-- dump date 20140619_113328 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_002265643.1 208433977 6964448 complement(1..417) 1 NC_011333.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 417 nusB 6964448 nusB Helicobacter pylori G27 transcription antitermination protein NusB YP_002265643.1 1 R 563041 CDS YP_002265644.1 208433978 6962879 complement(419..889) 1 NC_011333.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 889 ribH 6962879 ribH Helicobacter pylori G27 6,7-dimethyl-8-ribityllumazine synthase YP_002265644.1 419 R 563041 CDS YP_002265645.1 208433979 6962880 complement(899..1633) 1 NC_011333.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 1633 6962880 HPG27_3 Helicobacter pylori G27 2-dehydro-3-deoxyphosphooctonate aldolase YP_002265645.1 899 R 563041 CDS YP_002265646.1 208433980 6962881 complement(1716..2381) 1 NC_011333.1 beta-carbonicanhydrase 2381 icfA 6962881 icfA Helicobacter pylori G27 beta-carbonicanhydrase YP_002265646.1 1716 R 563041 CDS YP_002265647.1 208433981 6962882 2503..3186 1 NC_011333.1 type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 3186 6962882 HPG27_5 Helicobacter pylori G27 orotidine 5'-phosphate decarboxylase YP_002265647.1 2503 D 563041 CDS YP_002265648.1 208433982 6962883 3187..4017 1 NC_011333.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 4017 panC 6962883 panC Helicobacter pylori G27 pantoate--beta-alanine ligase YP_002265648.1 3187 D 563041 CDS YP_002265649.1 208433983 6962889 complement(4584..4733) 1 NC_011333.1 hypothetical protein 4733 6962889 HPG27_7 Helicobacter pylori G27 hypothetical protein YP_002265649.1 4584 R 563041 CDS YP_002265650.1 208433984 6962890 complement(5040..7040) 1 NC_011333.1 outer membrane protein 7040 hopZ 6962890 hopZ Helicobacter pylori G27 outer membrane protein YP_002265650.1 5040 R 563041 CDS YP_002265651.1 208433985 6962891 complement(7374..9014) 1 NC_011333.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; chaperonin GroEL 9014 groEL 6962891 groEL Helicobacter pylori G27 chaperonin GroEL YP_002265651.1 7374 R 563041 CDS YP_002265652.1 208433986 6962892 complement(9042..9398) 1 NC_011333.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 9398 groES 6962892 groES Helicobacter pylori G27 co-chaperonin GroES YP_002265652.1 9042 R 563041 CDS YP_002265653.1 208433987 6962893 9684..11363 1 NC_011333.1 synthesizes RNA primers at the replication forks; DNA primase 11363 dnaG 6962893 dnaG Helicobacter pylori G27 DNA primase YP_002265653.1 9684 D 563041 CDS YP_002265654.1 208433988 6962894 11360..12412 1 NC_011333.1 arginino succinate synthase 12412 6962894 HPG27_12 Helicobacter pylori G27 arginino succinate synthase YP_002265654.1 11360 D 563041 CDS YP_002265655.1 208433989 6962895 12502..13329 1 NC_011333.1 hypothetical protein 13329 6962895 HPG27_13 Helicobacter pylori G27 hypothetical protein YP_002265655.1 12502 D 563041 CDS YP_002265656.1 208433990 6962896 13476..13757 1 NC_011333.1 hypothetical protein 13757 6962896 HPG27_14 Helicobacter pylori G27 hypothetical protein YP_002265656.1 13476 D 563041 CDS YP_002265657.1 208433991 6962897 13757..14020 1 NC_011333.1 hypothetical protein 14020 6962897 HPG27_15 Helicobacter pylori G27 hypothetical protein YP_002265657.1 13757 D 563041 CDS YP_002265658.1 208433992 6962898 14022..16385 1 NC_011333.1 ATPase / DNA transfer protein, virB4-like protein 16385 6962898 HPG27_16 Helicobacter pylori G27 ATPase / DNA transfer protein, virB4-like protein YP_002265658.1 14022 D 563041 CDS YP_002265659.1 208433993 6962899 16687..18027 1 NC_011333.1 hypothetical protein 18027 6962899 HPG27_17 Helicobacter pylori G27 hypothetical protein YP_002265659.1 16687 D 563041 CDS YP_002265660.1 208433994 6962900 18135..19100 1 NC_011333.1 chemotaxis protein 19100 cheV1 6962900 cheV1 Helicobacter pylori G27 chemotaxis protein YP_002265660.1 18135 D 563041 CDS YP_002265661.1 208433995 6962901 19097..20314 1 NC_011333.1 carboxynorspermidine decarboxylase 20314 nspC 6962901 nspC Helicobacter pylori G27 carboxynorspermidine decarboxylase YP_002265661.1 19097 D 563041 CDS YP_002265662.1 208433996 6962902 complement(20347..20922) 1 NC_011333.1 inner membrane enzyme; removes 1-phosphate groups from a number of lipid A precursors which provides a point of attachment for to moieties such as phosphoethanolamine which is attached by HP0022; lipid A 1-phosphatase 20922 6962902 HPG27_20 Helicobacter pylori G27 lipid A 1-phosphatase YP_002265662.1 20347 R 563041 CDS YP_002265663.1 208433997 6962903 complement(20932..22497) 1 NC_011333.1 attaches phosphoethanolamine to lipid A at the 1 position of the disaccharide backbone in contrast to other gram-negative bacteria; lipid A phosphoethanolamine transferase 22497 6962903 HPG27_21 Helicobacter pylori G27 lipid A phosphoethanolamine transferase YP_002265663.1 20932 R 563041 CDS YP_002265664.1 208433998 6962904 complement(23157..25289) 1 NC_011333.1 outer membrane protein 25289 hopD 6962904 hopD Helicobacter pylori G27 outer membrane protein YP_002265664.1 23157 R 563041 CDS YP_002265665.1 208433999 6962905 complement(25944..27224) 1 NC_011333.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 27224 gltA 6962905 gltA Helicobacter pylori G27 type II citrate synthase YP_002265665.1 25944 R 563041 CDS YP_002265666.1 208434000 6962906 27425..28702 1 NC_011333.1 isocitrate dehydrogenase 28702 icd 6962906 icd Helicobacter pylori G27 isocitrate dehydrogenase YP_002265666.1 27425 D 563041 CDS YP_002265667.1 208434001 6962907 28764..29297 1 NC_011333.1 hypothetical protein 29297 6962907 HPG27_25 Helicobacter pylori G27 hypothetical protein YP_002265667.1 28764 D 563041 CDS YP_002265668.1 208434002 6962908 complement(29274..29930) 1 NC_011333.1 dethiobiotin synthetase 29930 bioD 6962908 bioD Helicobacter pylori G27 dethiobiotin synthetase YP_002265668.1 29274 R 563041 CDS YP_002265669.1 208434003 6962909 complement(29934..31625) 1 NC_011333.1 hypothetical protein 31625 6962909 HPG27_27 Helicobacter pylori G27 hypothetical protein YP_002265669.1 29934 R 563041 CDS YP_002265670.1 208434004 6962910 31734..32147 1 NC_011333.1 hypothetical protein 32147 6962910 HPG27_28 Helicobacter pylori G27 hypothetical protein YP_002265670.1 31734 D 563041 CDS YP_002265671.1 208434005 6962911 32178..32453 1 NC_011333.1 hypothetical protein 32453 6962911 HPG27_29 Helicobacter pylori G27 hypothetical protein YP_002265671.1 32178 D 563041 CDS YP_002265672.1 208434006 6962912 32453..34678 1 NC_011333.1 ATP-dependent protease 34678 clpA 6962912 clpA Helicobacter pylori G27 ATP-dependent protease YP_002265672.1 32453 D 563041 CDS YP_002265673.1 208434007 6962913 34680..35021 1 NC_011333.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 35021 6962913 HPG27_31 Helicobacter pylori G27 aspartate alpha-decarboxylase YP_002265673.1 34680 D 563041 CDS YP_002265674.1 208434008 6962914 35024..35326 1 NC_011333.1 hypothetical protein 35326 6962914 HPG27_32 Helicobacter pylori G27 hypothetical protein YP_002265674.1 35024 D 563041 CDS YP_002265675.1 208434009 6962915 35326..36321 1 NC_011333.1 hypothetical protein 36321 6962915 HPG27_33 Helicobacter pylori G27 hypothetical protein YP_002265675.1 35326 D 563041 CDS YP_002265676.1 208434010 6962916 36329..37384 1 NC_011333.1 NADH-ubiquinone oxidoreductase subunit 37384 6962916 HPG27_34 Helicobacter pylori G27 NADH-ubiquinone oxidoreductase subunit YP_002265676.1 36329 D 563041 CDS YP_002265677.1 208434011 6962917 37510..38253 1 NC_011333.1 competence protein 38253 comB8-1 6962917 comB8-1 Helicobacter pylori G27 competence protein YP_002265677.1 37510 D 563041 CDS YP_002265678.1 208434012 6962918 38253..39236 1 NC_011333.1 competence protein 39236 comB9 6962918 comB9 Helicobacter pylori G27 competence protein YP_002265678.1 38253 D 563041 CDS YP_002265679.1 208434013 6962919 39253..40365 1 NC_011333.1 competence protein 40365 comB10-1 6962919 comB10-1 Helicobacter pylori G27 competence protein YP_002265679.1 39253 D 563041 CDS YP_002265680.1 208434014 6962920 40437..41855 1 NC_011333.1 mannose-6-phosphate isomerase 41855 algA 6962920 algA Helicobacter pylori G27 mannose-6-phosphate isomerase YP_002265680.1 40437 D 563041 CDS YP_002265681.1 208434015 6962921 41865..43010 1 NC_011333.1 GDP-D-mannosedehydratase 43010 6962921 HPG27_39 Helicobacter pylori G27 GDP-D-mannosedehydratase YP_002265681.1 41865 D 563041 CDS YP_002265682.1 208434016 6962922 43039..43935 1 NC_011333.1 GDP-fucosesynthetase 43935 nolK 6962922 nolK Helicobacter pylori G27 GDP-fucosesynthetase YP_002265682.1 43039 D 563041 CDS YP_002265683.1 208434017 6962923 complement(46226..47224) 1 NC_011333.1 hydrogenase expression/formation protein 47224 hypE 6962923 hypE Helicobacter pylori G27 hydrogenase expression/formation protein YP_002265683.1 46226 R 563041 CDS YP_002265684.1 208434018 6962924 complement(47227..49479) 1 NC_011333.1 transcriptional regulator 49479 hypF 6962924 hypF Helicobacter pylori G27 transcriptional regulator YP_002265684.1 47227 R 563041 CDS YP_002265685.1 208434019 6962925 complement(49476..50468) 1 NC_011333.1 hypothetical protein 50468 6962925 HPG27_43 Helicobacter pylori G27 hypothetical protein YP_002265685.1 49476 R 563041 CDS YP_002265686.1 208434020 6962926 complement(50520..51218) 1 NC_011333.1 adenine specific DNA methyltransferase 51218 6962926 HPG27_44 Helicobacter pylori G27 adenine specific DNA methyltransferase YP_002265686.1 50520 R 563041 CDS YP_002265687.1 208434021 6962927 complement(51215..52060) 1 NC_011333.1 cytosine specific DNA methyltransferase 52060 6962927 HPG27_45 Helicobacter pylori G27 cytosine specific DNA methyltransferase YP_002265687.1 51215 R 563041 CDS YP_002265688.1 208434022 6962928 complement(52457..53503) 1 NC_011333.1 hypothetical protein 53503 6962928 HPG27_46 Helicobacter pylori G27 hypothetical protein YP_002265688.1 52457 R 563041 CDS YP_002265689.1 208434023 6962929 complement(53652..53918) 1 NC_011333.1 hypothetical protein 53918 6962929 HPG27_47 Helicobacter pylori G27 hypothetical protein YP_002265689.1 53652 R 563041 CDS YP_002265690.1 208434024 6962930 complement(53984..54910) 1 NC_011333.1 hypothetical protein 54910 6962930 HPG27_48 Helicobacter pylori G27 hypothetical protein YP_002265690.1 53984 R 563041 CDS YP_002265691.1 208434025 6962932 complement(57419..58909) 1 NC_011333.1 sodium/proline symporter 58909 putP 6962932 putP Helicobacter pylori G27 sodium/proline symporter YP_002265691.1 57419 R 563041 CDS YP_002265692.1 208434026 6962933 complement(58936..62493) 1 NC_011333.1 proline/delta1-pyrroline-5-carboxylate dehydrogenase 62493 6962933 HPG27_51 Helicobacter pylori G27 proline/delta1-pyrroline-5-carboxylate dehydrogenase YP_002265692.1 58936 R 563041 CDS YP_002265693.1 208434027 6962934 62823..63032 1 NC_011333.1 hypothetical protein 63032 6962934 HPG27_52 Helicobacter pylori G27 hypothetical protein YP_002265693.1 62823 D 563041 CDS YP_002265694.1 208434028 6962935 63605..64306 1 NC_011333.1 hypothetical protein 64306 6962935 HPG27_53 Helicobacter pylori G27 hypothetical protein YP_002265694.1 63605 D 563041 CDS YP_002265695.1 208434029 6962936 64308..65042 1 NC_011333.1 hypothetical protein 65042 6962936 HPG27_54 Helicobacter pylori G27 hypothetical protein YP_002265695.1 64308 D 563041 CDS YP_002265696.1 208434030 6962938 67486..68049 1 NC_011333.1 hypothetical protein 68049 6962938 HPG27_56 Helicobacter pylori G27 hypothetical protein YP_002265696.1 67486 D 563041 CDS YP_002265697.1 208434031 6962939 68065..68325 1 NC_011333.1 hypothetical protein 68325 6962939 HPG27_57 Helicobacter pylori G27 hypothetical protein YP_002265697.1 68065 D 563041 CDS YP_002265698.1 208434032 6962941 69772..70131 1 NC_011333.1 hypothetical protein 70131 6962941 HPG27_59 Helicobacter pylori G27 hypothetical protein YP_002265698.1 69772 D 563041 CDS YP_002265699.1 208434033 6962942 70133..70486 1 NC_011333.1 hypothetical protein 70486 6962942 HPG27_60 Helicobacter pylori G27 hypothetical protein YP_002265699.1 70133 D 563041 CDS YP_002265700.1 208434034 6962944 complement(72959..73756) 1 NC_011333.1 urease accessory protein 73756 ureH 6962944 ureH Helicobacter pylori G27 urease accessory protein YP_002265700.1 72959 R 563041 CDS YP_002265701.1 208434035 6962945 complement(73756..74355) 1 NC_011333.1 urease accessory protein 74355 ureG 6962945 ureG Helicobacter pylori G27 urease accessory protein YP_002265701.1 73756 R 563041 CDS YP_002265702.1 208434036 6962947 complement(75171..75683) 1 NC_011333.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 75683 ureE 6962947 ureE Helicobacter pylori G27 urease accessory protein UreE YP_002265702.1 75171 R 563041 CDS YP_002265703.1 208434037 6962948 complement(75685..76272) 1 NC_011333.1 urease accessory protein / pH-dependent urea-transporter 76272 ureI 6962948 ureI Helicobacter pylori G27 urease accessory protein / pH-dependent urea-transporter YP_002265703.1 75685 R 563041 CDS YP_002265704.1 208434038 6962949 complement(76464..78173) 1 NC_011333.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits; urease subunit beta 78173 ureB 6962949 ureB Helicobacter pylori G27 urease subunit beta YP_002265704.1 76464 R 563041 CDS YP_002265705.1 208434039 6962950 complement(78184..78903) 1 NC_011333.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits; urease subunit alpha 78903 ureA 6962950 ureA Helicobacter pylori G27 urease subunit alpha YP_002265705.1 78184 R 563041 CDS YP_002265706.1 208434040 6962952 complement(79249..79695) 1 NC_011333.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 79695 lspA 6962952 lspA Helicobacter pylori G27 lipoprotein signal peptidase YP_002265706.1 79249 R 563041 CDS YP_002265707.1 208434041 6962953 complement(79716..81053) 1 NC_011333.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 81053 glmM 6962953 glmM Helicobacter pylori G27 phosphoglucosamine mutase YP_002265707.1 79716 R 563041 CDS YP_002265708.1 208434042 6962954 81143..81412 1 NC_011333.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 81412 rpsT 6962954 rpsT Helicobacter pylori G27 30S ribosomal protein S20 YP_002265708.1 81143 D 563041 CDS YP_002265709.1 208434043 6962955 81536..82594 1 NC_011333.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 82594 prfA 6962955 prfA Helicobacter pylori G27 peptide chain release factor 1 YP_002265709.1 81536 D 563041 CDS YP_002265710.1 208434044 6962956 82993..83775 1 NC_011333.1 outer membrane protein 83775 horA 6962956 horA Helicobacter pylori G27 outer membrane protein YP_002265710.1 82993 D 563041 CDS YP_002265711.1 208434045 6962957 84023..85756 1 NC_011333.1 hypothetical protein 85756 6962957 HPG27_74 Helicobacter pylori G27 hypothetical protein YP_002265711.1 84023 D 563041 CDS YP_002265712.1 208434046 6962959 complement(88206..88595) 1 NC_011333.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 88595 rpsI 6962959 rpsI Helicobacter pylori G27 30S ribosomal protein S9 YP_002265712.1 88206 R 563041 CDS YP_002265713.1 208434047 6962960 complement(88592..89017) 1 NC_011333.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 89017 rplM 6962960 rplM Helicobacter pylori G27 50S ribosomal protein L13 YP_002265713.1 88592 R 563041 CDS YP_002265714.1 208434048 6962961 complement(89331..89519) 1 NC_011333.1 hypothetical protein 89519 6962961 HPG27_78 Helicobacter pylori G27 hypothetical protein YP_002265714.1 89331 R 563041 CDS YP_002265715.1 208434049 6962962 complement(89526..90872) 1 NC_011333.1 malate:quinone oxidoreductase 90872 6962962 HPG27_79 Helicobacter pylori G27 malate:quinone oxidoreductase YP_002265715.1 89526 R 563041 CDS YP_002265716.1 208434050 6962963 complement(90932..92305) 1 NC_011333.1 hypothetical protein 92305 6962963 HPG27_80 Helicobacter pylori G27 hypothetical protein YP_002265716.1 90932 R 563041 CDS YP_002265717.1 208434051 6962964 complement(92325..94373) 1 NC_011333.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 94373 rpoD 6962964 rpoD Helicobacter pylori G27 RNA polymerase sigma factor RpoD YP_002265717.1 92325 R 563041 CDS YP_002265718.1 208434052 6962965 complement(94567..95262) 1 NC_011333.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 95262 6962965 HPG27_82 Helicobacter pylori G27 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_002265718.1 94567 R 563041 CDS YP_002265719.1 208434053 6962966 complement(95273..96202) 1 NC_011333.1 malonylcoenzymeA-acyl carrier protein transacylase 96202 6962966 HPG27_83 Helicobacter pylori G27 malonylcoenzymeA-acyl carrier protein transacylase YP_002265719.1 95273 R 563041 CDS YP_002265720.1 208434054 6962968 96629..97342 1 NC_011333.1 type II restriction enzyme protein 97342 6962968 HPG27_84 Helicobacter pylori G27 type II restriction enzyme protein YP_002265720.1 96629 D 563041 CDS YP_002265721.1 208434055 6962969 97456..98289 1 NC_011333.1 typeII adenine methyltransferase 98289 6962969 HPG27_85 Helicobacter pylori G27 typeII adenine methyltransferase YP_002265721.1 97456 D 563041 CDS YP_002265722.1 208434056 6962971 complement(99308..99838) 1 NC_011333.1 hypothetical protein 99838 6962971 HPG27_87 Helicobacter pylori G27 hypothetical protein YP_002265722.1 99308 R 563041 CDS YP_002265723.1 208434057 6962972 99911..100855 1 NC_011333.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 100855 6962972 HPG27_88 Helicobacter pylori G27 2-hydroxyacid dehydrogenase YP_002265723.1 99911 D 563041 CDS YP_002265724.1 208434058 6962973 complement(101070..101798) 1 NC_011333.1 hypothetical protein 101798 6962973 HPG27_89 Helicobacter pylori G27 hypothetical protein YP_002265724.1 101070 R 563041 CDS YP_002265725.1 208434059 6962974 complement(101890..103344) 1 NC_011333.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 103344 thrC 6962974 thrC Helicobacter pylori G27 threonine synthase YP_002265725.1 101890 R 563041 CDS YP_002265726.1 208434060 6962975 103546..105573 1 NC_011333.1 methyl-accepting chemotaxis transmembrane sensory protein 105573 tlpA 6962975 tlpA Helicobacter pylori G27 methyl-accepting chemotaxis transmembrane sensory protein YP_002265726.1 103546 D 563041 CDS YP_002265727.1 208434061 6962976 105573..106679 1 NC_011333.1 hypothetical protein 106679 6962976 HPG27_92 Helicobacter pylori G27 hypothetical protein YP_002265727.1 105573 D 563041 CDS YP_002265728.1 208434062 6962977 106895..107656 1 NC_011333.1 hypothetical protein 107656 6962977 HPG27_93 Helicobacter pylori G27 hypothetical protein YP_002265728.1 106895 D 563041 CDS YP_002265729.1 208434063 6962978 complement(107639..108421) 1 NC_011333.1 glycosyltransferase 108421 6962978 HPG27_94 Helicobacter pylori G27 glycosyltransferase YP_002265729.1 107639 R 563041 CDS YP_002265730.1 208434064 6962979 complement(108452..110149) 1 NC_011333.1 methyl-accepting chemotaxis protein 110149 tlpB 6962979 tlpB Helicobacter pylori G27 methyl-accepting chemotaxis protein YP_002265730.1 108452 R 563041 CDS YP_002265731.1 208434065 6962980 complement(110357..112102) 1 NC_011333.1 2',3'-cyclic-nucleotide 2'-phosphodiesterase 112102 cpdB 6962980 cpdB Helicobacter pylori G27 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_002265731.1 110357 R 563041 CDS YP_002265732.1 208434066 6962981 complement(112243..112710) 1 NC_011333.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 112710 luxS 6962981 luxS Helicobacter pylori G27 S-ribosylhomocysteinase YP_002265732.1 112243 R 563041 CDS YP_002265733.1 208434067 6962982 complement(112740..113882) 1 NC_011333.1 catalyzes the formation of L-cystathionine from O-succinyl-L-homoserine and L-cysteine; or Cystathionine beta-lyase (CBL) can convert cystathionine to homocysteine; cystathionine gamma-synthase/cystathionine beta-lyase 113882 6962982 HPG27_98 Helicobacter pylori G27 cystathionine gamma-synthase/cystathionine beta-lyase YP_002265733.1 112740 R 563041 CDS YP_002265734.1 208434068 6962983 complement(113903..114820) 1 NC_011333.1 cysteine synthetase 114820 cysK 6962983 cysK Helicobacter pylori G27 cysteine synthetase YP_002265734.1 113903 R 563041 CDS YP_002265735.1 208434069 6962984 complement(115061..115345) 1 NC_011333.1 hypothetical protein 115345 6962984 HPG27_100 Helicobacter pylori G27 hypothetical protein YP_002265735.1 115061 R 563041 CDS YP_002265736.1 208434070 6962985 complement(115576..117438) 1 NC_011333.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 117438 dnaK 6962985 dnaK Helicobacter pylori G27 molecular chaperone DnaK YP_002265736.1 115576 R 563041 CDS YP_002265737.1 208434071 6962986 complement(117469..118044) 1 NC_011333.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 118044 grpE 6962986 grpE Helicobacter pylori G27 heat shock protein GrpE YP_002265737.1 117469 R 563041 CDS YP_002265738.1 208434072 6962987 complement(118044..118874) 1 NC_011333.1 Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor 118874 6962987 HPG27_103 Helicobacter pylori G27 heat-inducible transcription repressor YP_002265738.1 118044 R 563041 CDS YP_002265739.1 208434073 6962988 119330..119893 1 NC_011333.1 hypothetical protein 119893 6962988 HPG27_104 Helicobacter pylori G27 hypothetical protein YP_002265739.1 119330 D 563041 CDS YP_002265740.1 208434074 6962989 119914..120210 1 NC_011333.1 hypothetical protein 120210 6962989 HPG27_105 Helicobacter pylori G27 hypothetical protein YP_002265740.1 119914 D 563041 CDS YP_002265741.1 208434075 6962990 complement(120220..122103) 1 NC_011333.1 hypothetical protein 122103 6962990 HPG27_106 Helicobacter pylori G27 hypothetical protein YP_002265741.1 120220 R 563041 CDS YP_002265742.1 208434076 6962991 complement(122164..123708) 1 NC_011333.1 FlaB; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin B 123708 flaB 6962991 flaB Helicobacter pylori G27 flagellin B YP_002265742.1 122164 R 563041 CDS YP_002265743.1 208434077 6962992 123873..126083 1 NC_011333.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 126083 topA 6962992 topA Helicobacter pylori G27 DNA topoisomerase I YP_002265743.1 123873 D 563041 CDS YP_002265744.1 208434078 6962993 126145..127002 1 NC_011333.1 hypothetical protein 127002 6962993 HPG27_109 Helicobacter pylori G27 hypothetical protein YP_002265744.1 126145 D 563041 CDS YP_002265745.1 208434079 6962994 complement(127142..128326) 1 NC_011333.1 hypothetical protein 128326 6962994 HPG27_110 Helicobacter pylori G27 hypothetical protein YP_002265745.1 127142 R 563041 CDS YP_002265746.1 208434080 6962995 complement(128482..130920) 1 NC_011333.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 130920 6962995 HPG27_111 Helicobacter pylori G27 phosphoenolpyruvate synthase YP_002265746.1 128482 R 563041 CDS YP_002265747.1 208434081 6962996 131279..133117 1 NC_011333.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 133117 thrS 6962996 thrS Helicobacter pylori G27 threonyl-tRNA synthetase YP_002265747.1 131279 D 563041 CDS YP_002265748.1 208434082 6962997 133114..133725 1 NC_011333.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 133725 infC 6962997 infC Helicobacter pylori G27 translation initiation factor IF-3 YP_002265748.1 133114 D 563041 CDS YP_002265749.1 208434083 6962998 133706..133900 1 NC_011333.1 50S ribosomal protein L35 133900 rpmI 6962998 rpmI Helicobacter pylori G27 50S ribosomal protein L35 YP_002265749.1 133706 D 563041 CDS YP_002265750.1 208434084 6962999 133995..134345 1 NC_011333.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 134345 rplT 6962999 rplT Helicobacter pylori G27 50S ribosomal protein L20 YP_002265750.1 133995 D 563041 CDS YP_002265751.1 208434085 6963000 134546..135406 1 NC_011333.1 outer membrane protein 135406 horB 6963000 horB Helicobacter pylori G27 outer membrane protein YP_002265751.1 134546 D 563041 CDS YP_002265752.1 208434086 6963001 135754..136185 1 NC_011333.1 hypothetical protein 136185 6963001 HPG27_117 Helicobacter pylori G27 hypothetical protein YP_002265752.1 135754 D 563041 CDS YP_002265753.1 208434087 6963002 136332..136499 1 NC_011333.1 hypothetical protein 136499 6963002 HPG27_118 Helicobacter pylori G27 hypothetical protein YP_002265753.1 136332 D 563041 CDS YP_002265754.1 208434088 6963003 136595..137455 1 NC_011333.1 hypothetical protein 137455 6963003 HPG27_119 Helicobacter pylori G27 hypothetical protein YP_002265754.1 136595 D 563041 CDS YP_002265755.1 208434089 6963004 complement(138106..139473) 1 NC_011333.1 L-serine deaminase 139473 sdaA 6963004 sdaA Helicobacter pylori G27 L-serine deaminase YP_002265755.1 138106 R 563041 CDS YP_002265756.1 208434090 6963005 complement(139473..140714) 1 NC_011333.1 L-serine transporter 140714 sdaC 6963005 sdaC Helicobacter pylori G27 L-serine transporter YP_002265756.1 139473 R 563041 CDS YP_002265757.1 208434091 6963006 140895..142244 1 NC_011333.1 tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase 142244 6963006 HPG27_122 Helicobacter pylori G27 tyrosine-regulated 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase YP_002265757.1 140895 D 563041 CDS YP_002265758.1 208434092 6963007 complement(142895..143353) 1 NC_011333.1 bacterioferritin comigratory protein 143353 6963007 HPG27_123 Helicobacter pylori G27 bacterioferritin comigratory protein YP_002265758.1 142895 R 563041 CDS YP_002265759.1 208434093 6963008 complement(143363..143905) 1 NC_011333.1 hypothetical protein 143905 6963008 HPG27_124 Helicobacter pylori G27 hypothetical protein YP_002265759.1 143363 R 563041 CDS YP_002265760.1 208434094 6963009 complement(143991..145436) 1 NC_011333.1 iron-sulfur protein 145436 6963009 HPG27_125 Helicobacter pylori G27 iron-sulfur protein YP_002265760.1 143991 R 563041 CDS YP_002265761.1 208434095 6963010 complement(145466..146194) 1 NC_011333.1 hypothetical protein 146194 6963010 HPG27_126 Helicobacter pylori G27 hypothetical protein YP_002265761.1 145466 R 563041 CDS YP_002265762.1 208434096 6963011 146425..148074 1 NC_011333.1 L-lactate permease 148074 6963011 HPG27_127 Helicobacter pylori G27 L-lactate permease YP_002265762.1 146425 D 563041 CDS YP_002265763.1 208434097 6963012 148123..149778 1 NC_011333.1 L-lactate permease 149778 6963012 HPG27_128 Helicobacter pylori G27 L-lactate permease YP_002265763.1 148123 D 563041 CDS YP_002265764.1 208434098 6963013 complement(149802..150674) 1 NC_011333.1 DNA glycosylase MutY 150674 mutY 6963013 mutY Helicobacter pylori G27 DNA glycosylase MutY YP_002265764.1 149802 R 563041 CDS YP_002265765.1 208434099 6963014 complement(150789..152237) 1 NC_011333.1 C(4)-dicarboxylates and tricarboxylates/succinate antiporter 152237 6963014 HPG27_130 Helicobacter pylori G27 C(4)-dicarboxylates and tricarboxylates/succinate antiporter YP_002265765.1 150789 R 563041 CDS YP_002265766.1 208434100 6963015 152407..153873 1 NC_011333.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 153873 6963015 HPG27_131 Helicobacter pylori G27 cbb3-type cytochrome c oxidase subunit I YP_002265766.1 152407 D 563041 CDS YP_002265767.1 208434101 6963016 153886..154584 1 NC_011333.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 154584 6963016 HPG27_132 Helicobacter pylori G27 cbb3-type cytochrome c oxidase subunit II YP_002265767.1 153886 D 563041 CDS YP_002265768.1 208434102 6963017 154595..154813 1 NC_011333.1 cytochrome coxidase subunit Q 154813 6963017 HPG27_133 Helicobacter pylori G27 cytochrome coxidase subunit Q YP_002265768.1 154595 D 563041 CDS YP_002265769.1 208434103 6963018 154815..155693 1 NC_011333.1 cytochrome coxidase diheme subunit 155693 6963018 HPG27_134 Helicobacter pylori G27 cytochrome coxidase diheme subunit YP_002265769.1 154815 D 563041 CDS YP_002265770.1 208434104 6963019 155704..155910 1 NC_011333.1 hypothetical protein 155910 6963019 HPG27_135 Helicobacter pylori G27 hypothetical protein YP_002265770.1 155704 D 563041 CDS YP_002265771.1 208434105 6963020 156011..156604 1 NC_011333.1 hypothetical protein 156604 6963020 HPG27_136 Helicobacter pylori G27 hypothetical protein YP_002265771.1 156011 D 563041 CDS YP_002265772.1 208434106 6963022 157286..158053 1 NC_011333.1 hypothetical protein 158053 6963022 HPG27_138 Helicobacter pylori G27 hypothetical protein YP_002265772.1 157286 D 563041 CDS YP_002265773.1 208434107 6963023 complement(158050..158913) 1 NC_011333.1 hypothetical protein 158913 6963023 HPG27_139 Helicobacter pylori G27 hypothetical protein YP_002265773.1 158050 R 563041 CDS YP_002265774.1 208434108 6963024 159012..160055 1 NC_011333.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 160055 recA 6963024 recA Helicobacter pylori G27 recombinase A YP_002265774.1 159012 D 563041 CDS YP_002265775.1 208434109 6963025 160067..161347 1 NC_011333.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 161347 eno 6963025 eno Helicobacter pylori G27 phosphopyruvate hydratase YP_002265775.1 160067 D 563041 CDS YP_002265776.1 208434110 6963026 161466..161615 1 NC_011333.1 hypothetical protein 161615 6963026 HPG27_142 Helicobacter pylori G27 hypothetical protein YP_002265776.1 161466 D 563041 CDS YP_002265777.1 208434111 6963027 161632..162228 1 NC_011333.1 hypothetical protein 162228 6963027 HPG27_143 Helicobacter pylori G27 hypothetical protein YP_002265777.1 161632 D 563041 CDS YP_002265778.1 208434112 6963028 162233..162721 1 NC_011333.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 162721 aroK 6963028 aroK Helicobacter pylori G27 shikimate kinase YP_002265778.1 162233 D 563041 CDS YP_002265779.1 208434113 6963029 162742..163698 1 NC_011333.1 hypothetical protein 163698 6963029 HPG27_145 Helicobacter pylori G27 hypothetical protein YP_002265779.1 162742 D 563041 CDS YP_002265780.1 208434114 6963030 complement(163695..164798) 1 NC_011333.1 lipopolysaccharide1,2-glycosyltransferase 164798 rfaJ-1 6963030 rfaJ-1 Helicobacter pylori G27 lipopolysaccharide1,2-glycosyltransferase YP_002265780.1 163695 R 563041 CDS YP_002265781.1 208434115 6963031 164950..165870 1 NC_011333.1 cysteine-rich protein D 165870 6963031 HPG27_147 Helicobacter pylori G27 cysteine-rich protein D YP_002265781.1 164950 D 563041 CDS YP_002265782.1 208434116 6963032 complement(166658..167380) 1 NC_011333.1 hypothetical protein 167380 6963032 HPG27_148 Helicobacter pylori G27 hypothetical protein YP_002265782.1 166658 R 563041 CDS YP_002265783.1 208434117 6963033 complement(167381..168352) 1 NC_011333.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 168352 6963033 HPG27_149 Helicobacter pylori G27 delta-aminolevulinic acid dehydratase YP_002265783.1 167381 R 563041 CDS YP_002265784.1 208434118 6963034 complement(168362..169708) 1 NC_011333.1 putative histidine kinase sensor protein 169708 6963034 HPG27_150 Helicobacter pylori G27 putative histidine kinase sensor protein YP_002265784.1 168362 R 563041 CDS YP_002265785.1 208434119 6963035 complement(169732..170409) 1 NC_011333.1 response regulator 170409 6963035 HPG27_151 Helicobacter pylori G27 response regulator YP_002265785.1 169732 R 563041 CDS YP_002265786.1 208434120 6963036 complement(170644..171072) 1 NC_011333.1 hypothetical protein 171072 6963036 HPG27_152 Helicobacter pylori G27 hypothetical protein YP_002265786.1 170644 R 563041 CDS YP_002265787.1 208434121 6963037 complement(171111..171374) 1 NC_011333.1 hypothetical protein 171374 6963037 HPG27_153 Helicobacter pylori G27 hypothetical protein YP_002265787.1 171111 R 563041 CDS YP_002265788.1 208434122 6963038 complement(171408..172688) 1 NC_011333.1 collagenase 172688 6963038 HPG27_154 Helicobacter pylori G27 collagenase YP_002265788.1 171408 R 563041 CDS YP_002265789.1 208434123 6963039 complement(172691..173422) 1 NC_011333.1 hypothetical protein 173422 6963039 HPG27_155 Helicobacter pylori G27 hypothetical protein YP_002265789.1 172691 R 563041 CDS YP_002265790.1 208434124 6963040 complement(173493..174584) 1 NC_011333.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 174584 prfB 6963040 prfB Helicobacter pylori G27 peptide chain release factor 2 YP_002265790.1 173493 R 563041 CDS YP_002265791.1 208434125 6963041 complement(174645..175820) 1 NC_011333.1 molybdopterin biosynthesis protein 175820 6963041 HPG27_157 Helicobacter pylori G27 molybdopterin biosynthesis protein YP_002265791.1 174645 R 563041 CDS YP_002265792.1 208434126 6963042 complement(175830..176597) 1 NC_011333.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 176597 fliR 6963042 fliR Helicobacter pylori G27 flagellar biosynthesis protein FliR YP_002265792.1 175830 R 563041 CDS YP_002265793.1 208434127 6963043 complement(176591..177319) 1 NC_011333.1 hypothetical protein 177319 6963043 HPG27_159 Helicobacter pylori G27 hypothetical protein YP_002265793.1 176591 R 563041 CDS YP_002265794.1 208434128 6963044 177806..178705 1 NC_011333.1 peptidyl-prolylcis-transisomerase C 178705 6963044 HPG27_160 Helicobacter pylori G27 peptidyl-prolylcis-transisomerase C YP_002265794.1 177806 D 563041 CDS YP_002265795.1 208434129 6963045 178723..179646 1 NC_011333.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 179646 6963045 HPG27_161 Helicobacter pylori G27 fructose-bisphosphate aldolase YP_002265795.1 178723 D 563041 CDS YP_002265796.1 208434130 6963046 179668..180231 1 NC_011333.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 180231 6963046 HPG27_162 Helicobacter pylori G27 elongation factor P YP_002265796.1 179668 D 563041 CDS YP_002265797.1 208434131 6963047 complement(180871..181893) 1 NC_011333.1 sialic acid synthase 181893 6963047 HPG27_163 Helicobacter pylori G27 sialic acid synthase YP_002265797.1 180871 R 563041 CDS YP_002265798.1 208434132 6963048 complement(181896..182537) 1 NC_011333.1 ABC transporter 182537 6963048 HPG27_164 Helicobacter pylori G27 ABC transporter YP_002265798.1 181896 R 563041 CDS YP_002265799.1 208434133 6963049 complement(182534..183811) 1 NC_011333.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 183811 6963049 HPG27_165 Helicobacter pylori G27 apolipoprotein N-acyltransferase YP_002265799.1 182534 R 563041 CDS YP_002265800.1 208434134 6963050 183880..184044 1 NC_011333.1 hypothetical protein 184044 6963050 HPG27_166 Helicobacter pylori G27 hypothetical protein YP_002265800.1 183880 D 563041 CDS YP_002265801.1 208434135 6963051 184048..184749 1 NC_011333.1 hypothetical protein 184749 6963051 HPG27_167 Helicobacter pylori G27 hypothetical protein YP_002265801.1 184048 D 563041 CDS YP_002265802.1 208434136 6963052 184759..186264 1 NC_011333.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 186264 lysS 6963052 lysS Helicobacter pylori G27 lysyl-tRNA synthetase YP_002265802.1 184759 D 563041 CDS YP_002265803.1 208434137 6963053 186264..187514 1 NC_011333.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 187514 glyA 6963053 glyA Helicobacter pylori G27 serine hydroxymethyltransferase YP_002265803.1 186264 D 563041 CDS YP_002265804.1 208434138 6963054 187525..188067 1 NC_011333.1 hypothetical protein 188067 6963054 HPG27_170 Helicobacter pylori G27 hypothetical protein YP_002265804.1 187525 D 563041 CDS YP_002265805.1 208434139 6963055 188090..188899 1 NC_011333.1 hypothetical protein 188899 6963055 HPG27_171 Helicobacter pylori G27 hypothetical protein YP_002265805.1 188090 D 563041 CDS YP_002265806.1 208434140 6963057 191141..191674 1 NC_011333.1 hypothetical protein 191674 6963057 HPG27_173 Helicobacter pylori G27 hypothetical protein YP_002265806.1 191141 D 563041 CDS YP_002265807.1 208434141 6963058 complement(191680..193188) 1 NC_011333.1 phospholipase D-family protein 193188 6963058 HPG27_174 Helicobacter pylori G27 phospholipase D-family protein YP_002265807.1 191680 R 563041 CDS YP_002265808.1 208434142 6963059 complement(193210..193914) 1 NC_011333.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 193914 frdB 6963059 frdB Helicobacter pylori G27 fumarate reductase iron-sulfur subunit YP_002265808.1 193210 R 563041 CDS YP_002265809.1 208434143 6963060 complement(193940..196084) 1 NC_011333.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 196084 frdA 6963060 frdA Helicobacter pylori G27 fumarate reductase flavoprotein subunit YP_002265809.1 193940 R 563041 CDS YP_002265810.1 208434144 6963061 complement(196094..196861) 1 NC_011333.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 196861 frdC 6963061 frdC Helicobacter pylori G27 fumarate reductase cytochrome b-556 subunit YP_002265810.1 196094 R 563041 CDS YP_002265811.1 208434145 6963062 197079..197783 1 NC_011333.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 197783 tpiA 6963062 tpiA Helicobacter pylori G27 triosephosphate isomerase YP_002265811.1 197079 D 563041 CDS YP_002265812.1 208434146 6963063 197793..198620 1 NC_011333.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-(acyl carrier protein) reductase 198620 6963063 HPG27_179 Helicobacter pylori G27 enoyl-(acyl carrier protein) reductase YP_002265812.1 197793 D 563041 CDS YP_002265813.1 208434147 6963064 198630..199640 1 NC_011333.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 199640 lpxD 6963064 lpxD Helicobacter pylori G27 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_002265813.1 198630 D 563041 CDS YP_002265814.1 208434148 6963065 199705..200862 1 NC_011333.1 catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 200862 6963065 HPG27_181 Helicobacter pylori G27 S-adenosylmethionine synthetase YP_002265814.1 199705 D 563041 CDS YP_002265815.1 208434149 6963066 200929..201342 1 NC_011333.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; nucleoside diphosphate kinase 201342 ndk 6963066 ndk Helicobacter pylori G27 nucleoside diphosphate kinase YP_002265815.1 200929 D 563041 CDS YP_002265816.1 208434150 6963067 201367..201723 1 NC_011333.1 hypothetical protein 201723 6963067 HPG27_183 Helicobacter pylori G27 hypothetical protein YP_002265816.1 201367 D 563041 CDS YP_002265817.1 208434151 6963068 201963..202982 1 NC_011333.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; putative glycerol-3-phosphate acyltransferase PlsX 202982 6963068 HPG27_184 Helicobacter pylori G27 putative glycerol-3-phosphate acyltransferase PlsX YP_002265817.1 201963 D 563041 CDS YP_002265818.1 208434152 6963069 203007..203999 1 NC_011333.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-(acyl carrier protein) synthase III 203999 6963069 HPG27_185 Helicobacter pylori G27 3-oxoacyl-(acyl carrier protein) synthase III YP_002265818.1 203007 D 563041 CDS YP_002265819.1 208434153 6963070 204127..204321 1 NC_011333.1 hypothetical protein 204321 6963070 HPG27_186 Helicobacter pylori G27 hypothetical protein YP_002265819.1 204127 D 563041 CDS YP_002265820.1 208434154 6963071 complement(204785..205168) 1 NC_011333.1 hypothetical protein 205168 6963071 HPG27_187 Helicobacter pylori G27 hypothetical protein YP_002265820.1 204785 R 563041 CDS YP_002265821.1 208434155 6963072 complement(205242..208370) 1 NC_011333.1 hypothetical protein 208370 6963072 HPG27_188 Helicobacter pylori G27 hypothetical protein YP_002265821.1 205242 R 563041 CDS YP_002265822.1 208434156 6963073 208467..209573 1 NC_011333.1 ATP-binding protein 209573 6963073 HPG27_189 Helicobacter pylori G27 ATP-binding protein YP_002265822.1 208467 D 563041 CDS YP_002265823.1 208434157 6963074 complement(209588..210610) 1 NC_011333.1 lipopolysaccharide 1,2-glycosyltransferase 210610 rfaJ-2 6963074 rfaJ-2 Helicobacter pylori G27 lipopolysaccharide 1,2-glycosyltransferase YP_002265823.1 209588 R 563041 CDS YP_002265824.1 208434158 6963075 210843..212267 1 NC_011333.1 outer membrane protein 212267 hofA 6963075 hofA Helicobacter pylori G27 outer membrane protein YP_002265824.1 210843 D 563041 CDS YP_002265825.1 208434159 6963076 212370..214235 1 NC_011333.1 molecular chaperone; heat shock protein 90 214235 6963076 HPG27_192 Helicobacter pylori G27 heat shock protein 90 YP_002265825.1 212370 D 563041 CDS YP_002265826.1 208434160 6963077 complement(214433..215185) 1 NC_011333.1 cysteine-rich protein A 215185 6963077 HPG27_193 Helicobacter pylori G27 cysteine-rich protein A YP_002265826.1 214433 R 563041 CDS YP_002265827.1 208434161 6963078 complement(215266..216432) 1 NC_011333.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 216432 6963078 HPG27_194 Helicobacter pylori G27 succinyl-diaminopimelate desuccinylase YP_002265827.1 215266 R 563041 CDS YP_002265828.1 208434162 6963079 complement(216443..218308) 1 NC_011333.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 218308 6963079 HPG27_195 Helicobacter pylori G27 tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_002265828.1 216443 R 563041 CDS YP_002265829.1 208434163 6963080 218404..220062 1 NC_011333.1 sodium-dependent transporter 220062 6963080 HPG27_196 Helicobacter pylori G27 sodium-dependent transporter YP_002265829.1 218404 D 563041 CDS YP_002265830.1 208434164 6963081 220075..220875 1 NC_011333.1 CDP-diacylglycerol synthetase 220875 6963081 HPG27_197 Helicobacter pylori G27 CDP-diacylglycerol synthetase YP_002265830.1 220075 D 563041 CDS YP_002265831.1 208434165 6963082 220876..221976 1 NC_011333.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 221976 6963082 HPG27_198 Helicobacter pylori G27 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_002265831.1 220876 D 563041 CDS YP_002265832.1 208434166 6963083 complement(222157..222708) 1 NC_011333.1 phospholipid-binding protein 222708 6963083 HPG27_199 Helicobacter pylori G27 phospholipid-binding protein YP_002265832.1 222157 R 563041 CDS YP_002265833.1 208434167 6963084 222854..223315 1 NC_011333.1 hypothetical protein 223315 6963084 HPG27_200 Helicobacter pylori G27 hypothetical protein YP_002265833.1 222854 D 563041 CDS YP_002265834.1 208434168 6963085 223328..224650 1 NC_011333.1 cysteine desulfurase 224650 6963085 HPG27_201 Helicobacter pylori G27 cysteine desulfurase YP_002265834.1 223328 D 563041 CDS YP_002265835.1 208434169 6963086 224672..225652 1 NC_011333.1 nifU-like protein 225652 6963086 HPG27_202 Helicobacter pylori G27 nifU-like protein YP_002265835.1 224672 D 563041 CDS YP_002265836.1 208434170 6963087 225808..226041 1 NC_011333.1 hypothetical protein 226041 6963087 HPG27_203 Helicobacter pylori G27 hypothetical protein YP_002265836.1 225808 D 563041 CDS YP_002265837.1 208434171 6963088 226154..227500 1 NC_011333.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 227500 6963088 HPG27_204 Helicobacter pylori G27 DNA repair protein RadA YP_002265837.1 226154 D 563041 CDS YP_002265838.1 208434172 6963089 227624..228703 1 NC_011333.1 bifunctional methioninesulfoxide reductaseA/B protein 228703 6963089 HPG27_205 Helicobacter pylori G27 bifunctional methioninesulfoxide reductaseA/B protein YP_002265838.1 227624 D 563041 CDS YP_002265839.1 208434173 6963090 complement(229070..229903) 1 NC_011333.1 hypothetical protein 229903 6963090 HPG27_206 Helicobacter pylori G27 hypothetical protein YP_002265839.1 229070 R 563041 CDS YP_002265840.1 208434174 6963091 complement(230115..232196) 1 NC_011333.1 outer membrane protein 232196 6963091 HPG27_207 Helicobacter pylori G27 outer membrane protein YP_002265840.1 230115 R 563041 CDS YP_002265841.1 208434175 6963092 232431..233588 1 NC_011333.1 putative sulfate permease 233588 6963092 HPG27_208 Helicobacter pylori G27 putative sulfate permease YP_002265841.1 232431 D 563041 CDS YP_002265842.1 208434176 6963094 complement(233816..235276) 1 NC_011333.1 outer membrane protein 235276 hopA 6963094 hopA Helicobacter pylori G27 outer membrane protein YP_002265842.1 233816 R 563041 CDS YP_002265843.1 208434177 6963095 complement(235470..236201) 1 NC_011333.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 236201 6963095 HPG27_210 Helicobacter pylori G27 3-deoxy-manno-octulosonate cytidylyltransferase YP_002265843.1 235470 R 563041 CDS YP_002265844.1 208434178 6963096 236309..237106 1 NC_011333.1 disulfide isomerase 237106 6963096 HPG27_211 Helicobacter pylori G27 disulfide isomerase YP_002265844.1 236309 D 563041 CDS YP_002265845.1 208434179 6963097 237122..237772 1 NC_011333.1 hypothetical protein 237772 6963097 HPG27_212 Helicobacter pylori G27 hypothetical protein YP_002265845.1 237122 D 563041 CDS YP_002265846.1 208434180 6963098 237796..238968 1 NC_011333.1 glutathione spermidine synthetase 238968 6963098 HPG27_213 Helicobacter pylori G27 glutathione spermidine synthetase YP_002265846.1 237796 D 563041 CDS YP_002265847.1 208434181 6963099 238968..239498 1 NC_011333.1 hypothetical protein 239498 6963099 HPG27_214 Helicobacter pylori G27 hypothetical protein YP_002265847.1 238968 D 563041 CDS YP_002265848.1 208434182 6963100 complement(240264..241331) 1 NC_011333.1 cysteine-rich protein E 241331 6963100 HPG27_215 Helicobacter pylori G27 cysteine-rich protein E YP_002265848.1 240264 R 563041 CDS YP_002265849.1 208434183 6963101 complement(241424..241795) 1 NC_011333.1 hypothetical protein 241795 6963101 HPG27_216 Helicobacter pylori G27 hypothetical protein YP_002265849.1 241424 R 563041 CDS YP_002265850.1 208434184 6963102 complement(241795..242715) 1 NC_011333.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 242715 hemC 6963102 hemC Helicobacter pylori G27 porphobilinogen deaminase YP_002265850.1 241795 R 563041 CDS YP_002265851.1 208434185 6963103 complement(242726..244459) 1 NC_011333.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 244459 6963103 HPG27_218 Helicobacter pylori G27 prolyl-tRNA synthetase YP_002265851.1 242726 R 563041 CDS YP_002265852.1 208434186 6963104 complement(244463..245812) 1 NC_011333.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 245812 hemA 6963104 hemA Helicobacter pylori G27 glutamyl-tRNA reductase YP_002265852.1 244463 R 563041 CDS YP_002265853.1 208434187 6963105 complement(245812..246735) 1 NC_011333.1 putative octaprenyl-diphosphate synthase 246735 6963105 HPG27_220 Helicobacter pylori G27 putative octaprenyl-diphosphate synthase YP_002265853.1 245812 R 563041 CDS YP_002265854.1 208434188 6963106 complement(246745..247116) 1 NC_011333.1 hypothetical protein 247116 6963106 HPG27_221 Helicobacter pylori G27 hypothetical protein YP_002265854.1 246745 R 563041 CDS YP_002265855.1 208434189 6963107 complement(247133..247417) 1 NC_011333.1 hypothetical protein 247417 6963107 HPG27_222 Helicobacter pylori G27 hypothetical protein YP_002265855.1 247133 R 563041 CDS YP_002265856.1 208434190 6963108 complement(247438..247872) 1 NC_011333.1 neutrophil activating protein 247872 6963108 HPG27_223 Helicobacter pylori G27 neutrophil activating protein YP_002265856.1 247438 R 563041 CDS YP_002265857.1 208434191 6963109 complement(248079..249224) 1 NC_011333.1 histidine kinase sensor protein 249224 6963109 HPG27_224 Helicobacter pylori G27 histidine kinase sensor protein YP_002265857.1 248079 R 563041 CDS YP_002265858.1 208434192 6963110 complement(249221..249538) 1 NC_011333.1 hypothetical protein 249538 6963110 HPG27_225 Helicobacter pylori G27 hypothetical protein YP_002265858.1 249221 R 563041 CDS YP_002265859.1 208434193 6963111 complement(249535..250563) 1 NC_011333.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring protein 250563 flgI 6963111 flgI Helicobacter pylori G27 flagellar basal body P-ring protein YP_002265859.1 249535 R 563041 CDS YP_002265860.1 208434194 6963112 250762..252240 1 NC_011333.1 ATP-dependent RNA helicase 252240 6963112 HPG27_227 Helicobacter pylori G27 ATP-dependent RNA helicase YP_002265860.1 250762 D 563041 CDS YP_002265861.1 208434195 6963113 252261..253349 1 NC_011333.1 hypothetical protein 253349 6963113 HPG27_228 Helicobacter pylori G27 hypothetical protein YP_002265861.1 252261 D 563041 CDS YP_002265862.1 208434196 6963114 253356..253895 1 NC_011333.1 hypothetical protein 253895 6963114 HPG27_229 Helicobacter pylori G27 hypothetical protein YP_002265862.1 253356 D 563041 CDS YP_002265863.1 208434197 6963115 complement(253978..255528) 1 NC_011333.1 oligopeptide permease ATPase 255528 6963115 HPG27_230 Helicobacter pylori G27 oligopeptide permease ATPase YP_002265863.1 253978 R 563041 CDS YP_002265864.1 208434198 6963116 complement(255538..256560) 1 NC_011333.1 oligopeptide permease integral membrane protein 256560 6963116 HPG27_231 Helicobacter pylori G27 oligopeptide permease integral membrane protein YP_002265864.1 255538 R 563041 CDS YP_002265865.1 208434199 6963118 256896..258326 1 NC_011333.1 outer membrane protein 258326 hopF 6963118 hopF Helicobacter pylori G27 outer membrane protein YP_002265865.1 256896 D 563041 CDS YP_002265866.1 208434200 6963119 258339..259751 1 NC_011333.1 outer membrane protein 259751 hopG-1 6963119 hopG-1 Helicobacter pylori G27 outer membrane protein YP_002265866.1 258339 D 563041 CDS YP_002265867.1 208434201 6963120 259850..261085 1 NC_011333.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 261085 6963120 HPG27_234 Helicobacter pylori G27 adenylosuccinate synthetase YP_002265867.1 259850 D 563041 CDS YP_002265868.1 208434202 6963121 261082..261510 1 NC_011333.1 hypothetical protein 261510 6963121 HPG27_235 Helicobacter pylori G27 hypothetical protein YP_002265868.1 261082 D 563041 CDS YP_002265869.1 208434203 6963122 261521..262159 1 NC_011333.1 hypothetical protein 262159 6963122 HPG27_236 Helicobacter pylori G27 hypothetical protein YP_002265869.1 261521 D 563041 CDS YP_002265870.1 208434204 6963123 262159..263211 1 NC_011333.1 hypothetical protein 263211 6963123 HPG27_237 Helicobacter pylori G27 hypothetical protein YP_002265870.1 262159 D 563041 CDS YP_002265871.1 208434205 6963124 263224..264486 1 NC_011333.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 264486 xseA 6963124 xseA Helicobacter pylori G27 exodeoxyribonuclease VII large subunit YP_002265871.1 263224 D 563041 CDS YP_002265872.1 208434206 6963125 complement(264505..265659) 1 NC_011333.1 type III adenine methyltransferase 265659 6963125 HPG27_239 Helicobacter pylori G27 type III adenine methyltransferase YP_002265872.1 264505 R 563041 CDS YP_002265873.1 208434207 6963126 complement(265670..266284) 1 NC_011333.1 hypothetical protein 266284 6963126 HPG27_240 Helicobacter pylori G27 hypothetical protein YP_002265873.1 265670 R 563041 CDS YP_002265874.1 208434208 6963127 266397..267134 1 NC_011333.1 type II DNA modification enzyme 267134 6963127 HPG27_241 Helicobacter pylori G27 type II DNA modification enzyme YP_002265874.1 266397 D 563041 CDS YP_002265875.1 208434209 6963128 267131..267916 1 NC_011333.1 typeII DNA modification enzyme 267916 6963128 HPG27_242 Helicobacter pylori G27 typeII DNA modification enzyme YP_002265875.1 267131 D 563041 CDS YP_002265876.1 208434210 6963129 267988..270558 1 NC_011333.1 ATP-dependent protease binding subunit / heatshock protein 270558 clpB 6963129 clpB Helicobacter pylori G27 ATP-dependent protease binding subunit / heatshock protein YP_002265876.1 267988 D 563041 CDS YP_002265877.1 208434211 6963130 270616..271335 1 NC_011333.1 cytochrome c biogenesis protein 271335 6963130 HPG27_244 Helicobacter pylori G27 cytochrome c biogenesis protein YP_002265877.1 270616 D 563041 CDS YP_002265878.1 208434212 6963131 271345..272481 1 NC_011333.1 dihydroorotase 272481 pyrC 6963131 pyrC Helicobacter pylori G27 dihydroorotase YP_002265878.1 271345 D 563041 CDS YP_002265879.1 208434213 6963132 272499..273695 1 NC_011333.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 273695 6963132 HPG27_246 Helicobacter pylori G27 chlorohydrolase YP_002265879.1 272499 D 563041 CDS YP_002265880.1 208434214 6963133 273756..273998 1 NC_011333.1 hypothetical protein 273998 6963133 HPG27_247 Helicobacter pylori G27 hypothetical protein YP_002265880.1 273756 D 563041 CDS YP_002265881.1 208434215 6963134 274008..275321 1 NC_011333.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 275321 6963134 HPG27_248 Helicobacter pylori G27 (dimethylallyl)adenosine tRNA methylthiotransferase YP_002265881.1 274008 D 563041 CDS YP_002265882.1 208434216 6963135 275361..276014 1 NC_011333.1 hypothetical protein 276014 6963135 HPG27_249 Helicobacter pylori G27 hypothetical protein YP_002265882.1 275361 D 563041 CDS YP_002265883.1 208434217 6963136 276055..276987 1 NC_011333.1 hypothetical protein 276987 6963136 HPG27_250 Helicobacter pylori G27 hypothetical protein YP_002265883.1 276055 D 563041 CDS YP_002265884.1 208434218 6963137 277036..277509 1 NC_011333.1 hypothetical protein 277509 6963137 HPG27_251 Helicobacter pylori G27 hypothetical protein YP_002265884.1 277036 D 563041 CDS YP_002265885.1 208434219 6963138 277506..277913 1 NC_011333.1 hypothetical protein 277913 6963138 HPG27_252 Helicobacter pylori G27 hypothetical protein YP_002265885.1 277506 D 563041 CDS YP_002265886.1 208434220 6963139 278060..278458 1 NC_011333.1 hypothetical protein 278458 6963139 HPG27_253 Helicobacter pylori G27 hypothetical protein YP_002265886.1 278060 D 563041 CDS YP_002265887.1 208434221 6963140 278495..279790 1 NC_011333.1 ATP-dependent nuclease 279790 6963140 HPG27_254 Helicobacter pylori G27 ATP-dependent nuclease YP_002265887.1 278495 D 563041 CDS YP_002265888.1 208434222 6963141 279921..280478 1 NC_011333.1 indole-3-glycerol phosphate synthase 280478 6963141 HPG27_255 Helicobacter pylori G27 indole-3-glycerol phosphate synthase YP_002265888.1 279921 D 563041 CDS YP_002265889.1 208434223 6963142 280535..280789 1 NC_011333.1 ferrodoxin 280789 6963142 HPG27_256 Helicobacter pylori G27 ferrodoxin YP_002265889.1 280535 D 563041 CDS YP_002265890.1 208434224 6963143 280799..282253 1 NC_011333.1 guanosine pentaphosphate phosphohydrolase 282253 6963143 HPG27_257 Helicobacter pylori G27 guanosine pentaphosphate phosphohydrolase YP_002265890.1 280799 D 563041 CDS YP_002265891.1 208434225 6963144 282250..283260 1 NC_011333.1 lipopolysaccharide heptosyltransferase-1 283260 6963144 HPG27_258 Helicobacter pylori G27 lipopolysaccharide heptosyltransferase-1 YP_002265891.1 282250 D 563041 CDS YP_002265892.1 208434226 6963145 283257..284243 1 NC_011333.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 284243 6963145 HPG27_259 Helicobacter pylori G27 lipid A biosynthesis lauroyl acyltransferase YP_002265892.1 283257 D 563041 CDS YP_002265893.1 208434227 6963146 complement(284497..285612) 1 NC_011333.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 285612 tgt 6963146 tgt Helicobacter pylori G27 queuine tRNA-ribosyltransferase YP_002265893.1 284497 R 563041 CDS YP_002265894.1 208434228 6963147 285663..287105 1 NC_011333.1 hypothetical protein 287105 6963147 HPG27_261 Helicobacter pylori G27 hypothetical protein YP_002265894.1 285663 D 563041 CDS YP_002265895.1 208434229 6963148 287110..288141 1 NC_011333.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 288141 aroB 6963148 aroB Helicobacter pylori G27 3-dehydroquinate synthase YP_002265895.1 287110 D 563041 CDS YP_002265896.1 208434230 6963149 288147..289703 1 NC_011333.1 hypothetical protein 289703 6963149 HPG27_263 Helicobacter pylori G27 hypothetical protein YP_002265896.1 288147 D 563041 CDS YP_002265897.1 208434231 6963150 289700..290956 1 NC_011333.1 hypothetical protein 290956 6963150 HPG27_264 Helicobacter pylori G27 hypothetical protein YP_002265897.1 289700 D 563041 CDS YP_002265898.1 208434232 6963151 291012..292595 1 NC_011333.1 cell division protein 292595 ftsH-1 6963151 ftsH-1 Helicobacter pylori G27 cell division protein YP_002265898.1 291012 D 563041 CDS YP_002265899.1 208434233 6963152 292598..293116 1 NC_011333.1 hypothetical protein 293116 6963152 HPG27_266 Helicobacter pylori G27 hypothetical protein YP_002265899.1 292598 D 563041 CDS YP_002265900.1 208434234 6963153 293129..293602 1 NC_011333.1 hypothetical protein 293602 6963153 HPG27_267 Helicobacter pylori G27 hypothetical protein YP_002265900.1 293129 D 563041 CDS YP_002265901.1 208434235 6963154 293670..302387 1 NC_011333.1 putative vacuolating cytotoxin(VacA)-like protein 302387 6963154 HPG27_268 Helicobacter pylori G27 putative vacuolating cytotoxin(VacA)-like protein YP_002265901.1 293670 D 563041 CDS YP_002265902.1 208434236 6963155 302435..303652 1 NC_011333.1 diaminopimelate decarboxylase 303652 6963155 HPG27_269 Helicobacter pylori G27 diaminopimelate decarboxylase YP_002265902.1 302435 D 563041 CDS YP_002265903.1 208434237 6963156 303657..303947 1 NC_011333.1 chorismate mutase 303947 6963156 HPG27_270 Helicobacter pylori G27 chorismate mutase YP_002265903.1 303657 D 563041 CDS YP_002265904.1 208434238 6963157 303960..304832 1 NC_011333.1 hypothetical protein 304832 6963157 HPG27_271 Helicobacter pylori G27 hypothetical protein YP_002265904.1 303960 D 563041 CDS YP_002265905.1 208434239 6963158 304833..306512 1 NC_011333.1 para-amino benzoate synthetase 306512 6963158 HPG27_272 Helicobacter pylori G27 para-amino benzoate synthetase YP_002265905.1 304833 D 563041 CDS YP_002265906.1 208434240 6963159 306706..307725 1 NC_011333.1 aliphatic amidase; catalyzes the hydrolysis of short-chain aliphatic amides to their organic acids and can also transfer the acyl moiety of short-chain amides to hydroxylamine to form hydroxamates; acylamide amidohydrolase 307725 amiE 6963159 amiE Helicobacter pylori G27 acylamide amidohydrolase YP_002265906.1 306706 D 563041 CDS YP_002265907.1 208434241 6963160 complement(307808..310294) 1 NC_011333.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 310294 flgL 6963160 flgL Helicobacter pylori G27 flagellar hook-associated protein FlgL YP_002265907.1 307808 R 563041 CDS YP_002265908.1 208434242 6963161 310537..310851 1 NC_011333.1 50S ribosomal protein L21 310851 rplU 6963161 rplU Helicobacter pylori G27 50S ribosomal protein L21 YP_002265908.1 310537 D 563041 CDS YP_002265909.1 208434243 6963162 310866..311132 1 NC_011333.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 311132 rpmA 6963162 rpmA Helicobacter pylori G27 50S ribosomal protein L27 YP_002265909.1 310866 D 563041 CDS YP_002265910.1 208434244 6963163 311249..312898 1 NC_011333.1 periplasmic dipeptide-binding protein 312898 hbpA 6963163 hbpA Helicobacter pylori G27 periplasmic dipeptide-binding protein YP_002265910.1 311249 D 563041 CDS YP_002265911.1 208434245 6963164 312909..313913 1 NC_011333.1 dipeptide permease 313913 dppB 6963164 dppB Helicobacter pylori G27 dipeptide permease YP_002265911.1 312909 D 563041 CDS YP_002265912.1 208434246 6963165 313913..314770 1 NC_011333.1 dipeptide permease 314770 dppC 6963165 dppC Helicobacter pylori G27 dipeptide permease YP_002265912.1 313913 D 563041 CDS YP_002265913.1 208434247 6963166 314782..315645 1 NC_011333.1 dipeptide ABC transporter 315645 appD 6963166 appD Helicobacter pylori G27 dipeptide ABC transporter YP_002265913.1 314782 D 563041 CDS YP_002265914.1 208434248 6963167 315642..316448 1 NC_011333.1 dipeptide ABC transporter 316448 dppF 6963167 dppF Helicobacter pylori G27 dipeptide ABC transporter YP_002265914.1 315642 D 563041 CDS YP_002265915.1 208434249 6963168 316467..317549 1 NC_011333.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 317549 obgE 6963168 obgE Helicobacter pylori G27 GTPase ObgE YP_002265915.1 316467 D 563041 CDS YP_002265916.1 208434250 6963169 317586..318581 1 NC_011333.1 hypothetical protein 318581 6963169 HPG27_283 Helicobacter pylori G27 hypothetical protein YP_002265916.1 317586 D 563041 CDS YP_002265917.1 208434251 6963170 318827..319381 1 NC_011333.1 hypothetical protein 319381 6963170 HPG27_284 Helicobacter pylori G27 hypothetical protein YP_002265917.1 318827 D 563041 CDS YP_002265918.1 208434252 6963171 319391..320683 1 NC_011333.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 320683 6963171 HPG27_285 Helicobacter pylori G27 glutamate-1-semialdehyde aminotransferase YP_002265918.1 319391 D 563041 CDS YP_002265919.1 208434253 6963172 320680..320952 1 NC_011333.1 hypothetical protein 320952 6963172 HPG27_286 Helicobacter pylori G27 hypothetical protein YP_002265919.1 320680 D 563041 CDS YP_002265920.1 208434254 6963173 320968..321372 1 NC_011333.1 hypothetical protein 321372 6963173 HPG27_287 Helicobacter pylori G27 hypothetical protein YP_002265920.1 320968 D 563041 CDS YP_002265921.1 208434255 6963174 321456..322340 1 NC_011333.1 putative N-carbamoyl-D-amino acid amidohydrolase 322340 6963174 HPG27_288 Helicobacter pylori G27 putative N-carbamoyl-D-amino acid amidohydrolase YP_002265921.1 321456 D 563041 CDS YP_002265922.1 208434256 6963175 322353..323234 1 NC_011333.1 hypothetical protein 323234 6963175 HPG27_289 Helicobacter pylori G27 hypothetical protein YP_002265922.1 322353 D 563041 CDS YP_002265923.1 208434257 6963176 complement(323288..323977) 1 NC_011333.1 typeII restriction enzyme 323977 6963176 HPG27_290 Helicobacter pylori G27 typeII restriction enzyme YP_002265923.1 323288 R 563041 CDS YP_002265924.1 208434258 6963178 325188..325556 1 NC_011333.1 hypothetical protein 325556 6963178 HPG27_292 Helicobacter pylori G27 hypothetical protein YP_002265924.1 325188 D 563041 CDS YP_002265925.1 208434259 6963179 325556..326518 1 NC_011333.1 ATP/GTP binding protein 326518 6963179 HPG27_293 Helicobacter pylori G27 ATP/GTP binding protein YP_002265925.1 325556 D 563041 CDS YP_002265926.1 208434260 6963180 complement(326524..327669) 1 NC_011333.1 nitrite extrusion protein 327669 narK 6963180 narK Helicobacter pylori G27 nitrite extrusion protein YP_002265926.1 326524 R 563041 CDS YP_002265927.1 208434261 6963181 complement(327773..327925) 1 NC_011333.1 hypothetical protein 327925 6963181 HPG27_295 Helicobacter pylori G27 hypothetical protein YP_002265927.1 327773 R 563041 CDS YP_002265928.1 208434262 6963182 complement(328012..328260) 1 NC_011333.1 hypothetical protein 328260 6963182 HPG27_296 Helicobacter pylori G27 hypothetical protein YP_002265928.1 328012 R 563041 CDS YP_002265929.1 208434263 6963183 complement(328325..328696) 1 NC_011333.1 hypothetical protein 328696 6963183 HPG27_297 Helicobacter pylori G27 hypothetical protein YP_002265929.1 328325 R 563041 CDS YP_002265930.1 208434264 6963184 complement(329099..331333) 1 NC_011333.1 outer membrane protein 331333 babA 6963184 babA Helicobacter pylori G27 outer membrane protein YP_002265930.1 329099 R 563041 CDS YP_002265931.1 208434265 6963185 complement(331602..332333) 1 NC_011333.1 hypothetical protein 332333 6963185 HPG27_299 Helicobacter pylori G27 hypothetical protein YP_002265931.1 331602 R 563041 CDS YP_002265932.1 208434266 6963186 complement(332418..334043) 1 NC_011333.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 334043 argS 6963186 argS Helicobacter pylori G27 arginyl-tRNA synthetase YP_002265932.1 332418 R 563041 CDS YP_002265933.1 208434267 6963187 334165..334347 1 NC_011333.1 hypothetical protein 334347 6963187 HPG27_301 Helicobacter pylori G27 hypothetical protein YP_002265933.1 334165 D 563041 CDS YP_002265934.1 208434268 6963188 complement(334358..334978) 1 NC_011333.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 334978 gmk 6963188 gmk Helicobacter pylori G27 guanylate kinase YP_002265934.1 334358 R 563041 CDS YP_002265935.1 208434269 6963189 complement(334971..336410) 1 NC_011333.1 polyE-rich protein 336410 6963189 HPG27_303 Helicobacter pylori G27 polyE-rich protein YP_002265935.1 334971 R 563041 CDS YP_002265936.1 208434270 6963190 336554..337096 1 NC_011333.1 membrane-associated cation-independent thermostable nuclease; preferentially cleaves ss-DNA; involved in DNA transformation; nuclease NucT 337096 6963190 HPG27_304 Helicobacter pylori G27 nuclease NucT YP_002265936.1 336554 D 563041 CDS YP_002265937.1 208434271 6963191 complement(337105..337842) 1 NC_011333.1 outer membrane protein 337842 horC 6963191 horC Helicobacter pylori G27 outer membrane protein YP_002265937.1 337105 R 563041 CDS YP_002265938.1 208434272 6963192 337983..338696 1 NC_011333.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 338696 flgH 6963192 flgH Helicobacter pylori G27 flagellar basal body L-ring protein YP_002265938.1 337983 D 563041 CDS YP_002265939.1 208434273 6963193 338714..339403 1 NC_011333.1 CMP-N-acetyl neuraminic acid synthetase 339403 neuA-1 6963193 neuA-1 Helicobacter pylori G27 CMP-N-acetyl neuraminic acid synthetase YP_002265939.1 338714 D 563041 CDS YP_002265940.1 208434274 6963194 339409..340266 1 NC_011333.1 CMP-N-acetyl neuraminic acid synthetase 340266 neuA-2 6963194 neuA-2 Helicobacter pylori G27 CMP-N-acetyl neuraminic acid synthetase YP_002265940.1 339409 D 563041 CDS YP_002265941.1 208434275 6963195 340263..340805 1 NC_011333.1 flagellar biosynthesis protein G 340805 flaG-1 6963195 flaG-1 Helicobacter pylori G27 flagellar biosynthesis protein G YP_002265941.1 340263 D 563041 CDS YP_002265942.1 208434276 6963196 complement(340738..341676) 1 NC_011333.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 341676 lpxK 6963196 lpxK Helicobacter pylori G27 tetraacyldisaccharide 4'-kinase YP_002265942.1 340738 R 563041 CDS YP_002265943.1 208434277 6963197 complement(341673..342455) 1 NC_011333.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; NAD synthetase 342455 6963197 HPG27_311 Helicobacter pylori G27 NAD synthetase YP_002265943.1 341673 R 563041 CDS YP_002265944.1 208434278 6963199 342676..343695 1 NC_011333.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 343695 6963199 HPG27_312 Helicobacter pylori G27 ketol-acid reductoisomerase YP_002265944.1 342676 D 563041 CDS YP_002265945.1 208434279 6963200 343719..344525 1 NC_011333.1 cell division inhibitor 344525 minD 6963200 minD Helicobacter pylori G27 cell division inhibitor YP_002265945.1 343719 D 563041 CDS YP_002265946.1 208434280 6963201 344522..344755 1 NC_011333.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 344755 minE 6963201 minE Helicobacter pylori G27 cell division topological specificity factor MinE YP_002265946.1 344522 D 563041 CDS YP_002265947.1 208434281 6963202 344762..345562 1 NC_011333.1 DNA processing chain A 345562 dprA 6963202 dprA Helicobacter pylori G27 DNA processing chain A YP_002265947.1 344762 D 563041 CDS YP_002265948.1 208434282 6963203 345559..345963 1 NC_011333.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 345963 6963203 HPG27_316 Helicobacter pylori G27 Holliday junction resolvase-like protein YP_002265948.1 345559 D 563041 CDS YP_002265949.1 208434283 6963204 346081..346764 1 NC_011333.1 cysteine-rich protein C 346764 6963204 HPG27_317 Helicobacter pylori G27 cysteine-rich protein C YP_002265949.1 346081 D 563041 CDS YP_002265950.1 208434284 6963205 346879..347217 1 NC_011333.1 hypothetical protein 347217 6963205 HPG27_318 Helicobacter pylori G27 hypothetical protein YP_002265950.1 346879 D 563041 CDS YP_002265951.1 208434285 6963206 347234..347761 1 NC_011333.1 hypothetical protein 347761 6963206 HPG27_319 Helicobacter pylori G27 hypothetical protein YP_002265951.1 347234 D 563041 CDS YP_002265952.1 208434286 6963207 347894..348448 1 NC_011333.1 hypothetical protein 348448 6963207 HPG27_320 Helicobacter pylori G27 hypothetical protein YP_002265952.1 347894 D 563041 CDS YP_002265953.1 208434287 6963208 complement(348668..348961) 1 NC_011333.1 hypothetical protein 348961 6963208 HPG27_321 Helicobacter pylori G27 hypothetical protein YP_002265953.1 348668 R 563041 CDS YP_002265954.1 208434288 6963209 349127..349912 1 NC_011333.1 hypothetical protein 349912 6963209 HPG27_322 Helicobacter pylori G27 hypothetical protein YP_002265954.1 349127 D 563041 CDS YP_002265955.1 208434289 6963210 350091..351071 1 NC_011333.1 hypothetical protein 351071 6963210 HPG27_323 Helicobacter pylori G27 hypothetical protein YP_002265955.1 350091 D 563041 CDS YP_002265956.1 208434290 6963211 complement(351089..351982) 1 NC_011333.1 pseudo uridine synthase D 351982 6963211 HPG27_324 Helicobacter pylori G27 pseudo uridine synthase D YP_002265956.1 351089 R 563041 CDS YP_002265957.1 208434291 6963212 complement(351982..353532) 1 NC_011333.1 single-stranded-DNA specific exonuclease 353532 recJ 6963212 recJ Helicobacter pylori G27 single-stranded-DNA specific exonuclease YP_002265957.1 351982 R 563041 CDS YP_002265958.1 208434292 6963213 complement(353541..355157) 1 NC_011333.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 355157 pyrG 6963213 pyrG Helicobacter pylori G27 CTP synthetase YP_002265958.1 353541 R 563041 CDS YP_002265959.1 208434293 6963214 355418..356086 1 NC_011333.1 hypothetical protein 356086 6963214 HPG27_327 Helicobacter pylori G27 hypothetical protein YP_002265959.1 355418 D 563041 CDS YP_002265960.1 208434294 6963215 356130..357833 1 NC_011333.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 357833 fliF 6963215 fliF Helicobacter pylori G27 flagellar MS-ring protein YP_002265960.1 356130 D 563041 CDS YP_002265961.1 208434295 6963216 357851..358882 1 NC_011333.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 358882 fliG 6963216 fliG Helicobacter pylori G27 flagellar motor switch protein G YP_002265961.1 357851 D 563041 CDS YP_002265962.1 208434296 6963217 358893..359645 1 NC_011333.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 359645 fliH 6963217 fliH Helicobacter pylori G27 flagellar assembly protein H YP_002265962.1 358893 D 563041 CDS YP_002265963.1 208434297 6963218 359642..361498 1 NC_011333.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 361498 6963218 HPG27_331 Helicobacter pylori G27 1-deoxy-D-xylulose-5-phosphate synthase YP_002265963.1 359642 D 563041 CDS YP_002265964.1 208434298 6963219 361495..363303 1 NC_011333.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 363303 lepA 6963219 lepA Helicobacter pylori G27 GTP-binding protein LepA YP_002265964.1 361495 D 563041 CDS YP_002265965.1 208434299 6963220 363318..364073 1 NC_011333.1 hypothetical protein 364073 6963220 HPG27_333 Helicobacter pylori G27 hypothetical protein YP_002265965.1 363318 D 563041 CDS YP_002265966.1 208434300 6963221 364427..365029 1 NC_011333.1 hypothetical protein 365029 6963221 HPG27_334 Helicobacter pylori G27 hypothetical protein YP_002265966.1 364427 D 563041 CDS YP_002265967.1 208434301 6963222 365126..366433 1 NC_011333.1 hypothetical protein 366433 6963222 HPG27_335 Helicobacter pylori G27 hypothetical protein YP_002265967.1 365126 D 563041 CDS YP_002265968.1 208434302 6963223 366486..366731 1 NC_011333.1 hypothetical protein 366731 6963223 HPG27_336 Helicobacter pylori G27 hypothetical protein YP_002265968.1 366486 D 563041 CDS YP_002265969.1 208434303 6963224 complement(366728..367537) 1 NC_011333.1 flagellar basal-body rod protein 367537 flgG-1 6963224 flgG-1 Helicobacter pylori G27 flagellar basal-body rod protein YP_002265969.1 366728 R 563041 CDS YP_002265970.1 208434304 6963225 complement(367591..368877) 1 NC_011333.1 alpha-ketoglutarate permease 368877 6963225 HPG27_338 Helicobacter pylori G27 alpha-ketoglutarate permease YP_002265970.1 367591 R 563041 CDS YP_002265971.1 208434305 6963226 368980..369132 1 NC_011333.1 hypothetical protein 369132 6963226 HPG27_339 Helicobacter pylori G27 hypothetical protein YP_002265971.1 368980 D 563041 CDS YP_002265972.1 208434306 6963227 complement(369142..371721) 1 NC_011333.1 cell division protein 371721 ftsK 6963227 ftsK Helicobacter pylori G27 cell division protein YP_002265972.1 369142 R 563041 CDS YP_002265973.1 208434307 6963228 complement(371718..374039) 1 NC_011333.1 hypothetical protein 374039 6963228 HPG27_341 Helicobacter pylori G27 hypothetical protein YP_002265973.1 371718 R 563041 CDS YP_002265974.1 208434308 6963229 complement(374036..375961) 1 NC_011333.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 375961 6963229 HPG27_342 Helicobacter pylori G27 transketolase YP_002265974.1 374036 R 563041 CDS YP_002265975.1 208434309 6963230 complement(376008..376781) 1 NC_011333.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 376781 6963230 HPG27_343 Helicobacter pylori G27 bifunctional riboflavin kinase/FMN adenylyltransferase YP_002265975.1 376008 R 563041 CDS YP_002265976.1 208434310 6963231 complement(376816..377523) 1 NC_011333.1 hemolysin 377523 6963231 HPG27_344 Helicobacter pylori G27 hemolysin YP_002265976.1 376816 R 563041 CDS YP_002265977.1 208434311 6963232 complement(377523..378038) 1 NC_011333.1 hypothetical protein 378038 6963232 HPG27_345 Helicobacter pylori G27 hypothetical protein YP_002265977.1 377523 R 563041 CDS YP_002265978.1 208434312 6963233 378105..379028 1 NC_011333.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase catalytic subunit 379028 pyrB 6963233 pyrB Helicobacter pylori G27 aspartate carbamoyltransferase catalytic subunit YP_002265978.1 378105 D 563041 CDS YP_002265979.1 208434313 6963234 379322..380761 1 NC_011333.1 outer membrane protein 380761 hofB 6963234 hofB Helicobacter pylori G27 outer membrane protein YP_002265979.1 379322 D 563041 CDS YP_002265980.1 208434314 6963235 380852..382507 1 NC_011333.1 multidrug resistance protein 382507 6963235 HPG27_348 Helicobacter pylori G27 multidrug resistance protein YP_002265980.1 380852 D 563041 CDS YP_002265981.1 208434315 6963236 382663..383124 1 NC_011333.1 hypothetical protein 383124 6963236 HPG27_349 Helicobacter pylori G27 hypothetical protein YP_002265981.1 382663 D 563041 CDS YP_002265982.1 208434316 6963237 383128..383697 1 NC_011333.1 hypothetical protein 383697 6963237 HPG27_350 Helicobacter pylori G27 hypothetical protein YP_002265982.1 383128 D 563041 CDS YP_002265983.1 208434317 6963238 383822..384817 1 NC_011333.1 high affinity nickel transport protein 384817 nixA 6963238 nixA Helicobacter pylori G27 high affinity nickel transport protein YP_002265983.1 383822 D 563041 CDS YP_002265984.1 208434318 6963239 complement(384821..385342) 1 NC_011333.1 hypothetical protein 385342 6963239 HPG27_352 Helicobacter pylori G27 hypothetical protein YP_002265984.1 384821 R 563041 CDS YP_002265985.1 208434319 6963240 385477..386793 1 NC_011333.1 hypothetical protein 386793 6963240 HPG27_353 Helicobacter pylori G27 hypothetical protein YP_002265985.1 385477 D 563041 CDS YP_002265986.1 208434320 6963241 387010..387171 1 NC_011333.1 hypothetical protein 387171 6963241 HPG27_354 Helicobacter pylori G27 hypothetical protein YP_002265986.1 387010 D 563041 CDS YP_002265987.1 208434321 6963242 complement(387476..387676) 1 NC_011333.1 copper ion binding protein 387676 copP 6963242 copP Helicobacter pylori G27 copper ion binding protein YP_002265987.1 387476 R 563041 CDS YP_002265988.1 208434322 6963243 complement(387677..389914) 1 NC_011333.1 copper-transporting ATPase 389914 copA 6963243 copA Helicobacter pylori G27 copper-transporting ATPase YP_002265988.1 387677 R 563041 CDS YP_002265989.1 208434323 6963244 complement(389911..390561) 1 NC_011333.1 phosphatidyl serine synthase 390561 pssA 6963244 pssA Helicobacter pylori G27 phosphatidyl serine synthase YP_002265989.1 389911 R 563041 CDS YP_002265990.1 208434324 6963245 complement(390614..390868) 1 NC_011333.1 hypothetical protein 390868 6963245 HPG27_358 Helicobacter pylori G27 hypothetical protein YP_002265990.1 390614 R 563041 CDS YP_002265991.1 208434325 6963246 complement(390871..392769) 1 NC_011333.1 cell division protein 392769 ftsH-2 6963246 ftsH-2 Helicobacter pylori G27 cell division protein YP_002265991.1 390871 R 563041 CDS YP_002265992.1 208434326 6963247 complement(392778..393755) 1 NC_011333.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 393755 prmA 6963247 prmA Helicobacter pylori G27 ribosomal protein L11 methyltransferase YP_002265992.1 392778 R 563041 CDS YP_002265993.1 208434327 6963248 complement(393768..394142) 1 NC_011333.1 chemotaxis protein 394142 cheY 6963248 cheY Helicobacter pylori G27 chemotaxis protein YP_002265993.1 393768 R 563041 CDS YP_002265994.1 208434328 6963249 394463..395035 1 NC_011333.1 outer membrane protein 395035 horD 6963249 horD Helicobacter pylori G27 outer membrane protein YP_002265994.1 394463 D 563041 CDS YP_002265995.1 208434329 6963251 complement(395167..395574) 1 NC_011333.1 hypothetical protein 395574 6963251 HPG27_363 Helicobacter pylori G27 hypothetical protein YP_002265995.1 395167 R 563041 CDS YP_002265996.1 208434330 6963252 complement(395577..395786) 1 NC_011333.1 hypothetical protein 395786 6963252 HPG27_364 Helicobacter pylori G27 hypothetical protein YP_002265996.1 395577 R 563041 CDS YP_002265997.1 208434331 6963253 complement(395801..396337) 1 NC_011333.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 396337 gidB 6963253 gidB Helicobacter pylori G27 16S rRNA methyltransferase GidB YP_002265997.1 395801 R 563041 CDS YP_002265998.1 208434332 6963254 complement(396334..397371) 1 NC_011333.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 397371 queA 6963254 queA Helicobacter pylori G27 S-adenosylmethionine:tRNA ribosyltransferase-isomerase YP_002265998.1 396334 R 563041 CDS YP_002265999.1 208434333 6963255 complement(397372..398073) 1 NC_011333.1 sec-independent protein translocase protein 398073 6963255 HPG27_367 Helicobacter pylori G27 sec-independent protein translocase protein YP_002265999.1 397372 R 563041 CDS YP_002266000.1 208434334 6963256 complement(398114..398581) 1 NC_011333.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 398581 6963256 HPG27_368 Helicobacter pylori G27 sec-independent translocase YP_002266000.1 398114 R 563041 CDS YP_002266001.1 208434335 6963257 complement(398649..399659) 1 NC_011333.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 399659 ruvB 6963257 ruvB Helicobacter pylori G27 Holliday junction DNA helicase RuvB YP_002266001.1 398649 R 563041 CDS YP_002266002.1 208434336 6963258 complement(399660..400472) 1 NC_011333.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 400472 panB 6963258 panB Helicobacter pylori G27 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_002266002.1 399660 R 563041 CDS YP_002266003.1 208434337 6963260 401377..402192 1 NC_011333.1 hypothetical protein 402192 6963260 HPG27_372 Helicobacter pylori G27 hypothetical protein YP_002266003.1 401377 D 563041 CDS YP_002266004.1 208434338 6963261 402201..403145 1 NC_011333.1 hypothetical protein 403145 6963261 HPG27_373 Helicobacter pylori G27 hypothetical protein YP_002266004.1 402201 D 563041 CDS YP_002266005.1 208434339 6963262 403155..404477 1 NC_011333.1 hypothetical protein 404477 6963262 HPG27_374 Helicobacter pylori G27 hypothetical protein YP_002266005.1 403155 D 563041 CDS YP_002266006.1 208434340 6963263 404480..405067 1 NC_011333.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 405067 minC 6963263 minC Helicobacter pylori G27 septum formation inhibitor YP_002266006.1 404480 D 563041 CDS YP_002266007.1 208434341 6963264 405064..405951 1 NC_011333.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 405951 lpxC 6963264 lpxC Helicobacter pylori G27 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase YP_002266007.1 405064 D 563041 CDS YP_002266008.1 208434342 6963265 405973..406446 1 NC_011333.1 hypothetical protein 406446 6963265 HPG27_377 Helicobacter pylori G27 hypothetical protein YP_002266008.1 405973 D 563041 CDS YP_002266009.1 208434343 6963266 406500..407381 1 NC_011333.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 407381 6963266 HPG27_378 Helicobacter pylori G27 homoserine kinase YP_002266009.1 406500 D 563041 CDS YP_002266010.1 208434344 6963267 407395..407622 1 NC_011333.1 hypothetical protein 407622 6963267 HPG27_379 Helicobacter pylori G27 hypothetical protein YP_002266010.1 407395 D 563041 CDS YP_002266011.1 208434345 6963268 407619..410432 1 NC_011333.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 410432 infB 6963268 infB Helicobacter pylori G27 translation initiation factor IF-2 YP_002266011.1 407619 D 563041 CDS YP_002266012.1 208434346 6963269 410432..410767 1 NC_011333.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 410767 rbfA 6963269 rbfA Helicobacter pylori G27 ribosome-binding factor A YP_002266012.1 410432 D 563041 CDS YP_002266013.1 208434347 6963270 410793..411200 1 NC_011333.1 hypothetical protein 411200 6963270 HPG27_382 Helicobacter pylori G27 hypothetical protein YP_002266013.1 410793 D 563041 CDS YP_002266014.1 208434348 6963271 complement(411308..413296) 1 NC_011333.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; acetyl-CoA synthetase 413296 6963271 HPG27_383 Helicobacter pylori G27 acetyl-CoA synthetase YP_002266014.1 411308 R 563041 CDS YP_002266015.1 208434349 6963272 413496..414608 1 NC_011333.1 integral membrane protein 414608 6963272 HPG27_384 Helicobacter pylori G27 integral membrane protein YP_002266015.1 413496 D 563041 CDS YP_002266016.1 208434350 6963273 414948..415619 1 NC_011333.1 putative transcriptional regulator 415619 6963273 HPG27_385 Helicobacter pylori G27 putative transcriptional regulator YP_002266016.1 414948 D 563041 CDS YP_002266017.1 208434351 6963274 complement(416420..417463) 1 NC_011333.1 hypothetical protein 417463 6963274 HPG27_386 Helicobacter pylori G27 hypothetical protein YP_002266017.1 416420 R 563041 CDS YP_002266018.1 208434352 6963275 complement(417493..419694) 1 NC_011333.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 419694 flhA 6963275 flhA Helicobacter pylori G27 flagellar biosynthesis protein FlhA YP_002266018.1 417493 R 563041 CDS YP_002266019.1 208434353 6963276 419827..420099 1 NC_011333.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 420099 rpsO 6963276 rpsO Helicobacter pylori G27 30S ribosomal protein S15 YP_002266019.1 419827 D 563041 CDS YP_002266020.1 208434354 6963277 420130..421419 1 NC_011333.1 hypothetical protein 421419 6963277 HPG27_389 Helicobacter pylori G27 hypothetical protein YP_002266020.1 420130 D 563041 CDS YP_002266021.1 208434355 6963278 421549..422052 1 NC_011333.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 422052 6963278 HPG27_390 Helicobacter pylori G27 3-dehydroquinate dehydratase YP_002266021.1 421549 D 563041 CDS YP_002266022.1 208434356 6963279 422066..423139 1 NC_011333.1 proline peptidase 423139 6963279 HPG27_391 Helicobacter pylori G27 proline peptidase YP_002266022.1 422066 D 563041 CDS YP_002266023.1 208434357 6963280 423139..423627 1 NC_011333.1 7,8-dihydro-6-hydroxy methylpterin-pyrophosphokinase 423627 6963280 HPG27_392 Helicobacter pylori G27 7,8-dihydro-6-hydroxy methylpterin-pyrophosphokinase YP_002266023.1 423139 D 563041 CDS YP_002266024.1 208434358 6963281 423624..424994 1 NC_011333.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 424994 flhF 6963281 flhF Helicobacter pylori G27 flagellar biosynthesis regulator FlhF YP_002266024.1 423624 D 563041 CDS YP_002266025.1 208434359 6963282 424991..425875 1 NC_011333.1 ATP-binding protein 425875 6963282 HPG27_394 Helicobacter pylori G27 ATP-binding protein YP_002266025.1 424991 D 563041 CDS YP_002266026.1 208434360 6963283 425880..426194 1 NC_011333.1 hypothetical protein 426194 6963283 HPG27_395 Helicobacter pylori G27 hypothetical protein YP_002266026.1 425880 D 563041 CDS YP_002266027.1 208434361 6963284 426196..426939 1 NC_011333.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 426939 fliA 6963284 fliA Helicobacter pylori G27 flagellar biosynthesis sigma factor YP_002266027.1 426196 D 563041 CDS YP_002266028.1 208434362 6963285 426992..427996 1 NC_011333.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 427996 fliM 6963285 fliM Helicobacter pylori G27 flagellar motor switch protein FliM YP_002266028.1 426992 D 563041 CDS YP_002266029.1 208434363 6963286 428000..428863 1 NC_011333.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY 428863 fliY-1 6963286 fliY-1 Helicobacter pylori G27 flagellar motor switch protein FliY YP_002266029.1 428000 D 563041 CDS YP_002266030.1 208434364 6963287 428893..429429 1 NC_011333.1 hypothetical protein 429429 6963287 HPG27_399 Helicobacter pylori G27 hypothetical protein YP_002266030.1 428893 D 563041 CDS YP_002266031.1 208434365 6963288 429426..429929 1 NC_011333.1 hypothetical protein 429929 6963288 HPG27_400 Helicobacter pylori G27 hypothetical protein YP_002266031.1 429426 D 563041 CDS YP_002266032.1 208434366 6963289 complement(429949..430401) 1 NC_011333.1 ferric uptake regulation protein 430401 6963289 HPG27_401 Helicobacter pylori G27 ferric uptake regulation protein YP_002266032.1 429949 R 563041 CDS YP_002266033.1 208434367 6963290 complement(430561..431736) 1 NC_011333.1 recombination factor protein RarA 431736 6963290 HPG27_402 Helicobacter pylori G27 recombination factor protein RarA YP_002266033.1 430561 R 563041 CDS YP_002266034.1 208434368 6963291 complement(431777..432103) 1 NC_011333.1 putative heatshock protein 432103 6963291 HPG27_403 Helicobacter pylori G27 putative heatshock protein YP_002266034.1 431777 R 563041 CDS YP_002266035.1 208434369 6963292 complement(432113..432979) 1 NC_011333.1 co-chaperone-curved DNA binding protein A 432979 6963292 HPG27_404 Helicobacter pylori G27 co-chaperone-curved DNA binding protein A YP_002266035.1 432113 R 563041 CDS YP_002266036.1 208434370 6963294 complement(434490..435326) 1 NC_011333.1 DNA-polymerase I-like 5'-3' exonuclease 435326 6963294 HPG27_406 Helicobacter pylori G27 DNA-polymerase I-like 5'-3' exonuclease YP_002266036.1 434490 R 563041 CDS YP_002266037.1 208434371 6963295 complement(435366..435527) 1 NC_011333.1 hypothetical protein 435527 6963295 HPG27_407 Helicobacter pylori G27 hypothetical protein YP_002266037.1 435366 R 563041 CDS YP_002266038.1 208434372 6963296 complement(435582..436478) 1 NC_011333.1 response regulator 436478 6963296 HPG27_408 Helicobacter pylori G27 response regulator YP_002266038.1 435582 R 563041 CDS YP_002266039.1 208434373 6963297 complement(436500..437720) 1 NC_011333.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein 437720 ispDF 6963297 ispDF Helicobacter pylori G27 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase protein YP_002266039.1 436500 R 563041 CDS YP_002266040.1 208434374 6963298 complement(437742..439172) 1 NC_011333.1 protease DO 439172 htrA 6963298 htrA Helicobacter pylori G27 protease DO YP_002266040.1 437742 R 563041 CDS YP_002266041.1 208434375 6963299 complement(439216..440658) 1 NC_011333.1 amino acid permease 440658 6963299 HPG27_411 Helicobacter pylori G27 amino acid permease YP_002266041.1 439216 R 563041 CDS YP_002266042.1 208434376 6963300 complement(441015..441410) 1 NC_011333.1 phosphatidyl glycerophosphate synthase 441410 6963300 HPG27_412 Helicobacter pylori G27 phosphatidyl glycerophosphate synthase YP_002266042.1 441015 R 563041 CDS YP_002266043.1 208434377 6963301 complement(441407..442015) 1 NC_011333.1 hypothetical protein 442015 6963301 HPG27_413 Helicobacter pylori G27 hypothetical protein YP_002266043.1 441407 R 563041 CDS YP_002266044.1 208434378 6963302 complement(442025..442813) 1 NC_011333.1 Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 442813 6963302 HPG27_414 Helicobacter pylori G27 7-alpha-hydroxysteroid dehydrogenase YP_002266044.1 442025 R 563041 CDS YP_002266045.1 208434379 6963303 complement(442810..443712) 1 NC_011333.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 443712 6963303 HPG27_415 Helicobacter pylori G27 dihydrodipicolinate synthase YP_002266045.1 442810 R 563041 CDS YP_002266046.1 208434380 6963304 complement(443727..445061) 1 NC_011333.1 putative zinc protease 445061 6963304 HPG27_416 Helicobacter pylori G27 putative zinc protease YP_002266046.1 443727 R 563041 CDS YP_002266047.1 208434381 6963305 complement(445058..446113) 1 NC_011333.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; dihydroorotate dehydrogenase 2 446113 6963305 HPG27_417 Helicobacter pylori G27 dihydroorotate dehydrogenase 2 YP_002266047.1 445058 R 563041 CDS YP_002266048.1 208434382 6963306 complement(446151..448178) 1 NC_011333.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 448178 6963306 HPG27_418 Helicobacter pylori G27 polyphosphate kinase YP_002266048.1 446151 R 563041 CDS YP_002266049.1 208434383 6963308 complement(448839..449804) 1 NC_011333.1 type I restriction enzyme S protein 449804 6963308 HPG27_419 Helicobacter pylori G27 type I restriction enzyme S protein YP_002266049.1 448839 R 563041 CDS YP_002266050.1 208434384 6963309 complement(449950..451563) 1 NC_011333.1 type I restriction enzyme M protein 451563 6963309 HPG27_420 Helicobacter pylori G27 type I restriction enzyme M protein YP_002266050.1 449950 R 563041 CDS YP_002266051.1 208434385 6963310 complement(451574..453862) 1 NC_011333.1 type I restriction enzyme R protein 453862 6963310 HPG27_421 Helicobacter pylori G27 type I restriction enzyme R protein YP_002266051.1 451574 R 563041 CDS YP_002266052.1 208434386 6963311 complement(454098..454739) 1 NC_011333.1 type I restriction enzyme R protein 454739 6963311 HPG27_422 Helicobacter pylori G27 type I restriction enzyme R protein YP_002266052.1 454098 R 563041 CDS YP_002266053.1 208434387 6963312 complement(454787..456682) 1 NC_011333.1 hypothetical protein 456682 6963312 HPG27_423 Helicobacter pylori G27 hypothetical protein YP_002266053.1 454787 R 563041 CDS YP_002266054.1 208434388 6963313 complement(456708..457475) 1 NC_011333.1 hypothetical protein 457475 6963313 HPG27_424 Helicobacter pylori G27 hypothetical protein YP_002266054.1 456708 R 563041 CDS YP_002266055.1 208434389 6963314 complement(457485..457799) 1 NC_011333.1 hypothetical protein 457799 6963314 HPG27_425 Helicobacter pylori G27 hypothetical protein YP_002266055.1 457485 R 563041 CDS YP_002266056.1 208434390 6963315 complement(457801..459288) 1 NC_011333.1 hypothetical protein 459288 6963315 HPG27_426 Helicobacter pylori G27 hypothetical protein YP_002266056.1 457801 R 563041 CDS YP_002266057.1 208434391 6963316 complement(459300..459740) 1 NC_011333.1 hypothetical protein 459740 6963316 HPG27_427 Helicobacter pylori G27 hypothetical protein YP_002266057.1 459300 R 563041 CDS YP_002266058.1 208434392 6963317 complement(459773..461509) 1 NC_011333.1 oligoendopeptidase F 461509 6963317 HPG27_428 Helicobacter pylori G27 oligoendopeptidase F YP_002266058.1 459773 R 563041 CDS YP_002266059.1 208434393 6963318 complement(461607..462857) 1 NC_011333.1 glutathione-regulated potassium-efflux system protein 462857 6963318 HPG27_429 Helicobacter pylori G27 glutathione-regulated potassium-efflux system protein YP_002266059.1 461607 R 563041 CDS YP_002266060.1 208434394 6963319 complement(463178..463738) 1 NC_011333.1 outer membrane protein 463738 horE 6963319 horE Helicobacter pylori G27 outer membrane protein YP_002266060.1 463178 R 563041 CDS YP_002266061.1 208434395 6963320 463965..464705 1 NC_011333.1 molybdenum ABC transporter 464705 modA 6963320 modA Helicobacter pylori G27 molybdenum ABC transporter YP_002266061.1 463965 D 563041 CDS YP_002266062.1 208434396 6963321 464727..465401 1 NC_011333.1 molybdenum ABC transporter 465401 modB 6963321 modB Helicobacter pylori G27 molybdenum ABC transporter YP_002266062.1 464727 D 563041 CDS YP_002266063.1 208434397 6963322 465398..466195 1 NC_011333.1 molybdenum ABCtransporter ModD 466195 modD 6963322 modD Helicobacter pylori G27 molybdenum ABCtransporter ModD YP_002266063.1 465398 D 563041 CDS YP_002266064.1 208434398 6963323 complement(466281..467672) 1 NC_011333.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 467672 gltX 6963323 gltX Helicobacter pylori G27 glutamyl-tRNA synthetase YP_002266064.1 466281 R 563041 CDS YP_002266065.1 208434399 6963324 467790..468893 1 NC_011333.1 outer membrane protein 468893 hopK-1 6963324 hopK-1 Helicobacter pylori G27 outer membrane protein YP_002266065.1 467790 D 563041 CDS YP_002266066.1 208434400 6963325 468902..470539 1 NC_011333.1 type II adenine specific methyltransferase 470539 6963325 HPG27_436 Helicobacter pylori G27 type II adenine specific methyltransferase YP_002266066.1 468902 D 563041 CDS YP_002266067.1 208434401 6963326 470613..471347 1 NC_011333.1 DD-heptosyl transferase 471347 6963326 HPG27_437 Helicobacter pylori G27 DD-heptosyl transferase YP_002266067.1 470613 D 563041 CDS YP_002266068.1 208434402 6963327 471393..473195 1 NC_011333.1 GTP-binding protein 473195 6963327 HPG27_438 Helicobacter pylori G27 GTP-binding protein YP_002266068.1 471393 D 563041 CDS YP_002266069.1 208434403 6963328 473207..474136 1 NC_011333.1 type II adenine specific DNA methyltransferase 474136 6963328 HPG27_439 Helicobacter pylori G27 type II adenine specific DNA methyltransferase YP_002266069.1 473207 D 563041 CDS YP_002266070.1 208434404 6963329 474139..474552 1 NC_011333.1 type II restriction endonuclease 474552 6963329 HPG27_440 Helicobacter pylori G27 type II restriction endonuclease YP_002266070.1 474139 D 563041 CDS YP_002266071.1 208434405 6963330 474852..475898 1 NC_011333.1 type II DNA modification enzyme 475898 6963330 HPG27_441 Helicobacter pylori G27 type II DNA modification enzyme YP_002266071.1 474852 D 563041 CDS YP_002266072.1 208434406 6963331 475946..476125 1 NC_011333.1 hypothetical protein 476125 6963331 HPG27_442 Helicobacter pylori G27 hypothetical protein YP_002266072.1 475946 D 563041 CDS YP_002266073.1 208434407 6963332 476131..476652 1 NC_011333.1 hypothetical protein 476652 6963332 HPG27_443 Helicobacter pylori G27 hypothetical protein YP_002266073.1 476131 D 563041 CDS YP_002266074.1 208434408 6963333 complement(476886..477830) 1 NC_011333.1 catalase-like protein 477830 6963333 HPG27_444 Helicobacter pylori G27 catalase-like protein YP_002266074.1 476886 R 563041 CDS YP_002266075.1 208434409 6963334 478120..479706 1 NC_011333.1 outer membrane protein 479706 hofC 6963334 hofC Helicobacter pylori G27 outer membrane protein YP_002266075.1 478120 D 563041 CDS YP_002266076.1 208434410 6963335 479777..481174 1 NC_011333.1 outer membrane protein 481174 6963335 HPG27_446 Helicobacter pylori G27 outer membrane protein YP_002266076.1 479777 D 563041 CDS YP_002266077.1 208434411 6963336 481576..483813 1 NC_011333.1 hypothetical protein 483813 6963336 HPG27_447 Helicobacter pylori G27 hypothetical protein YP_002266077.1 481576 D 563041 CDS YP_002266078.1 208434412 6963337 483810..484667 1 NC_011333.1 hypothetical protein 484667 6963337 HPG27_448 Helicobacter pylori G27 hypothetical protein YP_002266078.1 483810 D 563041 CDS YP_002266079.1 208434413 6963338 484688..484882 1 NC_011333.1 hypothetical protein 484882 6963338 HPG27_449 Helicobacter pylori G27 hypothetical protein YP_002266079.1 484688 D 563041 CDS YP_002266080.1 208434414 6963339 complement(485047..486189) 1 NC_011333.1 putative potassium channel protein 486189 6963339 HPG27_450 Helicobacter pylori G27 putative potassium channel protein YP_002266080.1 485047 R 563041 CDS YP_002266081.1 208434415 6963340 complement(486334..486522) 1 NC_011333.1 required for 70S ribosome assembly; 50S ribosomal protein L28 486522 rpmB 6963340 rpmB Helicobacter pylori G27 50S ribosomal protein L28 YP_002266081.1 486334 R 563041 CDS YP_002266082.1 208434416 6963341 complement(486621..487457) 1 NC_011333.1 neuraminyllactose-binding hemagglutinin 487457 hpaA 6963341 hpaA Helicobacter pylori G27 neuraminyllactose-binding hemagglutinin YP_002266082.1 486621 R 563041 CDS YP_002266083.1 208434417 6963342 487562..488644 1 NC_011333.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 488644 mraY 6963342 mraY Helicobacter pylori G27 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_002266083.1 487562 D 563041 CDS YP_002266084.1 208434418 6963343 488646..489914 1 NC_011333.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 489914 murD 6963343 murD Helicobacter pylori G27 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_002266084.1 488646 D 563041 CDS YP_002266085.1 208434419 6963344 complement(489911..490114) 1 NC_011333.1 hypothetical protein 490114 6963344 HPG27_455 Helicobacter pylori G27 hypothetical protein YP_002266085.1 489911 R 563041 CDS YP_002266086.1 208434420 6963345 complement(490161..490562) 1 NC_011333.1 hypothetical protein 490562 6963345 HPG27_456 Helicobacter pylori G27 hypothetical protein YP_002266086.1 490161 R 563041 CDS YP_002266087.1 208434421 6963346 490792..492120 1 NC_011333.1 sodium-and chloride-dependent transporter 492120 6963346 HPG27_457 Helicobacter pylori G27 sodium-and chloride-dependent transporter YP_002266087.1 490792 D 563041 CDS YP_002266088.1 208434422 6963347 492133..493461 1 NC_011333.1 sodium-and chloride-dependent transporter 493461 6963347 HPG27_458 Helicobacter pylori G27 sodium-and chloride-dependent transporter YP_002266088.1 492133 D 563041 CDS YP_002266089.1 208434423 6963349 494599..495723 1 NC_011333.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 495723 dnaN 6963349 dnaN Helicobacter pylori G27 DNA polymerase III subunit beta YP_002266089.1 494599 D 563041 CDS YP_002266090.1 208434424 6963350 495736..498057 1 NC_011333.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 498057 gyrB 6963350 gyrB Helicobacter pylori G27 DNA gyrase subunit B YP_002266090.1 495736 D 563041 CDS YP_002266091.1 208434425 6963351 498103..499095 1 NC_011333.1 hypothetical protein 499095 6963351 HPG27_462 Helicobacter pylori G27 hypothetical protein YP_002266091.1 498103 D 563041 CDS YP_002266092.1 208434426 6963352 499157..499720 1 NC_011333.1 hypothetical protein 499720 6963352 HPG27_463 Helicobacter pylori G27 hypothetical protein YP_002266092.1 499157 D 563041 CDS YP_002266093.1 208434427 6963353 499929..501140 1 NC_011333.1 putative outer membrane protein 501140 6963353 HPG27_464 Helicobacter pylori G27 putative outer membrane protein YP_002266093.1 499929 D 563041 CDS YP_002266094.1 208434428 6963354 501140..501766 1 NC_011333.1 hypothetical protein 501766 6963354 HPG27_465 Helicobacter pylori G27 hypothetical protein YP_002266094.1 501140 D 563041 CDS YP_002266095.1 208434429 6963355 501777..503126 1 NC_011333.1 plasminogen binding protein 503126 6963355 HPG27_466 Helicobacter pylori G27 plasminogen binding protein YP_002266095.1 501777 D 563041 CDS YP_002266096.1 208434430 6963356 503128..504507 1 NC_011333.1 glycolate oxidase subunit 504507 glcD 6963356 glcD Helicobacter pylori G27 glycolate oxidase subunit YP_002266096.1 503128 D 563041 CDS YP_002266097.1 208434431 6963357 504530..505294 1 NC_011333.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 505294 dapB 6963357 dapB Helicobacter pylori G27 dihydrodipicolinate reductase YP_002266097.1 504530 D 563041 CDS YP_002266098.1 208434432 6963358 505725..505895 1 NC_011333.1 urease-enhancing factor 505895 6963358 HPG27_469 Helicobacter pylori G27 urease-enhancing factor YP_002266098.1 505725 D 563041 CDS YP_002266099.1 208434433 6963359 505924..506085 1 NC_011333.1 hypothetical protein 506085 6963359 HPG27_470 Helicobacter pylori G27 hypothetical protein YP_002266099.1 505924 D 563041 CDS YP_002266100.1 208434434 6963360 complement(506148..507593) 1 NC_011333.1 glutamine synthetase 507593 glnA 6963360 glnA Helicobacter pylori G27 glutamine synthetase YP_002266100.1 506148 R 563041 CDS YP_002266101.1 208434435 6963361 507816..508112 1 NC_011333.1 hypothetical protein 508112 6963361 HPG27_472 Helicobacter pylori G27 hypothetical protein YP_002266101.1 507816 D 563041 CDS YP_002266102.1 208434436 6963362 508582..509031 1 NC_011333.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 509031 rplI 6963362 rplI Helicobacter pylori G27 50S ribosomal protein L9 YP_002266102.1 508582 D 563041 CDS YP_002266103.1 208434437 6963363 509035..509577 1 NC_011333.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 509577 6963363 HPG27_474 Helicobacter pylori G27 ATP-dependent protease peptidase subunit YP_002266103.1 509035 D 563041 CDS YP_002266104.1 208434438 6963364 509577..510908 1 NC_011333.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 510908 hslU 6963364 hslU Helicobacter pylori G27 ATP-dependent protease ATP-binding subunit HslU YP_002266104.1 509577 D 563041 CDS YP_002266105.1 208434439 6963365 510908..511813 1 NC_011333.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 511813 era 6963365 era Helicobacter pylori G27 GTP-binding protein Era YP_002266105.1 510908 D 563041 CDS YP_002266106.1 208434440 6963366 511810..512802 1 NC_011333.1 hypothetical protein 512802 6963366 HPG27_477 Helicobacter pylori G27 hypothetical protein YP_002266106.1 511810 D 563041 CDS YP_002266107.1 208434441 6963367 complement(512885..513766) 1 NC_011333.1 hypothetical protein 513766 6963367 HPG27_478 Helicobacter pylori G27 hypothetical protein YP_002266107.1 512885 R 563041 CDS YP_002266108.1 208434442 6963368 513910..514257 1 NC_011333.1 cag pathogenicity island protein 1 514257 cag1 6963368 cag1 Helicobacter pylori G27 cag pathogenicity island protein 1 YP_002266108.1 513910 D 563041 CDS YP_002266109.1 208434443 6963369 514464..514715 1 NC_011333.1 hypothetical protein 514715 6963369 HPG27_480 Helicobacter pylori G27 hypothetical protein YP_002266109.1 514464 D 563041 CDS YP_002266110.1 208434444 6963370 514715..516160 1 NC_011333.1 cag pathogenicity island protein 3 516160 cag3 6963370 cag3 Helicobacter pylori G27 cag pathogenicity island protein 3 YP_002266110.1 514715 D 563041 CDS YP_002266111.1 208434445 6963371 516165..516674 1 NC_011333.1 cag pathogenicity island protein 4 516674 cag4 6963371 cag4 Helicobacter pylori G27 cag pathogenicity island protein 4 YP_002266111.1 516165 D 563041 CDS YP_002266112.1 208434446 6963372 complement(516793..519039) 1 NC_011333.1 cag pathogenicity island protein 5 519039 cag5 6963372 cag5 Helicobacter pylori G27 cag pathogenicity island protein 5 YP_002266112.1 516793 R 563041 CDS YP_002266113.1 208434447 6963373 complement(519048..520040) 1 NC_011333.1 virB11-like cag pathogenicity islandencoded protein / ATPase 520040 6963373 HPG27_484 Helicobacter pylori G27 virB11-like cag pathogenicity islandencoded protein / ATPase YP_002266113.1 519048 R 563041 CDS YP_002266114.1 208434448 6963374 complement(520045..520644) 1 NC_011333.1 cag pathogenicity island protein Z 520644 cagZ 6963374 cagZ Helicobacter pylori G27 cag pathogenicity island protein Z YP_002266114.1 520045 R 563041 CDS YP_002266115.1 208434449 6963376 complement(526506..528071) 1 NC_011333.1 cag pathogenicity island protein X 528071 cagX 6963376 cagX Helicobacter pylori G27 cag pathogenicity island protein X YP_002266115.1 526506 R 563041 CDS YP_002266116.1 208434450 6963377 complement(528123..529730) 1 NC_011333.1 cag pathogenicity island protein W 529730 cagW 6963377 cagW Helicobacter pylori G27 cag pathogenicity island protein W YP_002266116.1 528123 R 563041 CDS YP_002266117.1 208434451 6963378 complement(529735..530493) 1 NC_011333.1 cag pathogenicity island protein V 530493 cagV 6963378 cagV Helicobacter pylori G27 cag pathogenicity island protein V YP_002266117.1 529735 R 563041 CDS YP_002266118.1 208434452 6963379 530890..531540 1 NC_011333.1 cag pathogenicity island protein U 531540 cagU 6963379 cagU Helicobacter pylori G27 cag pathogenicity island protein U YP_002266118.1 530890 D 563041 CDS YP_002266119.1 208434453 6963380 531553..532395 1 NC_011333.1 cag pathogenicity island protein T 532395 cagT 6963380 cagT Helicobacter pylori G27 cag pathogenicity island protein T YP_002266119.1 531553 D 563041 CDS YP_002266120.1 208434454 6963381 complement(532592..533191) 1 NC_011333.1 cag pathogenicity island protein S 533191 cagS 6963381 cagS Helicobacter pylori G27 cag pathogenicity island protein S YP_002266120.1 532592 R 563041 CDS YP_002266121.1 208434455 6963382 complement(535518..535823) 1 NC_011333.1 cag pathogenicity island protein Q 535823 cagQ 6963382 cagQ Helicobacter pylori G27 cag pathogenicity island protein Q YP_002266121.1 535518 R 563041 CDS YP_002266122.1 208434456 6963383 complement(535835..536014) 1 NC_011333.1 hypothetical protein 536014 6963383 HPG27_494 Helicobacter pylori G27 hypothetical protein YP_002266122.1 535835 R 563041 CDS YP_002266123.1 208434457 6963384 537100..538230 1 NC_011333.1 cag pathogenicity island protein M 538230 cagM 6963384 cagM Helicobacter pylori G27 cag pathogenicity island protein M YP_002266123.1 537100 D 563041 CDS YP_002266124.1 208434458 6963385 538245..539165 1 NC_011333.1 cag pathogenicity island protein N 539165 cagN 6963385 cagN Helicobacter pylori G27 cag pathogenicity island protein N YP_002266124.1 538245 D 563041 CDS YP_002266125.1 208434459 6963386 complement(539247..539960) 1 NC_011333.1 cag pathogenicity island protein L 539960 cagL 6963386 cagL Helicobacter pylori G27 cag pathogenicity island protein L YP_002266125.1 539247 R 563041 CDS YP_002266126.1 208434460 6963387 complement(539957..541033) 1 NC_011333.1 cag pathogenicity island protein I 541033 cagI 6963387 cagI Helicobacter pylori G27 cag pathogenicity island protein I YP_002266126.1 539957 R 563041 CDS YP_002266127.1 208434462 6963388 complement(541113..542045) 1 NC_011333.1 cag pathogenicity island protein H 542045 cagH 6963388 cagH Helicobacter pylori G27 cag pathogenicity island protein H YP_002266127.1 541113 R 563041 CDS YP_002266128.1 208434461 6963390 542044..542244 1 NC_011333.1 hypothetical protein 542244 6963390 HPG27_500 Helicobacter pylori G27 hypothetical protein YP_002266128.1 542044 D 563041 CDS YP_002266129.1 208434463 6963389 complement(542241..542669) 1 NC_011333.1 cag pathogenicity island protein G 542669 cagG 6963389 cagG Helicobacter pylori G27 cag pathogenicity island protein G YP_002266129.1 542241 R 563041 CDS YP_002266130.1 208434464 6963391 complement(542724..543530) 1 NC_011333.1 cag pathogenicity island protein F 543530 cagF 6963391 cagF Helicobacter pylori G27 cag pathogenicity island protein F YP_002266130.1 542724 R 563041 CDS YP_002266131.1 208434465 6963392 complement(543532..546483) 1 NC_011333.1 cag pathogenicity island protein E 546483 cagE 6963392 cagE Helicobacter pylori G27 cag pathogenicity island protein E YP_002266131.1 543532 R 563041 CDS YP_002266132.1 208434466 6963393 complement(546492..547115) 1 NC_011333.1 cag pathogenicity island protein D 547115 cagD 6963393 cagD Helicobacter pylori G27 cag pathogenicity island protein D YP_002266132.1 546492 R 563041 CDS YP_002266133.1 208434467 6963394 complement(547117..547464) 1 NC_011333.1 cag pathogenicity island protein C 547464 cagC 6963394 cagC Helicobacter pylori G27 cag pathogenicity island protein C YP_002266133.1 547117 R 563041 CDS YP_002266134.1 208434468 6963395 complement(547609..547836) 1 NC_011333.1 cag pathogenicity island protein B 547836 cagB 6963395 cagB Helicobacter pylori G27 cag pathogenicity island protein B YP_002266134.1 547609 R 563041 CDS YP_002266135.1 208434469 6963396 548263..551955 1 NC_011333.1 cytotoxin-associated protein A 551955 cagA 6963396 cagA Helicobacter pylori G27 cytotoxin-associated protein A YP_002266135.1 548263 D 563041 CDS YP_002266136.1 208434470 6963397 552282..552584 1 NC_011333.1 hypothetical protein 552584 6963397 HPG27_508 Helicobacter pylori G27 hypothetical protein YP_002266136.1 552282 D 563041 CDS YP_002266137.1 208434471 6963398 complement(552642..553409) 1 NC_011333.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 553409 6963398 HPG27_509 Helicobacter pylori G27 glutamate racemase YP_002266137.1 552642 R 563041 CDS YP_002266138.1 208434472 6963399 complement(553446..554762) 1 NC_011333.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 554762 rho 6963399 rho Helicobacter pylori G27 transcription termination factor Rho YP_002266138.1 553446 R 563041 CDS YP_002266139.1 208434473 6963400 555028..555231 1 NC_011333.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 555231 rpmE 6963400 rpmE Helicobacter pylori G27 50S ribosomal protein L31 YP_002266139.1 555028 D 563041 CDS YP_002266140.1 208434474 6963402 556157..556813 1 NC_011333.1 23S rRNA methyltransferase 556813 6963402 HPG27_513 Helicobacter pylori G27 23S rRNA methyltransferase YP_002266140.1 556157 D 563041 CDS YP_002266141.1 208434475 6963403 556826..557791 1 NC_011333.1 hypothetical protein 557791 6963403 HPG27_514 Helicobacter pylori G27 hypothetical protein YP_002266141.1 556826 D 563041 CDS YP_002266142.1 208434476 6963404 557869..558609 1 NC_011333.1 hypothetical protein 558609 6963404 HPG27_515 Helicobacter pylori G27 hypothetical protein YP_002266142.1 557869 D 563041 CDS YP_002266143.1 208434477 6963405 complement(558678..559115) 1 NC_011333.1 hypothetical protein 559115 6963405 HPG27_516 Helicobacter pylori G27 hypothetical protein YP_002266143.1 558678 R 563041 CDS YP_002266144.1 208434478 6963406 complement(559583..560521) 1 NC_011333.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 560521 6963406 HPG27_517 Helicobacter pylori G27 acetyl-CoA carboxylase carboxyltransferase subunit alpha YP_002266144.1 559583 R 563041 CDS YP_002266145.1 208434479 6963407 complement(560544..561758) 1 NC_011333.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-(acyl carrier protein) synthase II 561758 6963407 HPG27_518 Helicobacter pylori G27 3-oxoacyl-(acyl carrier protein) synthase II YP_002266145.1 560544 R 563041 CDS YP_002266146.1 208434480 6963408 complement(562089..562325) 1 NC_011333.1 carries the fatty acid chain in fatty acid biosynthesis; acyl carrier protein 562325 acpP 6963408 acpP Helicobacter pylori G27 acyl carrier protein YP_002266146.1 562089 R 563041 CDS YP_002266147.1 208434481 6963409 complement(562555..563301) 1 NC_011333.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-(acyl-carrier-protein) reductase 563301 fabG 6963409 fabG Helicobacter pylori G27 3-ketoacyl-(acyl-carrier-protein) reductase YP_002266147.1 562555 R 563041 CDS YP_002266148.1 208434482 6963410 complement(563340..563552) 1 NC_011333.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 563552 rpsU 6963410 rpsU Helicobacter pylori G27 30S ribosomal protein S21 YP_002266148.1 563340 R 563041 CDS YP_002266149.1 208434483 6963411 complement(563653..564903) 1 NC_011333.1 hypothetical protein 564903 6963411 HPG27_522 Helicobacter pylori G27 hypothetical protein YP_002266149.1 563653 R 563041 CDS YP_002266150.1 208434484 6963412 565075..565320 1 NC_011333.1 hypothetical protein 565320 6963412 HPG27_523 Helicobacter pylori G27 hypothetical protein YP_002266150.1 565075 D 563041 CDS YP_002266151.1 208434485 6963413 complement(565343..565990) 1 NC_011333.1 hypothetical protein 565990 6963413 HPG27_524 Helicobacter pylori G27 hypothetical protein YP_002266151.1 565343 R 563041 CDS YP_002266152.1 208434486 6963414 complement(566097..566915) 1 NC_011333.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 566915 dapF 6963414 dapF Helicobacter pylori G27 diaminopimelate epimerase YP_002266152.1 566097 R 563041 CDS YP_002266153.1 208434487 6963415 567031..568077 1 NC_011333.1 membrane protein 568077 6963415 HPG27_526 Helicobacter pylori G27 membrane protein YP_002266153.1 567031 D 563041 CDS YP_002266154.1 208434488 6963416 complement(568209..569081) 1 NC_011333.1 hypothetical protein 569081 6963416 HPG27_527 Helicobacter pylori G27 hypothetical protein YP_002266154.1 568209 R 563041 CDS YP_002266155.1 208434489 6963417 complement(569120..570220) 1 NC_011333.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 570220 6963417 HPG27_528 Helicobacter pylori G27 GTP-dependent nucleic acid-binding protein EngD YP_002266155.1 569120 R 563041 CDS YP_002266156.1 208434490 6963418 complement(570222..571712) 1 NC_011333.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 571712 6963418 HPG27_529 Helicobacter pylori G27 leucyl aminopeptidase YP_002266156.1 570222 R 563041 CDS YP_002266157.1 208434491 6963419 complement(571760..572338) 1 NC_011333.1 hypothetical protein 572338 6963419 HPG27_530 Helicobacter pylori G27 hypothetical protein YP_002266157.1 571760 R 563041 CDS YP_002266158.1 208434492 6963420 complement(572353..572892) 1 NC_011333.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 572892 6963420 HPG27_531 Helicobacter pylori G27 adenine phosphoribosyltransferase YP_002266158.1 572353 R 563041 CDS YP_002266159.1 208434493 6963421 complement(572950..573282) 1 NC_011333.1 hypothetical protein 573282 6963421 HPG27_532 Helicobacter pylori G27 hypothetical protein YP_002266159.1 572950 R 563041 CDS YP_002266160.1 208434494 6963422 complement(573327..573788) 1 NC_011333.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 573788 6963422 HPG27_533 Helicobacter pylori G27 ribose-5-phosphate isomerase B YP_002266160.1 573327 R 563041 CDS YP_002266161.1 208434495 6963423 complement(573809..574507) 1 NC_011333.1 hypothetical protein 574507 6963423 HPG27_534 Helicobacter pylori G27 hypothetical protein YP_002266161.1 573809 R 563041 CDS YP_002266162.1 208434496 6963424 complement(574516..575388) 1 NC_011333.1 signal peptidase I 575388 lepB 6963424 lepB Helicobacter pylori G27 signal peptidase I YP_002266162.1 574516 R 563041 CDS YP_002266163.1 208434497 6963425 complement(575388..576260) 1 NC_011333.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 576260 6963425 HPG27_536 Helicobacter pylori G27 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase YP_002266163.1 575388 R 563041 CDS YP_002266164.1 208434498 6963426 complement(576339..578384) 1 NC_011333.1 hypothetical protein 578384 6963426 HPG27_537 Helicobacter pylori G27 hypothetical protein YP_002266164.1 576339 R 563041 CDS YP_002266165.1 208434499 6963427 complement(578390..578944) 1 NC_011333.1 hypothetical protein 578944 6963427 HPG27_538 Helicobacter pylori G27 hypothetical protein YP_002266165.1 578390 R 563041 CDS YP_002266166.1 208434500 6963428 complement(578951..580027) 1 NC_011333.1 hypothetical protein 580027 6963428 HPG27_539 Helicobacter pylori G27 hypothetical protein YP_002266166.1 578951 R 563041 CDS YP_002266167.1 208434501 6963429 complement(580045..581064) 1 NC_011333.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 581064 6963429 HPG27_540 Helicobacter pylori G27 dihydroorotase YP_002266167.1 580045 R 563041 CDS YP_002266168.1 208434502 6963431 complement(582017..582913) 1 NC_011333.1 hypothetical protein 582913 6963431 HPG27_542 Helicobacter pylori G27 hypothetical protein YP_002266168.1 582017 R 563041 CDS YP_002266169.1 208434503 6963432 complement(582910..583281) 1 NC_011333.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 583281 fliY-2 6963432 fliY-2 Helicobacter pylori G27 flagellar motor switch protein YP_002266169.1 582910 R 563041 CDS YP_002266170.1 208434504 6963433 complement(583363..584019) 1 NC_011333.1 endonuclease III 584019 6963433 HPG27_544 Helicobacter pylori G27 endonuclease III YP_002266170.1 583363 R 563041 CDS YP_002266171.1 208434505 6963434 complement(584016..584246) 1 NC_011333.1 hypothetical protein 584246 6963434 HPG27_545 Helicobacter pylori G27 hypothetical protein YP_002266171.1 584016 R 563041 CDS YP_002266172.1 208434506 6963435 complement(584248..587181) 1 NC_011333.1 hypothetical protein 587181 6963435 HPG27_546 Helicobacter pylori G27 hypothetical protein YP_002266172.1 584248 R 563041 CDS YP_002266173.1 208434507 6963436 587225..588088 1 NC_011333.1 amino deoxy chorismate lyase 588088 6963436 HPG27_547 Helicobacter pylori G27 amino deoxy chorismate lyase YP_002266173.1 587225 D 563041 CDS YP_002266174.1 208434508 6963437 588273..588614 1 NC_011333.1 2-oxoglutarate-acceptor oxidoreductase subunit OorD 588614 oorD 6963437 oorD Helicobacter pylori G27 2-oxoglutarate-acceptor oxidoreductase subunit OorD YP_002266174.1 588273 D 563041 CDS YP_002266175.1 208434509 6963438 588614..589741 1 NC_011333.1 2-oxoglutarate-acceptor oxidoreductase subunit OorA 589741 oorA 6963438 oorA Helicobacter pylori G27 2-oxoglutarate-acceptor oxidoreductase subunit OorA YP_002266175.1 588614 D 563041 CDS YP_002266176.1 208434510 6963439 589744..590565 1 NC_011333.1 2-oxoglutarate-acceptor oxidoreductase subunit OorB 590565 oorB 6963439 oorB Helicobacter pylori G27 2-oxoglutarate-acceptor oxidoreductase subunit OorB YP_002266176.1 589744 D 563041 CDS YP_002266177.1 208434511 6963440 590565..591125 1 NC_011333.1 2-oxoglutarate-acceptor oxidoreductase subunit OorC 591125 oorC 6963440 oorC Helicobacter pylori G27 2-oxoglutarate-acceptor oxidoreductase subunit OorC YP_002266177.1 590565 D 563041 CDS YP_002266178.1 208434512 6963441 591285..594227 1 NC_011333.1 type IIIR-M system restriction enzyme 594227 6963441 HPG27_552 Helicobacter pylori G27 type IIIR-M system restriction enzyme YP_002266178.1 591285 D 563041 CDS YP_002266179.1 208434513 6963442 594224..596098 1 NC_011333.1 type III R-M system modification enzyme 596098 6963442 HPG27_553 Helicobacter pylori G27 type III R-M system modification enzyme YP_002266179.1 594224 D 563041 CDS YP_002266180.1 208434514 6963443 596206..596370 1 NC_011333.1 hypothetical protein 596370 6963443 HPG27_554 Helicobacter pylori G27 hypothetical protein YP_002266180.1 596206 D 563041 CDS YP_002266181.1 208434515 6963444 596379..597851 1 NC_011333.1 DsbB-like protein 597851 6963444 HPG27_555 Helicobacter pylori G27 DsbB-like protein YP_002266181.1 596379 D 563041 CDS YP_002266182.1 208434516 6963445 598266..598904 1 NC_011333.1 Tip-alpha; forms a dimer; found in culture supernatant; induces TNF-alpha and NF-kappa-B in cell cultures of mouse cells; tumor necrosis factor alpha-inducing protein 598904 6963445 HPG27_556 Helicobacter pylori G27 tumor necrosis factor alpha-inducing protein YP_002266182.1 598266 D 563041 CDS YP_002266183.1 208434517 6963446 complement(598907..600889) 1 NC_011333.1 penicillin-binding protein 1A 600889 6963446 HPG27_557 Helicobacter pylori G27 penicillin-binding protein 1A YP_002266183.1 598907 R 563041 CDS YP_002266184.1 208434518 6963447 complement(600890..602038) 1 NC_011333.1 8-amino-7-oxononanoate synthase 602038 bioF 6963447 bioF Helicobacter pylori G27 8-amino-7-oxononanoate synthase YP_002266184.1 600890 R 563041 CDS YP_002266185.1 208434519 6963448 complement(602035..603336) 1 NC_011333.1 methyl-accepting chemotaxis protein 603336 tlpD 6963448 tlpD Helicobacter pylori G27 methyl-accepting chemotaxis protein YP_002266185.1 602035 R 563041 CDS YP_002266186.1 208434520 6963449 complement(603408..604355) 1 NC_011333.1 multi drug resistance protein 604355 6963449 HPG27_560 Helicobacter pylori G27 multi drug resistance protein YP_002266186.1 603408 R 563041 CDS YP_002266187.1 208434521 6963450 complement(604396..605190) 1 NC_011333.1 hypothetical protein 605190 6963450 HPG27_561 Helicobacter pylori G27 hypothetical protein YP_002266187.1 604396 R 563041 CDS YP_002266188.1 208434522 6963451 605351..606883 1 NC_011333.1 FlaA; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin A 606883 flaA 6963451 flaA Helicobacter pylori G27 flagellin A YP_002266188.1 605351 D 563041 CDS YP_002266189.1 208434523 6963452 607011..607667 1 NC_011333.1 3-methyladenine DNA glycosylase 607667 6963452 HPG27_563 Helicobacter pylori G27 3-methyladenine DNA glycosylase YP_002266189.1 607011 D 563041 CDS YP_002266190.1 208434524 6963453 607664..608281 1 NC_011333.1 hypothetical protein 608281 6963453 HPG27_564 Helicobacter pylori G27 hypothetical protein YP_002266190.1 607664 D 563041 CDS YP_002266191.1 208434525 6963454 608350..609369 1 NC_011333.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 609369 hemE 6963454 hemE Helicobacter pylori G27 uroporphyrinogen decarboxylase YP_002266191.1 608350 D 563041 CDS YP_002266192.1 208434526 6963455 609379..610812 1 NC_011333.1 outer-membrane protein of the hefABC efflux system 610812 hefA 6963455 hefA Helicobacter pylori G27 outer-membrane protein of the hefABC efflux system YP_002266192.1 609379 D 563041 CDS YP_002266193.1 208434527 6963456 610822..611526 1 NC_011333.1 membrane fusion protein of the hefABC efflux system 611526 hefB 6963456 hefB Helicobacter pylori G27 membrane fusion protein of the hefABC efflux system YP_002266193.1 610822 D 563041 CDS YP_002266194.1 208434528 6963457 611539..614625 1 NC_011333.1 cytoplasmic pump protein of the hefABC efflux system 614625 hefC 6963457 hefC Helicobacter pylori G27 cytoplasmic pump protein of the hefABC efflux system YP_002266194.1 611539 D 563041 CDS YP_002266195.1 208434529 6963458 614622..615191 1 NC_011333.1 hypothetical protein 615191 6963458 HPG27_569 Helicobacter pylori G27 hypothetical protein YP_002266195.1 614622 D 563041 CDS YP_002266196.1 208434530 6963459 615343..624921 1 NC_011333.1 putative vacuolating cytotoxin(VacA)-like protein 624921 6963459 HPG27_570 Helicobacter pylori G27 putative vacuolating cytotoxin(VacA)-like protein YP_002266196.1 615343 D 563041 CDS YP_002266197.1 208434531 6963460 complement(624980..625480) 1 NC_011333.1 ABC transporter permease 625480 6963460 HPG27_571 Helicobacter pylori G27 ABC transporter permease YP_002266197.1 624980 R 563041 CDS YP_002266198.1 208434532 6963461 complement(625497..625736) 1 NC_011333.1 ABC transporter permease 625736 6963461 HPG27_572 Helicobacter pylori G27 ABC transporter permease YP_002266198.1 625497 R 563041 CDS YP_002266199.1 208434533 6963462 complement(625736..626437) 1 NC_011333.1 ABC transporter ABC transporter ATP-binding protein 626437 6963462 HPG27_573 Helicobacter pylori G27 ABC transporter ABC transporter ATP-binding protein YP_002266199.1 625736 R 563041 CDS YP_002266200.1 208434534 6963463 complement(626748..627080) 1 NC_011333.1 hypothetical protein 627080 6963463 HPG27_574 Helicobacter pylori G27 hypothetical protein YP_002266200.1 626748 R 563041 CDS YP_002266201.1 208434535 6963464 complement(627181..629157) 1 NC_011333.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 629157 ligA 6963464 ligA Helicobacter pylori G27 NAD-dependent DNA ligase LigA YP_002266201.1 627181 R 563041 CDS YP_002266202.1 208434536 6963465 629236..630177 1 NC_011333.1 chemotaxis protein 630177 cheV2 6963465 cheV2 Helicobacter pylori G27 chemotaxis protein YP_002266202.1 629236 D 563041 CDS YP_002266203.1 208434537 6963466 630212..631945 1 NC_011333.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 631945 aspS 6963466 aspS Helicobacter pylori G27 aspartyl-tRNA synthetase YP_002266203.1 630212 D 563041 CDS YP_002266204.1 208434538 6963467 631962..632537 1 NC_011333.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 632537 adk 6963467 adk Helicobacter pylori G27 adenylate kinase YP_002266204.1 631962 D 563041 CDS YP_002266205.1 208434539 6963468 632562..633122 1 NC_011333.1 putative lipopolysaccharide biosynthesis protein 633122 6963468 HPG27_579 Helicobacter pylori G27 putative lipopolysaccharide biosynthesis protein YP_002266205.1 632562 D 563041 CDS YP_002266206.1 208434540 6963469 633193..633825 1 NC_011333.1 putative lipopolysaccharide biosynthesis protein 633825 6963469 HPG27_580 Helicobacter pylori G27 putative lipopolysaccharide biosynthesis protein YP_002266206.1 633193 D 563041 CDS YP_002266207.1 208434541 6963470 633877..634398 1 NC_011333.1 catalyzes the hydrolysis of pyrophosphate to phosphate; inorganic pyrophosphatase 634398 6963470 HPG27_581 Helicobacter pylori G27 inorganic pyrophosphatase YP_002266207.1 633877 D 563041 CDS YP_002266208.1 208434542 6963471 complement(634540..636636) 1 NC_011333.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 636636 mutS2 6963471 mutS2 Helicobacter pylori G27 recombination and DNA strand exchange inhibitor protein YP_002266208.1 634540 R 563041 CDS YP_002266209.1 208434543 6963472 complement(636788..637168) 1 NC_011333.1 hypothetical protein 637168 6963472 HPG27_583 Helicobacter pylori G27 hypothetical protein YP_002266209.1 636788 R 563041 CDS YP_002266210.1 208434544 6963473 complement(637168..638430) 1 NC_011333.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 638430 murC 6963473 murC Helicobacter pylori G27 UDP-N-acetylmuramate--L-alanine ligase YP_002266210.1 637168 R 563041 CDS YP_002266211.1 208434545 6963474 complement(638510..639637) 1 NC_011333.1 hypothetical protein 639637 6963474 HPG27_585 Helicobacter pylori G27 hypothetical protein YP_002266211.1 638510 R 563041 CDS YP_002266212.1 208434546 6963475 639757..640836 1 NC_011333.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 640836 ispG 6963475 ispG Helicobacter pylori G27 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_002266212.1 639757 D 563041 CDS YP_002266213.1 208434547 6963476 640839..642044 1 NC_011333.1 tetra hydro dipicolinateN-succinyl transferase 642044 6963476 HPG27_587 Helicobacter pylori G27 tetra hydro dipicolinateN-succinyl transferase YP_002266213.1 640839 D 563041 CDS YP_002266214.1 208434548 6963477 642056..643114 1 NC_011333.1 cysteine-rich protein F 643114 6963477 HPG27_588 Helicobacter pylori G27 cysteine-rich protein F YP_002266214.1 642056 D 563041 CDS YP_002266215.1 208434549 6963478 643197..643364 1 NC_011333.1 hypothetical protein 643364 6963478 HPG27_589 Helicobacter pylori G27 hypothetical protein YP_002266215.1 643197 D 563041 CDS YP_002266216.1 208434550 6963479 643498..645384 1 NC_011333.1 hypothetical protein 645384 6963479 HPG27_590 Helicobacter pylori G27 hypothetical protein YP_002266216.1 643498 D 563041 CDS YP_002266217.1 208434551 6963480 complement(645428..646012) 1 NC_011333.1 modulator of drug activity 646012 6963480 HPG27_591 Helicobacter pylori G27 modulator of drug activity YP_002266217.1 645428 R 563041 CDS YP_002266218.1 208434552 6963481 646172..647326 1 NC_011333.1 quinone-reactive Ni/Fe hydrogenase 647326 hydA 6963481 hydA Helicobacter pylori G27 quinone-reactive Ni/Fe hydrogenase YP_002266218.1 646172 D 563041 CDS YP_002266219.1 208434553 6963482 647336..649072 1 NC_011333.1 quinone-reactive Ni/Fe hydrogenase 649072 hydB 6963482 hydB Helicobacter pylori G27 quinone-reactive Ni/Fe hydrogenase YP_002266219.1 647336 D 563041 CDS YP_002266220.1 208434554 6963483 649085..649759 1 NC_011333.1 quinone-reactive Ni/Fe hydrogenase 649759 hydC 6963483 hydC Helicobacter pylori G27 quinone-reactive Ni/Fe hydrogenase YP_002266220.1 649085 D 563041 CDS YP_002266221.1 208434555 6963484 649756..650292 1 NC_011333.1 quinone-reactive Ni/Fe hydrogenase 650292 hydD 6963484 hydD Helicobacter pylori G27 quinone-reactive Ni/Fe hydrogenase YP_002266221.1 649756 D 563041 CDS YP_002266222.1 208434556 6963485 650294..651832 1 NC_011333.1 hypothetical protein 651832 hydE 6963485 hydE Helicobacter pylori G27 hypothetical protein YP_002266222.1 650294 D 563041 CDS YP_002266223.1 208434557 6963486 complement(651837..652193) 1 NC_011333.1 hypothetical protein 652193 6963486 HPG27_597 Helicobacter pylori G27 hypothetical protein YP_002266223.1 651837 R 563041 CDS YP_002266224.1 208434558 6963487 complement(652268..652720) 1 NC_011333.1 hypothetical protein 652720 6963487 HPG27_598 Helicobacter pylori G27 hypothetical protein YP_002266224.1 652268 R 563041 CDS YP_002266225.1 208434559 6963488 652914..653837 1 NC_011333.1 outer membrane protein 653837 hopH 6963488 hopH Helicobacter pylori G27 outer membrane protein YP_002266225.1 652914 D 563041 CDS YP_002266226.1 208434560 6963489 complement(653883..654563) 1 NC_011333.1 ExsB trans-regulatory protein 654563 6963489 HPG27_600 Helicobacter pylori G27 ExsB trans-regulatory protein YP_002266226.1 653883 R 563041 CDS YP_002266227.1 208434561 6963490 654626..655834 1 NC_011333.1 poly(A) polymerase 655834 6963490 HPG27_601 Helicobacter pylori G27 poly(A) polymerase YP_002266227.1 654626 D 563041 CDS YP_002266228.1 208434562 6963491 655848..656351 1 NC_011333.1 hypothetical protein 656351 6963491 HPG27_602 Helicobacter pylori G27 hypothetical protein YP_002266228.1 655848 D 563041 CDS YP_002266229.1 208434563 6963492 656366..657223 1 NC_011333.1 putative 3-hydroxy acid dehydrogenase 657223 6963492 HPG27_603 Helicobacter pylori G27 putative 3-hydroxy acid dehydrogenase YP_002266229.1 656366 D 563041 CDS YP_002266230.1 208434564 6963493 657244..657876 1 NC_011333.1 NAD(P)H-flavinoxido reductase 657876 6963493 HPG27_604 Helicobacter pylori G27 NAD(P)H-flavinoxido reductase YP_002266230.1 657244 D 563041 CDS YP_002266231.1 208434565 6963494 658041..659360 1 NC_011333.1 charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase 659360 6963494 HPG27_605 Helicobacter pylori G27 glutamylglutaminyl-tRNA synthetase YP_002266231.1 658041 D 563041 CDS YP_002266232.1 208434566 6963495 659357..659650 1 NC_011333.1 hypothetical protein 659650 6963495 HPG27_606 Helicobacter pylori G27 hypothetical protein YP_002266232.1 659357 D 563041 CDS YP_002266233.1 208434567 6963496 659664..661346 1 NC_011333.1 soluble lytic murein transglycosylase 661346 6963496 HPG27_607 Helicobacter pylori G27 soluble lytic murein transglycosylase YP_002266233.1 659664 D 563041 CDS YP_002266234.1 208434568 6963497 661343..662164 1 NC_011333.1 UDP-glucosepyrophosphorylase 662164 6963497 HPG27_608 Helicobacter pylori G27 UDP-glucosepyrophosphorylase YP_002266234.1 661343 D 563041 CDS YP_002266235.1 208434569 6963498 662176..662583 1 NC_011333.1 hypothetical protein 662583 6963498 HPG27_609 Helicobacter pylori G27 hypothetical protein YP_002266235.1 662176 D 563041 CDS YP_002266236.1 208434570 6963499 662586..663854 1 NC_011333.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 663854 6963499 HPG27_610 Helicobacter pylori G27 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_002266236.1 662586 D 563041 CDS YP_002266237.1 208434571 6963500 663912..665318 1 NC_011333.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 665318 aspA 6963500 aspA Helicobacter pylori G27 aspartate ammonia-lyase YP_002266237.1 663912 D 563041 CDS YP_002266238.1 208434572 6963501 665363..665953 1 NC_011333.1 hypothetical protein 665953 6963501 HPG27_612 Helicobacter pylori G27 hypothetical protein YP_002266238.1 665363 D 563041 CDS YP_002266239.1 208434573 6963502 complement(665962..667350) 1 NC_011333.1 alpha1,3-fucosyl transferase 667350 6963502 HPG27_613 Helicobacter pylori G27 alpha1,3-fucosyl transferase YP_002266239.1 665962 R 563041 CDS YP_002266240.1 208434574 6963503 complement(667389..668012) 1 NC_011333.1 phospho serine phosphatase 668012 6963503 HPG27_614 Helicobacter pylori G27 phospho serine phosphatase YP_002266240.1 667389 R 563041 CDS YP_002266241.1 208434575 6963504 complement(668028..668531) 1 NC_011333.1 non heme iron-containing ferritin 668531 6963504 HPG27_615 Helicobacter pylori G27 non heme iron-containing ferritin YP_002266241.1 668028 R 563041 CDS YP_002266242.1 208434576 6963505 668828..669910 1 NC_011333.1 hypothetical protein 669910 6963505 HPG27_616 Helicobacter pylori G27 hypothetical protein YP_002266242.1 668828 D 563041 CDS YP_002266243.1 208434577 6963506 670032..672743 1 NC_011333.1 protective surface antigen D15 672743 6963506 HPG27_617 Helicobacter pylori G27 protective surface antigen D15 YP_002266243.1 670032 D 563041 CDS YP_002266244.1 208434578 6963507 672745..673806 1 NC_011333.1 hypothetical protein 673806 6963507 HPG27_618 Helicobacter pylori G27 hypothetical protein YP_002266244.1 672745 D 563041 CDS YP_002266245.1 208434579 6963508 673812..675116 1 NC_011333.1 processing protease 675116 6963508 HPG27_619 Helicobacter pylori G27 processing protease YP_002266245.1 673812 D 563041 CDS YP_002266246.1 208434580 6963509 675116..676540 1 NC_011333.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 676540 gatB 6963509 gatB Helicobacter pylori G27 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_002266246.1 675116 D 563041 CDS YP_002266247.1 208434581 6963510 676540..677787 1 NC_011333.1 hypothetical protein 677787 6963510 HPG27_621 Helicobacter pylori G27 hypothetical protein YP_002266247.1 676540 D 563041 CDS YP_002266248.1 208434582 6963511 677799..678815 1 NC_011333.1 hypothetical protein 678815 6963511 HPG27_622 Helicobacter pylori G27 hypothetical protein YP_002266248.1 677799 D 563041 CDS YP_002266249.1 208434583 6963512 678937..679233 1 NC_011333.1 ribonuclease H 679233 6963512 HPG27_623 Helicobacter pylori G27 ribonuclease H YP_002266249.1 678937 D 563041 CDS YP_002266250.1 208434584 6963513 679245..679964 1 NC_011333.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 679964 rnc 6963513 rnc Helicobacter pylori G27 ribonuclease III YP_002266250.1 679245 D 563041 CDS YP_002266251.1 208434585 6963514 679961..681058 1 NC_011333.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 681058 6963514 HPG27_625 Helicobacter pylori G27 chorismate synthase YP_002266251.1 679961 D 563041 CDS YP_002266252.1 208434586 6963515 681096..681611 1 NC_011333.1 hypothetical protein 681611 6963515 HPG27_626 Helicobacter pylori G27 hypothetical protein YP_002266252.1 681096 D 563041 CDS YP_002266253.1 208434587 6963516 681611..682984 1 NC_011333.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 682984 6963516 HPG27_627 Helicobacter pylori G27 coproporphyrinogen III oxidase YP_002266253.1 681611 D 563041 CDS YP_002266254.1 208434588 6963517 682981..684282 1 NC_011333.1 glycerol-3-phosphate dehydrogenase 684282 6963517 HPG27_628 Helicobacter pylori G27 glycerol-3-phosphate dehydrogenase YP_002266254.1 682981 D 563041 CDS YP_002266255.1 208434589 6963519 686461..689124 1 NC_011333.1 hypothetical protein 689124 6963519 HPG27_630 Helicobacter pylori G27 hypothetical protein YP_002266255.1 686461 D 563041 CDS YP_002266256.1 208434590 6963520 689366..690178 1 NC_011333.1 outer membrane protein 690178 horF 6963520 horF Helicobacter pylori G27 outer membrane protein YP_002266256.1 689366 D 563041 CDS YP_002266257.1 208434591 6963521 690337..691509 1 NC_011333.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 691509 6963521 HPG27_632 Helicobacter pylori G27 aspartate aminotransferase YP_002266257.1 690337 D 563041 CDS YP_002266258.1 208434592 6963522 691653..691982 1 NC_011333.1 hypothetical protein 691982 6963522 HPG27_633 Helicobacter pylori G27 hypothetical protein YP_002266258.1 691653 D 563041 CDS YP_002266259.1 208434593 6963523 691989..693080 1 NC_011333.1 integrase-recombinase protein 693080 6963523 HPG27_634 Helicobacter pylori G27 integrase-recombinase protein YP_002266259.1 691989 D 563041 CDS YP_002266260.1 208434594 6963524 complement(693142..693648) 1 NC_011333.1 methylated-DNA--protein-cysteine methyl transferase 693648 6963524 HPG27_635 Helicobacter pylori G27 methylated-DNA--protein-cysteine methyl transferase YP_002266260.1 693142 R 563041 CDS YP_002266261.1 208434595 6963525 complement(693652..694419) 1 NC_011333.1 hypothetical protein 694419 6963525 HPG27_636 Helicobacter pylori G27 hypothetical protein YP_002266261.1 693652 R 563041 CDS YP_002266262.1 208434596 6963526 complement(694532..695479) 1 NC_011333.1 putative lipopolysaccharide biosynthesis protein 695479 6963526 HPG27_637 Helicobacter pylori G27 putative lipopolysaccharide biosynthesis protein YP_002266262.1 694532 R 563041 CDS YP_002266263.1 208434597 6963527 complement(695541..697907) 1 NC_011333.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 697907 6963527 HPG27_638 Helicobacter pylori G27 ribonucleotide-diphosphate reductase subunit alpha YP_002266263.1 695541 R 563041 CDS YP_002266264.1 208434598 6963528 complement(698100..698570) 1 NC_011333.1 hypothetical protein 698570 6963528 HPG27_639 Helicobacter pylori G27 hypothetical protein YP_002266264.1 698100 R 563041 CDS YP_002266265.1 208434599 6963529 complement(698594..698881) 1 NC_011333.1 hypothetical protein 698881 6963529 HPG27_640 Helicobacter pylori G27 hypothetical protein YP_002266265.1 698594 R 563041 CDS YP_002266266.1 208434600 6963530 complement(699152..700483) 1 NC_011333.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 700483 glmU 6963530 glmU Helicobacter pylori G27 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_002266266.1 699152 R 563041 CDS YP_002266267.1 208434601 6963531 700499..701281 1 NC_011333.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 701281 fliP 6963531 fliP Helicobacter pylori G27 flagellar biosynthesis protein FliP YP_002266267.1 700499 D 563041 CDS YP_002266268.1 208434602 6963532 complement(701320..703623) 1 NC_011333.1 iron (III) dicitrate transport protein 703623 fecA 6963532 fecA Helicobacter pylori G27 iron (III) dicitrate transport protein YP_002266268.1 701320 R 563041 CDS YP_002266269.1 208434603 6963533 complement(703884..705818) 1 NC_011333.1 iron (II) transport protein 705818 feoB 6963533 feoB Helicobacter pylori G27 iron (II) transport protein YP_002266269.1 703884 R 563041 CDS YP_002266270.1 208434604 6963534 705951..706763 1 NC_011333.1 hypothetical protein 706763 6963534 HPG27_645 Helicobacter pylori G27 hypothetical protein YP_002266270.1 705951 D 563041 CDS YP_002266271.1 208434605 6963535 707044..708219 1 NC_011333.1 acetyl coenzyme A acetyltransferase 708219 6963535 HPG27_646 Helicobacter pylori G27 acetyl coenzyme A acetyltransferase YP_002266271.1 707044 D 563041 CDS YP_002266272.1 208434606 6963536 708230..708928 1 NC_011333.1 succinyl-CoA-transferase subunit A 708928 6963536 HPG27_647 Helicobacter pylori G27 succinyl-CoA-transferase subunit A YP_002266272.1 708230 D 563041 CDS YP_002266273.1 208434607 6963537 708925..709548 1 NC_011333.1 succinyl-CoA-transferase subunit B 709548 6963537 HPG27_648 Helicobacter pylori G27 succinyl-CoA-transferase subunit B YP_002266273.1 708925 D 563041 CDS YP_002266274.1 208434608 6963538 709568..710932 1 NC_011333.1 short-chain fatty acids transporter 710932 6963538 HPG27_649 Helicobacter pylori G27 short-chain fatty acids transporter YP_002266274.1 709568 D 563041 CDS YP_002266275.1 208434609 6963539 711060..712070 1 NC_011333.1 putative outer membrane protein 712070 6963539 HPG27_650 Helicobacter pylori G27 putative outer membrane protein YP_002266275.1 711060 D 563041 CDS YP_002266276.1 208434610 6963541 714441..716738 1 NC_011333.1 N-methyl hydantoinase 716738 6963541 HPG27_652 Helicobacter pylori G27 N-methyl hydantoinase YP_002266276.1 714441 D 563041 CDS YP_002266277.1 208434611 6963542 716755..717255 1 NC_011333.1 acetone carboxylase subunit gamma 717255 6963542 HPG27_653 Helicobacter pylori G27 acetone carboxylase subunit gamma YP_002266277.1 716755 D 563041 CDS YP_002266278.1 208434612 6963543 717454..717645 1 NC_011333.1 hypothetical protein 717645 6963543 HPG27_654 Helicobacter pylori G27 hypothetical protein YP_002266278.1 717454 D 563041 CDS YP_002266279.1 208434613 6963544 717657..718685 1 NC_011333.1 hypothetical protein 718685 6963544 HPG27_655 Helicobacter pylori G27 hypothetical protein YP_002266279.1 717657 D 563041 CDS YP_002266280.1 208434614 6963545 718804..719064 1 NC_011333.1 diacyl glycerol kinase 719064 6963545 HPG27_656 Helicobacter pylori G27 diacyl glycerol kinase YP_002266280.1 718804 D 563041 CDS YP_002266281.1 208434615 6963546 719084..721585 1 NC_011333.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 721585 gyrA 6963546 gyrA Helicobacter pylori G27 DNA gyrase subunit A YP_002266281.1 719084 D 563041 CDS YP_002266282.1 208434616 6963547 721636..722058 1 NC_011333.1 hypothetical protein 722058 6963547 HPG27_658 Helicobacter pylori G27 hypothetical protein YP_002266282.1 721636 D 563041 CDS YP_002266283.1 208434617 6963548 722055..723200 1 NC_011333.1 transcriptional activator of flagella proteins 723200 6963548 HPG27_659 Helicobacter pylori G27 transcriptional activator of flagella proteins YP_002266283.1 722055 D 563041 CDS YP_002266284.1 208434618 6963549 723373..723639 1 NC_011333.1 hypothetical protein 723639 6963549 HPG27_660 Helicobacter pylori G27 hypothetical protein YP_002266284.1 723373 D 563041 CDS YP_002266285.1 208434619 6963550 723733..724116 1 NC_011333.1 hypothetical protein 724116 6963550 HPG27_661 Helicobacter pylori G27 hypothetical protein YP_002266285.1 723733 D 563041 CDS YP_002266286.1 208434620 6963552 727514..728335 1 NC_011333.1 outer membrane protein 728335 hopE 6963552 hopE Helicobacter pylori G27 outer membrane protein YP_002266286.1 727514 D 563041 CDS YP_002266287.1 208434621 6963553 728515..729441 1 NC_011333.1 S-adenosyl-methyltransferase MraW 729441 mraW 6963553 mraW Helicobacter pylori G27 S-adenosyl-methyltransferase MraW YP_002266287.1 728515 D 563041 CDS YP_002266288.1 208434622 6963554 729462..729806 1 NC_011333.1 hypothetical protein 729806 6963554 HPG27_665 Helicobacter pylori G27 hypothetical protein YP_002266288.1 729462 D 563041 CDS YP_002266289.1 208434623 6963555 730009..730911 1 NC_011333.1 hypothetical protein 730911 6963555 HPG27_666 Helicobacter pylori G27 hypothetical protein YP_002266289.1 730009 D 563041 CDS YP_002266290.1 208434624 6963557 733359..734579 1 NC_011333.1 hypothetical protein 734579 6963557 HPG27_668 Helicobacter pylori G27 hypothetical protein YP_002266290.1 733359 D 563041 CDS YP_002266291.1 208434625 6963558 734658..735284 1 NC_011333.1 hypothetical protein 735284 6963558 HPG27_669 Helicobacter pylori G27 hypothetical protein YP_002266291.1 734658 D 563041 CDS YP_002266292.1 208434626 6963559 complement(735296..736540) 1 NC_011333.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 736540 rpoN 6963559 rpoN Helicobacter pylori G27 RNA polymerase factor sigma-54 YP_002266292.1 735296 R 563041 CDS YP_002266293.1 208434627 6963560 complement(736543..737265) 1 NC_011333.1 ABC transporter ABC transporter ATP-binding protein 737265 6963560 HPG27_671 Helicobacter pylori G27 ABC transporter ABC transporter ATP-binding protein YP_002266293.1 736543 R 563041 CDS YP_002266294.1 208434628 6963561 complement(737278..737679) 1 NC_011333.1 hypothetical protein 737679 6963561 HPG27_672 Helicobacter pylori G27 hypothetical protein YP_002266294.1 737278 R 563041 CDS YP_002266295.1 208434629 6963563 complement(739467..740099) 1 NC_011333.1 hypothetical protein 740099 6963563 HPG27_674 Helicobacter pylori G27 hypothetical protein YP_002266295.1 739467 R 563041 CDS YP_002266296.1 208434630 6963564 740304..740789 1 NC_011333.1 hypothetical protein 740789 6963564 HPG27_675 Helicobacter pylori G27 hypothetical protein YP_002266296.1 740304 D 563041 CDS YP_002266297.1 208434631 6963565 740818..741279 1 NC_011333.1 hypothetical protein 741279 6963565 HPG27_676 Helicobacter pylori G27 hypothetical protein YP_002266297.1 740818 D 563041 CDS YP_002266298.1 208434632 6963566 741597..743513 1 NC_011333.1 outer membrane protein 743513 sabB 6963566 sabB Helicobacter pylori G27 outer membrane protein YP_002266298.1 741597 D 563041 CDS YP_002266299.1 208434633 6963567 complement(743589..744920) 1 NC_011333.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 744920 6963567 HPG27_678 Helicobacter pylori G27 anaerobic C4-dicarboxylate transporter YP_002266299.1 743589 R 563041 CDS YP_002266300.1 208434634 6963568 744997..746049 1 NC_011333.1 L-asparaginase 746049 6963568 HPG27_679 Helicobacter pylori G27 L-asparaginase YP_002266300.1 744997 D 563041 CDS YP_002266301.1 208434635 6963569 complement(746189..748144) 1 NC_011333.1 outer membrane protein 748144 sabA 6963569 sabA Helicobacter pylori G27 outer membrane protein YP_002266301.1 746189 R 563041 CDS YP_002266302.1 208434636 6963570 complement(748365..749228) 1 NC_011333.1 outer membrane protein 749228 6963570 HPG27_681 Helicobacter pylori G27 outer membrane protein YP_002266302.1 748365 R 563041 CDS YP_002266303.1 208434637 6963571 complement(749252..750238) 1 NC_011333.1 transcriptional regulator 750238 6963571 HPG27_682 Helicobacter pylori G27 transcriptional regulator YP_002266303.1 749252 R 563041 CDS YP_002266304.1 208434638 6963572 complement(750329..751345) 1 NC_011333.1 hypothetical protein 751345 6963572 HPG27_683 Helicobacter pylori G27 hypothetical protein YP_002266304.1 750329 R 563041 CDS YP_002266305.1 208434639 6963573 complement(751381..752415) 1 NC_011333.1 hypothetical protein 752415 6963573 HPG27_684 Helicobacter pylori G27 hypothetical protein YP_002266305.1 751381 R 563041 CDS YP_002266306.1 208434640 6963574 complement(752424..752729) 1 NC_011333.1 hypothetical protein 752729 6963574 HPG27_685 Helicobacter pylori G27 hypothetical protein YP_002266306.1 752424 R 563041 CDS YP_002266307.1 208434641 6963575 complement(752839..753693) 1 NC_011333.1 labile enterotoxin outputA 753693 6963575 HPG27_686 Helicobacter pylori G27 labile enterotoxin outputA YP_002266307.1 752839 R 563041 CDS YP_002266308.1 208434642 6963576 complement(755691..756488) 1 NC_011333.1 labile enterotoxin outputA 756488 6963576 HPG27_687 Helicobacter pylori G27 labile enterotoxin outputA YP_002266308.1 755691 R 563041 CDS YP_002266309.1 208434643 6963577 complement(756485..757141) 1 NC_011333.1 hypothetical protein 757141 6963577 HPG27_688 Helicobacter pylori G27 hypothetical protein YP_002266309.1 756485 R 563041 CDS YP_002266310.1 208434644 6963578 complement(757361..758335) 1 NC_011333.1 hypothetical protein 758335 6963578 HPG27_689 Helicobacter pylori G27 hypothetical protein YP_002266310.1 757361 R 563041 CDS YP_002266311.1 208434645 6963579 complement(758447..759766) 1 NC_011333.1 hypothetical protein 759766 6963579 HPG27_690 Helicobacter pylori G27 hypothetical protein YP_002266311.1 758447 R 563041 CDS YP_002266312.1 208434646 6963580 complement(759768..760229) 1 NC_011333.1 xanthine guanine phosphoribosyl transferase 760229 6963580 HPG27_691 Helicobacter pylori G27 xanthine guanine phosphoribosyl transferase YP_002266312.1 759768 R 563041 CDS YP_002266313.1 208434647 6963581 complement(760238..761392) 1 NC_011333.1 phosphoserine amino transferase 761392 6963581 HPG27_692 Helicobacter pylori G27 phosphoserine amino transferase YP_002266313.1 760238 R 563041 CDS YP_002266314.1 208434648 6963582 761496..761972 1 NC_011333.1 phosphatidyl glycerophosphatase A 761972 6963582 HPG27_693 Helicobacter pylori G27 phosphatidyl glycerophosphatase A YP_002266314.1 761496 D 563041 CDS YP_002266315.1 208434649 6963583 762044..763093 1 NC_011333.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 763093 ddl 6963583 ddl Helicobacter pylori G27 D-alanyl-alanine synthetase A YP_002266315.1 762044 D 563041 CDS YP_002266316.1 208434650 6963584 763093..763818 1 NC_011333.1 2-hydroxy-6-oxohepta-2,4-dienoatehydrolase 763818 6963584 HPG27_695 Helicobacter pylori G27 2-hydroxy-6-oxohepta-2,4-dienoatehydrolase YP_002266316.1 763093 D 563041 CDS YP_002266317.1 208434651 6963585 763874..765286 1 NC_011333.1 UDP-MurNac-pentapeptide presynthetase 765286 6963585 HPG27_696 Helicobacter pylori G27 UDP-MurNac-pentapeptide presynthetase YP_002266317.1 763874 D 563041 CDS YP_002266318.1 208434652 6963586 765290..765781 1 NC_011333.1 histidine triad (HIT) family protein 765781 6963586 HPG27_697 Helicobacter pylori G27 histidine triad (HIT) family protein YP_002266318.1 765290 D 563041 CDS YP_002266319.1 208434653 6963587 765846..766802 1 NC_011333.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 766802 6963587 HPG27_698 Helicobacter pylori G27 ribose-phosphate pyrophosphokinase YP_002266319.1 765846 D 563041 CDS YP_002266320.1 208434654 6963589 complement(766865..767986) 1 NC_011333.1 rod shape-determining protein 767986 6963589 HPG27_699 Helicobacter pylori G27 rod shape-determining protein YP_002266320.1 766865 R 563041 CDS YP_002266321.1 208434655 6963590 complement(768033..768533) 1 NC_011333.1 hypothetical protein 768533 6963590 HPG27_700 Helicobacter pylori G27 hypothetical protein YP_002266321.1 768033 R 563041 CDS YP_002266322.1 208434656 6963591 complement(768530..768814) 1 NC_011333.1 hypothetical protein 768814 6963591 HPG27_701 Helicobacter pylori G27 hypothetical protein YP_002266322.1 768530 R 563041 CDS YP_002266323.1 208434657 6963592 769052..770053 1 NC_011333.1 pseudo uridine synthase D 770053 6963592 HPG27_702 Helicobacter pylori G27 pseudo uridine synthase D YP_002266323.1 769052 D 563041 CDS YP_002266324.1 208434658 6963593 770178..771263 1 NC_011333.1 hypothetical protein 771263 6963593 HPG27_703 Helicobacter pylori G27 hypothetical protein YP_002266324.1 770178 D 563041 CDS YP_002266325.1 208434659 6963594 771274..772455 1 NC_011333.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 772455 trmB 6963594 trmB Helicobacter pylori G27 tRNA (guanine-N(7)-)-methyltransferase YP_002266325.1 771274 D 563041 CDS YP_002266326.1 208434660 6963595 772458..773123 1 NC_011333.1 cell division protein 773123 6963595 HPG27_705 Helicobacter pylori G27 cell division protein YP_002266326.1 772458 D 563041 CDS YP_002266327.1 208434661 6963596 773161..773916 1 NC_011333.1 cell division membrane protein 773916 6963596 HPG27_706 Helicobacter pylori G27 cell division membrane protein YP_002266327.1 773161 D 563041 CDS YP_002266328.1 208434662 6963597 773924..775111 1 NC_011333.1 hypothetical protein 775111 6963597 HPG27_707 Helicobacter pylori G27 hypothetical protein YP_002266328.1 773924 D 563041 CDS YP_002266329.1 208434663 6963598 775204..775563 1 NC_011333.1 possibly involved in flagella export; flagellar protein FlaG 775563 flaG-2 6963598 flaG-2 Helicobacter pylori G27 flagellar protein FlaG YP_002266329.1 775204 D 563041 CDS YP_002266330.1 208434664 6963599 775580..777637 1 NC_011333.1 involved in flagellin assembly; flagellar capping protein 777637 fliD 6963599 fliD Helicobacter pylori G27 flagellar capping protein YP_002266330.1 775580 D 563041 CDS YP_002266331.1 208434665 6963600 777679..778059 1 NC_011333.1 flagellin specific chaperone; flagellar protein FliS 778059 fliS 6963600 fliS Helicobacter pylori G27 flagellar protein FliS YP_002266331.1 777679 D 563041 CDS YP_002266332.1 208434666 6963601 778121..778285 1 NC_011333.1 hypothetical protein 778285 6963601 HPG27_711 Helicobacter pylori G27 hypothetical protein YP_002266332.1 778121 D 563041 CDS YP_002266333.1 208434667 6963602 778339..779013 1 NC_011333.1 molybdopterin biosynthesis protein 779013 6963602 HPG27_712 Helicobacter pylori G27 molybdopterin biosynthesis protein YP_002266333.1 778339 D 563041 CDS YP_002266334.1 208434668 6963603 779165..780043 1 NC_011333.1 carbon-nitrogen hydrolase 780043 6963603 HPG27_713 Helicobacter pylori G27 carbon-nitrogen hydrolase YP_002266334.1 779165 D 563041 CDS YP_002266335.1 208434669 6963604 780170..781483 1 NC_011333.1 hypothetical protein 781483 6963604 HPG27_714 Helicobacter pylori G27 hypothetical protein YP_002266335.1 780170 D 563041 CDS YP_002266336.1 208434670 6963605 781546..782799 1 NC_011333.1 multidrug efflux protein 782799 6963605 HPG27_715 Helicobacter pylori G27 multidrug efflux protein YP_002266336.1 781546 D 563041 CDS YP_002266337.1 208434671 6963606 complement(782800..784245) 1 NC_011333.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 784245 6963606 HPG27_716 Helicobacter pylori G27 phosphodiesterase YP_002266337.1 782800 R 563041 CDS YP_002266338.1 208434672 6963607 complement(784289..784930) 1 NC_011333.1 hypothetical protein 784930 6963607 HPG27_717 Helicobacter pylori G27 hypothetical protein YP_002266338.1 784289 R 563041 CDS YP_002266339.1 208434673 6963608 785055..785612 1 NC_011333.1 hypothetical protein 785612 6963608 HPG27_718 Helicobacter pylori G27 hypothetical protein YP_002266339.1 785055 D 563041 CDS YP_002266340.1 208434674 6963609 785619..786500 1 NC_011333.1 signal recognition particle receptor 786500 6963609 HPG27_719 Helicobacter pylori G27 signal recognition particle receptor YP_002266340.1 785619 D 563041 CDS YP_002266341.1 208434675 6963610 complement(786509..786829) 1 NC_011333.1 hypothetical protein 786829 6963610 HPG27_720 Helicobacter pylori G27 hypothetical protein YP_002266341.1 786509 R 563041 CDS YP_002266342.1 208434676 6963611 complement(786894..787835) 1 NC_011333.1 hypothetical protein 787835 6963611 HPG27_721 Helicobacter pylori G27 hypothetical protein YP_002266342.1 786894 R 563041 CDS YP_002266343.1 208434677 6963612 complement(787865..788155) 1 NC_011333.1 hypothetical protein 788155 6963612 HPG27_722 Helicobacter pylori G27 hypothetical protein YP_002266343.1 787865 R 563041 CDS YP_002266344.1 208434679 6963613 complement(788162..789358) 1 NC_011333.1 hypothetical protein 789358 6963613 HPG27_723 Helicobacter pylori G27 hypothetical protein YP_002266344.1 788162 R 563041 CDS YP_002266345.1 208434678 6963615 789357..789518 1 NC_011333.1 hypothetical protein 789518 6963615 HPG27_724 Helicobacter pylori G27 hypothetical protein YP_002266345.1 789357 D 563041 CDS YP_002266346.1 208434680 6963614 complement(789660..790541) 1 NC_011333.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 790541 moaA 6963614 moaA Helicobacter pylori G27 molybdenum cofactor biosynthesis protein A YP_002266346.1 789660 R 563041 CDS YP_002266347.1 208434681 6963616 790712..791317 1 NC_011333.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A 791317 6963616 HPG27_726 Helicobacter pylori G27 molybdopterin-guanine dinucleotide biosynthesis protein A YP_002266347.1 790712 D 563041 CDS YP_002266348.1 208434682 6963617 791379..792386 1 NC_011333.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 792386 flhB 6963617 flhB Helicobacter pylori G27 flagellar biosynthesis protein FlhB YP_002266348.1 791379 D 563041 CDS YP_002266349.1 208434683 6963618 complement(792476..793213) 1 NC_011333.1 hypothetical protein 793213 6963618 HPG27_728 Helicobacter pylori G27 hypothetical protein YP_002266349.1 792476 R 563041 CDS YP_002266350.1 208434684 6963619 complement(793232..794530) 1 NC_011333.1 N-acetylmuramoyl-L-alanine amidase 794530 6963619 HPG27_729 Helicobacter pylori G27 N-acetylmuramoyl-L-alanine amidase YP_002266350.1 793232 R 563041 CDS YP_002266351.1 208434685 6963620 complement(794537..795628) 1 NC_011333.1 hypothetical protein 795628 6963620 HPG27_730 Helicobacter pylori G27 hypothetical protein YP_002266351.1 794537 R 563041 CDS YP_002266352.1 208434686 6963621 complement(795645..796853) 1 NC_011333.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 796853 6963621 HPG27_731 Helicobacter pylori G27 tyrosyl-tRNA synthetase YP_002266352.1 795645 R 563041 CDS YP_002266353.1 208434687 6963622 complement(796873..799158) 1 NC_011333.1 penta-phosphate guanosine-3'-pyrophosphohydrolase 799158 6963622 HPG27_732 Helicobacter pylori G27 penta-phosphate guanosine-3'-pyrophosphohydrolase YP_002266353.1 796873 R 563041 CDS YP_002266354.1 208434688 6963623 complement(799190..799444) 1 NC_011333.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 799444 rpoZ 6963623 rpoZ Helicobacter pylori G27 DNA-directed RNA polymerase subunit omega YP_002266354.1 799190 R 563041 CDS YP_002266355.1 208434689 6963624 complement(799456..800178) 1 NC_011333.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 800178 pyrH 6963624 pyrH Helicobacter pylori G27 uridylate kinase YP_002266355.1 799456 R 563041 CDS YP_002266356.1 208434690 6963625 complement(800279..800962) 1 NC_011333.1 hypothetical protein 800962 6963625 HPG27_735 Helicobacter pylori G27 hypothetical protein YP_002266356.1 800279 R 563041 CDS YP_002266357.1 208434691 6963626 801092..803650 1 NC_011333.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 803650 6963626 HPG27_736 Helicobacter pylori G27 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_002266357.1 801092 D 563041 CDS YP_002266358.1 208434692 6963627 803731..803997 1 NC_011333.1 hypothetical protein 803997 6963627 HPG27_737 Helicobacter pylori G27 hypothetical protein YP_002266358.1 803731 D 563041 CDS YP_002266359.1 208434693 6963628 804277..805575 1 NC_011333.1 hypothetical protein 805575 6963628 HPG27_738 Helicobacter pylori G27 hypothetical protein YP_002266359.1 804277 D 563041 CDS YP_002266360.1 208434694 6963629 805668..807035 1 NC_011333.1 outer membrane protein 807035 hofE 6963629 hofE Helicobacter pylori G27 outer membrane protein YP_002266360.1 805668 D 563041 CDS YP_002266361.1 208434695 6963630 complement(807042..807569) 1 NC_011333.1 hypothetical protein 807569 6963630 HPG27_740 Helicobacter pylori G27 hypothetical protein YP_002266361.1 807042 R 563041 CDS YP_002266362.1 208434696 6963631 complement(808053..808607) 1 NC_011333.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 808607 lolA 6963631 lolA Helicobacter pylori G27 outer-membrane lipoprotein carrier protein YP_002266362.1 808053 R 563041 CDS YP_002266363.1 208434697 6963632 808753..811350 1 NC_011333.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 811350 6963632 HPG27_742 Helicobacter pylori G27 preprotein translocase subunit SecA YP_002266363.1 808753 D 563041 CDS YP_002266364.1 208434698 6963633 811382..812572 1 NC_011333.1 lipoprotein release system transmembrane protein 812572 6963633 HPG27_743 Helicobacter pylori G27 lipoprotein release system transmembrane protein YP_002266364.1 811382 D 563041 CDS YP_002266365.1 208434699 6963634 812854..814353 1 NC_011333.1 outer membrane protein 814353 hofF 6963634 hofF Helicobacter pylori G27 outer membrane protein YP_002266365.1 812854 D 563041 CDS YP_002266366.1 208434700 6963635 814457..814606 1 NC_011333.1 hypothetical protein 814606 6963635 HPG27_745 Helicobacter pylori G27 hypothetical protein YP_002266366.1 814457 D 563041 CDS YP_002266367.1 208434701 6963636 complement(814589..815893) 1 NC_011333.1 HP0790-like protein 815893 6963636 HPG27_746 Helicobacter pylori G27 HP0790-like protein YP_002266367.1 814589 R 563041 CDS YP_002266368.1 208434702 6963637 complement(815934..817994) 1 NC_011333.1 cadmium-transporting ATPase 817994 6963637 HPG27_747 Helicobacter pylori G27 cadmium-transporting ATPase YP_002266368.1 815934 R 563041 CDS YP_002266369.1 208434703 6963638 complement(818019..819539) 1 NC_011333.1 DNA transformation competence protein 819539 comM 6963638 comM Helicobacter pylori G27 DNA transformation competence protein YP_002266369.1 818019 R 563041 CDS YP_002266370.1 208434704 6963639 complement(819545..820069) 1 NC_011333.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 820069 def 6963639 def Helicobacter pylori G27 peptide deformylase YP_002266370.1 819545 R 563041 CDS YP_002266371.1 208434705 6963640 complement(820074..820661) 1 NC_011333.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 820661 clpP 6963640 clpP Helicobacter pylori G27 ATP-dependent Clp protease proteolytic subunit YP_002266371.1 820074 R 563041 CDS YP_002266372.1 208434706 6963641 complement(820682..822037) 1 NC_011333.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 822037 tig 6963641 tig Helicobacter pylori G27 trigger factor YP_002266372.1 820682 R 563041 CDS YP_002266373.1 208434707 6963642 complement(822144..822980) 1 NC_011333.1 outer membrane protein 822980 horG 6963642 horG Helicobacter pylori G27 outer membrane protein YP_002266373.1 822144 R 563041 CDS YP_002266374.1 208434708 6963643 complement(823009..823791) 1 NC_011333.1 flagellar sheath adhesin 823791 6963643 HPG27_753 Helicobacter pylori G27 flagellar sheath adhesin YP_002266374.1 823009 R 563041 CDS YP_002266375.1 208434709 6963644 complement(823910..824386) 1 NC_011333.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 824386 moaC 6963644 moaC Helicobacter pylori G27 molybdenum cofactor biosynthesis protein MoaC YP_002266375.1 823910 R 563041 CDS YP_002266376.1 208434710 6963645 complement(824395..824925) 1 NC_011333.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 824925 mogA 6963645 mogA Helicobacter pylori G27 molybdenum cofactor biosynthesis protein MogA YP_002266376.1 824395 R 563041 CDS YP_002266377.1 208434711 6963646 complement(824938..825375) 1 NC_011333.1 molybdopterin converting factor subunit 2 825375 6963646 HPG27_756 Helicobacter pylori G27 molybdopterin converting factor subunit 2 YP_002266377.1 824938 R 563041 CDS YP_002266378.1 208434712 6963647 complement(825376..825597) 1 NC_011333.1 molybdopterin converting factor subunit 1 825597 6963647 HPG27_757 Helicobacter pylori G27 molybdopterin converting factor subunit 1 YP_002266378.1 825376 R 563041 CDS YP_002266379.1 208434713 6963648 complement(825673..826308) 1 NC_011333.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 826308 ribA 6963648 ribA Helicobacter pylori G27 GTP cyclohydrolase II YP_002266379.1 825673 R 563041 CDS YP_002266380.1 208434714 6963649 complement(826341..827123) 1 NC_011333.1 hypothetical protein 827123 6963649 HPG27_759 Helicobacter pylori G27 hypothetical protein YP_002266380.1 826341 R 563041 CDS YP_002266381.1 208434715 6963650 complement(827269..828303) 1 NC_011333.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 828303 6963650 HPG27_760 Helicobacter pylori G27 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_002266381.1 827269 R 563041 CDS YP_002266382.1 208434716 6963651 complement(828484..829338) 1 NC_011333.1 lipooligosaccharide 5G8 epitope biosynthesis-associated protein 829338 6963651 HPG27_761 Helicobacter pylori G27 lipooligosaccharide 5G8 epitope biosynthesis-associated protein YP_002266382.1 828484 R 563041 CDS YP_002266383.1 208434717 6963652 829420..830040 1 NC_011333.1 metalloprotease 830040 6963652 HPG27_762 Helicobacter pylori G27 metalloprotease YP_002266383.1 829420 D 563041 CDS YP_002266384.1 208434718 6963653 complement(830051..832429) 1 NC_011333.1 iron (III) dicitrate transport protein 832429 6963653 HPG27_763 Helicobacter pylori G27 iron (III) dicitrate transport protein YP_002266384.1 830051 R 563041 CDS YP_002266385.1 208434719 6963654 complement(832637..832996) 1 NC_011333.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 832996 acpS 6963654 acpS Helicobacter pylori G27 4'-phosphopantetheinyl transferase YP_002266385.1 832637 R 563041 CDS YP_002266386.1 208434720 6963655 complement(833003..833554) 1 NC_011333.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body-associated protein FliL 833554 fliL 6963655 fliL Helicobacter pylori G27 flagellar basal body-associated protein FliL YP_002266386.1 833003 R 563041 CDS YP_002266387.1 208434721 6963656 complement(833563..834108) 1 NC_011333.1 N-6 adenine methyltransferase 834108 6963656 HPG27_766 Helicobacter pylori G27 N-6 adenine methyltransferase YP_002266387.1 833563 R 563041 CDS YP_002266388.1 208434722 6963657 complement(834144..834470) 1 NC_011333.1 hypothetical protein 834470 6963657 HPG27_767 Helicobacter pylori G27 hypothetical protein YP_002266388.1 834144 R 563041 CDS YP_002266389.1 208434723 6963658 complement(834821..835864) 1 NC_011333.1 hypothetical protein 835864 6963658 HPG27_768 Helicobacter pylori G27 hypothetical protein YP_002266389.1 834821 R 563041 CDS YP_002266390.1 208434724 6963659 835963..836580 1 NC_011333.1 hypothetical protein 836580 6963659 HPG27_769 Helicobacter pylori G27 hypothetical protein YP_002266390.1 835963 D 563041 CDS YP_002266391.1 208434725 6963660 836581..837348 1 NC_011333.1 thiamine biosynthesis protein 837348 6963660 HPG27_770 Helicobacter pylori G27 thiamine biosynthesis protein YP_002266391.1 836581 D 563041 CDS YP_002266392.1 208434726 6963661 837364..838137 1 NC_011333.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 838137 motA 6963661 motA Helicobacter pylori G27 flagellar motor protein MotA YP_002266392.1 837364 D 563041 CDS YP_002266393.1 208434727 6963662 838140..838913 1 NC_011333.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 838913 motB 6963662 motB Helicobacter pylori G27 flagellar motor protein MotB YP_002266393.1 838140 D 563041 CDS YP_002266394.1 208434728 6963663 838910..839356 1 NC_011333.1 hypothetical protein 839356 6963663 HPG27_773 Helicobacter pylori G27 hypothetical protein YP_002266394.1 838910 D 563041 CDS YP_002266395.1 208434729 6963664 839425..839817 1 NC_011333.1 osmoprotection protein 839817 6963664 HPG27_774 Helicobacter pylori G27 osmoprotection protein YP_002266395.1 839425 D 563041 CDS YP_002266396.1 208434730 6963665 complement(839786..840295) 1 NC_011333.1 hypothetical protein 840295 6963665 HPG27_775 Helicobacter pylori G27 hypothetical protein YP_002266396.1 839786 R 563041 CDS YP_002266397.1 208434731 6963666 complement(840352..841170) 1 NC_011333.1 DNA methylase 841170 6963666 HPG27_776 Helicobacter pylori G27 DNA methylase YP_002266397.1 840352 R 563041 CDS YP_002266398.1 208434732 6963667 841421..843082 1 NC_011333.1 osmo protection protein 843082 6963667 HPG27_777 Helicobacter pylori G27 osmo protection protein YP_002266398.1 841421 D 563041 CDS YP_002266399.1 208434733 6963668 843086..843727 1 NC_011333.1 osmoprotection protein 843727 6963668 HPG27_778 Helicobacter pylori G27 osmoprotection protein YP_002266399.1 843086 D 563041 CDS YP_002266400.1 208434734 6963669 843910..844371 1 NC_011333.1 hypothetical protein 844371 6963669 HPG27_779 Helicobacter pylori G27 hypothetical protein YP_002266400.1 843910 D 563041 CDS YP_002266401.1 208434735 6963670 844372..846156 1 NC_011333.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 846156 uvrC 6963670 uvrC Helicobacter pylori G27 excinuclease ABC subunit C YP_002266401.1 844372 D 563041 CDS YP_002266402.1 208434736 6963671 846167..847432 1 NC_011333.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 847432 uvrC 6963671 uvrC Helicobacter pylori G27 homoserine dehydrogenase YP_002266402.1 846167 D 563041 CDS YP_002266403.1 208434737 6963672 847433..847777 1 NC_011333.1 hypothetical protein 847777 6963672 HPG27_782 Helicobacter pylori G27 hypothetical protein YP_002266403.1 847433 D 563041 CDS YP_002266404.1 208434738 6963673 847866..848186 1 NC_011333.1 thioredoxin 848186 trxA 6963673 trxA Helicobacter pylori G27 thioredoxin YP_002266404.1 847866 D 563041 CDS YP_002266405.1 208434739 6963674 848192..849127 1 NC_011333.1 thioredoxin reductase 849127 trxB 6963674 trxB Helicobacter pylori G27 thioredoxin reductase YP_002266405.1 848192 D 563041 CDS YP_002266406.1 208434740 6963675 849336..850157 1 NC_011333.1 beta-1,4-galactosyl transferase 850157 6963675 HPG27_785 Helicobacter pylori G27 beta-1,4-galactosyl transferase YP_002266406.1 849336 D 563041 CDS YP_002266407.1 208434741 6963676 complement(850380..850628) 1 NC_011333.1 RNA binding protein 850628 6963676 HPG27_786 Helicobacter pylori G27 RNA binding protein YP_002266407.1 850380 R 563041 CDS YP_002266408.1 208434742 6963677 complement(850949..851629) 1 NC_011333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; F0F1 ATP synthase subunit A 851629 6963677 HPG27_787 Helicobacter pylori G27 F0F1 ATP synthase subunit A YP_002266408.1 850949 R 563041 CDS YP_002266409.1 208434743 6963678 complement(851751..853196) 1 NC_011333.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 853196 6963678 HPG27_788 Helicobacter pylori G27 inosine 5'-monophosphate dehydrogenase YP_002266409.1 851751 R 563041 CDS YP_002266410.1 208434744 6963679 complement(853206..854567) 1 NC_011333.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 854567 gatA 6963679 gatA Helicobacter pylori G27 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_002266410.1 853206 R 563041 CDS YP_002266411.1 208434745 6963680 complement(854626..855216) 1 NC_011333.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 855216 coaE 6963680 coaE Helicobacter pylori G27 dephospho-CoA kinase YP_002266411.1 854626 R 563041 CDS YP_002266412.1 208434746 6963681 complement(855218..856006) 1 NC_011333.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 856006 speE 6963681 speE Helicobacter pylori G27 spermidine synthase YP_002266412.1 855218 R 563041 CDS YP_002266413.1 208434747 6963682 complement(856098..856976) 1 NC_011333.1 hypothetical protein 856976 6963682 HPG27_792 Helicobacter pylori G27 hypothetical protein YP_002266413.1 856098 R 563041 CDS YP_002266414.1 208434748 6963683 857053..858435 1 NC_011333.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 858435 engA 6963683 engA Helicobacter pylori G27 GTP-binding protein EngA YP_002266414.1 857053 D 563041 CDS YP_002266415.1 208434749 6963684 858578..858862 1 NC_011333.1 DNA-binding protein HU 858862 6963684 HPG27_794 Helicobacter pylori G27 DNA-binding protein HU YP_002266415.1 858578 D 563041 CDS YP_002266416.1 208434750 6963686 859455..860066 1 NC_011333.1 hypothetical protein 860066 6963686 HPG27_795 Helicobacter pylori G27 hypothetical protein YP_002266416.1 859455 D 563041 CDS YP_002266417.1 208434751 6963687 860086..860703 1 NC_011333.1 hypothetical protein 860703 6963687 HPG27_796 Helicobacter pylori G27 hypothetical protein YP_002266417.1 860086 D 563041 CDS YP_002266418.1 208434752 6963688 860700..862463 1 NC_011333.1 outer membrane protein P1 862463 6963688 HPG27_797 Helicobacter pylori G27 outer membrane protein P1 YP_002266418.1 860700 D 563041 CDS YP_002266419.1 208434753 6963689 862467..863468 1 NC_011333.1 UDP-GlcNAcC6de hydratase 863468 6963689 HPG27_798 Helicobacter pylori G27 UDP-GlcNAcC6de hydratase YP_002266419.1 862467 D 563041 CDS YP_002266420.1 208434754 6963690 863465..864742 1 NC_011333.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 864742 6963690 HPG27_799 Helicobacter pylori G27 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase YP_002266420.1 863465 D 563041 CDS YP_002266421.1 208434755 6963691 864742..865479 1 NC_011333.1 hypothetical protein 865479 6963691 HPG27_800 Helicobacter pylori G27 hypothetical protein YP_002266421.1 864742 D 563041 CDS YP_002266422.1 208434756 6963692 complement(865511..866146) 1 NC_011333.1 Condenses 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate to form thiamine monophosphate; thiamine-phosphate pyrophosphorylase 866146 thiE 6963692 thiE Helicobacter pylori G27 thiamine-phosphate pyrophosphorylase YP_002266422.1 865511 R 563041 CDS YP_002266423.1 208434757 6963693 complement(866166..866975) 1 NC_011333.1 thiamine biosynthesis protein 866975 6963693 HPG27_802 Helicobacter pylori G27 thiamine biosynthesis protein YP_002266423.1 866166 R 563041 CDS YP_002266424.1 208434758 6963694 complement(866972..867754) 1 NC_011333.1 catalyzes the formation of 4-methyl-5-(2-phosphoethyl)-thiazole and ADP from 4-methyl-5-(2-hydroxyethyl)-thiazole and ATP; hydroxyethylthiazole kinase 867754 6963694 HPG27_803 Helicobacter pylori G27 hydroxyethylthiazole kinase YP_002266424.1 866972 R 563041 CDS YP_002266425.1 208434759 6963695 complement(867840..870830) 1 NC_011333.1 type I restriction enzyme R protein 870830 6963695 HPG27_804 Helicobacter pylori G27 type I restriction enzyme R protein YP_002266425.1 867840 R 563041 CDS YP_002266426.1 208434760 6963696 complement(870967..872256) 1 NC_011333.1 HP0790-like protein 872256 6963696 HPG27_805 Helicobacter pylori G27 HP0790-like protein YP_002266426.1 870967 R 563041 CDS YP_002266427.1 208434761 6963697 complement(872266..873861) 1 NC_011333.1 type I restriction enzyme M protein 873861 6963697 HPG27_806 Helicobacter pylori G27 type I restriction enzyme M protein YP_002266427.1 872266 R 563041 CDS YP_002266428.1 208434762 6963698 874035..874718 1 NC_011333.1 hypothetical protein 874718 6963698 HPG27_807 Helicobacter pylori G27 hypothetical protein YP_002266428.1 874035 D 563041 CDS YP_002266429.1 208434763 6963699 complement(874947..875879) 1 NC_011333.1 hypothetical protein 875879 6963699 HPG27_808 Helicobacter pylori G27 hypothetical protein YP_002266429.1 874947 R 563041 CDS YP_002266430.1 208434764 6963700 complement(875876..877477) 1 NC_011333.1 ABC transporter ATP-binding protein 877477 6963700 HPG27_809 Helicobacter pylori G27 ABC transporter ATP-binding protein YP_002266430.1 875876 R 563041 CDS YP_002266431.1 208434765 6963701 877675..878652 1 NC_011333.1 guanosine 5'-monophosphate oxidoreductase 878652 6963701 HPG27_810 Helicobacter pylori G27 guanosine 5'-monophosphate oxidoreductase YP_002266431.1 877675 D 563041 CDS YP_002266432.1 208434766 6963702 complement(878808..879374) 1 NC_011333.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; phosphoheptose isomerase 879374 6963702 HPG27_811 Helicobacter pylori G27 phosphoheptose isomerase YP_002266432.1 878808 R 563041 CDS YP_002266433.1 208434767 6963703 complement(879379..880770) 1 NC_011333.1 ADP-heptose synthase 880770 6963703 HPG27_812 Helicobacter pylori G27 ADP-heptose synthase YP_002266433.1 879379 R 563041 CDS YP_002266434.1 208434768 6963704 complement(880767..881759) 1 NC_011333.1 ADP-L-glycero-D-mannoheptose-6-epimerase 881759 6963704 HPG27_813 Helicobacter pylori G27 ADP-L-glycero-D-mannoheptose-6-epimerase YP_002266434.1 880767 R 563041 CDS YP_002266435.1 208434769 6963705 complement(881768..882265) 1 NC_011333.1 hypothetical protein 882265 6963705 HPG27_814 Helicobacter pylori G27 hypothetical protein YP_002266435.1 881768 R 563041 CDS YP_002266436.1 208434770 6963706 complement(882279..883001) 1 NC_011333.1 hypothetical protein 883001 6963706 HPG27_815 Helicobacter pylori G27 hypothetical protein YP_002266436.1 882279 R 563041 CDS YP_002266437.1 208434771 6963707 complement(883010..883681) 1 NC_011333.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 883681 6963707 HPG27_816 Helicobacter pylori G27 pantothenate kinase YP_002266437.1 883010 R 563041 CDS YP_002266438.1 208434772 6963708 complement(883686..885353) 1 NC_011333.1 hypothetical protein 885353 6963708 HPG27_817 Helicobacter pylori G27 hypothetical protein YP_002266438.1 883686 R 563041 CDS YP_002266439.1 208434773 6963709 complement(885358..886014) 1 NC_011333.1 hypothetical protein 886014 6963709 HPG27_818 Helicobacter pylori G27 hypothetical protein YP_002266439.1 885358 R 563041 CDS YP_002266440.1 208434774 6963710 complement(886011..886370) 1 NC_011333.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 886370 dut 6963710 dut Helicobacter pylori G27 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_002266440.1 886011 R 563041 CDS YP_002266441.1 208434775 6963711 complement(886438..886932) 1 NC_011333.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 886932 greA 6963711 greA Helicobacter pylori G27 transcription elongation factor GreA YP_002266441.1 886438 R 563041 CDS YP_002266442.1 208434776 6963712 complement(886973..888055) 1 NC_011333.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 888055 6963712 HPG27_821 Helicobacter pylori G27 ipid-A-disaccharide synthase YP_002266442.1 886973 R 563041 CDS YP_002266443.1 208434777 6963713 complement(888055..888516) 1 NC_011333.1 hypothetical protein 888516 6963713 HPG27_822 Helicobacter pylori G27 hypothetical protein YP_002266443.1 888055 R 563041 CDS YP_002266444.1 208434778 6963714 complement(888523..888876) 1 NC_011333.1 plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 888876 hypA 6963714 hypA Helicobacter pylori G27 hydrogenase nickel incorporation protein YP_002266444.1 888523 R 563041 CDS YP_002266445.1 208434779 6963715 complement(888935..891091) 1 NC_011333.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 891091 flgE 6963715 flgE Helicobacter pylori G27 flagellar hook protein FlgE YP_002266445.1 888935 R 563041 CDS YP_002266446.1 208434780 6963716 complement(891300..892034) 1 NC_011333.1 CDP-diacylglycerol pyrophosphatase 892034 6963716 HPG27_825 Helicobacter pylori G27 CDP-diacylglycerol pyrophosphatase YP_002266446.1 891300 R 563041 CDS YP_002266447.1 208434781 6963717 892387..892716 1 NC_011333.1 alkylphosphonate uptake protein 892716 6963717 HPG27_826 Helicobacter pylori G27 alkylphosphonate uptake protein YP_002266447.1 892387 D 563041 CDS YP_002266448.1 208434782 6963718 complement(892768..892983) 1 NC_011333.1 hypothetical protein 892983 6963718 HPG27_827 Helicobacter pylori G27 hypothetical protein YP_002266448.1 892768 R 563041 CDS YP_002266449.1 208434783 6963719 complement(893068..893943) 1 NC_011333.1 hypothetical protein 893943 6963719 HPG27_828 Helicobacter pylori G27 hypothetical protein YP_002266449.1 893068 R 563041 CDS YP_002266450.1 208434784 6963720 complement(894088..895605) 1 NC_011333.1 catalase 895605 6963720 HPG27_829 Helicobacter pylori G27 catalase YP_002266450.1 894088 R 563041 CDS YP_002266451.1 208434785 6963721 895928..898303 1 NC_011333.1 iron-regulated outer membrane protein 898303 6963721 HPG27_830 Helicobacter pylori G27 iron-regulated outer membrane protein YP_002266451.1 895928 D 563041 CDS YP_002266452.1 208434786 6963722 complement(898304..898777) 1 NC_011333.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 898777 ruvC 6963722 ruvC Helicobacter pylori G27 Holliday junction resolvase YP_002266452.1 898304 R 563041 CDS YP_002266453.1 208434787 6963723 898909..899634 1 NC_011333.1 hypothetical protein 899634 6963723 HPG27_832 Helicobacter pylori G27 hypothetical protein YP_002266453.1 898909 D 563041 CDS YP_002266454.1 208434788 6963724 complement(899788..899976) 1 NC_011333.1 hypothetical protein 899976 6963724 HPG27_833 Helicobacter pylori G27 hypothetical protein YP_002266454.1 899788 R 563041 CDS YP_002266455.1 208434789 6963725 complement(900121..900318) 1 NC_011333.1 hypothetical protein 900318 6963725 HPG27_834 Helicobacter pylori G27 hypothetical protein YP_002266455.1 900121 R 563041 CDS YP_002266456.1 208434790 6963726 complement(900465..900614) 1 NC_011333.1 hypothetical protein 900614 6963726 HPG27_835 Helicobacter pylori G27 hypothetical protein YP_002266456.1 900465 R 563041 CDS YP_002266457.1 208434791 6963727 complement(900797..901348) 1 NC_011333.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 901348 ruvA 6963727 ruvA Helicobacter pylori G27 Holliday junction DNA helicase RuvA YP_002266457.1 900797 R 563041 CDS YP_002266458.1 208434792 6963728 complement(901374..903218) 1 NC_011333.1 hypothetical protein 903218 6963728 HPG27_837 Helicobacter pylori G27 hypothetical protein YP_002266458.1 901374 R 563041 CDS YP_002266459.1 208434793 6963729 903311..904771 1 NC_011333.1 virulence factor mviN protein 904771 mviN 6963729 mviN Helicobacter pylori G27 virulence factor mviN protein YP_002266459.1 903311 D 563041 CDS YP_002266460.1 208434794 6963730 904772..906169 1 NC_011333.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 906169 cysS 6963730 cysS Helicobacter pylori G27 cysteinyl-tRNA synthetase YP_002266460.1 904772 D 563041 CDS YP_002266461.1 208434795 6963731 906393..910277 1 NC_011333.1 vacuolating cytotoxin A 910277 vacA 6963731 vacA Helicobacter pylori G27 vacuolating cytotoxin A YP_002266461.1 906393 D 563041 CDS YP_002266462.1 208434796 6963732 complement(910336..911103) 1 NC_011333.1 iron (III) dicitrate ABC transporter ATP-binding protein 911103 6963732 HPG27_841 Helicobacter pylori G27 iron (III) dicitrate ABC transporter ATP-binding protein YP_002266462.1 910336 R 563041 CDS YP_002266463.1 208434797 6963733 complement(911103..912050) 1 NC_011333.1 iron (III) dicitrate ABC transporter permease 912050 6963733 HPG27_842 Helicobacter pylori G27 iron (III) dicitrate ABC transporter permease YP_002266463.1 911103 R 563041 CDS YP_002266464.1 208434798 6963734 complement(912076..912930) 1 NC_011333.1 short-chain oxidoreductase 912930 6963734 HPG27_843 Helicobacter pylori G27 short-chain oxidoreductase YP_002266464.1 912076 R 563041 CDS YP_002266465.1 208434799 6963735 913019..913594 1 NC_011333.1 acyl coenzyme A thioesterase 913594 6963735 HPG27_844 Helicobacter pylori G27 acyl coenzyme A thioesterase YP_002266465.1 913019 D 563041 CDS YP_002266466.1 208434800 6963736 complement(913732..913884) 1 NC_011333.1 hypothetical protein 913884 6963736 HPG27_845 Helicobacter pylori G27 hypothetical protein YP_002266466.1 913732 R 563041 CDS YP_002266467.1 208434801 6963737 complement(913958..914269) 1 NC_011333.1 hypothetical protein 914269 6963737 HPG27_846 Helicobacter pylori G27 hypothetical protein YP_002266467.1 913958 R 563041 CDS YP_002266468.1 208434802 6963738 complement(914347..914535) 1 NC_011333.1 hypothetical protein 914535 6963738 HPG27_847 Helicobacter pylori G27 hypothetical protein YP_002266468.1 914347 R 563041 CDS YP_002266469.1 208434803 6963739 complement(914600..914971) 1 NC_011333.1 hypothetical protein 914971 6963739 HPG27_848 Helicobacter pylori G27 hypothetical protein YP_002266469.1 914600 R 563041 CDS YP_002266470.1 208434805 6963740 complement(915374..917596) 1 NC_011333.1 outer membrane protein 917596 hopU 6963740 hopU Helicobacter pylori G27 outer membrane protein YP_002266470.1 915374 R 563041 CDS YP_002266471.1 208434804 6963742 917595..917801 1 NC_011333.1 hypothetical protein 917801 6963742 HPG27_850 Helicobacter pylori G27 hypothetical protein YP_002266471.1 917595 D 563041 CDS YP_002266472.1 208434806 6963744 918088..918609 1 NC_011333.1 hypothetical protein 918609 6963744 HPG27_851 Helicobacter pylori G27 hypothetical protein YP_002266472.1 918088 D 563041 CDS YP_002266473.1 208434807 6963745 complement(918560..919672) 1 NC_011333.1 hydrogenase expression/formation protein 919672 hypD 6963745 hypD Helicobacter pylori G27 hydrogenase expression/formation protein YP_002266473.1 918560 R 563041 CDS YP_002266474.1 208434808 6963746 complement(919678..919911) 1 NC_011333.1 hydrogenase expression/formation protein 919911 hypC 6963746 hypC Helicobacter pylori G27 hydrogenase expression/formation protein YP_002266474.1 919678 R 563041 CDS YP_002266475.1 208434809 6963747 complement(919911..920639) 1 NC_011333.1 hydrogenase expression/formation protein 920639 hypB 6963747 hypB Helicobacter pylori G27 hydrogenase expression/formation protein YP_002266475.1 919911 R 563041 CDS YP_002266476.1 208434810 6963748 complement(920885..921184) 1 NC_011333.1 hypothetical protein 921184 6963748 HPG27_855 Helicobacter pylori G27 hypothetical protein YP_002266476.1 920885 R 563041 CDS YP_002266477.1 208434811 6963750 922356..923900 1 NC_011333.1 hypothetical protein 923900 6963750 HPG27_857 Helicobacter pylori G27 hypothetical protein YP_002266477.1 922356 D 563041 CDS YP_002266478.1 208434812 6963751 923951..924901 1 NC_011333.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 924901 flgD 6963751 flgD Helicobacter pylori G27 flagellar basal body rod modification protein YP_002266478.1 923951 D 563041 CDS YP_002266479.1 208434813 6963752 924898..926715 1 NC_011333.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 926715 flgE 6963752 flgE Helicobacter pylori G27 flagellar hook protein FlgE YP_002266479.1 924898 D 563041 CDS YP_002266480.1 208434814 6963753 926767..927354 1 NC_011333.1 restriction endonuclease 927354 6963753 HPG27_860 Helicobacter pylori G27 restriction endonuclease YP_002266480.1 926767 D 563041 CDS YP_002266481.1 208434815 6963754 927364..928509 1 NC_011333.1 adenine specific DNA methyltransferase 928509 6963754 HPG27_861 Helicobacter pylori G27 adenine specific DNA methyltransferase YP_002266481.1 927364 D 563041 CDS YP_002266482.1 208434816 6963755 928518..930545 1 NC_011333.1 rephelicase, single-stranded DNA-dependent ATPase 930545 6963755 HPG27_862 Helicobacter pylori G27 rephelicase, single-stranded DNA-dependent ATPase YP_002266482.1 928518 D 563041 CDS YP_002266483.1 208434817 6963756 931085..932638 1 NC_011333.1 outer membrane protein 932638 hopC 6963756 hopC Helicobacter pylori G27 outer membrane protein YP_002266483.1 931085 D 563041 CDS YP_002266484.1 208434818 6963757 932660..934258 1 NC_011333.1 outer membrane protein 934258 hopB 6963757 hopB Helicobacter pylori G27 outer membrane protein YP_002266484.1 932660 D 563041 CDS YP_002266485.1 208434819 6963758 complement(935039..936661) 1 NC_011333.1 outer membrane protein 936661 hopG-2 6963758 hopG-2 Helicobacter pylori G27 outer membrane protein YP_002266485.1 935039 R 563041 CDS YP_002266486.1 208434820 6963759 complement(936831..939266) 1 NC_011333.1 iron-regulated outer membrane protein 939266 6963759 HPG27_866 Helicobacter pylori G27 iron-regulated outer membrane protein YP_002266486.1 936831 R 563041 CDS YP_002266487.1 208434821 6963760 complement(939443..939874) 1 NC_011333.1 hypothetical protein 939874 6963760 HPG27_867 Helicobacter pylori G27 hypothetical protein YP_002266487.1 939443 R 563041 CDS YP_002266488.1 208434822 6963761 complement(939879..943136) 1 NC_011333.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 943136 carB 6963761 carB Helicobacter pylori G27 carbamoyl phosphate synthase large subunit YP_002266488.1 939879 R 563041 CDS YP_002266489.1 208434823 6963762 complement(943237..943929) 1 NC_011333.1 hypothetical protein 943929 6963762 HPG27_869 Helicobacter pylori G27 hypothetical protein YP_002266489.1 943237 R 563041 CDS YP_002266490.1 208434824 6963763 944074..945072 1 NC_011333.1 glyceraldehyde-3-phosphate dehydrogenase 945072 gapA 6963763 gapA Helicobacter pylori G27 glyceraldehyde-3-phosphate dehydrogenase YP_002266490.1 944074 D 563041 CDS YP_002266491.1 208434825 6963764 945152..952672 1 NC_011333.1 vacuolating cytotoxin (VacA)-like protein 952672 6963764 HPG27_871 Helicobacter pylori G27 vacuolating cytotoxin (VacA)-like protein YP_002266491.1 945152 D 563041 CDS YP_002266492.1 208434826 6963765 952724..953827 1 NC_011333.1 outer membrane protein 953827 hopK-2 6963765 hopK-2 Helicobacter pylori G27 outer membrane protein YP_002266492.1 952724 D 563041 CDS YP_002266493.1 208434827 6963766 complement(953894..954100) 1 NC_011333.1 4-oxalocrotonate tautomerase 954100 6963766 HPG27_873 Helicobacter pylori G27 4-oxalocrotonate tautomerase YP_002266493.1 953894 R 563041 CDS YP_002266494.1 208434828 6963767 954241..954822 1 NC_011333.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 954822 recR 6963767 recR Helicobacter pylori G27 recombination protein RecR YP_002266494.1 954241 D 563041 CDS YP_002266495.1 208434829 6963768 954819..955964 1 NC_011333.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 955964 truD 6963768 truD Helicobacter pylori G27 tRNA pseudouridine synthase D YP_002266495.1 954819 D 563041 CDS YP_002266496.1 208434830 6963769 956041..956883 1 NC_011333.1 putative metalloprotease; heat shock protein HtpX 956883 6963769 HPG27_876 Helicobacter pylori G27 heat shock protein HtpX YP_002266496.1 956041 D 563041 CDS YP_002266497.1 208434831 6963770 956884..957426 1 NC_011333.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 957426 folE 6963770 folE Helicobacter pylori G27 GTP cyclohydrolase I YP_002266497.1 956884 D 563041 CDS YP_002266498.1 208434832 6963771 957442..958353 1 NC_011333.1 geranyltrans transferase 958353 6963771 HPG27_878 Helicobacter pylori G27 geranyltrans transferase YP_002266498.1 957442 D 563041 CDS YP_002266499.1 208434833 6963772 958350..959153 1 NC_011333.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 959153 surE 6963772 surE Helicobacter pylori G27 stationary phase survival protein SurE YP_002266499.1 958350 D 563041 CDS YP_002266500.1 208434834 6963773 959150..959809 1 NC_011333.1 hypothetical protein 959809 6963773 HPG27_880 Helicobacter pylori G27 hypothetical protein YP_002266500.1 959150 D 563041 CDS YP_002266501.1 208434835 6963774 959813..960415 1 NC_011333.1 hypothetical protein 960415 6963774 HPG27_881 Helicobacter pylori G27 hypothetical protein YP_002266501.1 959813 D 563041 CDS YP_002266502.1 208434836 6963775 960412..961167 1 NC_011333.1 hypothetical protein 961167 6963775 HPG27_882 Helicobacter pylori G27 hypothetical protein YP_002266502.1 960412 D 563041 CDS YP_002266503.1 208434837 6963776 961178..961663 1 NC_011333.1 hypothetical protein 961663 6963776 HPG27_883 Helicobacter pylori G27 hypothetical protein YP_002266503.1 961178 D 563041 CDS YP_002266504.1 208434838 6963777 961753..961995 1 NC_011333.1 putative outer membrane protein 961995 6963777 HPG27_884 Helicobacter pylori G27 putative outer membrane protein YP_002266504.1 961753 D 563041 CDS YP_002266505.1 208434839 6963778 complement(962157..963497) 1 NC_011333.1 proline and betaine transporter 963497 6963778 HPG27_885 Helicobacter pylori G27 proline and betaine transporter YP_002266505.1 962157 R 563041 CDS YP_002266506.1 208434840 6963779 complement(963787..964053) 1 NC_011333.1 hypothetical protein 964053 6963779 HPG27_886 Helicobacter pylori G27 hypothetical protein YP_002266506.1 963787 R 563041 CDS YP_002266507.1 208434841 6963780 complement(964118..965488) 1 NC_011333.1 hypothetical protein 965488 6963780 HPG27_887 Helicobacter pylori G27 hypothetical protein YP_002266507.1 964118 R 563041 CDS YP_002266508.1 208434842 6963781 complement(965552..966241) 1 NC_011333.1 amino acid ABC transporter permease 966241 6963781 HPG27_888 Helicobacter pylori G27 amino acid ABC transporter permease YP_002266508.1 965552 R 563041 CDS YP_002266509.1 208434843 6963782 complement(966249..967025) 1 NC_011333.1 amino acid ABC transporter periplasmic binding protein 967025 6963782 HPG27_889 Helicobacter pylori G27 amino acid ABC transporter periplasmic binding protein YP_002266509.1 966249 R 563041 CDS YP_002266510.1 208434844 6963783 complement(967096..968229) 1 NC_011333.1 alanine racemase, biosynthetic 968229 6963783 HPG27_890 Helicobacter pylori G27 alanine racemase, biosynthetic YP_002266510.1 967096 R 563041 CDS YP_002266511.1 208434845 6963784 complement(968236..969588) 1 NC_011333.1 D-alanine glycine permease 969588 6963784 HPG27_891 Helicobacter pylori G27 D-alanine glycine permease YP_002266511.1 968236 R 563041 CDS YP_002266512.1 208434846 6963785 complement(969629..970861) 1 NC_011333.1 D-amino acid dehydrogenase 970861 6963785 HPG27_892 Helicobacter pylori G27 D-amino acid dehydrogenase YP_002266512.1 969629 R 563041 CDS YP_002266513.1 208434847 6963786 complement(970884..971261) 1 NC_011333.1 translation initiation inhibitor 971261 6963786 HPG27_893 Helicobacter pylori G27 translation initiation inhibitor YP_002266513.1 970884 R 563041 CDS YP_002266514.1 208434848 6963791 972241..973674 1 NC_011333.1 hypothetical protein 973674 6963791 HPG27_894 Helicobacter pylori G27 hypothetical protein YP_002266514.1 972241 D 563041 CDS YP_002266515.1 208434849 6963792 974001..974363 1 NC_011333.1 hypothetical protein 974363 6963792 HPG27_895 Helicobacter pylori G27 hypothetical protein YP_002266515.1 974001 D 563041 CDS YP_002266516.1 208434850 6963793 complement(976591..977604) 1 NC_011333.1 hypothetical protein 977604 6963793 HPG27_896 Helicobacter pylori G27 hypothetical protein YP_002266516.1 976591 R 563041 CDS YP_002266517.1 208434851 6963794 complement(977614..978069) 1 NC_011333.1 SPOUT methyltransferase family protein; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 978069 6963794 HPG27_897 Helicobacter pylori G27 rRNA large subunit methyltransferase YP_002266517.1 977614 R 563041 CDS YP_002266518.1 208434852 6963795 complement(978080..978949) 1 NC_011333.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 978949 6963795 HPG27_898 Helicobacter pylori G27 acetyl-CoA carboxylase subunit beta YP_002266518.1 978080 R 563041 CDS YP_002266519.1 208434853 6963796 979030..979644 1 NC_011333.1 putative recombination protein RecO 979644 6963796 HPG27_899 Helicobacter pylori G27 putative recombination protein RecO YP_002266519.1 979030 D 563041 CDS YP_002266520.1 208434854 6963797 979655..980311 1 NC_011333.1 hypothetical protein 980311 6963797 HPG27_900 Helicobacter pylori G27 hypothetical protein YP_002266520.1 979655 D 563041 CDS YP_002266521.1 208434855 6963798 complement(980314..980880) 1 NC_011333.1 hypothetical protein 980880 6963798 HPG27_901 Helicobacter pylori G27 hypothetical protein YP_002266521.1 980314 R 563041 CDS YP_002266522.1 208434856 6963799 complement(980945..981577) 1 NC_011333.1 oxygen-insensitive NADPH nitroreductase 981577 6963799 HPG27_902 Helicobacter pylori G27 oxygen-insensitive NADPH nitroreductase YP_002266522.1 980945 R 563041 CDS YP_002266523.1 208434857 6963800 complement(981574..982428) 1 NC_011333.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 982428 6963800 HPG27_903 Helicobacter pylori G27 prolipoprotein diacylglyceryl transferase YP_002266523.1 981574 R 563041 CDS YP_002266524.1 208434858 6963801 complement(982438..983166) 1 NC_011333.1 ribosomal large subunit pseudouridine synthase C 983166 6963801 HPG27_904 Helicobacter pylori G27 ribosomal large subunit pseudouridine synthase C YP_002266524.1 982438 R 563041 CDS YP_002266525.1 208434859 6963802 complement(983178..984359) 1 NC_011333.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 984359 6963802 HPG27_905 Helicobacter pylori G27 3-deoxy-D-manno-octulosonic-acid transferase YP_002266525.1 983178 R 563041 CDS YP_002266526.1 208434860 6963803 complement(984360..985112) 1 NC_011333.1 hypothetical protein 985112 6963803 HPG27_906 Helicobacter pylori G27 hypothetical protein YP_002266526.1 984360 R 563041 CDS YP_002266527.1 208434861 6963804 complement(985122..985853) 1 NC_011333.1 hypothetical protein 985853 6963804 HPG27_907 Helicobacter pylori G27 hypothetical protein YP_002266527.1 985122 R 563041 CDS YP_002266528.1 208434862 6963805 complement(985855..986751) 1 NC_011333.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 986751 glyQ 6963805 glyQ Helicobacter pylori G27 glycyl-tRNA synthetase subunit alpha YP_002266528.1 985855 R 563041 CDS YP_002266529.1 208434863 6963806 complement(986765..987739) 1 NC_011333.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 987739 gpsA 6963806 gpsA Helicobacter pylori G27 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_002266529.1 986765 R 563041 CDS YP_002266530.1 208434864 6963807 complement(988097..989620) 1 NC_011333.1 hypothetical protein 989620 6963807 HPG27_910 Helicobacter pylori G27 hypothetical protein YP_002266530.1 988097 R 563041 CDS YP_002266531.1 208434865 6963808 complement(989692..990177) 1 NC_011333.1 hypothetical protein 990177 6963808 HPG27_911 Helicobacter pylori G27 hypothetical protein YP_002266531.1 989692 R 563041 CDS YP_002266532.1 208434866 6963809 complement(992039..993736) 1 NC_011333.1 hypothetical protein 993736 6963809 HPG27_912 Helicobacter pylori G27 hypothetical protein YP_002266532.1 992039 R 563041 CDS YP_002266533.1 208434867 6963810 complement(993733..995214) 1 NC_011333.1 hypothetical protein 995214 6963810 HPG27_913 Helicobacter pylori G27 hypothetical protein YP_002266533.1 993733 R 563041 CDS YP_002266534.1 208434868 6963811 complement(995262..995414) 1 NC_011333.1 hypothetical protein 995414 6963811 HPG27_914 Helicobacter pylori G27 hypothetical protein YP_002266534.1 995262 R 563041 CDS YP_002266535.1 208434869 6963812 complement(995870..996151) 1 NC_011333.1 hypothetical protein 996151 6963812 HPG27_915 Helicobacter pylori G27 hypothetical protein YP_002266535.1 995870 R 563041 CDS YP_002266536.1 208434870 6963813 complement(996162..999221) 1 NC_011333.1 cobalt-zinc-cadmium resistance protein 999221 6963813 HPG27_916 Helicobacter pylori G27 cobalt-zinc-cadmium resistance protein YP_002266536.1 996162 R 563041 CDS YP_002266537.1 208434871 6963814 complement(999221..1000300) 1 NC_011333.1 cobalt-zinc-cadmium resistance protein 1000300 6963814 HPG27_917 Helicobacter pylori G27 cobalt-zinc-cadmium resistance protein YP_002266537.1 999221 R 563041 CDS YP_002266538.1 208434872 6963815 complement(1000297..1001550) 1 NC_011333.1 hypothetical protein 1001550 6963815 HPG27_918 Helicobacter pylori G27 hypothetical protein YP_002266538.1 1000297 R 563041 CDS YP_002266539.1 208434873 6963816 complement(1001582..1003687) 1 NC_011333.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1003687 glyS 6963816 glyS Helicobacter pylori G27 glycyl-tRNA synthetase subunit beta YP_002266539.1 1001582 R 563041 CDS YP_002266540.1 208434874 6963817 1003800..1004858 1 NC_011333.1 hypothetical protein 1004858 6963817 HPG27_920 Helicobacter pylori G27 hypothetical protein YP_002266540.1 1003800 D 563041 CDS YP_002266541.1 208434875 6963818 1004871..1006346 1 NC_011333.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1006346 6963818 HPG27_921 Helicobacter pylori G27 phosphoglyceromutase YP_002266541.1 1004871 D 563041 CDS YP_002266542.1 208434876 6963819 1006361..1006642 1 NC_011333.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1006642 gatC 6963819 gatC Helicobacter pylori G27 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_002266542.1 1006361 D 563041 CDS YP_002266543.1 208434877 6963820 complement(1006761..1008071) 1 NC_011333.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine--8-amino-7-oxononanoate transaminase 1008071 6963820 HPG27_923 Helicobacter pylori G27 adenosylmethionine--8-amino-7-oxononanoate transaminase YP_002266543.1 1006761 R 563041 CDS YP_002266544.1 208434878 6963821 1008147..1009664 1 NC_011333.1 peptidyl-prolylcis-transisomerase D 1009664 6963821 HPG27_924 Helicobacter pylori G27 peptidyl-prolylcis-transisomerase D YP_002266544.1 1008147 D 563041 CDS YP_002266545.1 208434879 6963822 1009665..1011161 1 NC_011333.1 cell division protein 1011161 ftsA 6963822 ftsA Helicobacter pylori G27 cell division protein YP_002266545.1 1009665 D 563041 CDS YP_002266546.1 208434880 6963823 1011292..1012449 1 NC_011333.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 1012449 ftsZ 6963823 ftsZ Helicobacter pylori G27 cell division protein FtsZ YP_002266546.1 1011292 D 563041 CDS YP_002266547.1 208434881 6963824 1012854..1013018 1 NC_011333.1 hypothetical protein 1013018 6963824 HPG27_927 Helicobacter pylori G27 hypothetical protein YP_002266547.1 1012854 D 563041 CDS YP_002266548.1 208434882 6963825 complement(1013312..1013536) 1 NC_011333.1 hypothetical protein 1013536 6963825 HPG27_928 Helicobacter pylori G27 hypothetical protein YP_002266548.1 1013312 R 563041 CDS YP_002266549.1 208434883 6963826 1013613..1013909 1 NC_011333.1 hypothetical protein 1013909 6963826 HPG27_929 Helicobacter pylori G27 hypothetical protein YP_002266549.1 1013613 D 563041 CDS YP_002266550.1 208434884 6963827 1013920..1014192 1 NC_011333.1 exonuclease VII, large subunit 1014192 6963827 HPG27_930 Helicobacter pylori G27 exonuclease VII, large subunit YP_002266550.1 1013920 D 563041 CDS YP_002266551.1 208434885 6963829 1014666..1015193 1 NC_011333.1 hypothetical protein 1015193 6963829 HPG27_931 Helicobacter pylori G27 hypothetical protein YP_002266551.1 1014666 D 563041 CDS YP_002266552.1 208434886 6963830 1015806..1016024 1 NC_011333.1 hypothetical protein 1016024 6963830 HPG27_932 Helicobacter pylori G27 hypothetical protein YP_002266552.1 1015806 D 563041 CDS YP_002266553.1 208434887 6963831 1016096..1016920 1 NC_011333.1 hypothetical protein 1016920 6963831 HPG27_933 Helicobacter pylori G27 hypothetical protein YP_002266553.1 1016096 D 563041 CDS YP_002266554.1 208434888 6963832 1017000..1017161 1 NC_011333.1 hypothetical protein 1017161 6963832 HPG27_934 Helicobacter pylori G27 hypothetical protein YP_002266554.1 1017000 D 563041 CDS YP_002266555.1 208434889 6963833 1017207..1017422 1 NC_011333.1 hypothetical protein 1017422 6963833 HPG27_935 Helicobacter pylori G27 hypothetical protein YP_002266555.1 1017207 D 563041 CDS YP_002266556.1 208434890 6963834 complement(1017686..1018438) 1 NC_011333.1 hypothetical protein 1018438 6963834 HPG27_936 Helicobacter pylori G27 hypothetical protein YP_002266556.1 1017686 R 563041 CDS YP_002266557.1 208434891 6963835 complement(1018435..1018686) 1 NC_011333.1 hypothetical protein 1018686 6963835 HPG27_937 Helicobacter pylori G27 hypothetical protein YP_002266557.1 1018435 R 563041 CDS YP_002266558.1 208434892 6963836 complement(1018712..1018915) 1 NC_011333.1 hypothetical protein 1018915 6963836 HPG27_938 Helicobacter pylori G27 hypothetical protein YP_002266558.1 1018712 R 563041 CDS YP_002266559.1 208434893 6963837 complement(1018917..1019171) 1 NC_011333.1 hypothetical protein 1019171 6963837 HPG27_939 Helicobacter pylori G27 hypothetical protein YP_002266559.1 1018917 R 563041 CDS YP_002266560.1 208434894 6963838 complement(1019238..1019531) 1 NC_011333.1 hypothetical protein 1019531 6963838 HPG27_940 Helicobacter pylori G27 hypothetical protein YP_002266560.1 1019238 R 563041 CDS YP_002266561.1 208434895 6963839 complement(1019536..1021785) 1 NC_011333.1 hypothetical protein 1021785 6963839 HPG27_941 Helicobacter pylori G27 hypothetical protein YP_002266561.1 1019536 R 563041 CDS YP_002266562.1 208434896 6963840 complement(1021790..1022392) 1 NC_011333.1 protein kinase C-like protein 1022392 6963840 HPG27_942 Helicobacter pylori G27 protein kinase C-like protein YP_002266562.1 1021790 R 563041 CDS YP_002266563.1 208434897 6963841 complement(1022451..1023068) 1 NC_011333.1 protein phosphatase 2 C-like protein (ptc1) 1023068 6963841 HPG27_943 Helicobacter pylori G27 protein phosphatase 2 C-like protein (ptc1) YP_002266563.1 1022451 R 563041 CDS YP_002266564.1 208434898 6963842 complement(1023065..1023391) 1 NC_011333.1 hypothetical protein 1023391 6963842 HPG27_944 Helicobacter pylori G27 hypothetical protein YP_002266564.1 1023065 R 563041 CDS YP_002266565.1 208434899 6963843 complement(1023479..1024030) 1 NC_011333.1 phage/colicin/tellurite resistance cluster Y protein 1024030 6963843 HPG27_945 Helicobacter pylori G27 phage/colicin/tellurite resistance cluster Y protein YP_002266565.1 1023479 R 563041 CDS YP_002266566.1 208434900 6963846 complement(1028206..1028388) 1 NC_011333.1 hypothetical protein 1028388 6963846 HPG27_946 Helicobacter pylori G27 hypothetical protein YP_002266566.1 1028206 R 563041 CDS YP_002266567.1 208434901 6963847 1028819..1030564 1 NC_011333.1 hypothetical protein 1030564 6963847 HPG27_947 Helicobacter pylori G27 hypothetical protein YP_002266567.1 1028819 D 563041 CDS YP_002266568.1 208434902 6963848 1030605..1031858 1 NC_011333.1 hypothetical protein 1031858 6963848 HPG27_948 Helicobacter pylori G27 hypothetical protein YP_002266568.1 1030605 D 563041 CDS YP_002266569.1 208434903 6963849 1031902..1033761 1 NC_011333.1 hypothetical protein 1033761 6963849 HPG27_949 Helicobacter pylori G27 hypothetical protein YP_002266569.1 1031902 D 563041 CDS YP_002266570.1 208434904 6963850 1033868..1034806 1 NC_011333.1 hypothetical protein 1034806 6963850 HPG27_950 Helicobacter pylori G27 hypothetical protein YP_002266570.1 1033868 D 563041 CDS YP_002266571.1 208434905 6963851 complement(1034915..1036762) 1 NC_011333.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1036762 6963851 HPG27_951 Helicobacter pylori G27 arginine decarboxylase YP_002266571.1 1034915 R 563041 CDS YP_002266572.1 208434906 6963852 complement(1036777..1037946) 1 NC_011333.1 type 1 capsular polysaccharide biosynthesis protein J 1037946 6963852 HPG27_952 Helicobacter pylori G27 type 1 capsular polysaccharide biosynthesis protein J YP_002266572.1 1036777 R 563041 CDS YP_002266573.1 208434907 6963853 complement(1037951..1038379) 1 NC_011333.1 hypothetical protein 1038379 6963853 HPG27_953 Helicobacter pylori G27 hypothetical protein YP_002266573.1 1037951 R 563041 CDS YP_002266574.1 208434908 6963854 complement(1038395..1039180) 1 NC_011333.1 S-adenosyl methionine-dependent methyltransferase 1039180 6963854 HPG27_954 Helicobacter pylori G27 S-adenosyl methionine-dependent methyltransferase YP_002266574.1 1038395 R 563041 CDS YP_002266575.1 208434909 6963855 complement(1039184..1040191) 1 NC_011333.1 hypothetical protein 1040191 6963855 HPG27_955 Helicobacter pylori G27 hypothetical protein YP_002266575.1 1039184 R 563041 CDS YP_002266576.1 208434910 6963856 complement(1040192..1042144) 1 NC_011333.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1042144 6963856 HPG27_956 Helicobacter pylori G27 methionyl-tRNA synthetase YP_002266576.1 1040192 R 563041 CDS YP_002266577.1 208434911 6963857 1042313..1043482 1 NC_011333.1 cyclopropane fatty acid synthase 1043482 6963857 HPG27_957 Helicobacter pylori G27 cyclopropane fatty acid synthase YP_002266577.1 1042313 D 563041 CDS YP_002266578.1 208434912 6963858 complement(1043492..1045375) 1 NC_011333.1 hypothetical protein 1045375 6963858 HPG27_958 Helicobacter pylori G27 hypothetical protein YP_002266578.1 1043492 R 563041 CDS YP_002266579.1 208434913 6963859 1045764..1046528 1 NC_011333.1 hypothetical protein 1046528 6963859 HPG27_959 Helicobacter pylori G27 hypothetical protein YP_002266579.1 1045764 D 563041 CDS YP_002266580.1 208434914 6963860 1046540..1048216 1 NC_011333.1 hypothetical protein 1048216 6963860 HPG27_960 Helicobacter pylori G27 hypothetical protein YP_002266580.1 1046540 D 563041 CDS YP_002266581.1 208434915 6963861 1048432..1048734 1 NC_011333.1 hypothetical protein 1048734 6963861 HPG27_961 Helicobacter pylori G27 hypothetical protein YP_002266581.1 1048432 D 563041 CDS YP_002266582.1 208434916 6963862 1048735..1048995 1 NC_011333.1 hypothetical protein 1048995 6963862 HPG27_962 Helicobacter pylori G27 hypothetical protein YP_002266582.1 1048735 D 563041 CDS YP_002266583.1 208434917 6963864 1051623..1053434 1 NC_011333.1 DNA topoisomerase I 1053434 6963864 HPG27_964 Helicobacter pylori G27 DNA topoisomerase I YP_002266583.1 1051623 D 563041 CDS YP_002266584.1 208434918 6963865 1053564..1054550 1 NC_011333.1 competence protein 1054550 comB8-2 6963865 comB8-2 Helicobacter pylori G27 competence protein YP_002266584.1 1053564 D 563041 CDS YP_002266585.1 208434919 6963866 1054550..1056091 1 NC_011333.1 comB9-like competence protein 1056091 6963866 HPG27_966 Helicobacter pylori G27 comB9-like competence protein YP_002266585.1 1054550 D 563041 CDS YP_002266586.1 208434920 6963867 1056088..1057323 1 NC_011333.1 competence protein 1057323 comB10-2 6963867 comB10-2 Helicobacter pylori G27 competence protein YP_002266586.1 1056088 D 563041 CDS YP_002266587.1 208434921 6963868 1057393..1057689 1 NC_011333.1 hypothetical protein 1057689 6963868 HPG27_968 Helicobacter pylori G27 hypothetical protein YP_002266587.1 1057393 D 563041 CDS YP_002266588.1 208434922 6963869 1057939..1058205 1 NC_011333.1 hypothetical protein 1058205 6963869 HPG27_969 Helicobacter pylori G27 hypothetical protein YP_002266588.1 1057939 D 563041 CDS YP_002266589.1 208434923 6963870 1058237..1059178 1 NC_011333.1 virB11-like type IV secretion system ATPase 1059178 6963870 HPG27_970 Helicobacter pylori G27 virB11-like type IV secretion system ATPase YP_002266589.1 1058237 D 563041 CDS YP_002266590.1 208434924 6963871 1059175..1059630 1 NC_011333.1 hypothetical protein 1059630 6963871 HPG27_971 Helicobacter pylori G27 hypothetical protein YP_002266590.1 1059175 D 563041 CDS YP_002266591.1 208434925 6963872 1059627..1059917 1 NC_011333.1 hypothetical protein 1059917 6963872 HPG27_972 Helicobacter pylori G27 hypothetical protein YP_002266591.1 1059627 D 563041 CDS YP_002266592.1 208434926 6963873 1059918..1060475 1 NC_011333.1 hypothetical protein 1060475 6963873 HPG27_973 Helicobacter pylori G27 hypothetical protein YP_002266592.1 1059918 D 563041 CDS YP_002266593.1 208434927 6963874 1060476..1062203 1 NC_011333.1 cag island DNA transfer protein 1062203 6963874 HPG27_974 Helicobacter pylori G27 cag island DNA transfer protein YP_002266593.1 1060476 D 563041 CDS YP_002266594.1 208434928 6963875 complement(1062740..1063054) 1 NC_011333.1 hypothetical protein 1063054 6963875 HPG27_975 Helicobacter pylori G27 hypothetical protein YP_002266594.1 1062740 R 563041 CDS YP_002266595.1 208434929 6963876 1063336..1065246 1 NC_011333.1 hypothetical protein 1065246 6963876 HPG27_976 Helicobacter pylori G27 hypothetical protein YP_002266595.1 1063336 D 563041 CDS YP_002266596.1 208434930 6963877 complement(1065271..1066443) 1 NC_011333.1 hypothetical protein 1066443 6963877 HPG27_977 Helicobacter pylori G27 hypothetical protein YP_002266596.1 1065271 R 563041 CDS YP_002266597.1 208434931 6963878 complement(1066475..1066759) 1 NC_011333.1 hypothetical protein 1066759 6963878 HPG27_978 Helicobacter pylori G27 hypothetical protein YP_002266597.1 1066475 R 563041 CDS YP_002266598.1 208434932 6963879 complement(1066842..1067498) 1 NC_011333.1 PARA protein 1067498 6963879 HPG27_979 Helicobacter pylori G27 PARA protein YP_002266598.1 1066842 R 563041 CDS YP_002266599.1 208434933 6963880 complement(1067764..1076190) 1 NC_011333.1 adenine specific DNA methyltransferase 1076190 6963880 HPG27_980 Helicobacter pylori G27 adenine specific DNA methyltransferase YP_002266599.1 1067764 R 563041 CDS YP_002266600.1 208434934 6963881 1076345..1077382 1 NC_011333.1 hypothetical protein 1077382 6963881 HPG27_981 Helicobacter pylori G27 hypothetical protein YP_002266600.1 1076345 D 563041 CDS YP_002266601.1 208434935 6963882 1077383..1078777 1 NC_011333.1 hypothetical protein 1078777 6963882 HPG27_982 Helicobacter pylori G27 hypothetical protein YP_002266601.1 1077383 D 563041 CDS YP_002266602.1 208434936 6963883 1078838..1081051 1 NC_011333.1 periplasmic competence protein-like protein 1081051 6963883 HPG27_983 Helicobacter pylori G27 periplasmic competence protein-like protein YP_002266602.1 1078838 D 563041 CDS YP_002266603.1 208434937 6963884 1081055..1082440 1 NC_011333.1 hypothetical protein 1082440 6963884 HPG27_984 Helicobacter pylori G27 hypothetical protein YP_002266603.1 1081055 D 563041 CDS YP_002266604.1 208434938 6963885 1082440..1083642 1 NC_011333.1 hypothetical protein 1083642 6963885 HPG27_985 Helicobacter pylori G27 hypothetical protein YP_002266604.1 1082440 D 563041 CDS YP_002266605.1 208434939 6963886 complement(1083705..1084781) 1 NC_011333.1 integrase-recombinase protein 1084781 6963886 HPG27_986 Helicobacter pylori G27 integrase-recombinase protein YP_002266605.1 1083705 R 563041 CDS YP_002266606.1 208434940 6963891 complement(1085950..1086699) 1 NC_011333.1 putative neuraminyllactose-binding hemagglutinin-like protein 1086699 6963891 HPG27_987 Helicobacter pylori G27 putative neuraminyllactose-binding hemagglutinin-like protein YP_002266606.1 1085950 R 563041 CDS YP_002266607.1 208434941 6963892 complement(1086783..1088309) 1 NC_011333.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; GMP synthase 1088309 guaA 6963892 guaA Helicobacter pylori G27 GMP synthase YP_002266607.1 1086783 R 563041 CDS YP_002266608.1 208434942 6963893 complement(1088320..1088808) 1 NC_011333.1 hypothetical protein 1088808 6963893 HPG27_989 Helicobacter pylori G27 hypothetical protein YP_002266608.1 1088320 R 563041 CDS YP_002266609.1 208434943 6963894 complement(1088969..1091359) 1 NC_011333.1 biotin sulfoxide reductase 1091359 6963894 HPG27_990 Helicobacter pylori G27 biotin sulfoxide reductase YP_002266609.1 1088969 R 563041 CDS YP_002266610.1 208434944 6963895 complement(1091463..1092053) 1 NC_011333.1 hypothetical protein 1092053 6963895 HPG27_991 Helicobacter pylori G27 hypothetical protein YP_002266610.1 1091463 R 563041 CDS YP_002266611.1 208434945 6963896 complement(1092079..1093401) 1 NC_011333.1 nifS-like protein 1093401 6963896 HPG27_992 Helicobacter pylori G27 nifS-like protein YP_002266611.1 1092079 R 563041 CDS YP_002266612.1 208434946 6963897 complement(1093421..1093735) 1 NC_011333.1 ADP hydrolase 1093735 6963897 HPG27_993 Helicobacter pylori G27 ADP hydrolase YP_002266612.1 1093421 R 563041 CDS YP_002266613.1 208434947 6963898 1093816..1094802 1 NC_011333.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 1094802 pheS 6963898 pheS Helicobacter pylori G27 phenylalanyl-tRNA synthetase subunit alpha YP_002266613.1 1093816 D 563041 CDS YP_002266614.1 208434948 6963899 1094802..1097096 1 NC_011333.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 1097096 pheT 6963899 pheT Helicobacter pylori G27 phenylalanyl-tRNA synthetase subunit beta YP_002266614.1 1094802 D 563041 CDS YP_002266615.1 208434949 6963900 1097100..1098389 1 NC_011333.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 1098389 6963900 HPG27_996 Helicobacter pylori G27 3-phosphoshikimate 1-carboxyvinyltransferase YP_002266615.1 1097100 D 563041 CDS YP_002266616.1 208434950 6963901 1098391..1099203 1 NC_011333.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1099203 ispH 6963901 ispH Helicobacter pylori G27 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_002266616.1 1098391 D 563041 CDS YP_002266617.1 208434951 6963902 1099324..1100994 1 NC_011333.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 1100994 rpsA 6963902 rpsA Helicobacter pylori G27 30S ribosomal protein S1 YP_002266617.1 1099324 D 563041 CDS YP_002266618.1 208434952 6963903 1101023..1101574 1 NC_011333.1 hypothetical protein 1101574 6963903 HPG27_999 Helicobacter pylori G27 hypothetical protein YP_002266618.1 1101023 D 563041 CDS YP_002266619.1 208434953 6963904 1101590..1103164 1 NC_011333.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 1103164 6963904 HPG27_1000 Helicobacter pylori G27 D-3-phosphoglycerate dehydrogenase YP_002266619.1 1101590 D 563041 CDS YP_002266620.1 208434954 6963905 1103174..1105024 1 NC_011333.1 3-octaprenyl-4-hydroxybenzoate carboxylyase 1105024 6963905 HPG27_1001 Helicobacter pylori G27 3-octaprenyl-4-hydroxybenzoate carboxylyase YP_002266620.1 1103174 D 563041 CDS YP_002266621.1 208434955 6963906 1105047..1105715 1 NC_011333.1 hypothetical protein 1105715 6963906 HPG27_1002 Helicobacter pylori G27 hypothetical protein YP_002266621.1 1105047 D 563041 CDS YP_002266622.1 208434956 6963907 1105717..1106475 1 NC_011333.1 hypothetical protein 1106475 6963907 HPG27_1003 Helicobacter pylori G27 hypothetical protein YP_002266622.1 1105717 D 563041 CDS YP_002266623.1 208434957 6963908 1106479..1107414 1 NC_011333.1 CheA-MCP interaction modulator 1107414 cheV 6963908 cheV Helicobacter pylori G27 CheA-MCP interaction modulator YP_002266623.1 1106479 D 563041 CDS YP_002266624.1 208434958 6963909 1107471..1109894 1 NC_011333.1 auto phosphorylating histidine kinase 1109894 cheA 6963909 cheA Helicobacter pylori G27 auto phosphorylating histidine kinase YP_002266624.1 1107471 D 563041 CDS YP_002266625.1 208434959 6963910 1109891..1110388 1 NC_011333.1 CheA-MCP coupling protein 1110388 cheW 6963910 cheW Helicobacter pylori G27 CheA-MCP coupling protein YP_002266625.1 1109891 D 563041 CDS YP_002266626.1 208434960 6963911 complement(1110646..1111146) 1 NC_011333.1 adhesin-thiol peroxidase 1111146 6963911 HPG27_1007 Helicobacter pylori G27 adhesin-thiol peroxidase YP_002266626.1 1110646 R 563041 CDS YP_002266627.1 208434961 6963912 1111370..1112011 1 NC_011333.1 iron-dependent superoxide dismutase 1112011 6963912 HPG27_1008 Helicobacter pylori G27 iron-dependent superoxide dismutase YP_002266627.1 1111370 D 563041 CDS YP_002266628.1 208434962 6963913 1112063..1112782 1 NC_011333.1 hypothetical protein 1112782 6963913 HPG27_1009 Helicobacter pylori G27 hypothetical protein YP_002266628.1 1112063 D 563041 CDS YP_002266629.1 208434963 6963914 complement(1112814..1114556) 1 NC_011333.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1114556 6963914 HPG27_1010 Helicobacter pylori G27 primosome assembly protein PriA YP_002266629.1 1112814 R 563041 CDS YP_002266630.1 208434964 6963915 complement(1114658..1114894) 1 NC_011333.1 hypothetical protein 1114894 6963915 HPG27_1011 Helicobacter pylori G27 hypothetical protein YP_002266630.1 1114658 R 563041 CDS YP_002266631.1 208434965 6963916 complement(1114907..1115134) 1 NC_011333.1 hypothetical protein 1115134 6963916 HPG27_1012 Helicobacter pylori G27 hypothetical protein YP_002266631.1 1114907 R 563041 CDS YP_002266632.1 208434966 6963917 1115316..1116062 1 NC_011333.1 hypothetical protein 1116062 6963917 HPG27_1013 Helicobacter pylori G27 hypothetical protein YP_002266632.1 1115316 D 563041 CDS YP_002266633.1 208434967 6963918 complement(1116076..1116600) 1 NC_011333.1 hypothetical protein 1116600 6963918 HPG27_1014 Helicobacter pylori G27 hypothetical protein YP_002266633.1 1116076 R 563041 CDS YP_002266634.1 208434968 6963919 1116781..1118004 1 NC_011333.1 zinc-metalloprotease 1118004 6963919 HPG27_1015 Helicobacter pylori G27 zinc-metalloprotease YP_002266634.1 1116781 D 563041 CDS YP_002266635.1 208434969 6963920 1118001..1118825 1 NC_011333.1 S-adenosyl methionine-dependent methyltransferase 1118825 6963920 HPG27_1016 Helicobacter pylori G27 S-adenosyl methionine-dependent methyltransferase YP_002266635.1 1118001 D 563041 CDS YP_002266636.1 208434970 6963921 1118897..1120243 1 NC_011333.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1120243 6963921 HPG27_1017 Helicobacter pylori G27 glutamate dehydrogenase YP_002266636.1 1118897 D 563041 CDS YP_002266637.1 208434971 6963922 complement(1120262..1121599) 1 NC_011333.1 alpha1,3-fucosyl transferase 1121599 6963922 HPG27_1018 Helicobacter pylori G27 alpha1,3-fucosyl transferase YP_002266637.1 1120262 R 563041 CDS YP_002266638.1 208434972 6963923 complement(1121609..1124419) 1 NC_011333.1 cytochrome c-type biogenesis protein 1124419 6963923 HPG27_1019 Helicobacter pylori G27 cytochrome c-type biogenesis protein YP_002266638.1 1121609 R 563041 CDS YP_002266639.1 208434973 6963924 complement(1124428..1125099) 1 NC_011333.1 thiol:disulfide interchange protein 1125099 6963924 HPG27_1020 Helicobacter pylori G27 thiol:disulfide interchange protein YP_002266639.1 1124428 R 563041 CDS YP_002266640.1 208434974 6963925 complement(1125171..1126178) 1 NC_011333.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 1126178 hemH 6963925 hemH Helicobacter pylori G27 ferrochelatase YP_002266640.1 1125171 R 563041 CDS YP_002266641.1 208434975 6963926 1126234..1126665 1 NC_011333.1 hypothetical protein 1126665 6963926 HPG27_1022 Helicobacter pylori G27 hypothetical protein YP_002266641.1 1126234 D 563041 CDS YP_002266642.1 208434976 6963927 1126666..1127346 1 NC_011333.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 1127346 6963927 HPG27_1023 Helicobacter pylori G27 16S ribosomal RNA methyltransferase RsmE YP_002266642.1 1126666 D 563041 CDS YP_002266643.1 208434977 6963928 complement(1127370..1129466) 1 NC_011333.1 outer membrane protein 1129466 6963928 HPG27_1024 Helicobacter pylori G27 outer membrane protein YP_002266643.1 1127370 R 563041 CDS YP_002266644.1 208434978 6963929 complement(1129626..1130192) 1 NC_011333.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 1130192 dcd 6963929 dcd Helicobacter pylori G27 deoxycytidine triphosphate deaminase YP_002266644.1 1129626 R 563041 CDS YP_002266645.1 208434979 6963930 1130323..1130796 1 NC_011333.1 biotin carboxyl carrier protein 1130796 6963930 HPG27_1026 Helicobacter pylori G27 biotin carboxyl carrier protein YP_002266645.1 1130323 D 563041 CDS YP_002266646.1 208434980 6963931 1130802..1132169 1 NC_011333.1 biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase 1132169 6963931 HPG27_1027 Helicobacter pylori G27 biotin carboxylase YP_002266646.1 1130802 D 563041 CDS YP_002266647.1 208434981 6963932 1132262..1133224 1 NC_011333.1 putative type II DNA modification enzyme 1133224 6963932 HPG27_1028 Helicobacter pylori G27 putative type II DNA modification enzyme YP_002266647.1 1132262 D 563041 CDS YP_002266648.1 208434982 6963933 1133224..1133772 1 NC_011333.1 hypothetical protein 1133772 6963933 HPG27_1029 Helicobacter pylori G27 hypothetical protein YP_002266648.1 1133224 D 563041 CDS YP_002266649.1 208434983 6963934 1133821..1134474 1 NC_011333.1 hypothetical protein 1134474 6963934 HPG27_1030 Helicobacter pylori G27 hypothetical protein YP_002266649.1 1133821 D 563041 CDS YP_002266650.1 208434984 6963935 1134471..1135598 1 NC_011333.1 spore coat polysaccharide biosynthesis protein C 1135598 6963935 HPG27_1031 Helicobacter pylori G27 spore coat polysaccharide biosynthesis protein C YP_002266650.1 1134471 D 563041 CDS YP_002266651.1 208434985 6963937 1135922..1136947 1 NC_011333.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 1136947 nrdF 6963937 nrdF Helicobacter pylori G27 ribonucleotide-diphosphate reductase subunit beta YP_002266651.1 1135922 D 563041 CDS YP_002266652.1 208434986 6963938 1136957..1137586 1 NC_011333.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 1137586 pcm 6963938 pcm Helicobacter pylori G27 protein-L-isoaspartate O-methyltransferase YP_002266652.1 1136957 D 563041 CDS YP_002266653.1 208434987 6963939 1137597..1138634 1 NC_011333.1 hypothetical protein 1138634 6963939 HPG27_1034 Helicobacter pylori G27 hypothetical protein YP_002266653.1 1137597 D 563041 CDS YP_002266654.1 208434988 6963940 1138635..1139363 1 NC_011333.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 1139363 truA 6963940 truA Helicobacter pylori G27 tRNA pseudouridine synthase A YP_002266654.1 1138635 D 563041 CDS YP_002266655.1 208434989 6963941 complement(1139357..1140391) 1 NC_011333.1 UDP-glucose4-epimerase 1140391 6963941 HPG27_1036 Helicobacter pylori G27 UDP-glucose4-epimerase YP_002266655.1 1139357 R 563041 CDS YP_002266656.1 208434990 6963944 1141105..1142640 1 NC_011333.1 putative outer membrane protein 1142640 6963944 HPG27_1037 Helicobacter pylori G27 putative outer membrane protein YP_002266656.1 1141105 D 563041 CDS YP_002266657.1 208434991 6963945 1142658..1143419 1 NC_011333.1 short chain alcohol dehydrogenase 1143419 6963945 HPG27_1038 Helicobacter pylori G27 short chain alcohol dehydrogenase YP_002266657.1 1142658 D 563041 CDS YP_002266658.1 208434992 6963946 complement(1143603..1144475) 1 NC_011333.1 cysteine-rich protein C 1144475 6963946 HPG27_1039 Helicobacter pylori G27 cysteine-rich protein C YP_002266658.1 1143603 R 563041 CDS YP_002266659.1 208434993 6963947 complement(1144550..1145170) 1 NC_011333.1 2-keto-3-deoxy-6-phosphogluconate aldolase 1145170 6963947 HPG27_1040 Helicobacter pylori G27 2-keto-3-deoxy-6-phosphogluconate aldolase YP_002266659.1 1144550 R 563041 CDS YP_002266660.1 208434994 6963948 complement(1145189..1147015) 1 NC_011333.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; phosphogluconate dehydratase 1147015 6963948 HPG27_1041 Helicobacter pylori G27 phosphogluconate dehydratase YP_002266660.1 1145189 R 563041 CDS YP_002266661.1 208434995 6963949 1147081..1148358 1 NC_011333.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate 1-dehydrogenase 1148358 6963949 HPG27_1042 Helicobacter pylori G27 glucose-6-phosphate 1-dehydrogenase YP_002266661.1 1147081 D 563041 CDS YP_002266662.1 208434996 6963950 1148368..1149051 1 NC_011333.1 glucose-6-phosphate1-dehydrogenase 1149051 6963950 HPG27_1043 Helicobacter pylori G27 glucose-6-phosphate1-dehydrogenase YP_002266662.1 1148368 D 563041 CDS YP_002266663.1 208434997 6963951 1149104..1150048 1 NC_011333.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; glucokinase 1150048 glk 6963951 glk Helicobacter pylori G27 glucokinase YP_002266663.1 1149104 D 563041 CDS YP_002266664.1 208434998 6963952 1150218..1151264 1 NC_011333.1 mannitol dehydrogenase 1151264 6963952 HPG27_1045 Helicobacter pylori G27 mannitol dehydrogenase YP_002266664.1 1150218 D 563041 CDS YP_002266665.1 208434999 6963953 complement(1151277..1152575) 1 NC_011333.1 putative lipopolysaccharide biosynthesis protein 1152575 6963953 HPG27_1046 Helicobacter pylori G27 putative lipopolysaccharide biosynthesis protein YP_002266665.1 1151277 R 563041 CDS YP_002266666.1 208435000 6963954 1152599..1152766 1 NC_011333.1 hypothetical protein 1152766 6963954 HPG27_1047 Helicobacter pylori G27 hypothetical protein YP_002266666.1 1152599 D 563041 CDS YP_002266667.1 208435001 6963955 1152763..1154070 1 NC_011333.1 hypothetical protein 1154070 6963955 HPG27_1048 Helicobacter pylori G27 hypothetical protein YP_002266667.1 1152763 D 563041 CDS YP_002266668.1 208435002 6963956 complement(1154077..1154739) 1 NC_011333.1 outer membrane protein 1154739 horH 6963956 horH Helicobacter pylori G27 outer membrane protein YP_002266668.1 1154077 R 563041 CDS YP_002266669.1 208435003 6963957 1155029..1155589 1 NC_011333.1 pyruvate flavodoxin oxidoreductase subunit gamma 1155589 6963957 HPG27_1050 Helicobacter pylori G27 pyruvate flavodoxin oxidoreductase subunit gamma YP_002266669.1 1155029 D 563041 CDS YP_002266670.1 208435004 6963958 1155605..1155997 1 NC_011333.1 pyruvate flavodoxin oxidoreductase subunit delta 1155997 porD 6963958 porD Helicobacter pylori G27 pyruvate flavodoxin oxidoreductase subunit delta YP_002266670.1 1155605 D 563041 CDS YP_002266671.1 208435005 6963959 1156007..1157230 1 NC_011333.1 pyruvate flavodoxin oxidoreductase subunit alpha 1157230 porA 6963959 porA Helicobacter pylori G27 pyruvate flavodoxin oxidoreductase subunit alpha YP_002266671.1 1156007 D 563041 CDS YP_002266672.1 208435006 6963960 1157244..1158188 1 NC_011333.1 pyruvate ferredoxin oxidoreductase subunit beta 1158188 6963960 HPG27_1053 Helicobacter pylori G27 pyruvate ferredoxin oxidoreductase subunit beta YP_002266672.1 1157244 D 563041 CDS YP_002266673.1 208435007 6963961 1158298..1159620 1 NC_011333.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1159620 6963961 HPG27_1054 Helicobacter pylori G27 adenylosuccinate lyase YP_002266673.1 1158298 D 563041 CDS YP_002266674.1 208435008 6963962 1159686..1160519 1 NC_011333.1 outer membrane protein 1160519 horI 6963962 horI Helicobacter pylori G27 outer membrane protein YP_002266674.1 1159686 D 563041 CDS YP_002266675.1 208435009 6963963 complement(1160530..1162521) 1 NC_011333.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1162521 uvrB 6963963 uvrB Helicobacter pylori G27 excinuclease ABC subunit B YP_002266675.1 1160530 R 563041 CDS YP_002266676.1 208435010 6963964 complement(1162547..1163374) 1 NC_011333.1 hypothetical protein 1163374 6963964 HPG27_1057 Helicobacter pylori G27 hypothetical protein YP_002266676.1 1162547 R 563041 CDS YP_002266677.1 208435011 6963966 complement(1166001..1166267) 1 NC_011333.1 hypothetical protein 1166267 6963966 HPG27_1059 Helicobacter pylori G27 hypothetical protein YP_002266677.1 1166001 R 563041 CDS YP_002266678.1 208435012 6963967 1166450..1166671 1 NC_011333.1 hypothetical protein 1166671 6963967 HPG27_1060 Helicobacter pylori G27 hypothetical protein YP_002266678.1 1166450 D 563041 CDS YP_002266679.1 208435013 6963968 complement(1166692..1167462) 1 NC_011333.1 cysteine-rich protein X 1167462 6963968 HPG27_1061 Helicobacter pylori G27 cysteine-rich protein X YP_002266679.1 1166692 R 563041 CDS YP_002266680.1 208435014 6963969 1167532..1167702 1 NC_011333.1 hypothetical protein 1167702 6963969 HPG27_1062 Helicobacter pylori G27 hypothetical protein YP_002266680.1 1167532 D 563041 CDS YP_002266681.1 208435015 6963970 complement(1167730..1169433) 1 NC_011333.1 gamma-glutamyl transpeptidase 1169433 6963970 HPG27_1063 Helicobacter pylori G27 gamma-glutamyl transpeptidase YP_002266681.1 1167730 R 563041 CDS YP_002266682.1 208435016 6963971 complement(1169628..1171448) 1 NC_011333.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 1171448 flgK 6963971 flgK Helicobacter pylori G27 flagellar hook-associated protein FlgK YP_002266682.1 1169628 R 563041 CDS YP_002266683.1 208435017 6963972 complement(1171450..1171884) 1 NC_011333.1 hypothetical protein 1171884 6963972 HPG27_1065 Helicobacter pylori G27 hypothetical protein YP_002266683.1 1171450 R 563041 CDS YP_002266684.1 208435018 6963973 complement(1172002..1172958) 1 NC_011333.1 type II DNA modification enzyme 1172958 6963973 HPG27_1066 Helicobacter pylori G27 type II DNA modification enzyme YP_002266684.1 1172002 R 563041 CDS YP_002266685.1 208435019 6963974 complement(1173094..1173297) 1 NC_011333.1 flgM protein 1173297 6963974 HPG27_1067 Helicobacter pylori G27 flgM protein YP_002266685.1 1173094 R 563041 CDS YP_002266686.1 208435020 6963975 complement(1173361..1173567) 1 NC_011333.1 hypothetical protein 1173567 6963975 HPG27_1068 Helicobacter pylori G27 hypothetical protein YP_002266686.1 1173361 R 563041 CDS YP_002266687.1 208435021 6963976 complement(1173599..1174117) 1 NC_011333.1 peptidyl-prolylcis-transisomerase 1174117 6963976 HPG27_1069 Helicobacter pylori G27 peptidyl-prolylcis-transisomerase YP_002266687.1 1173599 R 563041 CDS YP_002266688.1 208435022 6963977 complement(1174143..1175132) 1 NC_011333.1 periplasmic protein 1175132 6963977 HPG27_1070 Helicobacter pylori G27 periplasmic protein YP_002266688.1 1174143 R 563041 CDS YP_002266689.1 208435023 6963978 complement(1175140..1175679) 1 NC_011333.1 peptidoglycan-associated lipoprotein 1175679 6963978 HPG27_1071 Helicobacter pylori G27 peptidoglycan-associated lipoprotein YP_002266689.1 1175140 R 563041 CDS YP_002266690.1 208435024 6963979 complement(1175746..1176999) 1 NC_011333.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 1176999 tolB 6963979 tolB Helicobacter pylori G27 translocation protein TolB YP_002266690.1 1175746 R 563041 CDS YP_002266691.1 208435025 6963980 complement(1176996..1177820) 1 NC_011333.1 hypothetical protein 1177820 6963980 HPG27_1073 Helicobacter pylori G27 hypothetical protein YP_002266691.1 1176996 R 563041 CDS YP_002266692.1 208435026 6963981 complement(1177839..1178240) 1 NC_011333.1 biopolymer transport protein 1178240 6963981 HPG27_1074 Helicobacter pylori G27 biopolymer transport protein YP_002266692.1 1177839 R 563041 CDS YP_002266693.1 208435027 6963982 complement(1178293..1178862) 1 NC_011333.1 biopolymer transport protein 1178862 6963982 HPG27_1075 Helicobacter pylori G27 biopolymer transport protein YP_002266693.1 1178293 R 563041 CDS YP_002266694.1 208435028 6963983 complement(1178873..1179244) 1 NC_011333.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; F0F1 ATP synthase subunit epsilon 1179244 atpC 6963983 atpC Helicobacter pylori G27 F0F1 ATP synthase subunit epsilon YP_002266694.1 1178873 R 563041 CDS YP_002266695.1 208435029 6963984 complement(1179255..1180664) 1 NC_011333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; F0F1 ATP synthase subunit beta 1180664 6963984 HPG27_1077 Helicobacter pylori G27 F0F1 ATP synthase subunit beta YP_002266695.1 1179255 R 563041 CDS YP_002266696.1 208435030 6963985 complement(1180687..1181592) 1 NC_011333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; F0F1 ATP synthase subunit gamma 1181592 6963985 HPG27_1078 Helicobacter pylori G27 F0F1 ATP synthase subunit gamma YP_002266696.1 1180687 R 563041 CDS YP_002266697.1 208435031 6963986 complement(1181607..1183118) 1 NC_011333.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; F0F1 ATP synthase subunit alpha 1183118 6963986 HPG27_1079 Helicobacter pylori G27 F0F1 ATP synthase subunit alpha YP_002266697.1 1181607 R 563041 CDS YP_002266698.1 208435032 6963987 complement(1183141..1183683) 1 NC_011333.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; F0F1 ATP synthase subunit delta 1183683 6963987 HPG27_1080 Helicobacter pylori G27 F0F1 ATP synthase subunit delta YP_002266698.1 1183141 R 563041 CDS YP_002266699.1 208435033 6963988 complement(1183684..1184199) 1 NC_011333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; F0F1 ATP synthase subunit B 1184199 6963988 HPG27_1081 Helicobacter pylori G27 F0F1 ATP synthase subunit B YP_002266699.1 1183684 R 563041 CDS YP_002266700.1 208435034 6963989 complement(1184203..1184637) 1 NC_011333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; F0F1 ATP synthase subunit B' 1184637 6963989 HPG27_1082 Helicobacter pylori G27 F0F1 ATP synthase subunit B' YP_002266700.1 1184203 R 563041 CDS YP_002266701.1 208435035 6963990 complement(1184747..1185619) 1 NC_011333.1 plasmid replication-partition-like protein 1185619 6963990 HPG27_1083 Helicobacter pylori G27 plasmid replication-partition-like protein YP_002266701.1 1184747 R 563041 CDS YP_002266702.1 208435036 6963991 complement(1185622..1186416) 1 NC_011333.1 spoOJ regulator 1186416 6963991 HPG27_1084 Helicobacter pylori G27 spoOJ regulator YP_002266702.1 1185622 R 563041 CDS YP_002266703.1 208435037 6963992 complement(1186419..1187057) 1 NC_011333.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 1187057 6963992 HPG27_1085 Helicobacter pylori G27 biotin--protein ligase YP_002266703.1 1186419 R 563041 CDS YP_002266704.1 208435038 6963993 complement(1187054..1187950) 1 NC_011333.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 1187950 fmt 6963993 fmt Helicobacter pylori G27 methionyl-tRNA formyltransferase YP_002266704.1 1187054 R 563041 CDS YP_002266705.1 208435039 6963995 complement(1190503..1191801) 1 NC_011333.1 hypothetical protein 1191801 6963995 HPG27_1088 Helicobacter pylori G27 hypothetical protein YP_002266705.1 1190503 R 563041 CDS YP_002266706.1 208435040 6963996 1192129..1192464 1 NC_011333.1 hypothetical protein 1192464 6963996 HPG27_1089 Helicobacter pylori G27 hypothetical protein YP_002266706.1 1192129 D 563041 CDS YP_002266707.1 208435041 6963998 complement(1195000..1195887) 1 NC_011333.1 hypothetical protein 1195887 6963998 HPG27_1090 Helicobacter pylori G27 hypothetical protein YP_002266707.1 1195000 R 563041 CDS YP_002266708.1 208435042 6963999 complement(1196159..1196515) 1 NC_011333.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 1196515 rplS 6963999 rplS Helicobacter pylori G27 50S ribosomal protein L19 YP_002266708.1 1196159 R 563041 CDS YP_002266709.1 208435043 6964000 complement(1196537..1197226) 1 NC_011333.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 1197226 trmD 6964000 trmD Helicobacter pylori G27 tRNA (guanine-N(1)-)-methyltransferase YP_002266709.1 1196537 R 563041 CDS YP_002266710.1 208435044 6964001 complement(1197227..1197781) 1 NC_011333.1 Essential for efficient processing of 16S rRNA; 16S rRNA-processing protein RimM 1197781 rimM 6964001 rimM Helicobacter pylori G27 16S rRNA-processing protein RimM YP_002266710.1 1197227 R 563041 CDS YP_002266711.1 208435045 6964002 complement(1197782..1198129) 1 NC_011333.1 hypothetical protein 1198129 6964002 HPG27_1094 Helicobacter pylori G27 hypothetical protein YP_002266711.1 1197782 R 563041 CDS YP_002266712.1 208435046 6964003 complement(1198146..1198373) 1 NC_011333.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 1198373 rpsP 6964003 rpsP Helicobacter pylori G27 30S ribosomal protein S16 YP_002266712.1 1198146 R 563041 CDS YP_002266713.1 208435047 6964004 complement(1198447..1199793) 1 NC_011333.1 signal recognition particle protein 1199793 6964004 HPG27_1096 Helicobacter pylori G27 signal recognition particle protein YP_002266713.1 1198447 R 563041 CDS YP_002266714.1 208435048 6964005 complement(1199808..1202426) 1 NC_011333.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 1202426 valS 6964005 valS Helicobacter pylori G27 valyl-tRNA synthetase YP_002266714.1 1199808 R 563041 CDS YP_002266715.1 208435049 6964006 1202563..1202970 1 NC_011333.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 1202970 6964006 HPG27_1098 Helicobacter pylori G27 flagellar assembly protein FliW YP_002266715.1 1202563 D 563041 CDS YP_002266716.1 208435050 6964007 1202982..1204043 1 NC_011333.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 1204043 murG 6964007 murG Helicobacter pylori G27 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_002266716.1 1202982 D 563041 CDS YP_002266717.1 208435051 6964008 1204152..1206236 1 NC_011333.1 outer membrane protein 1206236 hopI 6964008 hopI Helicobacter pylori G27 outer membrane protein YP_002266717.1 1204152 D 563041 CDS YP_002266718.1 208435052 6964010 1209956..1210729 1 NC_011333.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 1210729 6964010 HPG27_1102 Helicobacter pylori G27 pyrroline-5-carboxylate reductase YP_002266718.1 1209956 D 563041 CDS YP_002266719.1 208435053 6964011 1210756..1211289 1 NC_011333.1 cell filamentation protein 1211289 6964011 HPG27_1103 Helicobacter pylori G27 cell filamentation protein YP_002266719.1 1210756 D 563041 CDS YP_002266720.1 208435054 6964012 complement(1211525..1211953) 1 NC_011333.1 putative metalloprotease 1211953 6964012 HPG27_1104 Helicobacter pylori G27 putative metalloprotease YP_002266720.1 1211525 R 563041 CDS YP_002266721.1 208435055 6964013 complement(1212007..1212501) 1 NC_011333.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 1212501 6964013 HPG27_1105 Helicobacter pylori G27 flavodoxin FldA YP_002266721.1 1212007 R 563041 CDS YP_002266722.1 208435056 6964014 complement(1212593..1213174) 1 NC_011333.1 hypothetical protein 1213174 6964014 HPG27_1106 Helicobacter pylori G27 hypothetical protein YP_002266722.1 1212593 R 563041 CDS YP_002266723.1 208435057 6964015 1213308..1213505 1 NC_011333.1 cation transport subunit forcbb3-type oxidase 1213505 6964015 HPG27_1107 Helicobacter pylori G27 cation transport subunit forcbb3-type oxidase YP_002266723.1 1213308 D 563041 CDS YP_002266724.1 208435058 6964016 1213531..1214505 1 NC_011333.1 thioredoxin reductase 1214505 6964016 HPG27_1108 Helicobacter pylori G27 thioredoxin reductase YP_002266724.1 1213531 D 563041 CDS YP_002266725.1 208435059 6964017 complement(1214512..1215672) 1 NC_011333.1 tetracycline resistance proteintet A (P ) 1215672 6964017 HPG27_1109 Helicobacter pylori G27 tetracycline resistance proteintet A (P ) YP_002266725.1 1214512 R 563041 CDS YP_002266726.1 208435060 6964018 1215736..1217373 1 NC_011333.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; glucose-6-phosphate isomerase 1217373 pgi 6964018 pgi Helicobacter pylori G27 glucose-6-phosphate isomerase YP_002266726.1 1215736 D 563041 CDS YP_002266727.1 208435061 6964019 1217680..1219080 1 NC_011333.1 outer membrane protein 1219080 hofH 6964019 hofH Helicobacter pylori G27 outer membrane protein YP_002266727.1 1217680 D 563041 CDS YP_002266728.1 208435062 6964020 complement(1219400..1221463) 1 NC_011333.1 carbon starvation protein 1221463 6964020 HPG27_1112 Helicobacter pylori G27 carbon starvation protein YP_002266728.1 1219400 R 563041 CDS YP_002266729.1 208435063 6964021 1221673..1222326 1 NC_011333.1 glutamine ABC transporter permease 1222326 6964021 HPG27_1113 Helicobacter pylori G27 glutamine ABC transporter permease YP_002266729.1 1221673 D 563041 CDS YP_002266730.1 208435064 6964022 1222328..1222999 1 NC_011333.1 glutamine ABC transporter permease 1222999 6964022 HPG27_1114 Helicobacter pylori G27 glutamine ABC transporter permease YP_002266730.1 1222328 D 563041 CDS YP_002266731.1 208435065 6964023 1223001..1223747 1 NC_011333.1 glutamine ABC transporter ATP-binding protein 1223747 6964023 HPG27_1115 Helicobacter pylori G27 glutamine ABC transporter ATP-binding protein YP_002266731.1 1223001 D 563041 CDS YP_002266732.1 208435066 6964024 1223796..1224629 1 NC_011333.1 glutamine ABC transporter periplasmic glutamine-binding protein 1224629 6964024 HPG27_1116 Helicobacter pylori G27 glutamine ABC transporter periplasmic glutamine-binding protein YP_002266732.1 1223796 D 563041 CDS YP_002266733.1 208435067 6964025 1224750..1225301 1 NC_011333.1 hypothetical protein 1225301 6964025 HPG27_1117 Helicobacter pylori G27 hypothetical protein YP_002266733.1 1224750 D 563041 CDS YP_002266734.1 208435068 6964026 complement(1225563..1226786) 1 NC_011333.1 glucose/galactose transporter 1226786 6964026 HPG27_1118 Helicobacter pylori G27 glucose/galactose transporter YP_002266734.1 1225563 R 563041 CDS YP_002266735.1 208435069 6964027 complement(1226915..1228222) 1 NC_011333.1 hypothetical protein 1228222 6964027 HPG27_1119 Helicobacter pylori G27 hypothetical protein YP_002266735.1 1226915 R 563041 CDS YP_002266736.1 208435070 6964028 complement(1228696..1230621) 1 NC_011333.1 outer membrane protein 1230621 hopQ 6964028 hopQ Helicobacter pylori G27 outer membrane protein YP_002266736.1 1228696 R 563041 CDS YP_002266737.1 208435071 6964029 complement(1231083..1231784) 1 NC_011333.1 purine-nucleoside phosphorylase 1231784 6964029 HPG27_1121 Helicobacter pylori G27 purine-nucleoside phosphorylase YP_002266737.1 1231083 R 563041 CDS YP_002266738.1 208435072 6964030 complement(1231781..1233022) 1 NC_011333.1 catalyzes the transfer of phosphate between the C1 and C5 carbons of pentose; phosphopentomutase 1233022 6964030 HPG27_1122 Helicobacter pylori G27 phosphopentomutase YP_002266738.1 1231781 R 563041 CDS YP_002266739.1 208435073 6964031 complement(1233034..1234290) 1 NC_011333.1 pyrimidine nucleoside transport protein 1234290 6964031 HPG27_1123 Helicobacter pylori G27 pyrimidine nucleoside transport protein YP_002266739.1 1233034 R 563041 CDS YP_002266740.1 208435074 6964033 1234724..1235941 1 NC_011333.1 multidrug-efflux transporter 1235941 6964033 HPG27_1124 Helicobacter pylori G27 multidrug-efflux transporter YP_002266740.1 1234724 D 563041 CDS YP_002266741.1 208435075 6964034 1235960..1236721 1 NC_011333.1 hypothetical protein 1236721 6964034 HPG27_1125 Helicobacter pylori G27 hypothetical protein YP_002266741.1 1235960 D 563041 CDS YP_002266742.1 208435076 6964035 complement(1236730..1237881) 1 NC_011333.1 Na+/H+ antiporter 1237881 6964035 HPG27_1126 Helicobacter pylori G27 Na+/H+ antiporter YP_002266742.1 1236730 R 563041 CDS YP_002266743.1 208435077 6964036 complement(1237907..1239286) 1 NC_011333.1 hypothetical protein 1239286 6964036 HPG27_1127 Helicobacter pylori G27 hypothetical protein YP_002266743.1 1237907 R 563041 CDS YP_002266744.1 208435078 6964037 complement(1239455..1240630) 1 NC_011333.1 sugar efflux transporter 1240630 6964037 HPG27_1128 Helicobacter pylori G27 sugar efflux transporter YP_002266744.1 1239455 R 563041 CDS YP_002266745.1 208435079 6964038 1240904..1241647 1 NC_011333.1 alpha-carbonic anhydrase 1241647 6964038 HPG27_1129 Helicobacter pylori G27 alpha-carbonic anhydrase YP_002266745.1 1240904 D 563041 CDS YP_002266746.1 208435080 6964039 complement(1241877..1242836) 1 NC_011333.1 hypothetical protein 1242836 6964039 HPG27_1130 Helicobacter pylori G27 hypothetical protein YP_002266746.1 1241877 R 563041 CDS YP_002266747.1 208435081 6964040 complement(1243113..1244351) 1 NC_011333.1 hypothetical protein 1244351 6964040 HPG27_1131 Helicobacter pylori G27 hypothetical protein YP_002266747.1 1243113 R 563041 CDS YP_002266748.1 208435082 6964041 complement(1244628..1245737) 1 NC_011333.1 hypothetical protein 1245737 6964041 HPG27_1132 Helicobacter pylori G27 hypothetical protein YP_002266748.1 1244628 R 563041 CDS YP_002266749.1 208435083 6964042 complement(1246014..1247198) 1 NC_011333.1 hypothetical protein 1247198 6964042 HPG27_1133 Helicobacter pylori G27 hypothetical protein YP_002266749.1 1246014 R 563041 CDS YP_002266750.1 208435084 6964043 complement(1247631..1248437) 1 NC_011333.1 aspartate-semialdehyde dehydrogenase 1248437 6964043 HPG27_1134 Helicobacter pylori G27 aspartate-semialdehyde dehydrogenase YP_002266750.1 1247631 R 563041 CDS YP_002266751.1 208435085 6964044 complement(1248658..1249986) 1 NC_011333.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1249986 hisS 6964044 hisS Helicobacter pylori G27 histidyl-tRNA synthetase YP_002266751.1 1248658 R 563041 CDS YP_002266752.1 208435086 6964045 1250048..1251097 1 NC_011333.1 ADP-heptose-LPS heptosyltransferase II 1251097 6964045 HPG27_1136 Helicobacter pylori G27 ADP-heptose-LPS heptosyltransferase II YP_002266752.1 1250048 D 563041 CDS YP_002266753.1 208435087 6964046 complement(1251286..1251720) 1 NC_011333.1 hypothetical protein 1251720 6964046 HPG27_1137 Helicobacter pylori G27 hypothetical protein YP_002266753.1 1251286 R 563041 CDS YP_002266754.1 208435088 6964047 1251938..1252927 1 NC_011333.1 aldo-ketoreductase 1252927 6964047 HPG27_1138 Helicobacter pylori G27 aldo-ketoreductase YP_002266754.1 1251938 D 563041 CDS YP_002266755.1 208435089 6964048 complement(1253443..1255521) 1 NC_011333.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 1255521 6964048 HPG27_1139 Helicobacter pylori G27 elongation factor G YP_002266755.1 1253443 R 563041 CDS YP_002266756.2 394894915 6964049 complement(1255533..1256000) 1 NC_011333.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 1256000 6964049 HPG27_1140 Helicobacter pylori G27 30S ribosomal protein S7 YP_002266756.2 1255533 R 563041 CDS YP_002266757.1 208435091 6964050 complement(1256016..1256423) 1 NC_011333.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 1256423 rpsL 6964050 rpsL Helicobacter pylori G27 30S ribosomal protein S12 YP_002266757.1 1256016 R 563041 CDS YP_002266758.1 208435092 6964051 complement(1256512..1264929) 1 NC_011333.1 DNA-directed RNA polymerase subunit beta 1264929 6964051 HPG27_1142 Helicobacter pylori G27 DNA-directed RNA polymerase subunit beta YP_002266758.1 1256512 R 563041 CDS YP_002266759.1 208435093 6964052 complement(1264980..1265183) 1 NC_011333.1 DNA-directed RNA polymerase subunit beta 1265183 6964052 HPG27_1143 Helicobacter pylori G27 DNA-directed RNA polymerase subunit beta YP_002266759.1 1264980 R 563041 CDS YP_002266760.1 208435094 6964053 1265195..1265401 1 NC_011333.1 hypothetical protein 1265401 6964053 HPG27_1144 Helicobacter pylori G27 hypothetical protein YP_002266760.1 1265195 D 563041 CDS YP_002266761.1 208435095 6964054 complement(1265405..1265782) 1 NC_011333.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 1265782 rplL 6964054 rplL Helicobacter pylori G27 50S ribosomal protein L7/L12 YP_002266761.1 1265405 R 563041 CDS YP_002266762.1 208435096 6964055 complement(1265824..1266318) 1 NC_011333.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 1266318 rplJ 6964055 rplJ Helicobacter pylori G27 50S ribosomal protein L10 YP_002266762.1 1265824 R 563041 CDS YP_002266763.1 208435097 6964056 complement(1266427..1267131) 1 NC_011333.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 1267131 rplA 6964056 rplA Helicobacter pylori G27 50S ribosomal protein L1 YP_002266763.1 1266427 R 563041 CDS YP_002266764.1 208435098 6964057 complement(1267176..1267601) 1 NC_011333.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 1267601 rplK 6964057 rplK Helicobacter pylori G27 50S ribosomal protein L11 YP_002266764.1 1267176 R 563041 CDS YP_002266765.1 208435099 6964058 complement(1267619..1268149) 1 NC_011333.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 1268149 nusG 6964058 nusG Helicobacter pylori G27 transcription antitermination protein NusG YP_002266765.1 1267619 R 563041 CDS YP_002266766.1 208435100 6964059 complement(1268176..1268355) 1 NC_011333.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 1268355 secE 6964059 secE Helicobacter pylori G27 preprotein translocase subunit SecE YP_002266766.1 1268176 R 563041 CDS YP_002266767.1 208435101 6964061 complement(1268612..1268770) 1 NC_011333.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 1268770 rpmG 6964061 rpmG Helicobacter pylori G27 50S ribosomal protein L33 YP_002266767.1 1268612 R 563041 CDS YP_002266768.1 208435102 6964062 complement(1268804..1270003) 1 NC_011333.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 1270003 6964062 HPG27_1152 Helicobacter pylori G27 elongation factor Tu YP_002266768.1 1268804 R 563041 CDS YP_002266769.1 208435103 6964067 1270700..1272436 1 NC_011333.1 ABC transporter ATP-binding protein 1272436 6964067 HPG27_1153 Helicobacter pylori G27 ABC transporter ATP-binding protein YP_002266769.1 1270700 D 563041 CDS YP_002266770.1 208435104 6964068 complement(1272445..1273113) 1 NC_011333.1 hypothetical protein 1273113 6964068 HPG27_1154 Helicobacter pylori G27 hypothetical protein YP_002266770.1 1272445 R 563041 CDS YP_002266771.1 208435105 6964069 complement(1273216..1274205) 1 NC_011333.1 type II adenine specific DNA methyltransferase 1274205 6964069 HPG27_1155 Helicobacter pylori G27 type II adenine specific DNA methyltransferase YP_002266771.1 1273216 R 563041 CDS YP_002266772.1 208435106 6964070 complement(1274533..1274817) 1 NC_011333.1 hypothetical protein 1274817 6964070 HPG27_1156 Helicobacter pylori G27 hypothetical protein YP_002266772.1 1274533 R 563041 CDS YP_002266773.1 208435107 6964071 complement(1275032..1275520) 1 NC_011333.1 serine acetyl transferase 1275520 6964071 HPG27_1157 Helicobacter pylori G27 serine acetyl transferase YP_002266773.1 1275032 R 563041 CDS YP_002266774.1 208435108 6964074 complement(1276166..1276483) 1 NC_011333.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; F0F1 ATP synthase subunit C 1276483 6964074 HPG27_1158 Helicobacter pylori G27 F0F1 ATP synthase subunit C YP_002266774.1 1276166 R 563041 CDS YP_002266775.1 208435109 6964075 complement(1276616..1278682) 1 NC_011333.1 polynucleotide phosphorylase/polyadenylase 1278682 6964075 HPG27_1159 Helicobacter pylori G27 polynucleotide phosphorylase/polyadenylase YP_002266775.1 1276616 R 563041 CDS YP_002266776.1 208435110 6964076 complement(1278685..1279389) 1 NC_011333.1 hypothetical protein 1279389 6964076 HPG27_1160 Helicobacter pylori G27 hypothetical protein YP_002266776.1 1278685 R 563041 CDS YP_002266777.1 208435111 6964077 complement(1279404..1281665) 1 NC_011333.1 organic solvent tolerance protein 1281665 6964077 HPG27_1161 Helicobacter pylori G27 organic solvent tolerance protein YP_002266777.1 1279404 R 563041 CDS YP_002266778.1 208435112 6964078 complement(1281668..1282147) 1 NC_011333.1 hypothetical protein 1282147 6964078 HPG27_1162 Helicobacter pylori G27 hypothetical protein YP_002266778.1 1281668 R 563041 CDS YP_002266779.1 208435113 6964079 complement(1282196..1283470) 1 NC_011333.1 glycinamide ribonucleotide synthetase 1283470 6964079 HPG27_1163 Helicobacter pylori G27 glycinamide ribonucleotide synthetase YP_002266779.1 1282196 R 563041 CDS YP_002266780.1 208435114 6964080 complement(1283783..1284448) 1 NC_011333.1 ABC transporter ATP-binding protein 1284448 6964080 HPG27_1164 Helicobacter pylori G27 ABC transporter ATP-binding protein YP_002266780.1 1283783 R 563041 CDS YP_002266781.1 208435115 6964081 complement(1284463..1285167) 1 NC_011333.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; undecaprenyl pyrophosphate synthase 1285167 6964081 HPG27_1165 Helicobacter pylori G27 undecaprenyl pyrophosphate synthase YP_002266781.1 1284463 R 563041 CDS YP_002266782.1 208435116 6964082 complement(1285207..1288047) 1 NC_011333.1 D-lactate dehydrogenase 1288047 6964082 HPG27_1166 Helicobacter pylori G27 D-lactate dehydrogenase YP_002266782.1 1285207 R 563041 CDS YP_002266783.1 208435117 6964083 1288119..1288451 1 NC_011333.1 hypothetical protein 1288451 6964083 HPG27_1167 Helicobacter pylori G27 hypothetical protein YP_002266783.1 1288119 D 563041 CDS YP_002266784.1 208435118 6964084 1288454..1289134 1 NC_011333.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 1289134 hemD 6964084 hemD Helicobacter pylori G27 uroporphyrinogen-III synthase YP_002266784.1 1288454 D 563041 CDS YP_002266785.1 208435119 6964085 1289181..1289573 1 NC_011333.1 may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; camphor resistance protein CrcB 1289573 6964085 HPG27_1169 Helicobacter pylori G27 camphor resistance protein CrcB YP_002266785.1 1289181 D 563041 CDS YP_002266786.1 208435120 6964086 complement(1289620..1290657) 1 NC_011333.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 1290657 6964086 HPG27_1170 Helicobacter pylori G27 coproporphyrinogen III oxidase YP_002266786.1 1289620 R 563041 CDS YP_002266787.1 208435121 6964087 1290754..1291044 1 NC_011333.1 cytochrome c 553 1291044 6964087 HPG27_1171 Helicobacter pylori G27 cytochrome c 553 YP_002266787.1 1290754 D 563041 CDS YP_002266788.1 208435122 6964088 1291205..1291672 1 NC_011333.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 1291672 6964088 HPG27_1172 Helicobacter pylori G27 dinucleoside polyphosphate hydrolase YP_002266788.1 1291205 D 563041 CDS YP_002266789.1 208435123 6964089 1291674..1292891 1 NC_011333.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 1292891 6964089 HPG27_1173 Helicobacter pylori G27 aspartate kinase YP_002266789.1 1291674 D 563041 CDS YP_002266790.1 208435124 6964090 1292888..1293430 1 NC_011333.1 hypothetical protein 1293430 6964090 HPG27_1174 Helicobacter pylori G27 hypothetical protein YP_002266790.1 1292888 D 563041 CDS YP_002266791.1 208435125 6964091 1293427..1294083 1 NC_011333.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 1294083 6964091 HPG27_1175 Helicobacter pylori G27 DNA polymerase III subunit delta' YP_002266791.1 1293427 D 563041 CDS YP_002266792.1 208435126 6964092 1294080..1295222 1 NC_011333.1 dihydropteroate synthase 1295222 6964092 HPG27_1176 Helicobacter pylori G27 dihydropteroate synthase YP_002266792.1 1294080 D 563041 CDS YP_002266793.1 208435127 6964093 complement(1295244..1295705) 1 NC_011333.1 hypothetical protein 1295705 6964093 HPG27_1177 Helicobacter pylori G27 hypothetical protein YP_002266793.1 1295244 R 563041 CDS YP_002266794.1 208435128 6964094 1296100..1296996 1 NC_011333.1 hypothetical protein 1296996 6964094 HPG27_1178 Helicobacter pylori G27 hypothetical protein YP_002266794.1 1296100 D 563041 CDS YP_002266795.1 208435129 6964095 1297000..1298247 1 NC_011333.1 hypothetical protein 1298247 6964095 HPG27_1179 Helicobacter pylori G27 hypothetical protein YP_002266795.1 1297000 D 563041 CDS YP_002266796.1 208435130 6964096 1298327..1298878 1 NC_011333.1 hypothetical protein 1298878 6964096 HPG27_1180 Helicobacter pylori G27 hypothetical protein YP_002266796.1 1298327 D 563041 CDS YP_002266797.1 208435131 6964097 1298878..1300005 1 NC_011333.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 1300005 6964097 HPG27_1181 Helicobacter pylori G27 carbamoyl phosphate synthase small subunit YP_002266797.1 1298878 D 563041 CDS YP_002266798.1 208435132 6964098 1300170..1301174 1 NC_011333.1 formamide amidohydrolase; catalyzes the hydrolysis of formamide to formate; formamidase 1301174 amiF 6964098 amiF Helicobacter pylori G27 formamidase YP_002266798.1 1300170 D 563041 CDS YP_002266799.1 208435133 6964099 complement(1301253..1301510) 1 NC_011333.1 hypothetical protein 1301510 6964099 HPG27_1183 Helicobacter pylori G27 hypothetical protein YP_002266799.1 1301253 R 563041 CDS YP_002266800.1 208435134 6964100 complement(1301625..1302197) 1 NC_011333.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Maf-like protein 1302197 6964100 HPG27_1184 Helicobacter pylori G27 Maf-like protein YP_002266800.1 1301625 R 563041 CDS YP_002266801.1 208435135 6964101 complement(1302199..1304652) 1 NC_011333.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 1304652 alaS 6964101 alaS Helicobacter pylori G27 alanyl-tRNA synthetase YP_002266801.1 1302199 R 563041 CDS YP_002266802.1 208435136 6964102 1304861..1305091 1 NC_011333.1 hypothetical protein 1305091 6964102 HPG27_1186 Helicobacter pylori G27 hypothetical protein YP_002266802.1 1304861 D 563041 CDS YP_002266803.1 208435137 6964103 complement(1305877..1307847) 1 NC_011333.1 outer membrane protein 1307847 6964103 HPG27_1187 Helicobacter pylori G27 outer membrane protein YP_002266803.1 1305877 R 563041 CDS YP_002266804.1 208435138 6964104 1307962..1308165 1 NC_011333.1 hypothetical protein 1308165 6964104 HPG27_1188 Helicobacter pylori G27 hypothetical protein YP_002266804.1 1307962 D 563041 CDS YP_002266805.1 208435139 6964105 complement(1308521..1308778) 1 NC_011333.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 1308778 rpsR 6964105 rpsR Helicobacter pylori G27 30S ribosomal protein S18 YP_002266805.1 1308521 R 563041 CDS YP_002266806.1 208435140 6964106 complement(1308801..1309346) 1 NC_011333.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 1309346 6964106 HPG27_1190 Helicobacter pylori G27 single-stranded DNA-binding protein YP_002266806.1 1308801 R 563041 CDS YP_002266807.1 208435141 6964107 complement(1309356..1309784) 1 NC_011333.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 1309784 rpsF 6964107 rpsF Helicobacter pylori G27 30S ribosomal protein S6 YP_002266807.1 1309356 R 563041 CDS YP_002266808.1 208435142 6964108 complement(1309937..1310944) 1 NC_011333.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 1310944 6964108 HPG27_1192 Helicobacter pylori G27 DNA polymerase III subunit delta YP_002266808.1 1309937 R 563041 CDS YP_002266809.1 208435143 6964109 complement(1310949..1312883) 1 NC_011333.1 3'-5'exoribonuclease R 1312883 6964109 HPG27_1193 Helicobacter pylori G27 3'-5'exoribonuclease R YP_002266809.1 1310949 R 563041 CDS YP_002266810.1 208435144 6964110 complement(1312883..1313674) 1 NC_011333.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1313674 aroE 6964110 aroE Helicobacter pylori G27 shikimate 5-dehydrogenase YP_002266810.1 1312883 R 563041 CDS YP_002266811.1 208435145 6964111 complement(1313682..1314272) 1 NC_011333.1 hypothetical protein 1314272 6964111 HPG27_1195 Helicobacter pylori G27 hypothetical protein YP_002266811.1 1313682 R 563041 CDS YP_002266812.1 208435146 6964112 complement(1314281..1315327) 1 NC_011333.1 oligopeptide ABC transporter permease 1315327 6964112 HPG27_1196 Helicobacter pylori G27 oligopeptide ABC transporter permease YP_002266812.1 1314281 R 563041 CDS YP_002266813.1 208435147 6964114 complement(1317107..1318087) 1 NC_011333.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 1318087 6964114 HPG27_1198 Helicobacter pylori G27 tryptophanyl-tRNA synthetase YP_002266813.1 1317107 R 563041 CDS YP_002266814.1 208435148 6964115 complement(1318158..1318880) 1 NC_011333.1 biotin synthesis protein 1318880 6964115 HPG27_1199 Helicobacter pylori G27 biotin synthesis protein YP_002266814.1 1318158 R 563041 CDS YP_002266815.1 208435149 6964116 1319004..1319597 1 NC_011333.1 preprotein translocase subunit SecG 1319597 secG 6964116 secG Helicobacter pylori G27 preprotein translocase subunit SecG YP_002266815.1 1319004 D 563041 CDS YP_002266816.1 208435150 6964117 1319597..1320154 1 NC_011333.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 1320154 frr 6964117 frr Helicobacter pylori G27 ribosome recycling factor YP_002266816.1 1319597 D 563041 CDS YP_002266817.1 208435151 6964118 1320158..1320763 1 NC_011333.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1320763 pyrE 6964118 pyrE Helicobacter pylori G27 orotate phosphoribosyltransferase YP_002266817.1 1320158 D 563041 CDS YP_002266818.1 208435152 6964119 1320825..1321217 1 NC_011333.1 hypothetical protein 1321217 6964119 HPG27_1203 Helicobacter pylori G27 hypothetical protein YP_002266818.1 1320825 D 563041 CDS YP_002266819.1 208435153 6964120 1321214..1321903 1 NC_011333.1 NAD-dependent deacetylase 1321903 6964120 HPG27_1204 Helicobacter pylori G27 NAD-dependent deacetylase YP_002266819.1 1321214 D 563041 CDS YP_002266820.1 208435154 6964121 1322011..1322412 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A 1322412 6964121 HPG27_1205 Helicobacter pylori G27 NADH dehydrogenase subunit A YP_002266820.1 1322011 D 563041 CDS YP_002266821.1 208435155 6964122 1322412..1322891 1 NC_011333.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1322891 nuoB 6964122 nuoB Helicobacter pylori G27 NADH dehydrogenase subunit B YP_002266821.1 1322412 D 563041 CDS YP_002266822.1 208435156 6964123 1322891..1323688 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C 1323688 nuoC 6964123 nuoC Helicobacter pylori G27 NADH dehydrogenase subunit C YP_002266822.1 1322891 D 563041 CDS YP_002266823.1 208435157 6964124 1323690..1324919 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1324919 nuoD 6964124 nuoD Helicobacter pylori G27 NADH dehydrogenase subunit D YP_002266823.1 1323690 D 563041 CDS YP_002266824.1 208435158 6964125 1324916..1325146 1 NC_011333.1 NADH-ubiquinone oxidoreductase subunit E 1325146 6964125 HPG27_1209 Helicobacter pylori G27 NADH-ubiquinone oxidoreductase subunit E YP_002266824.1 1324916 D 563041 CDS YP_002266825.1 208435159 6964126 1325149..1326135 1 NC_011333.1 NADH-ubiquinone oxidoreductase subunit F 1326135 6964126 HPG27_1210 Helicobacter pylori G27 NADH-ubiquinone oxidoreductase subunit F YP_002266825.1 1325149 D 563041 CDS YP_002266826.1 208435160 6964127 1326132..1328696 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1328696 6964127 HPG27_1211 Helicobacter pylori G27 NADH dehydrogenase subunit G YP_002266826.1 1326132 D 563041 CDS YP_002266827.1 208435161 6964128 1328693..1329682 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1329682 6964128 HPG27_1212 Helicobacter pylori G27 NADH dehydrogenase subunit H YP_002266827.1 1328693 D 563041 CDS YP_002266828.1 208435162 6964129 1329693..1330355 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1330355 6964129 HPG27_1213 Helicobacter pylori G27 NADH dehydrogenase subunit I YP_002266828.1 1329693 D 563041 CDS YP_002266829.1 208435163 6964130 1330396..1330896 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1330896 nuoJ 6964130 nuoJ Helicobacter pylori G27 NADH dehydrogenase subunit J YP_002266829.1 1330396 D 563041 CDS YP_002266830.1 208435164 6964131 1330893..1331195 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1331195 nuoK 6964131 nuoK Helicobacter pylori G27 NADH dehydrogenase subunit K YP_002266830.1 1330893 D 563041 CDS YP_002266831.1 208435165 6964132 1331198..1333036 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1333036 nuoL 6964132 nuoL Helicobacter pylori G27 NADH dehydrogenase subunit L YP_002266831.1 1331198 D 563041 CDS YP_002266832.1 208435166 6964134 1334628..1336046 1 NC_011333.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1336046 nuoN2 6964134 nuoN2 Helicobacter pylori G27 NADH dehydrogenase subunit N YP_002266832.1 1334628 D 563041 CDS YP_002266833.1 208435167 6964135 1336066..1338441 1 NC_011333.1 paralysed flagella protein 1338441 6964135 HPG27_1219 Helicobacter pylori G27 paralysed flagella protein YP_002266833.1 1336066 D 563041 CDS YP_002266834.1 208435168 6964136 1338443..1339822 1 NC_011333.1 phosphomannomutase 1339822 6964136 HPG27_1220 Helicobacter pylori G27 phosphomannomutase YP_002266834.1 1338443 D 563041 CDS YP_002266835.1 208435169 6964137 1339999..1340259 1 NC_011333.1 hypothetical protein 1340259 6964137 HPG27_1221 Helicobacter pylori G27 hypothetical protein YP_002266835.1 1339999 D 563041 CDS YP_002266836.1 208435170 6964138 complement(1340612..1340836) 1 NC_011333.1 hypothetical protein 1340836 6964138 HPG27_1222 Helicobacter pylori G27 hypothetical protein YP_002266836.1 1340612 R 563041 CDS YP_002266837.1 208435171 6964139 complement(1341065..1341853) 1 NC_011333.1 catalyzes the formation of indole and glyceraldehyde 3-phosphate from indoleglycerol phosphate in tryptophan biosynthesis; tryptophan synthase subunit alpha 1341853 trpA 6964139 trpA Helicobacter pylori G27 tryptophan synthase subunit alpha YP_002266837.1 1341065 R 563041 CDS YP_002266838.1 208435172 6964140 complement(1341850..1343031) 1 NC_011333.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1343031 6964140 HPG27_1224 Helicobacter pylori G27 tryptophan synthase subunit beta YP_002266838.1 1341850 R 563041 CDS YP_002266839.1 208435173 6964141 complement(1343033..1344382) 1 NC_011333.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase 1344382 6964141 HPG27_1225 Helicobacter pylori G27 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase YP_002266839.1 1343033 R 563041 CDS YP_002266840.1 208435174 6964142 complement(1344384..1345391) 1 NC_011333.1 Catalyzes the conversion of N-(5-phospho-D-ribosyl)-anthranilate and diphosphate to anthranilate and 5-phospho-alpha-D-ribose 1-diphosphate; anthranilate phosphoribosyltransferase 1345391 trpD 6964142 trpD Helicobacter pylori G27 anthranilate phosphoribosyltransferase YP_002266840.1 1344384 R 563041 CDS YP_002266841.1 208435175 6964143 complement(1345388..1345972) 1 NC_011333.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; anthranilate synthase component II 1345972 6964143 HPG27_1227 Helicobacter pylori G27 anthranilate synthase component II YP_002266841.1 1345388 R 563041 CDS YP_002266842.1 208435176 6964144 complement(1345969..1347528) 1 NC_011333.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; anthranilate synthase component I 1347528 6964144 HPG27_1228 Helicobacter pylori G27 anthranilate synthase component I YP_002266842.1 1345969 R 563041 CDS YP_002266843.1 208435177 6964145 complement(1347703..1347954) 1 NC_011333.1 hypothetical protein 1347954 6964145 HPG27_1229 Helicobacter pylori G27 hypothetical protein YP_002266843.1 1347703 R 563041 CDS YP_002266844.1 208435178 6964146 1348125..1349387 1 NC_011333.1 hypothetical protein 1349387 6964146 HPG27_1230 Helicobacter pylori G27 hypothetical protein YP_002266844.1 1348125 D 563041 CDS YP_002266845.1 208435179 6964147 complement(1349606..1350511) 1 NC_011333.1 type II adenine specific DNA methyltransferase 1350511 6964147 HPG27_1231 Helicobacter pylori G27 type II adenine specific DNA methyltransferase YP_002266845.1 1349606 R 563041 CDS YP_002266846.1 208435180 6964148 complement(1350836..1351360) 1 NC_011333.1 hypothetical protein 1351360 6964148 HPG27_1232 Helicobacter pylori G27 hypothetical protein YP_002266846.1 1350836 R 563041 CDS YP_002266847.1 208435181 6964149 complement(1351455..1351622) 1 NC_011333.1 adenine-specific DNA methylase 1351622 6964149 HPG27_1233 Helicobacter pylori G27 adenine-specific DNA methylase YP_002266847.1 1351455 R 563041 CDS YP_002266848.1 208435182 6964150 complement(1351624..1352001) 1 NC_011333.1 adenine-specific DNA methylase 1352001 6964150 HPG27_1234 Helicobacter pylori G27 adenine-specific DNA methylase YP_002266848.1 1351624 R 563041 CDS YP_002266849.1 208435183 6964151 complement(1352064..1353521) 1 NC_011333.1 hypothetical protein 1353521 6964151 HPG27_1235 Helicobacter pylori G27 hypothetical protein YP_002266849.1 1352064 R 563041 CDS YP_002266850.1 208435184 6964152 complement(1353618..1354658) 1 NC_011333.1 hypothetical protein 1354658 6964152 HPG27_1236 Helicobacter pylori G27 hypothetical protein YP_002266850.1 1353618 R 563041 CDS YP_002266851.1 208435185 6964153 complement(1354726..1355418) 1 NC_011333.1 acid phosphatase lipoprotein 1355418 6964153 HPG27_1237 Helicobacter pylori G27 acid phosphatase lipoprotein YP_002266851.1 1354726 R 563041 CDS YP_002266852.1 208435186 6964154 1355587..1356135 1 NC_011333.1 hypothetical protein 1356135 6964154 HPG27_1238 Helicobacter pylori G27 hypothetical protein YP_002266852.1 1355587 D 563041 CDS YP_002266853.1 208435187 6964155 1356723..1357379 1 NC_011333.1 putative transcriptional regulator 1357379 6964155 HPG27_1239 Helicobacter pylori G27 putative transcriptional regulator YP_002266853.1 1356723 D 563041 CDS YP_002266854.1 208435188 6964156 1357501..1358163 1 NC_011333.1 nicotinamide mononucleotide transporter 1358163 6964156 HPG27_1240 Helicobacter pylori G27 nicotinamide mononucleotide transporter YP_002266854.1 1357501 D 563041 CDS YP_002266855.1 208435189 6964157 1358160..1358765 1 NC_011333.1 hypothetical protein 1358765 6964157 HPG27_1241 Helicobacter pylori G27 hypothetical protein YP_002266855.1 1358160 D 563041 CDS YP_002266856.1 208435190 6964158 complement(1359473..1359823) 1 NC_011333.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1359823 rplQ 6964158 rplQ Helicobacter pylori G27 50S ribosomal protein L17 YP_002266856.1 1359473 R 563041 CDS YP_002266857.1 208435191 6964159 complement(1359846..1360856) 1 NC_011333.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1360856 rpoA 6964159 rpoA Helicobacter pylori G27 DNA-directed RNA polymerase subunit alpha YP_002266857.1 1359846 R 563041 CDS YP_002266858.1 208435192 6964160 complement(1360868..1361494) 1 NC_011333.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1361494 rpsD 6964160 rpsD Helicobacter pylori G27 30S ribosomal protein S4 YP_002266858.1 1360868 R 563041 CDS YP_002266859.1 208435193 6964161 complement(1361504..1361899) 1 NC_011333.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1361899 rpsK 6964161 rpsK Helicobacter pylori G27 30S ribosomal protein S11 YP_002266859.1 1361504 R 563041 CDS YP_002266860.1 208435194 6964162 complement(1361922..1362284) 1 NC_011333.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1362284 rpsM 6964162 rpsM Helicobacter pylori G27 30S ribosomal protein S13 YP_002266860.1 1361922 R 563041 CDS YP_002266861.1 208435195 6964163 complement(1362479..1362697) 1 NC_011333.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1362697 infA 6964163 infA Helicobacter pylori G27 translation initiation factor IF-1 YP_002266861.1 1362479 R 563041 CDS YP_002266862.1 208435196 6964164 complement(1362697..1363458) 1 NC_011333.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1363458 6964164 HPG27_1248 Helicobacter pylori G27 methionine aminopeptidase YP_002266862.1 1362697 R 563041 CDS YP_002266863.1 208435197 6964165 complement(1363458..1364720) 1 NC_011333.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1364720 secY 6964165 secY Helicobacter pylori G27 preprotein translocase subunit SecY YP_002266863.1 1363458 R 563041 CDS YP_002266864.1 208435198 6964166 complement(1364760..1365161) 1 NC_011333.1 late assembly protein; 50S ribosomal protein L15 1365161 rplO 6964166 rplO Helicobacter pylori G27 50S ribosomal protein L15 YP_002266864.1 1364760 R 563041 CDS YP_002266865.1 208435199 6964167 complement(1365179..1365622) 1 NC_011333.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1365622 rpsE 6964167 rpsE Helicobacter pylori G27 30S ribosomal protein S5 YP_002266865.1 1365179 R 563041 CDS YP_002266866.1 208435200 6964168 complement(1365637..1365993) 1 NC_011333.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1365993 rplR 6964168 rplR Helicobacter pylori G27 50S ribosomal protein L18 YP_002266866.1 1365637 R 563041 CDS YP_002266867.1 208435201 6964169 complement(1366007..1366543) 1 NC_011333.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1366543 rplF 6964169 rplF Helicobacter pylori G27 50S ribosomal protein L6 YP_002266867.1 1366007 R 563041 CDS YP_002266868.1 208435202 6964170 complement(1366554..1366949) 1 NC_011333.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1366949 rpsH 6964170 rpsH Helicobacter pylori G27 30S ribosomal protein S8 YP_002266868.1 1366554 R 563041 CDS YP_002266869.1 208435203 6964171 complement(1366959..1367144) 1 NC_011333.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group appear to contain the zinc-binding motif; 30S ribosomal protein S14 1367144 rpsN 6964171 rpsN Helicobacter pylori G27 30S ribosomal protein S14 YP_002266869.1 1366959 R 563041 CDS YP_002266870.1 208435204 6964172 complement(1367154..1367699) 1 NC_011333.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1367699 rplE 6964172 rplE Helicobacter pylori G27 50S ribosomal protein L5 YP_002266870.1 1367154 R 563041 CDS YP_002266871.1 208435205 6964173 complement(1367712..1367906) 1 NC_011333.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1367906 rplX 6964173 rplX Helicobacter pylori G27 50S ribosomal protein L24 YP_002266871.1 1367712 R 563041 CDS YP_002266872.1 208435206 6964174 complement(1367934..1368302) 1 NC_011333.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1368302 rplN 6964174 rplN Helicobacter pylori G27 50S ribosomal protein L14 YP_002266872.1 1367934 R 563041 CDS YP_002266873.1 208435207 6964175 complement(1368305..1368565) 1 NC_011333.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1368565 rpsQ 6964175 rpsQ Helicobacter pylori G27 30S ribosomal protein S17 YP_002266873.1 1368305 R 563041 CDS YP_002266874.1 208435208 6964176 complement(1368579..1368764) 1 NC_011333.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1368764 rpmC 6964176 rpmC Helicobacter pylori G27 50S ribosomal protein L29 YP_002266874.1 1368579 R 563041 CDS YP_002266875.1 208435209 6964177 complement(1368766..1369191) 1 NC_011333.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1369191 rplP 6964177 rplP Helicobacter pylori G27 50S ribosomal protein L16 YP_002266875.1 1368766 R 563041 CDS YP_002266876.1 208435210 6964178 complement(1369194..1369898) 1 NC_011333.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1369898 rpsC 6964178 rpsC Helicobacter pylori G27 30S ribosomal protein S3 YP_002266876.1 1369194 R 563041 CDS YP_002266877.1 208435211 6964179 complement(1369902..1370270) 1 NC_011333.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1370270 rplV 6964179 rplV Helicobacter pylori G27 50S ribosomal protein L22 YP_002266877.1 1369902 R 563041 CDS YP_002266878.1 208435212 6964180 complement(1370280..1370561) 1 NC_011333.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1370561 rpsS 6964180 rpsS Helicobacter pylori G27 30S ribosomal protein S19 YP_002266878.1 1370280 R 563041 CDS YP_002266879.1 208435213 6964181 complement(1370572..1371402) 1 NC_011333.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1371402 rplB 6964181 rplB Helicobacter pylori G27 50S ribosomal protein L2 YP_002266879.1 1370572 R 563041 CDS YP_002266880.1 208435214 6964182 complement(1371418..1371699) 1 NC_011333.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1371699 rplW 6964182 rplW Helicobacter pylori G27 50S ribosomal protein L23 YP_002266880.1 1371418 R 563041 CDS YP_002266881.1 208435215 6964183 complement(1371703..1372350) 1 NC_011333.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1372350 rplD 6964183 rplD Helicobacter pylori G27 50S ribosomal protein L4 YP_002266881.1 1371703 R 563041 CDS YP_002266882.1 208435216 6964184 complement(1372385..1372960) 1 NC_011333.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1372960 rplC 6964184 rplC Helicobacter pylori G27 50S ribosomal protein L3 YP_002266882.1 1372385 R 563041 CDS YP_002266883.1 208435217 6964185 complement(1372997..1373311) 1 NC_011333.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1373311 rpsJ 6964185 rpsJ Helicobacter pylori G27 30S ribosomal protein S10 YP_002266883.1 1372997 R 563041 CDS YP_002266884.1 208435218 6964186 1373521..1374609 1 NC_011333.1 ATP-binding protein 1374609 6964186 HPG27_1270 Helicobacter pylori G27 ATP-binding protein YP_002266884.1 1373521 D 563041 CDS YP_002266885.1 208435219 6964187 1374851..1375429 1 NC_011333.1 hypothetical protein 1375429 6964187 HPG27_1271 Helicobacter pylori G27 hypothetical protein YP_002266885.1 1374851 D 563041 CDS YP_002266886.1 208435220 6964188 complement(1375403..1376017) 1 NC_011333.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; ribonuclease HII 1376017 rnhB 6964188 rnhB Helicobacter pylori G27 ribonuclease HII YP_002266886.1 1375403 R 563041 CDS YP_002266887.1 208435221 6964189 complement(1376190..1377581) 1 NC_011333.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; fumarate hydratase 1377581 fumC 6964189 fumC Helicobacter pylori G27 fumarate hydratase YP_002266887.1 1376190 R 563041 CDS YP_002266888.1 208435222 6964190 1377756..1378133 1 NC_011333.1 hypothetical protein 1378133 6964190 HPG27_1274 Helicobacter pylori G27 hypothetical protein YP_002266888.1 1377756 D 563041 CDS YP_002266889.1 208435223 6964191 1378198..1379376 1 NC_011333.1 hypothetical protein 1379376 6964191 HPG27_1275 Helicobacter pylori G27 hypothetical protein YP_002266889.1 1378198 D 563041 CDS YP_002266890.1 208435224 6964192 1379373..1380380 1 NC_011333.1 cation efflux system protein 1380380 6964192 HPG27_1276 Helicobacter pylori G27 cation efflux system protein YP_002266890.1 1379373 D 563041 CDS YP_002266891.1 208435225 6964193 1380381..1383494 1 NC_011333.1 cation efflux system protein 1383494 6964193 HPG27_1277 Helicobacter pylori G27 cation efflux system protein YP_002266891.1 1380381 D 563041 CDS YP_002266892.1 208435226 6964194 complement(1383497..1383838) 1 NC_011333.1 branched-chain amino acid transport protein 1383838 6964194 HPG27_1278 Helicobacter pylori G27 branched-chain amino acid transport protein YP_002266892.1 1383497 R 563041 CDS YP_002266893.1 208435227 6964195 complement(1383838..1384524) 1 NC_011333.1 branched-chain amino acid transport protein 1384524 6964195 HPG27_1279 Helicobacter pylori G27 branched-chain amino acid transport protein YP_002266893.1 1383838 R 563041 CDS YP_002266894.1 208435228 6964196 complement(1384535..1385644) 1 NC_011333.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; chaperone protein DnaJ 1385644 dnaJ 6964196 dnaJ Helicobacter pylori G27 chaperone protein DnaJ YP_002266894.1 1384535 R 563041 CDS YP_002266895.1 208435229 6964197 1385768..1386898 1 NC_011333.1 hypothetical protein 1386898 6964197 HPG27_1281 Helicobacter pylori G27 hypothetical protein YP_002266895.1 1385768 D 563041 CDS YP_002266896.1 208435230 6964198 1387124..1387786 1 NC_011333.1 hypothetical protein 1387786 6964198 HPG27_1282 Helicobacter pylori G27 hypothetical protein YP_002266896.1 1387124 D 563041 CDS YP_002266897.1 208435231 6964199 complement(1387850..1388878) 1 NC_011333.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 1388878 mnmA 6964199 mnmA Helicobacter pylori G27 tRNA-specific 2-thiouridylase MnmA YP_002266897.1 1387850 R 563041 CDS YP_002266898.1 208435232 6964200 1389016..1389777 1 NC_011333.1 hypothetical protein 1389777 6964200 HPG27_1284 Helicobacter pylori G27 hypothetical protein YP_002266898.1 1389016 D 563041 CDS YP_002266899.1 208435233 6964201 complement(1389774..1390163) 1 NC_011333.1 nicotinate-nucleotide adenyltransferase 1390163 6964201 HPG27_1285 Helicobacter pylori G27 nicotinate-nucleotide adenyltransferase YP_002266899.1 1389774 R 563041 CDS YP_002266900.1 208435234 6964202 complement(1390282..1390728) 1 NC_011333.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 1390728 6964202 HPG27_1286 Helicobacter pylori G27 nickel responsive regulator YP_002266900.1 1390282 R 563041 CDS YP_002266901.1 208435235 6964203 1391051..1391488 1 NC_011333.1 biopolymer transport protein 1391488 6964203 HPG27_1287 Helicobacter pylori G27 biopolymer transport protein YP_002266901.1 1391051 D 563041 CDS YP_002266902.1 208435236 6964204 1391485..1391874 1 NC_011333.1 biopolymer transport protein 1391874 6964204 HPG27_1288 Helicobacter pylori G27 biopolymer transport protein YP_002266902.1 1391485 D 563041 CDS YP_002266903.1 208435237 6964205 1391966..1392697 1 NC_011333.1 siderophore-mediated iron transport protein 1392697 6964205 HPG27_1289 Helicobacter pylori G27 siderophore-mediated iron transport protein YP_002266903.1 1391966 D 563041 CDS YP_002266904.1 208435238 6964206 1392974..1393354 1 NC_011333.1 outer membrane protein 1393354 6964206 HPG27_1290 Helicobacter pylori G27 outer membrane protein YP_002266904.1 1392974 D 563041 CDS YP_002266905.1 208435239 6964207 complement(1393498..1394226) 1 NC_011333.1 hypothetical protein 1394226 6964207 HPG27_1291 Helicobacter pylori G27 hypothetical protein YP_002266905.1 1393498 R 563041 CDS YP_002266906.1 208435240 6964208 complement(1394232..1395188) 1 NC_011333.1 magnesium and cobalt transport protein 1395188 6964208 HPG27_1292 Helicobacter pylori G27 magnesium and cobalt transport protein YP_002266906.1 1394232 R 563041 CDS YP_002266907.1 208435241 6964209 complement(1395204..1396412) 1 NC_011333.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 1396412 pgk 6964209 pgk Helicobacter pylori G27 phosphoglycerate kinase YP_002266907.1 1395204 R 563041 CDS YP_002266908.1 208435242 6964210 complement(1396428..1397420) 1 NC_011333.1 glyceraldehyde-3-phosphate dehydrogenase 1397420 gapB 6964210 gapB Helicobacter pylori G27 glyceraldehyde-3-phosphate dehydrogenase YP_002266908.1 1396428 R 563041 CDS YP_002266909.1 208435243 6964211 complement(1397509..1398210) 1 NC_011333.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1398210 6964211 HPG27_1295 Helicobacter pylori G27 uracil-DNA glycosylase YP_002266909.1 1397509 R 563041 CDS YP_002266910.1 208435244 6964212 complement(1398207..1398869) 1 NC_011333.1 1-acyl-glycerol-3-phosphate acyl transferase 1398869 6964212 HPG27_1296 Helicobacter pylori G27 1-acyl-glycerol-3-phosphate acyl transferase YP_002266910.1 1398207 R 563041 CDS YP_002266911.1 208435245 6964213 complement(1398907..1400022) 1 NC_011333.1 hypothetical protein 1400022 6964213 HPG27_1297 Helicobacter pylori G27 hypothetical protein YP_002266911.1 1398907 R 563041 CDS YP_002266912.1 208435246 6964214 complement(1400086..1401450) 1 NC_011333.1 carboxyl-terminal protease 1401450 6964214 HPG27_1298 Helicobacter pylori G27 carboxyl-terminal protease YP_002266912.1 1400086 R 563041 CDS YP_002266913.1 208435247 6964215 complement(1401672..1402394) 1 NC_011333.1 type II restriction endonuclease 1402394 6964215 HPG27_1299 Helicobacter pylori G27 type II restriction endonuclease YP_002266913.1 1401672 R 563041 CDS YP_002266914.1 208435248 6964216 complement(1402391..1402543) 1 NC_011333.1 hypothetical protein 1402543 6964216 HPG27_1300 Helicobacter pylori G27 hypothetical protein YP_002266914.1 1402391 R 563041 CDS YP_002266915.1 208435249 6964217 complement(1402544..1403623) 1 NC_011333.1 adenine specific DNA methyltransferase 1403623 6964217 HPG27_1301 Helicobacter pylori G27 adenine specific DNA methyltransferase YP_002266915.1 1402544 R 563041 CDS YP_002266916.1 208435250 6964218 complement(1403873..1407241) 1 NC_011333.1 adenine specific DNA methyltransferase 1407241 6964218 HPG27_1302 Helicobacter pylori G27 adenine specific DNA methyltransferase YP_002266916.1 1403873 R 563041 CDS YP_002266917.1 208435251 6964219 complement(1407266..1408087) 1 NC_011333.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1408087 6964219 HPG27_1303 Helicobacter pylori G27 nicotinate-nucleotide pyrophosphorylase YP_002266917.1 1407266 R 563041 CDS YP_002266918.1 208435252 6964220 complement(1408087..1409064) 1 NC_011333.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1409064 6964220 HPG27_1304 Helicobacter pylori G27 quinolinate synthetase YP_002266918.1 1408087 R 563041 CDS YP_002266919.1 208435253 6964221 complement(1409087..1409848) 1 NC_011333.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1409848 6964221 HPG27_1305 Helicobacter pylori G27 phosphatidylserine decarboxylase YP_002266919.1 1409087 R 563041 CDS YP_002266920.1 208435254 6964222 complement(1409884..1410390) 1 NC_011333.1 hypothetical protein 1410390 6964222 HPG27_1306 Helicobacter pylori G27 hypothetical protein YP_002266920.1 1409884 R 563041 CDS YP_002266921.1 208435255 6964223 complement(1410403..1410912) 1 NC_011333.1 hypothetical protein 1410912 6964223 HPG27_1307 Helicobacter pylori G27 hypothetical protein YP_002266921.1 1410403 R 563041 CDS YP_002266922.1 208435256 6964224 complement(1410912..1411775) 1 NC_011333.1 UbiA prenyltransferase family catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 1411775 ubiA 6964224 ubiA Helicobacter pylori G27 prenyltransferase YP_002266922.1 1410912 R 563041 CDS YP_002266923.1 208435257 6964225 complement(1411802..1413115) 1 NC_011333.1 competence locus E 1413115 6964225 HPG27_1309 Helicobacter pylori G27 competence locus E YP_002266923.1 1411802 R 563041 CDS YP_002266924.1 208435258 6964226 complement(1413112..1414578) 1 NC_011333.1 unwinds double stranded DNA; replicative DNA helicase 1414578 dnaB 6964226 dnaB Helicobacter pylori G27 replicative DNA helicase YP_002266924.1 1413112 R 563041 CDS YP_002266925.1 208435259 6964227 complement(1414589..1415989) 1 NC_011333.1 hypothetical protein 1415989 6964227 HPG27_1311 Helicobacter pylori G27 hypothetical protein YP_002266925.1 1414589 R 563041 CDS YP_002266926.1 208435260 6964228 complement(1415992..1417110) 1 NC_011333.1 putative histidine kinase sensor protein 1417110 6964228 HPG27_1312 Helicobacter pylori G27 putative histidine kinase sensor protein YP_002266926.1 1415992 R 563041 CDS YP_002266927.1 208435261 6964229 complement(1417160..1417801) 1 NC_011333.1 response regulator 1417801 6964229 HPG27_1313 Helicobacter pylori G27 response regulator YP_002266927.1 1417160 R 563041 CDS YP_002266928.1 208435262 6964230 1417870..1419297 1 NC_011333.1 type III restriction enzyme M protein 1419297 6964230 HPG27_1314 Helicobacter pylori G27 type III restriction enzyme M protein YP_002266928.1 1417870 D 563041 CDS YP_002266929.1 208435263 6964231 1419432..1420331 1 NC_011333.1 adenine-specific DNA methylase 1420331 6964231 HPG27_1315 Helicobacter pylori G27 adenine-specific DNA methylase YP_002266929.1 1419432 D 563041 CDS YP_002266930.1 208435264 6964232 1420342..1423242 1 NC_011333.1 type III restriction enzyme R protein 1423242 6964232 HPG27_1316 Helicobacter pylori G27 type III restriction enzyme R protein YP_002266930.1 1420342 D 563041 CDS YP_002266931.1 208435265 6964233 complement(1423293..1424039) 1 NC_011333.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1424039 mreC 6964233 mreC Helicobacter pylori G27 rod shape-determining protein MreC YP_002266931.1 1423293 R 563041 CDS YP_002266932.1 208435266 6964234 complement(1424043..1425086) 1 NC_011333.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1425086 mreB 6964234 mreB Helicobacter pylori G27 rod shape-determining protein MreB YP_002266932.1 1424043 R 563041 CDS YP_002266933.1 208435267 6964235 complement(1425129..1426475) 1 NC_011333.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1426475 clpX 6964235 clpX Helicobacter pylori G27 ATP-dependent protease ATP-binding subunit ClpX YP_002266933.1 1425129 R 563041 CDS YP_002266934.1 208435268 6964236 complement(1426477..1427289) 1 NC_011333.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1427289 6964236 HPG27_1320 Helicobacter pylori G27 UDP-N-acetylglucosamine acyltransferase YP_002266934.1 1426477 R 563041 CDS YP_002266935.1 208435269 6964237 complement(1427292..1427771) 1 NC_011333.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1427771 fabZ 6964237 fabZ Helicobacter pylori G27 (3R)-hydroxymyristoyl-ACP dehydratase YP_002266935.1 1427292 R 563041 CDS YP_002266936.1 208435270 6964238 complement(1427942..1428244) 1 NC_011333.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 1428244 6964238 HPG27_1322 Helicobacter pylori G27 flagellar assembly protein FliW YP_002266936.1 1427942 R 563041 CDS YP_002266937.1 208435271 6964239 1428732..1429394 1 NC_011333.1 competence lipoprotein 1429394 comL 6964239 comL Helicobacter pylori G27 competence lipoprotein YP_002266937.1 1428732 D 563041 CDS YP_002266938.1 208435272 6964240 1429437..1431914 1 NC_011333.1 ATP-dependent protease 1431914 6964240 HPG27_1324 Helicobacter pylori G27 ATP-dependent protease YP_002266938.1 1429437 D 563041 CDS YP_002266939.1 208435273 6964241 1431923..1432750 1 NC_011333.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 1432750 6964241 HPG27_1325 Helicobacter pylori G27 prephenate dehydrogenase YP_002266939.1 1431923 D 563041 CDS YP_002266940.1 208435274 6964242 complement(1433078..1433941) 1 NC_011333.1 putative endonuclease G 1433941 6964242 HPG27_1326 Helicobacter pylori G27 putative endonuclease G YP_002266940.1 1433078 R 563041 CDS YP_002266941.1 208435275 6964243 complement(1434221..1435825) 1 NC_011333.1 putative type III restriction enzyme M protein 1435825 6964243 HPG27_1327 Helicobacter pylori G27 putative type III restriction enzyme M protein YP_002266941.1 1434221 R 563041 CDS YP_002266942.1 208435276 6964244 complement(1435927..1438266) 1 NC_011333.1 putative type III restriction enzyme R protein 1438266 6964244 HPG27_1328 Helicobacter pylori G27 putative type III restriction enzyme R protein YP_002266942.1 1435927 R 563041 CDS YP_002266943.1 208435277 6964245 1438681..1439529 1 NC_011333.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 1439529 6964245 HPG27_1329 Helicobacter pylori G27 biotin synthase YP_002266943.1 1438681 D 563041 CDS YP_002266944.1 208435278 6964246 1439529..1440407 1 NC_011333.1 putative ribonuclease N 1440407 6964246 HPG27_1330 Helicobacter pylori G27 putative ribonuclease N YP_002266944.1 1439529 D 563041 CDS YP_002266945.1 208435279 6964247 complement(1440460..1440666) 1 NC_011333.1 hypothetical protein 1440666 6964247 HPG27_1331 Helicobacter pylori G27 hypothetical protein YP_002266945.1 1440460 R 563041 CDS YP_002266946.1 208435280 6964250 complement(1444716..1444898) 1 NC_011333.1 hypothetical protein 1444898 6964250 HPG27_1332 Helicobacter pylori G27 hypothetical protein YP_002266946.1 1444716 R 563041 CDS YP_002266947.1 208435281 6964251 1445305..1445790 1 NC_011333.1 hypothetical protein 1445790 6964251 HPG27_1333 Helicobacter pylori G27 hypothetical protein YP_002266947.1 1445305 D 563041 CDS YP_002266948.1 208435282 6964252 1445790..1447589 1 NC_011333.1 hypothetical protein 1447589 6964252 HPG27_1334 Helicobacter pylori G27 hypothetical protein YP_002266948.1 1445790 D 563041 CDS YP_002266949.1 208435283 6964253 1447740..1448645 1 NC_011333.1 hypothetical protein 1448645 6964253 HPG27_1335 Helicobacter pylori G27 hypothetical protein YP_002266949.1 1447740 D 563041 CDS YP_002266950.1 208435284 6964254 complement(1448758..1449204) 1 NC_011333.1 NADPH-dependent; catalyzes the reduction of 7-cyano-7-deazaguanine to 7-aminomethyl-7-deazaguanine in queuosine biosynthesis; 7-cyano-7-deazaguanine reductase 1449204 6964254 HPG27_1336 Helicobacter pylori G27 7-cyano-7-deazaguanine reductase YP_002266950.1 1448758 R 563041 CDS YP_002266951.1 208435285 6964255 1449264..1449605 1 NC_011333.1 hypothetical protein 1449605 6964255 HPG27_1337 Helicobacter pylori G27 hypothetical protein YP_002266951.1 1449264 D 563041 CDS YP_002266952.1 208435286 6964256 1449676..1450506 1 NC_011333.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 1450506 miaA 6964256 miaA Helicobacter pylori G27 tRNA delta(2)-isopentenylpyrophosphate transferase YP_002266952.1 1449676 D 563041 CDS YP_002266953.1 208435287 6964257 1450511..1451614 1 NC_011333.1 lipopolysaccharide1,2-glucosyltransferase 1451614 6964257 HPG27_1339 Helicobacter pylori G27 lipopolysaccharide1,2-glucosyltransferase YP_002266953.1 1450511 D 563041 CDS YP_002266954.1 208435288 6964259 complement(1453342..1454121) 1 NC_011333.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 1454121 murB 6964259 murB Helicobacter pylori G27 UDP-N-acetylenolpyruvoylglucosamine reductase YP_002266954.1 1453342 R 563041 CDS YP_002266955.1 208435289 6964260 complement(1454125..1454391) 1 NC_011333.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 1454391 fliQ 6964260 fliQ Helicobacter pylori G27 flagellar biosynthesis protein FliQ YP_002266955.1 1454125 R 563041 CDS YP_002266956.1 208435290 6964261 complement(1454402..1455706) 1 NC_011333.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 1455706 fliI 6964261 fliI Helicobacter pylori G27 flagellum-specific ATP synthase YP_002266956.1 1454402 R 563041 CDS YP_002266957.1 208435291 6964262 complement(1455707..1456621) 1 NC_011333.1 type IV secretion system ATPase 1456621 6964262 HPG27_1344 Helicobacter pylori G27 type IV secretion system ATPase YP_002266957.1 1455707 R 563041 CDS YP_002266958.1 208435292 6964263 complement(1456638..1459400) 1 NC_011333.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1459400 ileS 6964263 ileS Helicobacter pylori G27 isoleucyl-tRNA synthetase YP_002266958.1 1456638 R 563041 CDS YP_002266959.1 208435293 6964264 complement(1459425..1459679) 1 NC_011333.1 hypothetical protein 1459679 6964264 HPG27_1346 Helicobacter pylori G27 hypothetical protein YP_002266959.1 1459425 R 563041 CDS YP_002266960.1 208435294 6964265 1459781..1460407 1 NC_011333.1 hypothetical protein 1460407 6964265 HPG27_1347 Helicobacter pylori G27 hypothetical protein YP_002266960.1 1459781 D 563041 CDS YP_002266961.1 208435295 6964266 complement(1460456..1460677) 1 NC_011333.1 hypothetical protein 1460677 6964266 HPG27_1348 Helicobacter pylori G27 hypothetical protein YP_002266961.1 1460456 R 563041 CDS YP_002266962.1 208435296 6964267 complement(1460831..1461904) 1 NC_011333.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1461904 6964267 HPG27_1349 Helicobacter pylori G27 ribosomal RNA large subunit methyltransferase N YP_002266962.1 1460831 R 563041 CDS YP_002266963.1 208435297 6964268 complement(1461901..1462734) 1 NC_011333.1 polysialicacid capsule expression protein 1462734 6964268 HPG27_1350 Helicobacter pylori G27 polysialicacid capsule expression protein YP_002266963.1 1461901 R 563041 CDS YP_002266964.1 208435298 6964269 complement(1462874..1464943) 1 NC_011333.1 ATP/GTP binding protein 1464943 6964269 HPG27_1351 Helicobacter pylori G27 ATP/GTP binding protein YP_002266964.1 1462874 R 563041 CDS YP_002266965.1 208435299 6964270 complement(1464983..1465798) 1 NC_011333.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1465798 ksgA 6964270 ksgA Helicobacter pylori G27 dimethyladenosine transferase YP_002266965.1 1464983 R 563041 CDS YP_002266966.1 208435300 6964271 1466062..1466319 1 NC_011333.1 hypothetical protein 1466319 6964271 HPG27_1353 Helicobacter pylori G27 hypothetical protein YP_002266966.1 1466062 D 563041 CDS YP_002266967.1 208435301 6964273 complement(1469369..1470250) 1 NC_011333.1 formyl tetrahydrofolate hydrolase 1470250 6964273 HPG27_1355 Helicobacter pylori G27 formyl tetrahydrofolate hydrolase YP_002266967.1 1469369 R 563041 CDS YP_002266968.1 208435302 6964274 complement(1470253..1471131) 1 NC_011333.1 signal peptide protease IV 1471131 6964274 HPG27_1356 Helicobacter pylori G27 signal peptide protease IV YP_002266968.1 1470253 R 563041 CDS YP_002266969.1 208435303 6964275 1471202..1471447 1 NC_011333.1 hypothetical protein 1471447 6964275 HPG27_1357 Helicobacter pylori G27 hypothetical protein YP_002266969.1 1471202 D 563041 CDS YP_002266970.1 208435304 6964276 1471686..1472363 1 NC_011333.1 hypothetical protein 1472363 6964276 HPG27_1358 Helicobacter pylori G27 hypothetical protein YP_002266970.1 1471686 D 563041 CDS YP_002266971.1 208435305 6964277 1472372..1472851 1 NC_011333.1 lipoprotein 1472851 6964277 HPG27_1359 Helicobacter pylori G27 lipoprotein YP_002266971.1 1472372 D 563041 CDS YP_002266972.1 208435306 6964278 1472862..1473329 1 NC_011333.1 hypothetical protein 1473329 6964278 HPG27_1360 Helicobacter pylori G27 hypothetical protein YP_002266972.1 1472862 D 563041 CDS YP_002266973.1 208435307 6964279 complement(1473895..1474236) 1 NC_011333.1 hypothetical protein 1474236 6964279 HPG27_1361 Helicobacter pylori G27 hypothetical protein YP_002266973.1 1473895 R 563041 CDS YP_002266974.1 208435308 6964281 complement(1476630..1477418) 1 NC_011333.1 hypothetical protein 1477418 6964281 HPG27_1362 Helicobacter pylori G27 hypothetical protein YP_002266974.1 1476630 R 563041 CDS YP_002266975.1 208435309 6964282 1477542..1478030 1 NC_011333.1 peptidyl-prolyl cis-trans isomerase B 1478030 6964282 HPG27_1363 Helicobacter pylori G27 peptidyl-prolyl cis-trans isomerase B YP_002266975.1 1477542 D 563041 CDS YP_002266976.1 208435310 6964283 1478048..1478278 1 NC_011333.1 affects carbohydrate metabolism, has regulatory role in many processes; carbon storage regulator 1478278 6964283 HPG27_1364 Helicobacter pylori G27 carbon storage regulator YP_002266976.1 1478048 D 563041 CDS YP_002266977.1 208435311 6964284 1478278..1479081 1 NC_011333.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1479081 6964284 HPG27_1365 Helicobacter pylori G27 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_002266977.1 1478278 D 563041 CDS YP_002266978.1 208435312 6964285 1479078..1479536 1 NC_011333.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 1479536 smpB 6964285 smpB Helicobacter pylori G27 SsrA-binding protein YP_002266978.1 1479078 D 563041 CDS YP_002266979.1 208435313 6964286 1479539..1479991 1 NC_011333.1 biopolymer transport protein 1479991 6964286 HPG27_1367 Helicobacter pylori G27 biopolymer transport protein YP_002266979.1 1479539 D 563041 CDS YP_002266980.1 208435314 6964287 1480002..1480403 1 NC_011333.1 biopolymer transport protein 1480403 6964287 HPG27_1368 Helicobacter pylori G27 biopolymer transport protein YP_002266980.1 1480002 D 563041 CDS YP_002266981.1 208435315 6964289 1481064..1481393 1 NC_011333.1 hypothetical protein 1481393 6964289 HPG27_1370 Helicobacter pylori G27 hypothetical protein YP_002266981.1 1481064 D 563041 CDS YP_002266982.1 208435316 6964290 1481399..1483045 1 NC_011333.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; putative inner membrane protein translocase component YidC 1483045 6964290 HPG27_1371 Helicobacter pylori G27 putative inner membrane protein translocase component YidC YP_002266982.1 1481399 D 563041 CDS YP_002266983.1 208435317 6964291 1483045..1483842 1 NC_011333.1 hypothetical protein 1483842 6964291 HPG27_1372 Helicobacter pylori G27 hypothetical protein YP_002266983.1 1483045 D 563041 CDS YP_002266984.1 208435318 6964292 1483973..1485187 1 NC_011333.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 1485187 trmE 6964292 trmE Helicobacter pylori G27 tRNA modification GTPase TrmE YP_002266984.1 1483973 D 563041 CDS YP_002266985.1 208435319 6964293 1485406..1487658 1 NC_011333.1 outer membrane protein 1487658 homD 6964293 homD Helicobacter pylori G27 outer membrane protein YP_002266985.1 1485406 D 563041 CDS YP_002266986.1 208435320 6964294 complement(1487675..1487869) 1 NC_011333.1 hypothetical protein 1487869 6964294 HPG27_1375 Helicobacter pylori G27 hypothetical protein YP_002266986.1 1487675 R 563041 CDS YP_002266987.1 208435321 6964295 complement(1487928..1488089) 1 NC_011333.1 hypothetical protein 1488089 6964295 HPG27_1376 Helicobacter pylori G27 hypothetical protein YP_002266987.1 1487928 R 563041 CDS YP_002266988.1 208435322 6964296 complement(1488480..1489391) 1 NC_011333.1 hypothetical protein 1489391 6964296 HPG27_1377 Helicobacter pylori G27 hypothetical protein YP_002266988.1 1488480 R 563041 CDS YP_002266989.1 208435323 6964297 complement(1489400..1489744) 1 NC_011333.1 hypothetical protein 1489744 6964297 HPG27_1378 Helicobacter pylori G27 hypothetical protein YP_002266989.1 1489400 R 563041 CDS YP_002266990.1 208435324 6964298 complement(1489752..1490279) 1 NC_011333.1 membrane-associated lipoprotein 1490279 6964298 HPG27_1379 Helicobacter pylori G27 membrane-associated lipoprotein YP_002266990.1 1489752 R 563041 CDS YP_002266991.1 208435325 6964299 complement(1490303..1490935) 1 NC_011333.1 hypothetical protein 1490935 6964299 HPG27_1380 Helicobacter pylori G27 hypothetical protein YP_002266991.1 1490303 R 563041 CDS YP_002266992.1 208435326 6964300 complement(1491352..1491666) 1 NC_011333.1 thioredoxin 1491666 6964300 HPG27_1381 Helicobacter pylori G27 thioredoxin YP_002266992.1 1491352 R 563041 CDS YP_002266993.1 208435327 6964301 complement(1491721..1492494) 1 NC_011333.1 ribosomal large subunit pseudouridinesynthase B 1492494 6964301 HPG27_1382 Helicobacter pylori G27 ribosomal large subunit pseudouridinesynthase B YP_002266993.1 1491721 R 563041 CDS YP_002266994.1 208435328 6964302 complement(1492491..1496126) 1 NC_011333.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1496126 dnaE 6964302 dnaE Helicobacter pylori G27 DNA polymerase III subunit alpha YP_002266994.1 1492491 R 563041 CDS YP_002266995.1 208435329 6964303 1496274..1497326 1 NC_011333.1 cytochrome c551 peroxidase 1497326 6964303 HPG27_1384 Helicobacter pylori G27 cytochrome c551 peroxidase YP_002266995.1 1496274 D 563041 CDS YP_002266996.1 208435330 6964304 complement(1497506..1498093) 1 NC_011333.1 putative secreted motility protein 1498093 6964304 HPG27_1385 Helicobacter pylori G27 putative secreted motility protein YP_002266996.1 1497506 R 563041 CDS YP_002266997.1 208435331 6964305 complement(1498112..1498789) 1 NC_011333.1 hypothetical protein 1498789 6964305 HPG27_1386 Helicobacter pylori G27 hypothetical protein YP_002266997.1 1498112 R 563041 CDS YP_002266998.1 208435332 6964306 complement(1498792..1499595) 1 NC_011333.1 ABC transport system substrate binding protein 1499595 6964306 HPG27_1387 Helicobacter pylori G27 ABC transport system substrate binding protein YP_002266998.1 1498792 R 563041 CDS YP_002266999.1 208435333 6964307 complement(1499592..1500377) 1 NC_011333.1 ABC transporter ATP-binding protein 1500377 6964307 HPG27_1388 Helicobacter pylori G27 ABC transporter ATP-binding protein YP_002266999.1 1499592 R 563041 CDS YP_002267000.1 208435334 6964308 complement(1500377..1501510) 1 NC_011333.1 ABC transport system permease 1501510 6964308 HPG27_1389 Helicobacter pylori G27 ABC transport system permease YP_002267000.1 1500377 R 563041 CDS YP_002267001.1 208435335 6964309 1501644..1502339 1 NC_011333.1 outer membrane protein 1502339 6964309 HPG27_1390 Helicobacter pylori G27 outer membrane protein YP_002267001.1 1501644 D 563041 CDS YP_002267002.1 208435336 6964310 complement(1502344..1503366) 1 NC_011333.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 1503366 6964310 HPG27_1391 Helicobacter pylori G27 branched-chain amino acid aminotransferase YP_002267002.1 1502344 R 563041 CDS YP_002267003.1 208435337 6964311 complement(1503418..1504164) 1 NC_011333.1 outer membrane protein 1504164 horJ 6964311 horJ Helicobacter pylori G27 outer membrane protein YP_002267003.1 1503418 R 563041 CDS YP_002267004.1 208435338 6964312 complement(1504279..1506996) 1 NC_011333.1 DNA polymerase I 1506996 polA 6964312 polA Helicobacter pylori G27 DNA polymerase I YP_002267004.1 1504279 R 563041 CDS YP_002267005.1 208435339 6964313 complement(1507062..1508282) 1 NC_011333.1 type II restriction enzyme 1508282 6964313 HPG27_1394 Helicobacter pylori G27 type II restriction enzyme YP_002267005.1 1507062 R 563041 CDS YP_002267006.1 208435340 6964314 complement(1508279..1510318) 1 NC_011333.1 restriction enzyme BcgI alpha chain-like protein 1510318 6964314 HPG27_1395 Helicobacter pylori G27 restriction enzyme BcgI alpha chain-like protein YP_002267006.1 1508279 R 563041 CDS YP_002267007.1 208435341 6964315 complement(1510351..1510908) 1 NC_011333.1 hypothetical protein 1510908 6964315 HPG27_1396 Helicobacter pylori G27 hypothetical protein YP_002267007.1 1510351 R 563041 CDS YP_002267008.1 208435342 6964316 complement(1510914..1511489) 1 NC_011333.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1511489 tmk 6964316 tmk Helicobacter pylori G27 thymidylate kinase YP_002267008.1 1510914 R 563041 CDS YP_002267009.1 208435343 6964317 complement(1511491..1511964) 1 NC_011333.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1511964 coaD 6964317 coaD Helicobacter pylori G27 phosphopantetheine adenylyltransferase YP_002267009.1 1511491 R 563041 CDS YP_002267010.1 208435344 6964318 complement(1511964..1512527) 1 NC_011333.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxylyase 1512527 6964318 HPG27_1399 Helicobacter pylori G27 3-octaprenyl-4-hydroxybenzoate carboxylyase YP_002267010.1 1511964 R 563041 CDS YP_002267011.1 208435345 6964319 complement(1512537..1513193) 1 NC_011333.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1513193 flgA 6964319 flgA Helicobacter pylori G27 flagellar basal body P-ring biosynthesis protein FlgA YP_002267011.1 1512537 R 563041 CDS YP_002267012.1 208435346 6964320 complement(1513190..1515238) 1 NC_011333.1 DNA helicase II 1515238 uvrD 6964320 uvrD Helicobacter pylori G27 DNA helicase II YP_002267012.1 1513190 R 563041 CDS YP_002267013.1 208435347 6964321 complement(1515235..1517769) 1 NC_011333.1 hypothetical protein 1517769 6964321 HPG27_1402 Helicobacter pylori G27 hypothetical protein YP_002267013.1 1515235 R 563041 CDS YP_002267014.1 208435348 6964322 complement(1517779..1519026) 1 NC_011333.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1519026 6964322 HPG27_1403 Helicobacter pylori G27 seryl-tRNA synthetase YP_002267014.1 1517779 R 563041 CDS YP_002267015.1 208435349 6964323 complement(1519027..1519824) 1 NC_011333.1 hypothetical protein 1519824 6964323 HPG27_1404 Helicobacter pylori G27 hypothetical protein YP_002267015.1 1519027 R 563041 CDS YP_002267016.1 208435350 6964324 complement(1519828..1520088) 1 NC_011333.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; exodeoxyribonuclease VII small subunit 1520088 6964324 HPG27_1405 Helicobacter pylori G27 exodeoxyribonuclease VII small subunit YP_002267016.1 1519828 R 563041 CDS YP_002267017.1 208435351 6964325 complement(1520098..1520838) 1 NC_011333.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1520838 ubiE 6964325 ubiE Helicobacter pylori G27 ubiquinone/menaquinone biosynthesis methyltransferase YP_002267017.1 1520098 R 563041 CDS YP_002267018.1 208435352 6964326 complement(1520865..1521311) 1 NC_011333.1 hypothetical protein 1521311 6964326 HPG27_1407 Helicobacter pylori G27 hypothetical protein YP_002267018.1 1520865 R 563041 CDS YP_002267019.1 208435353 6964327 complement(1521322..1521825) 1 NC_011333.1 hypothetical protein 1521825 6964327 HPG27_1408 Helicobacter pylori G27 hypothetical protein YP_002267019.1 1521322 R 563041 CDS YP_002267020.1 208435354 6964328 complement(1521881..1523011) 1 NC_011333.1 hypothetical protein 1523011 6964328 HPG27_1409 Helicobacter pylori G27 hypothetical protein YP_002267020.1 1521881 R 563041 CDS YP_002267021.1 208435355 6964329 complement(1523008..1524105) 1 NC_011333.1 hypothetical protein 1524105 6964329 HPG27_1410 Helicobacter pylori G27 hypothetical protein YP_002267021.1 1523008 R 563041 CDS YP_002267022.1 208435356 6964330 complement(1524117..1525106) 1 NC_011333.1 hypothetical protein 1525106 6964330 HPG27_1411 Helicobacter pylori G27 hypothetical protein YP_002267022.1 1524117 R 563041 CDS YP_002267023.1 208435357 6964331 complement(1525117..1526649) 1 NC_011333.1 lipase-like protein 1526649 6964331 HPG27_1412 Helicobacter pylori G27 lipase-like protein YP_002267023.1 1525117 R 563041 CDS YP_002267024.1 208435358 6964332 complement(1526646..1527947) 1 NC_011333.1 putative integral membrane protein with a TlyC-like hemolysin domain 1527947 6964332 HPG27_1413 Helicobacter pylori G27 putative integral membrane protein with a TlyC-like hemolysin domain YP_002267024.1 1526646 R 563041 CDS YP_002267025.1 208435359 6964333 complement(1528099..1529700) 1 NC_011333.1 phosphate permease 1529700 6964333 HPG27_1414 Helicobacter pylori G27 phosphate permease YP_002267025.1 1528099 R 563041 CDS YP_002267026.1 208435360 6964334 1529841..1530110 1 NC_011333.1 nifU-like protein 1530110 6964334 HPG27_1415 Helicobacter pylori G27 nifU-like protein YP_002267026.1 1529841 D 563041 CDS YP_002267027.1 208435361 6964335 1530122..1530733 1 NC_011333.1 hypothetical protein 1530733 6964335 HPG27_1416 Helicobacter pylori G27 hypothetical protein YP_002267027.1 1530122 D 563041 CDS YP_002267028.1 208435362 6964336 1530737..1532080 1 NC_011333.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1532080 murE 6964336 murE Helicobacter pylori G27 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_002267028.1 1530737 D 563041 CDS YP_002267029.1 208435363 6964337 1532084..1533034 1 NC_011333.1 Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 1533034 6964337 HPG27_1418 Helicobacter pylori G27 transaldolase YP_002267029.1 1532084 D 563041 CDS YP_002267030.1 208435364 6964338 1533089..1533625 1 NC_011333.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25/general stress protein Ctc 1533625 rplY 6964338 rplY Helicobacter pylori G27 50S ribosomal protein L25/general stress protein Ctc YP_002267030.1 1533089 D 563041 CDS YP_002267031.1 208435365 6964339 1533635..1534195 1 NC_011333.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1534195 6964339 HPG27_1420 Helicobacter pylori G27 peptidyl-tRNA hydrolase YP_002267031.1 1533635 D 563041 CDS YP_002267032.1 208435366 6964340 1534205..1535272 1 NC_011333.1 hypothetical protein 1535272 6964340 HPG27_1421 Helicobacter pylori G27 hypothetical protein YP_002267032.1 1534205 D 563041 CDS YP_002267033.1 208435367 6964341 1535329..1536330 1 NC_011333.1 type II methylase 1536330 6964341 HPG27_1422 Helicobacter pylori G27 type II methylase YP_002267033.1 1535329 D 563041 CDS YP_002267034.1 208435368 6964342 1536327..1537226 1 NC_011333.1 type II adenine specific DNA methyltransferase 1537226 6964342 HPG27_1423 Helicobacter pylori G27 type II adenine specific DNA methyltransferase YP_002267034.1 1536327 D 563041 CDS YP_002267035.1 208435369 6964344 complement(1538902..1540032) 1 NC_011333.1 outer membrane protein 1540032 hopK-3 6964344 hopK-3 Helicobacter pylori G27 outer membrane protein YP_002267035.1 1538902 R 563041 CDS YP_002267036.1 208435370 6964345 1540247..1540684 1 NC_011333.1 hypothetical protein 1540684 6964345 HPG27_1426 Helicobacter pylori G27 hypothetical protein YP_002267036.1 1540247 D 563041 CDS YP_002267037.1 208435371 6964347 complement(1543057..1543584) 1 NC_011333.1 hypothetical protein 1543584 6964347 HPG27_1428 Helicobacter pylori G27 hypothetical protein YP_002267037.1 1543057 R 563041 CDS YP_002267038.1 208435372 6964348 complement(1543755..1544789) 1 NC_011333.1 riboflavin biosynthesis protein 1544789 6964348 HPG27_1429 Helicobacter pylori G27 riboflavin biosynthesis protein YP_002267038.1 1543755 R 563041 CDS YP_002267039.1 208435373 6964349 complement(1544793..1546019) 1 NC_011333.1 sodium/glutamate symport carrier protein/glutamate permease 1546019 gltS 6964349 gltS Helicobacter pylori G27 sodium/glutamate symport carrier protein/glutamate permease YP_002267039.1 1544793 R 563041 CDS YP_002267040.1 208435374 6964350 1546162..1547304 1 NC_011333.1 hypothetical protein 1547304 6964350 HPG27_1431 Helicobacter pylori G27 hypothetical protein YP_002267040.1 1546162 D 563041 CDS YP_002267041.1 208435375 6964351 complement(1547314..1548690) 1 NC_011333.1 ferrodoxin-like protein 1548690 6964351 HPG27_1432 Helicobacter pylori G27 ferrodoxin-like protein YP_002267041.1 1547314 R 563041 CDS YP_002267042.1 208435376 6964352 1548766..1549458 1 NC_011333.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; putative glycerol-3-phosphate acyltransferase PlsY 1549458 6964352 HPG27_1433 Helicobacter pylori G27 putative glycerol-3-phosphate acyltransferase PlsY YP_002267042.1 1548766 D 563041 CDS YP_002267043.1 208435377 6964353 1549455..1549808 1 NC_011333.1 dihydroneopterin aldolase 1549808 6964353 HPG27_1434 Helicobacter pylori G27 dihydroneopterin aldolase YP_002267043.1 1549455 D 563041 CDS YP_002267044.1 208435378 6964354 1549831..1550118 1 NC_011333.1 FrpB-like protein 1550118 6964354 HPG27_1435 Helicobacter pylori G27 FrpB-like protein YP_002267044.1 1549831 D 563041 CDS YP_002267045.1 208435379 6964355 1550272..1552911 1 NC_011333.1 iron-regulated outer membrane protein 1552911 6964355 HPG27_1436 Helicobacter pylori G27 iron-regulated outer membrane protein YP_002267045.1 1550272 D 563041 CDS YP_002267046.1 208435380 6964356 1553139..1554299 1 NC_011333.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 1554299 6964356 HPG27_1437 Helicobacter pylori G27 selenocysteine synthase YP_002267046.1 1553139 D 563041 CDS YP_002267047.1 208435381 6964357 1554401..1555588 1 NC_011333.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1555588 nusA 6964357 nusA Helicobacter pylori G27 transcription elongation factor NusA YP_002267047.1 1554401 D 563041 CDS YP_002267048.1 208435382 6964358 complement(1555810..1556520) 1 NC_011333.1 hypothetical protein 1556520 6964358 HPG27_1439 Helicobacter pylori G27 hypothetical protein YP_002267048.1 1555810 R 563041 CDS YP_002267049.1 208435383 6964359 complement(1556561..1556998) 1 NC_011333.1 hypothetical protein 1556998 6964359 HPG27_1440 Helicobacter pylori G27 hypothetical protein YP_002267049.1 1556561 R 563041 CDS YP_002267050.1 208435384 6964360 complement(1557796..1561350) 1 NC_011333.1 type II S restriction-modification protein 1561350 6964360 HPG27_1441 Helicobacter pylori G27 type II S restriction-modification protein YP_002267050.1 1557796 R 563041 CDS YP_002267051.1 208435385 6964362 complement(1564374..1564961) 1 NC_011333.1 type III R-M system modification enzyme 1564961 6964362 HPG27_1443 Helicobacter pylori G27 type III R-M system modification enzyme YP_002267051.1 1564374 R 563041 CDS YP_002267052.1 208435386 6964363 complement(1564966..1566351) 1 NC_011333.1 type III R-M system modification enzyme 1566351 6964363 HPG27_1444 Helicobacter pylori G27 type III R-M system modification enzyme YP_002267052.1 1564966 R 563041 CDS YP_002267053.1 208435387 6964364 complement(1566402..1568273) 1 NC_011333.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1568273 recG 6964364 recG Helicobacter pylori G27 ATP-dependent DNA helicase RecG YP_002267053.1 1566402 R 563041 CDS YP_002267054.1 208435388 6964365 1568355..1568708 1 NC_011333.1 hypothetical protein 1568708 6964365 HPG27_1446 Helicobacter pylori G27 hypothetical protein YP_002267054.1 1568355 D 563041 CDS YP_002267055.1 208435389 6964366 1568813..1569346 1 NC_011333.1 hypothetical protein 1569346 6964366 HPG27_1447 Helicobacter pylori G27 hypothetical protein YP_002267055.1 1568813 D 563041 CDS YP_002267056.1 208435390 6964367 complement(1569343..1570095) 1 NC_011333.1 AP endonuclease xth family; multifunctional DNA repair protein; has AP endonuclease, 3'-5' exonuclease, ribonuclease H, and 3'-phosphomonoesterase activities.; exodeoxyribonuclease III 1570095 6964367 HPG27_1448 Helicobacter pylori G27 exodeoxyribonuclease III YP_002267056.1 1569343 R 563041 CDS YP_002267057.1 208435391 6964369 complement(1570275..1571714) 1 NC_011333.1 periplasmic competence protein 1571714 comH 6964369 comH Helicobacter pylori G27 periplasmic competence protein YP_002267057.1 1570275 R 563041 CDS YP_002267058.1 208435392 6964370 complement(1571935..1573302) 1 NC_011333.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosomal replication initiation protein 1573302 dnaA 6964370 dnaA Helicobacter pylori G27 chromosomal replication initiation protein YP_002267058.1 1571935 R 563041 CDS YP_002267059.1 208435393 6964371 1573454..1573996 1 NC_011333.1 purine nucleoside phosphorylase 1573996 6964371 HPG27_1451 Helicobacter pylori G27 purine nucleoside phosphorylase YP_002267059.1 1573454 D 563041 CDS YP_002267060.1 208435394 6964372 1574032..1574271 1 NC_011333.1 hypothetical protein 1574271 6964372 HPG27_1452 Helicobacter pylori G27 hypothetical protein YP_002267060.1 1574032 D 563041 CDS YP_002267061.1 208435395 6964373 1574272..1576065 1 NC_011333.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 1576065 6964373 HPG27_1453 Helicobacter pylori G27 glucosamine--fructose-6-phosphate aminotransferase YP_002267061.1 1574272 D 563041 CDS YP_002267062.1 208435396 6964374 1576089..1576715 1 NC_011333.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 1576715 thyX 6964374 thyX Helicobacter pylori G27 FAD-dependent thymidylate synthase YP_002267062.1 1576089 D 563041 CDS YP_002267063.1 208435397 6964375 complement(1576971..1577609) 1 NC_011333.1 typeI R-M system specificity subunit 1577609 6964375 HPG27_1455 Helicobacter pylori G27 typeI R-M system specificity subunit YP_002267063.1 1576971 R 563041 CDS YP_002267064.1 208435398 6964376 complement(1577620..1580064) 1 NC_011333.1 typeI restriction enzyme M protein 1580064 6964376 HPG27_1456 Helicobacter pylori G27 typeI restriction enzyme M protein YP_002267064.1 1577620 R 563041 CDS YP_002267065.1 208435399 6964377 1580134..1583109 1 NC_011333.1 typeI restriction enzyme R protein 1583109 6964377 HPG27_1457 Helicobacter pylori G27 typeI restriction enzyme R protein YP_002267065.1 1580134 D 563041 CDS YP_002267066.1 208435400 6964378 1583109..1583816 1 NC_011333.1 hypothetical protein 1583816 6964378 HPG27_1458 Helicobacter pylori G27 hypothetical protein YP_002267066.1 1583109 D 563041 CDS YP_002267067.1 208435401 6964379 complement(1583885..1586410) 1 NC_011333.1 iron (III) dicitrate transport protein 1586410 6964379 HPG27_1459 Helicobacter pylori G27 iron (III) dicitrate transport protein YP_002267067.1 1583885 R 563041 CDS YP_002267068.1 208435402 6964380 complement(1586762..1587730) 1 NC_011333.1 arginase 1587730 rocF 6964380 rocF Helicobacter pylori G27 arginase YP_002267068.1 1586762 R 563041 CDS YP_002267069.1 208435403 6964381 1587935..1589077 1 NC_011333.1 alanine dehydrogenase 1589077 6964381 HPG27_1461 Helicobacter pylori G27 alanine dehydrogenase YP_002267069.1 1587935 D 563041 CDS YP_002267070.1 208435404 6964382 1589200..1590921 1 NC_011333.1 hypothetical protein 1590921 6964382 HPG27_1462 Helicobacter pylori G27 hypothetical protein YP_002267070.1 1589200 D 563041 CDS YP_002267071.1 208435405 6964383 complement(1590932..1591660) 1 NC_011333.1 outer membrane protein 1591660 horL 6964383 horL Helicobacter pylori G27 outer membrane protein YP_002267071.1 1590932 R 563041 CDS YP_002267072.1 208435406 6964384 complement(1591657..1591824) 1 NC_011333.1 hypothetical protein 1591824 6964384 HPG27_1464 Helicobacter pylori G27 hypothetical protein YP_002267072.1 1591657 R 563041 CDS YP_002267073.1 208435407 6964385 1591846..1592700 1 NC_011333.1 inorganic polyphosphate/ATP-NAD kinase 1592700 6964385 HPG27_1465 Helicobacter pylori G27 inorganic polyphosphate/ATP-NAD kinase YP_002267073.1 1591846 D 563041 CDS YP_002267074.1 208435408 6964386 1592714..1594288 1 NC_011333.1 DNA repair protein 1594288 recN 6964386 recN Helicobacter pylori G27 DNA repair protein YP_002267074.1 1592714 D 563041 CDS YP_002267075.1 208435409 6964387 1594285..1595592 1 NC_011333.1 fibronectin/fibrinogen-binding protein 1595592 6964387 HPG27_1467 Helicobacter pylori G27 fibronectin/fibrinogen-binding protein YP_002267075.1 1594285 D 563041 CDS YP_002267076.1 208435410 6964388 1595612..1595908 1 NC_011333.1 hypothetical protein 1595908 6964388 HPG27_1468 Helicobacter pylori G27 hypothetical protein YP_002267076.1 1595612 D 563041 CDS YP_002267077.1 208435411 6964389 1596046..1597029 1 NC_011333.1 cysteine-rich protein C 1597029 6964389 HPG27_1469 Helicobacter pylori G27 cysteine-rich protein C YP_002267077.1 1596046 D 563041 CDS YP_002267078.1 208435412 6964390 complement(1597068..1597862) 1 NC_011333.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1597862 polC 6964390 polC Helicobacter pylori G27 DNA polymerase III subunit epsilon YP_002267078.1 1597068 R 563041 CDS YP_002267079.1 208435413 6964391 complement(1597909..1598562) 1 NC_011333.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1598562 6964391 HPG27_1471 Helicobacter pylori G27 ribulose-phosphate 3-epimerase YP_002267079.1 1597909 R 563041 CDS YP_002267080.1 208435414 6964392 1598633..1599505 1 NC_011333.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1599505 6964392 HPG27_1472 Helicobacter pylori G27 fructose-1,6-bisphosphatase YP_002267080.1 1598633 D 563041 CDS YP_002267081.1 208435415 6964393 1599505..1599708 1 NC_011333.1 hypothetical protein 1599708 6964393 HPG27_1473 Helicobacter pylori G27 hypothetical protein YP_002267081.1 1599505 D 563041 CDS YP_002267082.1 208435416 6964394 1599721..1600617 1 NC_011333.1 putative type II methylase protein 1600617 6964394 HPG27_1474 Helicobacter pylori G27 putative type II methylase protein YP_002267082.1 1599721 D 563041 CDS YP_002267083.1 208435417 6964395 1600622..1601341 1 NC_011333.1 hypothetical protein 1601341 6964395 HPG27_1475 Helicobacter pylori G27 hypothetical protein YP_002267083.1 1600622 D 563041 CDS YP_002267084.1 208435418 6964396 complement(1601463..1602320) 1 NC_011333.1 ubiquinol cytochrome c oxidoreductase, cytochrome c1 1602320 6964396 HPG27_1476 Helicobacter pylori G27 ubiquinol cytochrome c oxidoreductase, cytochrome c1 YP_002267084.1 1601463 R 563041 CDS YP_002267085.1 208435419 6964397 complement(1602317..1603555) 1 NC_011333.1 ubiquinol cytochrome c oxidoreductase,cytochrome b subunit 1603555 6964397 HPG27_1477 Helicobacter pylori G27 ubiquinol cytochrome c oxidoreductase,cytochrome b subunit YP_002267085.1 1602317 R 563041 CDS YP_002267086.1 208435420 6964398 complement(1603566..1604069) 1 NC_011333.1 ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit 1604069 6964398 HPG27_1478 Helicobacter pylori G27 ubiquinol cytochrome c oxidoreductase, Rieske 2Fe-2S subunit YP_002267086.1 1603566 R 563041 CDS YP_002267087.1 208435421 6964399 complement(1604193..1607192) 1 NC_011333.1 transcription-repair coupling factor 1607192 6964399 HPG27_1479 Helicobacter pylori G27 transcription-repair coupling factor YP_002267087.1 1604193 R 563041 CDS YP_002267088.1 208435422 6964400 complement(1607196..1607510) 1 NC_011333.1 hypothetical protein 1607510 6964400 HPG27_1480 Helicobacter pylori G27 hypothetical protein YP_002267088.1 1607196 R 563041 CDS YP_002267089.1 208435423 6964401 complement(1607525..1608463) 1 NC_011333.1 toxR-activated protein 1608463 6964401 HPG27_1481 Helicobacter pylori G27 toxR-activated protein YP_002267089.1 1607525 R 563041 CDS YP_002267090.1 208435424 6964402 complement(1608472..1609398) 1 NC_011333.1 toxR-activated protein 1609398 6964402 HPG27_1482 Helicobacter pylori G27 toxR-activated protein YP_002267090.1 1608472 R 563041 CDS YP_002267091.1 208435425 6964403 complement(1609398..1610429) 1 NC_011333.1 folylpoly glutamate synthase 1610429 folC 6964403 folC Helicobacter pylori G27 folylpoly glutamate synthase YP_002267091.1 1609398 R 563041 CDS YP_002267092.1 208435426 6964404 complement(1610557..1611069) 1 NC_011333.1 hypothetical protein 1611069 6964404 HPG27_1484 Helicobacter pylori G27 hypothetical protein YP_002267092.1 1610557 R 563041 CDS YP_002267093.1 208435427 6964405 complement(1611066..1613486) 1 NC_011333.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 1613486 leuS 6964405 leuS Helicobacter pylori G27 leucyl-tRNA synthetase YP_002267093.1 1611066 R 563041 CDS YP_002267094.1 208435428 6964406 complement(1613497..1613835) 1 NC_011333.1 hypothetical protein 1613835 6964406 HPG27_1486 Helicobacter pylori G27 hypothetical protein YP_002267094.1 1613497 R 563041 CDS YP_002267095.1 208435429 6964407 complement(1613845..1614816) 1 NC_011333.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1614816 secF 6964407 secF Helicobacter pylori G27 preprotein translocase subunit SecF YP_002267095.1 1613845 R 563041 CDS YP_002267096.1 208435430 6964408 complement(1614825..1616336) 1 NC_011333.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1616336 secD 6964408 secD Helicobacter pylori G27 preprotein translocase subunit SecD YP_002267096.1 1614825 R 563041 CDS YP_002267097.1 208435431 6964409 complement(1616389..1616781) 1 NC_011333.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1616781 yajC 6964409 yajC Helicobacter pylori G27 preprotein translocase subunit YajC YP_002267097.1 1616389 R 563041 CDS YP_002267098.1 208435432 6964410 complement(1616829..1618145) 1 NC_011333.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1618145 nhaA 6964410 nhaA Helicobacter pylori G27 pH-dependent sodium/proton antiporter YP_002267098.1 1616829 R 563041 CDS YP_002267099.1 208435433 6964411 complement(1618169..1621060) 1 NC_011333.1 putative recombination protein RecB 1621060 6964411 HPG27_1491 Helicobacter pylori G27 putative recombination protein RecB YP_002267099.1 1618169 R 563041 CDS YP_002267100.2 394894916 6964412 1621332..1622126 1 NC_011333.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1622126 rpsB 6964412 rpsB Helicobacter pylori G27 30S ribosomal protein S2 YP_002267100.2 1621332 D 563041 CDS YP_002267101.1 208435435 6964413 1622126..1623193 1 NC_011333.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1623193 tsf 6964413 tsf Helicobacter pylori G27 elongation factor Ts YP_002267101.1 1622126 D 563041 CDS YP_002267102.1 208435436 6964414 complement(1623638..1625485) 1 NC_011333.1 cell division protein 1625485 6964414 HPG27_1494 Helicobacter pylori G27 cell division protein YP_002267102.1 1623638 R 563041 CDS YP_002267103.1 208435437 6964415 complement(1625641..1625970) 1 NC_011333.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1625970 fliE 6964415 fliE Helicobacter pylori G27 flagellar hook-basal body protein FliE YP_002267103.1 1625641 R 563041 CDS YP_002267104.1 208435438 6964416 complement(1626100..1626585) 1 NC_011333.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1626585 flgC 6964416 flgC Helicobacter pylori G27 flagellar basal body rod protein FlgC YP_002267104.1 1626100 R 563041 CDS YP_002267105.1 208435439 6964417 complement(1626598..1627020) 1 NC_011333.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal body rod protein FlgB 1627020 flgB 6964417 flgB Helicobacter pylori G27 flagellar basal body rod protein FlgB YP_002267105.1 1626598 R 563041 CDS YP_002267106.1 208435440 6964418 1627224..1628390 1 NC_011333.1 cell division protein 1628390 6964418 HPG27_1498 Helicobacter pylori G27 cell division protein YP_002267106.1 1627224 D 563041 CDS YP_002267107.1 208435441 6964419 complement(1628410..1629411) 1 NC_011333.1 iron (III) ABC transporter periplasmic iron-bindin gprotein 1629411 6964419 HPG27_1499 Helicobacter pylori G27 iron (III) ABC transporter periplasmic iron-bindin gprotein YP_002267107.1 1628410 R 563041 CDS YP_002267108.1 208435442 6964420 1629651..1630247 1 NC_011333.1 alkylhydroperoxide reductase 1630247 6964420 HPG27_1500 Helicobacter pylori G27 alkylhydroperoxide reductase YP_002267108.1 1629651 D 563041 CDS YP_002267109.1 208435443 6964421 1630282..1631202 1 NC_011333.1 putative outer membrane lipoprotein 1631202 6964421 HPG27_1501 Helicobacter pylori G27 putative outer membrane lipoprotein YP_002267109.1 1630282 D 563041 CDS YP_002267110.1 208435444 6964422 complement(1631701..1633443) 1 NC_011333.1 penicillin-binding protein 2 1633443 6964422 HPG27_1502 Helicobacter pylori G27 penicillin-binding protein 2 YP_002267110.1 1631701 R 563041 CDS YP_002267111.1 208435445 6964423 complement(1633448..1633891) 1 NC_011333.1 hypothetical protein 1633891 6964423 HPG27_1503 Helicobacter pylori G27 hypothetical protein YP_002267111.1 1633448 R 563041 CDS YP_002267112.1 208435446 6964424 complement(1633903..1634529) 1 NC_011333.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1634529 engB 6964424 engB Helicobacter pylori G27 ribosome biogenesis GTP-binding protein YsxC YP_002267112.1 1633903 R 563041 CDS YP_002267113.1 208435447 6964425 complement(1634526..1635083) 1 NC_011333.1 hypothetical protein 1635083 6964425 HPG27_1505 Helicobacter pylori G27 hypothetical protein YP_002267113.1 1634526 R 563041 CDS YP_002267114.1 208435448 6964426 complement(1635083..1635631) 1 NC_011333.1 hypothetical protein 1635631 6964426 HPG27_1506 Helicobacter pylori G27 hypothetical protein YP_002267114.1 1635083 R 563041 CDS YP_002267115.1 208435449 6964427 complement(1635651..1636145) 1 NC_011333.1 ABC transporter system inner membrane protein 1636145 6964427 HPG27_1507 Helicobacter pylori G27 ABC transporter system inner membrane protein YP_002267115.1 1635651 R 563041 CDS YP_002267116.1 208435450 6964428 complement(1636142..1637089) 1 NC_011333.1 rare lipoprotein A 1637089 rlpA 6964428 rlpA Helicobacter pylori G27 rare lipoprotein A YP_002267116.1 1636142 R 563041 CDS YP_002267117.1 208435451 6964429 complement(1637089..1638201) 1 NC_011333.1 regulatory protein DniR 1638201 6964429 HPG27_1509 Helicobacter pylori G27 regulatory protein DniR YP_002267117.1 1637089 R 563041 CDS YP_002267118.1 208435452 6964430 complement(1638295..1639059) 1 NC_011333.1 DNAse 1639059 6964430 HPG27_1510 Helicobacter pylori G27 DNAse YP_002267118.1 1638295 R 563041 CDS YP_002267119.1 208435453 6964431 1639134..1639754 1 NC_011333.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1639754 6964431 HPG27_1511 Helicobacter pylori G27 riboflavin synthase subunit alpha YP_002267119.1 1639134 D 563041 CDS YP_002267120.1 208435454 6964432 1639755..1640027 1 NC_011333.1 FlhB-related flagellar biosynthesis protein 1640027 6964432 HPG27_1512 Helicobacter pylori G27 FlhB-related flagellar biosynthesis protein YP_002267120.1 1639755 D 563041 CDS YP_002267121.1 208435455 6964433 1640049..1641032 1 NC_011333.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 1641032 metN 6964433 metN Helicobacter pylori G27 DL-methionine transporter ATP-binding subunit YP_002267121.1 1640049 D 563041 CDS YP_002267122.1 208435456 6964434 1641034..1641681 1 NC_011333.1 ABC transporter permease 1641681 6964434 HPG27_1514 Helicobacter pylori G27 ABC transporter permease YP_002267122.1 1641034 D 563041 CDS YP_002267123.1 208435457 6964435 complement(1641713..1642831) 1 NC_011333.1 putative lipopolysaccharide biosynthesis protein 1642831 6964435 HPG27_1515 Helicobacter pylori G27 putative lipopolysaccharide biosynthesis protein YP_002267123.1 1641713 R 563041 CDS YP_002267124.1 208435458 6964436 complement(1642880..1643308) 1 NC_011333.1 hypothetical protein 1643308 6964436 HPG27_1516 Helicobacter pylori G27 hypothetical protein YP_002267124.1 1642880 R 563041 CDS YP_002267125.1 208435459 6964437 complement(1643318..1643914) 1 NC_011333.1 hypothetical protein 1643914 6964437 HPG27_1517 Helicobacter pylori G27 hypothetical protein YP_002267125.1 1643318 R 563041 CDS YP_002267126.1 208435460 6964438 complement(1643911..1644912) 1 NC_011333.1 undecaprenylphosphate N-acetylglucosaminyl transferase 1644912 6964438 HPG27_1518 Helicobacter pylori G27 undecaprenylphosphate N-acetylglucosaminyl transferase YP_002267126.1 1643911 R 563041 CDS YP_002267127.1 208435461 6964439 1645057..1645845 1 NC_011333.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 1645845 6964439 HPG27_1519 Helicobacter pylori G27 pyridoxine 5'-phosphate synthase YP_002267127.1 1645057 D 563041 CDS YP_002267128.1 208435462 6964440 1645847..1646770 1 NC_011333.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 1646770 pdxA 6964440 pdxA Helicobacter pylori G27 4-hydroxythreonine-4-phosphate dehydrogenase YP_002267128.1 1645847 D 563041 CDS YP_002267129.1 208435463 6964441 1646834..1647856 1 NC_011333.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; putative DNA-binding/iron metalloprotein/AP endonuclease 1647856 6964441 HPG27_1521 Helicobacter pylori G27 putative DNA-binding/iron metalloprotein/AP endonuclease YP_002267129.1 1646834 D 563041 CDS YP_002267130.1 208435464 6964442 1648464..1648661 1 NC_011333.1 hypothetical protein 1648661 6964442 HPG27_1522 Helicobacter pylori G27 hypothetical protein YP_002267130.1 1648464 D 563041 CDS YP_002267131.1 208435465 6964443 1648724..1649512 1 NC_011333.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1649512 flgG 6964443 flgG Helicobacter pylori G27 flagellar basal body rod protein FlgG YP_002267131.1 1648724 D 563041 CDS YP_002267132.1 208435466 6964444 complement(1649611..1650327) 1 NC_011333.1 hypothetical protein 1650327 6964444 HPG27_1524 Helicobacter pylori G27 hypothetical protein YP_002267132.1 1649611 R 563041 CDS YP_002267133.1 208435467 6964445 complement(1651102..1651863) 1 NC_011333.1 hypothetical protein 1651863 6964445 HPG27_1525 Helicobacter pylori G27 hypothetical protein YP_002267133.1 1651102 R 563041 CDS YP_002267134.1 208435468 6964446 complement(1652122..1652547) 1 NC_011333.1 hypothetical protein 1652547 6964446 HPG27_1526 Helicobacter pylori G27 hypothetical protein YP_002267134.1 1652122 R 563041 CDS YP_002267135.1 208435469 6964447 complement(1652580..1652837) 1 NC_011333.1 hypothetical protein 1652837 6964447 HPG27_1527 Helicobacter pylori G27 hypothetical protein YP_002267135.1 1652580 R 563041 CDS YP_002267136.1 208435471 6964460 485..2020 1 NC_011334.1 replication initiation protein A 2020 repA 6964460 repA Helicobacter pylori G27 replication initiation protein A YP_002267136.1 485 D 563041 CDS YP_002267137.1 208435472 6964450 2065..2799 1 NC_011334.1 hypothetical protein 2799 6964450 HPG27_A002 Helicobacter pylori G27 hypothetical protein YP_002267137.1 2065 D 563041 CDS YP_002267138.1 208435473 6964451 2849..3553 1 NC_011334.1 hypothetical protein 3553 6964451 HPG27_A003 Helicobacter pylori G27 hypothetical protein YP_002267138.1 2849 D 563041 CDS YP_002267139.1 208435474 6964452 complement(3672..4703) 1 NC_011334.1 MccC-like protein 4703 6964452 HPG27_A004 Helicobacter pylori G27 MccC-like protein YP_002267139.1 3672 R 563041 CDS YP_002267140.1 208435475 6964453 complement(4847..5899) 1 NC_011334.1 MccB-like protein 5899 6964453 HPG27_A005 Helicobacter pylori G27 MccB-like protein YP_002267140.1 4847 R 563041 CDS YP_002267141.1 208435476 6964454 complement(6216..6917) 1 NC_011334.1 MobD-like protein 6917 6964454 HPG27_A006 Helicobacter pylori G27 MobD-like protein YP_002267141.1 6216 R 563041 CDS YP_002267142.1 208435477 6964455 complement(6927..7457) 1 NC_011334.1 MobB-like protein 7457 6964455 HPG27_A007 Helicobacter pylori G27 MobB-like protein YP_002267142.1 6927 R 563041 CDS YP_002267143.1 208435478 6964456 complement(8150..8494) 1 NC_011334.1 MobC-like protein 8494 6964456 HPG27_A008 Helicobacter pylori G27 MobC-like protein YP_002267143.1 8150 R 563041 CDS YP_002267144.1 208435479 6964457 8693..8974 1 NC_011334.1 hypothetical protein 8974 6964457 HPG27_A009 Helicobacter pylori G27 hypothetical protein YP_002267144.1 8693 D 563041 CDS YP_002267145.1 208435480 6964458 8983..9252 1 NC_011334.1 hypothetical protein 9252 6964458 HPG27_A010 Helicobacter pylori G27 hypothetical protein YP_002267145.1 8983 D 563041 CDS YP_002267146.1 208435481 6964459 9745..9909 1 NC_011334.1 hypothetical protein 9909 6964459 HPG27_A011 Helicobacter pylori G27 hypothetical protein YP_002267146.1 9745 D 563041 CDS