385218915 12360466 complement(680409..681032) 1 NC_017371.1 COG0560 Phosphoserine phosphatase; phosphoserine phosphatase 681032 12360466 HPGAM_03365 Helicobacter pylori Gambia94/24 phosphoserine phosphatase YP_005780390.1 680409 R 907240 CDS YP_005780391.1 385218916 12360467 complement(681047..681550) 1 NC_017371.1 COG1528 Ferritin-like protein; ferritin 681550 12360467 HPGAM_03370 Helicobacter pylori Gambia94/24 ferritin YP_005780391.1 681047 R 907240 CDS YP_005780392.1 385218917 12360468 681860..682942 1 NC_017371.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 682942 12360468 HPGAM_03375 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780392.1 681860 D 907240 CDS YP_005780393.1 385218918 12360469 685763..686824 1 NC_017371.1 COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes; hypothetical protein 686824 12360469 HPGAM_03390 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780393.1 685763 D 907240 CDS YP_005780394.1 385218919 12360470 686830..688128 1 NC_017371.1 COG0612 Predicted Zn-dependent peptidases; processing protease 688128 12360470 HPGAM_03395 Helicobacter pylori Gambia94/24 processing protease YP_005780394.1 686830 D 907240 CDS YP_005780395.1 385218920 12360471 complement(688097..688237) 1 NC_017371.1 hypothetical protein 688237 12360471 HPGAM_03400 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780395.1 688097 R 907240 CDS YP_005780396.1 385218921 12360472 688125..689552 1 NC_017371.1 COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); aspartyl/glutamyl-tRNA amidotransferase subunit B 689552 gatB 12360472 gatB Helicobacter pylori Gambia94/24 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_005780396.1 688125 D 907240 CDS YP_005780397.1 385218922 12360473 689552..690799 1 NC_017371.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 690799 12360473 HPGAM_03410 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780397.1 689552 D 907240 CDS YP_005780398.1 385218923 12360474 690809..691816 1 NC_017371.1 COG2956 Predicted N-acetylglucosaminyl transferase; hypothetical protein 691816 12360474 HPGAM_03415 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780398.1 690809 D 907240 CDS YP_005780399.1 385218924 12360475 691818..692249 1 NC_017371.1 COG0328 Ribonuclease HI; ribonuclease H 692249 rnhA 12360475 rnhA Helicobacter pylori Gambia94/24 ribonuclease H YP_005780399.1 691818 D 907240 CDS YP_005780400.1 385218925 12360476 692261..692980 1 NC_017371.1 COG0571 dsRNA-specific ribonuclease; ribonuclease III 692980 rnc 12360476 rnc Helicobacter pylori Gambia94/24 ribonuclease III YP_005780400.1 692261 D 907240 CDS YP_005780401.1 385218926 12360477 692977..694074 1 NC_017371.1 COG0082 Chorismate synthase; chorismate synthase 694074 12360477 HPGAM_03430 Helicobacter pylori Gambia94/24 chorismate synthase YP_005780401.1 692977 D 907240 CDS YP_005780402.1 385218927 12360478 694112..694627 1 NC_017371.1 hypothetical protein 694627 12360478 HPGAM_03435 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780402.1 694112 D 907240 CDS YP_005780403.1 385218928 12360479 694627..696000 1 NC_017371.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 696000 12360479 HPGAM_03440 Helicobacter pylori Gambia94/24 coproporphyrinogen III oxidase YP_005780403.1 694627 D 907240 CDS YP_005780404.1 385218929 12360480 695997..697298 1 NC_017371.1 COG0247 Fe-S oxidoreductase; putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) 697298 12360480 HPGAM_03445 Helicobacter pylori Gambia94/24 putative anaerobic glycerol-3-phosphate dehydrogenase (G-3-P dehydrogenase) YP_005780404.1 695997 D 907240 CDS YP_005780405.1 385218930 12360481 697375..698907 1 NC_017371.1 COG4889 Predicted helicase; type II R-M system protein 698907 12360481 HPGAM_03450 Helicobacter pylori Gambia94/24 type II R-M system protein YP_005780405.1 697375 D 907240 CDS YP_005780406.1 385218931 12360482 698843..702439 1 NC_017371.1 COG4889 Predicted helicase; hypothetical protein 702439 12360482 HPGAM_03455 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780406.1 698843 D 907240 CDS YP_005780407.1 385218932 12360483 702436..704919 1 NC_017371.1 COG0846 NAD-dependent protein deacetylases, SIR2 family; hypothetical protein 704919 12360483 HPGAM_03460 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780407.1 702436 D 907240 CDS YP_005780408.1 385218933 12360484 704938..705045 1 NC_017371.1 hypothetical protein 705045 12360484 HPGAM_03465 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780408.1 704938 D 907240 CDS YP_005780409.1 385218934 12360485 705140..705952 1 NC_017371.1 putative Outer membrane protein 705952 12360485 HPGAM_03470 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780409.1 705140 D 907240 CDS YP_005780410.1 385218935 12360486 706112..707284 1 NC_017371.1 COG0436 Aspartate/tyrosine/aromatic aminotransferase; aspartate aminotransferase 707284 12360486 HPGAM_03475 Helicobacter pylori Gambia94/24 aspartate aminotransferase YP_005780410.1 706112 D 907240 CDS YP_005780411.1 385218936 12360487 707563..708633 1 NC_017371.1 COG0582 Integrase; phage integrase family site specific recombinase 708633 12360487 HPGAM_03480 Helicobacter pylori Gambia94/24 phage integrase family site specific recombinase YP_005780411.1 707563 D 907240 CDS YP_005780412.1 385218937 12360488 complement(708696..709202) 1 NC_017371.1 COG0350 Methylated DNA-protein cysteine methyltransferase; methylated-DNA--protein-cysteine methyltransferase 709202 12360488 HPGAM_03485 Helicobacter pylori Gambia94/24 methylated-DNA--protein-cysteine methyltransferase YP_005780412.1 708696 R 907240 CDS YP_005780413.1 385218938 12360489 complement(709202..709969) 1 NC_017371.1 COG0730 Predicted permeases; hypothetical protein 709969 12360489 HPGAM_03490 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780413.1 709202 R 907240 CDS YP_005780414.1 385218939 12360490 complement(710080..711027) 1 NC_017371.1 COG0673 Predicted dehydrogenases and related proteins; putative lipopolysaccharide biosynthesis protein 711027 12360490 HPGAM_03495 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005780414.1 710080 R 907240 CDS YP_005780415.1 385218940 12360491 complement(711089..713455) 1 NC_017371.1 COG0209 Ribonucleotide reductase, alpha subunit; ribonucleotide-diphosphate reductase subunit alpha 713455 12360491 HPGAM_03500 Helicobacter pylori Gambia94/24 ribonucleotide-diphosphate reductase subunit alpha YP_005780415.1 711089 R 907240 CDS YP_005780416.1 385218941 12360492 complement(713655..714119) 1 NC_017371.1 hypothetical protein 714119 12360492 HPGAM_03505 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780416.1 713655 R 907240 CDS YP_005780417.1 385218942 12360493 complement(714143..714478) 1 NC_017371.1 hypothetical protein 714478 12360493 HPGAM_03510 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780417.1 714143 R 907240 CDS YP_005780418.1 385218943 12360494 complement(714700..716001) 1 NC_017371.1 COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 716001 glmU 12360494 glmU Helicobacter pylori Gambia94/24 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_005780418.1 714700 R 907240 CDS YP_005780419.1 385218944 12360495 716098..716844 1 NC_017371.1 COG1338 Flagellar biosynthesis pathway, component FliP; flagellar biosynthesis protein FliP 716844 fliP 12360495 fliP Helicobacter pylori Gambia94/24 flagellar biosynthesis protein FliP YP_005780419.1 716098 D 907240 CDS YP_005780420.1 385218945 12360496 complement(716888..719191) 1 NC_017371.1 COG4772 Outer membrane receptor for Fe3+-dicitrate; iron(III) dicitrate transport protein 719191 12360496 HPGAM_03525 Helicobacter pylori Gambia94/24 iron(III) dicitrate transport protein YP_005780420.1 716888 R 907240 CDS YP_005780421.1 385218946 12360497 complement(719451..721379) 1 NC_017371.1 COG0370 Fe2+ transport system protein B; ferrous iron transport protein B 721379 12360497 HPGAM_03530 Helicobacter pylori Gambia94/24 ferrous iron transport protein B YP_005780421.1 719451 R 907240 CDS YP_005780422.1 385218947 12360498 721518..722330 1 NC_017371.1 COG3298 Predicted 3'-5' exonuclease related to the exonuclease domain of PolB; hypothetical protein 722330 12360498 HPGAM_03535 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780422.1 721518 D 907240 CDS YP_005780423.1 385218948 12360499 complement(724618..725118) 1 NC_017371.1 COG4647 Acetone carboxylase, gamma subunit; hypothetical protein 725118 12360499 HPGAM_03565 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780423.1 724618 R 907240 CDS YP_005780424.1 385218949 12360500 complement(725142..727439) 1 NC_017371.1 COG0146 N-methylhydantoinase B/acetone carboxylase, alpha subunit; N-methylhydantoinase 727439 12360500 HPGAM_03570 Helicobacter pylori Gambia94/24 N-methylhydantoinase YP_005780424.1 725142 R 907240 CDS YP_005780425.1 385218950 12360501 complement(727451..729592) 1 NC_017371.1 COG0145 N-methylhydantoinase A/acetone carboxylase, beta subunit; hydantoin utilization protein A 729592 12360501 HPGAM_03575 Helicobacter pylori Gambia94/24 hydantoin utilization protein A YP_005780425.1 727451 R 907240 CDS YP_005780426.1 385218951 12360502 complement(729828..730838) 1 NC_017371.1 COG3528 Uncharacterized protein conserved in bacteria; putative Outer membrane protein 730838 12360502 HPGAM_03580 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780426.1 729828 R 907240 CDS YP_005780427.1 385218952 12360503 complement(730966..732330) 1 NC_017371.1 COG2031 Short chain fatty acids transporter; short-chain fatty acids transporter 732330 12360503 HPGAM_03585 Helicobacter pylori Gambia94/24 short-chain fatty acids transporter YP_005780427.1 730966 R 907240 CDS YP_005780428.1 385218953 12360504 complement(732350..732973) 1 NC_017371.1 COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit; succinyl-CoA-transferase subunit B 732973 12360504 HPGAM_03590 Helicobacter pylori Gambia94/24 succinyl-CoA-transferase subunit B YP_005780428.1 732350 R 907240 CDS YP_005780429.1 385218954 12360505 complement(732970..733668) 1 NC_017371.1 COG1788 Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit; succinyl-CoA-transferase subunit A 733668 12360505 HPGAM_03595 Helicobacter pylori Gambia94/24 succinyl-CoA-transferase subunit A YP_005780429.1 732970 R 907240 CDS YP_005780430.1 385218955 12360506 complement(733679..734854) 1 NC_017371.1 COG0183 Acetyl-CoA acetyltransferase; acetyl-CoA acetyltransferase 734854 12360506 HPGAM_03600 Helicobacter pylori Gambia94/24 acetyl-CoA acetyltransferase YP_005780430.1 733679 R 907240 CDS YP_005780431.1 385218956 12360507 735136..736164 1 NC_017371.1 hypothetical protein 736164 12360507 HPGAM_03605 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780431.1 735136 D 907240 CDS YP_005780432.1 385218957 12360508 736157..736543 1 NC_017371.1 COG0818 Diacylglycerol kinase; diacylglycerol kinase 736543 12360508 HPGAM_03610 Helicobacter pylori Gambia94/24 diacylglycerol kinase YP_005780432.1 736157 D 907240 CDS YP_005780433.1 385218958 12360509 736559..739045 1 NC_017371.1 COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit; DNA gyrase subunit A 739045 12360509 HPGAM_03615 Helicobacter pylori Gambia94/24 DNA gyrase subunit A YP_005780433.1 736559 D 907240 CDS YP_005780434.1 385218959 12360510 739045..739518 1 NC_017371.1 hypothetical protein 739518 12360510 HPGAM_03620 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780434.1 739045 D 907240 CDS YP_005780435.1 385218960 12360511 739515..740660 1 NC_017371.1 COG2204 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains; putative transcriptional regulator 740660 12360511 HPGAM_03625 Helicobacter pylori Gambia94/24 putative transcriptional regulator YP_005780435.1 739515 D 907240 CDS YP_005780436.1 385218961 12360512 complement(741326..744151) 1 NC_017371.1 COG0178 Excinuclease ATPase subunit; excinuclease ABC subunit A 744151 uvrA 12360512 uvrA Helicobacter pylori Gambia94/24 excinuclease ABC subunit A YP_005780436.1 741326 R 907240 CDS YP_005780437.1 385218962 12360513 744316..745137 1 NC_017371.1 outer membrane protein HopE 745137 12360513 HPGAM_03635 Helicobacter pylori Gambia94/24 outer membrane protein HopE YP_005780437.1 744316 D 907240 CDS YP_005780438.1 385218963 12360514 745310..746236 1 NC_017371.1 COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; 16S rRNA m(4)C1402 methyltranserfase 746236 12360514 HPGAM_03640 Helicobacter pylori Gambia94/24 16S rRNA m(4)C1402 methyltranserfase YP_005780438.1 745310 D 907240 CDS YP_005780439.1 385218964 12360515 746244..746588 1 NC_017371.1 hypothetical protein 746588 12360515 HPGAM_03645 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780439.1 746244 D 907240 CDS YP_005780440.1 385218965 12360516 747039..747941 1 NC_017371.1 COG1912 Uncharacterized conserved protein; hypothetical protein 747941 12360516 HPGAM_03650 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780440.1 747039 D 907240 CDS YP_005780441.1 385218966 12360517 748167..750125 1 NC_017371.1 hypothetical protein 750125 12360517 HPGAM_03655 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780441.1 748167 D 907240 CDS YP_005780442.1 385218967 12360518 750317..751537 1 NC_017371.1 COG1896 Predicted hydrolases of HD superfamily; hypothetical protein 751537 12360518 HPGAM_03660 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780442.1 750317 D 907240 CDS YP_005780443.1 385218968 12360519 complement(752249..753493) 1 NC_017371.1 COG1508 DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog; RNA polymerase factor sigma-54 753493 12360519 HPGAM_03675 Helicobacter pylori Gambia94/24 RNA polymerase factor sigma-54 YP_005780443.1 752249 R 907240 CDS YP_005780444.1 385218969 12360520 complement(753496..754218) 1 NC_017371.1 COG1137 ABC-type (unclassified) transport system, ATPase component; ABC transporter ATP-binding protein 754218 12360520 HPGAM_03680 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780444.1 753496 R 907240 CDS YP_005780445.1 385218970 12360521 complement(754231..754632) 1 NC_017371.1 COG0802 Predicted ATPase or kinase; hypothetical protein 754632 12360521 HPGAM_03685 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780445.1 754231 R 907240 CDS YP_005780446.1 385218971 12360522 complement(754629..756368) 1 NC_017371.1 COG2812 DNA polymerase III, gamma/tau subunits; DNA polymerase III subunits gamma and tau 756368 12360522 HPGAM_03690 Helicobacter pylori Gambia94/24 DNA polymerase III subunits gamma and tau YP_005780446.1 754629 R 907240 CDS YP_005780447.1 385218972 12360523 complement(756437..757069) 1 NC_017371.1 COG1279 Lysine efflux permease; hypothetical protein 757069 12360523 HPGAM_03695 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780447.1 756437 R 907240 CDS YP_005780448.1 385218973 12360524 complement(757147..757269) 1 NC_017371.1 hypothetical protein 757269 12360524 HPGAM_03700 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780448.1 757147 R 907240 CDS YP_005780449.1 385218974 12360525 757331..757753 1 NC_017371.1 hypothetical protein 757753 12360525 HPGAM_03705 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780449.1 757331 D 907240 CDS YP_005780450.1 385218975 12360526 757786..758247 1 NC_017371.1 hypothetical protein 758247 12360526 HPGAM_03710 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780450.1 757786 D 907240 CDS YP_005780451.1 385218976 12360527 758640..760526 1 NC_017371.1 putative Outer membrane protein 760526 12360527 HPGAM_03715 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780451.1 758640 D 907240 CDS YP_005780452.1 385218977 12360528 complement(760603..761934) 1 NC_017371.1 COG2704 Anaerobic C4-dicarboxylate transporter; anaerobic C4-dicarboxylate transporter 761934 12360528 HPGAM_03720 Helicobacter pylori Gambia94/24 anaerobic C4-dicarboxylate transporter YP_005780452.1 760603 R 907240 CDS YP_005780453.1 385218978 12360529 762064..763062 1 NC_017371.1 COG0252 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D; L-asparaginase II 763062 12360529 HPGAM_03725 Helicobacter pylori Gambia94/24 L-asparaginase II YP_005780453.1 762064 D 907240 CDS YP_005780454.1 385218979 12360530 763102..763206 1 NC_017371.1 hypothetical protein 763206 12360530 HPGAM_03730 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780454.1 763102 D 907240 CDS YP_005780455.1 385218980 12360531 complement(763203..765089) 1 NC_017371.1 putative Outer membrane protein 765089 12360531 HPGAM_03735 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780455.1 763203 R 907240 CDS YP_005780456.1 385218981 12360532 complement(765386..766303) 1 NC_017371.1 putative Outer membrane protein 766303 12360532 HPGAM_03740 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780456.1 765386 R 907240 CDS YP_005780457.1 385218982 12360533 complement(766273..767259) 1 NC_017371.1 COG0042 tRNA-dihydrouridine synthase; tRNA-dihydrouridine synthase B 767259 12360533 HPGAM_03745 Helicobacter pylori Gambia94/24 tRNA-dihydrouridine synthase B YP_005780457.1 766273 R 907240 CDS YP_005780458.1 385218983 12360534 complement(767350..768366) 1 NC_017371.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; tRNA(Ile)-lysidine synthase 768366 12360534 HPGAM_03750 Helicobacter pylori Gambia94/24 tRNA(Ile)-lysidine synthase YP_005780458.1 767350 R 907240 CDS YP_005780459.1 385218984 12360535 complement(768404..769471) 1 NC_017371.1 hypothetical protein 769471 12360535 HPGAM_03755 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780459.1 768404 R 907240 CDS YP_005780460.1 385218985 12360536 complement(769480..769785) 1 NC_017371.1 hypothetical protein 769785 12360536 HPGAM_03760 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780460.1 769480 R 907240 CDS YP_005780461.1 385218986 12360537 complement(769775..769885) 1 NC_017371.1 hypothetical protein 769885 12360537 HPGAM_03765 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780461.1 769775 R 907240 CDS YP_005780462.1 385218987 12360538 complement(769911..771608) 1 NC_017371.1 COG0218 Predicted GTPase; hypothetical protein 771608 12360538 HPGAM_03770 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780462.1 769911 R 907240 CDS YP_005780463.1 385218988 12360539 complement(773607..774926) 1 NC_017371.1 COG0621 2-methylthioadenine synthetase; hypothetical protein 774926 12360539 HPGAM_03795 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780463.1 773607 R 907240 CDS YP_005780464.1 385218989 12360540 complement(774928..775389) 1 NC_017371.1 COG2236 Predicted phosphoribosyltransferases; putative nucleotide phosphoribosyltransferase 775389 12360540 HPGAM_03800 Helicobacter pylori Gambia94/24 putative nucleotide phosphoribosyltransferase YP_005780464.1 774928 R 907240 CDS YP_005780465.1 385218990 12360541 complement(775398..776507) 1 NC_017371.1 COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase; putative aminotransferase 776507 12360541 HPGAM_03805 Helicobacter pylori Gambia94/24 putative aminotransferase YP_005780465.1 775398 R 907240 CDS YP_005780466.1 385218991 12360542 776657..777133 1 NC_017371.1 COG1267 Phosphatidylglycerophosphatase A and related proteins; phosphatidylglycerophosphatase A 777133 12360542 HPGAM_03810 Helicobacter pylori Gambia94/24 phosphatidylglycerophosphatase A YP_005780466.1 776657 D 907240 CDS YP_005780467.1 385218992 12360543 777211..778254 1 NC_017371.1 COG1181 D-alanine-D-alanine ligase and related ATP-grasp enzymes; D-alanyl-alanine synthetase A 778254 ddl 12360543 ddl Helicobacter pylori Gambia94/24 D-alanyl-alanine synthetase A YP_005780467.1 777211 D 907240 CDS YP_005780468.1 385218993 12360544 778254..778979 1 NC_017371.1 COG0596 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily); 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 778979 12360544 HPGAM_03820 Helicobacter pylori Gambia94/24 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase YP_005780468.1 778254 D 907240 CDS YP_005780469.1 385218994 12360545 778966..780447 1 NC_017371.1 COG0770 UDP-N-acetylmuramyl pentapeptide synthase; UDP-murnac-pentapeptide presynthetase 780447 12360545 HPGAM_03825 Helicobacter pylori Gambia94/24 UDP-murnac-pentapeptide presynthetase YP_005780469.1 778966 D 907240 CDS YP_005780470.1 385218995 12360546 780457..780942 1 NC_017371.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; putative HIT family protein 780942 12360546 HPGAM_03830 Helicobacter pylori Gambia94/24 putative HIT family protein YP_005780470.1 780457 D 907240 CDS YP_005780471.1 385218996 12360547 781007..781963 1 NC_017371.1 COG0462 Phosphoribosylpyrophosphate synthetase; ribose-phosphate pyrophosphokinase 781963 12360547 HPGAM_03835 Helicobacter pylori Gambia94/24 ribose-phosphate pyrophosphokinase YP_005780471.1 781007 D 907240 CDS YP_005780472.1 385218997 12360549 complement(782014..783135) 1 NC_017371.1 COG0772 Bacterial cell division membrane protein; putative rod shape-determining protein 783135 12360549 HPGAM_03840 Helicobacter pylori Gambia94/24 putative rod shape-determining protein YP_005780472.1 782014 R 907240 CDS YP_005780473.1 385218998 12360550 784530..785513 1 NC_017371.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 785513 12360550 HPGAM_03855 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780473.1 784530 D 907240 CDS YP_005780474.1 385218999 12360551 785476..786723 1 NC_017371.1 COG3979 Uncharacterized protein contain chitin-binding domain type 3; hypothetical protein 786723 12360551 HPGAM_03860 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780474.1 785476 D 907240 CDS YP_005780475.1 385219000 12360552 786733..787911 1 NC_017371.1 COG0220 Predicted S-adenosylmethionine-dependent methyltransferase; tRNA (guanine-N(7)-)-methyltransferase 787911 12360552 HPGAM_03865 Helicobacter pylori Gambia94/24 tRNA (guanine-N(7)-)-methyltransferase YP_005780475.1 786733 D 907240 CDS YP_005780476.1 385219001 12360553 787911..788582 1 NC_017371.1 COG1136 ABC-type antimicrobial peptide transport system, ATPase component; ABC transporter ATP-binding protein 788582 12360553 HPGAM_03870 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780476.1 787911 D 907240 CDS YP_005780477.1 385219002 12360554 788569..789375 1 NC_017371.1 COG2177 Cell division protein; cell division protein FtsX 789375 12360554 HPGAM_03875 Helicobacter pylori Gambia94/24 cell division protein FtsX YP_005780477.1 788569 D 907240 CDS YP_005780478.1 385219003 12360555 789368..790570 1 NC_017371.1 COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 790570 12360555 HPGAM_03880 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780478.1 789368 D 907240 CDS YP_005780479.1 385219004 12360556 790676..791035 1 NC_017371.1 COG1334 Uncharacterized flagellar protein FlaG; flagellar protein FlaG 791035 12360556 HPGAM_03885 Helicobacter pylori Gambia94/24 flagellar protein FlaG YP_005780479.1 790676 D 907240 CDS YP_005780480.1 385219005 12360557 791052..793109 1 NC_017371.1 COG1345 Flagellar capping protein; flagellar capping protein 793109 fliD 12360557 fliD Helicobacter pylori Gambia94/24 flagellar capping protein YP_005780480.1 791052 D 907240 CDS YP_005780481.1 385219006 12360558 793151..793531 1 NC_017371.1 COG1516 Flagellin-specific chaperone FliS; flagellar protein FliS 793531 fliS 12360558 fliS Helicobacter pylori Gambia94/24 flagellar protein FliS YP_005780481.1 793151 D 907240 CDS YP_005780482.1 385219007 12360559 793518..793757 1 NC_017371.1 hypothetical protein 793757 12360559 HPGAM_03900 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780482.1 793518 D 907240 CDS YP_005780483.1 385219008 12360560 793810..794481 1 NC_017371.1 COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1; hypothetical protein 794481 12360560 HPGAM_03905 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780483.1 793810 D 907240 CDS YP_005780484.1 385219009 12360561 794483..794629 1 NC_017371.1 hypothetical protein 794629 12360561 HPGAM_03910 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780484.1 794483 D 907240 CDS YP_005780485.1 385219010 12360562 794633..795511 1 NC_017371.1 COG0388 Predicted amidohydrolase; hypothetical protein 795511 12360562 HPGAM_03915 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780485.1 794633 D 907240 CDS YP_005780486.1 385219011 12360563 795638..796951 1 NC_017371.1 COG2056 Predicted permease; hypothetical protein 796951 12360563 HPGAM_03920 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780486.1 795638 D 907240 CDS YP_005780487.1 385219012 12360564 797014..798267 1 NC_017371.1 COG0534 Na+-driven multidrug efflux pump; multidrug efflux protein 798267 12360564 HPGAM_03925 Helicobacter pylori Gambia94/24 multidrug efflux protein YP_005780487.1 797014 D 907240 CDS YP_005780488.1 385219013 12360565 complement(798268..799857) 1 NC_017371.1 COG1418 Predicted HD superfamily hydrolase; phosphodiesterase 799857 12360565 HPGAM_03930 Helicobacter pylori Gambia94/24 phosphodiesterase YP_005780488.1 798268 R 907240 CDS YP_005780489.1 385219014 12360566 complement(799757..800398) 1 NC_017371.1 COG0212 5-formyltetrahydrofolate cyclo-ligase; 5-formyltetrahydrofolate cyclo-ligase 800398 12360566 HPGAM_03935 Helicobacter pylori Gambia94/24 5-formyltetrahydrofolate cyclo-ligase YP_005780489.1 799757 R 907240 CDS YP_005780490.1 385219015 12360567 800523..801080 1 NC_017371.1 hypothetical protein 801080 12360567 HPGAM_03940 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780490.1 800523 D 907240 CDS YP_005780491.1 385219016 12360568 801086..801964 1 NC_017371.1 COG0552 Signal recognition particle GTPase; signal recognition particle-docking protein FtsY 801964 12360568 HPGAM_03945 Helicobacter pylori Gambia94/24 signal recognition particle-docking protein FtsY YP_005780491.1 801086 D 907240 CDS YP_005780492.1 385219017 12360569 complement(802003..802323) 1 NC_017371.1 COG0727 Predicted Fe-S-cluster oxidoreductase; hypothetical protein 802323 12360569 HPGAM_03950 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780492.1 802003 R 907240 CDS YP_005780493.1 385219018 12360570 complement(802384..803358) 1 NC_017371.1 hypothetical protein 803358 12360570 HPGAM_03955 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780493.1 802384 R 907240 CDS YP_005780494.1 385219019 12360571 complement(803369..804931) 1 NC_017371.1 hypothetical protein 804931 12360571 HPGAM_03960 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780494.1 803369 R 907240 CDS YP_005780495.1 385219020 12360572 complement(805166..806131) 1 NC_017371.1 COG2896 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein A 806131 moaA 12360572 moaA Helicobacter pylori Gambia94/24 molybdenum cofactor biosynthesis protein A YP_005780495.1 805166 R 907240 CDS YP_005780496.1 385219021 12360573 806218..806823 1 NC_017371.1 COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; molybdopterin-guanine dinucleotide biosynthesis protein MobA 806823 12360573 HPGAM_03970 Helicobacter pylori Gambia94/24 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_005780496.1 806218 D 907240 CDS YP_005780497.1 385219022 12360574 806816..807892 1 NC_017371.1 COG1377 Flagellar biosynthesis pathway, component FlhB; flagellar biosynthesis protein FlhB 807892 flhB 12360574 flhB Helicobacter pylori Gambia94/24 flagellar biosynthesis protein FlhB YP_005780497.1 806816 D 907240 CDS YP_005780498.1 385219023 12360575 complement(807990..808727) 1 NC_017371.1 hypothetical protein 808727 12360575 HPGAM_03980 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780498.1 807990 R 907240 CDS YP_005780499.1 385219024 12360576 complement(808735..810093) 1 NC_017371.1 COG0860 N-acetylmuramoyl-L-alanine amidase; N-acetylmuramoyl-L-alanine amidase 810093 12360576 HPGAM_03985 Helicobacter pylori Gambia94/24 N-acetylmuramoyl-L-alanine amidase YP_005780499.1 808735 R 907240 CDS YP_005780500.1 385219025 12360577 complement(810100..811191) 1 NC_017371.1 COG2070 Dioxygenases related to 2-nitropropane dioxygenase; hypothetical protein 811191 12360577 HPGAM_03990 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780500.1 810100 R 907240 CDS YP_005780501.1 385219026 12360578 complement(811208..812416) 1 NC_017371.1 COG0162 Tyrosyl-tRNA synthetase; tyrosyl-tRNA synthetase 812416 12360578 HPGAM_03995 Helicobacter pylori Gambia94/24 tyrosyl-tRNA synthetase YP_005780501.1 811208 R 907240 CDS YP_005780502.1 385219027 12360579 complement(812436..814766) 1 NC_017371.1 COG0317 Guanosine polyphosphate pyrophosphohydrolases/synthetases; guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase 814766 12360579 HPGAM_04000 Helicobacter pylori Gambia94/24 guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase YP_005780502.1 812436 R 907240 CDS YP_005780503.1 385219028 12360580 complement(814753..814977) 1 NC_017371.1 COG1758 DNA-directed RNA polymerase, subunit K/omega; DNA-directed RNA polymerase subunit omega 814977 rpoZ 12360580 rpoZ Helicobacter pylori Gambia94/24 DNA-directed RNA polymerase subunit omega YP_005780503.1 814753 R 907240 CDS YP_005780504.1 385219029 12360581 complement(815019..815741) 1 NC_017371.1 COG0528 Uridylate kinase; uridylate kinase 815741 pyrH 12360581 pyrH Helicobacter pylori Gambia94/24 uridylate kinase YP_005780504.1 815019 R 907240 CDS YP_005780505.1 385219030 12360582 complement(815832..816515) 1 NC_017371.1 COG1427 Predicted periplasmic solute-binding protein; hypothetical protein 816515 12360582 HPGAM_04015 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780505.1 815832 R 907240 CDS YP_005780506.1 385219031 12360583 816651..819209 1 NC_017371.1 COG1049 Aconitase B; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 819209 12360583 HPGAM_04020 Helicobacter pylori Gambia94/24 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_005780506.1 816651 D 907240 CDS YP_005780507.1 385219032 12360584 819291..819557 1 NC_017371.1 hypothetical protein 819557 12360584 HPGAM_04025 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780507.1 819291 D 907240 CDS YP_005780508.1 385219033 12360585 complement(819675..819851) 1 NC_017371.1 hypothetical protein 819851 12360585 HPGAM_04030 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780508.1 819675 R 907240 CDS YP_005780509.1 385219034 12360586 819845..821134 1 NC_017371.1 hypothetical protein 821134 12360586 HPGAM_04035 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780509.1 819845 D 907240 CDS YP_005780510.1 385219035 12360587 821229..822596 1 NC_017371.1 outermembrane protein HofE 822596 12360587 HPGAM_04040 Helicobacter pylori Gambia94/24 outermembrane protein HofE YP_005780510.1 821229 D 907240 CDS YP_005780511.1 385219036 12360588 complement(822603..823130) 1 NC_017371.1 hypothetical protein 823130 12360588 HPGAM_04045 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780511.1 822603 R 907240 CDS YP_005780512.1 385219037 12360589 complement(823619..824173) 1 NC_017371.1 COG2834 Outer membrane lipoprotein-sorting protein; lipoprotein chaperone 824173 lolA 12360589 lolA Helicobacter pylori Gambia94/24 lipoprotein chaperone YP_005780512.1 823619 R 907240 CDS YP_005780513.1 385219038 12360590 824320..826917 1 NC_017371.1 COG0653 Preprotein translocase subunit SecA (ATPase, RNA helicase); preprotein translocase subunit SecA 826917 12360590 HPGAM_04055 Helicobacter pylori Gambia94/24 preprotein translocase subunit SecA YP_005780513.1 824320 D 907240 CDS YP_005780514.1 385219039 12360591 826907..828139 1 NC_017371.1 COG4591 ABC-type transport system, involved in lipoprotein release, permease component; lipoprotein release system transmembrane protein 828139 12360591 HPGAM_04060 Helicobacter pylori Gambia94/24 lipoprotein release system transmembrane protein YP_005780514.1 826907 D 907240 CDS YP_005780515.1 385219040 12360592 828419..829918 1 NC_017371.1 putative Outer membrane protein 829918 12360592 HPGAM_04065 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780515.1 828419 D 907240 CDS YP_005780516.1 385219041 12360593 complement(829939..830052) 1 NC_017371.1 hypothetical protein 830052 12360593 HPGAM_04070 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780516.1 829939 R 907240 CDS YP_005780517.1 385219042 12360594 complement(830134..831348) 1 NC_017371.1 COG0732 Restriction endonuclease S subunits; type I restriction-modification methylase 831348 12360594 HPGAM_04075 Helicobacter pylori Gambia94/24 type I restriction-modification methylase YP_005780517.1 830134 R 907240 CDS YP_005780518.1 385219043 12360595 complement(831387..833456) 1 NC_017371.1 COG2217 Cation transport ATPase; putative heavy-metal cation-transporting P-type ATPase 833456 12360595 HPGAM_04080 Helicobacter pylori Gambia94/24 putative heavy-metal cation-transporting P-type ATPase YP_005780518.1 831387 R 907240 CDS YP_005780519.1 385219044 12360596 complement(833481..835001) 1 NC_017371.1 COG0606 Predicted ATPase with chaperone activity; hypothetical protein 835001 12360596 HPGAM_04085 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780519.1 833481 R 907240 CDS YP_005780520.1 385219045 12360597 complement(835007..835531) 1 NC_017371.1 COG0242 N-formylmethionyl-tRNA deformylase; peptide deformylase 835531 def 12360597 def Helicobacter pylori Gambia94/24 peptide deformylase YP_005780520.1 835007 R 907240 CDS YP_005780521.1 385219046 12360598 complement(835536..836123) 1 NC_017371.1 COG0740 Protease subunit of ATP-dependent Clp proteases; ATP-dependent Clp protease proteolytic subunit 836123 clpP 12360598 clpP Helicobacter pylori Gambia94/24 ATP-dependent Clp protease proteolytic subunit YP_005780521.1 835536 R 907240 CDS YP_005780522.1 385219047 12360599 complement(836144..837499) 1 NC_017371.1 COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); trigger factor 837499 tig 12360599 tig Helicobacter pylori Gambia94/24 trigger factor YP_005780522.1 836144 R 907240 CDS YP_005780523.1 385219048 12360600 complement(837612..838448) 1 NC_017371.1 putative Outer membrane protein 838448 12360600 HPGAM_04105 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780523.1 837612 R 907240 CDS YP_005780524.1 385219049 12360601 complement(838470..839252) 1 NC_017371.1 neuraminyllactose-binding hemagglutinin 839252 12360601 HPGAM_04110 Helicobacter pylori Gambia94/24 neuraminyllactose-binding hemagglutinin YP_005780524.1 838470 R 907240 CDS YP_005780525.1 385219050 12360602 complement(839371..839847) 1 NC_017371.1 COG0315 Molybdenum cofactor biosynthesis enzyme; molybdenum cofactor biosynthesis protein MoaC 839847 moaC 12360602 moaC Helicobacter pylori Gambia94/24 molybdenum cofactor biosynthesis protein MoaC YP_005780525.1 839371 R 907240 CDS YP_005780526.1 385219051 12360603 complement(839856..840386) 1 NC_017371.1 COG0521 Molybdopterin biosynthesis enzymes; molybdenum cofactor biosynthesis protein MogA 840386 mogA 12360603 mogA Helicobacter pylori Gambia94/24 molybdenum cofactor biosynthesis protein MogA YP_005780526.1 839856 R 907240 CDS YP_005780527.1 385219052 12360604 complement(840399..840836) 1 NC_017371.1 COG0314 Molybdopterin converting factor, large subunit; molybdopterin converting factor subunit 2 840836 12360604 HPGAM_04125 Helicobacter pylori Gambia94/24 molybdopterin converting factor subunit 2 YP_005780527.1 840399 R 907240 CDS YP_005780528.1 385219053 12360605 complement(840837..841058) 1 NC_017371.1 COG1977 Molybdopterin converting factor, small subunit; putative molybdopterin converting factor subunit 1 841058 12360605 HPGAM_04130 Helicobacter pylori Gambia94/24 putative molybdopterin converting factor subunit 1 YP_005780528.1 840837 R 907240 CDS YP_005780529.1 385219054 12360606 complement(841136..841714) 1 NC_017371.1 COG0807 GTP cyclohydrolase II; GTP cyclohydrolase II 841714 ribA 12360606 ribA Helicobacter pylori Gambia94/24 GTP cyclohydrolase II YP_005780529.1 841136 R 907240 CDS YP_005780530.1 385219055 12360607 complement(841803..842642) 1 NC_017371.1 hypothetical protein 842642 12360607 HPGAM_04140 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780530.1 841803 R 907240 CDS YP_005780531.1 385219056 12360608 complement(842729..843763) 1 NC_017371.1 COG0108 3,4-dihydroxy-2-butanone 4-phosphate synthase; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 843763 12360608 HPGAM_04145 Helicobacter pylori Gambia94/24 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_005780531.1 842729 R 907240 CDS YP_005780532.1 385219057 12360609 complement(843861..844706) 1 NC_017371.1 COG3306 Glycosyltransferase involved in LPS biosynthesis; family 25 glycosyl transferase 844706 12360609 HPGAM_04150 Helicobacter pylori Gambia94/24 family 25 glycosyl transferase YP_005780532.1 843861 R 907240 CDS YP_005780533.1 385219058 12360610 844788..845408 1 NC_017371.1 COG1451 Predicted metal-dependent hydrolase; hypothetical protein 845408 12360610 HPGAM_04155 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780533.1 844788 D 907240 CDS YP_005780534.1 385219059 12360611 complement(848017..848367) 1 NC_017371.1 COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); 4'-phosphopantetheinyl transferase 848367 acpS 12360611 acpS Helicobacter pylori Gambia94/24 4'-phosphopantetheinyl transferase YP_005780534.1 848017 R 907240 CDS YP_005780535.1 385219060 12360612 complement(848374..848925) 1 NC_017371.1 COG1580 Flagellar basal body-associated protein; flagellar basal body-associated protein FliL 848925 fliL 12360612 fliL Helicobacter pylori Gambia94/24 flagellar basal body-associated protein FliL YP_005780535.1 848374 R 907240 CDS YP_005780536.1 385219061 12360613 complement(848934..849536) 1 NC_017371.1 COG0742 N6-adenine-specific methylase; putative N-6 adenine methyltransferase 849536 12360613 HPGAM_04180 Helicobacter pylori Gambia94/24 putative N-6 adenine methyltransferase YP_005780536.1 848934 R 907240 CDS YP_005780537.1 385219062 12360614 complement(849515..849850) 1 NC_017371.1 hypothetical protein 849850 12360614 HPGAM_04185 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780537.1 849515 R 907240 CDS YP_005780538.1 385219063 12360615 complement(850311..851312) 1 NC_017371.1 COG1565 Uncharacterized conserved protein; hypothetical protein 851312 12360615 HPGAM_04190 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780538.1 850311 R 907240 CDS YP_005780539.1 385219064 12360616 851444..852061 1 NC_017371.1 COG0491 Zn-dependent hydrolases, including glyoxylases; putative hydrolase 852061 12360616 HPGAM_04195 Helicobacter pylori Gambia94/24 putative hydrolase YP_005780539.1 851444 D 907240 CDS YP_005780540.1 385219065 12360617 852062..852829 1 NC_017371.1 COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2; thiamin biosynthesis protein (thiF) 852829 12360617 HPGAM_04200 Helicobacter pylori Gambia94/24 thiamin biosynthesis protein (thiF) YP_005780540.1 852062 D 907240 CDS YP_005780541.1 385219066 12360618 852845..853618 1 NC_017371.1 COG1291 Flagellar motor component; flagellar motor protein MotA 853618 12360618 HPGAM_04205 Helicobacter pylori Gambia94/24 flagellar motor protein MotA YP_005780541.1 852845 D 907240 CDS YP_005780542.1 385219067 12360619 853621..854394 1 NC_017371.1 COG1360 Flagellar motor protein; flagellar motor protein MotB 854394 motB 12360619 motB Helicobacter pylori Gambia94/24 flagellar motor protein MotB YP_005780542.1 853621 D 907240 CDS YP_005780543.1 385219068 12360620 854400..854837 1 NC_017371.1 hypothetical protein 854837 12360620 HPGAM_04215 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780543.1 854400 D 907240 CDS YP_005780544.1 385219069 12360621 854951..856612 1 NC_017371.1 COG1174 ABC-type proline/glycine betaine transport systems, permease component; putative osmoprotection binding protein 856612 12360621 HPGAM_04220 Helicobacter pylori Gambia94/24 putative osmoprotection binding protein YP_005780544.1 854951 D 907240 CDS YP_005780545.1 385219070 12360622 856615..857265 1 NC_017371.1 COG1125 ABC-type proline/glycine betaine transport systems, ATPase components; osmoprotection ATP-binding protein 857265 12360622 HPGAM_04225 Helicobacter pylori Gambia94/24 osmoprotection ATP-binding protein YP_005780545.1 856615 D 907240 CDS YP_005780546.1 385219071 12360623 857439..857900 1 NC_017371.1 hypothetical protein 857900 12360623 HPGAM_04230 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780546.1 857439 D 907240 CDS YP_005780547.1 385219072 12360624 857901..859685 1 NC_017371.1 COG0322 Nuclease subunit of the excinuclease complex; excinuclease ABC subunit C 859685 uvrC 12360624 uvrC Helicobacter pylori Gambia94/24 excinuclease ABC subunit C YP_005780547.1 857901 D 907240 CDS YP_005780548.1 385219073 12360625 859696..860961 1 NC_017371.1 COG0460 Homoserine dehydrogenase; homoserine dehydrogenase 860961 12360625 HPGAM_04240 Helicobacter pylori Gambia94/24 homoserine dehydrogenase YP_005780548.1 859696 D 907240 CDS YP_005780549.1 385219074 12360626 860961..861305 1 NC_017371.1 COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase; hypothetical protein 861305 12360626 HPGAM_04245 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780549.1 860961 D 907240 CDS YP_005780550.1 385219075 12360627 861397..861717 1 NC_017371.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 861717 12360627 HPGAM_04250 Helicobacter pylori Gambia94/24 thioredoxin YP_005780550.1 861397 D 907240 CDS YP_005780551.1 385219076 12360628 861723..862658 1 NC_017371.1 COG0492 Thioredoxin reductase; thioredoxin reductase 862658 12360628 HPGAM_04255 Helicobacter pylori Gambia94/24 thioredoxin reductase YP_005780551.1 861723 D 907240 CDS YP_005780552.1 385219077 12360629 863018..863839 1 NC_017371.1 COG3306 Glycosyltransferase involved in LPS biosynthesis; putative lipopolysaccharide biosynthesis protein 863839 12360629 HPGAM_04260 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005780552.1 863018 D 907240 CDS YP_005780553.1 385219078 12360630 complement(864051..864299) 1 NC_017371.1 COG0724 RNA-binding proteins (RRM domain); hypothetical protein 864299 12360630 HPGAM_04265 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780553.1 864051 R 907240 CDS YP_005780554.1 385219079 12360631 864453..864629 1 NC_017371.1 hypothetical protein 864629 12360631 HPGAM_04270 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780554.1 864453 D 907240 CDS YP_005780555.1 385219080 12360632 complement(864626..865306) 1 NC_017371.1 COG0356 F0F1-type ATP synthase, subunit a; F0F1 ATP synthase subunit A 865306 12360632 HPGAM_04275 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit A YP_005780555.1 864626 R 907240 CDS YP_005780556.1 385219081 12360633 complement(865428..866873) 1 NC_017371.1 COG0516 IMP dehydrogenase/GMP reductase; inosine 5'-monophosphate dehydrogenase 866873 12360633 HPGAM_04280 Helicobacter pylori Gambia94/24 inosine 5'-monophosphate dehydrogenase YP_005780556.1 865428 R 907240 CDS YP_005780557.1 385219082 12360634 complement(866883..868244) 1 NC_017371.1 COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases; aspartyl/glutamyl-tRNA amidotransferase subunit A 868244 gatA 12360634 gatA Helicobacter pylori Gambia94/24 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_005780557.1 866883 R 907240 CDS YP_005780558.1 385219083 12360635 complement(868303..868893) 1 NC_017371.1 COG0237 Dephospho-CoA kinase; dephospho-CoA kinase 868893 coaE 12360635 coaE Helicobacter pylori Gambia94/24 dephospho-CoA kinase YP_005780558.1 868303 R 907240 CDS YP_005780559.1 385219084 12360636 complement(868895..869683) 1 NC_017371.1 COG0421 Spermidine synthase; spermidine synthase 869683 speE 12360636 speE Helicobacter pylori Gambia94/24 spermidine synthase YP_005780559.1 868895 R 907240 CDS YP_005780560.1 385219085 12360637 complement(869770..870660) 1 NC_017371.1 hypothetical protein 870660 12360637 HPGAM_04300 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780560.1 869770 R 907240 CDS YP_005780561.1 385219086 12360638 870737..872128 1 NC_017371.1 COG1160 Predicted GTPases; GTP-binding protein Der 872128 12360638 HPGAM_04305 Helicobacter pylori Gambia94/24 GTP-binding protein Der YP_005780561.1 870737 D 907240 CDS YP_005780562.1 385219087 12360639 872269..872559 1 NC_017371.1 COG0776 Bacterial nucleoid DNA-binding protein; DNA-binding protein HU 872559 12360639 HPGAM_04310 Helicobacter pylori Gambia94/24 DNA-binding protein HU YP_005780562.1 872269 D 907240 CDS YP_005780563.1 385219088 12360641 complement(872787..872891) 1 NC_017371.1 hypothetical protein 872891 12360641 HPGAM_04315 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780563.1 872787 R 907240 CDS YP_005780564.1 385219089 12360642 complement(872935..873030) 1 NC_017371.1 hypothetical protein 873030 12360642 HPGAM_04320 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780564.1 872935 R 907240 CDS YP_005780565.1 385219090 12360643 complement(873054..873230) 1 NC_017371.1 hypothetical protein 873230 12360643 HPGAM_04325 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780565.1 873054 R 907240 CDS YP_005780566.1 385219091 12360644 873229..873834 1 NC_017371.1 COG3018 Uncharacterized protein conserved in bacteria; hypothetical protein 873834 12360644 HPGAM_04330 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780566.1 873229 D 907240 CDS YP_005780567.1 385219092 12360645 873854..874471 1 NC_017371.1 hypothetical protein 874471 12360645 HPGAM_04335 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780567.1 873854 D 907240 CDS YP_005780568.1 385219093 12360646 874468..876231 1 NC_017371.1 COG2067 Long-chain fatty acid transport protein; putative Outer membrane protein 876231 12360646 HPGAM_04340 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780568.1 874468 D 907240 CDS YP_005780569.1 385219094 12360647 876235..877236 1 NC_017371.1 COG1086 Predicted nucleoside-diphosphate sugar epimerases; UDP-GlcNAc C6 dehydratase/C5 epimerase 877236 12360647 HPGAM_04345 Helicobacter pylori Gambia94/24 UDP-GlcNAc C6 dehydratase/C5 epimerase YP_005780569.1 876235 D 907240 CDS YP_005780570.1 385219095 12360648 877233..878510 1 NC_017371.1 COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 878510 12360648 HPGAM_04350 Helicobacter pylori Gambia94/24 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_005780570.1 877233 D 907240 CDS YP_005780571.1 385219096 12360649 878510..879247 1 NC_017371.1 hypothetical protein 879247 12360649 HPGAM_04355 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780571.1 878510 D 907240 CDS YP_005780572.1 385219097 12360650 complement(879356..880009) 1 NC_017371.1 COG0352 Thiamine monophosphate synthase; thiamine-phosphate pyrophosphorylase 880009 thiE 12360650 thiE Helicobacter pylori Gambia94/24 thiamine-phosphate pyrophosphorylase YP_005780572.1 879356 R 907240 CDS YP_005780573.1 385219098 12360651 complement(880002..880811) 1 NC_017371.1 COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; phosphomethylpyrimidine kinase 880811 12360651 HPGAM_04365 Helicobacter pylori Gambia94/24 phosphomethylpyrimidine kinase YP_005780573.1 880002 R 907240 CDS YP_005780574.1 385219099 12360652 complement(880808..881587) 1 NC_017371.1 COG2145 Hydroxyethylthiazole kinase, sugar kinase family; hydroxyethylthiazole kinase 881587 12360652 HPGAM_04370 Helicobacter pylori Gambia94/24 hydroxyethylthiazole kinase YP_005780574.1 880808 R 907240 CDS YP_005780575.1 385219100 12360653 complement(881679..884678) 1 NC_017371.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; type I restriction enzyme R protein 884678 12360653 HPGAM_04375 Helicobacter pylori Gambia94/24 type I restriction enzyme R protein YP_005780575.1 881679 R 907240 CDS YP_005780576.1 385219101 12360654 complement(884860..886062) 1 NC_017371.1 COG0732 Restriction endonuclease S subunits; type I restriction-modification methylase 886062 12360654 HPGAM_04380 Helicobacter pylori Gambia94/24 type I restriction-modification methylase YP_005780576.1 884860 R 907240 CDS YP_005780577.1 385219102 12360655 complement(886073..887728) 1 NC_017371.1 COG0286 Type I restriction-modification system methyltransferase subunit; type I restriction enzyme M protein 887728 12360655 HPGAM_04385 Helicobacter pylori Gambia94/24 type I restriction enzyme M protein YP_005780577.1 886073 R 907240 CDS YP_005780578.1 385219103 12360656 887833..888519 1 NC_017371.1 COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 888519 12360656 HPGAM_04390 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780578.1 887833 D 907240 CDS YP_005780579.1 385219104 12360657 complement(888542..889498) 1 NC_017371.1 COG2958 Uncharacterized protein conserved in bacteria; Excinuclease ATPase subunit 889498 12360657 HPGAM_04395 Helicobacter pylori Gambia94/24 Excinuclease ATPase subunit YP_005780579.1 888542 R 907240 CDS YP_005780580.1 385219105 12360658 complement(889495..891096) 1 NC_017371.1 COG0488 ATPase components of ABC transporters with duplicated ATPase domains; ABC transporter ATP-binding protein 891096 12360658 HPGAM_04400 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780580.1 889495 R 907240 CDS YP_005780581.1 385219106 12360659 891299..892276 1 NC_017371.1 COG0516 IMP dehydrogenase/GMP reductase; guanosine 5'-monophosphate oxidoreductase 892276 12360659 HPGAM_04405 Helicobacter pylori Gambia94/24 guanosine 5'-monophosphate oxidoreductase YP_005780581.1 891299 D 907240 CDS YP_005780582.1 385219107 12360660 complement(892300..892878) 1 NC_017371.1 COG0279 Phosphoheptose isomerase; phosphoheptose isomerase 892878 12360660 HPGAM_04410 Helicobacter pylori Gambia94/24 phosphoheptose isomerase YP_005780582.1 892300 R 907240 CDS YP_005780583.1 385219108 12360661 complement(892871..894262) 1 NC_017371.1 COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase; putative ADP-D-glycero-D-mannoheptose synthase 894262 12360661 HPGAM_04415 Helicobacter pylori Gambia94/24 putative ADP-D-glycero-D-mannoheptose synthase YP_005780583.1 892871 R 907240 CDS YP_005780584.1 385219109 12360662 complement(894259..895248) 1 NC_017371.1 COG0451 Nucleoside-diphosphate-sugar epimerases; ADP-L-glycero-D-manno-heptose-6-epimerase 895248 12360662 HPGAM_04420 Helicobacter pylori Gambia94/24 ADP-L-glycero-D-manno-heptose-6-epimerase YP_005780584.1 894259 R 907240 CDS YP_005780585.1 385219110 12360663 complement(895258..895782) 1 NC_017371.1 COG0241 Histidinol phosphatase and related phosphatases; D,D-heptose 1,7-bisphosphate phosphatase 895782 12360663 HPGAM_04425 Helicobacter pylori Gambia94/24 D,D-heptose 1,7-bisphosphate phosphatase YP_005780585.1 895258 R 907240 CDS YP_005780586.1 385219111 12360664 complement(895769..896527) 1 NC_017371.1 COG2836 Uncharacterized conserved protein; hypothetical protein 896527 12360664 HPGAM_04430 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780586.1 895769 R 907240 CDS YP_005780587.1 385219112 12360665 complement(896518..897189) 1 NC_017371.1 COG1521 Putative transcriptional regulator, homolog of Bvg accessory factor; pantothenate kinase 897189 12360665 HPGAM_04435 Helicobacter pylori Gambia94/24 pantothenate kinase YP_005780587.1 896518 R 907240 CDS YP_005780588.1 385219113 12360666 complement(897194..898825) 1 NC_017371.1 hypothetical protein 898825 12360666 HPGAM_04440 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780588.1 897194 R 907240 CDS YP_005780589.1 385219114 12360667 complement(898830..899486) 1 NC_017371.1 hypothetical protein 899486 12360667 HPGAM_04445 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780589.1 898830 R 907240 CDS YP_005780590.1 385219115 12360668 complement(899483..899920) 1 NC_017371.1 COG0756 dUTPase; deoxyuridine 5'-triphosphate nucleotidohydrolase 899920 dut 12360668 dut Helicobacter pylori Gambia94/24 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_005780590.1 899483 R 907240 CDS YP_005780591.1 385219116 12360669 complement(899910..900404) 1 NC_017371.1 COG0782 Transcription elongation factor; transcription elongation factor GreA 900404 greA 12360669 greA Helicobacter pylori Gambia94/24 transcription elongation factor GreA YP_005780591.1 899910 R 907240 CDS YP_005780592.1 385219117 12360670 complement(900445..901527) 1 NC_017371.1 COG0763 Lipid A disaccharide synthetase; ipid-A-disaccharide synthase 901527 12360670 HPGAM_04460 Helicobacter pylori Gambia94/24 ipid-A-disaccharide synthase YP_005780592.1 900445 R 907240 CDS YP_005780593.1 385219118 12360671 complement(901527..901988) 1 NC_017371.1 hypothetical protein 901988 12360671 HPGAM_04465 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780593.1 901527 R 907240 CDS YP_005780594.1 385219119 12360672 complement(901992..902345) 1 NC_017371.1 COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); hydrogenase nickel incorporation protein 902345 hypA 12360672 hypA Helicobacter pylori Gambia94/24 hydrogenase nickel incorporation protein YP_005780594.1 901992 R 907240 CDS YP_005780595.1 385219120 12360673 complement(902404..904560) 1 NC_017371.1 COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 904560 flgE 12360673 flgE Helicobacter pylori Gambia94/24 flagellar hook protein FlgE YP_005780595.1 902404 R 907240 CDS YP_005780596.1 385219121 12360674 complement(904770..905504) 1 NC_017371.1 COG2134 CDP-diacylglycerol pyrophosphatase; CDP-diacylglycerol pyrophosphatase 905504 12360674 HPGAM_04480 Helicobacter pylori Gambia94/24 CDP-diacylglycerol pyrophosphatase YP_005780596.1 904770 R 907240 CDS YP_005780597.1 385219122 12360675 905780..906109 1 NC_017371.1 COG2824 Uncharacterized Zn-ribbon-containing protein involved in phosphonate metabolism; alkylphosphonate uptake protein 906109 12360675 HPGAM_04485 Helicobacter pylori Gambia94/24 alkylphosphonate uptake protein YP_005780597.1 905780 D 907240 CDS YP_005780598.1 385219123 12360676 complement(906150..906365) 1 NC_017371.1 hypothetical protein 906365 12360676 HPGAM_04490 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780598.1 906150 R 907240 CDS YP_005780599.1 385219124 12360677 complement(906449..907324) 1 NC_017371.1 hypothetical protein 907324 12360677 HPGAM_04495 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780599.1 906449 R 907240 CDS YP_005780600.1 385219125 12360678 complement(907475..908992) 1 NC_017371.1 COG0753 Catalase; catalase 908992 12360678 HPGAM_04500 Helicobacter pylori Gambia94/24 catalase YP_005780600.1 907475 R 907240 CDS YP_005780601.1 385219126 12360679 909315..911690 1 NC_017371.1 COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 911690 12360679 HPGAM_04505 Helicobacter pylori Gambia94/24 iron-regulated outer membrane protein YP_005780601.1 909315 D 907240 CDS YP_005780602.1 385219127 12360680 complement(911691..912164) 1 NC_017371.1 COG0817 Holliday junction resolvasome, endonuclease subunit; Holliday junction resolvase 912164 ruvC 12360680 ruvC Helicobacter pylori Gambia94/24 Holliday junction resolvase YP_005780602.1 911691 R 907240 CDS YP_005780603.1 385219128 12360681 912297..913028 1 NC_017371.1 COG1432 Uncharacterized conserved protein; hypothetical protein 913028 12360681 HPGAM_04515 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780603.1 912297 D 907240 CDS YP_005780604.1 385219129 12360682 complement(913711..913914) 1 NC_017371.1 hypothetical protein 913914 12360682 HPGAM_04520 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780604.1 913711 R 907240 CDS YP_005780605.1 385219130 12360683 complement(914106..914633) 1 NC_017371.1 hypothetical protein 914633 12360683 HPGAM_04525 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780605.1 914106 R 907240 CDS YP_005780606.1 385219131 12360684 complement(914859..915410) 1 NC_017371.1 COG0632 Holliday junction resolvasome, DNA-binding subunit; Holliday junction DNA helicase RuvA 915410 ruvA 12360684 ruvA Helicobacter pylori Gambia94/24 Holliday junction DNA helicase RuvA YP_005780606.1 914859 R 907240 CDS YP_005780607.1 385219132 12360685 complement(915435..917279) 1 NC_017371.1 hypothetical protein 917279 12360685 HPGAM_04535 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780607.1 915435 R 907240 CDS YP_005780608.1 385219133 12360686 917372..918832 1 NC_017371.1 COG0728 Uncharacterized membrane protein, putative virulence factor; virulence factor MviN 918832 12360686 HPGAM_04540 Helicobacter pylori Gambia94/24 virulence factor MviN YP_005780608.1 917372 D 907240 CDS YP_005780609.1 385219134 12360687 918833..920230 1 NC_017371.1 COG0215 Cysteinyl-tRNA synthetase; cysteinyl-tRNA synthetase 920230 cysS 12360687 cysS Helicobacter pylori Gambia94/24 cysteinyl-tRNA synthetase YP_005780609.1 918833 D 907240 CDS YP_005780610.1 385219135 12360688 920454..924320 1 NC_017371.1 vacuolating cytotoxin 924320 12360688 HPGAM_04550 Helicobacter pylori Gambia94/24 vacuolating cytotoxin YP_005780610.1 920454 D 907240 CDS YP_005780611.1 385219136 12360689 complement(924392..925402) 1 NC_017371.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein 925402 12360689 HPGAM_04555 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005780611.1 924392 R 907240 CDS YP_005780612.1 385219137 12360690 complement(925575..926342) 1 NC_017371.1 COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components; IRON(III) dicitrate transport system ATP-binding protein 926342 12360690 HPGAM_04560 Helicobacter pylori Gambia94/24 IRON(III) dicitrate transport system ATP-binding protein YP_005780612.1 925575 R 907240 CDS YP_005780613.1 385219138 12360691 complement(926342..927322) 1 NC_017371.1 COG0609 ABC-type Fe3+-siderophore transport system, permease component; iron(III) dicitrate ABC transporter, permease protein (fecD) 927322 12360691 HPGAM_04565 Helicobacter pylori Gambia94/24 iron(III) dicitrate ABC transporter, permease protein (fecD) YP_005780613.1 926342 R 907240 CDS YP_005780614.1 385219139 12360692 complement(927315..928172) 1 NC_017371.1 COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); hypothetical protein 928172 12360692 HPGAM_04570 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780614.1 927315 R 907240 CDS YP_005780615.1 385219140 12360693 928312..928836 1 NC_017371.1 COG1607 Acyl-CoA hydrolase; hypothetical protein 928836 12360693 HPGAM_04575 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780615.1 928312 D 907240 CDS YP_005780616.1 385219141 12360694 complement(928880..929212) 1 NC_017371.1 COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 929212 12360694 HPGAM_04580 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780616.1 928880 R 907240 CDS YP_005780617.1 385219142 12360695 complement(929384..929503) 1 NC_017371.1 hypothetical protein 929503 12360695 HPGAM_04585 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780617.1 929384 R 907240 CDS YP_005780618.1 385219143 12360696 complement(930074..930433) 1 NC_017371.1 hypothetical protein 930433 12360696 HPGAM_04590 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780618.1 930074 R 907240 CDS YP_005780619.1 385219144 12360697 complement(930513..930749) 1 NC_017371.1 COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 930749 12360697 HPGAM_04595 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780619.1 930513 R 907240 CDS YP_005780620.1 385219145 12360698 complement(930763..931050) 1 NC_017371.1 hypothetical protein 931050 12360698 HPGAM_04600 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780620.1 930763 R 907240 CDS YP_005780621.1 385219146 12360699 complement(931098..931364) 1 NC_017371.1 COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 931364 12360699 HPGAM_04605 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780621.1 931098 R 907240 CDS YP_005780622.1 385219147 12360700 complement(931345..931710) 1 NC_017371.1 hypothetical protein 931710 12360700 HPGAM_04610 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780622.1 931345 R 907240 CDS YP_005780623.1 385219148 12360701 complement(932599..934839) 1 NC_017371.1 outer membrane protein 934839 12360701 HPGAM_04615 Helicobacter pylori Gambia94/24 outer membrane protein YP_005780623.1 932599 R 907240 CDS YP_005780624.1 385219149 12360704 complement(935851..936126) 1 NC_017371.1 COG0409 Hydrogenase maturation factor; hypothetical protein 936126 12360704 HPGAM_04620 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780624.1 935851 R 907240 CDS YP_005780625.1 385219150 12360705 complement(936093..937205) 1 NC_017371.1 COG0409 Hydrogenase maturation factor; hydrogenase expression/formation protein HypD 937205 12360705 HPGAM_04625 Helicobacter pylori Gambia94/24 hydrogenase expression/formation protein HypD YP_005780625.1 936093 R 907240 CDS YP_005780626.1 385219151 12360706 complement(937211..937444) 1 NC_017371.1 COG0298 Hydrogenase maturation factor; hydrogenase assembly chaperone 937444 12360706 HPGAM_04630 Helicobacter pylori Gambia94/24 hydrogenase assembly chaperone YP_005780626.1 937211 R 907240 CDS YP_005780627.1 385219152 12360707 complement(937444..938172) 1 NC_017371.1 COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; hydrogenase/urease nickel incorporation protein hypB 938172 12360707 HPGAM_04635 Helicobacter pylori Gambia94/24 hydrogenase/urease nickel incorporation protein hypB YP_005780627.1 937444 R 907240 CDS YP_005780628.1 385219153 12360708 complement(938284..938412) 1 NC_017371.1 hypothetical protein 938412 12360708 HPGAM_04640 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780628.1 938284 R 907240 CDS YP_005780629.1 385219154 12360709 complement(938423..938722) 1 NC_017371.1 COG1917 Uncharacterized conserved protein, contains double-stranded beta-helix domain; hypothetical protein 938722 12360709 HPGAM_04645 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780629.1 938423 R 907240 CDS YP_005780630.1 385219155 12360710 complement(938733..939938) 1 NC_017371.1 COG0282 Acetate kinase; acetate kinase A/propionate kinase 2 939938 12360710 HPGAM_04650 Helicobacter pylori Gambia94/24 acetate kinase A/propionate kinase 2 YP_005780630.1 938733 R 907240 CDS YP_005780631.1 385219156 12360711 complement(939950..941509) 1 NC_017371.1 COG0280 Phosphotransacetylase; phosphotransacetylase 941509 12360711 HPGAM_04655 Helicobacter pylori Gambia94/24 phosphotransacetylase YP_005780631.1 939950 R 907240 CDS YP_005780632.1 385219157 12360712 941690..943246 1 NC_017371.1 hypothetical protein 943246 12360712 HPGAM_04660 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780632.1 941690 D 907240 CDS YP_005780633.1 385219158 12360713 943297..944202 1 NC_017371.1 COG1843 Flagellar hook capping protein; flagellar basal body rod modification protein 944202 flgD 12360713 flgD Helicobacter pylori Gambia94/24 flagellar basal body rod modification protein YP_005780633.1 943297 D 907240 CDS YP_005780634.1 385219159 12360714 944199..946016 1 NC_017371.1 COG1749 Flagellar hook protein FlgE; flagellar hook protein FlgE 946016 flgE 12360714 flgE Helicobacter pylori Gambia94/24 flagellar hook protein FlgE YP_005780634.1 944199 D 907240 CDS YP_005780635.1 385219160 12360715 946068..946691 1 NC_017371.1 putative restriction endonuclease 946691 12360715 HPGAM_04675 Helicobacter pylori Gambia94/24 putative restriction endonuclease YP_005780635.1 946068 D 907240 CDS YP_005780636.1 385219161 12360716 946672..947817 1 NC_017371.1 COG0827 Adenine-specific DNA methylase; adenine specific DNA methyltransferase 947817 12360716 HPGAM_04680 Helicobacter pylori Gambia94/24 adenine specific DNA methyltransferase YP_005780636.1 946672 D 907240 CDS YP_005780637.1 385219162 12360717 complement(950718..950813) 1 NC_017371.1 hypothetical protein 950813 12360717 HPGAM_04695 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780637.1 950718 R 907240 CDS YP_005780638.1 385219163 12360718 951010..952578 1 NC_017371.1 Outer membrane porin and adhesin HopC; putative signal peptide 952578 12360718 HPGAM_04700 Helicobacter pylori Gambia94/24 Outer membrane porin and adhesin HopC; putative signal peptide YP_005780638.1 951010 D 907240 CDS YP_005780639.1 385219164 12360719 952600..954183 1 NC_017371.1 Outer membrane protein/porin 954183 12360719 HPGAM_04705 Helicobacter pylori Gambia94/24 Outer membrane protein/porin YP_005780639.1 952600 D 907240 CDS YP_005780640.1 385219165 12360720 954390..954515 1 NC_017371.1 hypothetical protein 954515 12360720 HPGAM_04710 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780640.1 954390 D 907240 CDS YP_005780641.1 385219166 12360721 complement(954522..954626) 1 NC_017371.1 hypothetical protein 954626 12360721 HPGAM_04715 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780641.1 954522 R 907240 CDS YP_005780642.1 385219167 12360722 complement(954755..956299) 1 NC_017371.1 COG1190 Lysyl-tRNA synthetase (class II); putative Outer membrane protein 956299 12360722 HPGAM_04720 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780642.1 954755 R 907240 CDS YP_005780643.1 385219168 12360723 956478..956636 1 NC_017371.1 hypothetical protein 956636 12360723 HPGAM_04725 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780643.1 956478 D 907240 CDS YP_005780644.1 385219169 12360724 complement(959285..959716) 1 NC_017371.1 hypothetical protein 959716 12360724 HPGAM_04740 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780644.1 959285 R 907240 CDS YP_005780645.1 385219170 12360725 complement(959721..962978) 1 NC_017371.1 COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); carbamoyl phosphate synthase large subunit 962978 carB 12360725 carB Helicobacter pylori Gambia94/24 carbamoyl phosphate synthase large subunit YP_005780645.1 959721 R 907240 CDS YP_005780646.1 385219171 12360726 complement(963075..963767) 1 NC_017371.1 COG0670 Integral membrane protein, interacts with FtsH; hypothetical protein 963767 12360726 HPGAM_04750 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780646.1 963075 R 907240 CDS YP_005780647.1 385219172 12360727 963913..964911 1 NC_017371.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 964911 12360727 HPGAM_04755 Helicobacter pylori Gambia94/24 glyceraldehyde-3-phosphate dehydrogenase YP_005780647.1 963913 D 907240 CDS YP_005780648.1 385219173 12360728 964992..972581 1 NC_017371.1 putative toxin-like outer membrane protein/vacuolating cytotoxin (VacA)-like protein 972581 12360728 HPGAM_04760 Helicobacter pylori Gambia94/24 putative toxin-like outer membrane protein/vacuolating cytotoxin (VacA)-like protein YP_005780648.1 964992 D 907240 CDS YP_005780649.1 385219174 12360729 972634..973740 1 NC_017371.1 putative Outer membrane protein 973740 12360729 HPGAM_04765 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780649.1 972634 D 907240 CDS YP_005780650.1 385219175 12360730 complement(973811..974017) 1 NC_017371.1 COG1942 Uncharacterized protein, 4-oxalocrotonate tautomerase homolog; 4-oxalocrotonate tautomerase 974017 12360730 HPGAM_04770 Helicobacter pylori Gambia94/24 4-oxalocrotonate tautomerase YP_005780650.1 973811 R 907240 CDS YP_005780651.1 385219176 12360731 974152..974733 1 NC_017371.1 COG0353 Recombinational DNA repair protein (RecF pathway); recombination protein RecR 974733 recR 12360731 recR Helicobacter pylori Gambia94/24 recombination protein RecR YP_005780651.1 974152 D 907240 CDS YP_005780652.1 385219177 12360732 974730..975875 1 NC_017371.1 COG0585 Uncharacterized conserved protein; tRNA pseudouridine synthase D 975875 truD 12360732 truD Helicobacter pylori Gambia94/24 tRNA pseudouridine synthase D YP_005780652.1 974730 D 907240 CDS YP_005780653.1 385219178 12360733 975862..976794 1 NC_017371.1 COG0501 Zn-dependent protease with chaperone function; heat shock protein HtpX 976794 12360733 HPGAM_04785 Helicobacter pylori Gambia94/24 heat shock protein HtpX YP_005780653.1 975862 D 907240 CDS YP_005780654.1 385219179 12360734 976795..977337 1 NC_017371.1 COG0302 GTP cyclohydrolase I; GTP cyclohydrolase I 977337 folE 12360734 folE Helicobacter pylori Gambia94/24 GTP cyclohydrolase I YP_005780654.1 976795 D 907240 CDS YP_005780655.1 385219180 12360735 977353..978264 1 NC_017371.1 COG0142 Geranylgeranyl pyrophosphate synthase; geranyltranstransferase 978264 12360735 HPGAM_04795 Helicobacter pylori Gambia94/24 geranyltranstransferase YP_005780655.1 977353 D 907240 CDS YP_005780656.1 385219181 12360736 978261..979064 1 NC_017371.1 COG0496 Predicted acid phosphatase; 5'(3')-nucleotidase/polyphosphatase 979064 surE 12360736 surE Helicobacter pylori Gambia94/24 5'(3')-nucleotidase/polyphosphatase YP_005780656.1 978261 D 907240 CDS YP_005780657.1 385219182 12360737 979061..979720 1 NC_017371.1 hypothetical protein 979720 12360737 HPGAM_04805 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780657.1 979061 D 907240 CDS YP_005780658.1 385219183 12360738 979722..980324 1 NC_017371.1 COG0720 6-pyruvoyl-tetrahydropterin synthase; 6-carboxy-5,6,7,8-tetrahydropterin synthase 980324 12360738 HPGAM_04810 Helicobacter pylori Gambia94/24 6-carboxy-5,6,7,8-tetrahydropterin synthase YP_005780658.1 979722 D 907240 CDS YP_005780659.1 385219184 12360739 980321..981076 1 NC_017371.1 COG0602 Organic radical activating enzymes; hypothetical protein 981076 12360739 HPGAM_04815 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780659.1 980321 D 907240 CDS YP_005780660.1 385219185 12360740 981165..981650 1 NC_017371.1 COG0454 Histone acetyltransferase HPA2 and related acetyltransferases; hypothetical protein 981650 12360740 HPGAM_04820 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780660.1 981165 D 907240 CDS YP_005780661.1 385219186 12360741 981874..983862 1 NC_017371.1 putative outer membrane protein 983862 12360741 HPGAM_04825 Helicobacter pylori Gambia94/24 putative outer membrane protein YP_005780661.1 981874 D 907240 CDS YP_005780662.1 385219187 12360742 complement(984014..984121) 1 NC_017371.1 hypothetical protein 984121 12360742 HPGAM_04830 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780662.1 984014 R 907240 CDS YP_005780663.1 385219188 12360743 complement(984121..984213) 1 NC_017371.1 hypothetical protein 984213 12360743 HPGAM_04835 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780663.1 984121 R 907240 CDS YP_005780664.1 385219189 12360744 complement(984293..985672) 1 NC_017371.1 COG0477 Permeases of the major facilitator superfamily; proline/betaine transporter 985672 12360744 HPGAM_04840 Helicobacter pylori Gambia94/24 proline/betaine transporter YP_005780664.1 984293 R 907240 CDS YP_005780665.1 385219190 12360745 complement(985948..987666) 1 NC_017371.1 COG1479 Uncharacterized conserved protein; hypothetical protein 987666 12360745 HPGAM_04845 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780665.1 985948 R 907240 CDS YP_005780666.1 385219191 12360746 complement(987740..988453) 1 NC_017371.1 COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter, permease protein (yckJ) 988453 12360746 HPGAM_04850 Helicobacter pylori Gambia94/24 amino acid ABC transporter, permease protein (yckJ) YP_005780666.1 987740 R 907240 CDS YP_005780667.1 385219192 12360747 complement(988437..989210) 1 NC_017371.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter 989210 12360747 HPGAM_04855 Helicobacter pylori Gambia94/24 amino acid ABC transporter YP_005780667.1 988437 R 907240 CDS YP_005780668.1 385219193 12360748 complement(989276..990409) 1 NC_017371.1 COG0787 Alanine racemase; alanine racemase 990409 12360748 HPGAM_04860 Helicobacter pylori Gambia94/24 alanine racemase YP_005780668.1 989276 R 907240 CDS YP_005780669.1 385219194 12360749 complement(990416..991768) 1 NC_017371.1 COG1115 Na+/alanine symporter; putative sodium/alanine symporter 991768 12360749 HPGAM_04865 Helicobacter pylori Gambia94/24 putative sodium/alanine symporter YP_005780669.1 990416 R 907240 CDS YP_005780670.1 385219195 12360750 complement(991809..993041) 1 NC_017371.1 COG0665 Glycine/D-amino acid oxidases (deaminating); D-amino acid dehydrogenase 993041 12360750 HPGAM_04870 Helicobacter pylori Gambia94/24 D-amino acid dehydrogenase YP_005780670.1 991809 R 907240 CDS YP_005780671.1 385219196 12360751 complement(993064..993441) 1 NC_017371.1 COG0251 Putative translation initiation inhibitor, yjgF family; translation initiation inhibitor 993441 12360751 HPGAM_04875 Helicobacter pylori Gambia94/24 translation initiation inhibitor YP_005780671.1 993064 R 907240 CDS YP_005780672.1 385219197 12360752 993511..993636 1 NC_017371.1 hypothetical protein 993636 12360752 HPGAM_04880 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780672.1 993511 D 907240 CDS YP_005780673.1 385219198 12360757 994352..995833 1 NC_017371.1 COG1757 Na+/H+ antiporter; hypothetical protein 995833 12360757 HPGAM_04890 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780673.1 994352 D 907240 CDS YP_005780674.1 385219199 12360758 complement(995944..996051) 1 NC_017371.1 hypothetical protein 996051 12360758 HPGAM_04895 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780674.1 995944 R 907240 CDS YP_005780675.1 385219200 12360759 996156..996518 1 NC_017371.1 hypothetical protein 996518 12360759 HPGAM_04900 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780675.1 996156 D 907240 CDS YP_005780676.1 385219201 12360760 complement(996932..997945) 1 NC_017371.1 hypothetical protein 997945 12360760 HPGAM_04905 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780676.1 996932 R 907240 CDS YP_005780677.1 385219202 12360761 complement(997955..998407) 1 NC_017371.1 COG1576 Uncharacterized conserved protein; rRNA large subunit methyltransferase 998407 12360761 HPGAM_04910 Helicobacter pylori Gambia94/24 rRNA large subunit methyltransferase YP_005780677.1 997955 R 907240 CDS YP_005780678.1 385219203 12360762 complement(998421..999290) 1 NC_017371.1 COG0777 Acetyl-CoA carboxylase beta subunit; acetyl-CoA carboxylase subunit beta 999290 12360762 HPGAM_04915 Helicobacter pylori Gambia94/24 acetyl-CoA carboxylase subunit beta YP_005780678.1 998421 R 907240 CDS YP_005780679.1 385219204 12360763 999371..999985 1 NC_017371.1 COG0540 Aspartate carbamoyltransferase, catalytic chain; putative recombination protein RecO 999985 12360763 HPGAM_04920 Helicobacter pylori Gambia94/24 putative recombination protein RecO YP_005780679.1 999371 D 907240 CDS YP_005780680.1 385219205 12360764 999996..1000652 1 NC_017371.1 COG1546 Uncharacterized protein (competence- and mitomycin-induced); hypothetical protein 1000652 12360764 HPGAM_04925 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780680.1 999996 D 907240 CDS YP_005780681.1 385219206 12360765 complement(1000655..1001221) 1 NC_017371.1 hypothetical protein 1001221 12360765 HPGAM_04930 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780681.1 1000655 R 907240 CDS YP_005780682.1 385219207 12360766 complement(1001285..1001917) 1 NC_017371.1 COG0778 Nitroreductase; putative aldehyde dehydrogenase 1001917 12360766 HPGAM_04935 Helicobacter pylori Gambia94/24 putative aldehyde dehydrogenase YP_005780682.1 1001285 R 907240 CDS YP_005780683.1 385219208 12360767 complement(1001917..1002768) 1 NC_017371.1 COG0682 Prolipoprotein diacylglyceryltransferase; prolipoprotein diacylglyceryl transferase 1002768 12360767 HPGAM_04940 Helicobacter pylori Gambia94/24 prolipoprotein diacylglyceryl transferase YP_005780683.1 1001917 R 907240 CDS YP_005780684.1 385219209 12360768 complement(1002777..1003505) 1 NC_017371.1 COG0564 Pseudouridylate synthases, 23S RNA-specific; hypothetical protein 1003505 12360768 HPGAM_04945 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780684.1 1002777 R 907240 CDS YP_005780685.1 385219210 12360769 complement(1003523..1004704) 1 NC_017371.1 COG1519 3-deoxy-D-manno-octulosonic-acid transferase; 3-deoxy-D-manno-octulosonic-acid transferase 1004704 12360769 HPGAM_04950 Helicobacter pylori Gambia94/24 3-deoxy-D-manno-octulosonic-acid transferase YP_005780685.1 1003523 R 907240 CDS YP_005780686.1 385219211 12360770 complement(1004705..1005472) 1 NC_017371.1 COG1579 Zn-ribbon protein, possibly nucleic acid-binding; hypothetical protein 1005472 12360770 HPGAM_04955 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780686.1 1004705 R 907240 CDS YP_005780687.1 385219212 12360771 complement(1005482..1006213) 1 NC_017371.1 COG0327 Uncharacterized conserved protein; hypothetical protein 1006213 12360771 HPGAM_04960 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780687.1 1005482 R 907240 CDS YP_005780688.1 385219213 12360772 complement(1006215..1007111) 1 NC_017371.1 COG0752 Glycyl-tRNA synthetase, alpha subunit; glycyl-tRNA synthetase subunit alpha 1007111 glyQ 12360772 glyQ Helicobacter pylori Gambia94/24 glycyl-tRNA synthetase subunit alpha YP_005780688.1 1006215 R 907240 CDS YP_005780689.1 385219214 12360773 complement(1007125..1008063) 1 NC_017371.1 COG0240 Glycerol-3-phosphate dehydrogenase; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 1008063 gpsA 12360773 gpsA Helicobacter pylori Gambia94/24 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_005780689.1 1007125 R 907240 CDS YP_005780690.1 385219215 12360774 complement(1008340..1008591) 1 NC_017371.1 hypothetical protein 1008591 12360774 HPGAM_04975 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780690.1 1008340 R 907240 CDS YP_005780691.1 385219216 12360775 complement(1008605..1010242) 1 NC_017371.1 COG0699 Predicted GTPases (dynamin-related); putative ATPase 1010242 12360775 HPGAM_04980 Helicobacter pylori Gambia94/24 putative ATPase YP_005780691.1 1008605 R 907240 CDS YP_005780692.1 385219217 12360776 complement(1014554..1014691) 1 NC_017371.1 hypothetical protein 1014691 12360776 HPGAM_05010 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780692.1 1014554 R 907240 CDS YP_005780693.1 385219218 12360777 complement(1014714..1014995) 1 NC_017371.1 hypothetical protein 1014995 12360777 HPGAM_05015 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780693.1 1014714 R 907240 CDS YP_005780694.1 385219219 12360778 complement(1015011..1018070) 1 NC_017371.1 COG3696 Putative silver efflux pump; cobalt-zinc-cadmium resistance protein 1018070 12360778 HPGAM_05020 Helicobacter pylori Gambia94/24 cobalt-zinc-cadmium resistance protein YP_005780694.1 1015011 R 907240 CDS YP_005780695.1 385219220 12360779 complement(1018070..1019149) 1 NC_017371.1 COG0845 Membrane-fusion protein; putative cobalt-zinc-cadmium resistance protein, CzcB family; putative signal peptide 1019149 12360779 HPGAM_05025 Helicobacter pylori Gambia94/24 putative cobalt-zinc-cadmium resistance protein, CzcB family; putative signal peptide YP_005780695.1 1018070 R 907240 CDS YP_005780696.1 385219221 12360780 complement(1019146..1020429) 1 NC_017371.1 hypothetical protein 1020429 12360780 HPGAM_05030 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780696.1 1019146 R 907240 CDS YP_005780697.1 385219222 12360781 complement(1020419..1022524) 1 NC_017371.1 COG0751 Glycyl-tRNA synthetase, beta subunit; glycyl-tRNA synthetase subunit beta 1022524 glyS 12360781 glyS Helicobacter pylori Gambia94/24 glycyl-tRNA synthetase subunit beta YP_005780697.1 1020419 R 907240 CDS YP_005780698.1 385219223 12360782 1022643..1023731 1 NC_017371.1 hypothetical protein 1023731 12360782 HPGAM_05040 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780698.1 1022643 D 907240 CDS YP_005780699.1 385219224 12360783 1023744..1025219 1 NC_017371.1 COG0696 Phosphoglyceromutase; phosphoglyceromutase 1025219 12360783 HPGAM_05045 Helicobacter pylori Gambia94/24 phosphoglyceromutase YP_005780699.1 1023744 D 907240 CDS YP_005780700.1 385219225 12360784 1025234..1025515 1 NC_017371.1 COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 1025515 gatC 12360784 gatC Helicobacter pylori Gambia94/24 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_005780700.1 1025234 D 907240 CDS YP_005780701.1 385219226 12360785 complement(1025611..1026930) 1 NC_017371.1 COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1026930 12360785 HPGAM_05055 Helicobacter pylori Gambia94/24 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005780701.1 1025611 R 907240 CDS YP_005780702.1 385219227 12360786 1027060..1028523 1 NC_017371.1 COG0760 Parvulin-like peptidyl-prolyl isomerase; hypothetical protein 1028523 12360786 HPGAM_05060 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780702.1 1027060 D 907240 CDS YP_005780703.1 385219228 12360787 1028538..1030019 1 NC_017371.1 COG0849 Actin-like ATPase involved in cell division; cell division protein FtsA 1030019 12360787 HPGAM_05065 Helicobacter pylori Gambia94/24 cell division protein FtsA YP_005780703.1 1028538 D 907240 CDS YP_005780704.1 385219229 12360788 1030148..1031305 1 NC_017371.1 COG0206 Cell division GTPase; cell division protein FtsZ 1031305 12360788 HPGAM_05070 Helicobacter pylori Gambia94/24 cell division protein FtsZ YP_005780704.1 1030148 D 907240 CDS YP_005780705.1 385219230 12360789 complement(1033034..1033174) 1 NC_017371.1 hypothetical protein 1033174 12360789 HPGAM_05085 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780705.1 1033034 R 907240 CDS YP_005780706.1 385219231 12360790 complement(1033223..1034047) 1 NC_017371.1 COG0668 Small-conductance mechanosensitive channel; hypothetical protein 1034047 12360790 HPGAM_05090 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780706.1 1033223 R 907240 CDS YP_005780707.1 385219232 12360791 1034212..1034310 1 NC_017371.1 hypothetical protein 1034310 12360791 HPGAM_05095 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780707.1 1034212 D 907240 CDS YP_005780708.1 385219233 12360792 1034552..1036477 1 NC_017371.1 COG3451 Type IV secretory pathway, VirB4 components; DNA transfer protein 1036477 12360792 HPGAM_05100 Helicobacter pylori Gambia94/24 DNA transfer protein YP_005780708.1 1034552 D 907240 CDS YP_005780709.1 385219234 12360793 1036470..1038065 1 NC_017371.1 COG0550 Topoisomerase IA; topoisomerase I 1038065 12360793 HPGAM_05105 Helicobacter pylori Gambia94/24 topoisomerase I YP_005780709.1 1036470 D 907240 CDS YP_005780710.1 385219235 12360794 1038062..1039279 1 NC_017371.1 COG3504 Type IV secretory pathway, VirB9 components; conjugal plasmid transfer system protein 1039279 12360794 HPGAM_05110 Helicobacter pylori Gambia94/24 conjugal plasmid transfer system protein YP_005780710.1 1038062 D 907240 CDS YP_005780711.1 385219236 12360795 1039276..1040523 1 NC_017371.1 COG2948 Type IV secretory pathway, VirB10 components; competence protein 1040523 12360795 HPGAM_05115 Helicobacter pylori Gambia94/24 competence protein YP_005780711.1 1039276 D 907240 CDS YP_005780712.1 385219237 12360796 1040498..1040593 1 NC_017371.1 hypothetical protein 1040593 12360796 HPGAM_05120 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780712.1 1040498 D 907240 CDS YP_005780713.1 385219238 12360797 1040596..1040892 1 NC_017371.1 hypothetical protein 1040892 12360797 HPGAM_05125 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780713.1 1040596 D 907240 CDS YP_005780714.1 385219239 12360798 1040882..1041145 1 NC_017371.1 hypothetical protein 1041145 12360798 HPGAM_05130 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780714.1 1040882 D 907240 CDS YP_005780715.1 385219240 12360799 1041142..1041441 1 NC_017371.1 hypothetical protein 1041441 12360799 HPGAM_05135 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780715.1 1041142 D 907240 CDS YP_005780716.1 385219241 12360800 1041441..1042382 1 NC_017371.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; VirB11 type IV secretion ATPase 1042382 12360800 HPGAM_05140 Helicobacter pylori Gambia94/24 VirB11 type IV secretion ATPase YP_005780716.1 1041441 D 907240 CDS YP_005780717.1 385219242 12360801 1042379..1042834 1 NC_017371.1 hypothetical protein 1042834 12360801 HPGAM_05145 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780717.1 1042379 D 907240 CDS YP_005780718.1 385219243 12360802 1042831..1043121 1 NC_017371.1 hypothetical protein 1043121 12360802 HPGAM_05150 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780718.1 1042831 D 907240 CDS YP_005780719.1 385219244 12360803 1043122..1043679 1 NC_017371.1 hypothetical protein 1043679 12360803 HPGAM_05155 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780719.1 1043122 D 907240 CDS YP_005780720.1 385219245 12360804 1043680..1045428 1 NC_017371.1 COG3505 Type IV secretory pathway, VirD4 components; VirD4 coupling protein 1045428 12360804 HPGAM_05160 Helicobacter pylori Gambia94/24 VirD4 coupling protein YP_005780720.1 1043680 D 907240 CDS YP_005780721.1 385219246 12360805 complement(1045673..1045807) 1 NC_017371.1 COG3041 Uncharacterized protein conserved in bacteria; hypothetical protein 1045807 12360805 HPGAM_05165 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780721.1 1045673 R 907240 CDS YP_005780722.1 385219247 12360806 complement(1045948..1046262) 1 NC_017371.1 hypothetical protein 1046262 12360806 HPGAM_05170 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780722.1 1045948 R 907240 CDS YP_005780723.1 385219248 12360807 complement(1048593..1049771) 1 NC_017371.1 hypothetical protein 1049771 12360807 HPGAM_05185 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780723.1 1048593 R 907240 CDS YP_005780724.1 385219249 12360808 complement(1049815..1050099) 1 NC_017371.1 hypothetical protein 1050099 12360808 HPGAM_05190 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780724.1 1049815 R 907240 CDS YP_005780725.1 385219250 12360809 complement(1050182..1050838) 1 NC_017371.1 COG1192 ATPases involved in chromosome partitioning; chromosome partitioning protein ParA 1050838 12360809 HPGAM_05195 Helicobacter pylori Gambia94/24 chromosome partitioning protein ParA YP_005780725.1 1050182 R 907240 CDS YP_005780726.1 385219251 12360810 1059690..1059836 1 NC_017371.1 hypothetical protein 1059836 12360810 HPGAM_05210 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780726.1 1059690 D 907240 CDS YP_005780727.1 385219252 12360811 1062302..1064473 1 NC_017371.1 hypothetical protein 1064473 12360811 HPGAM_05235 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780727.1 1062302 D 907240 CDS YP_005780728.1 385219253 12360812 1064601..1064735 1 NC_017371.1 hypothetical protein 1064735 12360812 HPGAM_05240 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780728.1 1064601 D 907240 CDS YP_005780729.1 385219254 12360813 1064853..1065923 1 NC_017371.1 hypothetical protein 1065923 12360813 HPGAM_05245 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780729.1 1064853 D 907240 CDS YP_005780730.1 385219255 12360814 1066107..1066331 1 NC_017371.1 hypothetical protein 1066331 12360814 HPGAM_05250 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780730.1 1066107 D 907240 CDS YP_005780731.1 385219256 12360815 complement(1068198..1069271) 1 NC_017371.1 COG0582 Integrase; integrase/recombinase (XERCD family) protein 1069271 12360815 HPGAM_05275 Helicobacter pylori Gambia94/24 integrase/recombinase (XERCD family) protein YP_005780731.1 1068198 R 907240 CDS YP_005780732.1 385219257 12360818 1073860..1074300 1 NC_017371.1 hypothetical protein 1074300 12360818 HPGAM_05280 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780732.1 1073860 D 907240 CDS YP_005780733.1 385219258 12360819 1077393..1077611 1 NC_017371.1 COG1598 Uncharacterized conserved protein; hypothetical protein 1077611 12360819 HPGAM_05305 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780733.1 1077393 D 907240 CDS YP_005780734.1 385219259 12360820 1077604..1077798 1 NC_017371.1 COG1724 Predicted periplasmic or secreted lipoprotein; hypothetical protein 1077798 12360820 HPGAM_05310 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780734.1 1077604 D 907240 CDS YP_005780735.1 385219260 12360821 complement(1077872..1079719) 1 NC_017371.1 COG1166 Arginine decarboxylase (spermidine biosynthesis); arginine decarboxylase 1079719 12360821 HPGAM_05315 Helicobacter pylori Gambia94/24 arginine decarboxylase YP_005780735.1 1077872 R 907240 CDS YP_005780736.1 385219261 12360822 complement(1079733..1080902) 1 NC_017371.1 COG0438 Glycosyltransferase; putative polysaccharide biosynthesis protein 1080902 12360822 HPGAM_05320 Helicobacter pylori Gambia94/24 putative polysaccharide biosynthesis protein YP_005780736.1 1079733 R 907240 CDS YP_005780737.1 385219262 12360823 complement(1080907..1081335) 1 NC_017371.1 COG2050 Uncharacterized protein, possibly involved in aromatic compounds catabolism; hypothetical protein 1081335 12360823 HPGAM_05325 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780737.1 1080907 R 907240 CDS YP_005780738.1 385219263 12360824 complement(1081352..1082137) 1 NC_017371.1 COG0500 SAM-dependent methyltransferases; tRNA mo(5)U34 methyltransferase 1082137 12360824 HPGAM_05330 Helicobacter pylori Gambia94/24 tRNA mo(5)U34 methyltransferase YP_005780738.1 1081352 R 907240 CDS YP_005780739.1 385219264 12360825 complement(1082141..1083160) 1 NC_017371.1 hypothetical protein 1083160 12360825 HPGAM_05335 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780739.1 1082141 R 907240 CDS YP_005780740.1 385219265 12360826 complement(1083161..1085113) 1 NC_017371.1 COG0143 Methionyl-tRNA synthetase; methionyl-tRNA synthetase 1085113 12360826 HPGAM_05340 Helicobacter pylori Gambia94/24 methionyl-tRNA synthetase YP_005780740.1 1083161 R 907240 CDS YP_005780741.1 385219266 12360827 1085283..1086452 1 NC_017371.1 COG2230 Cyclopropane fatty acid synthase and related methyltransferases; cyclopropane fatty acid synthase 1086452 12360827 HPGAM_05345 Helicobacter pylori Gambia94/24 cyclopropane fatty acid synthase YP_005780741.1 1085283 D 907240 CDS YP_005780742.1 385219267 12360828 complement(1086462..1088333) 1 NC_017371.1 COG0668 Small-conductance mechanosensitive channel; hypothetical protein 1088333 12360828 HPGAM_05350 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780742.1 1086462 R 907240 CDS YP_005780743.1 385219268 12360829 1088425..1088550 1 NC_017371.1 hypothetical protein 1088550 12360829 HPGAM_05355 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780743.1 1088425 D 907240 CDS YP_005780744.1 385219269 12360830 complement(1088898..1088996) 1 NC_017371.1 hypothetical protein 1088996 12360830 HPGAM_05360 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780744.1 1088898 R 907240 CDS YP_005780745.1 385219270 12360835 complement(1089659..1090441) 1 NC_017371.1 hypothetical protein 1090441 12360835 HPGAM_05365 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780745.1 1089659 R 907240 CDS YP_005780746.1 385219271 12360836 complement(1090492..1092018) 1 NC_017371.1 COG0518 GMP synthase - Glutamine amidotransferase domain; GMP synthase 1092018 guaA 12360836 guaA Helicobacter pylori Gambia94/24 GMP synthase YP_005780746.1 1090492 R 907240 CDS YP_005780747.1 385219272 12360837 complement(1092015..1092509) 1 NC_017371.1 hypothetical protein 1092509 12360837 HPGAM_05375 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780747.1 1092015 R 907240 CDS YP_005780748.1 385219273 12360838 complement(1092674..1095064) 1 NC_017371.1 COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing; putative S/N-oxide reductase 1095064 12360838 HPGAM_05380 Helicobacter pylori Gambia94/24 putative S/N-oxide reductase YP_005780748.1 1092674 R 907240 CDS YP_005780749.1 385219274 12360839 complement(1095168..1095758) 1 NC_017371.1 COG2987 Urocanate hydratase; hypothetical protein 1095758 12360839 HPGAM_05385 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780749.1 1095168 R 907240 CDS YP_005780750.1 385219275 12360840 complement(1095784..1097106) 1 NC_017371.1 COG0520 Selenocysteine lyase; nifS-like protein 1097106 12360840 HPGAM_05390 Helicobacter pylori Gambia94/24 nifS-like protein YP_005780750.1 1095784 R 907240 CDS YP_005780751.1 385219276 12360841 complement(1097125..1097439) 1 NC_017371.1 COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases; Hit-like protein involved in cell-cycle regulation 1097439 12360841 HPGAM_05395 Helicobacter pylori Gambia94/24 Hit-like protein involved in cell-cycle regulation YP_005780751.1 1097125 R 907240 CDS YP_005780752.1 385219277 12360842 1097521..1098507 1 NC_017371.1 COG0016 Phenylalanyl-tRNA synthetase alpha subunit; phenylalanyl-tRNA synthetase subunit alpha 1098507 pheS 12360842 pheS Helicobacter pylori Gambia94/24 phenylalanyl-tRNA synthetase subunit alpha YP_005780752.1 1097521 D 907240 CDS YP_005780753.1 385219278 12360843 1098507..1100801 1 NC_017371.1 COG0073 EMAP domain; phenylalanyl-tRNA synthetase subunit beta 1100801 pheT 12360843 pheT Helicobacter pylori Gambia94/24 phenylalanyl-tRNA synthetase subunit beta YP_005780753.1 1098507 D 907240 CDS YP_005780754.1 385219279 12360844 1100817..1102106 1 NC_017371.1 COG0128 5-enolpyruvylshikimate-3-phosphate synthase; 3-phosphoshikimate 1-carboxyvinyltransferase 1102106 12360844 HPGAM_05410 Helicobacter pylori Gambia94/24 3-phosphoshikimate 1-carboxyvinyltransferase YP_005780754.1 1100817 D 907240 CDS YP_005780755.1 385219280 12360845 1102096..1102920 1 NC_017371.1 COG0761 Penicillin tolerance protein; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1102920 ispH 12360845 ispH Helicobacter pylori Gambia94/24 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_005780755.1 1102096 D 907240 CDS YP_005780756.1 385219281 12360846 1103042..1104700 1 NC_017371.1 COG0539 Ribosomal protein S1; 30S ribosomal protein S1 1104700 rpsA 12360846 rpsA Helicobacter pylori Gambia94/24 30S ribosomal protein S1 YP_005780756.1 1103042 D 907240 CDS YP_005780757.1 385219282 12360847 1104729..1105088 1 NC_017371.1 hypothetical protein 1105088 12360847 HPGAM_05425 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780757.1 1104729 D 907240 CDS YP_005780758.1 385219283 12360848 1105277..1106851 1 NC_017371.1 COG0111 Phosphoglycerate dehydrogenase and related dehydrogenases; D-3-phosphoglycerate dehydrogenase 1106851 12360848 HPGAM_05430 Helicobacter pylori Gambia94/24 D-3-phosphoglycerate dehydrogenase YP_005780758.1 1105277 D 907240 CDS YP_005780759.1 385219284 12360849 1106861..1108711 1 NC_017371.1 COG0043 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1108711 12360849 HPGAM_05435 Helicobacter pylori Gambia94/24 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_005780759.1 1106861 D 907240 CDS YP_005780760.1 385219285 12360850 1108734..1109402 1 NC_017371.1 COG0325 Predicted enzyme with a TIM-barrel fold; hypothetical protein 1109402 12360850 HPGAM_05440 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780760.1 1108734 D 907240 CDS YP_005780761.1 385219286 12360851 1109404..1110162 1 NC_017371.1 COG2908 Uncharacterized protein conserved in bacteria; UDP-2,3-diacylglucosamine hydrolase 1110162 12360851 HPGAM_05445 Helicobacter pylori Gambia94/24 UDP-2,3-diacylglucosamine hydrolase YP_005780761.1 1109404 D 907240 CDS YP_005780762.1 385219287 12360852 1110164..1111102 1 NC_017371.1 COG0835 Chemotaxis signal transduction protein; putative chemotaxis protein 1111102 12360852 HPGAM_05450 Helicobacter pylori Gambia94/24 putative chemotaxis protein YP_005780762.1 1110164 D 907240 CDS YP_005780763.1 385219288 12360853 1111159..1113591 1 NC_017371.1 COG0643 Chemotaxis protein histidine kinase and related kinases; histidine kinase 1113591 12360853 HPGAM_05455 Helicobacter pylori Gambia94/24 histidine kinase YP_005780763.1 1111159 D 907240 CDS YP_005780764.1 385219289 12360854 1113588..1114085 1 NC_017371.1 COG0835 Chemotaxis signal transduction protein; purine-binding chemotaxis protein CheW 1114085 12360854 HPGAM_05460 Helicobacter pylori Gambia94/24 purine-binding chemotaxis protein CheW YP_005780764.1 1113588 D 907240 CDS YP_005780765.1 385219290 12360855 complement(1114342..1114842) 1 NC_017371.1 COG2077 Peroxiredoxin; adhesin-thiol peroxidase 1114842 12360855 HPGAM_05465 Helicobacter pylori Gambia94/24 adhesin-thiol peroxidase YP_005780765.1 1114342 R 907240 CDS YP_005780766.1 385219291 12360856 1115064..1115705 1 NC_017371.1 COG0605 Superoxide dismutase; superoxide dismutase 1115705 12360856 HPGAM_05470 Helicobacter pylori Gambia94/24 superoxide dismutase YP_005780766.1 1115064 D 907240 CDS YP_005780767.1 385219292 12360857 1115759..1116490 1 NC_017371.1 COG0500 SAM-dependent methyltransferases; hypothetical protein 1116490 12360857 HPGAM_05475 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780767.1 1115759 D 907240 CDS YP_005780768.1 385219293 12360858 complement(1116552..1118411) 1 NC_017371.1 COG1198 Primosomal protein N' (replication factor Y) - superfamily II helicase; primosome assembly protein PriA 1118411 12360858 HPGAM_05480 Helicobacter pylori Gambia94/24 primosome assembly protein PriA YP_005780768.1 1116552 R 907240 CDS YP_005780769.1 385219294 12360859 complement(1118396..1118632) 1 NC_017371.1 hypothetical protein 1118632 12360859 HPGAM_05485 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780769.1 1118396 R 907240 CDS YP_005780770.1 385219295 12360860 complement(1118645..1118872) 1 NC_017371.1 COG0055 F0F1-type ATP synthase, beta subunit; hypothetical protein 1118872 12360860 HPGAM_05490 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780770.1 1118645 R 907240 CDS YP_005780771.1 385219296 12360861 1119072..1119818 1 NC_017371.1 hypothetical protein 1119818 12360861 HPGAM_05495 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780771.1 1119072 D 907240 CDS YP_005780772.1 385219297 12360862 complement(1120091..1120615) 1 NC_017371.1 hypothetical protein 1120615 12360862 HPGAM_05500 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780772.1 1120091 R 907240 CDS YP_005780773.1 385219298 12360863 1120795..1122018 1 NC_017371.1 COG0501 Zn-dependent protease with chaperone function; putative zinc-metallo protease 1122018 12360863 HPGAM_05505 Helicobacter pylori Gambia94/24 putative zinc-metallo protease YP_005780773.1 1120795 D 907240 CDS YP_005780774.1 385219299 12360864 1122015..1122845 1 NC_017371.1 COG2890 Methylase of polypeptide chain release factors; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1122845 12360864 HPGAM_05510 Helicobacter pylori Gambia94/24 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_005780774.1 1122015 D 907240 CDS YP_005780775.1 385219300 12360865 1122911..1124257 1 NC_017371.1 COG0334 Glutamate dehydrogenase/leucine dehydrogenase; glutamate dehydrogenase 1124257 12360865 HPGAM_05515 Helicobacter pylori Gambia94/24 glutamate dehydrogenase YP_005780775.1 1122911 D 907240 CDS YP_005780776.1 385219301 12360866 complement(1124271..1125554) 1 NC_017371.1 Alpha-(1,3)-fucosyltransferase 1125554 12360866 HPGAM_05520 Helicobacter pylori Gambia94/24 Alpha-(1,3)-fucosyltransferase YP_005780776.1 1124271 R 907240 CDS YP_005780777.1 385219302 12360867 complement(1125564..1128374) 1 NC_017371.1 COG1333 ResB protein required for cytochrome c biosynthesis; putative cytochrome C-type biogenesis protein 1128374 12360867 HPGAM_05525 Helicobacter pylori Gambia94/24 putative cytochrome C-type biogenesis protein YP_005780777.1 1125564 R 907240 CDS YP_005780778.1 385219303 12360868 complement(1128384..1129055) 1 NC_017371.1 COG2143 Thioredoxin-related protein; hypothetical protein 1129055 12360868 HPGAM_05530 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780778.1 1128384 R 907240 CDS YP_005780779.1 385219304 12360869 complement(1129129..1130136) 1 NC_017371.1 COG0276 Protoheme ferro-lyase (ferrochelatase); ferrochelatase 1130136 hemH 12360869 hemH Helicobacter pylori Gambia94/24 ferrochelatase YP_005780779.1 1129129 R 907240 CDS YP_005780780.1 385219305 12360870 1130192..1130623 1 NC_017371.1 hypothetical protein 1130623 12360870 HPGAM_05540 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780780.1 1130192 D 907240 CDS YP_005780781.1 385219306 12360871 1130624..1131304 1 NC_017371.1 COG1385 Uncharacterized protein conserved in bacteria; 16S ribosomal RNA methyltransferase RsmE 1131304 12360871 HPGAM_05545 Helicobacter pylori Gambia94/24 16S ribosomal RNA methyltransferase RsmE YP_005780781.1 1130624 D 907240 CDS YP_005780782.1 385219307 12360872 complement(1131388..1133643) 1 NC_017371.1 putative outer membrane protein 1133643 12360872 HPGAM_05550 Helicobacter pylori Gambia94/24 putative outer membrane protein YP_005780782.1 1131388 R 907240 CDS YP_005780783.1 385219308 12360873 complement(1133811..1134377) 1 NC_017371.1 COG0717 Deoxycytidine deaminase; deoxycytidine triphosphate deaminase 1134377 dcd 12360873 dcd Helicobacter pylori Gambia94/24 deoxycytidine triphosphate deaminase YP_005780783.1 1133811 R 907240 CDS YP_005780784.1 385219309 12360874 1134508..1134993 1 NC_017371.1 COG0511 Biotin carboxyl carrier protein; biotin carboxyl carrier protein 1134993 12360874 HPGAM_05560 Helicobacter pylori Gambia94/24 biotin carboxyl carrier protein YP_005780784.1 1134508 D 907240 CDS YP_005780785.1 385219310 12360875 1134999..1136366 1 NC_017371.1 COG0439 Biotin carboxylase; biotin carboxylase 1136366 12360875 HPGAM_05565 Helicobacter pylori Gambia94/24 biotin carboxylase YP_005780785.1 1134999 D 907240 CDS YP_005780786.1 385219311 12360876 1137548..1138510 1 NC_017371.1 COG1015 Phosphopentomutase; putative adenine methyltransferase 1138510 12360876 HPGAM_05580 Helicobacter pylori Gambia94/24 putative adenine methyltransferase YP_005780786.1 1137548 D 907240 CDS YP_005780787.1 385219312 12360877 1138510..1139058 1 NC_017371.1 hypothetical protein 1139058 12360877 HPGAM_05585 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780787.1 1138510 D 907240 CDS YP_005780788.1 385219313 12360878 1139151..1139756 1 NC_017371.1 hypothetical protein 1139756 12360878 HPGAM_05590 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780788.1 1139151 D 907240 CDS YP_005780789.1 385219314 12360879 1139753..1140889 1 NC_017371.1 COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase 1140889 12360879 HPGAM_05595 Helicobacter pylori Gambia94/24 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase YP_005780789.1 1139753 D 907240 CDS YP_005780790.1 385219315 12360881 1141279..1142304 1 NC_017371.1 COG0208 Ribonucleotide reductase, beta subunit; ribonucleotide-diphosphate reductase subunit beta 1142304 nrdF 12360881 nrdF Helicobacter pylori Gambia94/24 ribonucleotide-diphosphate reductase subunit beta YP_005780790.1 1141279 D 907240 CDS YP_005780791.1 385219316 12360882 1142314..1142943 1 NC_017371.1 COG2518 Protein-L-isoaspartate carboxylmethyltransferase; protein-L-isoaspartate O-methyltransferase 1142943 pcm 12360882 pcm Helicobacter pylori Gambia94/24 protein-L-isoaspartate O-methyltransferase YP_005780791.1 1142314 D 907240 CDS YP_005780792.1 385219317 12360883 1142965..1144002 1 NC_017371.1 COG0795 Predicted permeases; hypothetical protein 1144002 12360883 HPGAM_05615 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780792.1 1142965 D 907240 CDS YP_005780793.1 385219318 12360884 1144003..1144731 1 NC_017371.1 COG0101 Pseudouridylate synthase; tRNA pseudouridine synthase A 1144731 truA 12360884 truA Helicobacter pylori Gambia94/24 tRNA pseudouridine synthase A YP_005780793.1 1144003 D 907240 CDS YP_005780794.1 385219319 12360885 complement(1144725..1145759) 1 NC_017371.1 COG1087 UDP-glucose 4-epimerase; UDP-glucose 4-epimerase 1145759 12360885 HPGAM_05625 Helicobacter pylori Gambia94/24 UDP-glucose 4-epimerase YP_005780794.1 1144725 R 907240 CDS YP_005780795.1 385219320 12360888 1146680..1148215 1 NC_017371.1 putative Outer membrane protein 1148215 12360888 HPGAM_05635 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780795.1 1146680 D 907240 CDS YP_005780796.1 385219321 12360889 1148233..1148985 1 NC_017371.1 COG4221 Short-chain alcohol dehydrogenase of unknown specificity; short chain alcohol dehydrogenase 1148985 12360889 HPGAM_05640 Helicobacter pylori Gambia94/24 short chain alcohol dehydrogenase YP_005780796.1 1148233 D 907240 CDS YP_005780797.1 385219322 12360890 complement(1149189..1150061) 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 1150061 12360890 HPGAM_05645 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780797.1 1149189 R 907240 CDS YP_005780798.1 385219323 12360891 complement(1150131..1150757) 1 NC_017371.1 COG0800 2-keto-3-deoxy-6-phosphogluconate aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase 1150757 12360891 HPGAM_05650 Helicobacter pylori Gambia94/24 2-keto-3-deoxy-6-phosphogluconate aldolase YP_005780798.1 1150131 R 907240 CDS YP_005780799.1 385219324 12360892 complement(1150776..1152602) 1 NC_017371.1 COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; phosphogluconate dehydratase 1152602 12360892 HPGAM_05655 Helicobacter pylori Gambia94/24 phosphogluconate dehydratase YP_005780799.1 1150776 R 907240 CDS YP_005780800.1 385219325 12360893 1152668..1153945 1 NC_017371.1 COG0364 Glucose-6-phosphate 1-dehydrogenase; glucose-6-phosphate 1-dehydrogenase 1153945 12360893 HPGAM_05660 Helicobacter pylori Gambia94/24 glucose-6-phosphate 1-dehydrogenase YP_005780800.1 1152668 D 907240 CDS YP_005780801.1 385219326 12360894 1153956..1154639 1 NC_017371.1 COG0363 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase; 6-phosphogluconolactonase 1154639 12360894 HPGAM_05665 Helicobacter pylori Gambia94/24 6-phosphogluconolactonase YP_005780801.1 1153956 D 907240 CDS YP_005780802.1 385219327 12360895 1154626..1155636 1 NC_017371.1 COG0837 Glucokinase; glucokinase 1155636 glk 12360895 glk Helicobacter pylori Gambia94/24 glucokinase YP_005780802.1 1154626 D 907240 CDS YP_005780803.1 385219328 12360896 1155798..1156850 1 NC_017371.1 COG1064 Zn-dependent alcohol dehydrogenases; zinc-dependent alcohol dehydrogenase 1156850 12360896 HPGAM_05675 Helicobacter pylori Gambia94/24 zinc-dependent alcohol dehydrogenase YP_005780803.1 1155798 D 907240 CDS YP_005780804.1 385219329 12360897 complement(1156862..1158028) 1 NC_017371.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; putative lipopolysaccharide biosynthesis protein 1158028 12360897 HPGAM_05680 Helicobacter pylori Gambia94/24 putative lipopolysaccharide biosynthesis protein YP_005780804.1 1156862 R 907240 CDS YP_005780805.1 385219330 12360898 complement(1158162..1159358) 1 NC_017371.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide biosynthesis protein 1159358 12360898 HPGAM_05685 Helicobacter pylori Gambia94/24 lipopolysaccharide biosynthesis protein YP_005780805.1 1158162 R 907240 CDS YP_005780806.1 385219331 12360899 complement(1159386..1159598) 1 NC_017371.1 hypothetical protein 1159598 12360899 HPGAM_05690 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780806.1 1159386 R 907240 CDS YP_005780807.1 385219332 12360900 1159546..1160853 1 NC_017371.1 hypothetical protein 1160853 12360900 HPGAM_05695 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780807.1 1159546 D 907240 CDS YP_005780808.1 385219333 12360901 complement(1160860..1161522) 1 NC_017371.1 putative Outer membrane protein 1161522 12360901 HPGAM_05700 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780808.1 1160860 R 907240 CDS YP_005780809.1 385219334 12360902 complement(1161615..1161737) 1 NC_017371.1 hypothetical protein 1161737 12360902 HPGAM_05705 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780809.1 1161615 R 907240 CDS YP_005780810.1 385219335 12360903 1161811..1162371 1 NC_017371.1 COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit; pyruvate flavodoxin oxidoreductase subunit gamma 1162371 12360903 HPGAM_05710 Helicobacter pylori Gambia94/24 pyruvate flavodoxin oxidoreductase subunit gamma YP_005780810.1 1161811 D 907240 CDS YP_005780811.1 385219336 12360904 1162387..1162779 1 NC_017371.1 COG1144 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, delta subunit; pyruvate flavodoxin oxidoreductase subunit delta 1162779 porD 12360904 porD Helicobacter pylori Gambia94/24 pyruvate flavodoxin oxidoreductase subunit delta YP_005780811.1 1162387 D 907240 CDS YP_005780812.1 385219337 12360905 1162789..1164012 1 NC_017371.1 COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit; pyruvate flavodoxin oxidoreductase subunit alpha 1164012 porA 12360905 porA Helicobacter pylori Gambia94/24 pyruvate flavodoxin oxidoreductase subunit alpha YP_005780812.1 1162789 D 907240 CDS YP_005780813.1 385219338 12360906 1164025..1164969 1 NC_017371.1 COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit; pyruvate ferredoxin oxidoreductase subunit beta 1164969 12360906 HPGAM_05725 Helicobacter pylori Gambia94/24 pyruvate ferredoxin oxidoreductase subunit beta YP_005780813.1 1164025 D 907240 CDS YP_005780814.1 385219339 12360907 1165075..1166397 1 NC_017371.1 COG0015 Adenylosuccinate lyase; adenylosuccinate lyase 1166397 12360907 HPGAM_05730 Helicobacter pylori Gambia94/24 adenylosuccinate lyase YP_005780814.1 1165075 D 907240 CDS YP_005780815.1 385219340 12360908 1166695..1167528 1 NC_017371.1 putative Outer membrane protein 1167528 12360908 HPGAM_05735 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780815.1 1166695 D 907240 CDS YP_005780816.1 385219341 12360909 complement(1167553..1169529) 1 NC_017371.1 COG0556 Helicase subunit of the DNA excision repair complex; excinuclease ABC subunit B 1169529 12360909 HPGAM_05740 Helicobacter pylori Gambia94/24 excinuclease ABC subunit B YP_005780816.1 1167553 R 907240 CDS YP_005780817.1 385219342 12360910 complement(1169578..1170315) 1 NC_017371.1 hypothetical protein 1170315 12360910 HPGAM_05745 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780817.1 1169578 R 907240 CDS YP_005780818.1 385219343 12360911 complement(1170412..1173885) 1 NC_017371.1 hypothetical protein 1173885 12360911 HPGAM_05750 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780818.1 1170412 R 907240 CDS YP_005780819.1 385219344 12360912 1174069..1174230 1 NC_017371.1 hypothetical protein 1174230 12360912 HPGAM_05755 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780819.1 1174069 D 907240 CDS YP_005780820.1 385219345 12360913 complement(1174314..1175084) 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 1175084 12360913 HPGAM_05760 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780820.1 1174314 R 907240 CDS YP_005780821.1 385219346 12360914 complement(1175325..1177028) 1 NC_017371.1 COG0405 Gamma-glutamyltransferase; gamma-glutamyltranspeptidase 1177028 12360914 HPGAM_05765 Helicobacter pylori Gambia94/24 gamma-glutamyltranspeptidase YP_005780821.1 1175325 R 907240 CDS YP_005780822.1 385219347 12360915 complement(1177216..1179036) 1 NC_017371.1 COG1256 Flagellar hook-associated protein; flagellar hook-associated protein FlgK 1179036 flgK 12360915 flgK Helicobacter pylori Gambia94/24 flagellar hook-associated protein FlgK YP_005780822.1 1177216 R 907240 CDS YP_005780823.1 385219348 12360916 complement(1179038..1179472) 1 NC_017371.1 hypothetical protein 1179472 12360916 HPGAM_05775 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780823.1 1179038 R 907240 CDS YP_005780824.1 385219349 12360917 complement(1179604..1180560) 1 NC_017371.1 COG0270 Site-specific DNA methylase; type II DNA modification (methyltransferase) 1180560 12360917 HPGAM_05780 Helicobacter pylori Gambia94/24 type II DNA modification (methyltransferase) YP_005780824.1 1179604 R 907240 CDS YP_005780825.1 385219350 12360918 complement(1180704..1180907) 1 NC_017371.1 hypothetical protein 1180907 12360918 HPGAM_05785 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780825.1 1180704 R 907240 CDS YP_005780826.1 385219351 12360919 complement(1180976..1181182) 1 NC_017371.1 hypothetical protein 1181182 12360919 HPGAM_05790 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780826.1 1180976 R 907240 CDS YP_005780827.1 385219352 12360920 complement(1181217..1181774) 1 NC_017371.1 COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2; FKBP-type peptidyl-prolyl cis-trans isomerase slyD 1181774 12360920 HPGAM_05795 Helicobacter pylori Gambia94/24 FKBP-type peptidyl-prolyl cis-trans isomerase slyD YP_005780827.1 1181217 R 907240 CDS YP_005780828.1 385219353 12360921 complement(1181761..1182756) 1 NC_017371.1 hypothetical protein 1182756 12360921 HPGAM_05800 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780828.1 1181761 R 907240 CDS YP_005780829.1 385219354 12360922 complement(1182764..1183303) 1 NC_017371.1 COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins; peptidoglycan-associated lipoprotein 1183303 12360922 HPGAM_05805 Helicobacter pylori Gambia94/24 peptidoglycan-associated lipoprotein YP_005780829.1 1182764 R 907240 CDS YP_005780830.1 385219355 12360923 complement(1183370..1184623) 1 NC_017371.1 COG0823 Periplasmic component of the Tol biopolymer transport system; translocation protein TolB 1184623 tolB 12360923 tolB Helicobacter pylori Gambia94/24 translocation protein TolB YP_005780830.1 1183370 R 907240 CDS YP_005780831.1 385219356 12360924 complement(1184620..1185414) 1 NC_017371.1 hypothetical protein 1185414 12360924 HPGAM_05815 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780831.1 1184620 R 907240 CDS YP_005780832.1 385219357 12360925 complement(1185433..1185834) 1 NC_017371.1 COG0848 Biopolymer transport protein; biopolymer transport protein 1185834 12360925 HPGAM_05820 Helicobacter pylori Gambia94/24 biopolymer transport protein YP_005780832.1 1185433 R 907240 CDS YP_005780833.1 385219358 12360926 complement(1185878..1186456) 1 NC_017371.1 COG0811 Biopolymer transport proteins; biopolymer transport protein 1186456 12360926 HPGAM_05825 Helicobacter pylori Gambia94/24 biopolymer transport protein YP_005780833.1 1185878 R 907240 CDS YP_005780834.1 385219359 12360927 complement(1186468..1186839) 1 NC_017371.1 COG0355 F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit); F0F1 ATP synthase subunit epsilon 1186839 atpC 12360927 atpC Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit epsilon YP_005780834.1 1186468 R 907240 CDS YP_005780835.1 385219360 12360928 complement(1186850..1188259) 1 NC_017371.1 COG0055 F0F1-type ATP synthase, beta subunit; F0F1 ATP synthase subunit beta 1188259 12360928 HPGAM_05835 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit beta YP_005780835.1 1186850 R 907240 CDS YP_005780836.1 385219361 12360929 complement(1188281..1189186) 1 NC_017371.1 COG0224 F0F1-type ATP synthase, gamma subunit; F0F1 ATP synthase subunit gamma 1189186 12360929 HPGAM_05840 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit gamma YP_005780836.1 1188281 R 907240 CDS YP_005780837.1 385219362 12360930 complement(1189201..1190712) 1 NC_017371.1 COG0056 F0F1-type ATP synthase, alpha subunit; F0F1 ATP synthase subunit alpha 1190712 12360930 HPGAM_05845 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit alpha YP_005780837.1 1189201 R 907240 CDS YP_005780838.1 385219363 12360931 complement(1190735..1191277) 1 NC_017371.1 F0F1 ATP synthase subunit delta 1191277 12360931 HPGAM_05850 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit delta YP_005780838.1 1190735 R 907240 CDS YP_005780839.1 385219364 12360932 complement(1191278..1191793) 1 NC_017371.1 COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B 1191793 12360932 HPGAM_05855 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit B YP_005780839.1 1191278 R 907240 CDS YP_005780840.1 385219365 12360933 complement(1191797..1192231) 1 NC_017371.1 COG0711 F0F1-type ATP synthase, subunit b; F0F1 ATP synthase subunit B' 1192231 12360933 HPGAM_05860 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit B' YP_005780840.1 1191797 R 907240 CDS YP_005780841.1 385219366 12360934 complement(1192336..1193208) 1 NC_017371.1 COG1475 Predicted transcriptional regulators; plasmid replication-partition related protein 1193208 12360934 HPGAM_05865 Helicobacter pylori Gambia94/24 plasmid replication-partition related protein YP_005780841.1 1192336 R 907240 CDS YP_005780842.1 385219367 12360935 complement(1193212..1194006) 1 NC_017371.1 COG1192 ATPases involved in chromosome partitioning; hypothetical protein 1194006 12360935 HPGAM_05870 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780842.1 1193212 R 907240 CDS YP_005780843.1 385219368 12360936 complement(1194009..1194647) 1 NC_017371.1 COG0340 Biotin-(acetyl-CoA carboxylase) ligase; biotin--protein ligase 1194647 12360936 HPGAM_05875 Helicobacter pylori Gambia94/24 biotin--protein ligase YP_005780843.1 1194009 R 907240 CDS YP_005780844.1 385219369 12360937 complement(1194644..1195561) 1 NC_017371.1 COG0223 Methionyl-tRNA formyltransferase; methionyl-tRNA formyltransferase 1195561 fmt 12360937 fmt Helicobacter pylori Gambia94/24 methionyl-tRNA formyltransferase YP_005780844.1 1194644 R 907240 CDS YP_005780845.1 385219370 12360938 complement(1195576..1197849) 1 NC_017371.1 COG4694 Uncharacterized protein conserved in bacteria; hypothetical protein 1197849 12360938 HPGAM_05885 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780845.1 1195576 R 907240 CDS YP_005780846.1 385219371 12360939 complement(1197893..1199185) 1 NC_017371.1 COG4487 Uncharacterized protein conserved in bacteria; hypothetical protein 1199185 12360939 HPGAM_05890 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780846.1 1197893 R 907240 CDS YP_005780847.1 385219372 12360941 complement(1202760..1202870) 1 NC_017371.1 hypothetical protein 1202870 12360941 HPGAM_05905 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780847.1 1202760 R 907240 CDS YP_005780848.1 385219373 12360942 complement(1203073..1203789) 1 NC_017371.1 COG1432 Uncharacterized conserved protein; hypothetical protein 1203789 12360942 HPGAM_05910 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780848.1 1203073 R 907240 CDS YP_005780849.1 385219374 12360943 1204147..1204314 1 NC_017371.1 hypothetical protein 1204314 12360943 HPGAM_05915 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780849.1 1204147 D 907240 CDS YP_005780850.1 385219375 12360944 complement(1204383..1204739) 1 NC_017371.1 COG0335 Ribosomal protein L19; 50S ribosomal protein L19 1204739 rplS 12360944 rplS Helicobacter pylori Gambia94/24 50S ribosomal protein L19 YP_005780850.1 1204383 R 907240 CDS YP_005780851.1 385219376 12360945 complement(1204761..1205450) 1 NC_017371.1 COG0336 tRNA-(guanine-N1)-methyltransferase; tRNA (guanine-N(1)-)-methyltransferase 1205450 trmD 12360945 trmD Helicobacter pylori Gambia94/24 tRNA (guanine-N(1)-)-methyltransferase YP_005780851.1 1204761 R 907240 CDS YP_005780852.1 385219377 12360946 complement(1205451..1206005) 1 NC_017371.1 COG0806 RimM protein, required for 16S rRNA processing; 16S rRNA-processing protein RimM 1206005 rimM 12360946 rimM Helicobacter pylori Gambia94/24 16S rRNA-processing protein RimM YP_005780852.1 1205451 R 907240 CDS YP_005780853.1 385219378 12360947 complement(1206006..1206359) 1 NC_017371.1 COG1837 Predicted RNA-binding protein (contains KH domain); hypothetical protein 1206359 12360947 HPGAM_05935 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780853.1 1206006 R 907240 CDS YP_005780854.1 385219379 12360948 complement(1206376..1206606) 1 NC_017371.1 COG0228 Ribosomal protein S16; 30S ribosomal protein S16 1206606 rpsP 12360948 rpsP Helicobacter pylori Gambia94/24 30S ribosomal protein S16 YP_005780854.1 1206376 R 907240 CDS YP_005780855.1 385219380 12360949 complement(1206680..1208026) 1 NC_017371.1 COG0541 Signal recognition particle GTPase; signal recognition particle protein 1208026 12360949 HPGAM_05945 Helicobacter pylori Gambia94/24 signal recognition particle protein YP_005780855.1 1206680 R 907240 CDS YP_005780856.1 385219381 12360950 complement(1208041..1210659) 1 NC_017371.1 COG0525 Valyl-tRNA synthetase; valyl-tRNA synthetase 1210659 valS 12360950 valS Helicobacter pylori Gambia94/24 valyl-tRNA synthetase YP_005780856.1 1208041 R 907240 CDS YP_005780857.1 385219382 12360951 1210811..1211218 1 NC_017371.1 COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1211218 12360951 HPGAM_05955 Helicobacter pylori Gambia94/24 flagellar assembly protein FliW YP_005780857.1 1210811 D 907240 CDS YP_005780858.1 385219383 12360952 1211229..1212290 1 NC_017371.1 COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1212290 murG 12360952 murG Helicobacter pylori Gambia94/24 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_005780858.1 1211229 D 907240 CDS YP_005780859.1 385219384 12360953 complement(1212334..1212432) 1 NC_017371.1 hypothetical protein 1212432 12360953 HPGAM_05965 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780859.1 1212334 R 907240 CDS YP_005780860.1 385219385 12360954 1212398..1214494 1 NC_017371.1 outer membrane protein HopI 1214494 12360954 HPGAM_05970 Helicobacter pylori Gambia94/24 outer membrane protein HopI YP_005780860.1 1212398 D 907240 CDS YP_005780861.1 385219386 12360955 1214518..1218192 1 NC_017371.1 putative Outer membrane protein 1218192 12360955 HPGAM_05975 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005780861.1 1214518 D 907240 CDS YP_005780862.1 385219387 12360956 1218205..1219002 1 NC_017371.1 COG0345 Pyrroline-5-carboxylate reductase; pyrroline-5-carboxylate reductase 1219002 12360956 HPGAM_05980 Helicobacter pylori Gambia94/24 pyrroline-5-carboxylate reductase YP_005780862.1 1218205 D 907240 CDS YP_005780863.1 385219388 12360957 complement(1219767..1220192) 1 NC_017371.1 COG0319 Predicted metal-dependent hydrolase; metal-binding heat shock protein 1220192 12360957 HPGAM_05995 Helicobacter pylori Gambia94/24 metal-binding heat shock protein YP_005780863.1 1219767 R 907240 CDS YP_005780864.1 385219389 12360958 complement(1220249..1220743) 1 NC_017371.1 COG0716 Flavodoxins; flavodoxin FldA 1220743 12360958 HPGAM_06000 Helicobacter pylori Gambia94/24 flavodoxin FldA YP_005780864.1 1220249 R 907240 CDS YP_005780865.1 385219390 12360959 complement(1220835..1221416) 1 NC_017371.1 COG0586 Uncharacterized membrane-associated protein; hypothetical protein 1221416 12360959 HPGAM_06005 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780865.1 1220835 R 907240 CDS YP_005780866.1 385219391 12360960 1221554..1221751 1 NC_017371.1 COG3197 Uncharacterized protein, possibly involved in nitrogen fixation; cation transport subunit forcbb3-type oxidase 1221751 12360960 HPGAM_06010 Helicobacter pylori Gambia94/24 cation transport subunit forcbb3-type oxidase YP_005780866.1 1221554 D 907240 CDS YP_005780867.1 385219392 12360961 1221777..1222751 1 NC_017371.1 COG0492 Thioredoxin reductase; thioredoxin reductase 1222751 12360961 HPGAM_06015 Helicobacter pylori Gambia94/24 thioredoxin reductase YP_005780867.1 1221777 D 907240 CDS YP_005780868.1 385219393 12360962 complement(1222758..1223918) 1 NC_017371.1 COG0477 Permeases of the major facilitator superfamily; tetracycline resistance proteintet A (P ) 1223918 12360962 HPGAM_06020 Helicobacter pylori Gambia94/24 tetracycline resistance proteintet A (P ) YP_005780868.1 1222758 R 907240 CDS YP_005780869.1 385219394 12360963 1223982..1225619 1 NC_017371.1 COG0166 Glucose-6-phosphate isomerase; glucose-6-phosphate isomerase 1225619 pgi 12360963 pgi Helicobacter pylori Gambia94/24 glucose-6-phosphate isomerase YP_005780869.1 1223982 D 907240 CDS YP_005780870.1 385219395 12360964 1225925..1227340 1 NC_017371.1 Outer membrane protein HofH; putative signal peptide 1227340 12360964 HPGAM_06030 Helicobacter pylori Gambia94/24 Outer membrane protein HofH; putative signal peptide YP_005780870.1 1225925 D 907240 CDS YP_005780871.1 385219396 12360965 1227647..1227751 1 NC_017371.1 hypothetical protein 1227751 12360965 HPGAM_06035 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780871.1 1227647 D 907240 CDS YP_005780872.1 385219397 12360966 complement(1227861..1229924) 1 NC_017371.1 COG1966 Carbon starvation protein, predicted membrane protein; carbon starvation protein 1229924 12360966 HPGAM_06040 Helicobacter pylori Gambia94/24 carbon starvation protein YP_005780872.1 1227861 R 907240 CDS YP_005780873.1 385219398 12360967 1230133..1230786 1 NC_017371.1 COG0765 ABC-type amino acid transport system, permease component; amino acid ABC transporter permease 1230786 12360967 HPGAM_06045 Helicobacter pylori Gambia94/24 amino acid ABC transporter permease YP_005780873.1 1230133 D 907240 CDS YP_005780874.1 385219399 12360968 1230788..1231459 1 NC_017371.1 COG0765 ABC-type amino acid transport system, permease component; glutamine ABC transporter, permease protein 1231459 12360968 HPGAM_06050 Helicobacter pylori Gambia94/24 glutamine ABC transporter, permease protein YP_005780874.1 1230788 D 907240 CDS YP_005780875.1 385219400 12360969 1231461..1232207 1 NC_017371.1 COG1126 ABC-type polar amino acid transport system, ATPase component; phosphate ABC transporter ATP-binding protein 1232207 12360969 HPGAM_06055 Helicobacter pylori Gambia94/24 phosphate ABC transporter ATP-binding protein YP_005780875.1 1231461 D 907240 CDS YP_005780876.1 385219401 12360970 1232256..1233089 1 NC_017371.1 COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain; amino acid ABC transporter 1233089 12360970 HPGAM_06060 Helicobacter pylori Gambia94/24 amino acid ABC transporter YP_005780876.1 1232256 D 907240 CDS YP_005780877.1 385219402 12360971 1233210..1233767 1 NC_017371.1 hypothetical protein 1233767 12360971 HPGAM_06065 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780877.1 1233210 D 907240 CDS YP_005780878.1 385219403 12360972 complement(1233997..1235220) 1 NC_017371.1 COG0738 Fucose permease; glucose/galactose transporter 1235220 12360972 HPGAM_06070 Helicobacter pylori Gambia94/24 glucose/galactose transporter YP_005780878.1 1233997 R 907240 CDS YP_005780879.1 385219404 12360973 complement(1235349..1236656) 1 NC_017371.1 COG2252 Permeases; hypothetical protein 1236656 12360973 HPGAM_06075 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780879.1 1235349 R 907240 CDS YP_005780880.1 385219405 12360974 1236842..1236994 1 NC_017371.1 hypothetical protein 1236994 12360974 HPGAM_06080 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780880.1 1236842 D 907240 CDS YP_005780881.1 385219406 12360975 1236991..1237086 1 NC_017371.1 hypothetical protein 1237086 12360975 HPGAM_06085 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780881.1 1236991 D 907240 CDS YP_005780882.1 385219407 12360976 complement(1237098..1239002) 1 NC_017371.1 Outer membrane protein HopQ; putative signal peptide 1239002 12360976 HPGAM_06090 Helicobacter pylori Gambia94/24 Outer membrane protein HopQ; putative signal peptide YP_005780882.1 1237098 R 907240 CDS YP_005780883.1 385219408 12360977 1239250..1239342 1 NC_017371.1 hypothetical protein 1239342 12360977 HPGAM_06095 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780883.1 1239250 D 907240 CDS YP_005780884.1 385219409 12360978 1239378..1239473 1 NC_017371.1 hypothetical protein 1239473 12360978 HPGAM_06100 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780884.1 1239378 D 907240 CDS YP_005780885.1 385219410 12360979 complement(1239481..1240182) 1 NC_017371.1 COG0813 Purine-nucleoside phosphorylase; purine-nucleoside phosphorylase 1240182 12360979 HPGAM_06105 Helicobacter pylori Gambia94/24 purine-nucleoside phosphorylase YP_005780885.1 1239481 R 907240 CDS YP_005780886.1 385219411 12360980 complement(1240179..1241420) 1 NC_017371.1 COG1015 Phosphopentomutase; phosphopentomutase 1241420 12360980 HPGAM_06110 Helicobacter pylori Gambia94/24 phosphopentomutase YP_005780886.1 1240179 R 907240 CDS YP_005780887.1 385219412 12360981 complement(1241432..1242688) 1 NC_017371.1 COG1972 Nucleoside permease; putative nucleoside transporter 1242688 12360981 HPGAM_06115 Helicobacter pylori Gambia94/24 putative nucleoside transporter YP_005780887.1 1241432 R 907240 CDS YP_005780888.1 385219413 12360983 1243012..1244343 1 NC_017371.1 COG0477 Permeases of the major facilitator superfamily; multidrug-efflux transporter 1244343 12360983 HPGAM_06120 Helicobacter pylori Gambia94/24 multidrug-efflux transporter YP_005780888.1 1243012 D 907240 CDS YP_005780889.1 385219414 12360984 1244363..1245124 1 NC_017371.1 COG0037 Predicted ATPase of the PP-loop superfamily implicated in cell cycle control; hypothetical protein 1245124 12360984 HPGAM_06125 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780889.1 1244363 D 907240 CDS YP_005780890.1 385219415 12360985 complement(1245134..1246285) 1 NC_017371.1 COG0475 Kef-type K+ transport systems, membrane components; putative Na+/H+ antiporter 1246285 12360985 HPGAM_06130 Helicobacter pylori Gambia94/24 putative Na+/H+ antiporter YP_005780890.1 1245134 R 907240 CDS YP_005780891.1 385219416 12360986 complement(1246311..1247690) 1 NC_017371.1 COG0534 Na+-driven multidrug efflux pump; hypothetical protein 1247690 12360986 HPGAM_06135 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780891.1 1246311 R 907240 CDS YP_005780892.1 385219417 12360987 1247664..1247801 1 NC_017371.1 hypothetical protein 1247801 12360987 HPGAM_06140 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780892.1 1247664 D 907240 CDS YP_005780893.1 385219418 12360988 complement(1247851..1249026) 1 NC_017371.1 COG2814 Arabinose efflux permease; putative arabinose transporter 1249026 12360988 HPGAM_06145 Helicobacter pylori Gambia94/24 putative arabinose transporter YP_005780893.1 1247851 R 907240 CDS YP_005780894.1 385219419 12360989 1249304..1250047 1 NC_017371.1 COG3338 Carbonic anhydrase; Alpha-carbonic anhydrase; putative signal peptide 1250047 12360989 HPGAM_06150 Helicobacter pylori Gambia94/24 Alpha-carbonic anhydrase; putative signal peptide YP_005780894.1 1249304 D 907240 CDS YP_005780895.1 385219420 12360990 complement(1250287..1251327) 1 NC_017371.1 hypothetical protein 1251327 12360990 HPGAM_06155 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780895.1 1250287 R 907240 CDS YP_005780896.1 385219421 12360991 complement(1251785..1252825) 1 NC_017371.1 COG0136 Aspartate-semialdehyde dehydrogenase; aspartate-semialdehyde dehydrogenase 1252825 12360991 HPGAM_06160 Helicobacter pylori Gambia94/24 aspartate-semialdehyde dehydrogenase YP_005780896.1 1251785 R 907240 CDS YP_005780897.1 385219422 12360992 complement(1252812..1254140) 1 NC_017371.1 COG0124 Histidyl-tRNA synthetase; histidyl-tRNA synthetase 1254140 hisS 12360992 hisS Helicobacter pylori Gambia94/24 histidyl-tRNA synthetase YP_005780897.1 1252812 R 907240 CDS YP_005780898.1 385219423 12360993 1254202..1255251 1 NC_017371.1 COG0859 ADP-heptose:LPS heptosyltransferase; ADP-heptose--LPS heptosyltransferase II 1255251 12360993 HPGAM_06170 Helicobacter pylori Gambia94/24 ADP-heptose--LPS heptosyltransferase II YP_005780898.1 1254202 D 907240 CDS YP_005780899.1 385219424 12360994 complement(1255385..1255819) 1 NC_017371.1 hypothetical protein 1255819 12360994 HPGAM_06175 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780899.1 1255385 R 907240 CDS YP_005780900.1 385219425 12360995 complement(1256372..1258450) 1 NC_017371.1 COG0480 Translation elongation factors (GTPases); elongation factor G 1258450 12360995 HPGAM_06180 Helicobacter pylori Gambia94/24 elongation factor G YP_005780900.1 1256372 R 907240 CDS YP_005780901.1 385219426 12360996 complement(1258462..1258929) 1 NC_017371.1 COG0049 Ribosomal protein S7; 30S ribosomal protein S7 1258929 12360996 HPGAM_06185 Helicobacter pylori Gambia94/24 30S ribosomal protein S7 YP_005780901.1 1258462 R 907240 CDS YP_005780902.1 385219427 12360997 complement(1258945..1259352) 1 NC_017371.1 COG0048 Ribosomal protein S12; 30S ribosomal protein S12 1259352 rpsL 12360997 rpsL Helicobacter pylori Gambia94/24 30S ribosomal protein S12 YP_005780902.1 1258945 R 907240 CDS YP_005780903.1 385219428 12360998 complement(1259441..1268113) 1 NC_017371.1 COG0085 DNA-directed RNA polymerase, beta subunit/140 kD subunit; bifunctional DNA-directed RNA polymerase subunit beta/beta' 1268113 12360998 HPGAM_06195 Helicobacter pylori Gambia94/24 bifunctional DNA-directed RNA polymerase subunit beta/beta' YP_005780903.1 1259441 R 907240 CDS YP_005780904.1 385219429 12360999 complement(1268334..1268711) 1 NC_017371.1 COG0222 Ribosomal protein L7/L12; 50S ribosomal protein L7/L12 1268711 rplL 12360999 rplL Helicobacter pylori Gambia94/24 50S ribosomal protein L7/L12 YP_005780904.1 1268334 R 907240 CDS YP_005780905.1 385219430 12361000 complement(1268754..1269248) 1 NC_017371.1 COG0244 Ribosomal protein L10; 50S ribosomal protein L10 1269248 rplJ 12361000 rplJ Helicobacter pylori Gambia94/24 50S ribosomal protein L10 YP_005780905.1 1268754 R 907240 CDS YP_005780906.1 385219431 12361001 complement(1269357..1270061) 1 NC_017371.1 COG0081 Ribosomal protein L1; 50S ribosomal protein L1 1270061 rplA 12361001 rplA Helicobacter pylori Gambia94/24 50S ribosomal protein L1 YP_005780906.1 1269357 R 907240 CDS YP_005780907.1 385219432 12361002 complement(1270113..1270538) 1 NC_017371.1 COG0080 Ribosomal protein L11; 50S ribosomal protein L11 1270538 rplK 12361002 rplK Helicobacter pylori Gambia94/24 50S ribosomal protein L11 YP_005780907.1 1270113 R 907240 CDS YP_005780908.1 385219433 12361003 complement(1270556..1271083) 1 NC_017371.1 COG0250 Transcription antiterminator; transcription antitermination protein NusG 1271083 nusG 12361003 nusG Helicobacter pylori Gambia94/24 transcription antitermination protein NusG YP_005780908.1 1270556 R 907240 CDS YP_005780909.1 385219434 12361004 complement(1271113..1271292) 1 NC_017371.1 preprotein translocase subunit SecE 1271292 secE 12361004 secE Helicobacter pylori Gambia94/24 preprotein translocase subunit SecE YP_005780909.1 1271113 R 907240 CDS YP_005780910.1 385219435 12361006 complement(1271547..1271705) 1 NC_017371.1 COG0267 Ribosomal protein L33; 50S ribosomal protein L33 1271705 rpmG 12361006 rpmG Helicobacter pylori Gambia94/24 50S ribosomal protein L33 YP_005780910.1 1271547 R 907240 CDS YP_005780911.1 385219436 12361007 complement(1271762..1272961) 1 NC_017371.1 COG0050 GTPases - translation elongation factors; elongation factor Tu 1272961 12361007 HPGAM_06235 Helicobacter pylori Gambia94/24 elongation factor Tu YP_005780911.1 1271762 R 907240 CDS YP_005780912.1 385219437 12361012 1273664..1275400 1 NC_017371.1 COG1132 ABC-type multidrug transport system, ATPase and permease components; ABC transporter ATP-binding protein 1275400 12361012 HPGAM_06240 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780912.1 1273664 D 907240 CDS YP_005780913.1 385219438 12361013 complement(1275411..1276079) 1 NC_017371.1 COG0546 Predicted phosphatases; hypothetical protein 1276079 12361013 HPGAM_06245 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780913.1 1275411 R 907240 CDS YP_005780914.1 385219439 12361014 complement(1276267..1277256) 1 NC_017371.1 COG3392 Adenine-specific DNA methylase; Site-specific DNA-methyltransferase 1277256 12361014 HPGAM_06250 Helicobacter pylori Gambia94/24 Site-specific DNA-methyltransferase YP_005780914.1 1276267 R 907240 CDS YP_005780915.1 385219440 12361015 complement(1277588..1277872) 1 NC_017371.1 hypothetical protein 1277872 12361015 HPGAM_06255 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780915.1 1277588 R 907240 CDS YP_005780916.1 385219441 12361016 complement(1278156..1278671) 1 NC_017371.1 COG1045 Serine acetyltransferase; serine acetyltransferase 1278671 12361016 HPGAM_06260 Helicobacter pylori Gambia94/24 serine acetyltransferase YP_005780916.1 1278156 R 907240 CDS YP_005780917.1 385219442 12361022 complement(1279248..1279565) 1 NC_017371.1 COG0636 F0F1-type ATP synthase, subunit c/Archaeal/vacuolar-type H+-ATPase, subunit K; F0F1 ATP synthase subunit C 1279565 12361022 HPGAM_06265 Helicobacter pylori Gambia94/24 F0F1 ATP synthase subunit C YP_005780917.1 1279248 R 907240 CDS YP_005780918.1 385219443 12361024 complement(1279698..1281764) 1 NC_017371.1 COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); polynucleotide phosphorylase/polyadenylase 1281764 12361024 HPGAM_06270 Helicobacter pylori Gambia94/24 polynucleotide phosphorylase/polyadenylase YP_005780918.1 1279698 R 907240 CDS YP_005780919.1 385219444 12361025 complement(1281767..1282471) 1 NC_017371.1 COG1926 Predicted phosphoribosyltransferases; hypothetical protein 1282471 12361025 HPGAM_06275 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780919.1 1281767 R 907240 CDS YP_005780920.1 385219445 12361026 complement(1282486..1284747) 1 NC_017371.1 COG1452 Organic solvent tolerance protein OstA; organic solvent tolerance protein 1284747 12361026 HPGAM_06280 Helicobacter pylori Gambia94/24 organic solvent tolerance protein YP_005780920.1 1282486 R 907240 CDS YP_005780921.1 385219446 12361027 complement(1284750..1285229) 1 NC_017371.1 hypothetical protein 1285229 12361027 HPGAM_06285 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780921.1 1284750 R 907240 CDS YP_005780922.1 385219447 12361028 complement(1285278..1286552) 1 NC_017371.1 COG0151 Phosphoribosylamine-glycine ligase; glycinamide ribonucleotide synthetase 1286552 12361028 HPGAM_06290 Helicobacter pylori Gambia94/24 glycinamide ribonucleotide synthetase YP_005780922.1 1285278 R 907240 CDS YP_005780923.1 385219448 12361029 complement(1286867..1287553) 1 NC_017371.1 COG1131 ABC-type multidrug transport system, ATPase component; ABC transporter ATP-binding protein 1287553 12361029 HPGAM_06295 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005780923.1 1286867 R 907240 CDS YP_005780924.1 385219449 12361031 complement(1287547..1288251) 1 NC_017371.1 COG0020 Undecaprenyl pyrophosphate synthase; undecaprenyl pyrophosphate synthase 1288251 12361031 HPGAM_06300 Helicobacter pylori Gambia94/24 undecaprenyl pyrophosphate synthase YP_005780924.1 1287547 R 907240 CDS YP_005780925.1 385219450 12361033 complement(1288291..1291131) 1 NC_017371.1 COG0277 FAD/FMN-containing dehydrogenases; D-lactate dehydrogenase 1291131 12361033 HPGAM_06305 Helicobacter pylori Gambia94/24 D-lactate dehydrogenase YP_005780925.1 1288291 R 907240 CDS YP_005780926.1 385219451 12361034 1291203..1291541 1 NC_017371.1 COG0607 Rhodanese-related sulfurtransferase; hypothetical protein 1291541 12361034 HPGAM_06310 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780926.1 1291203 D 907240 CDS YP_005780927.1 385219452 12361035 1291544..1292224 1 NC_017371.1 COG1587 Uroporphyrinogen-III synthase; uroporphyrinogen-III synthase 1292224 hemD 12361035 hemD Helicobacter pylori Gambia94/24 uroporphyrinogen-III synthase YP_005780927.1 1291544 D 907240 CDS YP_005780928.1 385219453 12361036 1292271..1292663 1 NC_017371.1 COG0239 Integral membrane protein possibly involved in chromosome condensation; camphor resistance protein CrcB 1292663 12361036 HPGAM_06320 Helicobacter pylori Gambia94/24 camphor resistance protein CrcB YP_005780928.1 1292271 D 907240 CDS YP_005780929.1 385219454 12361037 complement(1292714..1293751) 1 NC_017371.1 COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductases; coproporphyrinogen III oxidase 1293751 12361037 HPGAM_06325 Helicobacter pylori Gambia94/24 coproporphyrinogen III oxidase YP_005780929.1 1292714 R 907240 CDS YP_005780930.1 385219455 12361038 1293847..1294137 1 NC_017371.1 COG2863 Cytochrome c553; cytochrome c-553 1294137 12361038 HPGAM_06330 Helicobacter pylori Gambia94/24 cytochrome c-553 YP_005780930.1 1293847 D 907240 CDS YP_005780931.1 385219456 12361039 complement(1294130..1294222) 1 NC_017371.1 hypothetical protein 1294222 12361039 HPGAM_06335 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780931.1 1294130 R 907240 CDS YP_005780932.1 385219457 12361040 1294298..1294771 1 NC_017371.1 COG0494 NTP pyrophosphohydrolases including oxidative damage repair enzymes; RNA pyrophosphohydrolase 1294771 12361040 HPGAM_06340 Helicobacter pylori Gambia94/24 RNA pyrophosphohydrolase YP_005780932.1 1294298 D 907240 CDS YP_005780933.1 385219458 12361041 1294765..1295982 1 NC_017371.1 COG0527 Aspartokinases; aspartate kinase 1295982 12361041 HPGAM_06345 Helicobacter pylori Gambia94/24 aspartate kinase YP_005780933.1 1294765 D 907240 CDS YP_005780934.1 385219459 12361042 1295979..1296521 1 NC_017371.1 hypothetical protein 1296521 12361042 HPGAM_06350 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780934.1 1295979 D 907240 CDS YP_005780935.1 385219460 12361043 1296518..1297174 1 NC_017371.1 COG0470 ATPase involved in DNA replication; DNA polymerase III subunit delta' 1297174 12361043 HPGAM_06355 Helicobacter pylori Gambia94/24 DNA polymerase III subunit delta' YP_005780935.1 1296518 D 907240 CDS YP_005780936.1 385219461 12361044 1297171..1298313 1 NC_017371.1 COG0294 Dihydropteroate synthase and related enzymes; dihydropteroate synthase 1298313 12361044 HPGAM_06360 Helicobacter pylori Gambia94/24 dihydropteroate synthase YP_005780936.1 1297171 D 907240 CDS YP_005780937.1 385219462 12361045 complement(1298408..1298869) 1 NC_017371.1 hypothetical protein 1298869 12361045 HPGAM_06365 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780937.1 1298408 R 907240 CDS YP_005780938.1 385219463 12361046 1298870..1299166 1 NC_017371.1 hypothetical protein 1299166 12361046 HPGAM_06370 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780938.1 1298870 D 907240 CDS YP_005780939.1 385219464 12361047 1299220..1300128 1 NC_017371.1 COG0697 Permeases of the drug/metabolite transporter (DMT) superfamily; putative membrane transport protein 1300128 12361047 HPGAM_06375 Helicobacter pylori Gambia94/24 putative membrane transport protein YP_005780939.1 1299220 D 907240 CDS YP_005780940.1 385219465 12361048 1300119..1301366 1 NC_017371.1 hypothetical protein 1301366 12361048 HPGAM_06380 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780940.1 1300119 D 907240 CDS YP_005780941.1 385219466 12361049 1301445..1301996 1 NC_017371.1 COG2952 Uncharacterized protein conserved in bacteria; hypothetical protein 1301996 12361049 HPGAM_06385 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780941.1 1301445 D 907240 CDS YP_005780942.1 385219467 12361050 1301996..1303123 1 NC_017371.1 COG0505 Carbamoylphosphate synthase small subunit; carbamoyl phosphate synthase small subunit 1303123 12361050 HPGAM_06390 Helicobacter pylori Gambia94/24 carbamoyl phosphate synthase small subunit YP_005780942.1 1301996 D 907240 CDS YP_005780943.1 385219468 12361051 1303289..1304293 1 NC_017371.1 COG0388 Predicted amidohydrolase; formamidase 1304293 amiF 12361051 amiF Helicobacter pylori Gambia94/24 formamidase YP_005780943.1 1303289 D 907240 CDS YP_005780944.1 385219469 12361052 complement(1304372..1304629) 1 NC_017371.1 hypothetical protein 1304629 12361052 HPGAM_06400 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780944.1 1304372 R 907240 CDS YP_005780945.1 385219470 12361053 complement(1304777..1305253) 1 NC_017371.1 hypothetical protein 1305253 12361053 HPGAM_06405 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780945.1 1304777 R 907240 CDS YP_005780946.1 385219471 12361054 complement(1305369..1305941) 1 NC_017371.1 COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Maf-like protein 1305941 12361054 HPGAM_06410 Helicobacter pylori Gambia94/24 Maf-like protein YP_005780946.1 1305369 R 907240 CDS YP_005780947.1 385219472 12361055 complement(1305943..1308486) 1 NC_017371.1 COG0013 Alanyl-tRNA synthetase; alanyl-tRNA synthetase 1308486 alaS 12361055 alaS Helicobacter pylori Gambia94/24 alanyl-tRNA synthetase YP_005780947.1 1305943 R 907240 CDS YP_005780948.1 385219473 12361056 1308605..1308835 1 NC_017371.1 COG2841 Uncharacterized protein conserved in bacteria; hypothetical protein 1308835 12361056 HPGAM_06420 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780948.1 1308605 D 907240 CDS YP_005780949.1 385219474 12361057 complement(1309577..1309792) 1 NC_017371.1 hypothetical protein 1309792 12361057 HPGAM_06425 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780949.1 1309577 R 907240 CDS YP_005780950.1 385219475 12361058 complement(1310164..1312215) 1 NC_017371.1 outer membrane protein - adhesin 1312215 12361058 HPGAM_06430 Helicobacter pylori Gambia94/24 outer membrane protein - adhesin YP_005780950.1 1310164 R 907240 CDS YP_005780951.1 385219476 12361059 1312343..1312441 1 NC_017371.1 hypothetical protein 1312441 12361059 HPGAM_06435 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780951.1 1312343 D 907240 CDS YP_005780952.1 385219477 12361060 complement(1312571..1312828) 1 NC_017371.1 COG0238 Ribosomal protein S18; 30S ribosomal protein S18 1312828 rpsR 12361060 rpsR Helicobacter pylori Gambia94/24 30S ribosomal protein S18 YP_005780952.1 1312571 R 907240 CDS YP_005780953.1 385219478 12361061 complement(1312851..1313396) 1 NC_017371.1 COG0629 Single-stranded DNA-binding protein; single-stranded DNA-binding protein 1313396 12361061 HPGAM_06445 Helicobacter pylori Gambia94/24 single-stranded DNA-binding protein YP_005780953.1 1312851 R 907240 CDS YP_005780954.1 385219479 12361062 complement(1313406..1313834) 1 NC_017371.1 COG0360 Ribosomal protein S6; 30S ribosomal protein S6 1313834 rpsF 12361062 rpsF Helicobacter pylori Gambia94/24 30S ribosomal protein S6 YP_005780954.1 1313406 R 907240 CDS YP_005780955.1 385219480 12361063 complement(1313987..1315009) 1 NC_017371.1 DNA polymerase III subunit delta 1315009 12361063 HPGAM_06455 Helicobacter pylori Gambia94/24 DNA polymerase III subunit delta YP_005780955.1 1313987 R 907240 CDS YP_005780956.1 385219481 12361064 complement(1314999..1316933) 1 NC_017371.1 COG0557 Exoribonuclease R; ribonuclease R 1316933 12361064 HPGAM_06460 Helicobacter pylori Gambia94/24 ribonuclease R YP_005780956.1 1314999 R 907240 CDS YP_005780957.1 385219482 12361065 complement(1316933..1317724) 1 NC_017371.1 COG0169 Shikimate 5-dehydrogenase; shikimate 5-dehydrogenase 1317724 aroE 12361065 aroE Helicobacter pylori Gambia94/24 shikimate 5-dehydrogenase YP_005780957.1 1316933 R 907240 CDS YP_005780958.1 385219483 12361066 complement(1317732..1318310) 1 NC_017371.1 hypothetical protein 1318310 12361066 HPGAM_06470 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780958.1 1317732 R 907240 CDS YP_005780959.1 385219484 12361067 complement(1318319..1319365) 1 NC_017371.1 COG4174 ABC-type uncharacterized transport system, permease component; oligopeptide ABC transporter permease 1319365 12361067 HPGAM_06475 Helicobacter pylori Gambia94/24 oligopeptide ABC transporter permease YP_005780959.1 1318319 R 907240 CDS YP_005780960.1 385219485 12361068 complement(1319362..1321149) 1 NC_017371.1 COG4166 ABC-type oligopeptide transport system, periplasmic component; hypothetical protein 1321149 12361068 HPGAM_06480 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780960.1 1319362 R 907240 CDS YP_005780961.1 385219486 12361069 complement(1321150..1322130) 1 NC_017371.1 COG0180 Tryptophanyl-tRNA synthetase; tryptophanyl-tRNA synthetase 1322130 12361069 HPGAM_06485 Helicobacter pylori Gambia94/24 tryptophanyl-tRNA synthetase YP_005780961.1 1321150 R 907240 CDS YP_005780962.1 385219487 12361070 complement(1322201..1322938) 1 NC_017371.1 COG0500 SAM-dependent methyltransferases; hypothetical protein 1322938 12361070 HPGAM_06490 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780962.1 1322201 R 907240 CDS YP_005780963.1 385219488 12361071 1323061..1323663 1 NC_017371.1 COG1314 Preprotein translocase subunit SecG; preprotein translocase subunit SecG 1323663 secG 12361071 secG Helicobacter pylori Gambia94/24 preprotein translocase subunit SecG YP_005780963.1 1323061 D 907240 CDS YP_005780964.1 385219489 12361072 1323663..1324220 1 NC_017371.1 COG0233 Ribosome recycling factor; ribosome recycling factor 1324220 frr 12361072 frr Helicobacter pylori Gambia94/24 ribosome recycling factor YP_005780964.1 1323663 D 907240 CDS YP_005780965.1 385219490 12361073 1324224..1324829 1 NC_017371.1 COG0461 Orotate phosphoribosyltransferase; orotate phosphoribosyltransferase 1324829 pyrE 12361073 pyrE Helicobacter pylori Gambia94/24 orotate phosphoribosyltransferase YP_005780965.1 1324224 D 907240 CDS YP_005780966.1 385219491 12361074 1324819..1325283 1 NC_017371.1 COG1714 Predicted membrane protein/domain; hypothetical protein 1325283 12361074 HPGAM_06510 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780966.1 1324819 D 907240 CDS YP_005780967.1 385219492 12361075 1325280..1325984 1 NC_017371.1 COG0846 NAD-dependent protein deacetylases, SIR2 family; NAD-dependent deacetylase 1325984 12361075 HPGAM_06515 Helicobacter pylori Gambia94/24 NAD-dependent deacetylase YP_005780967.1 1325280 D 907240 CDS YP_005780968.1 385219493 12361076 1326077..1326478 1 NC_017371.1 COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); NADH dehydrogenase subunit A 1326478 12361076 HPGAM_06520 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit A YP_005780968.1 1326077 D 907240 CDS YP_005780969.1 385219494 12361077 1326478..1326957 1 NC_017371.1 COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductases; NADH dehydrogenase subunit B 1326957 12361077 HPGAM_06525 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit B YP_005780969.1 1326478 D 907240 CDS YP_005780970.1 385219495 12361078 1326957..1327106 1 NC_017371.1 NADH dehydrogenase subunit C 1327106 12361078 HPGAM_06530 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit C YP_005780970.1 1326957 D 907240 CDS YP_005780971.1 385219496 12361079 1327111..1327908 1 NC_017371.1 COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; NADH dehydrogenase subunit C 1327908 12361079 HPGAM_06535 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit C YP_005780971.1 1327111 D 907240 CDS YP_005780972.1 385219497 12361080 1327910..1329139 1 NC_017371.1 COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; NADH dehydrogenase subunit D 1329139 12361080 HPGAM_06540 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit D YP_005780972.1 1327910 D 907240 CDS YP_005780973.1 385219498 12361081 1329136..1329366 1 NC_017371.1 NADH dehydrogenase I subunit E 1329366 12361081 HPGAM_06545 Helicobacter pylori Gambia94/24 NADH dehydrogenase I subunit E YP_005780973.1 1329136 D 907240 CDS YP_005780974.1 385219499 12361082 1329369..1330349 1 NC_017371.1 NADH-ubiquinone oxidoreductase subunit F 1330349 12361082 HPGAM_06550 Helicobacter pylori Gambia94/24 NADH-ubiquinone oxidoreductase subunit F YP_005780974.1 1329369 D 907240 CDS YP_005780975.1 385219500 12361083 1330346..1332880 1 NC_017371.1 COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); NADH dehydrogenase subunit G 1332880 12361083 HPGAM_06555 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit G YP_005780975.1 1330346 D 907240 CDS YP_005780976.1 385219501 12361084 1332877..1333866 1 NC_017371.1 COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); NADH:ubiquinone oxidoreductase subunit H 1333866 12361084 HPGAM_06560 Helicobacter pylori Gambia94/24 NADH:ubiquinone oxidoreductase subunit H YP_005780976.1 1332877 D 907240 CDS YP_005780977.1 385219502 12361085 1333877..1334536 1 NC_017371.1 COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); NADH dehydrogenase subunit I 1334536 12361085 HPGAM_06565 Helicobacter pylori Gambia94/24 NADH dehydrogenase subunit I YP_005780977.1 1333877 D 907240 CDS YP_005780978.1 385219503 12361086 1334529..1335077 1 NC_017371.1 COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); NADH:ubiquinone oxidoreductase subunit J 1335077 12361086 HPGAM_06570 Helicobacter pylori Gambia94/24 NADH:ubiquinone oxidoreductase subunit J YP_005780978.1 1334529 D 907240 CDS YP_005780979.1 385219504 12361087 1335074..1335376 1 NC_017371.1 COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); NADH:ubiquinone oxidoreductase subunit K 1335376 12361087 HPGAM_06575 Helicobacter pylori Gambia94/24 NADH:ubiquinone oxidoreductase subunit K YP_005780979.1 1335074 D 907240 CDS YP_005780980.1 385219505 12361088 1335379..1337217 1 NC_017371.1 COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit; NADH:ubiquinone oxidoreductase subunit L 1337217 12361088 HPGAM_06580 Helicobacter pylori Gambia94/24 NADH:ubiquinone oxidoreductase subunit L YP_005780980.1 1335379 D 907240 CDS YP_005780981.1 385219506 12361089 1337221..1338759 1 NC_017371.1 COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); NADH:ubiquinone oxidoreductase subunit M 1338759 12361089 HPGAM_06585 Helicobacter pylori Gambia94/24 NADH:ubiquinone oxidoreductase subunit M YP_005780981.1 1337221 D 907240 CDS YP_005780982.1 385219507 12361090 1338746..1340224 1 NC_017371.1 COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); NADH:ubiquinone oxidoreductase subunit N 1340224 12361090 HPGAM_06590 Helicobacter pylori Gambia94/24 NADH:ubiquinone oxidoreductase subunit N YP_005780982.1 1338746 D 907240 CDS YP_005780983.1 385219508 12361091 1340214..1342625 1 NC_017371.1 COG1729 Uncharacterized protein conserved in bacteria; flagellar functional protein 1342625 12361091 HPGAM_06595 Helicobacter pylori Gambia94/24 flagellar functional protein YP_005780983.1 1340214 D 907240 CDS YP_005780984.1 385219509 12361092 1342626..1344005 1 NC_017371.1 COG1109 Phosphomannomutase; phosphomannomutase 1344005 12361092 HPGAM_06600 Helicobacter pylori Gambia94/24 phosphomannomutase YP_005780984.1 1342626 D 907240 CDS YP_005780985.1 385219510 12361093 1344184..1344555 1 NC_017371.1 hypothetical protein 1344555 12361093 HPGAM_06605 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780985.1 1344184 D 907240 CDS YP_005780986.1 385219511 12361094 complement(1344734..1345522) 1 NC_017371.1 COG0159 Tryptophan synthase alpha chain; tryptophan synthase subunit alpha 1345522 trpA 12361094 trpA Helicobacter pylori Gambia94/24 tryptophan synthase subunit alpha YP_005780986.1 1344734 R 907240 CDS YP_005780987.1 385219512 12361095 complement(1345519..1346700) 1 NC_017371.1 COG0133 Tryptophan synthase beta chain; tryptophan synthase subunit beta 1346700 12361095 HPGAM_06615 Helicobacter pylori Gambia94/24 tryptophan synthase subunit beta YP_005780987.1 1345519 R 907240 CDS YP_005780988.1 385219513 12361096 complement(1346702..1348060) 1 NC_017371.1 COG0134 Indole-3-glycerol phosphate synthase; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1348060 12361096 HPGAM_06620 Helicobacter pylori Gambia94/24 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_005780988.1 1346702 R 907240 CDS YP_005780989.1 385219514 12361097 complement(1348053..1349060) 1 NC_017371.1 COG0547 Anthranilate phosphoribosyltransferase; anthranilate phosphoribosyltransferase 1349060 trpD 12361097 trpD Helicobacter pylori Gambia94/24 anthranilate phosphoribosyltransferase YP_005780989.1 1348053 R 907240 CDS YP_005780990.1 385219515 12361098 complement(1349057..1349641) 1 NC_017371.1 COG0512 Anthranilate/para-aminobenzoate synthases component II; anthranilate synthase component II 1349641 12361098 HPGAM_06630 Helicobacter pylori Gambia94/24 anthranilate synthase component II YP_005780990.1 1349057 R 907240 CDS YP_005780991.1 385219516 12361099 complement(1349638..1351140) 1 NC_017371.1 COG0147 Anthranilate/para-aminobenzoate synthases component I; anthranilate synthase component I 1351140 12361099 HPGAM_06635 Helicobacter pylori Gambia94/24 anthranilate synthase component I YP_005780991.1 1349638 R 907240 CDS YP_005780992.1 385219517 12361100 complement(1351308..1352366) 1 NC_017371.1 COG0859 ADP-heptose:LPS heptosyltransferase; hypothetical protein 1352366 12361100 HPGAM_06640 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780992.1 1351308 R 907240 CDS YP_005780993.1 385219518 12361101 complement(1352434..1353126) 1 NC_017371.1 COG2503 Predicted secreted acid phosphatase; hypothetical protein 1353126 12361101 HPGAM_06645 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780993.1 1352434 R 907240 CDS YP_005780994.1 385219519 12361102 1353295..1353843 1 NC_017371.1 COG2353 Uncharacterized conserved protein; hypothetical protein 1353843 12361102 HPGAM_06650 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780994.1 1353295 D 907240 CDS YP_005780995.1 385219520 12361103 complement(1353908..1354561) 1 NC_017371.1 COG0819 Putative transcription activator; transcriptional regulator (tenA) 1354561 12361103 HPGAM_06655 Helicobacter pylori Gambia94/24 transcriptional regulator (tenA) YP_005780995.1 1353908 R 907240 CDS YP_005780996.1 385219521 12361104 1355283..1355648 1 NC_017371.1 hypothetical protein 1355648 12361104 HPGAM_06660 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780996.1 1355283 D 907240 CDS YP_005780997.1 385219522 12361105 1355688..1356164 1 NC_017371.1 hypothetical protein 1356164 12361105 HPGAM_06665 Helicobacter pylori Gambia94/24 hypothetical protein YP_005780997.1 1355688 D 907240 CDS YP_005780998.1 385219523 12361106 1356341..1357003 1 NC_017371.1 COG3201 Nicotinamide mononucleotide transporter; nicotinamide mononucleotide transporter 1357003 12361106 HPGAM_06670 Helicobacter pylori Gambia94/24 nicotinamide mononucleotide transporter YP_005780998.1 1356341 D 907240 CDS YP_005780999.1 385219524 12361107 1356991..1357605 1 NC_017371.1 COG1564 Thiamine pyrophosphokinase; thiamine pyrophosphokinase 1357605 12361107 HPGAM_06675 Helicobacter pylori Gambia94/24 thiamine pyrophosphokinase YP_005780999.1 1356991 D 907240 CDS YP_005781000.1 385219525 12361108 complement(1358401..1358751) 1 NC_017371.1 COG0203 Ribosomal protein L17; 50S ribosomal protein L17 1358751 rplQ 12361108 rplQ Helicobacter pylori Gambia94/24 50S ribosomal protein L17 YP_005781000.1 1358401 R 907240 CDS YP_005781001.1 385219526 12361109 complement(1358751..1359785) 1 NC_017371.1 COG0202 DNA-directed RNA polymerase, alpha subunit/40 kD subunit; DNA-directed RNA polymerase subunit alpha 1359785 12361109 HPGAM_06685 Helicobacter pylori Gambia94/24 DNA-directed RNA polymerase subunit alpha YP_005781001.1 1358751 R 907240 CDS YP_005781002.1 385219527 12361110 complement(1359797..1360423) 1 NC_017371.1 COG0522 Ribosomal protein S4 and related proteins; 30S ribosomal protein S4 1360423 rpsD 12361110 rpsD Helicobacter pylori Gambia94/24 30S ribosomal protein S4 YP_005781002.1 1359797 R 907240 CDS YP_005781003.1 385219528 12361111 complement(1360433..1360828) 1 NC_017371.1 COG0100 Ribosomal protein S11; 30S ribosomal protein S11 1360828 12361111 HPGAM_06695 Helicobacter pylori Gambia94/24 30S ribosomal protein S11 YP_005781003.1 1360433 R 907240 CDS YP_005781004.1 385219529 12361112 complement(1360851..1361213) 1 NC_017371.1 COG0099 Ribosomal protein S13; 30S ribosomal protein S13 1361213 rpsM 12361112 rpsM Helicobacter pylori Gambia94/24 30S ribosomal protein S13 YP_005781004.1 1360851 R 907240 CDS YP_005781005.1 385219530 12361113 complement(1361217..1361330) 1 NC_017371.1 COG0257 Ribosomal protein L36; hypothetical protein 1361330 12361113 HPGAM_06705 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781005.1 1361217 R 907240 CDS YP_005781006.1 385219531 12361114 complement(1361408..1361626) 1 NC_017371.1 COG0361 Translation initiation factor 1 (IF-1); translation initiation factor IF-1 1361626 infA 12361114 infA Helicobacter pylori Gambia94/24 translation initiation factor IF-1 YP_005781006.1 1361408 R 907240 CDS YP_005781007.1 385219532 12361115 complement(1361626..1362387) 1 NC_017371.1 COG0024 Methionine aminopeptidase; methionine aminopeptidase 1362387 12361115 HPGAM_06715 Helicobacter pylori Gambia94/24 methionine aminopeptidase YP_005781007.1 1361626 R 907240 CDS YP_005781008.1 385219533 12361116 complement(1362387..1363649) 1 NC_017371.1 COG0201 Preprotein translocase subunit SecY; preprotein translocase subunit SecY 1363649 secY 12361116 secY Helicobacter pylori Gambia94/24 preprotein translocase subunit SecY YP_005781008.1 1362387 R 907240 CDS YP_005781009.1 385219534 12361117 complement(1363689..1364090) 1 NC_017371.1 COG0200 Ribosomal protein L15; 50S ribosomal protein L15 1364090 rplO 12361117 rplO Helicobacter pylori Gambia94/24 50S ribosomal protein L15 YP_005781009.1 1363689 R 907240 CDS YP_005781010.1 385219535 12361118 complement(1364108..1364569) 1 NC_017371.1 COG0098 Ribosomal protein S5; 30S ribosomal protein S5 1364569 rpsE 12361118 rpsE Helicobacter pylori Gambia94/24 30S ribosomal protein S5 YP_005781010.1 1364108 R 907240 CDS YP_005781011.1 385219536 12361119 complement(1364566..1364922) 1 NC_017371.1 COG0256 Ribosomal protein L18; 50S ribosomal protein L18 1364922 rplR 12361119 rplR Helicobacter pylori Gambia94/24 50S ribosomal protein L18 YP_005781011.1 1364566 R 907240 CDS YP_005781012.1 385219537 12361120 complement(1364936..1365472) 1 NC_017371.1 COG0097 Ribosomal protein L6P/L9E; 50S ribosomal protein L6 1365472 rplF 12361120 rplF Helicobacter pylori Gambia94/24 50S ribosomal protein L6 YP_005781012.1 1364936 R 907240 CDS YP_005781013.1 385219538 12361121 complement(1365483..1365878) 1 NC_017371.1 COG0096 Ribosomal protein S8; 30S ribosomal protein S8 1365878 rpsH 12361121 rpsH Helicobacter pylori Gambia94/24 30S ribosomal protein S8 YP_005781013.1 1365483 R 907240 CDS YP_005781014.1 385219539 12361122 complement(1365888..1366073) 1 NC_017371.1 COG0199 Ribosomal protein S14; 30S ribosomal protein S14 1366073 rpsN 12361122 rpsN Helicobacter pylori Gambia94/24 30S ribosomal protein S14 YP_005781014.1 1365888 R 907240 CDS YP_005781015.1 385219540 12361123 complement(1366083..1366628) 1 NC_017371.1 COG0094 Ribosomal protein L5; 50S ribosomal protein L5 1366628 rplE 12361123 rplE Helicobacter pylori Gambia94/24 50S ribosomal protein L5 YP_005781015.1 1366083 R 907240 CDS YP_005781016.1 385219541 12361124 complement(1366642..1366863) 1 NC_017371.1 COG0198 Ribosomal protein L24; 50S ribosomal protein L24 1366863 rplX 12361124 rplX Helicobacter pylori Gambia94/24 50S ribosomal protein L24 YP_005781016.1 1366642 R 907240 CDS YP_005781017.1 385219542 12361125 complement(1366863..1367231) 1 NC_017371.1 COG0093 Ribosomal protein L14; 50S ribosomal protein L14 1367231 rplN 12361125 rplN Helicobacter pylori Gambia94/24 50S ribosomal protein L14 YP_005781017.1 1366863 R 907240 CDS YP_005781018.1 385219543 12361126 complement(1367234..1367494) 1 NC_017371.1 COG0186 Ribosomal protein S17; 30S ribosomal protein S17 1367494 rpsQ 12361126 rpsQ Helicobacter pylori Gambia94/24 30S ribosomal protein S17 YP_005781018.1 1367234 R 907240 CDS YP_005781019.1 385219544 12361127 complement(1367508..1367708) 1 NC_017371.1 COG0255 Ribosomal protein L29; 50S ribosomal protein L29 1367708 12361127 HPGAM_06775 Helicobacter pylori Gambia94/24 50S ribosomal protein L29 YP_005781019.1 1367508 R 907240 CDS YP_005781020.1 385219545 12361128 complement(1367695..1368120) 1 NC_017371.1 COG0197 Ribosomal protein L16/L10E; 50S ribosomal protein L16 1368120 rplP 12361128 rplP Helicobacter pylori Gambia94/24 50S ribosomal protein L16 YP_005781020.1 1367695 R 907240 CDS YP_005781021.1 385219546 12361129 complement(1368123..1368827) 1 NC_017371.1 COG0092 Ribosomal protein S3; 30S ribosomal protein S3 1368827 rpsC 12361129 rpsC Helicobacter pylori Gambia94/24 30S ribosomal protein S3 YP_005781021.1 1368123 R 907240 CDS YP_005781022.1 385219547 12361130 complement(1368831..1369199) 1 NC_017371.1 COG0091 Ribosomal protein L22; 50S ribosomal protein L22 1369199 rplV 12361130 rplV Helicobacter pylori Gambia94/24 50S ribosomal protein L22 YP_005781022.1 1368831 R 907240 CDS YP_005781023.1 385219548 12361131 complement(1369209..1369490) 1 NC_017371.1 COG0185 Ribosomal protein S19; 30S ribosomal protein S19 1369490 rpsS 12361131 rpsS Helicobacter pylori Gambia94/24 30S ribosomal protein S19 YP_005781023.1 1369209 R 907240 CDS YP_005781024.1 385219549 12361132 complement(1369502..1370332) 1 NC_017371.1 COG0090 Ribosomal protein L2; 50S ribosomal protein L2 1370332 rplB 12361132 rplB Helicobacter pylori Gambia94/24 50S ribosomal protein L2 YP_005781024.1 1369502 R 907240 CDS YP_005781025.1 385219550 12361133 complement(1370348..1370629) 1 NC_017371.1 COG0089 Ribosomal protein L23; 50S ribosomal protein L23 1370629 rplW 12361133 rplW Helicobacter pylori Gambia94/24 50S ribosomal protein L23 YP_005781025.1 1370348 R 907240 CDS YP_005781026.1 385219551 12361134 complement(1370633..1371280) 1 NC_017371.1 COG0088 Ribosomal protein L4; 50S ribosomal protein L4 1371280 rplD 12361134 rplD Helicobacter pylori Gambia94/24 50S ribosomal protein L4 YP_005781026.1 1370633 R 907240 CDS YP_005781027.1 385219552 12361135 complement(1371315..1371890) 1 NC_017371.1 COG0087 Ribosomal protein L3; 50S ribosomal protein L3 1371890 rplC 12361135 rplC Helicobacter pylori Gambia94/24 50S ribosomal protein L3 YP_005781027.1 1371315 R 907240 CDS YP_005781028.1 385219553 12361136 complement(1371927..1372241) 1 NC_017371.1 COG0051 Ribosomal protein S10; 30S ribosomal protein S10 1372241 rpsJ 12361136 rpsJ Helicobacter pylori Gambia94/24 30S ribosomal protein S10 YP_005781028.1 1371927 R 907240 CDS YP_005781029.1 385219554 12361137 1372452..1373540 1 NC_017371.1 COG1373 Predicted ATPase (AAA+ superfamily); ATP-binding protein 1373540 12361137 HPGAM_06825 Helicobacter pylori Gambia94/24 ATP-binding protein YP_005781029.1 1372452 D 907240 CDS YP_005781030.1 385219555 12361138 1373764..1374345 1 NC_017371.1 hypothetical protein 1374345 12361138 HPGAM_06830 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781030.1 1373764 D 907240 CDS YP_005781031.1 385219556 12361139 complement(1374331..1374936) 1 NC_017371.1 COG0164 Ribonuclease HII; ribonuclease HII 1374936 rnhB 12361139 rnhB Helicobacter pylori Gambia94/24 ribonuclease HII YP_005781031.1 1374331 R 907240 CDS YP_005781032.1 385219557 12361140 complement(1374966..1375217) 1 NC_017371.1 hypothetical protein 1375217 12361140 HPGAM_06840 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781032.1 1374966 R 907240 CDS YP_005781033.1 385219558 12361141 complement(1375239..1376630) 1 NC_017371.1 COG0114 Fumarase; fumarate hydratase 1376630 fumC 12361141 fumC Helicobacter pylori Gambia94/24 fumarate hydratase YP_005781033.1 1375239 R 907240 CDS YP_005781034.1 385219559 12361142 1376804..1377181 1 NC_017371.1 hypothetical protein 1377181 12361142 HPGAM_06850 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781034.1 1376804 D 907240 CDS YP_005781035.1 385219560 12361143 1377186..1378424 1 NC_017371.1 hypothetical protein 1378424 12361143 HPGAM_06855 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781035.1 1377186 D 907240 CDS YP_005781036.1 385219561 12361144 1378421..1379437 1 NC_017371.1 COG0845 Membrane-fusion protein; putative cobalt-zinc-cadmium resistance protein CzcB; putative signal peptide 1379437 12361144 HPGAM_06860 Helicobacter pylori Gambia94/24 putative cobalt-zinc-cadmium resistance protein CzcB; putative signal peptide YP_005781036.1 1378421 D 907240 CDS YP_005781037.1 385219562 12361145 1379438..1382545 1 NC_017371.1 COG3696 Putative silver efflux pump; putative heavy metal efflux pump CzcA 1382545 12361145 HPGAM_06865 Helicobacter pylori Gambia94/24 putative heavy metal efflux pump CzcA YP_005781037.1 1379438 D 907240 CDS YP_005781038.1 385219563 12361146 complement(1382526..1382882) 1 NC_017371.1 COG1687 Predicted branched-chain amino acid permeases (azaleucine resistance); hypothetical protein 1382882 12361146 HPGAM_06870 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781038.1 1382526 R 907240 CDS YP_005781039.1 385219564 12361147 complement(1382876..1383562) 1 NC_017371.1 COG1296 Predicted branched-chain amino acid permease (azaleucine resistance); hypothetical protein 1383562 12361147 HPGAM_06875 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781039.1 1382876 R 907240 CDS YP_005781040.1 385219565 12361148 complement(1383573..1384682) 1 NC_017371.1 COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; chaperone protein DnaJ 1384682 12361148 HPGAM_06880 Helicobacter pylori Gambia94/24 chaperone protein DnaJ YP_005781040.1 1383573 R 907240 CDS YP_005781041.1 385219566 12361149 1384808..1385944 1 NC_017371.1 hypothetical protein 1385944 12361149 HPGAM_06885 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781041.1 1384808 D 907240 CDS YP_005781042.1 385219567 12361150 complement(1386255..1387283) 1 NC_017371.1 COG0482 Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain; tRNA-specific 2-thiouridylase MnmA 1387283 mnmA 12361150 mnmA Helicobacter pylori Gambia94/24 tRNA-specific 2-thiouridylase MnmA YP_005781042.1 1386255 R 907240 CDS YP_005781043.1 385219568 12361151 1387425..1388186 1 NC_017371.1 COG2214 DnaJ-class molecular chaperone; hypothetical protein 1388186 12361151 HPGAM_06895 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781043.1 1387425 D 907240 CDS YP_005781044.1 385219569 12361152 complement(1388183..1388698) 1 NC_017371.1 COG1057 Nicotinic acid mononucleotide adenylyltransferase; nicotinate-nucleotide adenylyltransferase 1388698 12361152 HPGAM_06900 Helicobacter pylori Gambia94/24 nicotinate-nucleotide adenylyltransferase YP_005781044.1 1388183 R 907240 CDS YP_005781045.1 385219570 12361153 complement(1388691..1389137) 1 NC_017371.1 COG0864 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain; nickel responsive regulator 1389137 12361153 HPGAM_06905 Helicobacter pylori Gambia94/24 nickel responsive regulator YP_005781045.1 1388691 R 907240 CDS YP_005781046.1 385219571 12361154 1389448..1389885 1 NC_017371.1 COG0811 Biopolymer transport proteins; biopolymer transport protein 1389885 12361154 HPGAM_06910 Helicobacter pylori Gambia94/24 biopolymer transport protein YP_005781046.1 1389448 D 907240 CDS YP_005781047.1 385219572 12361155 1389882..1390271 1 NC_017371.1 COG0848 Biopolymer transport protein; biopolymer transport protein ExbD 1390271 12361155 HPGAM_06915 Helicobacter pylori Gambia94/24 biopolymer transport protein ExbD YP_005781047.1 1389882 D 907240 CDS YP_005781048.1 385219573 12361156 1390237..1391091 1 NC_017371.1 COG0810 Periplasmic protein TonB, links inner and outer membranes; periplasmic protein TonB 1391091 12361156 HPGAM_06920 Helicobacter pylori Gambia94/24 periplasmic protein TonB YP_005781048.1 1390237 D 907240 CDS YP_005781049.1 385219574 12361157 complement(1391115..1391225) 1 NC_017371.1 hypothetical protein 1391225 12361157 HPGAM_06925 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781049.1 1391115 R 907240 CDS YP_005781050.1 385219575 12361158 1391280..1393367 1 NC_017371.1 Outer membrane protein HopM; putative signal peptide 1393367 12361158 HPGAM_06930 Helicobacter pylori Gambia94/24 Outer membrane protein HopM; putative signal peptide YP_005781050.1 1391280 D 907240 CDS YP_005781051.1 385219576 12361159 complement(1393377..1393490) 1 NC_017371.1 hypothetical protein 1393490 12361159 HPGAM_06935 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781051.1 1393377 R 907240 CDS YP_005781052.1 385219577 12361160 complement(1393510..1394238) 1 NC_017371.1 COG0861 Membrane protein TerC, possibly involved in tellurium resistance; hypothetical protein 1394238 12361160 HPGAM_06940 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781052.1 1393510 R 907240 CDS YP_005781053.1 385219578 12361161 1394168..1394272 1 NC_017371.1 hypothetical protein 1394272 12361161 HPGAM_06945 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781053.1 1394168 D 907240 CDS YP_005781054.1 385219579 12361162 complement(1394245..1395201) 1 NC_017371.1 COG0598 Mg2+ and Co2+ transporters; magnesium and cobalt transport protein 1395201 12361162 HPGAM_06950 Helicobacter pylori Gambia94/24 magnesium and cobalt transport protein YP_005781054.1 1394245 R 907240 CDS YP_005781055.1 385219580 12361163 complement(1395217..1396425) 1 NC_017371.1 COG0126 3-phosphoglycerate kinase; phosphoglycerate kinase 1396425 pgk 12361163 pgk Helicobacter pylori Gambia94/24 phosphoglycerate kinase YP_005781055.1 1395217 R 907240 CDS YP_005781056.1 385219581 12361164 complement(1396440..1397432) 1 NC_017371.1 COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; glyceraldehyde-3-phosphate dehydrogenase 1397432 12361164 HPGAM_06960 Helicobacter pylori Gambia94/24 glyceraldehyde-3-phosphate dehydrogenase YP_005781056.1 1396440 R 907240 CDS YP_005781057.1 385219582 12361165 complement(1397521..1398222) 1 NC_017371.1 COG0692 Uracil DNA glycosylase; uracil-DNA glycosylase 1398222 12361165 HPGAM_06965 Helicobacter pylori Gambia94/24 uracil-DNA glycosylase YP_005781057.1 1397521 R 907240 CDS YP_005781058.1 385219583 12361166 complement(1398219..1398932) 1 NC_017371.1 COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; 1-acyl-sn-glycerol-3-phosphate acyltransferase 1398932 12361166 HPGAM_06970 Helicobacter pylori Gambia94/24 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005781058.1 1398219 R 907240 CDS YP_005781059.1 385219584 12361167 complement(1398919..1400082) 1 NC_017371.1 hypothetical protein 1400082 12361167 HPGAM_06975 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781059.1 1398919 R 907240 CDS YP_005781060.1 385219585 12361168 complement(1400089..1401453) 1 NC_017371.1 COG0793 Periplasmic protease; carboxyl-terminal protease 1401453 12361168 HPGAM_06980 Helicobacter pylori Gambia94/24 carboxyl-terminal protease YP_005781060.1 1400089 R 907240 CDS YP_005781061.1 385219586 12361169 complement(1401678..1402550) 1 NC_017371.1 hypothetical protein 1402550 12361169 HPGAM_06985 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781061.1 1401678 R 907240 CDS YP_005781062.1 385219587 12361170 complement(1402550..1403629) 1 NC_017371.1 COG0863 DNA modification methylase; type II DNA modification (methyltransferase) 1403629 12361170 HPGAM_06990 Helicobacter pylori Gambia94/24 type II DNA modification (methyltransferase) YP_005781062.1 1402550 R 907240 CDS YP_005781063.1 385219588 12361171 1404633..1404743 1 NC_017371.1 hypothetical protein 1404743 12361171 HPGAM_07000 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781063.1 1404633 D 907240 CDS YP_005781064.1 385219589 12361172 complement(1405071..1407497) 1 NC_017371.1 COG0286 Type I restriction-modification system methyltransferase subunit; adenine specific DNA methyltransferase 1407497 12361172 HPGAM_07010 Helicobacter pylori Gambia94/24 adenine specific DNA methyltransferase YP_005781064.1 1405071 R 907240 CDS YP_005781065.1 385219590 12361173 complement(1407522..1408343) 1 NC_017371.1 COG0157 Nicotinate-nucleotide pyrophosphorylase; nicotinate-nucleotide pyrophosphorylase 1408343 12361173 HPGAM_07015 Helicobacter pylori Gambia94/24 nicotinate-nucleotide pyrophosphorylase YP_005781065.1 1407522 R 907240 CDS YP_005781066.1 385219591 12361174 complement(1408343..1409353) 1 NC_017371.1 COG0379 Quinolinate synthase; quinolinate synthetase 1409353 12361174 HPGAM_07020 Helicobacter pylori Gambia94/24 quinolinate synthetase YP_005781066.1 1408343 R 907240 CDS YP_005781067.1 385219592 12361175 complement(1409340..1410146) 1 NC_017371.1 COG0688 Phosphatidylserine decarboxylase; phosphatidylserine decarboxylase 1410146 12361175 HPGAM_07025 Helicobacter pylori Gambia94/24 phosphatidylserine decarboxylase YP_005781067.1 1409340 R 907240 CDS YP_005781068.1 385219593 12361176 complement(1410140..1410646) 1 NC_017371.1 hypothetical protein 1410646 12361176 HPGAM_07030 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781068.1 1410140 R 907240 CDS YP_005781069.1 385219594 12361177 complement(1410659..1411153) 1 NC_017371.1 hypothetical protein 1411153 12361177 HPGAM_07035 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781069.1 1410659 R 907240 CDS YP_005781070.1 385219595 12361178 complement(1411146..1412030) 1 NC_017371.1 COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases; prenyltransferase 1412030 ubiA 12361178 ubiA Helicobacter pylori Gambia94/24 prenyltransferase YP_005781070.1 1411146 R 907240 CDS YP_005781071.1 385219596 12361179 complement(1412059..1413372) 1 NC_017371.1 COG0658 Predicted membrane metal-binding protein; competence protein ComEC 1413372 12361179 HPGAM_07045 Helicobacter pylori Gambia94/24 competence protein ComEC YP_005781071.1 1412059 R 907240 CDS YP_005781072.1 385219597 12361180 complement(1413369..1414844) 1 NC_017371.1 COG0305 Replicative DNA helicase; replicative DNA helicase 1414844 12361180 HPGAM_07050 Helicobacter pylori Gambia94/24 replicative DNA helicase YP_005781072.1 1413369 R 907240 CDS YP_005781073.1 385219598 12361181 complement(1414855..1416249) 1 NC_017371.1 COG0062 Uncharacterized conserved protein; hypothetical protein 1416249 12361181 HPGAM_07055 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781073.1 1414855 R 907240 CDS YP_005781074.1 385219599 12361182 complement(1416252..1417370) 1 NC_017371.1 COG0642 Signal transduction histidine kinase; hypothetical protein 1417370 12361182 HPGAM_07060 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781074.1 1416252 R 907240 CDS YP_005781075.1 385219600 12361183 complement(1417420..1418061) 1 NC_017371.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; putative transcriptional regulator 1418061 12361183 HPGAM_07065 Helicobacter pylori Gambia94/24 putative transcriptional regulator YP_005781075.1 1417420 R 907240 CDS YP_005781076.1 385219601 12361184 complement(1418149..1419420) 1 NC_017371.1 type IIS restriction enzyme R protein (MBOIIR) 1419420 12361184 HPGAM_07070 Helicobacter pylori Gambia94/24 type IIS restriction enzyme R protein (MBOIIR) YP_005781076.1 1418149 R 907240 CDS YP_005781077.1 385219602 12361185 complement(1419436..1420218) 1 NC_017371.1 COG0863 DNA modification methylase; type IIS restriction enzyme M1 protein (mod) 1420218 12361185 HPGAM_07075 Helicobacter pylori Gambia94/24 type IIS restriction enzyme M1 protein (mod) YP_005781077.1 1419436 R 907240 CDS YP_005781078.1 385219603 12361186 complement(1420205..1421068) 1 NC_017371.1 COG0863 DNA modification methylase; type IIS restriction enzyme M2 protein (mod) 1421068 12361186 HPGAM_07080 Helicobacter pylori Gambia94/24 type IIS restriction enzyme M2 protein (mod) YP_005781078.1 1420205 R 907240 CDS YP_005781079.1 385219604 12361187 1421315..1422742 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; type III restriction-modification system: methylase 1422742 12361187 HPGAM_07085 Helicobacter pylori Gambia94/24 type III restriction-modification system: methylase YP_005781079.1 1421315 D 907240 CDS YP_005781080.1 385219605 12361188 1422726..1423796 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA methylase 1423796 12361188 HPGAM_07090 Helicobacter pylori Gambia94/24 adenine-specific DNA methylase YP_005781080.1 1422726 D 907240 CDS YP_005781081.1 385219606 12361189 1423806..1426694 1 NC_017371.1 COG1061 DNA or RNA helicases of superfamily II; type III restriction enzyme R protein 1426694 12361189 HPGAM_07095 Helicobacter pylori Gambia94/24 type III restriction enzyme R protein YP_005781081.1 1423806 D 907240 CDS YP_005781082.1 385219607 12361190 complement(1426726..1427472) 1 NC_017371.1 COG1792 Cell shape-determining protein; rod shape-determining protein MreC 1427472 12361190 HPGAM_07100 Helicobacter pylori Gambia94/24 rod shape-determining protein MreC YP_005781082.1 1426726 R 907240 CDS YP_005781083.1 385219608 12361191 complement(1427476..1428519) 1 NC_017371.1 COG1077 Actin-like ATPase involved in cell morphogenesis; rod shape-determining protein MreB 1428519 12361191 HPGAM_07105 Helicobacter pylori Gambia94/24 rod shape-determining protein MreB YP_005781083.1 1427476 R 907240 CDS YP_005781084.1 385219609 12361192 complement(1428580..1429938) 1 NC_017371.1 COG1219 ATP-dependent protease Clp, ATPase subunit; ATP-dependent protease ATP-binding subunit ClpX 1429938 clpX 12361192 clpX Helicobacter pylori Gambia94/24 ATP-dependent protease ATP-binding subunit ClpX YP_005781084.1 1428580 R 907240 CDS YP_005781085.1 385219610 12361193 complement(1429940..1430752) 1 NC_017371.1 COG1043 Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase; UDP-N-acetylglucosamine acyltransferase 1430752 12361193 HPGAM_07115 Helicobacter pylori Gambia94/24 UDP-N-acetylglucosamine acyltransferase YP_005781085.1 1429940 R 907240 CDS YP_005781086.1 385219611 12361194 complement(1430755..1431234) 1 NC_017371.1 COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases; (3R)-hydroxymyristoyl-ACP dehydratase 1431234 fabZ 12361194 fabZ Helicobacter pylori Gambia94/24 (3R)-hydroxymyristoyl-ACP dehydratase YP_005781086.1 1430755 R 907240 CDS YP_005781087.1 385219612 12361195 complement(1431417..1431806) 1 NC_017371.1 COG1699 Uncharacterized protein conserved in bacteria; flagellar assembly protein FliW 1431806 12361195 HPGAM_07125 Helicobacter pylori Gambia94/24 flagellar assembly protein FliW YP_005781087.1 1431417 R 907240 CDS YP_005781088.1 385219613 12361196 1432024..1432218 1 NC_017371.1 hypothetical protein 1432218 12361196 HPGAM_07130 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781088.1 1432024 D 907240 CDS YP_005781089.1 385219614 12361197 1432209..1432871 1 NC_017371.1 COG4105 DNA uptake lipoprotein; putative lipoprotein 1432871 12361197 HPGAM_07135 Helicobacter pylori Gambia94/24 putative lipoprotein YP_005781089.1 1432209 D 907240 CDS YP_005781090.1 385219615 12361198 1432912..1435401 1 NC_017371.1 COG0466 ATP-dependent Lon protease, bacterial type; ATP-dependent protease La 1435401 12361198 HPGAM_07140 Helicobacter pylori Gambia94/24 ATP-dependent protease La YP_005781090.1 1432912 D 907240 CDS YP_005781091.1 385219616 12361199 1435410..1436237 1 NC_017371.1 COG0287 Prephenate dehydrogenase; prephenate dehydrogenase 1436237 12361199 HPGAM_07145 Helicobacter pylori Gambia94/24 prephenate dehydrogenase YP_005781091.1 1435410 D 907240 CDS YP_005781092.1 385219617 12361200 1436317..1436439 1 NC_017371.1 hypothetical protein 1436439 12361200 HPGAM_07150 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781092.1 1436317 D 907240 CDS YP_005781093.1 385219618 12361201 complement(1436658..1437521) 1 NC_017371.1 COG1864 DNA/RNA endonuclease G, NUC1; putative endonuclease 1437521 12361201 HPGAM_07155 Helicobacter pylori Gambia94/24 putative endonuclease YP_005781093.1 1436658 R 907240 CDS YP_005781094.1 385219619 12361202 complement(1437645..1439612) 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; adenine-specific DNA-methyltransferase 1439612 12361202 HPGAM_07160 Helicobacter pylori Gambia94/24 adenine-specific DNA-methyltransferase YP_005781094.1 1437645 R 907240 CDS YP_005781095.1 385219620 12361203 complement(1439606..1441954) 1 NC_017371.1 COG3421 Uncharacterized protein conserved in bacteria; putative type III restriction enzyme R protein 1441954 12361203 HPGAM_07165 Helicobacter pylori Gambia94/24 putative type III restriction enzyme R protein YP_005781095.1 1439606 R 907240 CDS YP_005781096.1 385219621 12361204 1442367..1443215 1 NC_017371.1 COG0502 Biotin synthase and related enzymes; biotin synthase 1443215 12361204 HPGAM_07170 Helicobacter pylori Gambia94/24 biotin synthase YP_005781096.1 1442367 D 907240 CDS YP_005781097.1 385219622 12361205 1443215..1444093 1 NC_017371.1 COG1295 Predicted membrane protein; putative ribonuclease N 1444093 12361205 HPGAM_07175 Helicobacter pylori Gambia94/24 putative ribonuclease N YP_005781097.1 1443215 D 907240 CDS YP_005781098.1 385219623 12361206 complement(1444121..1444303) 1 NC_017371.1 hypothetical protein 1444303 12361206 HPGAM_07180 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781098.1 1444121 R 907240 CDS YP_005781099.1 385219624 12361209 complement(1448501..1448680) 1 NC_017371.1 hypothetical protein 1448680 12361209 HPGAM_07185 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781099.1 1448501 R 907240 CDS YP_005781100.1 385219625 12361210 1448754..1450478 1 NC_017371.1 COG1479 Uncharacterized conserved protein; hypothetical protein 1450478 12361210 HPGAM_07190 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781100.1 1448754 D 907240 CDS YP_005781101.1 385219626 12361211 1451826..1453613 1 NC_017371.1 hypothetical protein 1453613 12361211 HPGAM_07205 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781101.1 1451826 D 907240 CDS YP_005781102.1 385219627 12361212 complement(1454832..1455278) 1 NC_017371.1 COG0780 Enzyme related to GTP cyclohydrolase I; 7-cyano-7-deazaguanine reductase 1455278 12361212 HPGAM_07220 Helicobacter pylori Gambia94/24 7-cyano-7-deazaguanine reductase YP_005781102.1 1454832 R 907240 CDS YP_005781103.1 385219628 12361213 1455337..1455678 1 NC_017371.1 COG0799 Uncharacterized homolog of plant Iojap protein; hypothetical protein 1455678 12361213 HPGAM_07225 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781103.1 1455337 D 907240 CDS YP_005781104.1 385219629 12361214 1455749..1456582 1 NC_017371.1 COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; tRNA delta(2)-isopentenylpyrophosphate transferase 1456582 miaA 12361214 miaA Helicobacter pylori Gambia94/24 tRNA delta(2)-isopentenylpyrophosphate transferase YP_005781104.1 1455749 D 907240 CDS YP_005781105.1 385219630 12361215 1456583..1457686 1 NC_017371.1 COG1442 Lipopolysaccharide biosynthesis proteins, LPS:glycosyltransferases; lipopolysaccharide biosynthesis protein 1457686 12361215 HPGAM_07235 Helicobacter pylori Gambia94/24 lipopolysaccharide biosynthesis protein YP_005781105.1 1456583 D 907240 CDS YP_005781106.1 385219631 12361217 complement(1459436..1460215) 1 NC_017371.1 COG0812 UDP-N-acetylmuramate dehydrogenase; UDP-N-acetylenolpyruvoylglucosamine reductase 1460215 murB 12361217 murB Helicobacter pylori Gambia94/24 UDP-N-acetylenolpyruvoylglucosamine reductase YP_005781106.1 1459436 R 907240 CDS YP_005781107.1 385219632 12361219 complement(1460219..1460485) 1 NC_017371.1 COG1987 Flagellar biosynthesis pathway, component FliQ; flagellar biosynthesis protein FliQ 1460485 fliQ 12361219 fliQ Helicobacter pylori Gambia94/24 flagellar biosynthesis protein FliQ YP_005781107.1 1460219 R 907240 CDS YP_005781108.1 385219633 12361220 complement(1460496..1461800) 1 NC_017371.1 COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; flagellum-specific ATP synthase 1461800 fliI 12361220 fliI Helicobacter pylori Gambia94/24 flagellum-specific ATP synthase YP_005781108.1 1460496 R 907240 CDS YP_005781109.1 385219634 12361221 complement(1461801..1462715) 1 NC_017371.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; putative type IV secretion system ATPase 1462715 12361221 HPGAM_07265 Helicobacter pylori Gambia94/24 putative type IV secretion system ATPase YP_005781109.1 1461801 R 907240 CDS YP_005781110.1 385219635 12361222 complement(1462732..1465494) 1 NC_017371.1 COG0060 Isoleucyl-tRNA synthetase; isoleucyl-tRNA synthetase 1465494 ileS 12361222 ileS Helicobacter pylori Gambia94/24 isoleucyl-tRNA synthetase YP_005781110.1 1462732 R 907240 CDS YP_005781111.1 385219636 12361223 complement(1465511..1465768) 1 NC_017371.1 COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); hypothetical protein 1465768 12361223 HPGAM_07275 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781111.1 1465511 R 907240 CDS YP_005781112.1 385219637 12361224 1465870..1466490 1 NC_017371.1 hypothetical protein 1466490 12361224 HPGAM_07280 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781112.1 1465870 D 907240 CDS YP_005781113.1 385219638 12361225 complement(1466660..1466917) 1 NC_017371.1 hypothetical protein 1466917 12361225 HPGAM_07285 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781113.1 1466660 R 907240 CDS YP_005781114.1 385219639 12361226 1466929..1467096 1 NC_017371.1 hypothetical protein 1467096 12361226 HPGAM_07290 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781114.1 1466929 D 907240 CDS YP_005781115.1 385219640 12361227 complement(1467108..1467389) 1 NC_017371.1 hypothetical protein 1467389 12361227 HPGAM_07295 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781115.1 1467108 R 907240 CDS YP_005781116.1 385219641 12361228 complement(1467452..1467589) 1 NC_017371.1 hypothetical protein 1467589 12361228 HPGAM_07300 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781116.1 1467452 R 907240 CDS YP_005781117.1 385219642 12361229 1467652..1468467 1 NC_017371.1 COG0030 Dimethyladenosine transferase (rRNA methylation); KsgA/Dim1 family 16S ribosomal RNA methyltransferase 1468467 ksgA 12361229 ksgA Helicobacter pylori Gambia94/24 KsgA/Dim1 family 16S ribosomal RNA methyltransferase YP_005781117.1 1467652 D 907240 CDS YP_005781118.1 385219643 12361230 1468520..1470598 1 NC_017371.1 COG1782 Predicted metal-dependent RNase, consists of a metallo-beta-lactamase domain and an RNA-binding KH domain; hypothetical protein 1470598 12361230 HPGAM_07310 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781118.1 1468520 D 907240 CDS YP_005781119.1 385219644 12361231 1470582..1471571 1 NC_017371.1 COG0794 Predicted sugar phosphate isomerase involved in capsule formation; arabinose-5-phosphate isomerase 1471571 12361231 HPGAM_07315 Helicobacter pylori Gambia94/24 arabinose-5-phosphate isomerase YP_005781119.1 1470582 D 907240 CDS YP_005781120.1 385219645 12361232 1471568..1472641 1 NC_017371.1 COG0820 Predicted Fe-S-cluster redox enzyme; ribosomal RNA large subunit methyltransferase N 1472641 12361232 HPGAM_07320 Helicobacter pylori Gambia94/24 ribosomal RNA large subunit methyltransferase N YP_005781120.1 1471568 D 907240 CDS YP_005781121.1 385219646 12361233 1472794..1472886 1 NC_017371.1 hypothetical protein 1472886 12361233 HPGAM_07325 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781121.1 1472794 D 907240 CDS YP_005781122.1 385219647 12361234 1473112..1473204 1 NC_017371.1 hypothetical protein 1473204 12361234 HPGAM_07330 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781122.1 1473112 D 907240 CDS YP_005781123.1 385219648 12361235 complement(1473286..1473843) 1 NC_017371.1 COG0732 Restriction endonuclease S subunits; type I R-M system specificity subunit 1473843 12361235 HPGAM_07335 Helicobacter pylori Gambia94/24 type I R-M system specificity subunit YP_005781123.1 1473286 R 907240 CDS YP_005781124.1 385219649 12361236 1474666..1476696 1 NC_017371.1 COG3843 Type IV secretory pathway, VirD2 components (relaxase); relaxase 1476696 12361236 HPGAM_07340 Helicobacter pylori Gambia94/24 relaxase YP_005781124.1 1474666 D 907240 CDS YP_005781125.1 385219650 12361237 1477848..1478918 1 NC_017371.1 COG0582 Integrase; integrase/recombinase (xerD) 1478918 12361237 HPGAM_07345 Helicobacter pylori Gambia94/24 integrase/recombinase (xerD) YP_005781125.1 1477848 D 907240 CDS YP_005781126.1 385219651 12361238 complement(1479226..1480029) 1 NC_017371.1 hypothetical protein 1480029 12361238 HPGAM_07350 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781126.1 1479226 R 907240 CDS YP_005781127.1 385219652 12361239 complement(1480001..1480252) 1 NC_017371.1 hypothetical protein 1480252 12361239 HPGAM_07355 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781127.1 1480001 R 907240 CDS YP_005781128.1 385219653 12361240 complement(1480384..1481064) 1 NC_017371.1 hypothetical protein 1481064 12361240 HPGAM_07360 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781128.1 1480384 R 907240 CDS YP_005781129.1 385219654 12361241 1481285..1482298 1 NC_017371.1 hypothetical protein 1482298 12361241 HPGAM_07365 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781129.1 1481285 D 907240 CDS YP_005781130.1 385219655 12361242 complement(1482303..1483580) 1 NC_017371.1 hypothetical protein 1483580 12361242 HPGAM_07370 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781130.1 1482303 R 907240 CDS YP_005781131.1 385219656 12361243 complement(1483577..1484839) 1 NC_017371.1 type IV secretion system protein TrbL 1484839 12361243 HPGAM_07375 Helicobacter pylori Gambia94/24 type IV secretion system protein TrbL YP_005781131.1 1483577 R 907240 CDS YP_005781132.1 385219657 12361244 complement(1484836..1486269) 1 NC_017371.1 hypothetical protein 1486269 12361244 HPGAM_07380 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781132.1 1484836 R 907240 CDS YP_005781133.1 385219658 12361245 complement(1486279..1488324) 1 NC_017371.1 hypothetical protein 1488324 12361245 HPGAM_07385 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781133.1 1486279 R 907240 CDS YP_005781134.1 385219659 12361246 complement(1488324..1489376) 1 NC_017371.1 hypothetical protein 1489376 12361246 HPGAM_07390 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781134.1 1488324 R 907240 CDS YP_005781135.1 385219660 12361247 complement(1489377..1489541) 1 NC_017371.1 hypothetical protein 1489541 12361247 HPGAM_07395 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781135.1 1489377 R 907240 CDS YP_005781136.1 385219661 12361248 1490178..1490846 1 NC_017371.1 COG1192 ATPases involved in chromosome partitioning; hypothetical protein 1490846 12361248 HPGAM_07400 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781136.1 1490178 D 907240 CDS YP_005781137.1 385219662 12361249 1490893..1491270 1 NC_017371.1 hypothetical protein 1491270 12361249 HPGAM_07405 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781137.1 1490893 D 907240 CDS YP_005781138.1 385219663 12361250 1491248..1491913 1 NC_017371.1 hypothetical protein 1491913 12361250 HPGAM_07410 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781138.1 1491248 D 907240 CDS YP_005781139.1 385219664 12361251 complement(1491987..1492790) 1 NC_017371.1 hypothetical protein 1492790 12361251 HPGAM_07415 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781139.1 1491987 R 907240 CDS YP_005781140.1 385219665 12361252 complement(1492760..1493230) 1 NC_017371.1 hypothetical protein 1493230 12361252 HPGAM_07420 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781140.1 1492760 R 907240 CDS YP_005781141.1 385219666 12361253 complement(1493285..1495345) 1 NC_017371.1 COG0550 Topoisomerase IA; DNA topoisomerase I 1495345 12361253 HPGAM_07425 Helicobacter pylori Gambia94/24 DNA topoisomerase I YP_005781141.1 1493285 R 907240 CDS YP_005781142.1 385219667 12361254 complement(1495358..1495759) 1 NC_017371.1 hypothetical protein 1495759 12361254 HPGAM_07430 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781142.1 1495358 R 907240 CDS YP_005781143.1 385219668 12361255 complement(1496059..1496268) 1 NC_017371.1 hypothetical protein 1496268 12361255 HPGAM_07435 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781143.1 1496059 R 907240 CDS YP_005781144.1 385219669 12361256 complement(1496279..1496392) 1 NC_017371.1 hypothetical protein 1496392 12361256 HPGAM_07440 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781144.1 1496279 R 907240 CDS YP_005781145.1 385219670 12361257 complement(1505340..1507244) 1 NC_017371.1 COG3505 Type IV secretory pathway, VirD4 components; VirD4 coupling protein 1507244 12361257 HPGAM_07455 Helicobacter pylori Gambia94/24 VirD4 coupling protein YP_005781145.1 1505340 R 907240 CDS YP_005781146.1 385219671 12361258 complement(1507241..1507759) 1 NC_017371.1 hypothetical protein 1507759 12361258 HPGAM_07460 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781146.1 1507241 R 907240 CDS YP_005781147.1 385219672 12361259 complement(1507756..1508700) 1 NC_017371.1 COG0630 Type IV secretory pathway, VirB11 components, and related ATPases involved in archaeal flagella biosynthesis; VirB11 type IV secretion ATPase 1508700 12361259 HPGAM_07465 Helicobacter pylori Gambia94/24 VirB11 type IV secretion ATPase YP_005781147.1 1507756 R 907240 CDS YP_005781148.1 385219673 12361260 complement(1508705..1508899) 1 NC_017371.1 hypothetical protein 1508899 12361260 HPGAM_07470 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781148.1 1508705 R 907240 CDS YP_005781149.1 385219674 12361261 complement(1508993..1509955) 1 NC_017371.1 COG0013 Alanyl-tRNA synthetase; hypothetical protein 1509955 12361261 HPGAM_07475 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781149.1 1508993 R 907240 CDS YP_005781150.1 385219675 12361262 complement(1509968..1512208) 1 NC_017371.1 hypothetical protein 1512208 12361262 HPGAM_07480 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781150.1 1509968 R 907240 CDS YP_005781151.1 385219676 12361263 complement(1512192..1513400) 1 NC_017371.1 COG2948 Type IV secretory pathway, VirB10 components; VirB10 type IV secretion protein 1513400 12361263 HPGAM_07485 Helicobacter pylori Gambia94/24 VirB10 type IV secretion protein YP_005781151.1 1512192 R 907240 CDS YP_005781152.1 385219677 12361264 complement(1513397..1515052) 1 NC_017371.1 COG3504 Type IV secretory pathway, VirB9 components; type IV secretion system protein VirB9 1515052 12361264 HPGAM_07490 Helicobacter pylori Gambia94/24 type IV secretion system protein VirB9 YP_005781152.1 1513397 R 907240 CDS YP_005781153.1 385219678 12361265 complement(1515049..1516185) 1 NC_017371.1 COG3736 Type IV secretory pathway, component VirB8; VirB8 type IV secretion protein 1516185 12361265 HPGAM_07495 Helicobacter pylori Gambia94/24 VirB8 type IV secretion protein YP_005781153.1 1515049 R 907240 CDS YP_005781154.1 385219679 12361266 complement(1516178..1516318) 1 NC_017371.1 VirB7 type IV secretion protein 1516318 12361266 HPGAM_07500 Helicobacter pylori Gambia94/24 VirB7 type IV secretion protein YP_005781154.1 1516178 R 907240 CDS YP_005781155.1 385219680 12361267 complement(1516315..1518891) 1 NC_017371.1 COG3451 Type IV secretory pathway, VirB4 components; VirB4 type IV secretion ATPase 1518891 12361267 HPGAM_07505 Helicobacter pylori Gambia94/24 VirB4 type IV secretion ATPase YP_005781155.1 1516315 R 907240 CDS YP_005781156.1 385219681 12361268 complement(1518891..1519127) 1 NC_017371.1 hypothetical protein 1519127 12361268 HPGAM_07510 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781156.1 1518891 R 907240 CDS YP_005781157.1 385219682 12361269 complement(1519139..1519402) 1 NC_017371.1 hypothetical protein 1519402 12361269 HPGAM_07515 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781157.1 1519139 R 907240 CDS YP_005781158.1 385219683 12361270 complement(1519414..1519698) 1 NC_017371.1 hypothetical protein 1519698 12361270 HPGAM_07520 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781158.1 1519414 R 907240 CDS YP_005781159.1 385219684 12361271 complement(1519686..1520174) 1 NC_017371.1 hypothetical protein 1520174 12361271 HPGAM_07525 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781159.1 1519686 R 907240 CDS YP_005781160.1 385219685 12361272 complement(1520167..1520397) 1 NC_017371.1 hypothetical protein 1520397 12361272 HPGAM_07530 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781160.1 1520167 R 907240 CDS YP_005781161.1 385219686 12361273 complement(1520400..1521188) 1 NC_017371.1 hypothetical protein 1521188 12361273 HPGAM_07535 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781161.1 1520400 R 907240 CDS YP_005781162.1 385219687 12361274 complement(1521166..1521714) 1 NC_017371.1 COG0732 Restriction endonuclease S subunits; putative type I restriction enzyme 1521714 12361274 HPGAM_07540 Helicobacter pylori Gambia94/24 putative type I restriction enzyme YP_005781162.1 1521166 R 907240 CDS YP_005781163.1 385219688 12361275 complement(1521756..1522637) 1 NC_017371.1 COG0788 Formyltetrahydrofolate hydrolase; formyltetrahydrofolate deformylase 1522637 12361275 HPGAM_07545 Helicobacter pylori Gambia94/24 formyltetrahydrofolate deformylase YP_005781163.1 1521756 R 907240 CDS YP_005781164.1 385219689 12361276 complement(1522640..1523518) 1 NC_017371.1 COG0616 Periplasmic serine proteases (ClpP class); putative protease IV 1523518 12361276 HPGAM_07550 Helicobacter pylori Gambia94/24 putative protease IV YP_005781164.1 1522640 R 907240 CDS YP_005781165.1 385219690 12361277 1523589..1523849 1 NC_017371.1 hypothetical protein 1523849 12361277 HPGAM_07555 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781165.1 1523589 D 907240 CDS YP_005781166.1 385219691 12361278 1524052..1524732 1 NC_017371.1 hypothetical protein 1524732 12361278 HPGAM_07560 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781166.1 1524052 D 907240 CDS YP_005781167.1 385219692 12361279 1524741..1525217 1 NC_017371.1 COG0807 GTP cyclohydrolase II; hypothetical protein 1525217 12361279 HPGAM_07565 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781167.1 1524741 D 907240 CDS YP_005781168.1 385219693 12361280 1525227..1525661 1 NC_017371.1 hypothetical protein 1525661 12361280 HPGAM_07570 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781168.1 1525227 D 907240 CDS YP_005781169.1 385219694 12361282 complement(1528620..1529399) 1 NC_017371.1 hypothetical protein 1529399 12361282 HPGAM_07575 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781169.1 1528620 R 907240 CDS YP_005781170.1 385219695 12361283 1529523..1530011 1 NC_017371.1 COG0652 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family; peptidyl-prolyl cis-trans isomerase 1530011 12361283 HPGAM_07580 Helicobacter pylori Gambia94/24 peptidyl-prolyl cis-trans isomerase YP_005781170.1 1529523 D 907240 CDS YP_005781171.1 385219696 12361284 1530029..1530259 1 NC_017371.1 COG1551 Carbon storage regulator (could also regulate swarming and quorum sensing); carbon storage regulator 1530259 12361284 HPGAM_07585 Helicobacter pylori Gambia94/24 carbon storage regulator YP_005781171.1 1530029 D 907240 CDS YP_005781172.1 385219697 12361285 1530256..1531080 1 NC_017371.1 COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1531080 12361285 HPGAM_07590 Helicobacter pylori Gambia94/24 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_005781172.1 1530256 D 907240 CDS YP_005781173.1 385219698 12361286 1531058..1531516 1 NC_017371.1 COG0691 tmRNA-binding protein; SsrA-binding protein 1531516 smpB 12361286 smpB Helicobacter pylori Gambia94/24 SsrA-binding protein YP_005781173.1 1531058 D 907240 CDS YP_005781174.1 385219699 12361287 1531519..1531971 1 NC_017371.1 COG0811 Biopolymer transport proteins; biopolymer transport protein 1531971 12361287 HPGAM_07600 Helicobacter pylori Gambia94/24 biopolymer transport protein YP_005781174.1 1531519 D 907240 CDS YP_005781175.1 385219700 12361288 complement(1531900..1532019) 1 NC_017371.1 hypothetical protein 1532019 12361288 HPGAM_07605 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781175.1 1531900 R 907240 CDS YP_005781176.1 385219701 12361289 1531982..1532383 1 NC_017371.1 COG0848 Biopolymer transport protein; biopolymer transport protein 1532383 12361289 HPGAM_07610 Helicobacter pylori Gambia94/24 biopolymer transport protein YP_005781176.1 1531982 D 907240 CDS YP_005781177.1 385219702 12361291 1532455..1532589 1 NC_017371.1 COG0230 Ribosomal protein L34; 50S ribosomal protein L34 1532589 rpmH 12361291 rpmH Helicobacter pylori Gambia94/24 50S ribosomal protein L34 YP_005781177.1 1532455 D 907240 CDS YP_005781178.1 385219703 12361292 1532549..1533034 1 NC_017371.1 COG0594 RNase P protein component; ribonuclease P protein component 1533034 12361292 HPGAM_07620 Helicobacter pylori Gambia94/24 ribonuclease P protein component YP_005781178.1 1532549 D 907240 CDS YP_005781179.1 385219704 12361293 1533021..1533374 1 NC_017371.1 COG0759 Uncharacterized conserved protein; hypothetical protein 1533374 12361293 HPGAM_07625 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781179.1 1533021 D 907240 CDS YP_005781180.1 385219705 12361294 1533380..1535023 1 NC_017371.1 COG0706 Preprotein translocase subunit YidC; membrane protein insertase 1535023 12361294 HPGAM_07630 Helicobacter pylori Gambia94/24 membrane protein insertase YP_005781180.1 1533380 D 907240 CDS YP_005781181.1 385219706 12361295 1535037..1535813 1 NC_017371.1 COG1315 Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain; hypothetical protein 1535813 12361295 HPGAM_07635 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781181.1 1535037 D 907240 CDS YP_005781182.1 385219707 12361296 1535806..1537158 1 NC_017371.1 COG0486 Predicted GTPase; tRNA modification GTPase TrmE 1537158 trmE 12361296 trmE Helicobacter pylori Gambia94/24 tRNA modification GTPase TrmE YP_005781182.1 1535806 D 907240 CDS YP_005781183.1 385219708 12361297 1537361..1539601 1 NC_017371.1 putative Outer membrane protein 1539601 12361297 HPGAM_07645 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005781183.1 1537361 D 907240 CDS YP_005781184.1 385219709 12361298 complement(1539618..1539782) 1 NC_017371.1 hypothetical protein 1539782 12361298 HPGAM_07650 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781184.1 1539618 R 907240 CDS YP_005781185.1 385219710 12361299 complement(1540201..1541112) 1 NC_017371.1 hypothetical protein 1541112 12361299 HPGAM_07655 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781185.1 1540201 R 907240 CDS YP_005781186.1 385219711 12361300 complement(1541122..1541463) 1 NC_017371.1 hypothetical protein 1541463 12361300 HPGAM_07660 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781186.1 1541122 R 907240 CDS YP_005781187.1 385219712 12361301 complement(1541471..1541998) 1 NC_017371.1 membrane-associated lipoprotein 1541998 12361301 HPGAM_07665 Helicobacter pylori Gambia94/24 membrane-associated lipoprotein YP_005781187.1 1541471 R 907240 CDS YP_005781188.1 385219713 12361302 complement(1542022..1542654) 1 NC_017371.1 collagen-binding surface adhesin SpaP 1542654 12361302 HPGAM_07670 Helicobacter pylori Gambia94/24 collagen-binding surface adhesin SpaP YP_005781188.1 1542022 R 907240 CDS YP_005781189.1 385219714 12361303 complement(1543013..1543327) 1 NC_017371.1 COG0526 Thiol-disulfide isomerase and thioredoxins; thioredoxin 1543327 12361303 HPGAM_07675 Helicobacter pylori Gambia94/24 thioredoxin YP_005781189.1 1543013 R 907240 CDS YP_005781190.1 385219715 12361304 complement(1543383..1544156) 1 NC_017371.1 COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases; hypothetical protein 1544156 12361304 HPGAM_07680 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781190.1 1543383 R 907240 CDS YP_005781191.1 385219716 12361305 complement(1544153..1547788) 1 NC_017371.1 COG0587 DNA polymerase III, alpha subunit; DNA polymerase III subunit alpha 1547788 dnaE 12361305 dnaE Helicobacter pylori Gambia94/24 DNA polymerase III subunit alpha YP_005781191.1 1544153 R 907240 CDS YP_005781192.1 385219717 12361306 1547937..1548989 1 NC_017371.1 COG1858 Cytochrome c peroxidase; cytochrome c551 peroxidase 1548989 12361306 HPGAM_07690 Helicobacter pylori Gambia94/24 cytochrome c551 peroxidase YP_005781192.1 1547937 D 907240 CDS YP_005781193.1 385219718 12361307 complement(1549288..1549875) 1 NC_017371.1 COG3187 Heat shock protein; putative secreted motility protein 1549875 12361307 HPGAM_07695 Helicobacter pylori Gambia94/24 putative secreted motility protein YP_005781193.1 1549288 R 907240 CDS YP_005781194.1 385219719 12361308 complement(1549892..1550569) 1 NC_017371.1 hypothetical protein 1550569 12361308 HPGAM_07700 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781194.1 1549892 R 907240 CDS YP_005781195.1 385219720 12361309 complement(1550572..1551387) 1 NC_017371.1 COG1463 ABC-type transport system involved in resistance to organic solvents, periplasmic component; ABC transport system substrate binding protein 1551387 12361309 HPGAM_07705 Helicobacter pylori Gambia94/24 ABC transport system substrate binding protein YP_005781195.1 1550572 R 907240 CDS YP_005781196.1 385219721 12361310 complement(1551372..1552157) 1 NC_017371.1 COG1127 ABC-type transport system involved in resistance to organic solvents, ATPase component; ABC transporter ATP-binding protein 1552157 12361310 HPGAM_07710 Helicobacter pylori Gambia94/24 ABC transporter ATP-binding protein YP_005781196.1 1551372 R 907240 CDS YP_005781197.1 385219722 12361311 complement(1552157..1553290) 1 NC_017371.1 COG0767 ABC-type transport system involved in resistance to organic solvents, permease component; hypothetical protein 1553290 12361311 HPGAM_07715 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781197.1 1552157 R 907240 CDS YP_005781198.1 385219723 12361312 1553424..1554119 1 NC_017371.1 putative Outer membrane protein 1554119 12361312 HPGAM_07720 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005781198.1 1553424 D 907240 CDS YP_005781199.1 385219724 12361313 complement(1554124..1555146) 1 NC_017371.1 COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; branched-chain amino acid aminotransferase 1555146 12361313 HPGAM_07725 Helicobacter pylori Gambia94/24 branched-chain amino acid aminotransferase YP_005781199.1 1554124 R 907240 CDS YP_005781200.1 385219725 12361314 complement(1555197..1555943) 1 NC_017371.1 outer membrane protein 1555943 12361314 HPGAM_07730 Helicobacter pylori Gambia94/24 outer membrane protein YP_005781200.1 1555197 R 907240 CDS YP_005781201.1 385219726 12361315 complement(1556057..1558774) 1 NC_017371.1 COG0258 5'-3' exonuclease (including N-terminal domain of PolI); DNA polymerase I 1558774 12361315 HPGAM_07735 Helicobacter pylori Gambia94/24 DNA polymerase I YP_005781201.1 1556057 R 907240 CDS YP_005781202.1 385219727 12361316 complement(1558846..1559487) 1 NC_017371.1 type II restriction enzyme 1559487 12361316 HPGAM_07740 Helicobacter pylori Gambia94/24 type II restriction enzyme YP_005781202.1 1558846 R 907240 CDS YP_005781203.1 385219728 12361317 complement(1559484..1561520) 1 NC_017371.1 COG0286 Type I restriction-modification system methyltransferase subunit; putative type II DNA modification enzyme (methyltransferase) 1561520 12361317 HPGAM_07745 Helicobacter pylori Gambia94/24 putative type II DNA modification enzyme (methyltransferase) YP_005781203.1 1559484 R 907240 CDS YP_005781204.1 385219729 12361318 complement(1561552..1562127) 1 NC_017371.1 hypothetical protein 1562127 12361318 HPGAM_07750 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781204.1 1561552 R 907240 CDS YP_005781205.1 385219730 12361319 complement(1562115..1562690) 1 NC_017371.1 COG0125 Thymidylate kinase; thymidylate kinase 1562690 tmk 12361319 tmk Helicobacter pylori Gambia94/24 thymidylate kinase YP_005781205.1 1562115 R 907240 CDS YP_005781206.1 385219731 12361320 complement(1562692..1563165) 1 NC_017371.1 COG0669 Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltransferase 1563165 coaD 12361320 coaD Helicobacter pylori Gambia94/24 phosphopantetheine adenylyltransferase YP_005781206.1 1562692 R 907240 CDS YP_005781207.1 385219732 12361321 complement(1563165..1563728) 1 NC_017371.1 COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1563728 12361321 HPGAM_07765 Helicobacter pylori Gambia94/24 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_005781207.1 1563165 R 907240 CDS YP_005781208.1 385219733 12361322 1563709..1563813 1 NC_017371.1 hypothetical protein 1563813 12361322 HPGAM_07770 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781208.1 1563709 D 907240 CDS YP_005781209.1 385219734 12361323 complement(1563738..1564394) 1 NC_017371.1 COG4108 Peptide chain release factor RF-3; flagellar basal body P-ring biosynthesis protein FlgA 1564394 flgA 12361323 flgA Helicobacter pylori Gambia94/24 flagellar basal body P-ring biosynthesis protein FlgA YP_005781209.1 1563738 R 907240 CDS YP_005781210.1 385219735 12361324 complement(1564391..1566436) 1 NC_017371.1 COG0210 Superfamily I DNA and RNA helicases; putative ATP-dependent DNA helicase 1566436 12361324 HPGAM_07780 Helicobacter pylori Gambia94/24 putative ATP-dependent DNA helicase YP_005781210.1 1564391 R 907240 CDS YP_005781211.1 385219736 12361325 complement(1566436..1568961) 1 NC_017371.1 COG0457 FOG: TPR repeat; hypothetical protein 1568961 12361325 HPGAM_07785 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781211.1 1566436 R 907240 CDS YP_005781212.1 385219737 12361326 complement(1568971..1570218) 1 NC_017371.1 COG0172 Seryl-tRNA synthetase; seryl-tRNA synthetase 1570218 12361326 HPGAM_07790 Helicobacter pylori Gambia94/24 seryl-tRNA synthetase YP_005781212.1 1568971 R 907240 CDS YP_005781213.1 385219738 12361327 complement(1570219..1571016) 1 NC_017371.1 COG0388 Predicted amidohydrolase; hypothetical protein 1571016 12361327 HPGAM_07795 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781213.1 1570219 R 907240 CDS YP_005781214.1 385219739 12361328 complement(1571020..1571280) 1 NC_017371.1 COG1722 Exonuclease VII small subunit; exodeoxyribonuclease VII small subunit 1571280 12361328 HPGAM_07800 Helicobacter pylori Gambia94/24 exodeoxyribonuclease VII small subunit YP_005781214.1 1571020 R 907240 CDS YP_005781215.1 385219740 12361329 complement(1571290..1572030) 1 NC_017371.1 COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; ubiquinone/menaquinone biosynthesis methyltransferase 1572030 ubiE 12361329 ubiE Helicobacter pylori Gambia94/24 ubiquinone/menaquinone biosynthesis methyltransferase YP_005781215.1 1571290 R 907240 CDS YP_005781216.1 385219741 12361330 complement(1572040..1572486) 1 NC_017371.1 COG1981 Predicted membrane protein; hypothetical protein 1572486 12361330 HPGAM_07810 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781216.1 1572040 R 907240 CDS YP_005781217.1 385219742 12361331 complement(1572500..1573069) 1 NC_017371.1 COG1739 Uncharacterized conserved protein; X-Pro dipeptidase 1573069 12361331 HPGAM_07815 Helicobacter pylori Gambia94/24 X-Pro dipeptidase YP_005781217.1 1572500 R 907240 CDS YP_005781218.1 385219743 12361332 complement(1573056..1574186) 1 NC_017371.1 COG0842 ABC-type multidrug transport system, permease component; antibiotic transport system permease 1574186 12361332 HPGAM_07820 Helicobacter pylori Gambia94/24 antibiotic transport system permease YP_005781218.1 1573056 R 907240 CDS YP_005781219.1 385219744 12361333 complement(1574183..1575280) 1 NC_017371.1 COG0842 ABC-type multidrug transport system, permease component; hypothetical protein 1575280 12361333 HPGAM_07825 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781219.1 1574183 R 907240 CDS YP_005781220.1 385219745 12361334 complement(1575292..1576281) 1 NC_017371.1 COG0845 Membrane-fusion protein; hypothetical protein 1576281 12361334 HPGAM_07830 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781220.1 1575292 R 907240 CDS YP_005781221.1 385219746 12361335 complement(1576293..1577825) 1 NC_017371.1 COG1538 Outer membrane protein; outer membrane efflux protein 1577825 12361335 HPGAM_07835 Helicobacter pylori Gambia94/24 outer membrane efflux protein YP_005781221.1 1576293 R 907240 CDS YP_005781222.1 385219747 12361336 complement(1577822..1579171) 1 NC_017371.1 COG1253 Hemolysins and related proteins containing CBS domains; hypothetical protein 1579171 12361336 HPGAM_07840 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781222.1 1577822 R 907240 CDS YP_005781223.1 385219748 12361337 complement(1579275..1580876) 1 NC_017371.1 COG0306 Phosphate/sulphate permeases; phosphate permease 1580876 12361337 HPGAM_07845 Helicobacter pylori Gambia94/24 phosphate permease YP_005781223.1 1579275 R 907240 CDS YP_005781224.1 385219749 12361338 1581017..1581286 1 NC_017371.1 COG0694 Thioredoxin-like proteins and domains; putative nifU-like protein 1581286 12361338 HPGAM_07850 Helicobacter pylori Gambia94/24 putative nifU-like protein YP_005781224.1 1581017 D 907240 CDS YP_005781225.1 385219750 12361339 1581299..1581910 1 NC_017371.1 hypothetical protein 1581910 12361339 HPGAM_07855 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781225.1 1581299 D 907240 CDS YP_005781226.1 385219751 12361340 1581914..1583257 1 NC_017371.1 COG0769 UDP-N-acetylmuramyl tripeptide synthase; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1583257 murE 12361340 murE Helicobacter pylori Gambia94/24 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_005781226.1 1581914 D 907240 CDS YP_005781227.1 385219752 12361341 1583260..1584210 1 NC_017371.1 COG0176 Transaldolase; transaldolase 1584210 12361341 HPGAM_07865 Helicobacter pylori Gambia94/24 transaldolase YP_005781227.1 1583260 D 907240 CDS YP_005781228.1 385219753 12361342 1584265..1584801 1 NC_017371.1 COG1825 Ribosomal protein L25 (general stress protein Ctc); 50S ribosomal protein L25/general stress protein Ctc 1584801 12361342 HPGAM_07870 Helicobacter pylori Gambia94/24 50S ribosomal protein L25/general stress protein Ctc YP_005781228.1 1584265 D 907240 CDS YP_005781229.1 385219754 12361343 1584811..1585371 1 NC_017371.1 COG0193 Peptidyl-tRNA hydrolase; peptidyl-tRNA hydrolase 1585371 12361343 HPGAM_07875 Helicobacter pylori Gambia94/24 peptidyl-tRNA hydrolase YP_005781229.1 1584811 D 907240 CDS YP_005781230.1 385219755 12361344 1585381..1586448 1 NC_017371.1 COG0795 Predicted permeases; hypothetical protein 1586448 12361344 HPGAM_07880 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781230.1 1585381 D 907240 CDS YP_005781231.1 385219756 12361345 1586504..1587505 1 NC_017371.1 COG3392 Adenine-specific DNA methylase; putative type II methylase 1587505 12361345 HPGAM_07885 Helicobacter pylori Gambia94/24 putative type II methylase YP_005781231.1 1586504 D 907240 CDS YP_005781232.1 385219757 12361346 1587556..1588410 1 NC_017371.1 COG0338 Site-specific DNA methylase; DNA adenine methylase 1588410 12361346 HPGAM_07890 Helicobacter pylori Gambia94/24 DNA adenine methylase YP_005781232.1 1587556 D 907240 CDS YP_005781233.1 385219758 12361347 1588407..1590023 1 NC_017371.1 putative endonuclease 1590023 12361347 HPGAM_07895 Helicobacter pylori Gambia94/24 putative endonuclease YP_005781233.1 1588407 D 907240 CDS YP_005781234.1 385219759 12361348 complement(1590084..1591250) 1 NC_017371.1 putative Outer membrane protein 1591250 12361348 HPGAM_07900 Helicobacter pylori Gambia94/24 putative Outer membrane protein YP_005781234.1 1590084 R 907240 CDS YP_005781235.1 385219760 12361349 1591429..1591866 1 NC_017371.1 COG3399 Uncharacterized protein conserved in bacteria; hypothetical protein 1591866 12361349 HPGAM_07905 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781235.1 1591429 D 907240 CDS YP_005781236.1 385219761 12361350 complement(1591863..1594229) 1 NC_017371.1 COG2217 Cation transport ATPase; putative component of cation transport for cbb3-type oxidase 1594229 12361350 HPGAM_07910 Helicobacter pylori Gambia94/24 putative component of cation transport for cbb3-type oxidase YP_005781236.1 1591863 R 907240 CDS YP_005781237.1 385219762 12361351 complement(1594239..1594955) 1 NC_017371.1 COG4123 Predicted O-methyltransferase; hypothetical protein 1594955 12361351 HPGAM_07915 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781237.1 1594239 R 907240 CDS YP_005781238.1 385219763 12361352 complement(1594937..1595971) 1 NC_017371.1 COG0117 Pyrimidine deaminase; riboflavin biosynthesis protein 1595971 12361352 HPGAM_07920 Helicobacter pylori Gambia94/24 riboflavin biosynthesis protein YP_005781238.1 1594937 R 907240 CDS YP_005781239.1 385219764 12361353 complement(1595975..1597201) 1 NC_017371.1 COG0786 Na+/glutamate symporter; Sodium/glutamate symporter 1597201 12361353 HPGAM_07925 Helicobacter pylori Gambia94/24 Sodium/glutamate symporter YP_005781239.1 1595975 R 907240 CDS YP_005781240.1 385219765 12361354 1597286..1598485 1 NC_017371.1 COG1748 Saccharopine dehydrogenase and related proteins; saccharopine dehydrogenase 1598485 12361354 HPGAM_07930 Helicobacter pylori Gambia94/24 saccharopine dehydrogenase YP_005781240.1 1597286 D 907240 CDS YP_005781241.1 385219766 12361355 complement(1598495..1599871) 1 NC_017371.1 COG0348 Polyferredoxin; ferrodoxin-like protein 1599871 12361355 HPGAM_07935 Helicobacter pylori Gambia94/24 ferrodoxin-like protein YP_005781241.1 1598495 R 907240 CDS YP_005781242.1 385219767 12361356 1599851..1600639 1 NC_017371.1 COG0344 Predicted membrane protein; putative glycerol-3-phosphate acyltransferase PlsY 1600639 12361356 HPGAM_07940 Helicobacter pylori Gambia94/24 putative glycerol-3-phosphate acyltransferase PlsY YP_005781242.1 1599851 D 907240 CDS YP_005781243.1 385219768 12361357 1600636..1600989 1 NC_017371.1 COG1539 Dihydroneopterin aldolase; dihydroneopterin aldolase 1600989 12361357 HPGAM_07945 Helicobacter pylori Gambia94/24 dihydroneopterin aldolase YP_005781243.1 1600636 D 907240 CDS YP_005781244.1 385219769 12361358 1600973..1601275 1 NC_017371.1 hypothetical protein 1601275 12361358 HPGAM_07950 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781244.1 1600973 D 907240 CDS YP_005781245.1 385219770 12361359 1601452..1604091 1 NC_017371.1 COG1629 Outer membrane receptor proteins, mostly Fe transport; iron-regulated outer membrane protein 1604091 12361359 HPGAM_07955 Helicobacter pylori Gambia94/24 iron-regulated outer membrane protein YP_005781245.1 1601452 D 907240 CDS YP_005781246.1 385219771 12361360 1604318..1605478 1 NC_017371.1 COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; selenocysteine synthase 1605478 12361360 HPGAM_07960 Helicobacter pylori Gambia94/24 selenocysteine synthase YP_005781246.1 1604318 D 907240 CDS YP_005781247.1 385219772 12361361 1605574..1606761 1 NC_017371.1 COG0195 Transcription elongation factor; transcription elongation factor NusA 1606761 nusA 12361361 nusA Helicobacter pylori Gambia94/24 transcription elongation factor NusA YP_005781247.1 1605574 D 907240 CDS YP_005781248.1 385219773 12361362 1608069..1608203 1 NC_017371.1 hypothetical protein 1608203 12361362 HPGAM_07980 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781248.1 1608069 D 907240 CDS YP_005781249.1 385219774 12361363 1608231..1608329 1 NC_017371.1 hypothetical protein 1608329 12361363 HPGAM_07985 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781249.1 1608231 D 907240 CDS YP_005781250.1 385219775 12361364 1608532..1608624 1 NC_017371.1 hypothetical protein 1608624 12361364 HPGAM_07990 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781250.1 1608532 D 907240 CDS YP_005781251.1 385219776 12361365 complement(1614780..1617689) 1 NC_017371.1 COG3587 Restriction endonuclease; type III restriction enzyme 1617689 12361365 HPGAM_08015 Helicobacter pylori Gambia94/24 type III restriction enzyme YP_005781251.1 1614780 R 907240 CDS YP_005781252.1 385219777 12361366 complement(1617692..1618279) 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; type III R-M system modification enzyme 1618279 12361366 HPGAM_08020 Helicobacter pylori Gambia94/24 type III R-M system modification enzyme YP_005781252.1 1617692 R 907240 CDS YP_005781253.1 385219778 12361367 complement(1618276..1619658) 1 NC_017371.1 COG2189 Adenine specific DNA methylase Mod; putative type III restriction enzyme M protein (type III adenine specific DNA methyltransferase (Mod)) 1619658 12361367 HPGAM_08025 Helicobacter pylori Gambia94/24 putative type III restriction enzyme M protein (type III adenine specific DNA methyltransferase (Mod)) YP_005781253.1 1618276 R 907240 CDS YP_005781254.1 385219779 12361368 complement(1619710..1621581) 1 NC_017371.1 COG1200 RecG-like helicase; ATP-dependent DNA helicase RecG 1621581 12361368 HPGAM_08030 Helicobacter pylori Gambia94/24 ATP-dependent DNA helicase RecG YP_005781254.1 1619710 R 907240 CDS YP_005781255.1 385219780 12361369 1621658..1621996 1 NC_017371.1 hypothetical protein 1621996 12361369 HPGAM_08035 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781255.1 1621658 D 907240 CDS YP_005781256.1 385219781 12361370 1622000..1622635 1 NC_017371.1 hypothetical protein 1622635 12361370 HPGAM_08040 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781256.1 1622000 D 907240 CDS YP_005781257.1 385219782 12361371 complement(1622632..1623384) 1 NC_017371.1 COG0708 Exonuclease III; exodeoxyribonuclease III 1623384 12361371 HPGAM_08045 Helicobacter pylori Gambia94/24 exodeoxyribonuclease III YP_005781257.1 1622632 R 907240 CDS YP_005781258.1 385219783 12361373 complement(1623564..1625003) 1 NC_017371.1 hypothetical protein 1625003 12361373 HPGAM_08055 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781258.1 1623564 R 907240 CDS YP_005781259.1 385219784 12361374 complement(1625232..1626605) 1 NC_017371.1 COG0593 ATPase involved in DNA replication initiation; chromosomal replication initiation protein 1626605 dnaA 12361374 dnaA Helicobacter pylori Gambia94/24 chromosomal replication initiation protein YP_005781259.1 1625232 R 907240 CDS YP_005781260.1 385219785 12361375 1626757..1627299 1 NC_017371.1 COG0813 Purine-nucleoside phosphorylase; hypothetical protein 1627299 12361375 HPGAM_08065 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781260.1 1626757 D 907240 CDS YP_005781261.1 385219786 12361376 1627334..1627573 1 NC_017371.1 hypothetical protein 1627573 12361376 HPGAM_08070 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781261.1 1627334 D 907240 CDS YP_005781262.1 385219787 12361377 1627574..1629367 1 NC_017371.1 COG0449 Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains; glucosamine--fructose-6-phosphate aminotransferase 1629367 12361377 HPGAM_08075 Helicobacter pylori Gambia94/24 glucosamine--fructose-6-phosphate aminotransferase YP_005781262.1 1627574 D 907240 CDS YP_005781263.1 385219788 12361378 1629390..1630016 1 NC_017371.1 COG1351 Predicted alternative thymidylate synthase; FAD-dependent thymidylate synthase 1630016 thyX 12361378 thyX Helicobacter pylori Gambia94/24 FAD-dependent thymidylate synthase YP_005781263.1 1629390 D 907240 CDS YP_005781264.1 385219789 12361379 1630165..1630257 1 NC_017371.1 hypothetical protein 1630257 12361379 HPGAM_08085 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781264.1 1630165 D 907240 CDS YP_005781265.1 385219790 12361380 complement(1630263..1630364) 1 NC_017371.1 hypothetical protein 1630364 12361380 HPGAM_08090 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781265.1 1630263 R 907240 CDS YP_005781266.1 385219791 12361381 complement(1630686..1630814) 1 NC_017371.1 hypothetical protein 1630814 12361381 HPGAM_08095 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781266.1 1630686 R 907240 CDS YP_005781267.1 385219792 12361382 complement(1630975..1631598) 1 NC_017371.1 COG0732 Restriction endonuclease S subunits; typeI R-M system specificity subunit 1631598 12361382 HPGAM_08100 Helicobacter pylori Gambia94/24 typeI R-M system specificity subunit YP_005781267.1 1630975 R 907240 CDS YP_005781268.1 385219793 12361383 complement(1631592..1634045) 1 NC_017371.1 COG0286 Type I restriction-modification system methyltransferase subunit; Type I restriction-modification enzyme subunit M 1634045 12361383 HPGAM_08105 Helicobacter pylori Gambia94/24 Type I restriction-modification enzyme subunit M YP_005781268.1 1631592 R 907240 CDS YP_005781269.1 385219794 12361384 1634114..1637089 1 NC_017371.1 COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases; typeI restriction enzyme R protein 1637089 12361384 HPGAM_08110 Helicobacter pylori Gambia94/24 typeI restriction enzyme R protein YP_005781269.1 1634114 D 907240 CDS YP_005781270.1 385219795 12361385 1637089..1637796 1 NC_017371.1 COG1451 Predicted metal-dependent hydrolase; hypothetical protein 1637796 12361385 HPGAM_08115 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781270.1 1637089 D 907240 CDS YP_005781271.1 385219796 12361386 complement(1637880..1640405) 1 NC_017371.1 COG4772 Outer membrane receptor for Fe3+-dicitrate; putative IRON(III) dicitrate transport protein 1640405 12361386 HPGAM_08120 Helicobacter pylori Gambia94/24 putative IRON(III) dicitrate transport protein YP_005781271.1 1637880 R 907240 CDS YP_005781272.1 385219797 12361387 complement(1640980..1641948) 1 NC_017371.1 COG0010 Arginase/agmatinase/formimionoglutamate hydrolase, arginase family; arginase 1641948 12361387 HPGAM_08125 Helicobacter pylori Gambia94/24 arginase YP_005781272.1 1640980 R 907240 CDS YP_005781273.1 385219798 12361388 1642153..1643295 1 NC_017371.1 COG0686 Alanine dehydrogenase; alanine dehydrogenase 1643295 12361388 HPGAM_08130 Helicobacter pylori Gambia94/24 alanine dehydrogenase YP_005781273.1 1642153 D 907240 CDS YP_005781274.1 385219799 12361389 1643563..1644660 1 NC_017371.1 COG1064 Zn-dependent alcohol dehydrogenases; zinc-dependent alcohol dehydrogenase 1644660 12361389 HPGAM_08135 Helicobacter pylori Gambia94/24 zinc-dependent alcohol dehydrogenase YP_005781274.1 1643563 D 907240 CDS YP_005781275.1 385219800 12361390 1644793..1646514 1 NC_017371.1 COG1479 Uncharacterized conserved protein; hypothetical protein 1646514 12361390 HPGAM_08140 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781275.1 1644793 D 907240 CDS YP_005781276.1 385219801 12361391 complement(1646525..1647253) 1 NC_017371.1 hypothetical protein 1647253 12361391 HPGAM_08145 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781276.1 1646525 R 907240 CDS YP_005781277.1 385219802 12361392 1647439..1648293 1 NC_017371.1 COG0061 Predicted sugar kinase; inorganic polyphosphate/ATP-NAD kinase 1648293 12361392 HPGAM_08150 Helicobacter pylori Gambia94/24 inorganic polyphosphate/ATP-NAD kinase YP_005781277.1 1647439 D 907240 CDS YP_005781278.1 385219803 12361393 1648314..1649882 1 NC_017371.1 COG0497 ATPase involved in DNA repair; DNA repair protein RecN 1649882 12361393 HPGAM_08155 Helicobacter pylori Gambia94/24 DNA repair protein RecN YP_005781278.1 1648314 D 907240 CDS YP_005781279.1 385219804 12361394 1649882..1651192 1 NC_017371.1 COG1293 Predicted RNA-binding protein homologous to eukaryotic snRNP; hypothetical protein 1651192 12361394 HPGAM_08160 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781279.1 1649882 D 907240 CDS YP_005781280.1 385219805 12361395 1651212..1651508 1 NC_017371.1 hypothetical protein 1651508 12361395 HPGAM_08165 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781280.1 1651212 D 907240 CDS YP_005781281.1 385219806 12361396 1651662..1652639 1 NC_017371.1 COG0790 FOG: TPR repeat, SEL1 subfamily; hypothetical protein 1652639 12361396 HPGAM_08170 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781281.1 1651662 D 907240 CDS YP_005781282.1 385219807 12361397 complement(1652686..1653549) 1 NC_017371.1 COG0847 DNA polymerase III, epsilon subunit and related 3'-5' exonucleases; DNA polymerase III subunit epsilon 1653549 12361397 HPGAM_08175 Helicobacter pylori Gambia94/24 DNA polymerase III subunit epsilon YP_005781282.1 1652686 R 907240 CDS YP_005781283.1 385219808 12361398 complement(1653527..1654180) 1 NC_017371.1 COG0036 Pentose-5-phosphate-3-epimerase; ribulose-phosphate 3-epimerase 1654180 12361398 HPGAM_08180 Helicobacter pylori Gambia94/24 ribulose-phosphate 3-epimerase YP_005781283.1 1653527 R 907240 CDS YP_005781284.1 385219809 12361399 1654251..1655123 1 NC_017371.1 COG0158 Fructose-1,6-bisphosphatase; fructose-1,6-bisphosphatase 1655123 12361399 HPGAM_08185 Helicobacter pylori Gambia94/24 fructose-1,6-bisphosphatase YP_005781284.1 1654251 D 907240 CDS YP_005781285.1 385219810 12361400 1655123..1655326 1 NC_017371.1 hypothetical protein 1655326 12361400 HPGAM_08190 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781285.1 1655123 D 907240 CDS YP_005781286.1 385219811 12361401 1655664..1656497 1 NC_017371.1 type II restriction enzyme 1656497 12361401 HPGAM_08195 Helicobacter pylori Gambia94/24 type II restriction enzyme YP_005781286.1 1655664 D 907240 CDS YP_005781287.1 385219812 12361402 1656585..1657226 1 NC_017371.1 COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; putative transcriptional regulator 1657226 12361402 HPGAM_08200 Helicobacter pylori Gambia94/24 putative transcriptional regulator YP_005781287.1 1656585 D 907240 CDS YP_005781288.1 385219813 12361403 complement(1657405..1658472) 1 NC_017371.1 COG0264 Translation elongation factor Ts; elongation factor Ts 1658472 tsf 12361403 tsf Helicobacter pylori Gambia94/24 elongation factor Ts YP_005781288.1 1657405 R 907240 CDS YP_005781289.1 385219814 12361404 complement(1658472..1659266) 1 NC_017371.1 COG0052 Ribosomal protein S2; 30S ribosomal protein S2 1659266 rpsB 12361404 rpsB Helicobacter pylori Gambia94/24 30S ribosomal protein S2 YP_005781289.1 1658472 R 907240 CDS YP_005781290.1 385219815 12361405 1659516..1662356 1 NC_017371.1 COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); putative recombination protein RecB 1662356 12361405 HPGAM_08215 Helicobacter pylori Gambia94/24 putative recombination protein RecB YP_005781290.1 1659516 D 907240 CDS YP_005781291.1 385219816 12361406 1662380..1663696 1 NC_017371.1 COG3004 Na+/H+ antiporter; pH-dependent sodium/proton antiporter 1663696 nhaA 12361406 nhaA Helicobacter pylori Gambia94/24 pH-dependent sodium/proton antiporter YP_005781291.1 1662380 D 907240 CDS YP_005781292.1 385219817 12361407 1663744..1664127 1 NC_017371.1 COG1862 Preprotein translocase subunit YajC; preprotein translocase subunit YajC 1664127 yajC 12361407 yajC Helicobacter pylori Gambia94/24 preprotein translocase subunit YajC YP_005781292.1 1663744 D 907240 CDS YP_005781293.1 385219818 12361408 1664124..1665701 1 NC_017371.1 COG0342 Preprotein translocase subunit SecD; preprotein translocase subunit SecD 1665701 secD 12361408 secD Helicobacter pylori Gambia94/24 preprotein translocase subunit SecD YP_005781293.1 1664124 D 907240 CDS YP_005781294.1 385219819 12361409 1665710..1666681 1 NC_017371.1 COG0341 Preprotein translocase subunit SecF; preprotein translocase subunit SecF 1666681 secF 12361409 secF Helicobacter pylori Gambia94/24 preprotein translocase subunit SecF YP_005781294.1 1665710 D 907240 CDS YP_005781295.1 385219820 12361410 1666691..1667029 1 NC_017371.1 hypothetical protein 1667029 12361410 HPGAM_08240 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781295.1 1666691 D 907240 CDS YP_005781296.1 385219821 12361411 1667039..1669459 1 NC_017371.1 COG0495 Leucyl-tRNA synthetase; leucyl-tRNA synthetase 1669459 leuS 12361411 leuS Helicobacter pylori Gambia94/24 leucyl-tRNA synthetase YP_005781296.1 1667039 D 907240 CDS YP_005781297.1 385219822 12361412 1669456..1669968 1 NC_017371.1 hypothetical protein 1669968 12361412 HPGAM_08250 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781297.1 1669456 D 907240 CDS YP_005781298.1 385219823 12361413 1669958..1671127 1 NC_017371.1 COG0285 Folylpolyglutamate synthase; folylpolyglutamate synthase 1671127 12361413 HPGAM_08255 Helicobacter pylori Gambia94/24 folylpolyglutamate synthase YP_005781298.1 1669958 D 907240 CDS YP_005781299.1 385219824 12361414 1671127..1672053 1 NC_017371.1 COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 1672053 12361414 HPGAM_08260 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781299.1 1671127 D 907240 CDS YP_005781300.1 385219825 12361415 1672063..1673001 1 NC_017371.1 COG0739 Membrane proteins related to metalloendopeptidases; hypothetical protein 1673001 12361415 HPGAM_08265 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781300.1 1672063 D 907240 CDS YP_005781301.1 385219826 12361416 1672920..1673330 1 NC_017371.1 COG1664 Integral membrane protein CcmA involved in cell shape determination; hypothetical protein 1673330 12361416 HPGAM_08270 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781301.1 1672920 D 907240 CDS YP_005781302.1 385219827 12361417 1673334..1676339 1 NC_017371.1 COG1197 Transcription-repair coupling factor (superfamily II helicase); transcription-repair coupling factor 1676339 12361417 HPGAM_08275 Helicobacter pylori Gambia94/24 transcription-repair coupling factor YP_005781302.1 1673334 D 907240 CDS YP_005781303.1 385219828 12361418 1676464..1676967 1 NC_017371.1 COG0723 Rieske Fe-S protein; ubiquinol-cytochrome c reductase, iron-sulfur subunit 1676967 12361418 HPGAM_08280 Helicobacter pylori Gambia94/24 ubiquinol-cytochrome c reductase, iron-sulfur subunit YP_005781303.1 1676464 D 907240 CDS YP_005781304.1 385219829 12361419 1676978..1678216 1 NC_017371.1 COG1290 Cytochrome b subunit of the bc complex; ubiquinol-cytochrome c reductase cytochrome b subunit 1678216 12361419 HPGAM_08285 Helicobacter pylori Gambia94/24 ubiquinol-cytochrome c reductase cytochrome b subunit YP_005781304.1 1676978 D 907240 CDS YP_005781305.1 385219830 12361420 1678213..1679070 1 NC_017371.1 COG2010 Cytochrome c, mono- and diheme variants; ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit 1679070 12361420 HPGAM_08290 Helicobacter pylori Gambia94/24 ubiquinol cytochrome c oxidoreductase, cytochrome c1 subunit YP_005781305.1 1678213 D 907240 CDS YP_005781306.1 385219831 12361421 1679164..1679277 1 NC_017371.1 hypothetical protein 1679277 12361421 HPGAM_08295 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781306.1 1679164 D 907240 CDS YP_005781307.1 385219832 12361422 1680386..1680922 1 NC_017371.1 COG2194 Predicted membrane-associated, metal-dependent hydrolase; hypothetical protein 1680922 12361422 HPGAM_08310 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781307.1 1680386 D 907240 CDS YP_005781308.1 385219833 12361423 complement(1681319..1683166) 1 NC_017371.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 1683166 12361423 HPGAM_08315 Helicobacter pylori Gambia94/24 penicillin-binding protein YP_005781308.1 1681319 R 907240 CDS YP_005781309.1 385219834 12361424 complement(1683317..1683646) 1 NC_017371.1 COG1677 Flagellar hook-basal body protein; flagellar hook-basal body protein FliE 1683646 fliE 12361424 fliE Helicobacter pylori Gambia94/24 flagellar hook-basal body protein FliE YP_005781309.1 1683317 R 907240 CDS YP_005781310.1 385219835 12361425 complement(1683774..1684259) 1 NC_017371.1 COG1558 Flagellar basal body rod protein; flagellar basal body rod protein FlgC 1684259 flgC 12361425 flgC Helicobacter pylori Gambia94/24 flagellar basal body rod protein FlgC YP_005781310.1 1683774 R 907240 CDS YP_005781311.1 385219836 12361426 complement(1684273..1684695) 1 NC_017371.1 COG1815 Flagellar basal body protein; flagellar basal body rod protein FlgB 1684695 flgB 12361426 flgB Helicobacter pylori Gambia94/24 flagellar basal body rod protein FlgB YP_005781311.1 1684273 R 907240 CDS YP_005781312.1 385219837 12361427 complement(1684682..1684819) 1 NC_017371.1 hypothetical protein 1684819 12361427 HPGAM_08335 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781312.1 1684682 R 907240 CDS YP_005781313.1 385219838 12361428 1684901..1686067 1 NC_017371.1 COG0772 Bacterial cell division membrane protein; cell division protein FtsW 1686067 12361428 HPGAM_08340 Helicobacter pylori Gambia94/24 cell division protein FtsW YP_005781313.1 1684901 D 907240 CDS YP_005781314.1 385219839 12361429 complement(1686087..1687094) 1 NC_017371.1 COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component; ABC-type transport system, periplasmic component; putative signal peptide 1687094 12361429 HPGAM_08345 Helicobacter pylori Gambia94/24 ABC-type transport system, periplasmic component; putative signal peptide YP_005781314.1 1686087 R 907240 CDS YP_005781315.1 385219840 12361430 1687332..1687928 1 NC_017371.1 COG0450 Peroxiredoxin; Alkyl hydroperoxide reductase 1687928 12361430 HPGAM_08350 Helicobacter pylori Gambia94/24 Alkyl hydroperoxide reductase YP_005781315.1 1687332 D 907240 CDS YP_005781316.1 385219841 12361431 1687970..1688101 1 NC_017371.1 hypothetical protein 1688101 12361431 HPGAM_08355 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781316.1 1687970 D 907240 CDS YP_005781317.1 385219842 12361432 1688076..1688891 1 NC_017371.1 COG1464 ABC-type metal ion transport system, periplasmic component/surface antigen; outer membrane protein 1688891 12361432 HPGAM_08360 Helicobacter pylori Gambia94/24 outer membrane protein YP_005781317.1 1688076 D 907240 CDS YP_005781318.1 385219843 12361433 1689182..1689289 1 NC_017371.1 hypothetical protein 1689289 12361433 HPGAM_08365 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781318.1 1689182 D 907240 CDS YP_005781319.1 385219844 12361434 complement(1689383..1691149) 1 NC_017371.1 COG0768 Cell division protein FtsI/penicillin-binding protein 2; penicillin-binding protein 2 1691149 12361434 HPGAM_08370 Helicobacter pylori Gambia94/24 penicillin-binding protein 2 YP_005781319.1 1689383 R 907240 CDS YP_005781320.1 385219845 12361435 complement(1691130..1691573) 1 NC_017371.1 hypothetical protein 1691573 12361435 HPGAM_08375 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781320.1 1691130 R 907240 CDS YP_005781321.1 385219846 12361436 complement(1691585..1692211) 1 NC_017371.1 COG0218 Predicted GTPase; GTP-binding protein YsxC 1692211 engB 12361436 engB Helicobacter pylori Gambia94/24 GTP-binding protein YsxC YP_005781321.1 1691585 R 907240 CDS YP_005781322.1 385219847 12361437 complement(1692208..1692765) 1 NC_017371.1 COG1934 Uncharacterized protein conserved in bacteria; hypothetical protein 1692765 12361437 HPGAM_08385 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781322.1 1692208 R 907240 CDS YP_005781323.1 385219848 12361438 complement(1692765..1693358) 1 NC_017371.1 hypothetical protein 1693358 12361438 HPGAM_08390 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781323.1 1692765 R 907240 CDS YP_005781324.1 385219849 12361439 complement(1693333..1693827) 1 NC_017371.1 COG1778 Low specificity phosphatase (HAD superfamily); 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1693827 12361439 HPGAM_08395 Helicobacter pylori Gambia94/24 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_005781324.1 1693333 R 907240 CDS YP_005781325.1 385219850 12361440 complement(1693824..1694768) 1 NC_017371.1 COG0797 Lipoproteins; rare lipoprotein A 1694768 12361440 HPGAM_08400 Helicobacter pylori Gambia94/24 rare lipoprotein A YP_005781325.1 1693824 R 907240 CDS YP_005781326.1 385219851 12361441 complement(1694768..1695880) 1 NC_017371.1 COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains); regulatory protein DniR 1695880 12361441 HPGAM_08405 Helicobacter pylori Gambia94/24 regulatory protein DniR YP_005781326.1 1694768 R 907240 CDS YP_005781327.1 385219852 12361442 complement(1695976..1696740) 1 NC_017371.1 COG0084 Mg-dependent DNase; hypothetical protein 1696740 12361442 HPGAM_08410 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781327.1 1695976 R 907240 CDS YP_005781328.1 385219853 12361443 1696815..1697435 1 NC_017371.1 COG0307 Riboflavin synthase alpha chain; riboflavin synthase subunit alpha 1697435 12361443 HPGAM_08415 Helicobacter pylori Gambia94/24 riboflavin synthase subunit alpha YP_005781328.1 1696815 D 907240 CDS YP_005781329.1 385219854 12361444 1697436..1697708 1 NC_017371.1 COG2257 Uncharacterized homolog of the cytoplasmic domain of flagellar protein FhlB; hypothetical protein 1697708 12361444 HPGAM_08420 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781329.1 1697436 D 907240 CDS YP_005781330.1 385219855 12361445 1697727..1698710 1 NC_017371.1 COG1135 ABC-type metal ion transport system, ATPase component; DL-methionine transporter ATP-binding subunit 1698710 metN 12361445 metN Helicobacter pylori Gambia94/24 DL-methionine transporter ATP-binding subunit YP_005781330.1 1697727 D 907240 CDS YP_005781331.1 385219856 12361446 1698712..1699359 1 NC_017371.1 COG2011 ABC-type metal ion transport system, permease component; D-methionine transport system permease 1699359 12361446 HPGAM_08430 Helicobacter pylori Gambia94/24 D-methionine transport system permease YP_005781331.1 1698712 D 907240 CDS YP_005781332.1 385219857 12361447 1699442..1699573 1 NC_017371.1 hypothetical protein 1699573 12361447 HPGAM_08435 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781332.1 1699442 D 907240 CDS YP_005781333.1 385219858 12361448 complement(1699549..1699980) 1 NC_017371.1 hypothetical protein 1699980 12361448 HPGAM_08440 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781333.1 1699549 R 907240 CDS YP_005781334.1 385219859 12361449 complement(1699990..1700586) 1 NC_017371.1 COG0671 Membrane-associated phospholipid phosphatase; hypothetical protein 1700586 12361449 HPGAM_08445 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781334.1 1699990 R 907240 CDS YP_005781335.1 385219860 12361450 complement(1700586..1701593) 1 NC_017371.1 COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N-acetylglucosamine-1-phosphate transferase; putative undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase 1701593 12361450 HPGAM_08450 Helicobacter pylori Gambia94/24 putative undecaprenyl-phosphate-alpha-N- acetylglucosaminyltransferase YP_005781335.1 1700586 R 907240 CDS YP_005781336.1 385219861 12361451 1701733..1702521 1 NC_017371.1 COG0854 Pyridoxal phosphate biosynthesis protein; pyridoxine 5'-phosphate synthase 1702521 12361451 HPGAM_08455 Helicobacter pylori Gambia94/24 pyridoxine 5'-phosphate synthase YP_005781336.1 1701733 D 907240 CDS YP_005781337.1 385219862 12361452 1702523..1703446 1 NC_017371.1 COG1995 Pyridoxal phosphate biosynthesis protein; 4-hydroxythreonine-4-phosphate dehydrogenase 1703446 pdxA 12361452 pdxA Helicobacter pylori Gambia94/24 4-hydroxythreonine-4-phosphate dehydrogenase YP_005781337.1 1702523 D 907240 CDS YP_005781338.1 385219863 12361453 1703648..1704670 1 NC_017371.1 COG0533 Metal-dependent proteases with possible chaperone activity; UGMP family protein 1704670 12361453 HPGAM_08465 Helicobacter pylori Gambia94/24 UGMP family protein YP_005781338.1 1703648 D 907240 CDS YP_005781339.1 385219864 12361454 1705549..1706337 1 NC_017371.1 COG4786 Flagellar basal body rod protein; flagellar basal body rod protein FlgG 1706337 flgG 12361454 flgG Helicobacter pylori Gambia94/24 flagellar basal body rod protein FlgG YP_005781339.1 1705549 D 907240 CDS YP_005781340.1 385219865 12361455 complement(1706334..1706432) 1 NC_017371.1 hypothetical protein 1706432 12361455 HPGAM_08475 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781340.1 1706334 R 907240 CDS YP_005781341.1 385219866 12361456 complement(1706436..1706828) 1 NC_017371.1 hypothetical protein 1706828 12361456 HPGAM_08480 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781341.1 1706436 R 907240 CDS YP_005781342.1 385219867 12361457 complement(1706903..1707487) 1 NC_017371.1 COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein 1707487 12361457 HPGAM_08485 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781342.1 1706903 R 907240 CDS YP_005781343.1 385219868 12361458 complement(1708050..1708190) 1 NC_017371.1 hypothetical protein 1708190 12361458 HPGAM_08490 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781343.1 1708050 R 907240 CDS YP_005781344.1 385219869 12361459 complement(1708277..1709038) 1 NC_017371.1 COG4735 Uncharacterized protein conserved in bacteria; hypothetical protein 1709038 12361459 HPGAM_08495 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781344.1 1708277 R 907240 CDS YP_005781345.1 385219870 12361460 complement(1709404..1709562) 1 NC_017371.1 hypothetical protein 1709562 12361460 HPGAM_08500 Helicobacter pylori Gambia94/24 hypothetical protein YP_005781345.1 1709404 R 907240 CDS