-- dump date 20140619_112727 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 585538000001 SEQ_END SEQ_END NC_017375.1 1617426 1617426 DR NC_017375.1; contig end 1617426..1617426 Helicobacter pylori 83 YP_005784568.1 CDS nusB NC_017375.1 13 429 R COG: COG0781; Pfam: PF01029; InterPro: IPR006027; transcription antitermination factor NusB complement(13..429) Helicobacter pylori 83 12366036 YP_005784569.1 CDS ribH NC_017375.1 431 901 R COG: COG0054; Pfam: PF00885; InterPro: IPR002180; 6,7-dimethyl-8-ribityllumazine synthase complement(431..901) Helicobacter pylori 83 12366038 YP_005784570.1 CDS kdsA NC_017375.1 911 1741 R COG: COG2877; Pfam: PF00793; InterPro: IPR006218; 3-deoxy-7-phosphoheptulonate synthase complement(911..1741) Helicobacter pylori 83 12366040 YP_005784571.1 CDS cynT NC_017375.1 1728 2393 R COG: COG0288; Pfam: PF00484; InterPro: IPR001765; carbonate dehydratase complement(1728..2393) Helicobacter pylori 83 12366049 YP_005784572.1 CDS pyrF NC_017375.1 2516 3199 D COG: COG0284; Pfam: PF00215; InterPro: IPR013785; orotidine 5'-phosphate decarboxylase 2516..3199 Helicobacter pylori 83 12366051 YP_005784573.1 CDS panC NC_017375.1 3200 4030 D COG: COG0414; Pfam: PF02569; InterPro: IPR003721; pantoate--beta-alanine ligase 3200..4030 Helicobacter pylori 83 12366210 YP_005784574.1 CDS HMPREF0462_0007 NC_017375.1 4676 4885 D hypothetical protein 4676..4885 Helicobacter pylori 83 12364785 YP_005784575.1 CDS HMPREF0462_0008 NC_017375.1 4922 5092 R hypothetical protein complement(4922..5092) Helicobacter pylori 83 12364786 YP_005784576.1 CDS hopZ NC_017375.1 5219 7210 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopZ complement(5219..7210) Helicobacter pylori 83 12364787 YP_005784577.1 CDS HMPREF0462_0010 NC_017375.1 7416 7556 D hypothetical protein 7416..7556 Helicobacter pylori 83 12364788 YP_005784578.1 CDS groL NC_017375.1 7600 9240 R COG: COG0459; Pfam: PF00118; InterPro: IPR002423; chaperonin GroL complement(7600..9240) Helicobacter pylori 83 12364789 YP_005784579.1 CDS groES NC_017375.1 9266 9622 R COG: COG0234; Pfam: PF00166; InterPro: IPR001476; chaperone GroES complement(9266..9622) Helicobacter pylori 83 12364790 YP_005784580.1 CDS dnaG NC_017375.1 9897 11576 D COG: COG0358; Pfam: PF01807,PF08275,PF01751; InterPro: IPR006295; DNA primase 9897..11576 Helicobacter pylori 83 12364791 YP_005784581.1 CDS trmU NC_017375.1 11573 12625 D COG: COG0482; Pfam: PF06508; tRNA methyltransferase 11573..12625 Helicobacter pylori 83 12364792 YP_005784582.1 CDS HMPREF0462_0015 NC_017375.1 12714 13541 D hypothetical protein 12714..13541 Helicobacter pylori 83 12364793 YP_005784583.1 CDS HMPREF0462_0016 NC_017375.1 13686 13967 D hypothetical protein 13686..13967 Helicobacter pylori 83 12364794 YP_005784584.1 CDS HMPREF0462_0017 NC_017375.1 13967 14230 D hypothetical protein 13967..14230 Helicobacter pylori 83 12364795 YP_005784585.1 CDS virB4 NC_017375.1 14232 16595 D COG: COG3451; Pfam: PF03135; InterPro: IPR004346; DNA transfer protein 14232..16595 Helicobacter pylori 83 12364796 YP_005784586.1 CDS HMPREF0462_0019 NC_017375.1 16807 18237 D COG: COG3014; hypothetical protein 16807..18237 Helicobacter pylori 83 12364798 YP_005784587.1 CDS cheV NC_017375.1 18338 19303 D COG: COG0835; Pfam: PF01584,PF00072; InterPro: IPR002545; chemotaxis protein 18338..19303 Helicobacter pylori 83 12364799 YP_005784588.1 CDS nspC NC_017375.1 19300 20517 D COG: COG0019; Pfam: PF00278; InterPro: IPR005730; carboxynorspermidine decarboxylase 19300..20517 Helicobacter pylori 83 12364800 YP_005784589.1 CDS HMPREF0462_0022 NC_017375.1 20527 21099 R Pfam: PF01569; InterPro: IPR000326; lipid A 1-phosphatase complement(20527..21099) Helicobacter pylori 83 12364801 YP_005784590.1 CDS HMPREF0462_0023 NC_017375.1 21110 22675 R COG: COG2194; Pfam: PF08019,PF00884; InterPro: IPR000917; integral membrane protein complement(21110..22675) Helicobacter pylori 83 12364802 YP_005784591.1 CDS HMPREF0462_0024 NC_017375.1 22666 22842 D hypothetical protein 22666..22842 Helicobacter pylori 83 12364803 YP_005784592.1 CDS hopD NC_017375.1 23050 25122 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopD complement(23050..25122) Helicobacter pylori 83 12364804 YP_005784593.1 CDS HMPREF0462_0026 NC_017375.1 25819 26019 R hypothetical protein complement(25819..26019) Helicobacter pylori 83 12364805 YP_005784594.1 CDS tyrA NC_017375.1 26055 26882 R COG: COG0287; Pfam: PF02153; InterPro: IPR003099; prephenate dehydrogenase complement(26055..26882) Helicobacter pylori 83 12364806 YP_005784595.1 CDS lon NC_017375.1 26907 29402 R COG: COG0466; Pfam: PF02190,PF00004,PF05362; InterPro: IPR004815; ATP-dependent protease La complement(26907..29402) Helicobacter pylori 83 12364807 YP_005784596.1 CDS comL NC_017375.1 29443 30105 R COG: COG4105; competence lipoprotein complement(29443..30105) Helicobacter pylori 83 12364808 YP_005784597.1 CDS HMPREF0462_0030 NC_017375.1 30148 30294 R hypothetical protein complement(30148..30294) Helicobacter pylori 83 12364809 YP_005784598.1 CDS HMPREF0462_0031 NC_017375.1 30494 30895 D COG: COG1699; Pfam: PF02623; InterPro: IPR003775; flagellar assembly factor FliW 2 30494..30895 Helicobacter pylori 83 12364810 YP_005784599.1 CDS fabZ NC_017375.1 31080 31559 D COG: COG0764; Pfam: PF07977; InterPro: IPR010084; (3R)-hydroxymyristoyl-ACP dehydratase 31080..31559 Helicobacter pylori 83 12364811 YP_005784600.1 CDS lpxA NC_017375.1 31563 32375 D COG: COG1043; Pfam: PF00132; InterPro: IPR010137; acyl-CoA dehydrogenase 31563..32375 Helicobacter pylori 83 12364812 YP_005784601.1 CDS clpX NC_017375.1 32377 33723 D COG: COG1219; Pfam: PF07724; InterPro: IPR004487; ATP-dependent Clp protease ATP-binding subunit 32377..33723 Helicobacter pylori 83 12364813 YP_005784602.1 CDS HMPREF0462_0035 NC_017375.1 33766 34809 D COG: COG1077; Pfam: PF06723; InterPro: IPR004753; rod shape-determining protein 33766..34809 Helicobacter pylori 83 12364814 YP_005784603.1 CDS mreC NC_017375.1 34813 35559 D COG: COG1792; Pfam: PF04085; InterPro: IPR007221; rod shape-determining protein MreC 34813..35559 Helicobacter pylori 83 12364815 YP_005784604.1 CDS HMPREF0462_0037 NC_017375.1 35609 38515 R Pfam: PF04851; type III restriction enzyme R protein complement(35609..38515) Helicobacter pylori 83 12364816 YP_005784605.1 CDS HMPREF0462_0038 NC_017375.1 38525 39424 R COG: COG2189; Pfam: PF01555; InterPro: IPR002941; type III restriction enzyme M protein complement(38525..39424) Helicobacter pylori 83 12364817 YP_005784606.1 CDS HMPREF0462_0039 NC_017375.1 39559 39969 R COG: COG2189; Pfam: PF01555; InterPro: IPR002941; type III restriction enzyme M protein complement(39559..39969) Helicobacter pylori 83 12364818 YP_005784607.1 CDS HMPREF0462_0040 NC_017375.1 39982 40983 R type III restriction enzyme M protein complement(39982..40983) Helicobacter pylori 83 12364819 YP_005784608.1 CDS HMPREF0462_0041 NC_017375.1 41053 41694 D COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789; response regulator 41053..41694 Helicobacter pylori 83 12364820 YP_005784609.1 CDS HMPREF0462_0042 NC_017375.1 41729 42862 D COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594; signal-transducing protein 41729..42862 Helicobacter pylori 83 12364821 YP_005784610.1 CDS HMPREF0462_0043 NC_017375.1 42865 44259 D COG: COG0063; Pfam: PF03853,PF01256; InterPro: IPR000631; sugar kinase 42865..44259 Helicobacter pylori 83 12364822 YP_005784611.1 CDS dnaB NC_017375.1 44270 45736 D COG: COG0305; Pfam: PF00772,PF03796; InterPro: IPR007692; replicative DNA helicase DnaB 44270..45736 Helicobacter pylori 83 12364823 YP_005784612.1 CDS comE NC_017375.1 45733 47046 D COG: COG0658; Pfam: PF03772; InterPro: IPR004477; competence locus E 45733..47046 Helicobacter pylori 83 12364824 YP_005784613.1 CDS ubiA NC_017375.1 47075 47959 D COG: COG0382; Pfam: PF01040; InterPro: IPR006371; prenyltransferase 47075..47959 Helicobacter pylori 83 12364825 YP_005784614.1 CDS HMPREF0462_0047 NC_017375.1 47952 48446 D hypothetical protein 47952..48446 Helicobacter pylori 83 12364826 YP_005784615.1 CDS HMPREF0462_0048 NC_017375.1 48459 48962 D hypothetical protein 48459..48962 Helicobacter pylori 83 12364827 YP_005784616.1 CDS psd NC_017375.1 48959 49762 D COG: COG0688; Pfam: PF02666; InterPro: IPR005221; phosphatidylserine decarboxylase 48959..49762 Helicobacter pylori 83 12364828 YP_005784617.1 CDS nadA NC_017375.1 49752 50762 D COG: COG0379; Pfam: PF02445; InterPro: IPR003473; quinolinate synthetase 49752..50762 Helicobacter pylori 83 12364829 YP_005784618.1 CDS nadC NC_017375.1 50762 51583 D COG: COG0157; Pfam: PF02749,PF01729; InterPro: IPR004393; nicotinate-nucleotide diphosphorylase 50762..51583 Helicobacter pylori 83 12364830 YP_005784619.1 CDS HMPREF0462_0052 NC_017375.1 51607 54138 D adenine specific DNA methyltransferase 51607..54138 Helicobacter pylori 83 12364831 YP_005784620.1 CDS HMPREF0462_0053 NC_017375.1 54231 55199 D adenine specific DNA methyltransferase 54231..55199 Helicobacter pylori 83 12364832 YP_005784621.1 CDS babI NC_017375.1 55319 56398 D COG: COG0863; Pfam: PF01555; InterPro: IPR002941; modification methylase BabI 55319..56398 Helicobacter pylori 83 12364833 YP_005784622.1 CDS HMPREF0462_0055 NC_017375.1 56398 57291 D type II restriction endonuclease 56398..57291 Helicobacter pylori 83 12364834 YP_005784623.1 CDS ctpA NC_017375.1 57540 58904 D COG: COG0793; Pfam: PF00595,PF03572; InterPro: IPR004447; carboxy-terminal processing protease CtpA 57540..58904 Helicobacter pylori 83 12364835 YP_005784624.1 CDS HMPREF0462_0057 NC_017375.1 58911 60086 D hypothetical protein 58911..60086 Helicobacter pylori 83 12364836 YP_005784625.1 CDS plsC NC_017375.1 60073 60789 D COG: COG0204; Pfam: PF01553; InterPro: IPR002123; 1-acylglycerol-3-phosphate O-acyltransferase 60073..60789 Helicobacter pylori 83 12364837 YP_005784626.1 CDS ung NC_017375.1 60786 61487 D COG: COG0692; Pfam: PF03167; InterPro: IPR005122; uracil-DNA glycosylase 60786..61487 Helicobacter pylori 83 12364838 YP_005784627.1 CDS gap NC_017375.1 61576 62568 D COG: COG0057; Pfam: PF00044,PF02800; InterPro: IPR000173; glyceraldehyde-3-phosphate dehydrogenase 61576..62568 Helicobacter pylori 83 12364839 YP_005784628.1 CDS pgk NC_017375.1 62584 63792 D COG: COG0126; Pfam: PF00162; InterPro: IPR001576; phosphoglycerate kinase 62584..63792 Helicobacter pylori 83 12364840 YP_005784629.1 CDS corA NC_017375.1 63808 64770 D COG: COG0598; Pfam: PF01544; InterPro: IPR004488; MIT family metal ion transporter CorA 63808..64770 Helicobacter pylori 83 12364841 YP_005784630.1 CDS HMPREF0462_0063 NC_017375.1 64777 65505 D COG: COG0861; Pfam: PF03741; InterPro: IPR005496; membrane protein TerC 64777..65505 Helicobacter pylori 83 12364842 YP_005784631.1 CDS mboIBM NC_017375.1 65824 66522 R COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (adenine-specific) complement(65824..66522) Helicobacter pylori 83 12364843 YP_005784632.1 CDS ddeIM NC_017375.1 66519 67364 R COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase complement(66519..67364) Helicobacter pylori 83 12364844 YP_005784633.1 CDS putP NC_017375.1 67438 68937 R COG: COG0591; Pfam: PF00474; InterPro: IPR011851; SSS family proline:sodium (Na+) symporter complement(67438..68937) Helicobacter pylori 83 12364845 YP_005784634.1 CDS HMPREF0462_0067 NC_017375.1 68964 72521 R COG: COG1012; Pfam: PF01619,PF00171; InterPro: IPR015590; proline/pyrroline-5-carboxylate dehydrogenase complement(68964..72521) Helicobacter pylori 83 12364846 YP_005784635.1 CDS HMPREF0462_0068 NC_017375.1 72839 73048 D hypothetical protein 72839..73048 Helicobacter pylori 83 12364847 YP_005784636.1 CDS HMPREF0462_0069 NC_017375.1 73583 74020 D hypothetical protein 73583..74020 Helicobacter pylori 83 12364848 YP_005784637.1 CDS HMPREF0462_0070 NC_017375.1 74022 74306 D hypothetical protein 74022..74306 Helicobacter pylori 83 12364849 YP_005784638.1 CDS HMPREF0462_0071 NC_017375.1 74334 74705 D hypothetical protein 74334..74705 Helicobacter pylori 83 12364850 YP_005784639.1 CDS HMPREF0462_0072 NC_017375.1 74717 76039 D hypothetical protein 74717..76039 Helicobacter pylori 83 12364851 YP_005784640.1 CDS HMPREF0462_0073 NC_017375.1 76036 76209 D hypothetical protein 76036..76209 Helicobacter pylori 83 12364852 YP_005784641.1 CDS HMPREF0462_0074 NC_017375.1 76234 76797 D hypothetical protein 76234..76797 Helicobacter pylori 83 12364853 YP_005784642.1 CDS HMPREF0462_0075 NC_017375.1 76799 77026 D hypothetical protein 76799..77026 Helicobacter pylori 83 12364854 YP_005784643.1 CDS HMPREF0462_0076 NC_017375.1 77142 77711 D hypothetical protein 77142..77711 Helicobacter pylori 83 12364855 YP_005784644.1 CDS HMPREF0462_0077 NC_017375.1 77727 77855 D hypothetical protein 77727..77855 Helicobacter pylori 83 12364856 YP_005784645.1 CDS HMPREF0462_0078 NC_017375.1 77997 78383 D hypothetical protein 77997..78383 Helicobacter pylori 83 12364857 YP_005784646.1 CDS HMPREF0462_0079 NC_017375.1 78358 79110 D hypothetical protein 78358..79110 Helicobacter pylori 83 12364858 YP_005784647.1 CDS xerD NC_017375.1 79123 80088 D COG: COG0582; Pfam: PF00589; InterPro: IPR013762; integrase/recombinase 79123..80088 Helicobacter pylori 83 12364859 YP_005784648.1 CDS HMPREF0462_0081 NC_017375.1 80504 81481 R Pfam: PF07804; hypothetical protein complement(80504..81481) Helicobacter pylori 83 12364860 YP_005784649.1 CDS HMPREF0462_0082 NC_017375.1 81671 82441 D hypothetical protein 81671..82441 Helicobacter pylori 83 12364861 YP_005784650.1 CDS HMPREF0462_0083 NC_017375.1 82463 83719 R hypothetical protein complement(82463..83719) Helicobacter pylori 83 12364862 YP_005784651.1 CDS HMPREF0462_0084 NC_017375.1 83716 84966 R hypothetical protein complement(83716..84966) Helicobacter pylori 83 12364863 YP_005784652.1 CDS HMPREF0462_0085 NC_017375.1 84963 85616 R hypothetical protein complement(84963..85616) Helicobacter pylori 83 12364864 YP_005784653.1 CDS HMPREF0462_0086 NC_017375.1 85843 86001 R hypothetical protein complement(85843..86001) Helicobacter pylori 83 12364865 YP_005784654.1 CDS HMPREF0462_0087 NC_017375.1 86011 88080 R hypothetical protein complement(86011..88080) Helicobacter pylori 83 12364866 YP_005784655.1 CDS HMPREF0462_0088 NC_017375.1 88080 89147 R hypothetical protein complement(88080..89147) Helicobacter pylori 83 12364867 YP_005784656.1 CDS HMPREF0462_0089 NC_017375.1 89148 89312 R hypothetical protein complement(89148..89312) Helicobacter pylori 83 12364868 YP_005784657.1 CDS HMPREF0462_0090 NC_017375.1 89946 90623 D COG: COG1192; Pfam: PF01656; InterPro: IPR002586; PARA protein 89946..90623 Helicobacter pylori 83 12364869 YP_005784658.1 CDS HMPREF0462_0091 NC_017375.1 90605 91042 D hypothetical protein 90605..91042 Helicobacter pylori 83 12364870 YP_005784659.1 CDS HMPREF0462_0092 NC_017375.1 91020 91592 D hypothetical protein 91020..91592 Helicobacter pylori 83 12364871 YP_005784660.1 CDS HMPREF0462_0093 NC_017375.1 91714 92514 R Pfam: PF08843; InterPro: IPR014942; hypothetical protein complement(91714..92514) Helicobacter pylori 83 12364872 YP_005784661.1 CDS HMPREF0462_0094 NC_017375.1 92484 92969 R hypothetical protein complement(92484..92969) Helicobacter pylori 83 12364873 YP_005784662.1 CDS topA NC_017375.1 93009 93227 R topoisomerase I complement(93009..93227) Helicobacter pylori 83 12364874 YP_005784663.1 CDS tnpA NC_017375.1 93294 93740 R COG: COG1943; Pfam: PF01797; InterPro: IPR002686; transposase complement(93294..93740) Helicobacter pylori 83 12364875 YP_005784664.1 CDS tnpB NC_017375.1 93792 94139 D COG: COG0675; Pfam: PF01385; InterPro: IPR001959; transposase 93792..94139 Helicobacter pylori 83 12364876 YP_005784665.1 CDS tnpB2 NC_017375.1 94214 95074 D COG: COG0675; Pfam: PF01385,PF07282; InterPro: IPR001959; transposase 94214..95074 Helicobacter pylori 83 12364877 YP_005784666.1 CDS HMPREF0462_0099 NC_017375.1 95071 95715 R Pfam: PF01856; hypothetical protein complement(95071..95715) Helicobacter pylori 83 12364878 YP_005784667.1 CDS HMPREF0462_0100 NC_017375.1 95728 97572 R hypothetical protein complement(95728..97572) Helicobacter pylori 83 12364879 YP_005784668.1 CDS HMPREF0462_0101 NC_017375.1 97500 98015 R hypothetical protein complement(97500..98015) Helicobacter pylori 83 12364880 YP_005784669.1 CDS trbI NC_017375.1 97999 99201 R COG: COG2948; Pfam: PF03743; InterPro: IPR005498; conjugal transfer protein TrbI complement(97999..99201) Helicobacter pylori 83 12364881 YP_005784670.1 CDS comB NC_017375.1 99198 99674 R COG: COG3504; Pfam: PF03524; competence factor transporter ComB complement(99198..99674) Helicobacter pylori 83 12364882 YP_005784671.1 CDS HMPREF0462_0104 NC_017375.1 99770 100213 R hypothetical protein complement(99770..100213) Helicobacter pylori 83 12364883 YP_005784672.1 CDS HMPREF0462_0105 NC_017375.1 100233 100868 R hypothetical protein complement(100233..100868) Helicobacter pylori 83 12364884 YP_005784673.1 CDS comB2 NC_017375.1 100865 101998 R COG: COG3736; Pfam: PF04335; InterPro: IPR007430; competence factor transporter ComB complement(100865..101998) Helicobacter pylori 83 12364885 YP_005784674.1 CDS HMPREF0462_0107 NC_017375.1 101991 102125 R VirB7 complement(101991..102125) Helicobacter pylori 83 12364886 YP_005784675.1 CDS HMPREF0462_0108 NC_017375.1 102127 104703 R COG: COG3451; Pfam: PF03135; InterPro: IPR004346; virB4-like protein complement(102127..104703) Helicobacter pylori 83 12364887 YP_005784676.1 CDS HMPREF0462_0109 NC_017375.1 104703 104957 R hypothetical protein complement(104703..104957) Helicobacter pylori 83 12364888 YP_005784677.1 CDS HMPREF0462_0110 NC_017375.1 104950 105213 R hypothetical protein complement(104950..105213) Helicobacter pylori 83 12364889 YP_005784678.1 CDS HMPREF0462_0111 NC_017375.1 105224 105508 R conjugal transfer protein TrbC complement(105224..105508) Helicobacter pylori 83 12364890 YP_005784679.1 CDS HMPREF0462_0112 NC_017375.1 105505 106059 R hypothetical protein complement(105505..106059) Helicobacter pylori 83 12364891 YP_005784680.1 CDS HMPREF0462_0113 NC_017375.1 106088 106672 R hypothetical protein complement(106088..106672) Helicobacter pylori 83 12364892 YP_005784681.1 CDS HMPREF0462_0114 NC_017375.1 106675 106875 R hypothetical protein complement(106675..106875) Helicobacter pylori 83 12364893 YP_005784682.1 CDS HMPREF0462_0115 NC_017375.1 107099 107449 D hypothetical protein 107099..107449 Helicobacter pylori 83 12364894 YP_005784683.1 CDS HMPREF0462_0116 NC_017375.1 107446 109722 D COG: COG1674; Pfam: PF01580; InterPro: IPR002543; ATP-binding protein 107446..109722 Helicobacter pylori 83 12364895 YP_005784684.1 CDS HMPREF0462_0117 NC_017375.1 109752 109871 D hypothetical protein 109752..109871 Helicobacter pylori 83 12364896 YP_005784685.1 CDS ureD NC_017375.1 109928 110725 R COG: COG0829; Pfam: PF01774; InterPro: IPR002669; urease accessory protein UreD complement(109928..110725) Helicobacter pylori 83 12364897 YP_005784686.1 CDS ureG NC_017375.1 110725 111324 R COG: COG0378; Pfam: PF02492; InterPro: IPR004400; urease accessory protein UreG complement(110725..111324) Helicobacter pylori 83 12364898 YP_005784687.1 CDS ureF NC_017375.1 111353 112123 R COG: COG0830; Pfam: PF01730; InterPro: IPR002639; urease accessory protein UreF complement(111353..112123) Helicobacter pylori 83 12364899 YP_005784688.1 CDS ureE NC_017375.1 112136 112648 R COG: COG2371; Pfam: PF02814,PF05194; InterPro: IPR007864; urease accessory protein UreE complement(112136..112648) Helicobacter pylori 83 12364900 YP_005784689.1 CDS ureI NC_017375.1 112650 113258 R Pfam: PF02293; InterPro: IPR003211; urease accessory protein / pH-dependent urea-transporter complement(112650..113258) Helicobacter pylori 83 12364901 YP_005784690.1 CDS ureC NC_017375.1 113430 115139 R COG: COG0804; Pfam: PF00449,PF01979; InterPro: IPR005848; urease alpha subunit complement(113430..115139) Helicobacter pylori 83 12364902 YP_005784691.1 CDS ureA NC_017375.1 115143 115859 R COG: COG0832; Pfam: PF00547,PF00699; InterPro: IPR002019; urease subunit gamma complement(115143..115859) Helicobacter pylori 83 12364903 YP_005784692.1 CDS lspA NC_017375.1 116220 116693 R COG: COG0597; Pfam: PF01252; InterPro: IPR001872; signal peptidase II complement(116220..116693) Helicobacter pylori 83 12364905 YP_005784693.1 CDS glmM NC_017375.1 116687 118024 R COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR006352; phosphoglucosamine mutase complement(116687..118024) Helicobacter pylori 83 12364906 YP_005784694.1 CDS rpsT NC_017375.1 118114 118383 D COG: COG0268; Pfam: PF01649; InterPro: IPR002583; 30S ribosomal protein S20 118114..118383 Helicobacter pylori 83 12364907 YP_005784695.1 CDS prfA NC_017375.1 118500 119558 D COG: COG0216; Pfam: PF03462,PF00472; InterPro: IPR004373; peptide chain release factor RF1 118500..119558 Helicobacter pylori 83 12364908 YP_005784696.1 CDS HMPREF0462_0129 NC_017375.1 119975 120211 D reminiscent outer membrane protein HorA 119975..120211 Helicobacter pylori 83 12364909 YP_005784697.1 CDS horA NC_017375.1 120222 120917 D outer membrane protein HorA 120222..120917 Helicobacter pylori 83 12364910 YP_005784698.1 CDS HMPREF0462_0131 NC_017375.1 120904 121377 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 120904..121377 Helicobacter pylori 83 12364911 YP_005784699.1 CDS HMPREF0462_0132 NC_017375.1 121773 123539 D hypothetical protein 121773..123539 Helicobacter pylori 83 12364912 YP_005784700.1 CDS HMPREF0462_0133 NC_017375.1 123818 123982 D hypothetical protein 123818..123982 Helicobacter pylori 83 12364913 YP_005784701.1 CDS tlpC NC_017375.1 123953 125974 R COG: COG0840; Pfam: PF00672,PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein complement(123953..125974) Helicobacter pylori 83 12364914 YP_005784702.1 CDS rpsI NC_017375.1 126128 126517 R COG: COG0103; Pfam: PF00380; InterPro: IPR000754; 30S ribosomal protein S9 complement(126128..126517) Helicobacter pylori 83 12364915 YP_005784703.1 CDS rplM NC_017375.1 126514 126939 R COG: COG0102; Pfam: PF00572; InterPro: IPR005823; 50S ribosomal protein L13 complement(126514..126939) Helicobacter pylori 83 12364916 YP_005784704.1 CDS HMPREF0462_0137 NC_017375.1 127065 127232 R hypothetical protein complement(127065..127232) Helicobacter pylori 83 12364917 YP_005784705.1 CDS HMPREF0462_0138 NC_017375.1 127249 127437 R hypothetical protein complement(127249..127437) Helicobacter pylori 83 12364918 YP_005784706.1 CDS mdh NC_017375.1 127444 128796 R COG: COG0579; Pfam: PF01266; malate dehydrogenase (acceptor) complement(127444..128796) Helicobacter pylori 83 12364919 YP_005784707.1 CDS HMPREF0462_0140 NC_017375.1 128850 130226 R COG: COG0791; Pfam: PF00877; InterPro: IPR000064; hypothetical protein complement(128850..130226) Helicobacter pylori 83 12364920 YP_005784708.1 CDS rpoD NC_017375.1 130247 132271 R COG: COG0568; Pfam: PF00140,PF04542,PF04539,PF04545; InterPro: IPR012760; DNA-directed RNA polymerase sigma subunit RpoD complement(130247..132271) Helicobacter pylori 83 12364921 YP_005784709.1 CDS mtnN NC_017375.1 132455 133168 R COG: COG0775; Pfam: PF01048; InterPro: IPR000845; MTA/SAH nucleosidase complement(132455..133168) Helicobacter pylori 83 12364922 YP_005784710.1 CDS fabD NC_017375.1 133161 134090 R COG: COG0331; Pfam: PF00698; InterPro: IPR001227; malonyl-CoA-[acyl-carrier-protein] transacylase complement(133161..134090) Helicobacter pylori 83 12364923 YP_005784711.1 CDS HMPREF0462_0144 NC_017375.1 134530 135135 D Pfam: PF04373; InterPro: IPR007468; HrgA protein 134530..135135 Helicobacter pylori 83 12364925 YP_005784712.1 CDS HMPREF0462_0145 NC_017375.1 135156 135557 D Pfam: PF04373; InterPro: IPR007468; HrgA protein 135156..135557 Helicobacter pylori 83 12364926 YP_005784713.1 CDS ccrM NC_017375.1 135523 136344 D COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 135523..136344 Helicobacter pylori 83 12364927 YP_005784714.1 CDS HMPREF0462_0147 NC_017375.1 136367 136807 R Pfam: PF01531; InterPro: IPR002516; alpha-1,2-fucosyltransferase complement(136367..136807) Helicobacter pylori 83 12364928 YP_005784715.1 CDS HMPREF0462_0148 NC_017375.1 136804 137262 R alpha-1,2-fucosyltransferase complement(136804..137262) Helicobacter pylori 83 12364929 YP_005784716.1 CDS HMPREF0462_0149 NC_017375.1 137374 137904 R hypothetical protein complement(137374..137904) Helicobacter pylori 83 12364930 YP_005784717.1 CDS hprA NC_017375.1 137977 138921 D COG: COG1052; Pfam: PF00389,PF02826; InterPro: IPR006139; glycerate dehydrogenase 137977..138921 Helicobacter pylori 83 12364931 YP_005784718.1 CDS HMPREF0462_0151 NC_017375.1 139279 139992 R hypothetical protein complement(139279..139992) Helicobacter pylori 83 12364932 YP_005784719.1 CDS thrC NC_017375.1 140098 141558 R COG: COG0498; Pfam: PF00291; InterPro: IPR004450; threonine synthase complement(140098..141558) Helicobacter pylori 83 12364933 YP_005784720.1 CDS HMPREF0462_0153 NC_017375.1 141604 141747 R hypothetical protein complement(141604..141747) Helicobacter pylori 83 12364934 YP_005784721.1 CDS tlpA NC_017375.1 141762 143789 D COG: COG0840; Pfam: PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 141762..143789 Helicobacter pylori 83 12364935 YP_005784722.1 CDS HMPREF0462_0155 NC_017375.1 143789 144895 D COG: COG1636; Pfam: PF02677; InterPro: IPR003828; hypothetical protein 143789..144895 Helicobacter pylori 83 12364936 YP_005784723.1 CDS HMPREF0462_0156 NC_017375.1 145029 145790 D Pfam: PF01856; outer membrane protein 145029..145790 Helicobacter pylori 83 12364937 YP_005784724.1 CDS wbyL NC_017375.1 145773 146555 R COG: COG0463; Pfam: PF00535; InterPro: IPR001173; glycosyl transferase family protein complement(145773..146555) Helicobacter pylori 83 12364938 YP_005784725.1 CDS tlpB NC_017375.1 146586 148283 R Pfam: PF00672,PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein complement(146586..148283) Helicobacter pylori 83 12364939 YP_005784726.1 CDS cpdB NC_017375.1 148490 150235 R COG: COG0737; Pfam: PF00149,PF02872; InterPro: IPR006179; phosphatase/nucleotidase complement(148490..150235) Helicobacter pylori 83 12364940 YP_005784727.1 CDS luxS NC_017375.1 150384 150851 R COG: COG1854; Pfam: PF02664; InterPro: IPR003815; S-ribosylhomocysteinase complement(150384..150851) Helicobacter pylori 83 12364941 YP_005784728.1 CDS metC NC_017375.1 150886 152028 R COG: COG0626; Pfam: PF01053; InterPro: IPR000277; cystathionine beta-lyase complement(150886..152028) Helicobacter pylori 83 12364942 YP_005784729.1 CDS cysK NC_017375.1 152049 152969 R COG: COG0031; Pfam: PF00291; InterPro: IPR001926; cysteine synthase A complement(152049..152969) Helicobacter pylori 83 12364943 YP_005784730.1 CDS dnaK NC_017375.1 153208 155070 R COG: COG0443; Pfam: PF00012; InterPro: IPR012725; chaperone DnaK complement(153208..155070) Helicobacter pylori 83 12364944 YP_005784731.1 CDS grpE NC_017375.1 155101 155676 R COG: COG0576; Pfam: PF01025; InterPro: IPR000740; co-chaperone GrpE complement(155101..155676) Helicobacter pylori 83 12364945 YP_005784732.1 CDS HMPREF0462_0165 NC_017375.1 155676 156506 R COG: COG1420; InterPro: IPR011991; heat-inducible transcription repressor HrcA complement(155676..156506) Helicobacter pylori 83 12364946 YP_005784733.1 CDS HMPREF0462_0166 NC_017375.1 156726 157364 D COG: COG0235; Pfam: PF00596; InterPro: IPR001303; L-fuculose phosphate aldolase 156726..157364 Helicobacter pylori 83 12364947 YP_005784734.1 CDS HMPREF0462_0167 NC_017375.1 157385 157681 D hypothetical protein 157385..157681 Helicobacter pylori 83 12364948 YP_005784735.1 CDS maf NC_017375.1 157708 159594 R COG: COG2604; Pfam: PF01973; InterPro: IPR002826; motility accessory factor complement(157708..159594) Helicobacter pylori 83 12364949 YP_005784736.1 CDS HMPREF0462_0169 NC_017375.1 159654 161198 R COG: COG1344; Pfam: PF00669,PF07196,PF00700; InterPro: IPR001492; flagellin B complement(159654..161198) Helicobacter pylori 83 12364950 YP_005784737.1 CDS topA2 NC_017375.1 161364 163574 D COG: COG0550; Pfam: PF01751,PF01131,PF01396; InterPro: IPR005733; DNA topoisomerase TopA 161364..163574 Helicobacter pylori 83 12364951 YP_005784738.1 CDS HMPREF0462_0171 NC_017375.1 163564 164493 D COG: COG0731; Pfam: PF04055; radical SAM domain-containing protein 163564..164493 Helicobacter pylori 83 12364952 YP_005784739.1 CDS HMPREF0462_0172 NC_017375.1 164591 165751 R Pfam: PF05917; InterPro: IPR008592; hypothetical protein complement(164591..165751) Helicobacter pylori 83 12364953 YP_005784740.1 CDS HMPREF0462_0173 NC_017375.1 166030 167217 R Pfam: PF05917; InterPro: IPR008592; hypothetical protein complement(166030..167217) Helicobacter pylori 83 12364954 YP_005784741.1 CDS ppsA NC_017375.1 167316 169754 R COG: COG0574; Pfam: PF01326,PF00391,PF02896; InterPro: IPR006319; phosphoenolpyruvate synthase complement(167316..169754) Helicobacter pylori 83 12364955 YP_005784742.1 CDS thrS NC_017375.1 170116 171954 D COG: COG0441; Pfam: PF07973,PF00587,PF03129; InterPro: IPR002320; threonine--tRNA ligase 170116..171954 Helicobacter pylori 83 12364956 YP_005784743.1 CDS infC NC_017375.1 171951 172562 D COG: COG0290; Pfam: PF05198,PF00707; InterPro: IPR001288; translation initiation factor IF3 171951..172562 Helicobacter pylori 83 12364957 YP_005784744.1 CDS rpmI NC_017375.1 172543 172737 D COG: COG0291; Pfam: PF01632; InterPro: IPR001706; 50S ribosomal protein L35 172543..172737 Helicobacter pylori 83 12364958 YP_005784745.1 CDS rplT NC_017375.1 172832 173182 D COG: COG0292; Pfam: PF00453; InterPro: IPR005813; 50S ribosomal protein L20 172832..173182 Helicobacter pylori 83 12364959 YP_005784746.1 CDS HMPREF0462_0179 NC_017375.1 173382 174242 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 173382..174242 Helicobacter pylori 83 12364960 YP_005784747.1 CDS HMPREF0462_0180 NC_017375.1 174294 174419 D hypothetical protein 174294..174419 Helicobacter pylori 83 12364961 YP_005784748.1 CDS HMPREF0462_0181 NC_017375.1 174597 175028 D Pfam: PF06518; InterPro: IPR009488; hypothetical protein 174597..175028 Helicobacter pylori 83 12364962 YP_005784749.1 CDS HMPREF0462_0182 NC_017375.1 175175 175342 D hypothetical protein 175175..175342 Helicobacter pylori 83 12364963 YP_005784750.1 CDS HMPREF0462_0183 NC_017375.1 175434 176303 D hypothetical protein 175434..176303 Helicobacter pylori 83 12364964 YP_005784751.1 CDS HMPREF0462_0184 NC_017375.1 176517 176636 D hypothetical protein 176517..176636 Helicobacter pylori 83 12364965 YP_005784752.1 CDS HMPREF0462_0185 NC_017375.1 176714 176920 D hypothetical protein 176714..176920 Helicobacter pylori 83 12364966 YP_005784753.1 CDS sdaA NC_017375.1 177165 178532 R COG: COG1760; Pfam: PF03315,PF03313; InterPro: IPR004644; L-serine ammonia-lyase complement(177165..178532) Helicobacter pylori 83 12364967 YP_005784754.1 CDS sdaC NC_017375.1 178532 179773 R COG: COG0814; Pfam: PF01490; InterPro: IPR004694; HAAAP family serine/threonine permease complement(178532..179773) Helicobacter pylori 83 12364968 YP_005784755.1 CDS aroF NC_017375.1 179945 181303 D COG: COG3200; Pfam: PF01474; InterPro: IPR002480; phospho-2-dehydro-3-deoxyheptonate aldolase 179945..181303 Helicobacter pylori 83 12364969 YP_005784756.1 CDS HMPREF0462_0189 NC_017375.1 181382 181516 D hypothetical protein 181382..181516 Helicobacter pylori 83 12364970 YP_005784757.1 CDS bcp NC_017375.1 181746 182204 R COG: COG1225; Pfam: PF00578; InterPro: IPR012335; bacterioferritin comigratory protein complement(181746..182204) Helicobacter pylori 83 12364971 YP_005784758.1 CDS HMPREF0462_0191 NC_017375.1 182214 182849 R COG: COG1556; Pfam: PF02589; InterPro: IPR003741; hypothetical protein complement(182214..182849) Helicobacter pylori 83 12364972 YP_005784759.1 CDS HMPREF0462_0192 NC_017375.1 182842 184287 R COG: COG1139; Pfam: PF02589,PF00037; InterPro: IPR004452; iron-sulfur cluster-binding protein complement(182842..184287) Helicobacter pylori 83 12364973 YP_005784760.1 CDS HMPREF0462_0193 NC_017375.1 184316 185080 R COG: COG0247; Pfam: PF02754; InterPro: IPR004017; hypothetical protein complement(184316..185080) Helicobacter pylori 83 12364974 YP_005784761.1 CDS lctP NC_017375.1 185266 186915 D COG: COG1620; Pfam: PF02652; InterPro: IPR003804; L-lactate permease 185266..186915 Helicobacter pylori 83 12364975 YP_005784762.1 CDS HMPREF0462_0195 NC_017375.1 186963 188618 D COG: COG1620; Pfam: PF02652; InterPro: IPR003804; L-lactate permease 186963..188618 Helicobacter pylori 83 12364976 YP_005784763.1 CDS mutY NC_017375.1 188642 189511 R COG: COG1194; Pfam: PF00730,PF00633; InterPro: IPR003265; A/G-specific adenine glycosylase complement(188642..189511) Helicobacter pylori 83 12364977 YP_005784764.1 CDS citT NC_017375.1 189629 191077 R COG: COG0471; Pfam: PF00939; InterPro: IPR001898; DASS family divalent anion:sodium (Na+) symporter complement(189629..191077) Helicobacter pylori 83 12364978 YP_005784765.1 CDS ccoN NC_017375.1 191247 192713 D COG: COG3278; Pfam: PF00115; InterPro: IPR004677; cytochrome c oxidase 191247..192713 Helicobacter pylori 83 12364979 YP_005784766.1 CDS ccoO NC_017375.1 192726 193424 D COG: COG2993; Pfam: PF02433; InterPro: IPR003468; cytochrome c oxidase 192726..193424 Helicobacter pylori 83 12364980 YP_005784767.1 CDS HMPREF0462_0200 NC_017375.1 193432 193653 D COG: COG4736; InterPro: IPR014107; cytochrome c oxidase 193432..193653 Helicobacter pylori 83 12364981 YP_005784768.1 CDS ccoP NC_017375.1 193655 194533 D COG: COG2010; Pfam: PF00034; InterPro: IPR004678; cytochrome c oxidase 193655..194533 Helicobacter pylori 83 12364982 YP_005784769.1 CDS HMPREF0462_0202 NC_017375.1 194544 194750 D hypothetical protein 194544..194750 Helicobacter pylori 83 12364983 YP_005784770.1 CDS HMPREF0462_0203 NC_017375.1 194851 195435 D hypothetical protein 194851..195435 Helicobacter pylori 83 12364984 YP_005784771.1 CDS HMPREF0462_0204 NC_017375.1 195447 196028 D hypothetical protein 195447..196028 Helicobacter pylori 83 12364985 YP_005784772.1 CDS HMPREF0462_0205 NC_017375.1 196116 196883 D hypothetical protein 196116..196883 Helicobacter pylori 83 12364986 YP_005784773.1 CDS HMPREF0462_0206 NC_017375.1 196880 197851 R COG: COG2107; Pfam: PF02642; InterPro: IPR003794; hypothetical protein complement(196880..197851) Helicobacter pylori 83 12364987 YP_005784774.1 CDS recA NC_017375.1 197845 198888 D COG: COG0468; Pfam: PF00154; InterPro: IPR013765; recombination protein A 197845..198888 Helicobacter pylori 83 12364988 YP_005784775.1 CDS eno NC_017375.1 198900 200180 D COG: COG0148; Pfam: PF03952,PF00113; InterPro: IPR000941; phosphopyruvate hydratase 198900..200180 Helicobacter pylori 83 12364989 YP_005784776.1 CDS HMPREF0462_0209 NC_017375.1 200173 200448 D hypothetical protein 200173..200448 Helicobacter pylori 83 12364990 YP_005784777.1 CDS HMPREF0462_0210 NC_017375.1 200459 201061 D hypothetical protein 200459..201061 Helicobacter pylori 83 12364991 YP_005784778.1 CDS aroK NC_017375.1 201066 201554 D COG: COG0703; Pfam: PF01202; InterPro: IPR000623; shikimate kinase 201066..201554 Helicobacter pylori 83 12364992 YP_005784779.1 CDS HMPREF0462_0212 NC_017375.1 201576 202532 D Pfam: PF02743; general glycosylation pathway protein 201576..202532 Helicobacter pylori 83 12364993 YP_005784780.1 CDS rfaJ NC_017375.1 202529 203647 R COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide 1,2-glucosyltransferase complement(202529..203647) Helicobacter pylori 83 12364994 YP_005784781.1 CDS hcpD NC_017375.1 203804 204721 D COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 203804..204721 Helicobacter pylori 83 12364995 YP_005784782.1 CDS HMPREF0462_0215 NC_017375.1 205490 206212 R COG: COG0217; Pfam: PF01709; InterPro: IPR002876; hypothetical protein complement(205490..206212) Helicobacter pylori 83 12364996 YP_005784783.1 CDS hemB NC_017375.1 206213 207184 R COG: COG0113; Pfam: PF00490; InterPro: IPR013785; porphobilinogen synthase complement(206213..207184) Helicobacter pylori 83 12364997 YP_005784784.1 CDS HMPREF0462_0217 NC_017375.1 207207 208541 R COG: COG0642; Pfam: PF00672,PF00512,PF02518; InterPro: IPR003660; signal-transducing protein complement(207207..208541) Helicobacter pylori 83 12364998 YP_005784785.1 CDS racR NC_017375.1 208567 209244 R COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789; DNA-binding response regulator complement(208567..209244) Helicobacter pylori 83 12364999 YP_005784786.1 CDS HMPREF0462_0219 NC_017375.1 209476 210000 R hypothetical protein complement(209476..210000) Helicobacter pylori 83 12365000 YP_005784787.1 CDS HMPREF0462_0220 NC_017375.1 209991 210254 R hypothetical protein complement(209991..210254) Helicobacter pylori 83 12365001 YP_005784788.1 CDS prtC NC_017375.1 210287 211567 R COG: COG0826; Pfam: PF01136; InterPro: IPR001539; HlyD family type I secretion membrane fusion protein complement(210287..211567) Helicobacter pylori 83 12365002 YP_005784789.1 CDS HMPREF0462_0222 NC_017375.1 211570 212289 R hypothetical protein complement(211570..212289) Helicobacter pylori 83 12365003 YP_005784790.1 CDS prfB NC_017375.1 212360 213517 R COG: COG1186; Pfam: PF03462,PF00472; InterPro: IPR004374; peptide chain release factor RF2 complement(212360..213517) Helicobacter pylori 83 12365004 YP_005784791.1 CDS HMPREF0462_0224 NC_017375.1 213507 213794 R molybdopterin biosynthesis protein complement(213507..213794) Helicobacter pylori 83 12365005 YP_005784792.1 CDS HMPREF0462_0225 NC_017375.1 213857 214066 R InterPro: IPR001453; molybdopterin biosynthesis protein complement(213857..214066) Helicobacter pylori 83 12365006 YP_005784793.1 CDS moeA NC_017375.1 214108 214530 R COG: COG0303; Pfam: PF03453; InterPro: IPR005110; molybdopterin biosynthesis protein complement(214108..214530) Helicobacter pylori 83 12365007 YP_005784794.1 CDS fliR NC_017375.1 214540 215307 R COG: COG1684; Pfam: PF01311; InterPro: IPR002010; flagellar biosynthetic protein FliR complement(214540..215307) Helicobacter pylori 83 12365008 YP_005784795.1 CDS HMPREF0462_0228 NC_017375.1 215301 216053 R Pfam: PF04401; InterPro: IPR007496; hypothetical protein complement(215301..216053) Helicobacter pylori 83 12365009 YP_005784796.1 CDS HMPREF0462_0229 NC_017375.1 216142 216330 R hypothetical protein complement(216142..216330) Helicobacter pylori 83 12365010 YP_005784797.1 CDS HMPREF0462_0230 NC_017375.1 216508 217407 D COG: COG0760; Pfam: PF00639; InterPro: IPR000297; cell binding factor 2 216508..217407 Helicobacter pylori 83 12365011 YP_005784798.1 CDS fba NC_017375.1 217424 218347 D COG: COG0191; Pfam: PF01116; InterPro: IPR000771; fructose-1,6-bisphosphate aldolase 217424..218347 Helicobacter pylori 83 12365012 YP_005784799.1 CDS efp NC_017375.1 218369 218932 D COG: COG0231; Pfam: PF08207,PF01132,PF09285; InterPro: IPR011768; elongation factor P 218369..218932 Helicobacter pylori 83 12365013 YP_005784800.1 CDS pseI NC_017375.1 219075 220103 R COG: COG2089; Pfam: PF03102,PF08666; InterPro: IPR013785; pseudaminic acid synthase complement(219075..220103) Helicobacter pylori 83 12365014 YP_005784801.1 CDS HMPREF0462_0234 NC_017375.1 220107 220748 R COG: COG1136; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein complement(220107..220748) Helicobacter pylori 83 12365015 YP_005784802.1 CDS lnt NC_017375.1 220748 222022 R COG: COG0815; Pfam: PF00795; InterPro: IPR004563; apolipoprotein N-acyltransferase complement(220748..222022) Helicobacter pylori 83 12365016 YP_005784803.1 CDS HMPREF0462_0236 NC_017375.1 222246 222953 D COG: COG1286; Pfam: PF02674; InterPro: IPR003825; hypothetical protein 222246..222953 Helicobacter pylori 83 12365017 YP_005784804.1 CDS lysS NC_017375.1 222963 224468 D COG: COG1190; Pfam: PF01336,PF00152; InterPro: IPR002313; lysine--tRNA ligase 222963..224468 Helicobacter pylori 83 12365018 YP_005784805.1 CDS glyA NC_017375.1 224468 225718 D COG: COG0112; Pfam: PF00464; InterPro: IPR001085; glycine hydroxymethyltransferase 224468..225718 Helicobacter pylori 83 12365019 YP_005784806.1 CDS HMPREF0462_0239 NC_017375.1 225729 226271 D Pfam: PF08966,PF01896; InterPro: IPR015061; DNA primase small subunit domain protein 225729..226271 Helicobacter pylori 83 12365020 YP_005784807.1 CDS HMPREF0462_0240 NC_017375.1 226293 227102 D hypothetical protein 226293..227102 Helicobacter pylori 83 12365021 YP_005784808.1 CDS HMPREF0462_0241 NC_017375.1 227457 228998 R COG: COG1479; Pfam: PF03235,PF07510; InterPro: IPR011089; hypothetical protein complement(227457..228998) Helicobacter pylori 83 12365022 YP_005784809.1 CDS HMPREF0462_0242 NC_017375.1 229302 229835 D COG: COG2862; Pfam: PF03350; InterPro: IPR005134; membrane protein 229302..229835 Helicobacter pylori 83 12365023 YP_005784810.1 CDS HMPREF0462_0243 NC_017375.1 229841 231349 R COG: COG1502; Pfam: PF00614; phospholipase D complement(229841..231349) Helicobacter pylori 83 12365024 YP_005784811.1 CDS frdB NC_017375.1 231371 232108 R COG: COG0479; Pfam: PF00111,PF00037; InterPro: IPR004489; fumarate reductase subunit B complement(231371..232108) Helicobacter pylori 83 12365025 YP_005784812.1 CDS frdA NC_017375.1 232101 234245 R COG: COG1053; Pfam: PF00890,PF02910; InterPro: IPR014006; fumarate reductase subunit A complement(232101..234245) Helicobacter pylori 83 12365026 YP_005784813.1 CDS frdC NC_017375.1 234255 235022 R COG: COG2009; Pfam: PF02967; InterPro: IPR004224; fumarate reductase respiratory complex complement(234255..235022) Helicobacter pylori 83 12365027 YP_005784814.1 CDS tpiA NC_017375.1 235236 235940 D COG: COG0149; Pfam: PF00121; InterPro: IPR013785; triose-phosphate isomerase 235236..235940 Helicobacter pylori 83 12365028 YP_005784815.1 CDS fabI NC_017375.1 235950 236777 D COG: COG0623; InterPro: IPR014358; enoyl-(acyl carrier protein) reductase 235950..236777 Helicobacter pylori 83 12365029 YP_005784816.1 CDS lpxD NC_017375.1 236787 237797 D COG: COG1044; Pfam: PF04613,PF00132; InterPro: IPR007691; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 236787..237797 Helicobacter pylori 83 12365030 YP_005784817.1 CDS metK NC_017375.1 237862 239019 D COG: COG0192; Pfam: PF00438,PF02772,PF02773; InterPro: IPR002133; methionine adenosyltransferase 237862..239019 Helicobacter pylori 83 12365031 YP_005784818.1 CDS ndk NC_017375.1 239086 239499 D COG: COG0105; Pfam: PF00334; InterPro: IPR001564; nucleoside diphosphate kinase 239086..239499 Helicobacter pylori 83 12365032 YP_005784819.1 CDS HMPREF0462_0252 NC_017375.1 239524 239880 D hypothetical protein 239524..239880 Helicobacter pylori 83 12365033 YP_005784820.1 CDS rpmF NC_017375.1 239896 240042 D COG: COG0333; Pfam: PF01783; InterPro: IPR002677; 50S ribosomal protein L32 239896..240042 Helicobacter pylori 83 12365034 YP_005784821.1 CDS plsX NC_017375.1 240120 241139 D COG: COG0416; Pfam: PF02504; InterPro: IPR003664; fatty acid/phospholipid synthesis protein PlsX 240120..241139 Helicobacter pylori 83 12365035 YP_005784822.1 CDS fabH NC_017375.1 241164 242156 D COG: COG0332; Pfam: PF08545,PF08541; InterPro: IPR004655; 3-oxoacyl-(acyl-carrier-protein) synthase III 241164..242156 Helicobacter pylori 83 12365036 YP_005784823.1 CDS HMPREF0462_0256 NC_017375.1 242177 242479 D hypothetical protein 242177..242479 Helicobacter pylori 83 12365037 YP_005784824.1 CDS HMPREF0462_0257 NC_017375.1 242770 243153 R hypothetical protein complement(242770..243153) Helicobacter pylori 83 12365038 YP_005784825.1 CDS HMPREF0462_0258 NC_017375.1 243214 243753 R hypothetical protein complement(243214..243753) Helicobacter pylori 83 12365039 YP_005784826.1 CDS HMPREF0462_0259 NC_017375.1 243830 245233 R hypothetical protein complement(243830..245233) Helicobacter pylori 83 12365040 YP_005784827.1 CDS HMPREF0462_0260 NC_017375.1 245465 246292 R hypothetical protein complement(245465..246292) Helicobacter pylori 83 12365041 YP_005784828.1 CDS mrp NC_017375.1 246392 247498 D COG: COG0489; Pfam: PF01883; InterPro: IPR002744; ATP/GTP-binding protein 246392..247498 Helicobacter pylori 83 12365042 YP_005784829.1 CDS rfaJ2 NC_017375.1 247512 248531 R COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide biosynthesis protein complement(247512..248531) Helicobacter pylori 83 12365043 YP_005784830.1 CDS rfaJ3 NC_017375.1 248555 248668 R Pfam: PF01501; lipopolysaccharide biosynthesis protein complement(248555..248668) Helicobacter pylori 83 12365044 YP_005784831.1 CDS hofE NC_017375.1 248783 250162 D Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 248783..250162 Helicobacter pylori 83 12365045 YP_005784832.1 CDS htpG NC_017375.1 250235 252100 D COG: COG0326; Pfam: PF02518,PF00183; InterPro: IPR001404; chaperone HtpG 250235..252100 Helicobacter pylori 83 12365046 YP_005784833.1 CDS hcpA NC_017375.1 252289 253041 R COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase complement(252289..253041) Helicobacter pylori 83 12365047 YP_005784834.1 CDS dapE NC_017375.1 253701 254918 R COG: COG0624; Pfam: PF01546,PF07687; InterPro: IPR005941; succinyl-diaminopimelate desuccinylase complement(253701..254918) Helicobacter pylori 83 12365048 YP_005784835.1 CDS gidA NC_017375.1 254878 256743 R COG: COG0445; Pfam: PF01134; InterPro: IPR004416; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA complement(254878..256743) Helicobacter pylori 83 12365049 YP_005784836.1 CDS hunaDC NC_017375.1 256839 258497 D COG: COG0471; Pfam: PF00939; InterPro: IPR001898; sodium-dependent transporter 256839..258497 Helicobacter pylori 83 12365050 YP_005784837.1 CDS cdsA NC_017375.1 258518 259318 D COG: COG0575; Pfam: PF01148; InterPro: IPR000374; phosphatidate cytidylyltransferase 258518..259318 Helicobacter pylori 83 12365051 YP_005784838.1 CDS dxr NC_017375.1 259319 260425 D COG: COG0743; Pfam: PF02670,PF08436; InterPro: IPR003821; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 259319..260425 Helicobacter pylori 83 12365052 YP_005784839.1 CDS HMPREF0462_0272 NC_017375.1 260477 261619 D Pfam: PF06306; InterPro: IPR010446; beta-1,4-N-acetylgalactosamyltransferase 260477..261619 Helicobacter pylori 83 12365053 YP_005784840.1 CDS HMPREF0462_0273 NC_017375.1 261634 262185 R COG: COG1881; Pfam: PF01161; InterPro: IPR008914; phospholipid-binding protein complement(261634..262185) Helicobacter pylori 83 12365054 YP_005784841.1 CDS HMPREF0462_0274 NC_017375.1 262335 262796 D hypothetical protein 262335..262796 Helicobacter pylori 83 12365055 YP_005784842.1 CDS nifS NC_017375.1 262969 264132 D COG: COG1104; Pfam: PF00266; InterPro: IPR000192; NifS family cysteine desulfurase 262969..264132 Helicobacter pylori 83 12365056 YP_005784843.1 CDS nifU NC_017375.1 264154 265134 D Pfam: PF01592,PF04324,PF01106; InterPro: IPR002871; NifU family protein 264154..265134 Helicobacter pylori 83 12365057 YP_005784844.1 CDS HMPREF0462_0277 NC_017375.1 265291 265524 D Pfam: PF01402; hypothetical protein 265291..265524 Helicobacter pylori 83 12365058 YP_005784845.1 CDS HMPREF0462_0278 NC_017375.1 265611 266981 D COG: COG1066; InterPro: IPR004504; DNA repair protein RadA 265611..266981 Helicobacter pylori 83 12365059 YP_005784846.1 CDS msrAB NC_017375.1 267106 268185 D COG: COG0225; Pfam: PF01625,PF01641; InterPro: IPR002569; methionine-S-sulfoxide reductase/methionine-R-sulfoxide reductase 267106..268185 Helicobacter pylori 83 12365060 YP_005784847.1 CDS HMPREF0462_0280 NC_017375.1 268814 269647 R COG: COG0730; Pfam: PF01925; InterPro: IPR002781; integral membrane protein complement(268814..269647) Helicobacter pylori 83 12365061 YP_005784848.1 CDS HMPREF0462_0281 NC_017375.1 269721 269879 R hypothetical protein complement(269721..269879) Helicobacter pylori 83 12365062 YP_005784849.1 CDS HMPREF0462_0282 NC_017375.1 269863 271770 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(269863..271770) Helicobacter pylori 83 12365063 YP_005784850.1 CDS HMPREF0462_0283 NC_017375.1 272146 273615 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(272146..273615) Helicobacter pylori 83 12365065 YP_005784851.1 CDS kdsB NC_017375.1 273809 274534 R COG: COG1212; Pfam: PF02348; InterPro: IPR004528; 3-deoxy-D-manno-octulosonate cytidylyltransferase complement(273809..274534) Helicobacter pylori 83 12365066 YP_005784852.1 CDS HMPREF0462_0285 NC_017375.1 274647 275444 D COG: COG1651; disulfide isomerase 274647..275444 Helicobacter pylori 83 12365067 YP_005784853.1 CDS HMPREF0462_0286 NC_017375.1 275460 276113 D secreted protein 275460..276113 Helicobacter pylori 83 12365068 YP_005784854.1 CDS HMPREF0462_0287 NC_017375.1 276138 277310 D COG: COG0754; Pfam: PF03738; InterPro: IPR005494; glutathionylspermidine synthase 276138..277310 Helicobacter pylori 83 12365069 YP_005784855.1 CDS HMPREF0462_0288 NC_017375.1 277310 277840 D hypothetical protein 277310..277840 Helicobacter pylori 83 12365070 YP_005784856.1 CDS hcpE NC_017375.1 278286 279353 R COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase complement(278286..279353) Helicobacter pylori 83 12365071 YP_005784857.1 CDS HMPREF0462_0290 NC_017375.1 279447 279818 R hypothetical protein complement(279447..279818) Helicobacter pylori 83 12365072 YP_005784858.1 CDS hemC NC_017375.1 279818 280738 R COG: COG0181; Pfam: PF01379,PF03900; InterPro: IPR000860; hydroxymethylbilane synthase complement(279818..280738) Helicobacter pylori 83 12365073 YP_005784859.1 CDS proS NC_017375.1 280749 282482 R COG: COG0442; Pfam: PF00587,PF04073,PF03129; InterPro: IPR004500; proline--tRNA ligase complement(280749..282482) Helicobacter pylori 83 12365074 YP_005784860.1 CDS hemA NC_017375.1 282486 283835 R COG: COG0373; Pfam: PF05201,PF01488,PF00745; InterPro: IPR000343; glutamyl-tRNA reductase complement(282486..283835) Helicobacter pylori 83 12365075 YP_005784861.1 CDS ispB NC_017375.1 283835 284758 R COG: COG0142; Pfam: PF00348; InterPro: IPR008949; polyprenyl synthetase complement(283835..284758) Helicobacter pylori 83 12365076 YP_005784862.1 CDS HMPREF0462_0295 NC_017375.1 284768 285163 R hypothetical protein complement(284768..285163) Helicobacter pylori 83 12365077 YP_005784863.1 CDS HMPREF0462_0296 NC_017375.1 285156 285440 R hypothetical protein complement(285156..285440) Helicobacter pylori 83 12365078 YP_005784864.1 CDS dps NC_017375.1 285461 285895 R COG: COG0783; Pfam: PF00210; InterPro: IPR012347; DNA starvation/stationary phase protection protein DpsA complement(285461..285895) Helicobacter pylori 83 12365079 YP_005784865.1 CDS atoS NC_017375.1 286101 287246 R COG: COG0642; Pfam: PF00512,PF02518; InterPro: IPR003594; sensor histidine kinase complement(286101..287246) Helicobacter pylori 83 12365080 YP_005784866.1 CDS HMPREF0462_0299 NC_017375.1 287243 287560 R hypothetical protein complement(287243..287560) Helicobacter pylori 83 12365081 YP_005784867.1 CDS flgI NC_017375.1 287557 288585 R COG: COG1706; Pfam: PF02119; InterPro: IPR001782; flagellar P-ring protein FlgI complement(287557..288585) Helicobacter pylori 83 12365082 YP_005784868.1 CDS deaD NC_017375.1 288779 290257 D COG: COG0513; Pfam: PF00270,PF00271; InterPro: IPR014001; ATP-dependent RNA helicase DeaD 288779..290257 Helicobacter pylori 83 12365083 YP_005784869.1 CDS HMPREF0462_0302 NC_017375.1 290278 291366 D COG: COG0330; Pfam: PF01145; InterPro: IPR001107; hypothetical protein 290278..291366 Helicobacter pylori 83 12365084 YP_005784870.1 CDS HMPREF0462_0303 NC_017375.1 291373 291912 D hypothetical protein 291373..291912 Helicobacter pylori 83 12365085 YP_005784871.1 CDS oppD NC_017375.1 291978 293528 R Pfam: PF00005,PF08352; InterPro: IPR003593; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein complement(291978..293528) Helicobacter pylori 83 12365086 YP_005784872.1 CDS oppC NC_017375.1 293538 294560 R COG: COG4239; Pfam: PF00528; InterPro: IPR000515; oligopeptide ABC superfamily ATP binding cassette transporter, permease protein complement(293538..294560) Helicobacter pylori 83 12365087 YP_005784873.1 CDS HMPREF0462_0306 NC_017375.1 294903 296348 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 294903..296348 Helicobacter pylori 83 12365089 YP_005784874.1 CDS HMPREF0462_0307 NC_017375.1 296361 297779 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 296361..297779 Helicobacter pylori 83 12365090 YP_005784875.1 CDS purA NC_017375.1 297878 299113 D COG: COG0104; Pfam: PF00709; InterPro: IPR001114; adenylosuccinate synthase 297878..299113 Helicobacter pylori 83 12365091 YP_005784876.1 CDS HMPREF0462_0309 NC_017375.1 299110 299538 D hypothetical protein 299110..299538 Helicobacter pylori 83 12365092 YP_005784877.1 CDS pdp NC_017375.1 299531 300190 D pdp protein 299531..300190 Helicobacter pylori 83 12365093 YP_005784878.1 CDS rseP NC_017375.1 300187 301236 D COG: COG0750; Pfam: PF02163; InterPro: IPR004387; RIP metalloprotease RseP 300187..301236 Helicobacter pylori 83 12365094 YP_005784879.1 CDS xseA NC_017375.1 301249 302523 D COG: COG1570; Pfam: PF01336,PF02601; InterPro: IPR003753; exodeoxyribonuclease VII large subunit 301249..302523 Helicobacter pylori 83 12365095 YP_005784880.1 CDS mod NC_017375.1 302520 303674 R COG: COG2189; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase complement(302520..303674) Helicobacter pylori 83 12365096 YP_005784881.1 CDS HMPREF0462_0314 NC_017375.1 303685 303939 R hypothetical protein complement(303685..303939) Helicobacter pylori 83 12365097 YP_005784882.1 CDS mjaVIP NC_017375.1 304225 304938 D endonuclease MjaVIP 304225..304938 Helicobacter pylori 83 12365098 YP_005784883.1 CDS hpaim NC_017375.1 304935 305693 D COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 304935..305693 Helicobacter pylori 83 12365099 YP_005784884.1 CDS clpB NC_017375.1 305765 308335 D COG: COG0542; Pfam: PF02861,PF00004,PF07724; InterPro: IPR003593; chaperone protein ClpB 305765..308335 Helicobacter pylori 83 12365100 YP_005784885.1 CDS HMPREF0462_0318 NC_017375.1 308389 309111 D COG: COG0785; Pfam: PF02683; InterPro: IPR003834; cytochrome c biogenesis protein 308389..309111 Helicobacter pylori 83 12365101 YP_005784886.1 CDS pyrC NC_017375.1 309121 310257 D COG: COG0044; dihydroorotase 309121..310257 Helicobacter pylori 83 12365102 YP_005784887.1 CDS HMPREF0462_0320 NC_017375.1 310242 311471 D COG: COG0402; Pfam: PF01979; InterPro: IPR006680; amidohydrolase 310242..311471 Helicobacter pylori 83 12365103 YP_005784888.1 CDS HMPREF0462_0321 NC_017375.1 311499 311774 D hypothetical protein 311499..311774 Helicobacter pylori 83 12365104 YP_005784889.1 CDS miaB NC_017375.1 311784 313097 D COG: COG0621; Pfam: PF00919,PF04055; InterPro: IPR005839; tRNA-I(6)A37 thiotransferase enzyme MiaB 311784..313097 Helicobacter pylori 83 12365105 YP_005784890.1 CDS HMPREF0462_0323 NC_017375.1 313137 313790 D COG: COG2121; Pfam: PF04028; InterPro: IPR007172; hypothetical protein 313137..313790 Helicobacter pylori 83 12365106 YP_005784891.1 CDS HMPREF0462_0324 NC_017375.1 313783 314763 D hypothetical protein 313783..314763 Helicobacter pylori 83 12365107 YP_005784892.1 CDS HMPREF0462_0325 NC_017375.1 314744 315286 D hypothetical protein 314744..315286 Helicobacter pylori 83 12365108 YP_005784893.1 CDS HMPREF0462_0326 NC_017375.1 315283 315822 D hypothetical protein 315283..315822 Helicobacter pylori 83 12365109 YP_005784894.1 CDS HMPREF0462_0327 NC_017375.1 315839 316237 D COG: COG0727; Pfam: PF03692; InterPro: IPR005358; hypothetical protein 315839..316237 Helicobacter pylori 83 12365110 YP_005784895.1 CDS addB NC_017375.1 316274 317569 D COG: COG0457; ATP-dependent nuclease 316274..317569 Helicobacter pylori 83 12365111 YP_005784896.1 CDS trpC NC_017375.1 317557 318114 D Indole-3-glycerol phosphate synthase 317557..318114 Helicobacter pylori 83 12365112 YP_005784897.1 CDS fdx NC_017375.1 318171 318425 D COG: COG1145; Pfam: PF00037; ferredoxin 318171..318425 Helicobacter pylori 83 12365113 YP_005784898.1 CDS gppA NC_017375.1 318435 319889 D COG: COG0248; Pfam: PF02541; InterPro: IPR003695; ppx/GppA family phosphatase 318435..319889 Helicobacter pylori 83 12365114 YP_005784899.1 CDS rfaC NC_017375.1 319886 320896 D COG: COG0859; Pfam: PF01075; InterPro: IPR011908; lipopolysaccharide heptosyltransferase I 319886..320896 Helicobacter pylori 83 12365115 YP_005784900.1 CDS ibpB NC_017375.1 320863 321879 D COG: COG1560; Pfam: PF03279; InterPro: IPR004960; chaperone IbpB 320863..321879 Helicobacter pylori 83 12365116 YP_005784901.1 CDS tgt NC_017375.1 321940 323055 R COG: COG0343; Pfam: PF01702; InterPro: IPR002616; tRNA-guanine transglycosylase complement(321940..323055) Helicobacter pylori 83 12365117 YP_005784902.1 CDS HMPREF0462_0335 NC_017375.1 323106 324548 D COG: COG3400; Pfam: PF02080; InterPro: IPR006037; hypothetical protein 323106..324548 Helicobacter pylori 83 12365118 YP_005784903.1 CDS aroB NC_017375.1 324555 325586 D COG: COG0337; Pfam: PF01761; InterPro: IPR016037; 3-dehydroquinate synthase 324555..325586 Helicobacter pylori 83 12365119 YP_005784904.1 CDS HMPREF0462_0337 NC_017375.1 325577 327148 D COG: COG0668; Pfam: PF00924; InterPro: IPR006685; mechanosensitive ion channel family protein 325577..327148 Helicobacter pylori 83 12365120 YP_005784905.1 CDS HMPREF0462_0338 NC_017375.1 327145 328401 D COG: COG0621; Pfam: PF00919,PF04055; InterPro: IPR005839; 2-methylthioadenine synthase 327145..328401 Helicobacter pylori 83 12365121 YP_005784906.1 CDS HMPREF0462_0339 NC_017375.1 328388 330040 D COG: COG0465; Pfam: PF00004; InterPro: IPR003959; cell division protein (ftsH) 328388..330040 Helicobacter pylori 83 12365122 YP_005784907.1 CDS HMPREF0462_0340 NC_017375.1 330037 330561 D hypothetical protein 330037..330561 Helicobacter pylori 83 12365123 YP_005784908.1 CDS HMPREF0462_0341 NC_017375.1 330574 331047 D hypothetical protein 330574..331047 Helicobacter pylori 83 12365124 YP_005784909.1 CDS HMPREF0462_0342 NC_017375.1 331110 331784 D Pfam: PF02691; InterPro: IPR003842; hypothetical protein 331110..331784 Helicobacter pylori 83 12365125 YP_005784910.1 CDS HMPREF0462_0343 NC_017375.1 331804 334629 D COG: COG5651; Pfam: PF03077; InterPro: IPR004311; hypothetical protein 331804..334629 Helicobacter pylori 83 12365126 YP_005784911.1 CDS HMPREF0462_0344 NC_017375.1 334626 338162 D COG: COG5651; Pfam: PF03077; InterPro: IPR004311; hypothetical protein 334626..338162 Helicobacter pylori 83 12365127 YP_005784912.1 CDS HMPREF0462_0345 NC_017375.1 338159 338653 D hypothetical protein 338159..338653 Helicobacter pylori 83 12365128 YP_005784913.1 CDS HMPREF0462_0346 NC_017375.1 338616 339833 D COG: COG5651; Pfam: PF03797; InterPro: IPR005546; hypothetical protein 338616..339833 Helicobacter pylori 83 12365129 YP_005784914.1 CDS lysA NC_017375.1 339881 341098 D COG: COG0019; Pfam: PF02784,PF00278; InterPro: IPR002986; diaminopimelate decarboxylase 339881..341098 Helicobacter pylori 83 12365130 YP_005784915.1 CDS HMPREF0462_0348 NC_017375.1 341103 341393 D COG: COG1605; Pfam: PF01817; InterPro: IPR002701; chorismate mutase 341103..341393 Helicobacter pylori 83 12365131 YP_005784916.1 CDS HMPREF0462_0349 NC_017375.1 341406 342278 D COG: COG4866; hypothetical protein 341406..342278 Helicobacter pylori 83 12365132 YP_005784917.1 CDS pabB NC_017375.1 342279 343958 D COG: COG0147; Pfam: PF00425; InterPro: IPR005801; para-aminobenzoate synthetase 342279..343958 Helicobacter pylori 83 12365133 YP_005784918.1 CDS amiE NC_017375.1 344153 345172 D COG: COG0388; Pfam: PF00795; InterPro: IPR003010; amidase 344153..345172 Helicobacter pylori 83 12365134 YP_005784919.1 CDS flgL NC_017375.1 345252 347738 R COG: COG1344; Pfam: PF00669; InterPro: IPR001029; flagellar hook-associated protein 3 complement(345252..347738) Helicobacter pylori 83 12365135 YP_005784920.1 CDS rplU NC_017375.1 348010 348324 D COG: COG0261; Pfam: PF00829; InterPro: IPR001787; 50S ribosomal protein L21 348010..348324 Helicobacter pylori 83 12365136 YP_005784921.1 CDS rpmA NC_017375.1 348339 348605 D COG: COG0211; Pfam: PF01016; InterPro: IPR001684; 50S ribosomal protein L27 348339..348605 Helicobacter pylori 83 12365137 YP_005784922.1 CDS hbpA NC_017375.1 348726 350375 D COG: COG0747; Pfam: PF00496; InterPro: IPR000914; heme ABC superfamily ATP binding cassette transporter, binding protein 348726..350375 Helicobacter pylori 83 12365138 YP_005784923.1 CDS dppB NC_017375.1 350385 351389 D COG: COG0601; Pfam: PF00528; InterPro: IPR000515; dipeptide ABC superfamily ATP binding cassette transporter, permease protein 350385..351389 Helicobacter pylori 83 12365139 YP_005784924.1 CDS dppC NC_017375.1 351389 352246 D COG: COG1173; Pfam: PF00528; InterPro: IPR000515; oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 351389..352246 Helicobacter pylori 83 12365140 YP_005784925.1 CDS HMPREF0462_0358 NC_017375.1 352258 353121 D COG: COG0444; Pfam: PF00005,PF08352; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 352258..353121 Helicobacter pylori 83 12365141 YP_005784926.1 CDS dppF NC_017375.1 353118 353924 D COG: COG4608; Pfam: PF00005,PF08352; InterPro: IPR003593; oligopeptide ABC superfamily ATP binding cassette transporter, ABC protein 353118..353924 Helicobacter pylori 83 12365142 YP_005784927.1 CDS cgtA NC_017375.1 353944 355026 D COG: COG0536; Pfam: PF01018,PF01926; InterPro: IPR014100; obg family GTPase CgtA 353944..355026 Helicobacter pylori 83 12365143 YP_005784928.1 CDS HMPREF0462_0361 NC_017375.1 355068 356063 D hypothetical protein 355068..356063 Helicobacter pylori 83 12365144 YP_005784929.1 CDS HMPREF0462_0362 NC_017375.1 356310 356864 D hypothetical protein 356310..356864 Helicobacter pylori 83 12365145 YP_005784930.1 CDS hemL NC_017375.1 356874 358166 D COG: COG0001; Pfam: PF00202; InterPro: IPR004639; glutamate-1-semialdehyde-2,1-aminomutase 356874..358166 Helicobacter pylori 83 12365146 YP_005784931.1 CDS HMPREF0462_0364 NC_017375.1 358159 358431 D hypothetical protein 358159..358431 Helicobacter pylori 83 12365147 YP_005784932.1 CDS HMPREF0462_0365 NC_017375.1 358452 358856 D hypothetical protein 358452..358856 Helicobacter pylori 83 12365148 YP_005784933.1 CDS HMPREF0462_0366 NC_017375.1 358940 359824 D COG: COG0388; Pfam: PF00795; InterPro: IPR003010; N-carbamoyl-D-amino acid amidohydrolase 358940..359824 Helicobacter pylori 83 12365149 YP_005784934.1 CDS HMPREF0462_0367 NC_017375.1 359837 360718 D COG: COG0726; Pfam: PF01522; InterPro: IPR002509; polysaccharide deacetylase 359837..360718 Helicobacter pylori 83 12365150 YP_005784935.1 CDS ddeIR NC_017375.1 360772 361464 R type II site-specific deoxyribonuclease complement(360772..361464) Helicobacter pylori 83 12365151 YP_005784936.1 CDS HMPREF0462_0369 NC_017375.1 361475 362584 R COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase complement(361475..362584) Helicobacter pylori 83 12365152 YP_005784937.1 CDS HMPREF0462_0370 NC_017375.1 362680 363057 D hypothetical protein 362680..363057 Helicobacter pylori 83 12365153 YP_005784938.1 CDS HMPREF0462_0371 NC_017375.1 363057 364022 D COG: COG0523; Pfam: PF02492,PF07683; InterPro: IPR003495; cobalamin synthesis protein 363057..364022 Helicobacter pylori 83 12365154 YP_005784939.1 CDS narK NC_017375.1 364028 365173 R COG: COG0477; Pfam: PF07690; InterPro: IPR011701; nitrite extrusion protein NarK complement(364028..365173) Helicobacter pylori 83 12365155 YP_005784940.1 CDS HMPREF0462_0373 NC_017375.1 365317 365547 D hypothetical protein 365317..365547 Helicobacter pylori 83 12365156 YP_005784941.1 CDS HMPREF0462_0374 NC_017375.1 365663 366418 R COG: COG0748; Pfam: PF01243; InterPro: IPR012349; heme iron utilization protein complement(365663..366418) Helicobacter pylori 83 12365157 YP_005784942.1 CDS argS NC_017375.1 366479 368104 R COG: COG0018; Pfam: PF03485,PF00750,PF05746; InterPro: IPR001278; arginine--tRNA ligase complement(366479..368104) Helicobacter pylori 83 12365158 YP_005784943.1 CDS HMPREF0462_0376 NC_017375.1 368107 368346 R Pfam: PF02416; InterPro: IPR003369; TAT family twin arginine targeting transporter complement(368107..368346) Helicobacter pylori 83 12365159 YP_005784944.1 CDS gmk NC_017375.1 368416 369036 R COG: COG0194; Pfam: PF00625; InterPro: IPR008145; guanylate kinase complement(368416..369036) Helicobacter pylori 83 12365160 YP_005784945.1 CDS HMPREF0462_0378 NC_017375.1 369029 370423 R poly E-rich protein complement(369029..370423) Helicobacter pylori 83 12365161 YP_005784946.1 CDS HMPREF0462_0379 NC_017375.1 370436 370561 R hypothetical protein complement(370436..370561) Helicobacter pylori 83 12365162 YP_005784947.1 CDS nuc NC_017375.1 370565 371107 D COG: COG1502; Pfam: PF00614; membrane bound endonuclease 370565..371107 Helicobacter pylori 83 12365163 YP_005784948.1 CDS HMPREF0462_0381 NC_017375.1 371114 371878 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(371114..371878) Helicobacter pylori 83 12365164 YP_005784949.1 CDS flgI2 NC_017375.1 371981 372694 D COG: COG2063; Pfam: PF02107; InterPro: IPR000527; flagellar L-ring protein FlgH 371981..372694 Helicobacter pylori 83 12365165 YP_005784950.1 CDS pseF NC_017375.1 372712 373395 D COG: COG1083; Pfam: PF02348; InterPro: IPR003329; pseudaminic acid CMP-transferase 372712..373395 Helicobacter pylori 83 12365166 YP_005784951.1 CDS neuA NC_017375.1 373386 374258 D COG: COG3980; Pfam: PF02348; N-acylneuraminate cytidylyltransferase 373386..374258 Helicobacter pylori 83 12365167 YP_005784952.1 CDS pseH NC_017375.1 374255 374797 D COG: COG1670; Pfam: PF00583; InterPro: IPR016181; pseudaminic acid biosynthesis N-acetyl transferase 374255..374797 Helicobacter pylori 83 12365168 YP_005784953.1 CDS lpxK NC_017375.1 374730 375668 R COG: COG1663; Pfam: PF02606; InterPro: IPR003758; tetraacyldisaccharide 4'-kinase complement(374730..375668) Helicobacter pylori 83 12365169 YP_005784954.1 CDS nadE NC_017375.1 375665 376447 R COG: COG0171; Pfam: PF02540; InterPro: IPR003694; NAD+ synthetase complement(375665..376447) Helicobacter pylori 83 12365170 YP_005784955.1 CDS ilvC NC_017375.1 376696 377688 D COG: COG0059; Pfam: PF07991,PF01450; InterPro: IPR013023; ketol-acid reductoisomerase 376696..377688 Helicobacter pylori 83 12365172 YP_005784956.1 CDS minD NC_017375.1 377707 378513 D COG: COG2894; Pfam: PF01656; InterPro: IPR010223; septum site-determining protein MinD 377707..378513 Helicobacter pylori 83 12365173 YP_005784957.1 CDS minE NC_017375.1 378510 378743 D COG: COG0851; Pfam: PF03776; InterPro: IPR005527; cell division topological specificity factor MinE 378510..378743 Helicobacter pylori 83 12365174 YP_005784958.1 CDS dprA NC_017375.1 378755 379555 D COG: COG0758; Pfam: PF02481; InterPro: IPR003488; DNA protecting protein DprA 378755..379555 Helicobacter pylori 83 12365175 YP_005784959.1 CDS HMPREF0462_0392 NC_017375.1 379552 379956 D COG: COG0816; Pfam: PF03652; InterPro: IPR005227; Holliday junction resolvase family protein 379552..379956 Helicobacter pylori 83 12365176 YP_005784960.1 CDS hcpB NC_017375.1 380087 380560 D COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 380087..380560 Helicobacter pylori 83 12365177 YP_005784961.1 CDS HMPREF0462_0394 NC_017375.1 380748 381086 D hypothetical protein 380748..381086 Helicobacter pylori 83 12365178 YP_005784962.1 CDS HMPREF0462_0395 NC_017375.1 381070 381630 D hypothetical protein 381070..381630 Helicobacter pylori 83 12365179 YP_005784963.1 CDS HMPREF0462_0396 NC_017375.1 381641 382141 D Pfam: PF00959; InterPro: IPR002196; lysozyme family protein 381641..382141 Helicobacter pylori 83 12365180 YP_005784964.1 CDS HMPREF0462_0397 NC_017375.1 382161 382322 D hypothetical protein 382161..382322 Helicobacter pylori 83 12365181 YP_005784965.1 CDS HMPREF0462_0398 NC_017375.1 382380 382574 D beta-lactamase HcpA 382380..382574 Helicobacter pylori 83 12365182 YP_005784966.1 CDS HMPREF0462_0399 NC_017375.1 382652 383038 D Pfam: PF06961; InterPro: IPR010718; hypothetical protein 382652..383038 Helicobacter pylori 83 12365183 YP_005784967.1 CDS HMPREF0462_0400 NC_017375.1 383347 383823 D hypothetical protein 383347..383823 Helicobacter pylori 83 12365184 YP_005784968.1 CDS HMPREF0462_0401 NC_017375.1 383813 384937 D hypothetical protein 383813..384937 Helicobacter pylori 83 12365185 YP_005784969.1 CDS HMPREF0462_0402 NC_017375.1 384982 385863 R COG: COG0564; Pfam: PF00849; InterPro: IPR006145; pseudouridine synthase D complement(384982..385863) Helicobacter pylori 83 12365186 YP_005784970.1 CDS recJ NC_017375.1 385863 387413 R COG: COG0608; Pfam: PF01368,PF02272; InterPro: IPR004610; single-stranded-DNA-specific exonuclease RecJ complement(385863..387413) Helicobacter pylori 83 12365187 YP_005784971.1 CDS pyrG NC_017375.1 387423 389039 R COG: COG0504; Pfam: PF06418,PF00117; InterPro: IPR004468; CTP synthase complement(387423..389039) Helicobacter pylori 83 12365188 YP_005784972.1 CDS HMPREF0462_0405 NC_017375.1 389026 389190 D hypothetical protein 389026..389190 Helicobacter pylori 83 12365189 YP_005784973.1 CDS HMPREF0462_0406 NC_017375.1 389307 389969 D hypothetical protein 389307..389969 Helicobacter pylori 83 12365190 YP_005784974.1 CDS fliF NC_017375.1 390013 391716 D COG: COG1766; Pfam: PF01514,PF08345; InterPro: IPR000067; flagellar M-ring protein FliF 390013..391716 Helicobacter pylori 83 12365191 YP_005784975.1 CDS fliG NC_017375.1 391735 392766 D COG: COG1536; Pfam: PF01706; InterPro: IPR000090; flagellar motor switch protein FliG 391735..392766 Helicobacter pylori 83 12365192 YP_005784976.1 CDS fliH NC_017375.1 392753 393529 D COG: COG1317; Pfam: PF02108; flagellar export protein 392753..393529 Helicobacter pylori 83 12365193 YP_005784977.1 CDS dxs NC_017375.1 393526 395382 D COG: COG1154; Pfam: PF02779,PF02780; InterPro: IPR005477; 1-deoxy-D-xylulose-5-phosphate synthase 393526..395382 Helicobacter pylori 83 12365194 YP_005784978.1 CDS lepA NC_017375.1 395379 397187 D COG: COG0481; Pfam: PF00009,PF03144,PF00679,PF06421; InterPro: IPR006297; GTP-binding protein LepA 395379..397187 Helicobacter pylori 83 12365195 YP_005784979.1 CDS HMPREF0462_0412 NC_017375.1 397202 397960 D COG: COG5048; hypothetical protein 397202..397960 Helicobacter pylori 83 12365196 YP_005784980.1 CDS HMPREF0462_0413 NC_017375.1 398262 398519 D hypothetical protein 398262..398519 Helicobacter pylori 83 12365197 YP_005784981.1 CDS flgG NC_017375.1 398585 399394 R COG: COG4786; Pfam: PF00460; flagellar basal-body rod protein complement(398585..399394) Helicobacter pylori 83 12365198 YP_005784982.1 CDS kgtP NC_017375.1 399443 400723 R COG: COG0477; Pfam: PF07690; InterPro: IPR011701; alpha-ketoglutarate permease complement(399443..400723) Helicobacter pylori 83 12365199 YP_005784983.1 CDS ftsK NC_017375.1 400891 403464 R COG: COG1674; Pfam: PF01580; InterPro: IPR002543; DNA translocase FtsK complement(400891..403464) Helicobacter pylori 83 12365200 YP_005784984.1 CDS HMPREF0462_0417 NC_017375.1 403461 405797 R COG: COG3893; hypothetical protein complement(403461..405797) Helicobacter pylori 83 12365201 YP_005784985.1 CDS tkt NC_017375.1 405794 407719 R COG: COG0021; Pfam: PF00456,PF02779,PF02780; InterPro: IPR005478; transketolase complement(405794..407719) Helicobacter pylori 83 12365202 YP_005784986.1 CDS ribF NC_017375.1 407766 408608 R COG: COG0196; Pfam: PF06574,PF01687; InterPro: IPR002606; riboflavin biosynthesis protein RibF complement(407766..408608) Helicobacter pylori 83 12365203 YP_005784987.1 CDS rrmJ NC_017375.1 408574 409281 R COG: COG1189; Pfam: PF01479,PF01728; InterPro: IPR004538; ribosomal RNA large subunit methyltransferase J complement(408574..409281) Helicobacter pylori 83 12365204 YP_005784988.1 CDS HMPREF0462_0421 NC_017375.1 409281 409796 R hypothetical protein complement(409281..409796) Helicobacter pylori 83 12365205 YP_005784989.1 CDS pyrB NC_017375.1 409863 410786 D COG: COG0540; Pfam: PF02729,PF00185; InterPro: IPR002082; aspartate carbamoyltransferase 409863..410786 Helicobacter pylori 83 12365206 YP_005784990.1 CDS HMPREF0462_0423 NC_017375.1 411083 412522 D Pfam: PF02521; InterPro: IPR003678; outer membrane protein HofB 411083..412522 Helicobacter pylori 83 12365207 YP_005784991.1 CDS msbA NC_017375.1 412614 414269 D COG: COG1132; Pfam: PF00664,PF00005; InterPro: IPR001140; lipid A export ATP-binding/permease protein MsbA 412614..414269 Helicobacter pylori 83 12365208 YP_005784992.1 CDS HMPREF0462_0425 NC_017375.1 414263 414886 D hypothetical protein 414263..414886 Helicobacter pylori 83 12365209 YP_005784993.1 CDS HMPREF0462_0426 NC_017375.1 414890 415459 D COG: COG1787; Pfam: PF04471; InterPro: IPR007560; type II restriction endonuclease 414890..415459 Helicobacter pylori 83 12365210 YP_005784994.1 CDS HMPREF0462_0427 NC_017375.1 415570 416715 D COG: COG1106; Pfam: PF02463; hypothetical protein 415570..416715 Helicobacter pylori 83 12365211 YP_005784995.1 CDS HMPREF0462_0428 NC_017375.1 416708 417421 D hypothetical protein 416708..417421 Helicobacter pylori 83 12365212 YP_005784996.1 CDS nixA NC_017375.1 417478 418473 D COG: COG3376; Pfam: PF03824; InterPro: IPR011541; high-affinity nickel-transporter 417478..418473 Helicobacter pylori 83 12365213 YP_005784997.1 CDS HMPREF0462_0430 NC_017375.1 418477 418992 R hypothetical protein complement(418477..418992) Helicobacter pylori 83 12365214 YP_005784998.1 CDS HMPREF0462_0431 NC_017375.1 419126 420442 D hypothetical protein 419126..420442 Helicobacter pylori 83 12365215 YP_005784999.1 CDS HMPREF0462_0432 NC_017375.1 420614 420802 D hypothetical protein 420614..420802 Helicobacter pylori 83 12365216 YP_005785000.1 CDS HMPREF0462_0433 NC_017375.1 421187 421387 R Pfam: PF00403; InterPro: IPR006122; copper ion binding protein (copP) complement(421187..421387) Helicobacter pylori 83 12365217 YP_005785001.1 CDS copA NC_017375.1 421388 423586 R COG: COG2217; Pfam: PF00403,PF00122,PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase copper transporter complement(421388..423586) Helicobacter pylori 83 12365218 YP_005785002.1 CDS pssA NC_017375.1 423610 424323 R COG: COG1183; Pfam: PF01066; InterPro: IPR004533; CDP-diacylglycerol--serine O-phosphatidyltransferase complement(423610..424323) Helicobacter pylori 83 12365219 YP_005785003.1 CDS HMPREF0462_0436 NC_017375.1 424313 424567 R hypothetical protein complement(424313..424567) Helicobacter pylori 83 12365220 YP_005785004.1 CDS ftsH NC_017375.1 424570 426468 R COG: COG0465; Pfam: PF06480,PF00004,PF01434; InterPro: IPR005936; cell division protein FtsH complement(424570..426468) Helicobacter pylori 83 12365221 YP_005785005.1 CDS prmA NC_017375.1 426477 427466 R COG: COG2264; Pfam: PF06325; InterPro: IPR010456; 50S ribosomal protein L11 methyltransferase complement(426477..427466) Helicobacter pylori 83 12365222 YP_005785006.1 CDS cheY NC_017375.1 427467 427808 R COG: COG0784; Pfam: PF00072; InterPro: IPR001789; chemotaxis response regulator CheY complement(427467..427808) Helicobacter pylori 83 12365223 YP_005785007.1 CDS horD NC_017375.1 428204 428734 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein HorD 428204..428734 Helicobacter pylori 83 12365224 YP_005785008.1 CDS HMPREF0462_0441 NC_017375.1 428864 429271 R hypothetical protein complement(428864..429271) Helicobacter pylori 83 12365226 YP_005785009.1 CDS HMPREF0462_0442 NC_017375.1 429274 429516 R hypothetical protein complement(429274..429516) Helicobacter pylori 83 12365227 YP_005785010.1 CDS gidB NC_017375.1 429510 430046 R COG: COG0357; Pfam: PF02527; InterPro: IPR003682; 16S rRNA methyltransferase GidB complement(429510..430046) Helicobacter pylori 83 12365228 YP_005785011.1 CDS queA NC_017375.1 430043 431080 R COG: COG0809; Pfam: PF02547; InterPro: IPR003699; S-adenosylmethionine--tRNA ribosyltransferase-isomerase complement(430043..431080) Helicobacter pylori 83 12365229 YP_005785012.1 CDS tatC NC_017375.1 431081 431842 R COG: COG0805; Pfam: PF00902; InterPro: IPR002033; twin arginine-targeting protein translocase TatC complement(431081..431842) Helicobacter pylori 83 12365230 YP_005785013.1 CDS HMPREF0462_0446 NC_017375.1 431835 432311 R Pfam: PF02416; InterPro: IPR003998; sec-independent protein translocase TatB-like protein complement(431835..432311) Helicobacter pylori 83 12365231 YP_005785014.1 CDS ruvB NC_017375.1 432379 433389 R COG: COG2255; Pfam: PF05496,PF00004,PF05491; InterPro: IPR004605; crossover junction ATP-dependent DNA helicase RuvB complement(432379..433389) Helicobacter pylori 83 12365232 YP_005785015.1 CDS panB NC_017375.1 433390 434202 R COG: COG0413; Pfam: PF02548; InterPro: IPR003700; 3-methyl-2-oxobutanoate hydroxymethyltransferase complement(433390..434202) Helicobacter pylori 83 12365233 YP_005785016.1 CDS HMPREF0462_0449 NC_017375.1 434351 435073 D Pfam: PF01856; outer membrane protein 434351..435073 Helicobacter pylori 83 12365234 YP_005785017.1 CDS HMPREF0462_0450 NC_017375.1 435063 435917 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 435063..435917 Helicobacter pylori 83 12365235 YP_005785018.1 CDS HMPREF0462_0451 NC_017375.1 435926 436864 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 435926..436864 Helicobacter pylori 83 12365236 YP_005785019.1 CDS HMPREF0462_0452 NC_017375.1 436874 438196 D COG: COG0739; hypothetical protein 436874..438196 Helicobacter pylori 83 12365237 YP_005785020.1 CDS minC NC_017375.1 438199 438786 D Pfam: PF03775; InterPro: IPR005526; septum site-determining protein MinC 438199..438786 Helicobacter pylori 83 12365238 YP_005785021.1 CDS lpxC NC_017375.1 438783 439670 D COG: COG0774; Pfam: PF03331; InterPro: IPR004463; bifunctional UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase/(3R)-hydroxymyristoyl-[acyl-carrier- protein] dehydratase 438783..439670 Helicobacter pylori 83 12365239 YP_005785022.1 CDS yeaZ NC_017375.1 439692 440165 D COG: COG1214; hypothetical protein 439692..440165 Helicobacter pylori 83 12365240 YP_005785023.1 CDS thrB NC_017375.1 440220 441101 D COG: COG0083; Pfam: PF00288; InterPro: IPR000870; homoserine kinase 440220..441101 Helicobacter pylori 83 12365241 YP_005785024.1 CDS HMPREF0462_0457 NC_017375.1 441073 441342 D COG: COG2740; Pfam: PF04296; InterPro: IPR007393; hypothetical protein 441073..441342 Helicobacter pylori 83 12365242 YP_005785025.1 CDS infB NC_017375.1 441339 444173 D COG: COG0532; Pfam: PF04760,PF00009,PF03144; InterPro: IPR000178; translation initiation factor IF-2 441339..444173 Helicobacter pylori 83 12365243 YP_005785026.1 CDS rbfA NC_017375.1 444173 444508 D COG: COG0858; Pfam: PF02033; InterPro: IPR015946; ribosome-binding factor A 444173..444508 Helicobacter pylori 83 12365244 YP_005785027.1 CDS HMPREF0462_0460 NC_017375.1 444501 444941 D COG: COG0779; Pfam: PF02576; InterPro: IPR003728; hypothetical protein 444501..444941 Helicobacter pylori 83 12365245 YP_005785028.1 CDS acsA NC_017375.1 445049 447037 R COG: COG0365; Pfam: PF00501; InterPro: IPR011904; acetate-CoA ligase complement(445049..447037) Helicobacter pylori 83 12365246 YP_005785029.1 CDS HMPREF0462_0462 NC_017375.1 447234 448346 D COG: COG1408; Pfam: PF00149; InterPro: IPR004843; integral membrane protein 447234..448346 Helicobacter pylori 83 12365247 YP_005785030.1 CDS HMPREF0462_0463 NC_017375.1 448725 449396 D COG: COG0745; Pfam: PF00072,PF00486; InterPro: IPR001789; DNA-binding response regulator 448725..449396 Helicobacter pylori 83 12365248 YP_005785031.1 CDS HMPREF0462_0464 NC_017375.1 449920 450966 R COG: COG2404; Pfam: PF01368,PF02272; hypothetical protein complement(449920..450966) Helicobacter pylori 83 12365249 YP_005785032.1 CDS flhA NC_017375.1 450994 453195 R COG: COG1298; Pfam: PF00771; InterPro: IPR006301; flagellar biosynthesis protein FlhA complement(450994..453195) Helicobacter pylori 83 12365250 YP_005785033.1 CDS rpsO NC_017375.1 453334 453606 D COG: COG0184; Pfam: PF00312; InterPro: IPR009068; 30S ribosomal protein S15 453334..453606 Helicobacter pylori 83 12365251 YP_005785034.1 CDS HMPREF0462_0467 NC_017375.1 453637 454926 D Pfam: PF04932; InterPro: IPR007016; hypothetical protein 453637..454926 Helicobacter pylori 83 12365252 YP_005785035.1 CDS aroQ NC_017375.1 455049 455552 D COG: COG0757; Pfam: PF01220; InterPro: IPR001874; 3-dehydroquinate dehydratase 455049..455552 Helicobacter pylori 83 12365253 YP_005785036.1 CDS HMPREF0462_0469 NC_017375.1 455566 456639 D COG: COG0006; Pfam: PF00557; InterPro: IPR000994; proline peptidase 455566..456639 Helicobacter pylori 83 12365254 YP_005785037.1 CDS folK NC_017375.1 456639 457127 D COG: COG0801; Pfam: PF01288; InterPro: IPR000550; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 456639..457127 Helicobacter pylori 83 12365255 YP_005785038.1 CDS flhF NC_017375.1 457124 458500 D COG: COG1419; Pfam: PF02881,PF00448; InterPro: IPR000897; flagellar biosynthesis protein FlhF 457124..458500 Helicobacter pylori 83 12365256 YP_005785039.1 CDS ylxH NC_017375.1 458497 459381 D COG: COG0455; Pfam: PF01656; InterPro: IPR002586; ParA family ATPase 458497..459381 Helicobacter pylori 83 12365257 YP_005785040.1 CDS HMPREF0462_0473 NC_017375.1 459386 459700 D hypothetical protein 459386..459700 Helicobacter pylori 83 12365258 YP_005785041.1 CDS fliA NC_017375.1 459678 460454 D COG: COG1191; Pfam: PF04542,PF04545; InterPro: IPR014284; DNA-directed RNA polymerase sigma subunit FliA 459678..460454 Helicobacter pylori 83 12365259 YP_005785042.1 CDS fliM NC_017375.1 460447 461511 D COG: COG1868; Pfam: PF02154,PF01052; InterPro: IPR001689; flagellar motor switch protein FliM 460447..461511 Helicobacter pylori 83 12365260 YP_005785043.1 CDS fliY NC_017375.1 461515 462378 D Pfam: PF01052; InterPro: IPR012826; flagellar motor switch protein 461515..462378 Helicobacter pylori 83 12365261 YP_005785044.1 CDS HMPREF0462_0477 NC_017375.1 462407 462943 D COG: COG2731; Pfam: PF04074; InterPro: IPR004375; hypothetical protein 462407..462943 Helicobacter pylori 83 12365262 YP_005785045.1 CDS HMPREF0462_0478 NC_017375.1 462940 463437 D COG: COG4731; hypothetical protein 462940..463437 Helicobacter pylori 83 12365263 YP_005785046.1 CDS fur NC_017375.1 463457 463909 R COG: COG0735; Pfam: PF01475; InterPro: IPR002481; ferric uptake regulation protein complement(463457..463909) Helicobacter pylori 83 12365264 YP_005785047.1 CDS HMPREF0462_0480 NC_017375.1 464070 465245 R COG: COG2256; Pfam: PF00004; InterPro: IPR003593; ATPase complement(464070..465245) Helicobacter pylori 83 12365265 YP_005785048.1 CDS hspR NC_017375.1 465242 465613 R COG: COG0789; Pfam: PF00376; InterPro: IPR000551; MerR family transcriptional regulator complement(465242..465613) Helicobacter pylori 83 12365266 YP_005785049.1 CDS dnaJ NC_017375.1 465623 466489 R COG: COG2214; Pfam: PF00226,PF01556; InterPro: IPR015609; chaperone DnaJ complement(465623..466489) Helicobacter pylori 83 12365267 YP_005785050.1 CDS HMPREF0462_0483 NC_017375.1 466657 467913 D hypothetical protein 466657..467913 Helicobacter pylori 83 12365268 YP_005785051.1 CDS HMPREF0462_0484 NC_017375.1 467978 468709 R COG: COG0258; hypothetical protein complement(467978..468709) Helicobacter pylori 83 12365269 YP_005785052.1 CDS HMPREF0462_0485 NC_017375.1 468674 468793 D hypothetical protein 468674..468793 Helicobacter pylori 83 12365270 YP_005785053.1 CDS HMPREF0462_0486 NC_017375.1 468921 469130 R hypothetical protein complement(468921..469130) Helicobacter pylori 83 12365271 YP_005785054.1 CDS HMPREF0462_0487 NC_017375.1 469069 469965 R Pfam: PF00072,PF02954; InterPro: IPR001789; response regulator complement(469069..469965) Helicobacter pylori 83 12365272 YP_005785055.1 CDS ispDF NC_017375.1 470007 471227 R Pfam: PF01128,PF02542; InterPro: IPR001228; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase complement(470007..471227) Helicobacter pylori 83 12365273 YP_005785056.1 CDS htrA NC_017375.1 471249 472679 R COG: COG0265; Pfam: PF00089,PF00595; InterPro: IPR011782; serine protease HtrA complement(471249..472679) Helicobacter pylori 83 12365274 YP_005785057.1 CDS lysP NC_017375.1 472723 474165 R COG: COG0833; Pfam: PF00324; InterPro: IPR002293; APC family lysine-specific permease complement(472723..474165) Helicobacter pylori 83 12365275 YP_005785058.1 CDS pgsA NC_017375.1 474361 474900 R COG: COG0558; Pfam: PF01066; InterPro: IPR004570; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase complement(474361..474900) Helicobacter pylori 83 12365276 YP_005785059.1 CDS HMPREF0462_0492 NC_017375.1 474897 475505 R hypothetical protein complement(474897..475505) Helicobacter pylori 83 12365277 YP_005785060.1 CDS hdhA NC_017375.1 475515 476303 R COG: COG1028; Pfam: PF00106; InterPro: IPR002198; short chain dehydrogenase/reductase family oxidoreductase complement(475515..476303) Helicobacter pylori 83 12365278 YP_005785061.1 CDS dapA NC_017375.1 476300 477202 R COG: COG0329; Pfam: PF00701; InterPro: IPR002220; dihydrodipicolinate synthase complement(476300..477202) Helicobacter pylori 83 12365279 YP_005785062.1 CDS pqqE NC_017375.1 477217 478551 R COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237; coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E) complement(477217..478551) Helicobacter pylori 83 12365280 YP_005785063.1 CDS pyrD NC_017375.1 478548 479603 R COG: COG0167; Pfam: PF01180; InterPro: IPR005719; dihydroorotate oxidase complement(478548..479603) Helicobacter pylori 83 12365281 YP_005785064.1 CDS ppk NC_017375.1 479640 481667 R COG: COG0855; Pfam: PF02503; InterPro: IPR003414; polyphosphate kinase 1 complement(479640..481667) Helicobacter pylori 83 12365282 YP_005785065.1 CDS hsdS-1 NC_017375.1 481904 483163 R COG: COG0732; Pfam: PF01420; type I R-M system S protein complement(481904..483163) Helicobacter pylori 83 12365284 YP_005785066.1 CDS hsdM NC_017375.1 483323 484786 R COG: COG0286; Pfam: PF02384; InterPro: IPR003356; type I restriction enzyme M protein complement(483323..484786) Helicobacter pylori 83 12365285 YP_005785067.1 CDS hsdR NC_017375.1 484779 486173 R COG: COG0610; type I restriction enzyme R protein complement(484779..486173) Helicobacter pylori 83 12365286 YP_005785068.1 CDS hsdR2 NC_017375.1 486183 487916 R COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR006935; type I restriction enzyme R protein complement(486183..487916) Helicobacter pylori 83 12365287 YP_005785069.1 CDS HMPREF0462_0502 NC_017375.1 487964 489859 R COG: COG2604; Pfam: PF01973; InterPro: IPR002826; hypothetical protein complement(487964..489859) Helicobacter pylori 83 12365288 YP_005785070.1 CDS HMPREF0462_0503 NC_017375.1 489885 490652 R hypothetical protein complement(489885..490652) Helicobacter pylori 83 12365289 YP_005785071.1 CDS HMPREF0462_0504 NC_017375.1 490662 491009 R hypothetical protein complement(490662..491009) Helicobacter pylori 83 12365290 YP_005785072.1 CDS HMPREF0462_0505 NC_017375.1 490978 492465 R hypothetical protein complement(490978..492465) Helicobacter pylori 83 12365291 YP_005785073.1 CDS HMPREF0462_0506 NC_017375.1 492477 492977 R hypothetical protein complement(492477..492977) Helicobacter pylori 83 12365292 YP_005785074.1 CDS pepF NC_017375.1 492962 494698 R COG: COG1164; Pfam: PF08439,PF01432; InterPro: IPR011977; oligoendopeptidase F complement(492962..494698) Helicobacter pylori 83 12365293 YP_005785075.1 CDS kefB NC_017375.1 494796 496046 R COG: COG0475; Pfam: PF00999; InterPro: IPR006153; glutathione-regulated potassium-efflux system protein complement(494796..496046) Helicobacter pylori 83 12365294 YP_005785076.1 CDS HMPREF0462_0509 NC_017375.1 496365 496925 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(496365..496925) Helicobacter pylori 83 12365295 YP_005785077.1 CDS modA NC_017375.1 497149 497424 D molybdate ABC superfamily ATP binding cassette transporter, binding protein 497149..497424 Helicobacter pylori 83 12365296 YP_005785078.1 CDS modA2 NC_017375.1 497457 497648 D COG: COG0725; molybdate ABC superfamily ATP binding cassette transporter, binding protein 497457..497648 Helicobacter pylori 83 12365297 YP_005785079.1 CDS modB NC_017375.1 497912 498355 D COG: COG4149; Pfam: PF00528; InterPro: IPR000515; molybdate ABC superfamily ATP binding cassette transporter, permease protein 497912..498355 Helicobacter pylori 83 12365298 YP_005785080.1 CDS modB2 NC_017375.1 498355 498585 D COG: COG4149; molybdate ABC superfamily ATP binding cassette transporter, permease protein 498355..498585 Helicobacter pylori 83 12365299 YP_005785081.1 CDS modD NC_017375.1 498582 499379 D COG: COG1118; Pfam: PF00005; InterPro: IPR003593; molybdenum ABC superfamily ATP binding cassette transporter, ABC protein 498582..499379 Helicobacter pylori 83 12365300 YP_005785082.1 CDS gltX NC_017375.1 499465 500856 R COG: COG0008; Pfam: PF00749; InterPro: IPR004527; glutamate--tRNA ligase complement(499465..500856) Helicobacter pylori 83 12365301 YP_005785083.1 CDS HMPREF0462_0516 NC_017375.1 500974 501198 D outer membrane protein 500974..501198 Helicobacter pylori 83 12365302 YP_005785084.1 CDS HMPREF0462_0517 NC_017375.1 501201 502082 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 501201..502082 Helicobacter pylori 83 12365303 YP_005785085.1 CDS vspIM NC_017375.1 502093 503730 D COG: COG0827; adenine specific DNA methyltransferase 502093..503730 Helicobacter pylori 83 12365304 YP_005785086.1 CDS HMPREF0462_0519 NC_017375.1 503696 504544 D COG: COG0859; DD-heptosyltransferase 503696..504544 Helicobacter pylori 83 12365305 YP_005785087.1 CDS typA NC_017375.1 504590 506389 D COG: COG1217; Pfam: PF00009,PF03144,PF00679; InterPro: IPR006298; GTP-binding protein TypA/BipA 504590..506389 Helicobacter pylori 83 12365306 YP_005785088.1 CDS mfoKI NC_017375.1 506409 506774 D Pfam: PF02086; InterPro: IPR012327; adenine specific DNA methyltransferase 506409..506774 Helicobacter pylori 83 12365307 YP_005785089.1 CDS HMPREF0462_0522 NC_017375.1 506823 507335 D COG: COG0338; Pfam: PF02086; site-specific type II DNA methyltransferase 506823..507335 Helicobacter pylori 83 12365308 YP_005785090.1 CDS HMPREF0462_0523 NC_017375.1 507338 507946 D type II restriction endonuclease 507338..507946 Helicobacter pylori 83 12365309 YP_005785091.1 CDS HMPREF0462_0524 NC_017375.1 508182 509126 R COG: COG0753; InterPro: IPR011614; catalase like protein complement(508182..509126) Helicobacter pylori 83 12365310 YP_005785092.1 CDS hofC NC_017375.1 509408 510994 D Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 509408..510994 Helicobacter pylori 83 12365311 YP_005785093.1 CDS hofD NC_017375.1 511020 512462 D Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 511020..512462 Helicobacter pylori 83 12365312 YP_005785094.1 CDS HMPREF0462_0527 NC_017375.1 512765 513202 D hypothetical protein 512765..513202 Helicobacter pylori 83 12365313 YP_005785095.1 CDS HMPREF0462_0528 NC_017375.1 513195 513323 D hypothetical protein 513195..513323 Helicobacter pylori 83 12365314 YP_005785096.1 CDS HMPREF0462_0529 NC_017375.1 513388 513696 D hypothetical protein 513388..513696 Helicobacter pylori 83 12365315 YP_005785097.1 CDS HMPREF0462_0530 NC_017375.1 514109 514834 R COG: COG1432; hypothetical protein complement(514109..514834) Helicobacter pylori 83 12365316 YP_005785098.1 CDS ruvC NC_017375.1 514942 515448 D COG: COG0817; Pfam: PF02075; InterPro: IPR002176; crossover junction endoribonuclease subunit C 514942..515448 Helicobacter pylori 83 12365317 YP_005785099.1 CDS frpB NC_017375.1 515460 517835 R COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531; iron-regulated outer membrane protein complement(515460..517835) Helicobacter pylori 83 12365318 YP_005785100.1 CDS katA NC_017375.1 518157 519683 D COG: COG0753; Pfam: PF00199; InterPro: IPR011614; catalase 518157..519683 Helicobacter pylori 83 12365319 YP_005785101.1 CDS kapA NC_017375.1 519834 520709 D KapA protein 519834..520709 Helicobacter pylori 83 12365320 YP_005785102.1 CDS HMPREF0462_0535 NC_017375.1 520794 521009 D hypothetical protein 520794..521009 Helicobacter pylori 83 12365321 YP_005785103.1 CDS HMPREF0462_0536 NC_017375.1 521067 521396 R COG: COG2824; Pfam: PF08274,PF03831; InterPro: IPR004624; alkylphosphonate uptake protein complement(521067..521396) Helicobacter pylori 83 12365322 YP_005785104.1 CDS cdh NC_017375.1 521716 522450 D COG: COG2134; Pfam: PF02611; InterPro: IPR003763; CDP-diacylglycerol diphosphatase 521716..522450 Helicobacter pylori 83 12365323 YP_005785105.1 CDS flgE NC_017375.1 522663 524819 D COG: COG1749; Pfam: PF00460,PF07196,PF07559,PF06429; InterPro: IPR012835; flagellar hook protein FlgE 522663..524819 Helicobacter pylori 83 12365324 YP_005785106.1 CDS hypA NC_017375.1 524878 525231 D COG: COG0375; Pfam: PF01155; InterPro: IPR000688; hydrogenase nickel incorporation protein HypA 524878..525231 Helicobacter pylori 83 12365325 YP_005785107.1 CDS HMPREF0462_0540 NC_017375.1 525235 525696 D hypothetical protein 525235..525696 Helicobacter pylori 83 12365326 YP_005785108.1 CDS lpxB NC_017375.1 525696 526778 D COG: COG0763; Pfam: PF02684; InterPro: IPR003835; lipid-A-disaccharide synthase 525696..526778 Helicobacter pylori 83 12365327 YP_005785109.1 CDS greA NC_017375.1 526819 527313 D COG: COG0782; Pfam: PF03449,PF01272; InterPro: IPR001437; transcription elongation factor GreA 526819..527313 Helicobacter pylori 83 12365328 YP_005785110.1 CDS dut NC_017375.1 527303 527740 D COG: COG0756; Pfam: PF00692; InterPro: IPR008181; deoxyuridine 5'triphosphate nucleotidohydrolase 527303..527740 Helicobacter pylori 83 12365329 YP_005785111.1 CDS HMPREF0462_0544 NC_017375.1 527737 528393 D hypothetical protein 527737..528393 Helicobacter pylori 83 12365330 YP_005785112.1 CDS HMPREF0462_0545 NC_017375.1 528398 530044 D plasminogen-binding protein PgbB 528398..530044 Helicobacter pylori 83 12365331 YP_005785113.1 CDS coaX NC_017375.1 530049 530714 D COG: COG1521; Pfam: PF03309; InterPro: IPR004619; type III pantothenate kinase 530049..530714 Helicobacter pylori 83 12365332 YP_005785114.1 CDS HMPREF0462_0547 NC_017375.1 530705 531442 D COG: COG2836; hypothetical protein 530705..531442 Helicobacter pylori 83 12365333 YP_005785115.1 CDS HMPREF0462_0548 NC_017375.1 531429 531953 D COG: COG0241; InterPro: IPR004446; D,D-heptose 1,7-bisphosphate phosphatase 531429..531953 Helicobacter pylori 83 12365334 YP_005785116.1 CDS rfaD NC_017375.1 531962 532954 D COG: COG0451; Pfam: PF01370; InterPro: IPR011912; ADP-glyceromanno-heptose 6-epimerase 531962..532954 Helicobacter pylori 83 12365335 YP_005785117.1 CDS hldE NC_017375.1 532951 534336 D COG: COG2870; Pfam: PF00294,PF01467; InterPro: IPR011913; bifunctional protein hldE (D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferase) 532951..534336 Helicobacter pylori 83 12365336 YP_005785118.1 CDS gmhA NC_017375.1 534329 534907 D COG: COG0279; Pfam: PF01380; InterPro: IPR004515; phosphoheptose isomerase 534329..534907 Helicobacter pylori 83 12365337 YP_005785119.1 CDS HMPREF0462_0552 NC_017375.1 534917 535090 R hypothetical protein complement(534917..535090) Helicobacter pylori 83 12365338 YP_005785120.1 CDS guaC NC_017375.1 535074 536075 R COG: COG0516; Pfam: PF00478; InterPro: IPR001093; GMP reductase complement(535074..536075) Helicobacter pylori 83 12365339 YP_005785121.1 CDS HMPREF0462_0554 NC_017375.1 536301 537902 D COG: COG0488; Pfam: PF00005; InterPro: IPR003439; ABC superfamily ATP binding cassette transporter, ABC protein 536301..537902 Helicobacter pylori 83 12365340 YP_005785122.1 CDS HMPREF0462_0555 NC_017375.1 537899 538498 D COG: COG2958; Pfam: PF04373; InterPro: IPR007468; hypothetical protein 537899..538498 Helicobacter pylori 83 12365341 YP_005785123.1 CDS HMPREF0462_0556 NC_017375.1 538488 538826 D Pfam: PF04373; InterPro: IPR007468; hypothetical protein 538488..538826 Helicobacter pylori 83 12365342 YP_005785124.1 CDS HMPREF0462_0557 NC_017375.1 538843 539529 R COG: COG0671; Pfam: PF01569; InterPro: IPR016118; phosphatidic acid phosphatase complement(538843..539529) Helicobacter pylori 83 12365343 YP_005785125.1 CDS hsdM2 NC_017375.1 539546 541297 D COG: COG0286; Pfam: PF02384; InterPro: IPR004546; type I restriction-modification system 539546..541297 Helicobacter pylori 83 12365344 YP_005785126.1 CDS hsdS NC_017375.1 541290 541799 D COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I restrictionenzyme 541290..541799 Helicobacter pylori 83 12365345 YP_005785127.1 CDS hsdS2 NC_017375.1 541835 542545 D COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I R-M system S protein 541835..542545 Helicobacter pylori 83 12365346 YP_005785128.1 CDS hsdR3 NC_017375.1 542941 545565 D COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR004473; type I site-specific deoxyribonuclease 542941..545565 Helicobacter pylori 83 12365347 YP_005785129.1 CDS thiM NC_017375.1 545658 546437 D COG: COG2145; Pfam: PF02110; InterPro: IPR000417; hydroxyethylthiazole kinase 545658..546437 Helicobacter pylori 83 12365348 YP_005785130.1 CDS thiD NC_017375.1 546434 547243 D COG: COG0351; Pfam: PF08543; InterPro: IPR004399; phosphomethylpyrimidine kinase 546434..547243 Helicobacter pylori 83 12365349 YP_005785131.1 CDS thiE NC_017375.1 547224 547895 D COG: COG0352; Pfam: PF02581; InterPro: IPR013785; thiamine-phosphate diphosphorylase 547224..547895 Helicobacter pylori 83 12365350 YP_005785132.1 CDS HMPREF0462_0565 NC_017375.1 547920 548657 R hypothetical protein complement(547920..548657) Helicobacter pylori 83 12365351 YP_005785133.1 CDS coaBC NC_017375.1 548657 549934 R COG: COG0452; Pfam: PF02441,PF04127; InterPro: IPR005252; coenzyme A biosynthesis bifunctional protein CoaBC complement(548657..549934) Helicobacter pylori 83 12365352 YP_005785134.1 CDS pseB NC_017375.1 549931 550914 R COG: COG1086; Pfam: PF02719; InterPro: IPR003869; UDP-N-acetylglucosamine 4,6-dehydratase complement(549931..550914) Helicobacter pylori 83 12365353 YP_005785135.1 CDS ompP NC_017375.1 550929 552692 R COG: COG2067; Pfam: PF03349; InterPro: IPR005017; outer membrane protein P1 complement(550929..552692) Helicobacter pylori 83 12365354 YP_005785136.1 CDS HMPREF0462_0569 NC_017375.1 552689 553270 R hypothetical protein complement(552689..553270) Helicobacter pylori 83 12365355 YP_005785137.1 CDS HMPREF0462_0570 NC_017375.1 553326 553931 R COG: COG3018; Pfam: PF04164; InterPro: IPR007293; hypothetical protein complement(553326..553931) Helicobacter pylori 83 12365356 YP_005785138.1 CDS hup NC_017375.1 554605 554889 R COG: COG0776; Pfam: PF00216; InterPro: IPR000119; DNA-binding protein HU complement(554605..554889) Helicobacter pylori 83 12365358 YP_005785139.1 CDS engA NC_017375.1 555032 556414 R COG: COG1160; Pfam: PF01926; InterPro: IPR005225; ribosome-associated GTPase EngA complement(555032..556414) Helicobacter pylori 83 12365359 YP_005785140.1 CDS HMPREF0462_0573 NC_017375.1 556491 557378 D hypothetical protein 556491..557378 Helicobacter pylori 83 12365360 YP_005785141.1 CDS speE NC_017375.1 557467 558255 D COG: COG0421; Pfam: PF01564; InterPro: IPR001045; spermidine synthase 557467..558255 Helicobacter pylori 83 12365361 YP_005785142.1 CDS coaE NC_017375.1 558257 558847 D COG: COG0237; Pfam: PF01121; InterPro: IPR001977; dephospho-CoA kinase 558257..558847 Helicobacter pylori 83 12365362 YP_005785143.1 CDS gatA NC_017375.1 558906 560267 D COG: COG0154; Pfam: PF01425; InterPro: IPR004412; glutamyl-tRNA(Gln) amidotransferase subunit A 558906..560267 Helicobacter pylori 83 12365363 YP_005785144.1 CDS guaB NC_017375.1 560277 561722 D COG: COG0516; Pfam: PF00478,PF00571; InterPro: IPR013785; inosine-5'-monophosphate dehydrogenase 560277..561722 Helicobacter pylori 83 12365364 YP_005785145.1 CDS atpB NC_017375.1 561832 562512 D COG: COG0356; Pfam: PF00119; InterPro: IPR000568; ATP synthase F0 subunit A 561832..562512 Helicobacter pylori 83 12365365 YP_005785146.1 CDS HMPREF0462_0579 NC_017375.1 562828 563076 D COG: COG0724; Pfam: PF00076; InterPro: IPR015465; peptidyl-prolyl cis-trans isomerase 562828..563076 Helicobacter pylori 83 12365366 YP_005785147.1 CDS lex2B NC_017375.1 563282 564103 R COG: COG3306; Pfam: PF01755; InterPro: IPR002654; lipooligosaccharide 5G8 epitope biosynthesis-associated protein complement(563282..564103) Helicobacter pylori 83 12365367 YP_005785148.1 CDS trxB NC_017375.1 564270 565205 R COG: COG0492; Pfam: PF07992,PF00070; InterPro: IPR005982; thioredoxin-disulfide reductase complement(564270..565205) Helicobacter pylori 83 12365368 YP_005785149.1 CDS trxA NC_017375.1 565211 565531 R COG: COG0526; Pfam: PF00085; InterPro: IPR012335; thioredoxin complement(565211..565531) Helicobacter pylori 83 12365369 YP_005785150.1 CDS HMPREF0462_0583 NC_017375.1 565620 565964 R COG: COG0792; Pfam: PF02021; InterPro: IPR003509; endonuclease complement(565620..565964) Helicobacter pylori 83 12365370 YP_005785151.1 CDS hom NC_017375.1 565965 567230 R COG: COG0460; Pfam: PF03447,PF00742,PF01842; InterPro: IPR001342; homoserine dehydrogenase complement(565965..567230) Helicobacter pylori 83 12365371 YP_005785152.1 CDS uvrC NC_017375.1 567241 569025 R COG: COG0322; Pfam: PF01541,PF02151,PF08459; InterPro: IPR004791; excision endonuclease subunit UvrC complement(567241..569025) Helicobacter pylori 83 12365372 YP_005785153.1 CDS HMPREF0462_0586 NC_017375.1 569026 569487 R hypothetical protein complement(569026..569487) Helicobacter pylori 83 12365373 YP_005785154.1 CDS HMPREF0462_0587 NC_017375.1 569479 569658 D hypothetical protein 569479..569658 Helicobacter pylori 83 12365374 YP_005785155.1 CDS proV NC_017375.1 569670 570311 R COG: COG1125; Pfam: PF00005; InterPro: IPR003593; osmoprotection protein complement(569670..570311) Helicobacter pylori 83 12365375 YP_005785156.1 CDS proWX NC_017375.1 570313 571974 R COG: COG1732; Pfam: PF00528,PF04069; InterPro: IPR007210; osmoprotection protein complement(570313..571974) Helicobacter pylori 83 12365376 YP_005785157.1 CDS HMPREF0462_0590 NC_017375.1 572154 572591 R hypothetical protein complement(572154..572591) Helicobacter pylori 83 12365377 YP_005785158.1 CDS motB NC_017375.1 572595 573362 R COG: COG1360; Pfam: PF00691; InterPro: IPR006665; flagellar motor protein MotB complement(572595..573362) Helicobacter pylori 83 12365378 YP_005785159.1 CDS motA NC_017375.1 573365 574138 R COG: COG1291; Pfam: PF01618; InterPro: IPR002898; flagellar motor protein MotA complement(573365..574138) Helicobacter pylori 83 12365379 YP_005785160.1 CDS thiF NC_017375.1 574154 574921 R COG: COG0476; Pfam: PF00899,PF05237; InterPro: IPR016040; ThiF family protein complement(574154..574921) Helicobacter pylori 83 12365380 YP_005785161.1 CDS HMPREF0462_0594 NC_017375.1 574922 575539 R COG: COG0491; Pfam: PF00753; InterPro: IPR001279; metallo-beta-lactamase complement(574922..575539) Helicobacter pylori 83 12365381 YP_005785162.1 CDS HMPREF0462_0595 NC_017375.1 575664 576671 D COG: COG1565; hypothetical protein 575664..576671 Helicobacter pylori 83 12365382 YP_005785163.1 CDS HMPREF0462_0596 NC_017375.1 577111 577437 D hypothetical protein 577111..577437 Helicobacter pylori 83 12365383 YP_005785164.1 CDS HMPREF0462_0597 NC_017375.1 577416 578018 D COG: COG0742; Pfam: PF03602; InterPro: IPR004398; RsmD family RNA methyltransferase 577416..578018 Helicobacter pylori 83 12365384 YP_005785165.1 CDS fliL NC_017375.1 578027 578578 D COG: COG1580; Pfam: PF03748; InterPro: IPR005503; flagellar basal body-associated protein FliL 578027..578578 Helicobacter pylori 83 12365385 YP_005785166.1 CDS acpS NC_017375.1 578585 578941 D COG: COG0736; Pfam: PF01648; InterPro: IPR002582; holo-[acyl-carrier-protein] synthase 578585..578941 Helicobacter pylori 83 12365386 YP_005785167.1 CDS fecA NC_017375.1 579166 581541 D COG: COG4772; Pfam: PF07715,PF00593; InterPro: IPR000531; iron(III) dicitrate transporter 579166..581541 Helicobacter pylori 83 12365387 YP_005785168.1 CDS HMPREF0462_0601 NC_017375.1 581552 582166 R COG: COG1451; Pfam: PF01863; InterPro: IPR002725; metalloprotease complement(581552..582166) Helicobacter pylori 83 12365388 YP_005785169.1 CDS lex2B2 NC_017375.1 582248 583090 D COG: COG3306; Pfam: PF01755; InterPro: IPR002654; lipooligosaccharide 5G8 epitope biosynthesis-associated protein 582248..583090 Helicobacter pylori 83 12365389 YP_005785170.1 CDS HMPREF0462_0603 NC_017375.1 583164 584006 R type 11 methyltransferase complement(583164..584006) Helicobacter pylori 83 12365390 YP_005785171.1 CDS HMPREF0462_0604 NC_017375.1 584081 584221 R hypothetical protein complement(584081..584221) Helicobacter pylori 83 12365391 YP_005785172.1 CDS ribB NC_017375.1 584374 585408 D COG: COG0108; Pfam: PF00926; InterPro: IPR000422; 3,4-dihydroxy-2-butanone 4-phosphate synthase 584374..585408 Helicobacter pylori 83 12365392 YP_005785173.1 CDS HMPREF0462_0606 NC_017375.1 585495 586334 D hypothetical protein 585495..586334 Helicobacter pylori 83 12365393 YP_005785174.1 CDS ribA NC_017375.1 586383 587030 D COG: COG0807; Pfam: PF00925; InterPro: IPR000926; GTP cyclohydrolase II 586383..587030 Helicobacter pylori 83 12365394 YP_005785175.1 CDS moaD NC_017375.1 587101 587325 D COG: COG1977; Pfam: PF02597; InterPro: IPR003749; molybdenum cofactor biosynthesis protein small subunit 587101..587325 Helicobacter pylori 83 12365395 YP_005785176.1 CDS moaE NC_017375.1 587326 587763 D COG: COG0314; Pfam: PF02391; InterPro: IPR003448; molybdenum cofactorbiosynthesis protein large subunit 587326..587763 Helicobacter pylori 83 12365396 YP_005785177.1 CDS pcd NC_017375.1 587776 588306 D COG: COG0521; Pfam: PF00994; InterPro: IPR001453; 4a-hydroxytetrahydrobiopterin dehydratase 587776..588306 Helicobacter pylori 83 12365397 YP_005785178.1 CDS moaC NC_017375.1 588315 588791 D COG: COG0315; Pfam: PF01967; InterPro: IPR002820; molybdenum cofactor biosynthesis protein C 588315..588791 Helicobacter pylori 83 12365398 YP_005785179.1 CDS HMPREF0462_0612 NC_017375.1 588910 589692 D Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin 588910..589692 Helicobacter pylori 83 12365399 YP_005785180.1 CDS HMPREF0462_0613 NC_017375.1 589721 590557 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 589721..590557 Helicobacter pylori 83 12365400 YP_005785181.1 CDS tig NC_017375.1 590669 592024 D COG: COG0544; Pfam: PF05697,PF00254,PF05698; InterPro: IPR005215; trigger factor 590669..592024 Helicobacter pylori 83 12365401 YP_005785182.1 CDS clpP NC_017375.1 592045 592632 D COG: COG0740; Pfam: PF00574; InterPro: IPR001907; ATP-dependent Clp protease proteolytic subunit 592045..592632 Helicobacter pylori 83 12365402 YP_005785183.1 CDS def NC_017375.1 592637 593161 D COG: COG0242; Pfam: PF01327; InterPro: IPR000181; peptide deformylase 592637..593161 Helicobacter pylori 83 12365403 YP_005785184.1 CDS HMPREF0462_0617 NC_017375.1 593167 594687 D COG: COG0606; Pfam: PF01078; InterPro: IPR004482; Mg chelatase-like protein 593167..594687 Helicobacter pylori 83 12365404 YP_005785185.1 CDS cadA NC_017375.1 594712 596772 D COG: COG2217; Pfam: PF00122,PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase cadmium transporter 594712..596772 Helicobacter pylori 83 12365405 YP_005785186.1 CDS HMPREF0462_0619 NC_017375.1 596808 597413 D COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I restriction modification DNA specificity family protein 596808..597413 Helicobacter pylori 83 12365406 YP_005785187.1 CDS hofF NC_017375.1 597709 599208 R Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein complement(597709..599208) Helicobacter pylori 83 12365407 YP_005785188.1 CDS HMPREF0462_0621 NC_017375.1 599487 600719 R COG: COG4591; Pfam: PF02687; InterPro: IPR003838; ABC superfamily ATP binding cassette transporter, ABC protein complement(599487..600719) Helicobacter pylori 83 12365408 YP_005785189.1 CDS secA NC_017375.1 600709 603306 R COG: COG0653; Pfam: PF07517,PF01043,PF00271,PF07516,PF02810; InterPro: IPR000185; preprotein translocase subunit SecA complement(600709..603306) Helicobacter pylori 83 12365409 YP_005785190.1 CDS lolA NC_017375.1 603454 604008 D COG: COG2834; Pfam: PF03548; InterPro: IPR004564; outer-membrane lipoprotein carrier protein 603454..604008 Helicobacter pylori 83 12365410 YP_005785191.1 CDS HMPREF0462_0624 NC_017375.1 604493 605020 D hypothetical protein 604493..605020 Helicobacter pylori 83 12365412 YP_005785192.1 CDS hofE2 NC_017375.1 605027 606394 R Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein complement(605027..606394) Helicobacter pylori 83 12365413 YP_005785193.1 CDS HMPREF0462_0626 NC_017375.1 606496 607785 R COG: COG5659; hypothetical protein complement(606496..607785) Helicobacter pylori 83 12365414 YP_005785194.1 CDS HMPREF0462_0627 NC_017375.1 608049 608321 R hypothetical protein complement(608049..608321) Helicobacter pylori 83 12365415 YP_005785195.1 CDS acnB NC_017375.1 608397 610958 R COG: COG1049; Pfam: PF06434,PF00330; InterPro: IPR004406; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase complement(608397..610958) Helicobacter pylori 83 12365416 YP_005785196.1 CDS HMPREF0462_0629 NC_017375.1 611095 611778 D COG: COG1427; Pfam: PF02621; InterPro: IPR003773; hypothetical protein 611095..611778 Helicobacter pylori 83 12365417 YP_005785197.1 CDS pyrH NC_017375.1 611887 612609 D COG: COG0528; Pfam: PF00696; InterPro: IPR001048; UMP kinase 611887..612609 Helicobacter pylori 83 12365418 YP_005785198.1 CDS rpoZ NC_017375.1 612652 612876 D COG: COG1758; Pfam: PF01192; InterPro: IPR006110; DNA-directed RNA polymerase subunit omega 612652..612876 Helicobacter pylori 83 12365419 YP_005785199.1 CDS spoT NC_017375.1 612863 615190 D COG: COG0317; Pfam: PF01966,PF04607,PF02824; InterPro: IPR004811; penta-phosphate guanosine-3'-pyrophosphohydrolase 612863..615190 Helicobacter pylori 83 12365420 YP_005785200.1 CDS tyrS NC_017375.1 615214 616422 D COG: COG0162; Pfam: PF00579,PF01479; InterPro: IPR002307; tyrosine--tRNA ligase 615214..616422 Helicobacter pylori 83 12365421 YP_005785201.1 CDS HMPREF0462_0634 NC_017375.1 616433 617524 D COG: COG2070; Pfam: PF03060; InterPro: IPR004136; 2-nitropropane dioxygenase 616433..617524 Helicobacter pylori 83 12365422 YP_005785202.1 CDS amiD NC_017375.1 617531 618943 D COG: COG0860; Pfam: PF01520; InterPro: IPR002508; N-acetylmuramoyl-L-alanine amidase 617531..618943 Helicobacter pylori 83 12365423 YP_005785203.1 CDS HMPREF0462_0636 NC_017375.1 618951 619688 D hypothetical protein 618951..619688 Helicobacter pylori 83 12365424 YP_005785204.1 CDS flhB NC_017375.1 619775 620851 R COG: COG1377; Pfam: PF01312; InterPro: IPR006136; flagellar biosynthetic protein FlhB complement(619775..620851) Helicobacter pylori 83 12365425 YP_005785205.1 CDS mobA NC_017375.1 620844 621449 R COG: COG0746; molybdopterin-guanine dinucleotide biosynthesis protein MobA complement(620844..621449) Helicobacter pylori 83 12365426 YP_005785206.1 CDS HMPREF0462_0639 NC_017375.1 621619 621759 D molybdenum cofactor biosynthesis protein A 621619..621759 Helicobacter pylori 83 12365427 YP_005785207.1 CDS moaA NC_017375.1 621756 622376 D COG: COG2896; Pfam: PF04055,PF06463; InterPro: IPR010505; molybdenum cofactor biosynthesis protein A 621756..622376 Helicobacter pylori 83 12365428 YP_005785208.1 CDS HMPREF0462_0641 NC_017375.1 622764 622892 D hypothetical protein 622764..622892 Helicobacter pylori 83 12365429 YP_005785209.1 CDS HMPREF0462_0642 NC_017375.1 622879 623166 D hypothetical protein 622879..623166 Helicobacter pylori 83 12365430 YP_005785210.1 CDS HMPREF0462_0643 NC_017375.1 623247 623429 D hypothetical protein 623247..623429 Helicobacter pylori 83 12365431 YP_005785211.1 CDS HMPREF0462_0644 NC_017375.1 623588 624259 D hypothetical protein 623588..624259 Helicobacter pylori 83 12365432 YP_005785212.1 CDS HMPREF0462_0645 NC_017375.1 624393 624707 D Pfam: PF03692; InterPro: IPR005358; hypothetical protein 624393..624707 Helicobacter pylori 83 12365433 YP_005785213.1 CDS ftsY NC_017375.1 624716 625609 R COG: COG0552; Pfam: PF00448; InterPro: IPR004390; cell division protein FtsY complement(624716..625609) Helicobacter pylori 83 12365434 YP_005785214.1 CDS HMPREF0462_0647 NC_017375.1 625616 626173 R hypothetical protein complement(625616..626173) Helicobacter pylori 83 12365435 YP_005785215.1 CDS HMPREF0462_0648 NC_017375.1 626298 626945 D COG: COG0212; Pfam: PF01812; InterPro: IPR002698; hypothetical protein 626298..626945 Helicobacter pylori 83 12365436 YP_005785216.1 CDS ymdA NC_017375.1 626845 628437 D COG: COG1418; Pfam: PF00013,PF01966; InterPro: IPR003607; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 626845..628437 Helicobacter pylori 83 12365437 YP_005785217.1 CDS HMPREF0462_0650 NC_017375.1 628438 629691 R COG: COG0534; Pfam: PF01554; InterPro: IPR002528; multidrug efflux protein complement(628438..629691) Helicobacter pylori 83 12365438 YP_005785218.1 CDS HMPREF0462_0651 NC_017375.1 629754 631067 R COG: COG2056; Pfam: PF03553; InterPro: IPR004770; Na+/H+ antiporter family protein complement(629754..631067) Helicobacter pylori 83 12365439 YP_005785219.1 CDS pabB2 NC_017375.1 631194 632072 R COG: COG0388; Pfam: PF00795; InterPro: IPR003010; para-aminobenzoate synthase complement(631194..632072) Helicobacter pylori 83 12365440 YP_005785220.1 CDS HMPREF0462_0653 NC_017375.1 632076 632237 R hypothetical protein complement(632076..632237) Helicobacter pylori 83 12365441 YP_005785221.1 CDS moeB NC_017375.1 632251 632910 R COG: COG1179; Pfam: PF00899; InterPro: IPR016040; ThiF family protein complement(632251..632910) Helicobacter pylori 83 12365442 YP_005785222.1 CDS HMPREF0462_0655 NC_017375.1 632963 633187 R hypothetical protein complement(632963..633187) Helicobacter pylori 83 12365443 YP_005785223.1 CDS fliS NC_017375.1 633189 633569 R COG: COG1516; Pfam: PF02561; InterPro: IPR003713; flagellar protein FliS complement(633189..633569) Helicobacter pylori 83 12365444 YP_005785224.1 CDS fliD NC_017375.1 633617 635674 R COG: COG1345; Pfam: PF02465,PF07196,PF07195; InterPro: IPR010809; flagellar hook-associated protein 2 complement(633617..635674) Helicobacter pylori 83 12365445 YP_005785225.1 CDS flaG NC_017375.1 635691 636062 R COG: COG1334; Pfam: PF03646; InterPro: IPR005186; polar flagellin complement(635691..636062) Helicobacter pylori 83 12365446 YP_005785226.1 CDS HMPREF0462_0659 NC_017375.1 636146 637348 R COG: COG0739; Pfam: PF01551; InterPro: IPR016047; hypothetical protein complement(636146..637348) Helicobacter pylori 83 12365447 YP_005785227.1 CDS ftsX NC_017375.1 637341 638159 R cell division protein FtsX complement(637341..638159) Helicobacter pylori 83 12365448 YP_005785228.1 CDS lolD NC_017375.1 638134 638805 R COG: COG1136; Pfam: PF00005; InterPro: IPR003593; lipoprotein ABC superfamily ATP binding cassette transporter, ABC protein complement(638134..638805) Helicobacter pylori 83 12365449 YP_005785229.1 CDS trmB NC_017375.1 638802 639983 R COG: COG0220; Pfam: PF02390; InterPro: IPR003358; tRNA (guanine-N(7)-)-methyltransferase complement(638802..639983) Helicobacter pylori 83 12365450 YP_005785230.1 CDS HMPREF0462_0663 NC_017375.1 639994 641241 R COG: COG3401; Pfam: PF00041; hypothetical protein complement(639994..641241) Helicobacter pylori 83 12365451 YP_005785231.1 CDS HMPREF0462_0664 NC_017375.1 641204 642187 R COG: COG0564; Pfam: PF01479,PF00849; InterPro: IPR006225; RluA family ribosomal large subunit pseudouridine synthase complement(641204..642187) Helicobacter pylori 83 12365452 YP_005785232.1 CDS HMPREF0462_0665 NC_017375.1 642349 642498 D hypothetical protein 642349..642498 Helicobacter pylori 83 12365453 YP_005785233.1 CDS HMPREF0462_0666 NC_017375.1 642491 643066 D hypothetical protein 642491..643066 Helicobacter pylori 83 12365454 YP_005785234.1 CDS HMPREF0462_0667 NC_017375.1 643047 643538 D hypothetical protein 643047..643538 Helicobacter pylori 83 12365455 YP_005785235.1 CDS prsA NC_017375.1 644776 645732 R COG: COG0462; Pfam: PF00156; InterPro: IPR005946; ribose-phosphate pyrophosphokinase complement(644776..645732) Helicobacter pylori 83 12365457 YP_005785236.1 CDS HMPREF0462_0669 NC_017375.1 645797 646288 R COG: COG0537; Pfam: PF01230; InterPro: IPR011151; hit family protein complement(645797..646288) Helicobacter pylori 83 12365458 YP_005785237.1 CDS murF NC_017375.1 646292 647773 R COG: COG0770; Pfam: PF08245; InterPro: IPR005863; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase complement(646292..647773) Helicobacter pylori 83 12365459 YP_005785238.1 CDS HMPREF0462_0671 NC_017375.1 647760 648485 R COG: COG0596; 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase complement(647760..648485) Helicobacter pylori 83 12365460 YP_005785239.1 CDS ddlA NC_017375.1 648485 649555 R COG: COG1181; Pfam: PF01820,PF07478; InterPro: IPR005905; D-alanine--D-alanine ligase complement(648485..649555) Helicobacter pylori 83 12365461 YP_005785240.1 CDS pgpA NC_017375.1 649605 650081 R COG: COG1267; Pfam: PF04608; InterPro: IPR007686; phosphatidylglycerophosphatase A complement(649605..650081) Helicobacter pylori 83 12365462 YP_005785241.1 CDS serC NC_017375.1 650229 651338 D COG: COG0075; Pfam: PF00266; InterPro: IPR015421; phosphoserine transaminase 650229..651338 Helicobacter pylori 83 12365463 YP_005785242.1 CDS HMPREF0462_0675 NC_017375.1 651347 651808 D COG: COG2236; Pfam: PF00156; xanthine guanine phosphoribosyl transferase (gpt) 651347..651808 Helicobacter pylori 83 12365464 YP_005785243.1 CDS HMPREF0462_0676 NC_017375.1 651810 653165 D COG: COG0621; Pfam: PF00919,PF04055; InterPro: IPR005840; 2-methylthioadenine synthetase 651810..653165 Helicobacter pylori 83 12365465 YP_005785244.1 CDS HMPREF0462_0677 NC_017375.1 653481 654197 D hypothetical protein 653481..654197 Helicobacter pylori 83 12365466 YP_005785245.1 CDS HMPREF0462_0678 NC_017375.1 654221 654490 D hypothetical protein 654221..654490 Helicobacter pylori 83 12365467 YP_005785246.1 CDS HMPREF0462_0679 NC_017375.1 654659 654955 D labile enterotoxin output A 654659..654955 Helicobacter pylori 83 12365468 YP_005785247.1 CDS HMPREF0462_0680 NC_017375.1 654888 655346 D labile enterotoxin output A 654888..655346 Helicobacter pylori 83 12365469 YP_005785248.1 CDS HMPREF0462_0681 NC_017375.1 655347 656201 D labile enterotoxin output A 655347..656201 Helicobacter pylori 83 12365470 YP_005785249.1 CDS HMPREF0462_0682 NC_017375.1 656309 656629 D hypothetical protein 656309..656629 Helicobacter pylori 83 12365471 YP_005785250.1 CDS HMPREF0462_0683 NC_017375.1 656626 657693 D ATP /GTP binding protein 656626..657693 Helicobacter pylori 83 12365472 YP_005785251.1 CDS HMPREF0462_0684 NC_017375.1 657716 658747 D COG: COG0037; Pfam: PF01171; InterPro: IPR012795; tRNA(Ile)-lysidine synthase 657716..658747 Helicobacter pylori 83 12365473 YP_005785252.1 CDS dusB NC_017375.1 658840 659826 D COG: COG0042; Pfam: PF01207; InterPro: IPR001269; tRNA-dihydrouridine synthase B 658840..659826 Helicobacter pylori 83 12365474 YP_005785253.1 CDS HMPREF0462_0686 NC_017375.1 659796 660713 D Pfam: PF01856; outer membrane protein 659796..660713 Helicobacter pylori 83 12365475 YP_005785254.1 CDS HMPREF0462_0687 NC_017375.1 660932 662881 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein SabA 660932..662881 Helicobacter pylori 83 12365476 YP_005785255.1 CDS dcuA NC_017375.1 662955 664286 R COG: COG2704; Pfam: PF03605; InterPro: IPR004668; anaerobic C4-dicarboxylate membrane transporter DcuA complement(662955..664286) Helicobacter pylori 83 12365477 YP_005785256.1 CDS ansB NC_017375.1 664362 665408 D COG: COG0252; Pfam: PF00710; InterPro: IPR004550; L-asparaginase 664362..665408 Helicobacter pylori 83 12365478 YP_005785257.1 CDS HMPREF0462_0690 NC_017375.1 665683 666144 R Pfam: PF06518; InterPro: IPR009488; hypothetical protein complement(665683..666144) Helicobacter pylori 83 12365479 YP_005785258.1 CDS HMPREF0462_0691 NC_017375.1 666173 666595 R Pfam: PF06518; InterPro: IPR009488; hypothetical protein complement(666173..666595) Helicobacter pylori 83 12365480 YP_005785259.1 CDS HMPREF0462_0692 NC_017375.1 666882 667514 D COG: COG1279; Pfam: PF01810; InterPro: IPR001123; LysE family L-lysine exporter 666882..667514 Helicobacter pylori 83 12365481 YP_005785260.1 CDS dnaX NC_017375.1 667583 669283 D COG: COG2812; Pfam: PF00004; InterPro: IPR012763; DNA polymerase III subunit gamma/tau DnaX 667583..669283 Helicobacter pylori 83 12365482 YP_005785261.1 CDS HMPREF0462_0694 NC_017375.1 669280 669681 D COG: COG0802; Pfam: PF02367; InterPro: IPR003442; hypothetical protein 669280..669681 Helicobacter pylori 83 12365483 YP_005785262.1 CDS HMPREF0462_0695 NC_017375.1 669694 670416 D COG: COG1137; Pfam: PF00005; InterPro: IPR003593; ABC transporter ATP-binding protein 669694..670416 Helicobacter pylori 83 12365484 YP_005785263.1 CDS HMPREF0462_0696 NC_017375.1 670419 671663 D COG: COG1508; Pfam: PF00309,PF04963,PF04552; InterPro: IPR000394; RNA polymerase factor sigma-54 670419..671663 Helicobacter pylori 83 12365485 YP_005785264.1 CDS HMPREF0462_0697 NC_017375.1 671741 671884 R hypothetical protein complement(671741..671884) Helicobacter pylori 83 12365486 YP_005785265.1 CDS HMPREF0462_0698 NC_017375.1 672059 672973 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 672059..672973 Helicobacter pylori 83 12365487 YP_005785266.1 CDS exsB NC_017375.1 673038 673718 R COG: COG0603; Pfam: PF06508; InterPro: IPR004479; transcription regulator ExsB complement(673038..673718) Helicobacter pylori 83 12365488 YP_005785267.1 CDS papS NC_017375.1 673780 675003 D COG: COG0617; Pfam: PF01743; InterPro: IPR002646; poly(A) polymerase 673780..675003 Helicobacter pylori 83 12365489 YP_005785268.1 CDS frp NC_017375.1 675000 675773 D COG: COG0778; Pfam: PF00881; InterPro: IPR000415; NAD(P)H-flavin oxidoreductase 675000..675773 Helicobacter pylori 83 12365490 YP_005785269.1 CDS gltX2 NC_017375.1 675939 677258 D COG: COG0008; Pfam: PF00749; InterPro: IPR004527; glutamate--tRNA ligase 675939..677258 Helicobacter pylori 83 12365491 YP_005785270.1 CDS HMPREF0462_0703 NC_017375.1 677255 677548 D COG: COG0762; Pfam: PF02325; InterPro: IPR003425; yggt family protein 677255..677548 Helicobacter pylori 83 12365492 YP_005785271.1 CDS slt NC_017375.1 677518 679239 D COG: COG0741; Pfam: PF01464; InterPro: IPR008258; soluble lytic murein transglycosylase 677518..679239 Helicobacter pylori 83 12365493 YP_005785272.1 CDS galU NC_017375.1 679236 680057 D COG: COG1210; Pfam: PF00483; InterPro: IPR005835; UTP-glucose-1-phosphate uridylyltransferase 679236..680057 Helicobacter pylori 83 12365494 YP_005785273.1 CDS HMPREF0462_0706 NC_017375.1 680069 680476 D hypothetical protein 680069..680476 Helicobacter pylori 83 12365495 YP_005785274.1 CDS murA NC_017375.1 680479 681747 D COG: COG0766; Pfam: PF00275; InterPro: IPR005750; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 680479..681747 Helicobacter pylori 83 12365496 YP_005785275.1 CDS aspA NC_017375.1 681805 683211 D COG: COG1027; Pfam: PF00206; InterPro: IPR004708; aspartate ammonia-lyase 681805..683211 Helicobacter pylori 83 12365497 YP_005785276.1 CDS HMPREF0462_0709 NC_017375.1 683217 683846 D Pfam: PF03167; family 4 uracil-DNA glycosylase 683217..683846 Helicobacter pylori 83 12365498 YP_005785277.1 CDS HMPREF0462_0710 NC_017375.1 683855 684901 R InterPro: IPR001503; fucosyltransferase complement(683855..684901) Helicobacter pylori 83 12365499 YP_005785278.1 CDS serB NC_017375.1 685157 685780 R COG: COG0560; Pfam: PF00702; InterPro: IPR004469; phosphoserine phosphatase SerB complement(685157..685780) Helicobacter pylori 83 12365500 YP_005785279.1 CDS ftnB NC_017375.1 685796 686299 R COG: COG1528; Pfam: PF00210; InterPro: IPR012347; nonheme iron-containing ferritin complement(685796..686299) Helicobacter pylori 83 12365501 YP_005785280.1 CDS HMPREF0462_0713 NC_017375.1 686609 687691 D COG: COG1060; Pfam: PF04055; InterPro: IPR005244; SCO4494 family menaquinone biosynthesis protein 686609..687691 Helicobacter pylori 83 12365502 YP_005785281.1 CDS yaeT NC_017375.1 687864 690494 D COG: COG4775; Pfam: PF07244,PF01103; InterPro: IPR000184; outer membrane protein assembly complex 687864..690494 Helicobacter pylori 83 12365503 YP_005785282.1 CDS HMPREF0462_0715 NC_017375.1 690496 691557 D COG: COG1060; Pfam: PF04055; InterPro: IPR005244; SCO4550 family menaquinone biosynthesis protein 690496..691557 Helicobacter pylori 83 12365504 YP_005785283.1 CDS ymxG NC_017375.1 691554 692858 D COG: COG0612; Pfam: PF00675,PF05193; InterPro: IPR011237; processing protease 691554..692858 Helicobacter pylori 83 12365505 YP_005785284.1 CDS gatB NC_017375.1 692855 694282 D COG: COG0064; Pfam: PF02934,PF01162,PF02637; InterPro: IPR004413; glutamyl-tRNA(Gln) amidotransferase subunit B 692855..694282 Helicobacter pylori 83 12365506 YP_005785285.1 CDS HMPREF0462_0718 NC_017375.1 694282 695517 D Pfam: PF09312; SurA domain-containing protein 694282..695517 Helicobacter pylori 83 12365507 YP_005785286.1 CDS HMPREF0462_0719 NC_017375.1 695528 696535 D hypothetical protein 695528..696535 Helicobacter pylori 83 12365508 YP_005785287.1 CDS rnhA NC_017375.1 696536 697000 D COG: COG0328; Pfam: PF00075; InterPro: IPR002156; ribonuclease HI 696536..697000 Helicobacter pylori 83 12365509 YP_005785288.1 CDS rnc NC_017375.1 696975 697694 D COG: COG0571; Pfam: PF00636,PF00035; InterPro: IPR011907; ribonuclease III 696975..697694 Helicobacter pylori 83 12365510 YP_005785289.1 CDS aroC NC_017375.1 697691 698788 D COG: COG0082; Pfam: PF01264; InterPro: IPR000453; chorismate synthase 697691..698788 Helicobacter pylori 83 12365511 YP_005785290.1 CDS HMPREF0462_0723 NC_017375.1 698826 699341 D hypothetical protein 698826..699341 Helicobacter pylori 83 12365512 YP_005785291.1 CDS hemN NC_017375.1 699341 700714 D COG: COG0635; Pfam: PF04055,PF06969; InterPro: IPR004558; oxygen-independent coproporphyrinogen III oxidase 699341..700714 Helicobacter pylori 83 12365513 YP_005785292.1 CDS HMPREF0462_0725 NC_017375.1 700711 702000 D COG: COG0247; Pfam: PF00037,PF02754; InterPro: IPR004017; iron-sulfur cluster-binding domain protein 700711..702000 Helicobacter pylori 83 12365514 YP_005785293.1 CDS HMPREF0462_0726 NC_017375.1 702079 702786 D COG: COG4889; Pfam: PF04471,PF04851; InterPro: IPR007560; restriction endonuclease superfamily protein 702079..702786 Helicobacter pylori 83 12365515 YP_005785294.1 CDS HMPREF0462_0727 NC_017375.1 702767 706909 D COG: COG4889; Pfam: PF04851,PF00271; InterPro: IPR006935; helicase domain-containing protein 702767..706909 Helicobacter pylori 83 12365516 YP_005785295.1 CDS HMPREF0462_0728 NC_017375.1 706906 707754 D hypothetical protein 706906..707754 Helicobacter pylori 83 12365517 YP_005785296.1 CDS HMPREF0462_0729 NC_017375.1 707853 708257 D hypothetical protein 707853..708257 Helicobacter pylori 83 12365518 YP_005785297.1 CDS HMPREF0462_0730 NC_017375.1 708379 709191 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 708379..709191 Helicobacter pylori 83 12365519 YP_005785298.1 CDS aspC NC_017375.1 709350 710522 D COG: COG0436; Pfam: PF00155; InterPro: IPR004839; aspartate transaminase 709350..710522 Helicobacter pylori 83 12365520 YP_005785299.1 CDS HMPREF0462_0732 NC_017375.1 710727 712133 D hypothetical protein 710727..712133 Helicobacter pylori 83 12365521 YP_005785300.1 CDS xerC NC_017375.1 712140 713210 D COG: COG0582; Pfam: PF00589; InterPro: IPR002104; tyrosine recombinase XerC 712140..713210 Helicobacter pylori 83 12365522 YP_005785301.1 CDS ogt NC_017375.1 713273 713650 R COG: COG0350; Pfam: PF02870,PF01035; InterPro: IPR014048; methylated-DNA--protein-cysteine methyltransferase complement(713273..713650) Helicobacter pylori 83 12365523 YP_005785302.1 CDS dat NC_017375.1 713647 713778 R Pfam: PF02870; methylated-DNA--protein-cysteine methyltransferase complement(713647..713778) Helicobacter pylori 83 12365524 YP_005785303.1 CDS HMPREF0462_0736 NC_017375.1 713782 714549 R COG: COG0730; Pfam: PF01925; InterPro: IPR002781; hypothetical protein complement(713782..714549) Helicobacter pylori 83 12365525 YP_005785304.1 CDS wbpB NC_017375.1 714607 715554 R COG: COG0673; Pfam: PF01408,PF02894; InterPro: IPR016040; gfo/Idh/MocA family oxidoreductase complement(714607..715554) Helicobacter pylori 83 12365526 YP_005785305.1 CDS nrdA NC_017375.1 715616 717982 R COG: COG0209; Pfam: PF03477,PF00317,PF02867; InterPro: IPR013346; ribonucleotide-diphosphate reductase subunit alpha complement(715616..717982) Helicobacter pylori 83 12365527 YP_005785306.1 CDS HMPREF0462_0739 NC_017375.1 718153 718623 R hypothetical protein complement(718153..718623) Helicobacter pylori 83 12365528 YP_005785307.1 CDS HMPREF0462_0740 NC_017375.1 718647 718997 R hypothetical protein complement(718647..718997) Helicobacter pylori 83 12365529 YP_005785308.1 CDS HMPREF0462_0741 NC_017375.1 719293 719832 R hypothetical protein complement(719293..719832) Helicobacter pylori 83 12365530 YP_005785309.1 CDS HMPREF0462_0742 NC_017375.1 719839 720174 R hypothetical protein complement(719839..720174) Helicobacter pylori 83 12365531 YP_005785310.1 CDS glmU NC_017375.1 720419 721756 R COG: COG1207; Pfam: PF01128,PF00132; InterPro: IPR005882; UDP-N-acetylglucosamine diphosphorylase complement(720419..721756) Helicobacter pylori 83 12365532 YP_005785311.1 CDS fliP NC_017375.1 721808 722554 D COG: COG1338; Pfam: PF00813; InterPro: IPR005837; flagellar biosynthetic protein FliP 721808..722554 Helicobacter pylori 83 12365533 YP_005785312.1 CDS fecA2 NC_017375.1 722594 724897 R COG: COG4772; Pfam: PF07715,PF00593; InterPro: IPR000531; iron(III) dicitrate transporter complement(722594..724897) Helicobacter pylori 83 12365534 YP_005785313.1 CDS feoB NC_017375.1 725144 727078 R COG: COG0370; Pfam: PF01926,PF02421,PF07670,PF07664; InterPro: IPR003373; FeoB family ferrous iron (Fe2+) uptake protein complement(725144..727078) Helicobacter pylori 83 12365535 YP_005785314.1 CDS wlaX NC_017375.1 727191 728021 D COG: COG3298; polysaccharide biosynthesis protein 727191..728021 Helicobacter pylori 83 12365536 YP_005785315.1 CDS dcm NC_017375.1 728106 729410 R COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase complement(728106..729410) Helicobacter pylori 83 12365537 YP_005785316.1 CDS nlaIVR NC_017375.1 729473 730114 D type II site-specific deoxyribonuclease 729473..730114 Helicobacter pylori 83 12365538 YP_005785317.1 CDS wlaX2 NC_017375.1 730224 730625 D COG: COG3298; polysaccharide biosynthesis protein 730224..730625 Helicobacter pylori 83 12365539 YP_005785318.1 CDS atoB NC_017375.1 730802 731977 D COG: COG0183; Pfam: PF00108,PF02803; InterPro: IPR002155; acetyl-CoA acetyltransferase 730802..731977 Helicobacter pylori 83 12365540 YP_005785319.1 CDS pcaI NC_017375.1 731988 732686 D COG: COG1788; Pfam: PF01144; InterPro: IPR012792; 3-oxoadipate CoA-transferase subunit A 731988..732686 Helicobacter pylori 83 12365541 YP_005785320.1 CDS dxnH NC_017375.1 732683 733306 D COG: COG2057; Pfam: PF01144; InterPro: IPR004165; 3-oxoadipate CoA-succinyl transferase 732683..733306 Helicobacter pylori 83 12365542 YP_005785321.1 CDS atoE NC_017375.1 733325 734143 D COG: COG2031; Pfam: PF02667; InterPro: IPR006160; short-chain fatty acids transporter 733325..734143 Helicobacter pylori 83 12365543 YP_005785322.1 CDS atoE2 NC_017375.1 734124 734690 D COG: COG2031; Pfam: PF02667; InterPro: IPR006160; short-chain fatty acid transporter 734124..734690 Helicobacter pylori 83 12365544 YP_005785323.1 CDS HMPREF0462_0756 NC_017375.1 734811 735812 D COG: COG3528; outer membrane protein 734811..735812 Helicobacter pylori 83 12365545 YP_005785324.1 CDS hyuA NC_017375.1 736022 736204 D Pfam: PF05378; hydantoin utilization protein A 736022..736204 Helicobacter pylori 83 12365546 YP_005785325.1 CDS hyuA2 NC_017375.1 736252 738165 D COG: COG0145; Pfam: PF05378,PF01968; InterPro: IPR002821; hydantoin utilization protein A 736252..738165 Helicobacter pylori 83 12365547 YP_005785326.1 CDS HMPREF0462_0759 NC_017375.1 738178 740475 D COG: COG0146; Pfam: PF02538; InterPro: IPR003692; N-methylhydantoinase 738178..740475 Helicobacter pylori 83 12365548 YP_005785327.1 CDS acxC NC_017375.1 740465 740992 D COG: COG4647; Pfam: PF08882; InterPro: IPR014979; acetone carboxylase subunit gamma 740465..740992 Helicobacter pylori 83 12365549 YP_005785328.1 CDS HMPREF0462_0761 NC_017375.1 741300 742328 D hypothetical protein 741300..742328 Helicobacter pylori 83 12365550 YP_005785329.1 CDS dgkA NC_017375.1 742321 742707 D COG: COG0818; Pfam: PF01219; InterPro: IPR000829; diacylglycerol kinase 742321..742707 Helicobacter pylori 83 12365551 YP_005785330.1 CDS gyrA NC_017375.1 742727 745213 D COG: COG0188; Pfam: PF00521,PF03989; InterPro: IPR005743; DNA topoisomerase subunit A 742727..745213 Helicobacter pylori 83 12365552 YP_005785331.1 CDS HMPREF0462_0764 NC_017375.1 745210 745686 D hypothetical protein 745210..745686 Helicobacter pylori 83 12365553 YP_005785332.1 CDS ntrC NC_017375.1 745683 746828 D COG: COG2204; Pfam: PF00072,PF00158; InterPro: IPR002078; nitrogen regulation protein NR(I) 745683..746828 Helicobacter pylori 83 12365554 YP_005785333.1 CDS uvrA NC_017375.1 747145 749970 R COG: COG0178; Pfam: PF00005; InterPro: IPR004602; excision endonuclease subunit UvrA complement(747145..749970) Helicobacter pylori 83 12365555 YP_005785334.1 CDS hopE NC_017375.1 750145 750966 D Pfam: PF01856; InterPro: IPR002718; HOP family outer membrane porin 750145..750966 Helicobacter pylori 83 12365556 YP_005785335.1 CDS mraW NC_017375.1 751160 752086 D COG: COG0275; Pfam: PF01795; InterPro: IPR002903; S-adenosyl-methyltransferase MraW 751160..752086 Helicobacter pylori 83 12365557 YP_005785336.1 CDS HMPREF0462_0769 NC_017375.1 752106 752450 D hypothetical protein 752106..752450 Helicobacter pylori 83 12365558 YP_005785337.1 CDS HMPREF0462_0770 NC_017375.1 752695 753597 D COG: COG1912; Pfam: PF01887; InterPro: IPR002747; hypothetical protein 752695..753597 Helicobacter pylori 83 12365559 YP_005785338.1 CDS HMPREF0462_0771 NC_017375.1 753713 753892 D Pfam: PF01856; InterPro: IPR002718; hypothetical protein 753713..753892 Helicobacter pylori 83 12365560 YP_005785339.1 CDS HMPREF0462_0772 NC_017375.1 754080 755300 D COG: COG1896; hypothetical protein 754080..755300 Helicobacter pylori 83 12365561 YP_005785340.1 CDS HMPREF0462_0773 NC_017375.1 755418 756332 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(755418..756332) Helicobacter pylori 83 12365562 YP_005785341.1 CDS HMPREF0462_0774 NC_017375.1 756507 756959 D hypothetical protein 756507..756959 Helicobacter pylori 83 12365563 YP_005785342.1 CDS HMPREF0462_0775 NC_017375.1 757079 757492 D hypothetical protein 757079..757492 Helicobacter pylori 83 12365564 YP_005785343.1 CDS HMPREF0462_0776 NC_017375.1 757497 759035 R hypothetical protein complement(757497..759035) Helicobacter pylori 83 12365565 YP_005785344.1 CDS hybD NC_017375.1 759037 759573 R COG: COG0680; Pfam: PF01750; InterPro: IPR000671; hydrogenase expression/formation protein complement(759037..759573) Helicobacter pylori 83 12365566 YP_005785345.1 CDS HMPREF0462_0778 NC_017375.1 759570 760244 R COG: COG1969; Pfam: PF01292; InterPro: IPR000516; quinone-reactive Ni/Fe hydrogenase HydC complement(759570..760244) Helicobacter pylori 83 12365567 YP_005785346.1 CDS hydB NC_017375.1 760257 761993 R COG: COG0374; Pfam: PF00374; InterPro: IPR001501; quinone-reactive Ni/Fe-hydrogenase complement(760257..761993) Helicobacter pylori 83 12365568 YP_005785347.1 CDS hydA NC_017375.1 762010 763164 R COG: COG1740; Pfam: PF08425,PF01058; InterPro: IPR001821; quinone-reactive Ni/Fe-hydrogenase complement(762010..763164) Helicobacter pylori 83 12365569 YP_005785348.1 CDS mdaB NC_017375.1 763298 763882 D COG: COG2249; Pfam: PF02525; InterPro: IPR003680; NAD(P)H quinone dehydrogenase MdaB 763298..763882 Helicobacter pylori 83 12365570 YP_005785349.1 CDS HMPREF0462_0782 NC_017375.1 763848 763967 R hypothetical protein complement(763848..763967) Helicobacter pylori 83 12365571 YP_005785350.1 CDS HMPREF0462_0783 NC_017375.1 763933 765984 R COG: COG1479; Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein complement(763933..765984) Helicobacter pylori 83 12365572 YP_005785351.1 CDS HMPREF0462_0784 NC_017375.1 766099 767157 R COG: COG0790; Pfam: PF08238; InterPro: IPR011990; hypothetical protein complement(766099..767157) Helicobacter pylori 83 12365573 YP_005785352.1 CDS dapD NC_017375.1 767169 768383 R COG: COG2171; Pfam: PF00132; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase complement(767169..768383) Helicobacter pylori 83 12365574 YP_005785353.1 CDS ispG NC_017375.1 768386 769465 R COG: COG0821; Pfam: PF04551; InterPro: IPR004588; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(768386..769465) Helicobacter pylori 83 12365575 YP_005785354.1 CDS dapC NC_017375.1 769620 770747 D COG: COG0436; Pfam: PF00155; InterPro: IPR015421; succinyldiaminopimelate transaminase 769620..770747 Helicobacter pylori 83 12365576 YP_005785355.1 CDS murC NC_017375.1 770740 772089 D COG: COG0773; Pfam: PF01225,PF08245,PF02875; InterPro: IPR005758; UDP-N-acetylmuramate--L-alanine ligase 770740..772089 Helicobacter pylori 83 12365577 YP_005785356.1 CDS HMPREF0462_0789 NC_017375.1 772089 772454 D hypothetical protein 772089..772454 Helicobacter pylori 83 12365578 YP_005785357.1 CDS mutS NC_017375.1 772485 774734 D COG: COG1193; Pfam: PF00488,PF01713; InterPro: IPR005747; DNA mismatch repair protein 772485..774734 Helicobacter pylori 83 12365579 YP_005785358.1 CDS ppa NC_017375.1 774886 775407 R COG: COG0221; Pfam: PF00719; InterPro: IPR008162; inorganic diphosphatase complement(774886..775407) Helicobacter pylori 83 12365580 YP_005785359.1 CDS HMPREF0462_0792 NC_017375.1 775463 776260 R Pfam: PF01755; jhp0563 family glycosyltransferase complement(775463..776260) Helicobacter pylori 83 12365581 YP_005785360.1 CDS HMPREF0462_0793 NC_017375.1 776202 776768 R Pfam: PF01755; InterPro: IPR002654; lipopolysaccharide biosynthesis protein complement(776202..776768) Helicobacter pylori 83 12365582 YP_005785361.1 CDS HMPREF0462_0794 NC_017375.1 776821 777819 R COG: COG3306; Pfam: PF01755; InterPro: IPR002654; jhp0562 family glycosyltransferase complement(776821..777819) Helicobacter pylori 83 12365583 YP_005785362.1 CDS adk NC_017375.1 777844 778419 R COG: COG0563; Pfam: PF00406; InterPro: IPR000850; adenylate kinase complement(777844..778419) Helicobacter pylori 83 12365584 YP_005785363.1 CDS aspS NC_017375.1 778436 780169 R COG: COG0173; Pfam: PF01336,PF00152,PF02938; InterPro: IPR004524; aspartate--tRNA ligase complement(778436..780169) Helicobacter pylori 83 12365585 YP_005785364.1 CDS cheV2 NC_017375.1 780204 781145 R COG: COG0835; Pfam: PF01584,PF00072; InterPro: IPR002545; chemotaxis protein complement(780204..781145) Helicobacter pylori 83 12365586 YP_005785365.1 CDS ligA NC_017375.1 781223 783193 D COG: COG0272; Pfam: PF01653,PF03120,PF03119,PF00533; InterPro: IPR001679; NAD-dependent DNA ligase LigA 781223..783193 Helicobacter pylori 83 12365587 YP_005785366.1 CDS HMPREF0462_0799 NC_017375.1 783294 783626 D hypothetical protein 783294..783626 Helicobacter pylori 83 12365588 YP_005785367.1 CDS HMPREF0462_0800 NC_017375.1 783863 783988 R hypothetical protein complement(783863..783988) Helicobacter pylori 83 12365589 YP_005785368.1 CDS HMPREF0462_0801 NC_017375.1 784178 784381 D ABC transporter ATP-binding protein 784178..784381 Helicobacter pylori 83 12365590 YP_005785369.1 CDS HMPREF0462_0802 NC_017375.1 784387 784656 D ABC transporter ATP-binding protein 784387..784656 Helicobacter pylori 83 12365591 YP_005785370.1 CDS HMPREF0462_0803 NC_017375.1 784656 785405 D COG: COG0842; Pfam: PF01061; multidrug ABC superfamily ATP binding cassette transporter 784656..785405 Helicobacter pylori 83 12365592 YP_005785371.1 CDS HMPREF0462_0804 NC_017375.1 785464 795099 R COG: COG5651; Pfam: PF03077,PF03797; InterPro: IPR005546; vacuolating cytotoxin (VacA) family protein complement(785464..795099) Helicobacter pylori 83 12365593 YP_005785372.1 CDS HMPREF0462_0805 NC_017375.1 795191 795760 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(795191..795760) Helicobacter pylori 83 12365594 YP_005785373.1 CDS acrB NC_017375.1 795757 798837 R COG: COG0841; Pfam: PF00873; InterPro: IPR001036; acriflavine resistance protein complement(795757..798837) Helicobacter pylori 83 12365595 YP_005785374.1 CDS mtrC NC_017375.1 798850 799554 R COG: COG0845; membrane fusion protein complement(798850..799554) Helicobacter pylori 83 12365596 YP_005785375.1 CDS tolC NC_017375.1 799564 800997 R COG: COG1538; Pfam: PF02321; InterPro: IPR003423; outer membrane protein function unclear complement(799564..800997) Helicobacter pylori 83 12365597 YP_005785376.1 CDS hemE NC_017375.1 801007 802029 R COG: COG0407; Pfam: PF01208; InterPro: IPR006361; uroporphyrinogen decarboxylase complement(801007..802029) Helicobacter pylori 83 12365598 YP_005785377.1 CDS HMPREF0462_0810 NC_017375.1 802097 802714 R hypothetical protein complement(802097..802714) Helicobacter pylori 83 12365599 YP_005785378.1 CDS HMPREF0462_0811 NC_017375.1 802711 803367 R COG: COG2231; Pfam: PF00730,PF00633; InterPro: IPR003265; endonuclease III complement(802711..803367) Helicobacter pylori 83 12365600 YP_005785379.1 CDS flaA NC_017375.1 803485 805017 R COG: COG1344; Pfam: PF00669,PF07196,PF00700; InterPro: IPR001492; flagellin A complement(803485..805017) Helicobacter pylori 83 12365601 YP_005785380.1 CDS spaB NC_017375.1 805408 806283 D ABC transporter ATP-binding protein 805408..806283 Helicobacter pylori 83 12365602 YP_005785381.1 CDS spaB2 NC_017375.1 806243 806962 D COG: COG1132; Pfam: PF00005; InterPro: IPR003439; ABC transporter ATP-binding protein 806243..806962 Helicobacter pylori 83 12365603 YP_005785382.1 CDS hylB NC_017375.1 807032 808333 D COG: COG0840; Pfam: PF00015; InterPro: IPR004089; hemolysin secretion protein 807032..808333 Helicobacter pylori 83 12365604 YP_005785383.1 CDS bioF NC_017375.1 808356 809477 D COG: COG0156; Pfam: PF00155; InterPro: IPR015421; 8-amino-7-oxononanoate synthase 808356..809477 Helicobacter pylori 83 12365605 YP_005785384.1 CDS pbpA NC_017375.1 809477 811456 D COG: COG0744; Pfam: PF00912,PF00905; InterPro: IPR011816; penicillin-binding protein 1A 809477..811456 Helicobacter pylori 83 12365606 YP_005785385.1 CDS HMPREF0462_0818 NC_017375.1 811459 812037 R tumor necrosis factor alpha-inducing protein complement(811459..812037) Helicobacter pylori 83 12365607 YP_005785386.1 CDS HMPREF0462_0819 NC_017375.1 812511 813980 R COG: COG1495; Pfam: PF02600; InterPro: IPR003752; DsbB family protein complement(812511..813980) Helicobacter pylori 83 12365609 YP_005785387.1 CDS HMPREF0462_0820 NC_017375.1 813989 814153 R hypothetical protein complement(813989..814153) Helicobacter pylori 83 12365610 YP_005785388.1 CDS HMPREF0462_0821 NC_017375.1 814296 814952 R hypothetical protein complement(814296..814952) Helicobacter pylori 83 12365611 YP_005785389.1 CDS HMPREF0462_0822 NC_017375.1 815011 816072 R COG: COG5610; Pfam: PF00702; hypothetical protein complement(815011..816072) Helicobacter pylori 83 12365612 YP_005785390.1 CDS oorC NC_017375.1 816183 816737 R COG: COG1014; Pfam: PF01558; InterPro: IPR002869; 2-oxoglutarate:acceptor oxidoreductase complement(816183..816737) Helicobacter pylori 83 12365613 YP_005785391.1 CDS oorB NC_017375.1 816737 817558 R COG: COG1013; Pfam: PF02775; InterPro: IPR011766; 2-oxoglutarate:acceptor oxidoreductase complement(816737..817558) Helicobacter pylori 83 12365614 YP_005785392.1 CDS oorA NC_017375.1 817560 818687 R COG: COG0674; Pfam: PF01855; InterPro: IPR002880; 2-oxoglutarate:acceptor oxidoreductase complement(817560..818687) Helicobacter pylori 83 12365615 YP_005785393.1 CDS oorD NC_017375.1 818687 819028 R COG: COG1146; Pfam: PF00037; 2-oxoglutarate:acceptor oxidoreductase complement(818687..819028) Helicobacter pylori 83 12365616 YP_005785394.1 CDS pabC NC_017375.1 819207 820145 R COG: COG1559; Pfam: PF02618; InterPro: IPR003770; aminodeoxychorismate lyase complement(819207..820145) Helicobacter pylori 83 12365617 YP_005785395.1 CDS HMPREF0462_0828 NC_017375.1 820120 823059 D hypothetical protein 820120..823059 Helicobacter pylori 83 12365618 YP_005785396.1 CDS feoA NC_017375.1 823056 823286 D COG: COG1918; Pfam: PF04023; InterPro: IPR007167; ferrous iron transport protein A 823056..823286 Helicobacter pylori 83 12365619 YP_005785397.1 CDS nth NC_017375.1 823283 823939 D COG: COG0177; Pfam: PF00730,PF00633; InterPro: IPR005759; endonuclease III 823283..823939 Helicobacter pylori 83 12365620 YP_005785398.1 CDS fliN NC_017375.1 824021 824392 D COG: COG1886; Pfam: PF01052; InterPro: IPR012826; flagellar switch protein 824021..824392 Helicobacter pylori 83 12365621 YP_005785399.1 CDS HMPREF0462_0832 NC_017375.1 824389 825054 D hypothetical protein 824389..825054 Helicobacter pylori 83 12365622 YP_005785400.1 CDS HMPREF0462_0833 NC_017375.1 825066 825263 D hypothetical protein 825066..825263 Helicobacter pylori 83 12365623 YP_005785401.1 CDS HMPREF0462_0834 NC_017375.1 825247 826203 D COG: COG0810; InterPro: IPR006260; siderophore-mediated iron transport protein 825247..826203 Helicobacter pylori 83 12365624 YP_005785402.1 CDS pyrC2 NC_017375.1 826207 827226 D COG: COG0418; InterPro: IPR004721; dihydroorotase 826207..827226 Helicobacter pylori 83 12365625 YP_005785403.1 CDS HMPREF0462_0836 NC_017375.1 827244 828320 D hypothetical protein 827244..828320 Helicobacter pylori 83 12365626 YP_005785404.1 CDS HMPREF0462_0837 NC_017375.1 828408 828881 D hypothetical protein 828408..828881 Helicobacter pylori 83 12365627 YP_005785405.1 CDS HMPREF0462_0838 NC_017375.1 828887 830917 D Pfam: PF00884; InterPro: IPR000917; hypothetical protein 828887..830917 Helicobacter pylori 83 12365628 YP_005785406.1 CDS folD NC_017375.1 830989 831882 D COG: COG0190; Pfam: PF00763,PF02882; InterPro: IPR000672; bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase 830989..831882 Helicobacter pylori 83 12365629 YP_005785407.1 CDS lepB NC_017375.1 831882 832754 D COG: COG0681; Pfam: PF00717; InterPro: IPR000223; signal peptidase I LepB 831882..832754 Helicobacter pylori 83 12365630 YP_005785408.1 CDS HMPREF0462_0841 NC_017375.1 832763 833461 D COG: COG1994; Pfam: PF02163; InterPro: IPR008915; peptidase M50 832763..833461 Helicobacter pylori 83 12365631 YP_005785409.1 CDS rpiB NC_017375.1 833482 833937 D COG: COG0698; Pfam: PF02502; InterPro: IPR003500; ribose 5-phosphate isomerase B 833482..833937 Helicobacter pylori 83 12365632 YP_005785410.1 CDS HMPREF0462_0843 NC_017375.1 833990 834322 D membrane protein 833990..834322 Helicobacter pylori 83 12365633 YP_005785411.1 CDS apt NC_017375.1 834380 834919 D COG: COG0503; Pfam: PF00156; InterPro: IPR005764; adenine phosphoribosyltransferase 834380..834919 Helicobacter pylori 83 12365634 YP_005785412.1 CDS HMPREF0462_0845 NC_017375.1 834934 835512 D COG: COG0586; DedA family protein 834934..835512 Helicobacter pylori 83 12365635 YP_005785413.1 CDS pepA NC_017375.1 835574 837064 D COG: COG0260; Pfam: PF02789,PF00883; InterPro: IPR011356; cytosol aminopeptidase 835574..837064 Helicobacter pylori 83 12365636 YP_005785414.1 CDS ychF NC_017375.1 837066 838166 D COG: COG0012; Pfam: PF01926,PF06071; InterPro: IPR004396; GTP-binding protein YchF 837066..838166 Helicobacter pylori 83 12365637 YP_005785415.1 CDS HMPREF0462_0848 NC_017375.1 838200 839072 D Pfam: PF04055; radical SAM 838200..839072 Helicobacter pylori 83 12365638 YP_005785416.1 CDS HMPREF0462_0849 NC_017375.1 839202 840248 R COG: COG0628; Pfam: PF01594; InterPro: IPR002549; membrane protein complement(839202..840248) Helicobacter pylori 83 12365639 YP_005785417.1 CDS dapF NC_017375.1 840364 841200 D COG: COG0253; Pfam: PF01678; InterPro: IPR001653; diaminopimelate epimerase 840364..841200 Helicobacter pylori 83 12365640 YP_005785418.1 CDS HMPREF0462_0851 NC_017375.1 841291 841938 D COG: COG3059; Pfam: PF04224; InterPro: IPR007339; hypothetical protein 841291..841938 Helicobacter pylori 83 12365641 YP_005785419.1 CDS HMPREF0462_0852 NC_017375.1 841962 842207 R hypothetical protein complement(841962..842207) Helicobacter pylori 83 12365642 YP_005785420.1 CDS HMPREF0462_0853 NC_017375.1 842485 843630 D hypothetical protein 842485..843630 Helicobacter pylori 83 12365643 YP_005785421.1 CDS rpsU NC_017375.1 843690 843944 D COG: COG0828; Pfam: PF01165; InterPro: IPR001911; 30S ribosomal protein S21 843690..843944 Helicobacter pylori 83 12365644 YP_005785422.1 CDS fabG NC_017375.1 843981 844724 D COG: COG1028; Pfam: PF00106; InterPro: IPR016040; 3-oxoacyl-ACP reductase 843981..844724 Helicobacter pylori 83 12365645 YP_005785423.1 CDS HMPREF0462_0856 NC_017375.1 844955 845191 D COG: COG0236; Pfam: PF00550; InterPro: IPR003231; acyl carrier protein 844955..845191 Helicobacter pylori 83 12365646 YP_005785424.1 CDS fabF NC_017375.1 845517 846731 D COG: COG0304; Pfam: PF00109,PF02801; InterPro: IPR000794; 3-oxoacyl-(acyl-carrier-protein) synthase II 845517..846731 Helicobacter pylori 83 12365647 YP_005785425.1 CDS accA NC_017375.1 846754 847692 D COG: COG0825; Pfam: PF03255,PF01039; InterPro: IPR001095; acetyl-coA carboxylase carboxyl transferase subunit alpha 846754..847692 Helicobacter pylori 83 12365648 YP_005785426.1 CDS HMPREF0462_0859 NC_017375.1 847772 847951 R hypothetical protein complement(847772..847951) Helicobacter pylori 83 12365649 YP_005785427.1 CDS HMPREF0462_0860 NC_017375.1 848160 848597 D hypothetical protein 848160..848597 Helicobacter pylori 83 12365650 YP_005785428.1 CDS HMPREF0462_0861 NC_017375.1 848668 849489 R hypothetical protein complement(848668..849489) Helicobacter pylori 83 12365651 YP_005785429.1 CDS HMPREF0462_0862 NC_017375.1 849486 850451 R hypothetical protein complement(849486..850451) Helicobacter pylori 83 12365652 YP_005785430.1 CDS HMPREF0462_0863 NC_017375.1 850464 851147 R COG: COG0566; Pfam: PF08032,PF00588; InterPro: IPR004441; RNA methyltransferase complement(850464..851147) Helicobacter pylori 83 12365653 YP_005785431.1 CDS HMPREF0462_0864 NC_017375.1 851160 852023 R COG: COG0313; Pfam: PF00590; InterPro: IPR008189; tetrapyrrole methylase complement(851160..852023) Helicobacter pylori 83 12365654 YP_005785432.1 CDS rpmE NC_017375.1 852048 852251 R COG: COG0254; Pfam: PF01197; InterPro: IPR002150; 50S ribosomal protein L31 complement(852048..852251) Helicobacter pylori 83 12365655 YP_005785433.1 CDS rho NC_017375.1 852516 853832 D COG: COG1158; Pfam: PF07498,PF07497,PF00006; InterPro: IPR004665; transcription termination factor Rho 852516..853832 Helicobacter pylori 83 12365656 YP_005785434.1 CDS murI NC_017375.1 853869 854636 D COG: COG0796; Pfam: PF01177; InterPro: IPR004391; glutamate racemase 853869..854636 Helicobacter pylori 83 12365657 YP_005785435.1 CDS tnpB3 NC_017375.1 854782 855033 D Pfam: PF07282; InterPro: IPR010095; transposase 854782..855033 Helicobacter pylori 83 12365658 YP_005785436.1 CDS HMPREF0462_0869 NC_017375.1 855121 858651 R Pfam: PF03507; InterPro: IPR005169; cytotoxicity-associated immunodominantigen complement(855121..858651) Helicobacter pylori 83 12365659 YP_005785437.1 CDS cagB NC_017375.1 858903 859130 D cag pathogenicity island protein B 858903..859130 Helicobacter pylori 83 12365660 YP_005785438.1 CDS HMPREF0462_0871 NC_017375.1 859304 859651 D cag pathogenicity island protein 859304..859651 Helicobacter pylori 83 12365661 YP_005785439.1 CDS HMPREF0462_0872 NC_017375.1 859635 860276 D cag pathogenicity island protein 859635..860276 Helicobacter pylori 83 12365662 YP_005785440.1 CDS cagE NC_017375.1 860285 863236 D COG: COG3451; Pfam: PF03135; InterPro: IPR004346; cag pathogenicity island protein E VirB4 family protein 860285..863236 Helicobacter pylori 83 12365663 YP_005785441.1 CDS HMPREF0462_0874 NC_017375.1 863238 864044 D cag pathogenicity island protein 863238..864044 Helicobacter pylori 83 12365664 YP_005785442.1 CDS HMPREF0462_0875 NC_017375.1 864099 864530 D cag pathogenicity island protein 864099..864530 Helicobacter pylori 83 12365665 YP_005785443.1 CDS HMPREF0462_0876 NC_017375.1 864532 865644 D cag pathogenicity island protein 864532..865644 Helicobacter pylori 83 12365666 YP_005785444.1 CDS HMPREF0462_0877 NC_017375.1 865655 866800 D cag pathogenicity island protein 865655..866800 Helicobacter pylori 83 12365667 YP_005785445.1 CDS HMPREF0462_0878 NC_017375.1 866797 867510 D cag pathogenicity island protein 866797..867510 Helicobacter pylori 83 12365668 YP_005785446.1 CDS HMPREF0462_0879 NC_017375.1 867593 868513 R cag pathogenicity island protein complement(867593..868513) Helicobacter pylori 83 12365669 YP_005785447.1 CDS HMPREF0462_0880 NC_017375.1 868528 869658 R cag pathogenicity island protein complement(868528..869658) Helicobacter pylori 83 12365670 YP_005785448.1 CDS HMPREF0462_0881 NC_017375.1 870082 870426 D cag pathogenicity island protein 870082..870426 Helicobacter pylori 83 12365671 YP_005785449.1 CDS HMPREF0462_0882 NC_017375.1 871076 871231 R hypothetical protein complement(871076..871231) Helicobacter pylori 83 12365672 YP_005785450.1 CDS HMPREF0462_0883 NC_017375.1 871287 871667 R cag pathogenicity island protein complement(871287..871667) Helicobacter pylori 83 12365673 YP_005785451.1 CDS HMPREF0462_0884 NC_017375.1 872007 872138 R hypothetical protein complement(872007..872138) Helicobacter pylori 83 12365674 YP_005785452.1 CDS HMPREF0462_0885 NC_017375.1 872174 872299 D hypothetical protein 872174..872299 Helicobacter pylori 83 12365675 YP_005785453.1 CDS HMPREF0462_0886 NC_017375.1 872478 873077 D CAG pathogenicity island protein 13 872478..873077 Helicobacter pylori 83 12365676 YP_005785454.1 CDS HMPREF0462_0887 NC_017375.1 873279 874121 R CAG pathogenicity island protein 12 complement(873279..874121) Helicobacter pylori 83 12365677 YP_005785455.1 CDS HMPREF0462_0888 NC_017375.1 874137 874784 R cag pathogenicity island protein complement(874137..874784) Helicobacter pylori 83 12365678 YP_005785456.1 CDS HMPREF0462_0889 NC_017375.1 875058 875816 D COG: COG3736; Pfam: PF04335; InterPro: IPR007430; cag pathogenicity island protein 875058..875816 Helicobacter pylori 83 12365679 YP_005785457.1 CDS HMPREF0462_0890 NC_017375.1 875821 877428 D cag pathogenicity island protein 875821..877428 Helicobacter pylori 83 12365680 YP_005785458.1 CDS HMPREF0462_0891 NC_017375.1 877481 879046 D COG: COG3504; Pfam: PF03524; InterPro: IPR010258; cag pathogenicity island protein 877481..879046 Helicobacter pylori 83 12365681 YP_005785459.1 CDS HMPREF0462_0892 NC_017375.1 879061 880947 D Pfam: PF07337; InterPro: IPR010853; hypothetical protein 879061..880947 Helicobacter pylori 83 12365682 YP_005785460.1 CDS HMPREF0462_0893 NC_017375.1 880977 884453 D COG: COG2948; Pfam: PF07337,PF03743; InterPro: IPR010853; DC-EC Repeat superfamily protein 880977..884453 Helicobacter pylori 83 12365683 YP_005785461.1 CDS HMPREF0462_0894 NC_017375.1 884443 884577 D hypothetical protein 884443..884577 Helicobacter pylori 83 12365684 YP_005785462.1 CDS HMPREF0462_0895 NC_017375.1 884590 885189 D Pfam: PF09053; InterPro: IPR015139; cag pathogenicity island protein 884590..885189 Helicobacter pylori 83 12365685 YP_005785463.1 CDS HMPREF0462_0896 NC_017375.1 885179 886186 D COG: COG0630; Pfam: PF00437; InterPro: IPR001482; P-type DNA transfer ATPase VirB11 885179..886186 Helicobacter pylori 83 12365686 YP_005785464.1 CDS HMPREF0462_0897 NC_017375.1 886195 888441 D COG: COG3505; Pfam: PF02534; InterPro: IPR003688; cag pathogenicity island protein 886195..888441 Helicobacter pylori 83 12365687 YP_005785465.1 CDS HMPREF0462_0898 NC_017375.1 888749 889258 R cag pathogenicity island protein complement(888749..889258) Helicobacter pylori 83 12365688 YP_005785466.1 CDS HMPREF0462_0899 NC_017375.1 889268 890713 R cag pathogenicity island protein complement(889268..890713) Helicobacter pylori 83 12365689 YP_005785467.1 CDS HMPREF0462_0900 NC_017375.1 890729 890926 R cag pathogenicity island protein (cage, cag2) complement(890729..890926) Helicobacter pylori 83 12365690 YP_005785468.1 CDS HMPREF0462_0901 NC_017375.1 890942 891289 R cag pathogenicity island protein complement(890942..891289) Helicobacter pylori 83 12365691 YP_005785469.1 CDS HMPREF0462_0902 NC_017375.1 891400 892293 D Pfam: PF08238; InterPro: IPR011990; Sel1 repeat superfamily protein 891400..892293 Helicobacter pylori 83 12365692 YP_005785470.1 CDS HMPREF0462_0903 NC_017375.1 892337 893329 R COG: COG3034; hypothetical protein complement(892337..893329) Helicobacter pylori 83 12365693 YP_005785471.1 CDS era NC_017375.1 893326 894231 R COG: COG1159; Pfam: PF01926,PF07650; InterPro: IPR005662; GTP-binding protein Era complement(893326..894231) Helicobacter pylori 83 12365694 YP_005785472.1 CDS hslU NC_017375.1 894231 895562 R COG: COG1220; Pfam: PF07724; InterPro: IPR004491; ATP-dependent hsl protease ATP-binding subunit HslU complement(894231..895562) Helicobacter pylori 83 12365695 YP_005785473.1 CDS hslV NC_017375.1 895562 896104 R COG: COG5405; Pfam: PF00227; InterPro: IPR001353; ATP-dependent protease HslVU complement(895562..896104) Helicobacter pylori 83 12365696 YP_005785474.1 CDS rplI NC_017375.1 896108 896557 R COG: COG0359; Pfam: PF01281,PF03948; InterPro: IPR000244; 50S ribosomal protein L9 complement(896108..896557) Helicobacter pylori 83 12365697 YP_005785475.1 CDS HMPREF0462_0908 NC_017375.1 896620 898602 R COG: COG1479; Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein complement(896620..898602) Helicobacter pylori 83 12365698 YP_005785476.1 CDS glnA NC_017375.1 898832 900277 D COG: COG0174; Pfam: PF03951,PF00120; InterPro: IPR004809; glutamine synthetase 898832..900277 Helicobacter pylori 83 12365699 YP_005785477.1 CDS HMPREF0462_0910 NC_017375.1 900305 900472 R hypothetical protein complement(900305..900472) Helicobacter pylori 83 12365700 YP_005785478.1 CDS lpp NC_017375.1 900576 900743 R urease-enhancing factor complement(900576..900743) Helicobacter pylori 83 12365701 YP_005785479.1 CDS dapB NC_017375.1 901020 901784 R COG: COG0289; Pfam: PF01113,PF05173; InterPro: IPR011770; dihydrodipicolinate reductase complement(901020..901784) Helicobacter pylori 83 12365702 YP_005785480.1 CDS glcD NC_017375.1 901807 903186 R COG: COG0277; Pfam: PF01565,PF02913; InterPro: IPR004490; glycolate oxidase complement(901807..903186) Helicobacter pylori 83 12365703 YP_005785481.1 CDS HMPREF0462_0914 NC_017375.1 903188 904513 R plasminogen-binding protein PgbA complement(903188..904513) Helicobacter pylori 83 12365704 YP_005785482.1 CDS nudT14 NC_017375.1 904516 905154 R COG: COG0494; Pfam: PF00293; InterPro: IPR000086; UDP-sugar diphosphatase complement(904516..905154) Helicobacter pylori 83 12365705 YP_005785483.1 CDS HMPREF0462_0916 NC_017375.1 905154 906365 R COG: COG0739; Pfam: PF01551; InterPro: IPR002886; M23/M37 family peptidase complement(905154..906365) Helicobacter pylori 83 12365706 YP_005785484.1 CDS HMPREF0462_0917 NC_017375.1 906804 907193 D HrgC 906804..907193 Helicobacter pylori 83 12365707 YP_005785485.1 CDS gyrB NC_017375.1 907289 909610 R COG: COG0187; Pfam: PF02518,PF00204,PF01751,PF00986; InterPro: IPR011557; DNA topoisomerase subunit B complement(907289..909610) Helicobacter pylori 83 12365708 YP_005785486.1 CDS dnaN NC_017375.1 909623 910747 R COG: COG0592; Pfam: PF00712,PF02767,PF02768; InterPro: IPR001001; DNA-directed DNA polymerase III subunit beta complement(909623..910747) Helicobacter pylori 83 12365709 YP_005785487.1 CDS pldA NC_017375.1 910804 911871 R COG: COG2829; Pfam: PF02253; InterPro: IPR003187; phospholipase A complement(910804..911871) Helicobacter pylori 83 12365710 YP_005785488.1 CDS HMPREF0462_0921 NC_017375.1 911886 913214 R COG: COG0733; Pfam: PF00209; InterPro: IPR000175; NSS family amino acid:sodium (Na+) symporter complement(911886..913214) Helicobacter pylori 83 12365711 YP_005785489.1 CDS HMPREF0462_0922 NC_017375.1 913225 914553 R COG: COG0733; Pfam: PF00209; InterPro: IPR000175; NSS family amino acid:sodium (Na+) symporter complement(913225..914553) Helicobacter pylori 83 12365712 YP_005785490.1 CDS HMPREF0462_0923 NC_017375.1 914785 915186 D COG: COG0824; Pfam: PF03061; InterPro: IPR006684; thioesterase 914785..915186 Helicobacter pylori 83 12365713 YP_005785491.1 CDS HMPREF0462_0924 NC_017375.1 915176 915436 D hypothetical protein 915176..915436 Helicobacter pylori 83 12365714 YP_005785492.1 CDS murD NC_017375.1 915433 916701 R COG: COG0771; Pfam: PF08245,PF02875; InterPro: IPR005762; UDP-N-acetylmuramoyl-L-alanine-D-glutamate ligase complement(915433..916701) Helicobacter pylori 83 12365715 YP_005785493.1 CDS mraY NC_017375.1 916703 917785 R COG: COG0472; Pfam: PF00953; InterPro: IPR003524; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(916703..917785) Helicobacter pylori 83 12365716 YP_005785494.1 CDS hpaA NC_017375.1 917891 918739 D Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin 917891..918739 Helicobacter pylori 83 12365717 YP_005785495.1 CDS rpmB NC_017375.1 918832 919020 D COG: COG0227; Pfam: PF00830; InterPro: IPR001383; 50S ribosomal protein L28 918832..919020 Helicobacter pylori 83 12365718 YP_005785496.1 CDS HMPREF0462_0929 NC_017375.1 919164 920306 D COG: COG1226; Pfam: PF02254,PF02080; InterPro: IPR016040; potassium channel protein 919164..920306 Helicobacter pylori 83 12365719 YP_005785497.1 CDS HMPREF0462_0930 NC_017375.1 920338 920703 R hypothetical protein complement(920338..920703) Helicobacter pylori 83 12365720 YP_005785498.1 CDS HMPREF0462_0931 NC_017375.1 920716 923151 R hypothetical protein complement(920716..923151) Helicobacter pylori 83 12365721 YP_005785499.1 CDS ruvA NC_017375.1 923203 923754 R COG: COG0632; Pfam: PF01330,PF07499; InterPro: IPR000085; crossover junction ATP-dependent DNA helicase RuvA complement(923203..923754) Helicobacter pylori 83 12365722 YP_005785500.1 CDS HMPREF0462_0933 NC_017375.1 923781 925625 R hypothetical protein complement(923781..925625) Helicobacter pylori 83 12365723 YP_005785501.1 CDS mviN NC_017375.1 925718 927178 D COG: COG0728; Pfam: PF03023; InterPro: IPR004268; integral membrane protein MviN 925718..927178 Helicobacter pylori 83 12365724 YP_005785502.1 CDS cysS NC_017375.1 927179 928576 D COG: COG0215; Pfam: PF01406; InterPro: IPR002308; cysteine--tRNA ligase 927179..928576 Helicobacter pylori 83 12365725 YP_005785503.1 CDS HMPREF0462_0936 NC_017375.1 928800 932690 D COG: COG5651; Pfam: PF02691,PF03797; InterPro: IPR003842; vacuolating cytotoxin 928800..932690 Helicobacter pylori 83 12365726 YP_005785504.1 CDS phnC NC_017375.1 932751 933518 R COG: COG1120; Pfam: PF00005; InterPro: IPR003593; phosphonate ABC superfamily ATP binding cassette transporter, ABC protein complement(932751..933518) Helicobacter pylori 83 12365727 YP_005785505.1 CDS fecD NC_017375.1 933518 934234 R COG: COG0609; Pfam: PF01032; InterPro: IPR000522; iron(III) ABC superfamily ATP binding cassette transporter, membrane protein complement(933518..934234) Helicobacter pylori 83 12365728 YP_005785506.1 CDS fecD2 NC_017375.1 934234 934497 R Pfam: PF01032; InterPro: IPR000522; iron(III) ABC superfamily ATP binding cassette transporter, membrane protein complement(934234..934497) Helicobacter pylori 83 12365729 YP_005785507.1 CDS HMPREF0462_0940 NC_017375.1 934490 935332 R COG: COG1028; Pfam: PF00106; InterPro: IPR016040; short chain dehydrogenase complement(934490..935332) Helicobacter pylori 83 12365730 YP_005785508.1 CDS HMPREF0462_0941 NC_017375.1 935472 935996 D COG: COG1607; Pfam: PF03061; InterPro: IPR006683; VdlD family protein 935472..935996 Helicobacter pylori 83 12365731 YP_005785509.1 CDS HMPREF0462_0942 NC_017375.1 936342 936653 R hypothetical protein complement(936342..936653) Helicobacter pylori 83 12365732 YP_005785510.1 CDS HMPREF0462_0943 NC_017375.1 936822 937106 R COG: COG3309; Pfam: PF04605; InterPro: IPR007683; virulence-associated protein D complement(936822..937106) Helicobacter pylori 83 12365733 YP_005785511.1 CDS HMPREF0462_0944 NC_017375.1 937087 937479 R hypothetical protein complement(937087..937479) Helicobacter pylori 83 12365734 YP_005785512.1 CDS HMPREF0462_0946 NC_017375.1 940927 941448 D hypothetical protein 940927..941448 Helicobacter pylori 83 12365737 YP_005785513.1 CDS hypD NC_017375.1 941399 942511 R COG: COG0409; Pfam: PF01924; InterPro: IPR002780; hydrogenase expression/formation protein HypD complement(941399..942511) Helicobacter pylori 83 12365738 YP_005785514.1 CDS hypC NC_017375.1 942539 942775 R COG: COG0298; Pfam: PF01455; InterPro: IPR001109; hydrogenase assembly chaperone HypC/HupF complement(942539..942775) Helicobacter pylori 83 12365739 YP_005785515.1 CDS hypB NC_017375.1 942775 943503 R COG: COG0378; Pfam: PF02492; InterPro: IPR004392; hydrogenase nickel incorporation protein HypB complement(942775..943503) Helicobacter pylori 83 12365740 YP_005785516.1 CDS HMPREF0462_0950 NC_017375.1 943752 944051 R COG: COG1917; hypothetical protein complement(943752..944051) Helicobacter pylori 83 12365741 YP_005785517.1 CDS ackA NC_017375.1 944062 944418 R COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase complement(944062..944418) Helicobacter pylori 83 12365742 YP_005785518.1 CDS ackA2 NC_017375.1 944381 944641 R COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase complement(944381..944641) Helicobacter pylori 83 12365743 YP_005785519.1 CDS ackA3 NC_017375.1 944943 945320 R COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase complement(944943..945320) Helicobacter pylori 83 12365744 YP_005785520.1 CDS pta NC_017375.1 945338 946006 R COG: COG0280; Pfam: PF01515; InterPro: IPR002505; phosphate acetyltransferase complement(945338..946006) Helicobacter pylori 83 12365745 YP_005785521.1 CDS pta2 NC_017375.1 945999 946526 R Pfam: PF01515; InterPro: IPR002505; phosphate acetyltransferase complement(945999..946526) Helicobacter pylori 83 12365746 YP_005785522.1 CDS pta3 NC_017375.1 946742 946945 R phosphate acetyltransferase complement(946742..946945) Helicobacter pylori 83 12365747 YP_005785523.1 CDS HMPREF0462_0957 NC_017375.1 947152 948726 D Pfam: PF02120; hypothetical protein 947152..948726 Helicobacter pylori 83 12365748 YP_005785524.1 CDS flgD NC_017375.1 948777 949736 D COG: COG1843; Pfam: PF03963; InterPro: IPR005648; hook assembly protein 948777..949736 Helicobacter pylori 83 12365749 YP_005785525.1 CDS flgE2 NC_017375.1 949733 951550 D COG: COG1749; Pfam: PF00460,PF07559,PF06429; InterPro: IPR011491; flagellar hook 949733..951550 Helicobacter pylori 83 12365750 YP_005785526.1 CDS HMPREF0462_0960 NC_017375.1 951602 952225 D restriction endonuclease 951602..952225 Helicobacter pylori 83 12365751 YP_005785527.1 CDS hinDIIM NC_017375.1 952194 953354 D COG: COG0827; Pfam: PF07669; adenine specific DNA methyltransferase 952194..953354 Helicobacter pylori 83 12365752 YP_005785528.1 CDS HMPREF0462_0962 NC_017375.1 953348 955378 D COG: COG0210; Pfam: PF00580; InterPro: IPR000212; rep helicase, single-stranded DNA-dependent ATPase 953348..955378 Helicobacter pylori 83 12365753 YP_005785529.1 CDS HMPREF0462_0963 NC_017375.1 955846 956001 R hypothetical protein complement(955846..956001) Helicobacter pylori 83 12365754 YP_005785530.1 CDS HMPREF0462_0964 NC_017375.1 956189 957742 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 956189..957742 Helicobacter pylori 83 12365755 YP_005785531.1 CDS HMPREF0462_0965 NC_017375.1 957764 959353 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 957764..959353 Helicobacter pylori 83 12365756 YP_005785532.1 CDS HMPREF0462_0966 NC_017375.1 959622 959804 R SsrA-binding protein complement(959622..959804) Helicobacter pylori 83 12365757 YP_005785533.1 CDS hofG NC_017375.1 959886 961430 R Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein complement(959886..961430) Helicobacter pylori 83 12365758 YP_005785534.1 CDS frpB2 NC_017375.1 961677 964118 R COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531; iron-regulated outer membrane protein complement(961677..964118) Helicobacter pylori 83 12365759 YP_005785535.1 CDS HMPREF0462_0969 NC_017375.1 964295 964726 R hypothetical protein complement(964295..964726) Helicobacter pylori 83 12365760 YP_005785536.1 CDS carB NC_017375.1 964726 967983 R COG: COG0458; Pfam: PF00289,PF02786,PF02787,PF02142; InterPro: IPR006275; carbamoyl-phosphate synthase large subunit complement(964726..967983) Helicobacter pylori 83 12365761 YP_005785537.1 CDS HMPREF0462_0971 NC_017375.1 968079 968771 R COG: COG0670; Pfam: PF01027; InterPro: IPR006214; TEGT family testis enhanced gene transfer transporter complement(968079..968771) Helicobacter pylori 83 12365762 YP_005785538.1 CDS gap2 NC_017375.1 968907 969911 D COG: COG0057; Pfam: PF00044,PF02800; InterPro: IPR000173; glyceraldehyde-3-phosphate dehydrogenase 968907..969911 Helicobacter pylori 83 12365763 YP_005785539.1 CDS HMPREF0462_0973 NC_017375.1 969990 977180 D COG: COG5651; Pfam: PF03077,PF02691,PF03797; InterPro: IPR005546; vacuolating cytotoxin (VacA) family protein 969990..977180 Helicobacter pylori 83 12365764 YP_005785540.1 CDS HMPREF0462_0974 NC_017375.1 977232 978023 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 977232..978023 Helicobacter pylori 83 12365765 YP_005785541.1 CDS HMPREF0462_0975 NC_017375.1 977998 978339 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 977998..978339 Helicobacter pylori 83 12365766 YP_005785542.1 CDS HMPREF0462_0976 NC_017375.1 978397 978603 R COG: COG1942; Pfam: PF01361; InterPro: IPR004370; 4-oxalocrotonate tautomerase complement(978397..978603) Helicobacter pylori 83 12365767 YP_005785543.1 CDS recR NC_017375.1 978749 979330 D COG: COG0353; Pfam: PF02132; InterPro: IPR000093; recombination protein R 978749..979330 Helicobacter pylori 83 12365768 YP_005785544.1 CDS truD NC_017375.1 979327 980472 D COG: COG0585; Pfam: PF01142; InterPro: IPR001656; tRNA pseudouridine synthase D 979327..980472 Helicobacter pylori 83 12365769 YP_005785545.1 CDS htpX NC_017375.1 980441 981391 D COG: COG0501; Pfam: PF01435; InterPro: IPR001915; heat shock protein HtpX 980441..981391 Helicobacter pylori 83 12365770 YP_005785546.1 CDS folE NC_017375.1 981392 981934 D COG: COG0302; Pfam: PF01227; InterPro: IPR001474; GTP cyclohydrolase I 981392..981934 Helicobacter pylori 83 12365771 YP_005785547.1 CDS ispA NC_017375.1 981950 982861 D COG: COG0142; Pfam: PF00348; InterPro: IPR008949; geranyltranstransferase 981950..982861 Helicobacter pylori 83 12365772 YP_005785548.1 CDS surE NC_017375.1 982858 983661 D COG: COG0496; Pfam: PF01975; InterPro: IPR002828; 5'/3'-nucleotidase SurE 982858..983661 Helicobacter pylori 83 12365773 YP_005785549.1 CDS HMPREF0462_0983 NC_017375.1 983658 984317 D hypothetical protein 983658..984317 Helicobacter pylori 83 12365774 YP_005785550.1 CDS ptpS NC_017375.1 984321 984923 D COG: COG0720; 6-pyruvoyl-tetrahydropterin synthase 984321..984923 Helicobacter pylori 83 12365775 YP_005785551.1 CDS HMPREF0462_0985 NC_017375.1 984920 985675 D COG: COG0602; Pfam: PF04055; radical SAM domain-containing protein 984920..985675 Helicobacter pylori 83 12365776 YP_005785552.1 CDS HMPREF0462_0986 NC_017375.1 985686 986171 D COG: COG0454; Pfam: PF00583; InterPro: IPR016181; GNAT family acetyltransferase 985686..986171 Helicobacter pylori 83 12365777 YP_005785553.1 CDS HMPREF0462_0987 NC_017375.1 986390 988375 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 986390..988375 Helicobacter pylori 83 12365778 YP_005785554.1 CDS proP NC_017375.1 988513 989682 R COG: COG0477; Pfam: PF07690; InterPro: IPR011701; proline/betaine transporter complement(988513..989682) Helicobacter pylori 83 12365779 YP_005785555.1 CDS HMPREF0462_0989 NC_017375.1 990156 991484 R COG: COG1479; Pfam: PF03235; InterPro: IPR004919; hypothetical protein complement(990156..991484) Helicobacter pylori 83 12365780 YP_005785556.1 CDS HMPREF0462_0990 NC_017375.1 991462 991851 R COG: COG1479; Pfam: PF03235; hypothetical protein complement(991462..991851) Helicobacter pylori 83 12365781 YP_005785557.1 CDS tcyB NC_017375.1 991906 992619 R COG: COG0765; Pfam: PF00528; InterPro: IPR000515; L-cystine ABC superfamily ATP binding cassette transporter, membrane protein complement(991906..992619) Helicobacter pylori 83 12365782 YP_005785558.1 CDS tcyA NC_017375.1 992603 993379 R COG: COG0834; Pfam: PF00497; InterPro: IPR001638; L-cystine ABC superfamily ATP binding cassette transporter, binding protein complement(992603..993379) Helicobacter pylori 83 12365783 YP_005785559.1 CDS alr NC_017375.1 993451 994584 R COG: COG0787; Pfam: PF01168,PF00842; InterPro: IPR000821; alanine racemase complement(993451..994584) Helicobacter pylori 83 12365784 YP_005785560.1 CDS agcS NC_017375.1 994591 995943 R COG: COG1115; Pfam: PF01235; InterPro: IPR001463; AGCS family alanine/glycine:sodium (Na+) symporter complement(994591..995943) Helicobacter pylori 83 12365785 YP_005785561.1 CDS dadA NC_017375.1 995984 997216 R COG: COG0665; Pfam: PF01266; InterPro: IPR006076; D-amino-acid dehydrogenase complement(995984..997216) Helicobacter pylori 83 12365786 YP_005785562.1 CDS HMPREF0462_0996 NC_017375.1 997238 997615 R COG: COG0251; Pfam: PF01042; InterPro: IPR013813; endoribonuclease L-PSP complement(997238..997615) Helicobacter pylori 83 12365787 YP_005785563.1 CDS HMPREF0462_0997 NC_017375.1 998040 998339 D Trl family protein 998040..998339 Helicobacter pylori 83 12365789 YP_005785564.1 CDS HMPREF0462_0998 NC_017375.1 998898 1000388 D COG: COG1757; Pfam: PF03553; InterPro: IPR004770; NhaC family sodium:proton (Na+:H+) antiporter 998898..1000388 Helicobacter pylori 83 12365793 YP_005785565.1 CDS HMPREF0462_0999 NC_017375.1 1000705 1001064 D hypothetical protein 1000705..1001064 Helicobacter pylori 83 12365794 YP_005785566.1 CDS HMPREF0462_1000 NC_017375.1 1001191 1001313 D hypothetical protein 1001191..1001313 Helicobacter pylori 83 12365795 YP_005785567.1 CDS ilvE NC_017375.1 1001353 1001499 D branched-chain amino acid aminotransferase I 1001353..1001499 Helicobacter pylori 83 12365796 YP_005785568.1 CDS HMPREF0462_1002 NC_017375.1 1001625 1002638 R hypothetical protein complement(1001625..1002638) Helicobacter pylori 83 12365797 YP_005785569.1 CDS HMPREF0462_1003 NC_017375.1 1002648 1003100 R COG: COG1576; Pfam: PF02590; InterPro: IPR003742; SPOUT methyltransferase superfamily protein complement(1002648..1003100) Helicobacter pylori 83 12365798 YP_005785570.1 CDS accD NC_017375.1 1003114 1003983 R COG: COG0777; Pfam: PF01039; InterPro: IPR000438; acetyl-coA carboxylase carboxyl transferase subunit beta complement(1003114..1003983) Helicobacter pylori 83 12365799 YP_005785571.1 CDS HMPREF0462_1005 NC_017375.1 1004064 1004678 D hypothetical protein 1004064..1004678 Helicobacter pylori 83 12365800 YP_005785572.1 CDS HMPREF0462_1006 NC_017375.1 1004688 1005344 D COG: COG1546; Pfam: PF02464; InterPro: IPR008136; hypothetical protein 1004688..1005344 Helicobacter pylori 83 12365801 YP_005785573.1 CDS HMPREF0462_1007 NC_017375.1 1005346 1005912 R hypothetical protein complement(1005346..1005912) Helicobacter pylori 83 12365802 YP_005785574.1 CDS HMPREF0462_1008 NC_017375.1 1005977 1006609 R Pfam: PF00881; InterPro: IPR000415; oxygen-insensitive NADPH nitroreductase complement(1005977..1006609) Helicobacter pylori 83 12365803 YP_005785575.1 CDS lgt NC_017375.1 1006606 1007460 R COG: COG0682; Pfam: PF01790; InterPro: IPR001640; prolipoprotein diacylglyceryl transferase complement(1006606..1007460) Helicobacter pylori 83 12365804 YP_005785576.1 CDS rluA NC_017375.1 1007470 1008198 R COG: COG0564; Pfam: PF00849; InterPro: IPR006145; RNA pseudouridine synthase complement(1007470..1008198) Helicobacter pylori 83 12365805 YP_005785577.1 CDS kdtA NC_017375.1 1008207 1009394 R COG: COG1519; Pfam: PF04413; InterPro: IPR007507; 3-deoxy-D-manno-octulosonic-acid transferase complement(1008207..1009394) Helicobacter pylori 83 12365806 YP_005785578.1 CDS HMPREF0462_1012 NC_017375.1 1009395 1010159 R COG: COG1579; Pfam: PF02591; InterPro: IPR003743; hypothetical protein complement(1009395..1010159) Helicobacter pylori 83 12365807 YP_005785579.1 CDS HMPREF0462_1013 NC_017375.1 1010169 1010900 R COG: COG0327; Pfam: PF01784; InterPro: IPR002678; hypothetical protein complement(1010169..1010900) Helicobacter pylori 83 12365808 YP_005785580.1 CDS glyQ NC_017375.1 1010902 1011798 R COG: COG0752; Pfam: PF02091; InterPro: IPR002310; glycyl-tRNA synthetase subunit alpha complement(1010902..1011798) Helicobacter pylori 83 12365809 YP_005785581.1 CDS gpsA NC_017375.1 1011813 1012787 R COG: COG0240; Pfam: PF01210,PF07479; InterPro: IPR006168; glycerol-3-phosphate dehydrogenase complement(1011813..1012787) Helicobacter pylori 83 12365810 YP_005785582.1 CDS HMPREF0462_1016 NC_017375.1 1013515 1013730 R hypothetical protein complement(1013515..1013730) Helicobacter pylori 83 12365811 YP_005785583.1 CDS HMPREF0462_1017 NC_017375.1 1013764 1013937 R hypothetical protein complement(1013764..1013937) Helicobacter pylori 83 12365812 YP_005785584.1 CDS HMPREF0462_1018 NC_017375.1 1014124 1014918 R hypothetical protein complement(1014124..1014918) Helicobacter pylori 83 12365813 YP_005785585.1 CDS HMPREF0462_1019 NC_017375.1 1014911 1015741 R COG: COG0699; hypothetical protein complement(1014911..1015741) Helicobacter pylori 83 12365814 YP_005785586.1 CDS HMPREF0462_1020 NC_017375.1 1015860 1015991 R hypothetical protein complement(1015860..1015991) Helicobacter pylori 83 12365815 YP_005785587.1 CDS HMPREF0462_1021 NC_017375.1 1016008 1016151 D hypothetical protein 1016008..1016151 Helicobacter pylori 83 12365816 YP_005785588.1 CDS vapD NC_017375.1 1016341 1016628 R COG: COG3309; Pfam: PF04605; InterPro: IPR007683; virulence-associated protein 2 complement(1016341..1016628) Helicobacter pylori 83 12365817 YP_005785589.1 CDS HMPREF0462_1023 NC_017375.1 1016698 1016979 R hypothetical protein complement(1016698..1016979) Helicobacter pylori 83 12365818 YP_005785590.1 CDS czcA NC_017375.1 1016990 1020049 R COG: COG3696; Pfam: PF00873; InterPro: IPR004763; CzcA family heavy metal efflux pump complement(1016990..1020049) Helicobacter pylori 83 12365819 YP_005785591.1 CDS nccB NC_017375.1 1020049 1021104 R COG: COG0845; nickel-cobalt-cadmium resistance protein complement(1020049..1021104) Helicobacter pylori 83 12365820 YP_005785592.1 CDS HMPREF0462_1026 NC_017375.1 1021125 1022444 R Pfam: PF02321; InterPro: IPR003423; nickel cobalt outer membrane efflux protein complement(1021125..1022444) Helicobacter pylori 83 12365821 YP_005785593.1 CDS glyS NC_017375.1 1022416 1024518 R COG: COG0751; Pfam: PF02092; InterPro: IPR015944; glycyl-tRNA synthetase subunit beta complement(1022416..1024518) Helicobacter pylori 83 12365822 YP_005785594.1 CDS HMPREF0462_1028 NC_017375.1 1024631 1025698 D hypothetical protein 1024631..1025698 Helicobacter pylori 83 12365823 YP_005785595.1 CDS gpmI NC_017375.1 1025711 1027186 D COG: COG0696; Pfam: PF06415,PF01676; InterPro: IPR005995; phosphoglycerate mutase 1025711..1027186 Helicobacter pylori 83 12365824 YP_005785596.1 CDS gatC NC_017375.1 1027201 1027482 D COG: COG0721; Pfam: PF02686; InterPro: IPR003837; glutamyl-tRNA(Gln) amidotransferase subunit C 1027201..1027482 Helicobacter pylori 83 12365825 YP_005785597.1 CDS bioA NC_017375.1 1027555 1028865 R COG: COG0161; Pfam: PF00202; InterPro: IPR005815; adenosylmethionine-8-amino-7-oxononanoate transaminase complement(1027555..1028865) Helicobacter pylori 83 12365826 YP_005785598.1 CDS HMPREF0462_1032 NC_017375.1 1028994 1030457 D COG: COG0760; peptidyl-prolyl cis-trans isomerase 1028994..1030457 Helicobacter pylori 83 12365827 YP_005785599.1 CDS ftsA NC_017375.1 1030457 1031953 D COG: COG0849; Pfam: PF02491; InterPro: IPR003494; cell division protein FtsA 1030457..1031953 Helicobacter pylori 83 12365828 YP_005785600.1 CDS ftsZ NC_017375.1 1032088 1033245 D COG: COG0206; Pfam: PF00091,PF03953; InterPro: IPR000158; cell division protein FtsZ 1032088..1033245 Helicobacter pylori 83 12365829 YP_005785601.1 CDS HMPREF0462_1035 NC_017375.1 1034126 1034950 R COG: COG0668; Pfam: PF00924; InterPro: IPR006685; MscS family small conductance mechanosenstive ion channel complement(1034126..1034950) Helicobacter pylori 83 12365830 YP_005785602.1 CDS HMPREF0462_1036 NC_017375.1 1034943 1035143 R hypothetical protein complement(1034943..1035143) Helicobacter pylori 83 12365831 YP_005785603.1 CDS HMPREF0462_1037 NC_017375.1 1035167 1035316 R hypothetical protein complement(1035167..1035316) Helicobacter pylori 83 12365832 YP_005785604.1 CDS HMPREF0462_1038 NC_017375.1 1038815 1038979 R hypothetical protein complement(1038815..1038979) Helicobacter pylori 83 12365836 YP_005785605.1 CDS HMPREF0462_1039 NC_017375.1 1039643 1041340 D Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 1039643..1041340 Helicobacter pylori 83 12365837 YP_005785606.1 CDS HMPREF0462_1040 NC_017375.1 1041381 1041770 D COG: COG0608; Pfam: PF01368; hypothetical protein 1041381..1041770 Helicobacter pylori 83 12365838 YP_005785607.1 CDS HMPREF0462_1041 NC_017375.1 1041822 1042031 D COG: COG0608; hypothetical protein 1041822..1042031 Helicobacter pylori 83 12365839 YP_005785608.1 CDS HMPREF0462_1042 NC_017375.1 1042022 1042633 D COG: COG0608; hypothetical protein 1042022..1042633 Helicobacter pylori 83 12365840 YP_005785609.1 CDS HMPREF0462_1043 NC_017375.1 1042677 1043159 D hypothetical protein 1042677..1043159 Helicobacter pylori 83 12365841 YP_005785610.1 CDS HMPREF0462_1044 NC_017375.1 1043555 1043914 D hypothetical protein 1043555..1043914 Helicobacter pylori 83 12365842 YP_005785611.1 CDS HMPREF0462_1045 NC_017375.1 1044006 1044530 D hypothetical protein 1044006..1044530 Helicobacter pylori 83 12365843 YP_005785612.1 CDS HMPREF0462_1046 NC_017375.1 1044635 1045555 D hypothetical protein 1044635..1045555 Helicobacter pylori 83 12365844 YP_005785613.1 CDS speA NC_017375.1 1045681 1047528 R COG: COG1166; Pfam: PF02784,PF00278; InterPro: IPR002985; arginine 2-monooxygenase complement(1045681..1047528) Helicobacter pylori 83 12365845 YP_005785614.1 CDS capJ NC_017375.1 1047543 1048712 R COG: COG0438; Pfam: PF00534; InterPro: IPR001296; type 1 capsular polysaccharide biosynthesis protein J complement(1047543..1048712) Helicobacter pylori 83 12365846 YP_005785615.1 CDS HMPREF0462_1049 NC_017375.1 1048717 1049145 R COG: COG2050; Pfam: PF03061; InterPro: IPR006683; hypothetical protein complement(1048717..1049145) Helicobacter pylori 83 12365847 YP_005785616.1 CDS HMPREF0462_1050 NC_017375.1 1049162 1049947 R COG: COG0500; Pfam: PF08003; InterPro: IPR010017; S-adenosyl methionine-dependent methyltransferase complement(1049162..1049947) Helicobacter pylori 83 12365848 YP_005785617.1 CDS HMPREF0462_1051 NC_017375.1 1049951 1050958 R hypothetical protein complement(1049951..1050958) Helicobacter pylori 83 12365849 YP_005785618.1 CDS metG NC_017375.1 1050959 1052911 R COG: COG0143; Pfam: PF09334,PF01588; InterPro: IPR002304; methionine--tRNA ligase complement(1050959..1052911) Helicobacter pylori 83 12365850 YP_005785619.1 CDS cfa NC_017375.1 1053080 1054249 D COG: COG2230; Pfam: PF02353; InterPro: IPR003333; cyclopropane-fatty-acyl-phospholipid synthase 1053080..1054249 Helicobacter pylori 83 12365851 YP_005785620.1 CDS HMPREF0462_1054 NC_017375.1 1054252 1056135 R COG: COG0668; Pfam: PF00924; InterPro: IPR006685; hypothetical protein complement(1054252..1056135) Helicobacter pylori 83 12365852 YP_005785621.1 CDS HMPREF0462_1055 NC_017375.1 1057310 1058059 R Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin family protein complement(1057310..1058059) Helicobacter pylori 83 12365857 YP_005785622.1 CDS guaA NC_017375.1 1058138 1059664 R COG: COG0519; Pfam: PF00117,PF03054,PF00958; InterPro: IPR001674; GMP synthase complement(1058138..1059664) Helicobacter pylori 83 12365858 YP_005785623.1 CDS HMPREF0462_1057 NC_017375.1 1059675 1060163 R hypothetical protein complement(1059675..1060163) Helicobacter pylori 83 12365859 YP_005785624.1 CDS torA NC_017375.1 1060324 1062099 R COG: COG0243; Pfam: PF00384,PF01568; InterPro: IPR006656; trimethylamine-N-oxide reductase complement(1060324..1062099) Helicobacter pylori 83 12365860 YP_005785625.1 CDS bisC NC_017375.1 1062179 1062385 R biotin sulfoxide reductase complement(1062179..1062385) Helicobacter pylori 83 12365861 YP_005785626.1 CDS bisC2 NC_017375.1 1062382 1062513 R biotin sulfoxide reductase complement(1062382..1062513) Helicobacter pylori 83 12365862 YP_005785627.1 CDS bisC3 NC_017375.1 1062510 1062707 R biotin sulfoxide reductase complement(1062510..1062707) Helicobacter pylori 83 12365863 YP_005785628.1 CDS HMPREF0462_1062 NC_017375.1 1062813 1063403 R hypothetical protein complement(1062813..1063403) Helicobacter pylori 83 12365864 YP_005785629.1 CDS HMPREF0462_1063 NC_017375.1 1063429 1064751 R COG: COG0520; Pfam: PF00266; InterPro: IPR000192; aminotransferase complement(1063429..1064751) Helicobacter pylori 83 12365865 YP_005785630.1 CDS HMPREF0462_1064 NC_017375.1 1064770 1065084 R COG: COG0537; Pfam: PF01230; InterPro: IPR011151; HIT family protein complement(1064770..1065084) Helicobacter pylori 83 12365866 YP_005785631.1 CDS pheS NC_017375.1 1065166 1066152 D COG: COG0016; Pfam: PF02912,PF01409; InterPro: IPR004529; phenylalanyl-tRNA synthetase subunit alpha 1065166..1066152 Helicobacter pylori 83 12365867 YP_005785632.1 CDS pheT NC_017375.1 1066152 1068446 D COG: COG0072; Pfam: PF01588,PF03484,PF03147; InterPro: IPR004532; phenylalanyl-tRNA synthetase subunit beta 1066152..1068446 Helicobacter pylori 83 12365868 YP_005785633.1 CDS aroA NC_017375.1 1068462 1069751 D COG: COG0128; Pfam: PF00275; InterPro: IPR006264; 3-phosphoshikimate 1-carboxyvinyltransferase 1068462..1069751 Helicobacter pylori 83 12365869 YP_005785634.1 CDS ispH NC_017375.1 1069741 1070565 D COG: COG0761; Pfam: PF02401; InterPro: IPR003451; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1069741..1070565 Helicobacter pylori 83 12365870 YP_005785635.1 CDS rpsA NC_017375.1 1070686 1072344 D COG: COG0539; Pfam: PF00575; InterPro: IPR000110; 30S ribosomal protein S1 1070686..1072344 Helicobacter pylori 83 12365871 YP_005785636.1 CDS HMPREF0462_1070 NC_017375.1 1072373 1072912 D hypothetical protein 1072373..1072912 Helicobacter pylori 83 12365872 YP_005785637.1 CDS serA NC_017375.1 1072928 1074502 D COG: COG0111; Pfam: PF00389,PF02826,PF01842; InterPro: IPR006236; phosphoglycerate dehydrogenase 1072928..1074502 Helicobacter pylori 83 12365873 YP_005785638.1 CDS HMPREF0462_1072 NC_017375.1 1074512 1076362 D COG: COG0043; Pfam: PF01977; InterPro: IPR002830; SCO4490 family menaquinone biosynthesis decarboxylase 1074512..1076362 Helicobacter pylori 83 12365874 YP_005785639.1 CDS HMPREF0462_1073 NC_017375.1 1076372 1077040 D COG: COG0325; Pfam: PF01168; InterPro: IPR011078; YggS family pyridoxal phosphate enzyme 1076372..1077040 Helicobacter pylori 83 12365875 YP_005785640.1 CDS HMPREF0462_1074 NC_017375.1 1077042 1077800 D COG: COG2908; Pfam: PF00149; Ser/Thr protein phosphatase 1077042..1077800 Helicobacter pylori 83 12365876 YP_005785641.1 CDS cheV3 NC_017375.1 1077804 1078739 D COG: COG0835; Pfam: PF01584,PF00072; InterPro: IPR002545; chemotaxis protein CheV 1077804..1078739 Helicobacter pylori 83 12365877 YP_005785642.1 CDS cheA NC_017375.1 1078797 1081208 D COG: COG0643; Pfam: PF01627,PF02895,PF02518,PF01584,PF00072; InterPro: IPR003594; chemotaxis histidine kinase CheA 1078797..1081208 Helicobacter pylori 83 12365878 YP_005785643.1 CDS cheW NC_017375.1 1081205 1081702 D COG: COG0835; Pfam: PF01584; InterPro: IPR002545; chemotaxis signal transduction protein CheW 1081205..1081702 Helicobacter pylori 83 12365879 YP_005785644.1 CDS tpx NC_017375.1 1081959 1082459 R COG: COG2077; Pfam: PF08534; InterPro: IPR012335; thiol peroxidase complement(1081959..1082459) Helicobacter pylori 83 12365880 YP_005785645.1 CDS sodB NC_017375.1 1082683 1083324 D COG: COG0605; Pfam: PF00081,PF02777; InterPro: IPR001189; superoxide dismutase 1082683..1083324 Helicobacter pylori 83 12365881 YP_005785646.1 CDS HMPREF0462_1080 NC_017375.1 1083376 1084095 D COG: COG0500; Pfam: PF08241; InterPro: IPR005271; S-adenosyl-L-methionine-dependent methyltransferase 1083376..1084095 Helicobacter pylori 83 12365882 YP_005785647.1 CDS priA NC_017375.1 1084129 1085988 R COG: COG1198; Pfam: PF00270,PF00271; InterPro: IPR005259; DNA replication factor Y complement(1084129..1085988) Helicobacter pylori 83 12365883 YP_005785648.1 CDS HMPREF0462_1082 NC_017375.1 1085973 1086209 R hypothetical protein complement(1085973..1086209) Helicobacter pylori 83 12365884 YP_005785649.1 CDS HMPREF0462_1083 NC_017375.1 1086222 1086449 R hypothetical protein complement(1086222..1086449) Helicobacter pylori 83 12365885 YP_005785650.1 CDS HMPREF0462_1084 NC_017375.1 1086631 1087377 D Pfam: PF05036; hypothetical protein 1086631..1087377 Helicobacter pylori 83 12365886 YP_005785651.1 CDS HMPREF0462_1085 NC_017375.1 1087386 1087913 R hypothetical protein complement(1087386..1087913) Helicobacter pylori 83 12365887 YP_005785652.1 CDS yjr117W NC_017375.1 1088081 1089304 D COG: COG0501; Pfam: PF01435; InterPro: IPR001915; zinc-metallo protease 1088081..1089304 Helicobacter pylori 83 12365888 YP_005785653.1 CDS hemK NC_017375.1 1089301 1090131 D COG: COG2890; Pfam: PF05175; InterPro: IPR004556; protoporphyrinogen oxidase 1089301..1090131 Helicobacter pylori 83 12365889 YP_005785654.1 CDS gdhA NC_017375.1 1090197 1091543 D COG: COG0334; Pfam: PF02812,PF00208; InterPro: IPR006095; NADP-specific glutamate dehydrogenase 1090197..1091543 Helicobacter pylori 83 12365890 YP_005785655.1 CDS HMPREF0462_1089 NC_017375.1 1091562 1092935 R InterPro: IPR001503; alpha-1,3/4-fucosyltransferase complement(1091562..1092935) Helicobacter pylori 83 12365891 YP_005785656.1 CDS ycf NC_017375.1 1092945 1095755 R COG: COG0755; Pfam: PF01578; InterPro: IPR002541; cytochrome c biogenesis protein complement(1092945..1095755) Helicobacter pylori 83 12365892 YP_005785657.1 CDS dsbC NC_017375.1 1095764 1096435 R disulfide interchange protein complement(1095764..1096435) Helicobacter pylori 83 12365893 YP_005785658.1 CDS hemH NC_017375.1 1096509 1097516 R COG: COG0276; Pfam: PF00762; InterPro: IPR001015; ferrochelatase complement(1096509..1097516) Helicobacter pylori 83 12365894 YP_005785659.1 CDS HMPREF0462_1093 NC_017375.1 1097572 1098003 D TerC family integral membrane protein 1097572..1098003 Helicobacter pylori 83 12365895 YP_005785660.1 CDS HMPREF0462_1094 NC_017375.1 1098004 1098684 D COG: COG1385; Pfam: PF04452; InterPro: IPR006700; RsmE family RNA methyltransferase 1098004..1098684 Helicobacter pylori 83 12365896 YP_005785661.1 CDS homD NC_017375.1 1098708 1100936 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomD complement(1098708..1100936) Helicobacter pylori 83 12365897 YP_005785662.1 CDS dcd NC_017375.1 1101095 1101661 R COG: COG0717; Pfam: PF00692; InterPro: IPR011962; dCTP deaminase complement(1101095..1101661) Helicobacter pylori 83 12365898 YP_005785663.1 CDS accB NC_017375.1 1101788 1102258 D COG: COG0511; Pfam: PF00364; InterPro: IPR001249; acetyl-CoA carboxylase biotin carboxyl carrier subunit 1101788..1102258 Helicobacter pylori 83 12365899 YP_005785664.1 CDS accC NC_017375.1 1102264 1103631 D COG: COG0439; Pfam: PF00289,PF02786,PF02785; InterPro: IPR004549; acetyl-CoA carboxylase subunit A 1102264..1103631 Helicobacter pylori 83 12365900 YP_005785665.1 CDS HMPREF0462_1099 NC_017375.1 1103724 1104686 D type II DNA modification enzyme (methyltransferase) 1103724..1104686 Helicobacter pylori 83 12365901 YP_005785666.1 CDS HMPREF0462_1100 NC_017375.1 1104686 1105234 D hypothetical protein 1104686..1105234 Helicobacter pylori 83 12365902 YP_005785667.1 CDS HMPREF0462_1101 NC_017375.1 1105283 1105927 D hypothetical protein 1105283..1105927 Helicobacter pylori 83 12365903 YP_005785668.1 CDS pseC NC_017375.1 1105924 1107051 D COG: COG0399; Pfam: PF01041; InterPro: IPR000653; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 1105924..1107051 Helicobacter pylori 83 12365904 YP_005785669.1 CDS nrdB NC_017375.1 1107370 1108395 D COG: COG0208; Pfam: PF00268; InterPro: IPR000358; ribonucleotide-diphosphate reductase subunit beta 1107370..1108395 Helicobacter pylori 83 12365906 YP_005785670.1 CDS pcm NC_017375.1 1108405 1109034 D COG: COG2518; Pfam: PF01135; InterPro: IPR000682; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1108405..1109034 Helicobacter pylori 83 12365907 YP_005785671.1 CDS HMPREF0462_1105 NC_017375.1 1109045 1110082 D COG: COG0795; Pfam: PF03739; InterPro: IPR005495; hypothetical protein 1109045..1110082 Helicobacter pylori 83 12365908 YP_005785672.1 CDS truA NC_017375.1 1110083 1110811 D COG: COG0101; Pfam: PF01416; InterPro: IPR001406; tRNA pseudouridine synthase A 1110083..1110811 Helicobacter pylori 83 12365909 YP_005785673.1 CDS galE NC_017375.1 1110805 1111839 R COG: COG1087; Pfam: PF01370; InterPro: IPR005886; UDP-glucose 4-epimerase complement(1110805..1111839) Helicobacter pylori 83 12365910 YP_005785674.1 CDS HMPREF0462_1108 NC_017375.1 1112374 1113909 D outer membrane protein 1112374..1113909 Helicobacter pylori 83 12365913 YP_005785675.1 CDS ydfG NC_017375.1 1113931 1114683 D COG: COG4221; Pfam: PF00106; InterPro: IPR002198; NADP-dependent L-serine/L-allo-threonine dehydrogenase YdfG 1113931..1114683 Helicobacter pylori 83 12365914 YP_005785676.1 CDS hcpC NC_017375.1 1114872 1115744 R COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase complement(1114872..1115744) Helicobacter pylori 83 12365915 YP_005785677.1 CDS eda NC_017375.1 1115814 1116440 R COG: COG0800; Pfam: PF01081; InterPro: IPR013785; KHG/KDPG aldolase complement(1115814..1116440) Helicobacter pylori 83 12365916 YP_005785678.1 CDS edd NC_017375.1 1116459 1118402 R COG: COG0129; Pfam: PF00920; InterPro: IPR004786; phosphogluconate dehydratase complement(1116459..1118402) Helicobacter pylori 83 12365917 YP_005785679.1 CDS zwf NC_017375.1 1118353 1119630 D COG: COG0364; Pfam: PF00479,PF02781; InterPro: IPR001282; glucose-6-phosphate dehydrogenase 1118353..1119630 Helicobacter pylori 83 12365918 YP_005785680.1 CDS pgl NC_017375.1 1119641 1120324 D COG: COG0363; InterPro: IPR005900; 6-phosphogluconolactonase 1119641..1120324 Helicobacter pylori 83 12365919 YP_005785681.1 CDS glk NC_017375.1 1120311 1121321 D COG: COG0837; Pfam: PF02685; InterPro: IPR003836; glucokinase 1120311..1121321 Helicobacter pylori 83 12365920 YP_005785682.1 CDS adh NC_017375.1 1121482 1122528 D COG: COG1064; Pfam: PF08240,PF00107; InterPro: IPR002085; NADP-dependent alcohol dehydrogenase 1121482..1122528 Helicobacter pylori 83 12365921 YP_005785683.1 CDS HMPREF0462_1117 NC_017375.1 1122540 1123700 R COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide biosynthesis protein complement(1122540..1123700) Helicobacter pylori 83 12365922 YP_005785684.1 CDS HMPREF0462_1118 NC_017375.1 1123886 1125193 D hypothetical protein 1123886..1125193 Helicobacter pylori 83 12365923 YP_005785685.1 CDS HMPREF0462_1119 NC_017375.1 1125200 1125901 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(1125200..1125901) Helicobacter pylori 83 12365924 YP_005785686.1 CDS HMPREF0462_1120 NC_017375.1 1125965 1126087 R hypothetical protein complement(1125965..1126087) Helicobacter pylori 83 12365925 YP_005785687.1 CDS porG NC_017375.1 1126161 1126721 D COG: COG1014; Pfam: PF01558; InterPro: IPR011894; pyruvate synthase subunit PorC 1126161..1126721 Helicobacter pylori 83 12365926 YP_005785688.1 CDS porD NC_017375.1 1126737 1127129 D COG: COG1144; Pfam: PF00037; InterPro: IPR011898; pyruvate ferredoxin oxidoreductase 1126737..1127129 Helicobacter pylori 83 12365927 YP_005785689.1 CDS porA NC_017375.1 1127140 1128363 D COG: COG0674; Pfam: PF01855; InterPro: IPR002880; pyruvate ferredoxin oxidoreductase subunit alpha 1127140..1128363 Helicobacter pylori 83 12365928 YP_005785690.1 CDS porB NC_017375.1 1128376 1129320 D COG: COG1013; Pfam: PF02775; InterPro: IPR011766; pyruvate ferredoxin oxidoreductase subunit beta 1128376..1129320 Helicobacter pylori 83 12365929 YP_005785691.1 CDS purB NC_017375.1 1129430 1130752 D COG: COG0015; Pfam: PF00206; InterPro: IPR004769; adenylosuccinate lyase 1129430..1130752 Helicobacter pylori 83 12365930 YP_005785692.1 CDS HMPREF0462_1126 NC_017375.1 1130814 1131647 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1130814..1131647 Helicobacter pylori 83 12365931 YP_005785693.1 CDS uvrB NC_017375.1 1131644 1133635 R COG: COG0556; Pfam: PF04851,PF00271,PF02151; InterPro: IPR004807; excision endonuclease subunit UvrB complement(1131644..1133635) Helicobacter pylori 83 12365932 YP_005785694.1 CDS HMPREF0462_1128 NC_017375.1 1134768 1135631 R COG: COG0790; Pfam: PF08238; InterPro: IPR011990; cysteine-rich protein X complement(1134768..1135631) Helicobacter pylori 83 12365933 YP_005785695.1 CDS ggt NC_017375.1 1135822 1137525 R COG: COG0405; Pfam: PF01019; InterPro: IPR000101; gamma-glutamyltransferase complement(1135822..1137525) Helicobacter pylori 83 12365934 YP_005785696.1 CDS flgK NC_017375.1 1137728 1139548 R COG: COG1256; Pfam: PF00460,PF06429; InterPro: IPR002371; flagellar hook-associated protein FlgK complement(1137728..1139548) Helicobacter pylori 83 12365935 YP_005785697.1 CDS HMPREF0462_1131 NC_017375.1 1139550 1140020 R hypothetical protein complement(1139550..1140020) Helicobacter pylori 83 12365936 YP_005785698.1 CDS bsp6IM NC_017375.1 1140111 1141070 R COG: COG0270; Pfam: PF00145; InterPro: IPR001525; C-5 cytosine-specific DNA methylase complement(1140111..1141070) Helicobacter pylori 83 12365937 YP_005785699.1 CDS flgM NC_017375.1 1141208 1141411 R Pfam: PF05998; InterPro: IPR009250; negative regulator of flagellin synthesis FlgM complement(1141208..1141411) Helicobacter pylori 83 12365938 YP_005785700.1 CDS HMPREF0462_1134 NC_017375.1 1141474 1141680 R hypothetical protein complement(1141474..1141680) Helicobacter pylori 83 12365939 YP_005785701.1 CDS slyD NC_017375.1 1141712 1142260 R COG: COG1047; Pfam: PF00254; InterPro: IPR001179; peptidyl-prolyl cis-trans isomerase complement(1141712..1142260) Helicobacter pylori 83 12365940 YP_005785702.1 CDS HMPREF0462_1136 NC_017375.1 1142247 1143242 R Pfam: PF07719; hypothetical protein complement(1142247..1143242) Helicobacter pylori 83 12365941 YP_005785703.1 CDS HMPREF0462_1137 NC_017375.1 1143250 1143789 R COG: COG2885; Pfam: PF00691; InterPro: IPR006665; peptidoglycan associated lipoprotein complement(1143250..1143789) Helicobacter pylori 83 12365942 YP_005785704.1 CDS tolB NC_017375.1 1143855 1145108 R COG: COG0823; Pfam: PF04052,PF07676; InterPro: IPR014167; tol-Pal system beta propeller repeat protein TolB complement(1143855..1145108) Helicobacter pylori 83 12365943 YP_005785705.1 CDS HMPREF0462_1139 NC_017375.1 1145105 1145893 R hypothetical protein complement(1145105..1145893) Helicobacter pylori 83 12365944 YP_005785706.1 CDS HMPREF0462_1140 NC_017375.1 1145912 1146313 R COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TolR colicin import membrane protein complement(1145912..1146313) Helicobacter pylori 83 12365945 YP_005785707.1 CDS exbB NC_017375.1 1146366 1146959 R COG: COG0811; Pfam: PF01618; InterPro: IPR002898; biopolymer transporter complement(1146366..1146959) Helicobacter pylori 83 12365946 YP_005785708.1 CDS atpC NC_017375.1 1146946 1147317 R COG: COG0355; Pfam: PF02823; InterPro: IPR001469; ATP synthase F1 sector epsilon subunit complement(1146946..1147317) Helicobacter pylori 83 12365947 YP_005785709.1 CDS atpD NC_017375.1 1147328 1148737 R COG: COG0055; Pfam: PF02874,PF00006,PF00306; InterPro: IPR005722; ATP synthase F1 sector beta subunit complement(1147328..1148737) Helicobacter pylori 83 12365948 YP_005785710.1 CDS atpG NC_017375.1 1148757 1149662 R COG: COG0224; Pfam: PF00231; InterPro: IPR000131; ATP synthase F1 sector gamma subunit complement(1148757..1149662) Helicobacter pylori 83 12365949 YP_005785711.1 CDS atpA NC_017375.1 1149677 1151188 R COG: COG0056; Pfam: PF02874,PF00006,PF00306; InterPro: IPR005294; ATP synthase F1 subcomplex subunit alpha complement(1149677..1151188) Helicobacter pylori 83 12365950 YP_005785712.1 CDS atpH NC_017375.1 1151211 1151753 R ATP synthase F1 sector delta subunit complement(1151211..1151753) Helicobacter pylori 83 12365951 YP_005785713.1 CDS HMPREF0462_1147 NC_017375.1 1151754 1152269 R Pfam: PF00430; ATP synthase subunit B complement(1151754..1152269) Helicobacter pylori 83 12365952 YP_005785714.1 CDS atpF' NC_017375.1 1152273 1152707 R Pfam: PF00430; ATP synthase F0 complement(1152273..1152707) Helicobacter pylori 83 12365953 YP_005785715.1 CDS spo0J NC_017375.1 1152818 1153690 R COG: COG1475; Pfam: PF02195; InterPro: IPR004437; stage 0 DNA-binding protein complement(1152818..1153690) Helicobacter pylori 83 12365954 YP_005785716.1 CDS soj NC_017375.1 1153693 1154496 R COG: COG1192; Pfam: PF01656; InterPro: IPR002586; sporulation initiation inhibitor protein Soj complement(1153693..1154496) Helicobacter pylori 83 12365955 YP_005785717.1 CDS birA NC_017375.1 1154493 1155131 R COG: COG0340; Pfam: PF03099,PF02237; InterPro: IPR004408; biotin--protein ligase complement(1154493..1155131) Helicobacter pylori 83 12365956 YP_005785718.1 CDS fmt NC_017375.1 1155128 1156039 R COG: COG0223; Pfam: PF00551,PF02911; InterPro: IPR005794; methionyl-tRNA formyltransferase complement(1155128..1156039) Helicobacter pylori 83 12365957 YP_005785719.1 CDS HMPREF0462_1153 NC_017375.1 1156063 1158342 R hypothetical protein complement(1156063..1158342) Helicobacter pylori 83 12365958 YP_005785720.1 CDS HMPREF0462_1154 NC_017375.1 1158384 1159685 R COG: COG4487; hypothetical protein complement(1158384..1159685) Helicobacter pylori 83 12365959 YP_005785721.1 CDS HMPREF0462_1155 NC_017375.1 1162793 1163593 R COG: COG1432; hypothetical protein complement(1162793..1163593) Helicobacter pylori 83 12365961 YP_005785722.1 CDS rplS NC_017375.1 1163906 1164262 R COG: COG0335; Pfam: PF01245; InterPro: IPR001857; 50S ribosomal protein L19 complement(1163906..1164262) Helicobacter pylori 83 12365962 YP_005785723.1 CDS trmD NC_017375.1 1164284 1164973 R COG: COG0336; Pfam: PF01746; InterPro: IPR002649; tRNA (guanine-N1)-methyltransferase complement(1164284..1164973) Helicobacter pylori 83 12365963 YP_005785724.1 CDS rimM NC_017375.1 1164974 1165528 R COG: COG0806; Pfam: PF01782,PF05239; InterPro: IPR011961; 16S rRNA processing protein RimM complement(1164974..1165528) Helicobacter pylori 83 12365964 YP_005785725.1 CDS HMPREF0462_1159 NC_017375.1 1165529 1165876 R COG: COG1837; hypothetical protein complement(1165529..1165876) Helicobacter pylori 83 12365965 YP_005785726.1 CDS rpsP NC_017375.1 1165893 1166123 R COG: COG0228; Pfam: PF00886; InterPro: IPR000307; 30S ribosomal protein S16 complement(1165893..1166123) Helicobacter pylori 83 12365966 YP_005785727.1 CDS ffh NC_017375.1 1166197 1167543 R COG: COG0541; Pfam: PF02881,PF00448,PF02978; InterPro: IPR004780; signal recognition particle protein complement(1166197..1167543) Helicobacter pylori 83 12365967 YP_005785728.1 CDS valS NC_017375.1 1167558 1170176 R COG: COG0525; Pfam: PF00133,PF08264; InterPro: IPR002303; valine--tRNA ligase complement(1167558..1170176) Helicobacter pylori 83 12365968 YP_005785729.1 CDS HMPREF0462_1163 NC_017375.1 1170168 1170293 D hypothetical protein 1170168..1170293 Helicobacter pylori 83 12365969 YP_005785730.1 CDS HMPREF0462_1164 NC_017375.1 1170312 1170719 D COG: COG1699; Pfam: PF02623; InterPro: IPR003775; flagellar assembly factor FliW 1 1170312..1170719 Helicobacter pylori 83 12365970 YP_005785731.1 CDS murG NC_017375.1 1170731 1171792 D COG: COG0707; Pfam: PF03033,PF04101; InterPro: IPR006009; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1170731..1171792 Helicobacter pylori 83 12365971 YP_005785732.1 CDS HMPREF0462_1166 NC_017375.1 1171901 1173991 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1171901..1173991 Helicobacter pylori 83 12365972 YP_005785733.1 CDS HMPREF0462_1167 NC_017375.1 1174014 1177745 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1174014..1177745 Helicobacter pylori 83 12365973 YP_005785734.1 CDS proC NC_017375.1 1177759 1178553 D COG: COG0345; Pfam: PF03807; InterPro: IPR000304; pyrroline-5-carboxylate reductase 1177759..1178553 Helicobacter pylori 83 12365974 YP_005785735.1 CDS fic NC_017375.1 1178559 1179092 D COG: COG2184; Pfam: PF02661; InterPro: IPR003812; cell filamentation protein 1178559..1179092 Helicobacter pylori 83 12365975 YP_005785736.1 CDS HMPREF0462_1170 NC_017375.1 1179107 1179346 R hypothetical protein complement(1179107..1179346) Helicobacter pylori 83 12365976 YP_005785737.1 CDS HMPREF0462_1171 NC_017375.1 1179413 1179871 R hypothetical protein complement(1179413..1179871) Helicobacter pylori 83 12365977 YP_005785738.1 CDS HMPREF0462_1172 NC_017375.1 1179877 1180359 R hypothetical protein complement(1179877..1180359) Helicobacter pylori 83 12365978 YP_005785739.1 CDS HMPREF0462_1173 NC_017375.1 1180453 1180881 R COG: COG0319; Pfam: PF02130; InterPro: IPR002036; metalloprotease complement(1180453..1180881) Helicobacter pylori 83 12365979 YP_005785740.1 CDS HMPREF0462_1174 NC_017375.1 1180934 1181428 R COG: COG0716; Pfam: PF00258; InterPro: IPR010086; flavodoxin complement(1180934..1181428) Helicobacter pylori 83 12365980 YP_005785741.1 CDS HMPREF0462_1175 NC_017375.1 1181519 1182100 R COG: COG0586; integral membrane protein complement(1181519..1182100) Helicobacter pylori 83 12365981 YP_005785742.1 CDS ccoS NC_017375.1 1182228 1182419 D COG: COG3197; Pfam: PF03597; InterPro: IPR004714; cytochrome oxidase maturation protein 1182228..1182419 Helicobacter pylori 83 12365982 YP_005785743.1 CDS trxB2 NC_017375.1 1182441 1183409 D COG: COG0492; Pfam: PF00890,PF00070; pyridine nucleotide-disulfide oxidoreductase 1182441..1183409 Helicobacter pylori 83 12365983 YP_005785744.1 CDS HMPREF0462_1178 NC_017375.1 1183604 1184770 R COG: COG0477; Pfam: PF07690; InterPro: IPR011701; MccC family protein complement(1183604..1184770) Helicobacter pylori 83 12365984 YP_005785745.1 CDS pgi NC_017375.1 1184835 1186472 D COG: COG0166; Pfam: PF00342; InterPro: IPR001672; glucose-6-phosphate isomerase 1184835..1186472 Helicobacter pylori 83 12365985 YP_005785746.1 CDS hofH NC_017375.1 1186778 1188193 D Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 1186778..1188193 Helicobacter pylori 83 12365986 YP_005785747.1 CDS cstA NC_017375.1 1188537 1190630 R COG: COG1966; Pfam: PF02554; InterPro: IPR003706; carbon starvation protein A complement(1188537..1190630) Helicobacter pylori 83 12365987 YP_005785748.1 CDS glnP NC_017375.1 1190811 1191464 D COG: COG0765; Pfam: PF00528; InterPro: IPR000515; glutamine ABC superfamily ATP binding cassette transporter, membrane protein 1190811..1191464 Helicobacter pylori 83 12365988 YP_005785749.1 CDS glnP2 NC_017375.1 1191467 1192138 D COG: COG0765; Pfam: PF00528; InterPro: IPR000515; glutamine ABC superfamily ATP binding cassette transporter, membrane protein 1191467..1192138 Helicobacter pylori 83 12365989 YP_005785750.1 CDS glnQ NC_017375.1 1192140 1192886 D COG: COG1126; Pfam: PF00005; InterPro: IPR003439; glutamine ABC superfamily ATP binding cassette transporter, ABC protein 1192140..1192886 Helicobacter pylori 83 12365990 YP_005785751.1 CDS cjaA NC_017375.1 1192905 1193768 D COG: COG0834; Pfam: PF00497; InterPro: IPR001638; ABC superfamily ATP binding cassette transporter, binding protein 1192905..1193768 Helicobacter pylori 83 12365991 YP_005785752.1 CDS HMPREF0462_1186 NC_017375.1 1193889 1194440 D hypothetical protein 1193889..1194440 Helicobacter pylori 83 12365992 YP_005785753.1 CDS gluP NC_017375.1 1194677 1195888 R COG: COG0738; Pfam: PF07690; InterPro: IPR011701; glucose/galactose transporter complement(1194677..1195888) Helicobacter pylori 83 12365993 YP_005785754.1 CDS yieG NC_017375.1 1196018 1197325 R COG: COG2252; Pfam: PF00860; InterPro: IPR006043; NCS2 family nucleobase:cation symporter-2 complement(1196018..1197325) Helicobacter pylori 83 12365994 YP_005785755.1 CDS HMPREF0462_1189 NC_017375.1 1197754 1199679 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(1197754..1199679) Helicobacter pylori 83 12365995 YP_005785756.1 CDS HMPREF0462_1190 NC_017375.1 1199805 1200038 R hypothetical protein complement(1199805..1200038) Helicobacter pylori 83 12365996 YP_005785757.1 CDS deoD NC_017375.1 1200128 1200829 R COG: COG0813; Pfam: PF01048; InterPro: IPR000845; purine nucleoside phosphorylase complement(1200128..1200829) Helicobacter pylori 83 12365997 YP_005785758.1 CDS deoB NC_017375.1 1200826 1202067 R COG: COG1015; Pfam: PF08342,PF01676; InterPro: IPR010045; phosphopentomutase complement(1200826..1202067) Helicobacter pylori 83 12365998 YP_005785759.1 CDS nupC NC_017375.1 1202079 1203335 R COG: COG1972; Pfam: PF01773,PF07670,PF07662; InterPro: IPR008276; CNT family concentrative nucleoside transporter complement(1202079..1203335) Helicobacter pylori 83 12365999 YP_005785760.1 CDS HMPREF0462_1194 NC_017375.1 1203661 1204992 D COG: COG0477; Pfam: PF07690; InterPro: IPR011701; multidrug-efflux transporter 1203661..1204992 Helicobacter pylori 83 12366001 YP_005785761.1 CDS HMPREF0462_1195 NC_017375.1 1205021 1205782 D COG: COG0037; Pfam: PF01171; InterPro: IPR014729; PP-loop family protein 1205021..1205782 Helicobacter pylori 83 12366002 YP_005785762.1 CDS napA NC_017375.1 1205792 1206943 R COG: COG0475; Pfam: PF00999; InterPro: IPR006153; periplasmic nitrate reductase NapA complement(1205792..1206943) Helicobacter pylori 83 12366003 YP_005785763.1 CDS HMPREF0462_1197 NC_017375.1 1206969 1208348 R COG: COG0534; Pfam: PF01554; InterPro: IPR002528; hypothetical protein complement(1206969..1208348) Helicobacter pylori 83 12366004 YP_005785764.1 CDS HMPREF0462_1198 NC_017375.1 1208509 1209684 R COG: COG2814; Pfam: PF07690; InterPro: IPR011701; major facilitator family transporter complement(1208509..1209684) Helicobacter pylori 83 12366005 YP_005785765.1 CDS cah NC_017375.1 1209960 1210703 D COG: COG3338; Pfam: PF00194; InterPro: IPR001148; carbonate dehydratase 1209960..1210703 Helicobacter pylori 83 12366006 YP_005785766.1 CDS HMPREF0462_1200 NC_017375.1 1210939 1212099 R Pfam: PF05917; InterPro: IPR008592; hypothetical protein complement(1210939..1212099) Helicobacter pylori 83 12366007 YP_005785767.1 CDS asd NC_017375.1 1212530 1213570 R COG: COG0136; Pfam: PF01118,PF02774; InterPro: IPR005986; aspartate-semialdehyde dehydrogenase complement(1212530..1213570) Helicobacter pylori 83 12366008 YP_005785768.1 CDS hisS NC_017375.1 1213557 1214885 R COG: COG0124; Pfam: PF00587,PF03129; InterPro: IPR015805; histidine--tRNA ligase complement(1213557..1214885) Helicobacter pylori 83 12366009 YP_005785769.1 CDS rfaF NC_017375.1 1214947 1215996 D COG: COG0859; Pfam: PF01075; InterPro: IPR011910; heptosyltransferase II (RfaF) 1214947..1215996 Helicobacter pylori 83 12366010 YP_005785770.1 CDS HMPREF0462_1204 NC_017375.1 1216183 1216401 R secreted protein complement(1216183..1216401) Helicobacter pylori 83 12366011 YP_005785771.1 CDS HMPREF0462_1205 NC_017375.1 1216620 1216745 D hypothetical protein 1216620..1216745 Helicobacter pylori 83 12366012 YP_005785772.1 CDS fusA NC_017375.1 1216981 1219059 R COG: COG0480; Pfam: PF00009,PF03144,PF03764,PF00679; InterPro: IPR004540; elongation factor G complement(1216981..1219059) Helicobacter pylori 83 12366013 YP_005785773.1 CDS rpsG NC_017375.1 1219071 1219538 R COG: COG0049; Pfam: PF00177; InterPro: IPR000235; 30S ribosomal protein S7 complement(1219071..1219538) Helicobacter pylori 83 12366014 YP_005785774.1 CDS rpsL NC_017375.1 1219554 1219961 R COG: COG0048; Pfam: PF00164; InterPro: IPR012340; 30S ribosomal protein S12 complement(1219554..1219961) Helicobacter pylori 83 12366015 YP_005785775.1 CDS rpoBC NC_017375.1 1220049 1228721 R COG: COG0086; Pfam: PF04563,PF04561,PF04565,PF00562,PF04560,PF04997,PF00623, PF04983,PF05000,PF04998; InterPro: IPR012754; DNA-directed RNA polymerase complement(1220049..1228721) Helicobacter pylori 83 12366016 YP_005785776.1 CDS rplL NC_017375.1 1228946 1229323 R COG: COG0222; Pfam: PF00542; InterPro: IPR000206; 50S ribosomal protein L7/L12 complement(1228946..1229323) Helicobacter pylori 83 12366017 YP_005785777.1 CDS rplJ NC_017375.1 1229368 1229862 R COG: COG0244; Pfam: PF00466; InterPro: IPR001790; 50S ribosomal protein L10 complement(1229368..1229862) Helicobacter pylori 83 12366018 YP_005785778.1 CDS rplA NC_017375.1 1229971 1230675 R COG: COG0081; Pfam: PF00687; InterPro: IPR005878; 50S ribosomal protein L1 complement(1229971..1230675) Helicobacter pylori 83 12366019 YP_005785779.1 CDS rplK NC_017375.1 1230720 1231145 R COG: COG0080; Pfam: PF03946,PF00298; InterPro: IPR006519; 50S ribosomal protein L11 complement(1230720..1231145) Helicobacter pylori 83 12366020 YP_005785780.1 CDS nusG NC_017375.1 1231163 1231696 R COG: COG0250; Pfam: PF02357,PF00467; InterPro: IPR001062; transcription termination/antitermination factor NusG complement(1231163..1231696) Helicobacter pylori 83 12366021 YP_005785781.1 CDS secE NC_017375.1 1231720 1231899 R preprotein translocase complement(1231720..1231899) Helicobacter pylori 83 12366022 YP_005785782.1 CDS rpmG NC_017375.1 1232157 1232315 R COG: COG0267; Pfam: PF00471; InterPro: IPR001705; 50S ribosomal protein L33 complement(1232157..1232315) Helicobacter pylori 83 12366024 YP_005785783.1 CDS HMPREF0462_1217 NC_017375.1 1232349 1233548 R COG: COG0050; Pfam: PF00009,PF03144,PF03143; InterPro: IPR004541; elongation factor EF1A complement(1232349..1233548) Helicobacter pylori 83 12366025 YP_005785784.1 CDS wlaB NC_017375.1 1234255 1235991 D COG: COG1132; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC and permease protein 1234255..1235991 Helicobacter pylori 83 12366030 YP_005785785.1 CDS HMPREF0462_1219 NC_017375.1 1236000 1236668 R Pfam: PF00702; InterPro: IPR005834; hypothetical protein complement(1236000..1236668) Helicobacter pylori 83 12366031 YP_005785786.1 CDS hpyIM NC_017375.1 1236771 1237760 R COG: COG3392; Pfam: PF02086; InterPro: IPR012327; modification methylase NlaIII complement(1236771..1237760) Helicobacter pylori 83 12366032 YP_005785787.1 CDS iceA NC_017375.1 1237769 1238251 R Pfam: PF05315; InterPro: IPR007979; type II restriction enzyme NlaIII complement(1237769..1238251) Helicobacter pylori 83 12366033 YP_005785788.1 CDS HMPREF0462_1222 NC_017375.1 1238255 1238398 R Pfam: PF05315; InterPro: IPR007979; iceA1 complement(1238255..1238398) Helicobacter pylori 83 12366034 YP_005785789.1 CDS cysE NC_017375.1 1238450 1238965 R COG: COG1045; Pfam: PF00132; InterPro: IPR005881; serine O-acetyltransferase complement(1238450..1238965) Helicobacter pylori 83 12366035 YP_005785790.1 CDS HMPREF0462_1224 NC_017375.1 1239006 1239125 R hypothetical protein complement(1239006..1239125) Helicobacter pylori 83 12366037 YP_005785791.1 CDS atpE NC_017375.1 1239642 1239959 R COG: COG0636; Pfam: PF00137; InterPro: IPR002379; ATP synthase F0 subunit C complement(1239642..1239959) Helicobacter pylori 83 12366042 YP_005785792.1 CDS HMPREF0462_1226 NC_017375.1 1240057 1240179 R hypothetical protein complement(1240057..1240179) Helicobacter pylori 83 12366043 YP_005785793.1 CDS HMPREF0462_1227 NC_017375.1 1240339 1241019 D cell division protein FtsB-like protein 1240339..1241019 Helicobacter pylori 83 12366044 YP_005785794.1 CDS pnp NC_017375.1 1241410 1243476 R COG: COG1185; Pfam: PF01138,PF03725,PF03726,PF00013,PF00575; InterPro: IPR012162; polyribonucleotide nucleotidyltransferase complement(1241410..1243476) Helicobacter pylori 83 12366045 YP_005785795.1 CDS HMPREF0462_1229 NC_017375.1 1243479 1244201 R COG: COG1926; hypothetical protein complement(1243479..1244201) Helicobacter pylori 83 12366046 YP_005785796.1 CDS ostA NC_017375.1 1244198 1246459 R COG: COG1452; Pfam: PF04453; InterPro: IPR007543; organic solvent tolerance protein complement(1244198..1246459) Helicobacter pylori 83 12366047 YP_005785797.1 CDS HMPREF0462_1231 NC_017375.1 1246462 1246941 R hypothetical protein complement(1246462..1246941) Helicobacter pylori 83 12366048 YP_005785798.1 CDS purD NC_017375.1 1246983 1248257 R COG: COG0151; Pfam: PF02844,PF01071,PF02843; InterPro: IPR000115; phosphoribosylamine--glycine ligase complement(1246983..1248257) Helicobacter pylori 83 12366050 YP_005785799.1 CDS HMPREF0462_1233 NC_017375.1 1248376 1248567 D hypothetical protein 1248376..1248567 Helicobacter pylori 83 12366052 YP_005785800.1 CDS yhcG NC_017375.1 1248569 1249255 R COG: COG1131; Pfam: PF00005; InterPro: IPR003439; ABC transporter ATP-binding protein complement(1248569..1249255) Helicobacter pylori 83 12366053 YP_005785801.1 CDS uppS NC_017375.1 1249249 1249953 R COG: COG0020; Pfam: PF01255; InterPro: IPR001441; di-trans,poly-cis-decaprenylcistransferase complement(1249249..1249953) Helicobacter pylori 83 12366054 YP_005785802.1 CDS dld NC_017375.1 1249993 1252833 R COG: COG0277; Pfam: PF01565,PF02913,PF00037; InterPro: IPR004113; oxidoreductase complement(1249993..1252833) Helicobacter pylori 83 12366055 YP_005785803.1 CDS HMPREF0462_1237 NC_017375.1 1252905 1253237 D COG: COG0607; Pfam: PF00581; InterPro: IPR001763; hypothetical protein 1252905..1253237 Helicobacter pylori 83 12366056 YP_005785804.1 CDS hemD NC_017375.1 1253240 1253920 D COG: COG1587; Pfam: PF02602; InterPro: IPR003754; uroporphyrinogen-III synthase 1253240..1253920 Helicobacter pylori 83 12366057 YP_005785805.1 CDS crcB NC_017375.1 1253967 1254359 D COG: COG0239; Pfam: PF02537; InterPro: IPR003691; camphor resistance protein CrcB 1253967..1254359 Helicobacter pylori 83 12366058 YP_005785806.1 CDS HMPREF0462_1240 NC_017375.1 1254404 1255462 R COG: COG0635; Pfam: PF04055,PF06969; InterPro: IPR004559; coproporphyrinogen dehydrogenase complement(1254404..1255462) Helicobacter pylori 83 12366059 YP_005785807.1 CDS HMPREF0462_1241 NC_017375.1 1255537 1255827 D COG: COG2863; Pfam: PF00034; InterPro: IPR009056; cytochrome c-553 1255537..1255827 Helicobacter pylori 83 12366060 YP_005785808.1 CDS nidH NC_017375.1 1255986 1256453 D COG: COG0494; Pfam: PF00293; InterPro: IPR000086; dinucleoside polyphosphate hydrolase 1255986..1256453 Helicobacter pylori 83 12366061 YP_005785809.1 CDS lysC NC_017375.1 1256455 1257672 D COG: COG0527; Pfam: PF00696,PF01842; InterPro: IPR005260; aspartate kinase 1256455..1257672 Helicobacter pylori 83 12366062 YP_005785810.1 CDS HMPREF0462_1244 NC_017375.1 1257669 1258211 D hypothetical protein 1257669..1258211 Helicobacter pylori 83 12366063 YP_005785811.1 CDS holB NC_017375.1 1258208 1258864 D DNA-directed DNA polymerase III subunit delta' 1258208..1258864 Helicobacter pylori 83 12366064 YP_005785812.1 CDS folP NC_017375.1 1258861 1260003 D COG: COG0294; Pfam: PF00809; InterPro: IPR000489; dihydropteroate synthase 1258861..1260003 Helicobacter pylori 83 12366065 YP_005785813.1 CDS HMPREF0462_1247 NC_017375.1 1260028 1260489 R hypothetical protein complement(1260028..1260489) Helicobacter pylori 83 12366066 YP_005785814.1 CDS HMPREF0462_1248 NC_017375.1 1260908 1261774 D COG: COG0697; Pfam: PF00892; InterPro: IPR000620; hypothetical protein 1260908..1261774 Helicobacter pylori 83 12366067 YP_005785815.1 CDS HMPREF0462_1249 NC_017375.1 1261778 1263025 D integral membrane protein 1261778..1263025 Helicobacter pylori 83 12366068 YP_005785816.1 CDS HMPREF0462_1250 NC_017375.1 1263104 1263655 D COG: COG2952; Pfam: PF04368; InterPro: IPR007463; hypothetical protein 1263104..1263655 Helicobacter pylori 83 12366069 YP_005785817.1 CDS carA NC_017375.1 1263655 1264782 D COG: COG0505; Pfam: PF00988,PF00117; InterPro: IPR006274; carbamoyl-phosphate synthase small subunit 1263655..1264782 Helicobacter pylori 83 12366070 YP_005785818.1 CDS amiE2 NC_017375.1 1264949 1265953 D COG: COG0388; Pfam: PF00795; InterPro: IPR003010; aliphatic amidase 1264949..1265953 Helicobacter pylori 83 12366071 YP_005785819.1 CDS HMPREF0462_1253 NC_017375.1 1266461 1266610 R hypothetical protein complement(1266461..1266610) Helicobacter pylori 83 12366072 YP_005785820.1 CDS HMPREF0462_1254 NC_017375.1 1266628 1266843 R hypothetical protein complement(1266628..1266843) Helicobacter pylori 83 12366073 YP_005785821.1 CDS HMPREF0462_1255 NC_017375.1 1267018 1267179 R hypothetical protein complement(1267018..1267179) Helicobacter pylori 83 12366074 YP_005785822.1 CDS maf2 NC_017375.1 1267285 1267857 R COG: COG0424; Pfam: PF02545; InterPro: IPR003697; septum formation protein Maf complement(1267285..1267857) Helicobacter pylori 83 12366075 YP_005785823.1 CDS alaS NC_017375.1 1267859 1270402 R COG: COG0013; Pfam: PF01411,PF07973,PF02272; InterPro: IPR002318; alanine--tRNA ligase complement(1267859..1270402) Helicobacter pylori 83 12366076 YP_005785824.1 CDS HMPREF0462_1258 NC_017375.1 1270522 1270752 D COG: COG2841; Pfam: PF04325; InterPro: IPR007420; hypothetical protein 1270522..1270752 Helicobacter pylori 83 12366077 YP_005785825.1 CDS HMPREF0462_1259 NC_017375.1 1271587 1273707 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(1271587..1273707) Helicobacter pylori 83 12366078 YP_005785826.1 CDS rpsR NC_017375.1 1274185 1274442 R COG: COG0238; Pfam: PF01084; InterPro: IPR001648; 30S ribosomal protein S18 complement(1274185..1274442) Helicobacter pylori 83 12366079 YP_005785827.1 CDS ssb NC_017375.1 1274466 1275011 R COG: COG0629; Pfam: PF00436; InterPro: IPR011344; single-strand binding protein complement(1274466..1275011) Helicobacter pylori 83 12366080 YP_005785828.1 CDS rpsF NC_017375.1 1275021 1275497 R COG: COG0360; Pfam: PF01250; InterPro: IPR014717; 30S ribosomal protein S6 complement(1275021..1275497) Helicobacter pylori 83 12366081 YP_005785829.1 CDS HMPREF0462_1263 NC_017375.1 1275592 1276614 R COG: COG1466; Pfam: PF06144; DNA polymerase III subunit delta complement(1275592..1276614) Helicobacter pylori 83 12366082 YP_005785830.1 CDS HMPREF0462_1264 NC_017375.1 1276604 1278538 R COG: COG0557; Pfam: PF00773; InterPro: IPR004476; 3'-5' exoribonuclease R complement(1276604..1278538) Helicobacter pylori 83 12366083 YP_005785831.1 CDS aroE NC_017375.1 1278538 1279329 R COG: COG0169; Pfam: PF08501,PF01488; InterPro: IPR011342; shikimate dehydrogenase complement(1278538..1279329) Helicobacter pylori 83 12366084 YP_005785832.1 CDS HMPREF0462_1266 NC_017375.1 1279337 1279924 R Pfam: PF08239; InterPro: IPR003646; bacterial SH3 domain protein complement(1279337..1279924) Helicobacter pylori 83 12366085 YP_005785833.1 CDS yejB NC_017375.1 1279933 1280979 R COG: COG4174; Pfam: PF00528; InterPro: IPR000515; oligopeptide/dipeptide ABC superfamily ATP binding cassette transporter, permease protein complement(1279933..1280979) Helicobacter pylori 83 12366086 YP_005785834.1 CDS oppA NC_017375.1 1280976 1282757 R COG: COG4166; Pfam: PF00496; InterPro: IPR000914; oligopeptide ABC superfamily ATP binding cassette transporter, binding protein complement(1280976..1282757) Helicobacter pylori 83 12366087 YP_005785835.1 CDS trpS NC_017375.1 1282758 1283738 R COG: COG0180; Pfam: PF00579; InterPro: IPR002306; tryptophan--tRNA ligase complement(1282758..1283738) Helicobacter pylori 83 12366088 YP_005785836.1 CDS bioC NC_017375.1 1283810 1284571 R COG: COG0500; Pfam: PF08241; InterPro: IPR011814; biotin biosynthesis protein BioC complement(1283810..1284571) Helicobacter pylori 83 12366089 YP_005785837.1 CDS secG NC_017375.1 1284672 1285307 D COG: COG1314; Pfam: PF03840; InterPro: IPR004692; preprotein translocase subunit SecG 1284672..1285307 Helicobacter pylori 83 12366090 YP_005785838.1 CDS frr NC_017375.1 1285307 1285864 D COG: COG0233; Pfam: PF01765; InterPro: IPR015998; ribosome recycling factor 1285307..1285864 Helicobacter pylori 83 12366091 YP_005785839.1 CDS pyrE NC_017375.1 1285868 1286473 D COG: COG0461; Pfam: PF00156; InterPro: IPR006273; orotate phosphoribosyltransferase 1285868..1286473 Helicobacter pylori 83 12366092 YP_005785840.1 CDS HMPREF0462_1274 NC_017375.1 1286463 1286927 D COG: COG1714; Pfam: PF06271; InterPro: IPR010432; conserved hypothetical mitochondrial protein family protein 4; hypothetical protein 1286463..1286927 Helicobacter pylori 83 12366093 YP_005785841.1 CDS HMPREF0462_1275 NC_017375.1 1286924 1287613 D COG: COG0846; Pfam: PF02146; InterPro: IPR003000; NAD-dependent deacetylase 1286924..1287613 Helicobacter pylori 83 12366094 YP_005785842.1 CDS nuoA NC_017375.1 1287721 1288122 D COG: COG0838; Pfam: PF00507; InterPro: IPR000440; NADH-quinone oxidoreductase subunit A 1287721..1288122 Helicobacter pylori 83 12366095 YP_005785843.1 CDS nuoB NC_017375.1 1288122 1288601 D COG: COG0377; Pfam: PF01058; InterPro: IPR014406; NADH-quinone oxidoreductase subunit B 1288122..1288601 Helicobacter pylori 83 12366096 YP_005785844.1 CDS nuoC NC_017375.1 1288601 1289398 D COG: COG0852; Pfam: PF00329; InterPro: IPR010218; NADH-quinone oxidoreductase subunit C/D 1288601..1289398 Helicobacter pylori 83 12366097 YP_005785845.1 CDS nuoD NC_017375.1 1289400 1290629 D COG: COG0649; Pfam: PF00346; InterPro: IPR010219; NADH-quinone oxidoreductase subunit C/D 1289400..1290629 Helicobacter pylori 83 12366098 YP_005785846.1 CDS nuoE NC_017375.1 1290626 1290856 D NADH-quinone oxidoreductase subunit E 1290626..1290856 Helicobacter pylori 83 12366099 YP_005785847.1 CDS nuoF NC_017375.1 1290859 1291845 D NADH-quinone oxidoreductase subunit F 1290859..1291845 Helicobacter pylori 83 12366100 YP_005785848.1 CDS nqo NC_017375.1 1291842 1294376 D COG: COG1034; Pfam: PF00111,PF00037; InterPro: IPR001041; NADH-ubiquinone oxidoreductase 1291842..1294376 Helicobacter pylori 83 12366101 YP_005785849.1 CDS nuoH NC_017375.1 1294373 1295362 D COG: COG1005; Pfam: PF00146; InterPro: IPR001694; NADH-quinone oxidoreductase subunit H 1294373..1295362 Helicobacter pylori 83 12366102 YP_005785850.1 CDS nuoI NC_017375.1 1295373 1296035 D COG: COG1143; Pfam: PF00037; InterPro: IPR010226; NADH-quinone oxidoreductase subunit I 1295373..1296035 Helicobacter pylori 83 12366103 YP_005785851.1 CDS nqo2 NC_017375.1 1296022 1296576 D COG: COG0839; Pfam: PF00499; InterPro: IPR001457; NADH-ubiquinone oxidoreductase 1296022..1296576 Helicobacter pylori 83 12366104 YP_005785852.1 CDS nuoK NC_017375.1 1296573 1296875 D COG: COG0713; Pfam: PF00420; InterPro: IPR001133; NADH-quinone oxidoreductase subunit K 1296573..1296875 Helicobacter pylori 83 12366105 YP_005785853.1 CDS nuoL NC_017375.1 1296878 1298716 D COG: COG1009; Pfam: PF00662,PF00361,PF06455; InterPro: IPR003945; NADH-quinone oxidoreductase subunit L 1296878..1298716 Helicobacter pylori 83 12366106 YP_005785854.1 CDS nuoM NC_017375.1 1298720 1300258 D COG: COG1008; Pfam: PF00361; InterPro: IPR010227; NADH-quinone oxidoreductase subunit M 1298720..1300258 Helicobacter pylori 83 12366107 YP_005785855.1 CDS nqo3 NC_017375.1 1300245 1301717 D COG: COG1007; Pfam: PF00361; InterPro: IPR010096; NADH-ubiquinone oxidoreductase 1300245..1301717 Helicobacter pylori 83 12366108 YP_005785856.1 CDS pflA NC_017375.1 1301707 1304118 D Pfam: PF07719; paralysed flagella protein 1301707..1304118 Helicobacter pylori 83 12366109 YP_005785857.1 CDS algC NC_017375.1 1304120 1305496 D COG: COG1109; Pfam: PF02878,PF02879,PF02880,PF00408; InterPro: IPR016055; phosphomannomutase 1304120..1305496 Helicobacter pylori 83 12366110 YP_005785858.1 CDS HMPREF0462_1292 NC_017375.1 1305607 1305774 D hypothetical protein 1305607..1305774 Helicobacter pylori 83 12366111 YP_005785859.1 CDS trpA NC_017375.1 1306210 1306998 R COG: COG0159; Pfam: PF00290; InterPro: IPR013785; tryptophan synthase subunit alpha complement(1306210..1306998) Helicobacter pylori 83 12366112 YP_005785860.1 CDS trpB NC_017375.1 1307000 1308175 R COG: COG0133; Pfam: PF00291; InterPro: IPR006654; tryptophan synthase subunit beta complement(1307000..1308175) Helicobacter pylori 83 12366113 YP_005785861.1 CDS trpC2 NC_017375.1 1308177 1309535 R COG: COG0134; Pfam: PF00218,PF00697; InterPro: IPR013785; Indole-3-glycerol phosphate synthase complement(1308177..1309535) Helicobacter pylori 83 12366114 YP_005785862.1 CDS trpD NC_017375.1 1309528 1310538 R COG: COG0547; Pfam: PF02885,PF00591; InterPro: IPR005940; anthranilate phosphoribosyltransferase complement(1309528..1310538) Helicobacter pylori 83 12366115 YP_005785863.1 CDS trpG NC_017375.1 1310535 1311116 R COG: COG0512; Pfam: PF00117; InterPro: IPR006221; anthranilate synthase component II complement(1310535..1311116) Helicobacter pylori 83 12366116 YP_005785864.1 CDS trpE NC_017375.1 1311113 1312615 R COG: COG0147; Pfam: PF04715,PF00425; InterPro: IPR005801; anthranilate synthase component I TrpE complement(1311113..1312615) Helicobacter pylori 83 12366117 YP_005785865.1 CDS HMPREF0462_1299 NC_017375.1 1312848 1313906 R COG: COG0859; heptosyltransferase III complement(1312848..1313906) Helicobacter pylori 83 12366118 YP_005785866.1 CDS HMPREF0462_1300 NC_017375.1 1313973 1314710 R COG: COG2503; Pfam: PF03767; InterPro: IPR006423; acid phosphatase lipoprotein complement(1313973..1314710) Helicobacter pylori 83 12366119 YP_005785867.1 CDS HMPREF0462_1301 NC_017375.1 1314833 1315381 D COG: COG2353; Pfam: PF04264; InterPro: IPR007372; hypothetical protein 1314833..1315381 Helicobacter pylori 83 12366120 YP_005785868.1 CDS tenA NC_017375.1 1316105 1316626 D COG: COG0819; Pfam: PF03070; InterPro: IPR004305; TENA/THI-4 family protein 1316105..1316626 Helicobacter pylori 83 12366121 YP_005785869.1 CDS pnuC NC_017375.1 1316748 1317410 D COG: COG3201; Pfam: PF04973; InterPro: IPR006419; nicotinamide mononucleotide transporter 1316748..1317410 Helicobacter pylori 83 12366122 YP_005785870.1 CDS HMPREF0462_1304 NC_017375.1 1317398 1318012 D COG: COG1564; Pfam: PF04263; InterPro: IPR006282; thiamine diphosphokinase 1317398..1318012 Helicobacter pylori 83 12366123 YP_005785871.1 CDS rplQ NC_017375.1 1318516 1318866 R COG: COG0203; Pfam: PF01196; InterPro: IPR000456; 50S ribosomal protein L17 complement(1318516..1318866) Helicobacter pylori 83 12366124 YP_005785872.1 CDS rpoA NC_017375.1 1318866 1319900 R COG: COG0202; Pfam: PF01193,PF01000,PF03118; InterPro: IPR011773; DNA-directed RNA polymerase subunit alpha complement(1318866..1319900) Helicobacter pylori 83 12366125 YP_005785873.1 CDS rpsD NC_017375.1 1319912 1320538 R COG: COG0522; Pfam: PF00163,PF01479; InterPro: IPR005709; 30S ribosomal protein S4 complement(1319912..1320538) Helicobacter pylori 83 12366126 YP_005785874.1 CDS rpsK NC_017375.1 1320548 1320943 R COG: COG0100; Pfam: PF00411; InterPro: IPR001971; 30S ribosomal protein S11 complement(1320548..1320943) Helicobacter pylori 83 12366127 YP_005785875.1 CDS rpsM NC_017375.1 1320966 1321328 R COG: COG0099; Pfam: PF00416; InterPro: IPR001892; 30S ribosomal protein S13 complement(1320966..1321328) Helicobacter pylori 83 12366128 YP_005785876.1 CDS infA NC_017375.1 1321524 1321742 R COG: COG0361; Pfam: PF01176; InterPro: IPR012340; translation initiation factor IF-1 complement(1321524..1321742) Helicobacter pylori 83 12366129 YP_005785877.1 CDS map NC_017375.1 1321742 1322503 R COG: COG0024; Pfam: PF00557; InterPro: IPR002467; methionine aminopeptidase complement(1321742..1322503) Helicobacter pylori 83 12366130 YP_005785878.1 CDS secY NC_017375.1 1322503 1323765 R COG: COG0201; Pfam: PF00344; InterPro: IPR002208; preprotein translocase subunit SecY complement(1322503..1323765) Helicobacter pylori 83 12366131 YP_005785879.1 CDS rplO NC_017375.1 1323803 1324210 R COG: COG0200; Pfam: PF01305; InterPro: IPR005749; 50S ribosomal protein L15 complement(1323803..1324210) Helicobacter pylori 83 12366132 YP_005785880.1 CDS rpsE NC_017375.1 1324222 1324683 R COG: COG0098; Pfam: PF00333,PF03719; InterPro: IPR000851; 30S ribosomal protein S5 complement(1324222..1324683) Helicobacter pylori 83 12366133 YP_005785881.1 CDS rplR NC_017375.1 1324680 1325036 R COG: COG0256; Pfam: PF00861; InterPro: IPR005484; 50S ribosomal protein L18 complement(1324680..1325036) Helicobacter pylori 83 12366134 YP_005785882.1 CDS rplF NC_017375.1 1325050 1325586 R COG: COG0097; Pfam: PF00347; InterPro: IPR000702; 50S ribosomal protein L6 complement(1325050..1325586) Helicobacter pylori 83 12366135 YP_005785883.1 CDS rpsH NC_017375.1 1325597 1325992 R COG: COG0096; Pfam: PF00410; InterPro: IPR000630; 30S ribosomal protein S8 complement(1325597..1325992) Helicobacter pylori 83 12366136 YP_005785884.1 CDS rpsN NC_017375.1 1326002 1326187 R COG: COG0199; Pfam: PF00253; InterPro: IPR001209; 30S ribosomal protein S14 complement(1326002..1326187) Helicobacter pylori 83 12366137 YP_005785885.1 CDS rplE NC_017375.1 1326197 1326742 R COG: COG0094; Pfam: PF00281,PF00673; InterPro: IPR002132; 50S ribosomal protein L5 complement(1326197..1326742) Helicobacter pylori 83 12366138 YP_005785886.1 CDS rplX NC_017375.1 1326755 1326976 R COG: COG0198; Pfam: PF00467; InterPro: IPR003256; 50S ribosomal protein L24 complement(1326755..1326976) Helicobacter pylori 83 12366139 YP_005785887.1 CDS rplN NC_017375.1 1326976 1327344 R COG: COG0093; Pfam: PF00238; InterPro: IPR005745; 50S ribosomal protein L14 complement(1326976..1327344) Helicobacter pylori 83 12366140 YP_005785888.1 CDS rpsQ NC_017375.1 1327347 1327607 R COG: COG0186; Pfam: PF00366; InterPro: IPR012340; 30S ribosomal protein S17 complement(1327347..1327607) Helicobacter pylori 83 12366141 YP_005785889.1 CDS rpmC NC_017375.1 1327622 1327822 R Pfam: PF00831; InterPro: IPR001854; 50S ribosomal protein L29 complement(1327622..1327822) Helicobacter pylori 83 12366142 YP_005785890.1 CDS rplP NC_017375.1 1327809 1328234 R COG: COG0197; Pfam: PF00252; InterPro: IPR000114; 50S ribosomal protein L16 complement(1327809..1328234) Helicobacter pylori 83 12366143 YP_005785891.1 CDS rpsC NC_017375.1 1328237 1328941 R COG: COG0092; Pfam: PF00417,PF07650,PF00189; InterPro: IPR005704; 30S ribosomal protein S3 complement(1328237..1328941) Helicobacter pylori 83 12366144 YP_005785892.1 CDS rplV NC_017375.1 1328945 1329313 R COG: COG0091; Pfam: PF00237; InterPro: IPR001063; 50S ribosomal protein L22 complement(1328945..1329313) Helicobacter pylori 83 12366145 YP_005785893.1 CDS rpsS NC_017375.1 1329324 1329605 R COG: COG0185; Pfam: PF00203; InterPro: IPR002222; 30S ribosomal protein S19 complement(1329324..1329605) Helicobacter pylori 83 12366146 YP_005785894.1 CDS rplB NC_017375.1 1329617 1330447 R COG: COG0090; Pfam: PF00181,PF03947; InterPro: IPR005880; 50S ribosomal protein L2 complement(1329617..1330447) Helicobacter pylori 83 12366147 YP_005785895.1 CDS rplW NC_017375.1 1330463 1330744 R COG: COG0089; Pfam: PF00276; InterPro: IPR012677; 50S ribosomal protein L23 complement(1330463..1330744) Helicobacter pylori 83 12366148 YP_005785896.1 CDS rplD NC_017375.1 1330748 1331395 R COG: COG0088; Pfam: PF00573; InterPro: IPR002136; 50S ribosomal protein L4/L1 family protein complement(1330748..1331395) Helicobacter pylori 83 12366149 YP_005785897.1 CDS rplC NC_017375.1 1331438 1332013 R COG: COG0087; Pfam: PF00297; InterPro: IPR000597; 50S ribosomal protein L3 complement(1331438..1332013) Helicobacter pylori 83 12366150 YP_005785898.1 CDS rpsJ NC_017375.1 1332050 1332364 R COG: COG0051; Pfam: PF00338; InterPro: IPR001848; 30S ribosomal protein S10 complement(1332050..1332364) Helicobacter pylori 83 12366151 YP_005785899.1 CDS HMPREF0462_1333 NC_017375.1 1332574 1333656 D ATP-binding protein 1332574..1333656 Helicobacter pylori 83 12366152 YP_005785900.1 CDS HMPREF0462_1334 NC_017375.1 1333847 1334428 D hypothetical protein 1333847..1334428 Helicobacter pylori 83 12366153 YP_005785901.1 CDS rnhB NC_017375.1 1334402 1335016 R COG: COG0164; Pfam: PF01351; InterPro: IPR001352; ribonuclease HII complement(1334402..1335016) Helicobacter pylori 83 12366154 YP_005785902.1 CDS HMPREF0462_1336 NC_017375.1 1335013 1335735 R hypothetical protein complement(1335013..1335735) Helicobacter pylori 83 12366155 YP_005785903.1 CDS HMPREF0462_1337 NC_017375.1 1335690 1337645 R hypothetical protein complement(1335690..1337645) Helicobacter pylori 83 12366156 YP_005785904.1 CDS fumC NC_017375.1 1337649 1339040 R COG: COG0114; Pfam: PF00206; InterPro: IPR005677; fumarate hydratase complement(1337649..1339040) Helicobacter pylori 83 12366157 YP_005785905.1 CDS HMPREF0462_1339 NC_017375.1 1339215 1339592 D hypothetical protein 1339215..1339592 Helicobacter pylori 83 12366158 YP_005785906.1 CDS HMPREF0462_1340 NC_017375.1 1339597 1340835 D Pfam: PF02321; InterPro: IPR003423; hypothetical protein 1339597..1340835 Helicobacter pylori 83 12366159 YP_005785907.1 CDS czcA2 NC_017375.1 1340832 1341839 D COG: COG0845; InterPro: IPR006143; cation efflux system protein 1340832..1341839 Helicobacter pylori 83 12366160 YP_005785908.1 CDS czcA3 NC_017375.1 1341840 1344953 D COG: COG3696; Pfam: PF00873; InterPro: IPR004763; cation efflux system protein 1341840..1344953 Helicobacter pylori 83 12366161 YP_005785909.1 CDS HMPREF0462_1343 NC_017375.1 1344950 1345297 R COG: COG1687; Pfam: PF05437; InterPro: IPR008407; branched-chain amino acid transporter complement(1344950..1345297) Helicobacter pylori 83 12366162 YP_005785910.1 CDS azlC NC_017375.1 1345291 1345977 R COG: COG1296; Pfam: PF03591; InterPro: IPR004471; azaleucine resistance protein AzlC complement(1345291..1345977) Helicobacter pylori 83 12366163 YP_005785911.1 CDS dnaJ2 NC_017375.1 1345988 1347097 R COG: COG0484; Pfam: PF00226,PF00684,PF01556; InterPro: IPR012724; chaperone DnaJ complement(1345988..1347097) Helicobacter pylori 83 12366164 YP_005785912.1 CDS HMPREF0462_1346 NC_017375.1 1347221 1348351 D hypothetical protein 1347221..1348351 Helicobacter pylori 83 12366165 YP_005785913.1 CDS HMPREF0462_1347 NC_017375.1 1348881 1349129 D hypothetical protein 1348881..1349129 Helicobacter pylori 83 12366166 YP_005785914.1 CDS trmU2 NC_017375.1 1349307 1350368 R COG: COG0482; Pfam: PF03054; InterPro: IPR004506; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase complement(1349307..1350368) Helicobacter pylori 83 12366167 YP_005785915.1 CDS HMPREF0462_1349 NC_017375.1 1350415 1351236 D Pfam: PF00226; hypothetical protein 1350415..1351236 Helicobacter pylori 83 12366168 YP_005785916.1 CDS nadD NC_017375.1 1351233 1351757 R COG: COG1057; Pfam: PF01467; InterPro: IPR005248; nicotinate-nucleotide adenylyltransferase complement(1351233..1351757) Helicobacter pylori 83 12366169 YP_005785917.1 CDS nikR NC_017375.1 1351741 1352187 R COG: COG0864; Pfam: PF01402,PF08753; InterPro: IPR014864; CopG family transcriptional regulator complement(1351741..1352187) Helicobacter pylori 83 12366170 YP_005785918.1 CDS exbB2 NC_017375.1 1352507 1352944 D COG: COG0811; Pfam: PF01618; InterPro: IPR014172; TonB-system energizer ExbB 1352507..1352944 Helicobacter pylori 83 12366171 YP_005785919.1 CDS expD NC_017375.1 1352941 1353330 D COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TonB system transporter ExbD 1352941..1353330 Helicobacter pylori 83 12366172 YP_005785920.1 CDS HMPREF0462_1354 NC_017375.1 1353296 1354159 D COG: COG0810; Pfam: PF03544; InterPro: IPR006260; siderophore-mediated iron transport protein TonB 1353296..1354159 Helicobacter pylori 83 12366173 YP_005785921.1 CDS dpnA NC_017375.1 1354287 1354625 D COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 1354287..1354625 Helicobacter pylori 83 12366174 YP_005785922.1 CDS aguA NC_017375.1 1354677 1355669 D COG: COG2957; Pfam: PF04371; InterPro: IPR007466; agmatine deiminase 1354677..1355669 Helicobacter pylori 83 12366175 YP_005785923.1 CDS hypF NC_017375.1 1355666 1357918 D COG: COG0068; Pfam: PF00708,PF07503,PF01300; InterPro: IPR004421; hydrogenase maturation protein HypF 1355666..1357918 Helicobacter pylori 83 12366176 YP_005785924.1 CDS hypE NC_017375.1 1357921 1358919 D COG: COG0309; Pfam: PF00586,PF02769; InterPro: IPR011854; hydrogenase expression/formation protein HypE 1357921..1358919 Helicobacter pylori 83 12366177 YP_005785925.1 CDS fcl NC_017375.1 1359169 1360101 R COG: COG0451; Pfam: PF01370; InterPro: IPR001509; GDP-L-fucose synthase complement(1359169..1360101) Helicobacter pylori 83 12366178 YP_005785926.1 CDS gmd NC_017375.1 1360094 1361287 R COG: COG1089; Pfam: PF01370; InterPro: IPR006368; GDP-mannose 4,6-dehydratase complement(1360094..1361287) Helicobacter pylori 83 12366179 YP_005785927.1 CDS pmi NC_017375.1 1361253 1362665 R COG: COG0836; Pfam: PF00483,PF01050; InterPro: IPR006375; mannose-6-phosphate isomerase complement(1361253..1362665) Helicobacter pylori 83 12366180 YP_005785928.1 CDS comB3 NC_017375.1 1362736 1363872 R COG: COG2948; Pfam: PF03743; InterPro: IPR005498; competence factor transporter ComB complement(1362736..1363872) Helicobacter pylori 83 12366181 YP_005785929.1 CDS comB4 NC_017375.1 1363865 1364833 R COG: COG3504; Pfam: PF03524; competence factor transporter ComB complement(1363865..1364833) Helicobacter pylori 83 12366182 YP_005785930.1 CDS comB5 NC_017375.1 1364833 1365576 R COG: COG3736; Pfam: PF04335; InterPro: IPR007430; competence factor transporter ComB complement(1364833..1365576) Helicobacter pylori 83 12366183 YP_005785931.1 CDS HMPREF0462_1365 NC_017375.1 1365714 1366769 R NADH-ubiquinone oxidoreductase subunit complement(1365714..1366769) Helicobacter pylori 83 12366184 YP_005785932.1 CDS HMPREF0462_1366 NC_017375.1 1366777 1367772 R hypothetical protein complement(1366777..1367772) Helicobacter pylori 83 12366185 YP_005785933.1 CDS HMPREF0462_1367 NC_017375.1 1367772 1368065 R COG: COG0718; Pfam: PF02575; InterPro: IPR004401; hypothetical protein complement(1367772..1368065) Helicobacter pylori 83 12366186 YP_005785934.1 CDS panD NC_017375.1 1368076 1368426 R COG: COG0853; Pfam: PF02261; InterPro: IPR003190; aspartate 1-decarboxylase complement(1368076..1368426) Helicobacter pylori 83 12366187 YP_005785935.1 CDS clpA NC_017375.1 1368416 1370638 R COG: COG0542; Pfam: PF02861,PF00004,PF07724; InterPro: IPR003593; ATP-dependent C1p protease complement(1368416..1370638) Helicobacter pylori 83 12366188 YP_005785936.1 CDS clpS NC_017375.1 1370638 1370931 R COG: COG2127; Pfam: PF02617; InterPro: IPR014719; ATP-dependent Clp protease adaptor protein ClpS complement(1370638..1370931) Helicobacter pylori 83 12366189 YP_005785937.1 CDS HMPREF0462_1371 NC_017375.1 1370933 1371346 R Pfam: PF00582; InterPro: IPR006016; hypothetical protein complement(1370933..1371346) Helicobacter pylori 83 12366190 YP_005785938.1 CDS HMPREF0462_1372 NC_017375.1 1371455 1373221 D hypothetical protein 1371455..1373221 Helicobacter pylori 83 12366191 YP_005785939.1 CDS bioD NC_017375.1 1373225 1373881 D COG: COG0132; InterPro: IPR004472; dethiobiotin synthetase 1373225..1373881 Helicobacter pylori 83 12366192 YP_005785940.1 CDS HMPREF0462_1374 NC_017375.1 1373858 1374391 R Pfam: PF07509; InterPro: IPR011088; hypothetical protein complement(1373858..1374391) Helicobacter pylori 83 12366193 YP_005785941.1 CDS icd NC_017375.1 1374456 1375733 R COG: COG0538; Pfam: PF00180; InterPro: IPR004439; isocitrate dehydrogenase complement(1374456..1375733) Helicobacter pylori 83 12366194 YP_005785942.1 CDS gltA NC_017375.1 1375930 1377210 D COG: COG0372; Pfam: PF00285; InterPro: IPR010953; citrate (Si)-synthase 1375930..1377210 Helicobacter pylori 83 12366195 YP_005785943.1 CDS HMPREF0462_1377 NC_017375.1 1377145 1377399 R hypothetical protein complement(1377145..1377399) Helicobacter pylori 83 12366196 YP_005785944.1 CDS HMPREF0462_1378 NC_017375.1 1377640 1377765 R hypothetical protein complement(1377640..1377765) Helicobacter pylori 83 12366197 YP_005785945.1 CDS bioB NC_017375.1 1377893 1378744 D COG: COG0502; Pfam: PF04055,PF06968; InterPro: IPR013785; biotin synthase 1377893..1378744 Helicobacter pylori 83 12366198 YP_005785946.1 CDS yihY NC_017375.1 1378744 1379610 D COG: COG1295; Pfam: PF03631; InterPro: IPR004664; YihY family protein 1378744..1379610 Helicobacter pylori 83 12366199 YP_005785947.1 CDS HMPREF0462_1381 NC_017375.1 1379715 1379897 R hypothetical protein complement(1379715..1379897) Helicobacter pylori 83 12366200 YP_005785948.1 CDS HMPREF0462_1382 NC_017375.1 1383476 1383640 R hypothetical protein complement(1383476..1383640) Helicobacter pylori 83 12366204 YP_005785949.1 CDS HMPREF0462_1383 NC_017375.1 1384260 1386005 D Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 1384260..1386005 Helicobacter pylori 83 12366205 YP_005785950.1 CDS HMPREF0462_1384 NC_017375.1 1386046 1386435 D COG: COG0608; Pfam: PF01368; hypothetical protein 1386046..1386435 Helicobacter pylori 83 12366206 YP_005785951.1 CDS HMPREF0462_1385 NC_017375.1 1386487 1387299 D COG: COG0608; hypothetical protein 1386487..1387299 Helicobacter pylori 83 12366207 YP_005785952.1 CDS HMPREF0462_1386 NC_017375.1 1387344 1387826 D hypothetical protein 1387344..1387826 Helicobacter pylori 83 12366208 YP_005785953.1 CDS HMPREF0462_1387 NC_017375.1 1388223 1388582 D hypothetical protein 1388223..1388582 Helicobacter pylori 83 12366209 YP_005785954.1 CDS HMPREF0462_1388 NC_017375.1 1388674 1389195 D hypothetical protein 1388674..1389195 Helicobacter pylori 83 12366211 YP_005785955.1 CDS HMPREF0462_1389 NC_017375.1 1389167 1389292 R hypothetical protein complement(1389167..1389292) Helicobacter pylori 83 12366213 YP_005785956.1 CDS HMPREF0462_1390 NC_017375.1 1389304 1390224 D hypothetical protein 1389304..1390224 Helicobacter pylori 83 12366215 YP_005785957.1 CDS queF NC_017375.1 1390366 1390806 R COG: COG0780; Pfam: PF01227; InterPro: IPR001474; preQ(1) synthase complement(1390366..1390806) Helicobacter pylori 83 12366216 YP_005785958.1 CDS HMPREF0462_1392 NC_017375.1 1390865 1391206 D COG: COG0799; Pfam: PF02410; InterPro: IPR004394; iojap family protein 1390865..1391206 Helicobacter pylori 83 12366217 YP_005785959.1 CDS miaA NC_017375.1 1391277 1392107 D COG: COG0324; Pfam: PF01715; InterPro: IPR002627; tRNA delta(2)-isopentenylpyrophosphate transferase 1391277..1392107 Helicobacter pylori 83 12366218 YP_005785960.1 CDS rfaJ4 NC_017375.1 1392112 1393215 D COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide 1,2-glucosyltransferase 1392112..1393215 Helicobacter pylori 83 12366219 YP_005785961.1 CDS HMPREF0462_1395 NC_017375.1 1393337 1394053 D Pfam: PF00884; hypothetical protein 1393337..1394053 Helicobacter pylori 83 12366220 YP_005785962.1 CDS HMPREF0462_1396 NC_017375.1 1394035 1394886 D COG: COG2194; Pfam: PF00884; InterPro: IPR000917; hypothetical protein 1394035..1394886 Helicobacter pylori 83 12366221 YP_005785963.1 CDS murB NC_017375.1 1394931 1395710 R COG: COG0812; Pfam: PF02873; InterPro: IPR003170; UDP-N-acetylmuramate dehydrogenase complement(1394931..1395710) Helicobacter pylori 83 12366222 YP_005785964.1 CDS fliQ NC_017375.1 1395714 1395980 R COG: COG1987; Pfam: PF01313; InterPro: IPR006305; flagellar biosynthetic protein FliQ complement(1395714..1395980) Helicobacter pylori 83 12366223 YP_005785965.1 CDS fliI NC_017375.1 1395991 1397295 R COG: COG1157; Pfam: PF00006; InterPro: IPR005714; flagellar protein export ATPase FliI complement(1395991..1397295) Helicobacter pylori 83 12366224 YP_005785966.1 CDS trbB NC_017375.1 1397296 1398210 R COG: COG0630; Pfam: PF00437; InterPro: IPR001482; conjugative transfer protein TrbB complement(1397296..1398210) Helicobacter pylori 83 12366225 YP_005785967.1 CDS ileS NC_017375.1 1398227 1400989 R COG: COG0060; Pfam: PF00133,PF08264,PF06827; InterPro: IPR002301; isoleucine--tRNA ligase complement(1398227..1400989) Helicobacter pylori 83 12366226 YP_005785968.1 CDS HMPREF0462_1402 NC_017375.1 1401022 1401279 R COG: COG1188; Pfam: PF01479; InterPro: IPR002942; S4 domain-containing protein complement(1401022..1401279) Helicobacter pylori 83 12366227 YP_005785969.1 CDS HMPREF0462_1403 NC_017375.1 1401381 1402001 D hypothetical protein 1401381..1402001 Helicobacter pylori 83 12366228 YP_005785970.1 CDS HMPREF0462_1404 NC_017375.1 1402296 1402529 R hypothetical protein complement(1402296..1402529) Helicobacter pylori 83 12366229 YP_005785971.1 CDS HMPREF0462_1405 NC_017375.1 1402713 1403786 R COG: COG0820; Pfam: PF04055; InterPro: IPR004383; cfr family radical SAM enzyme complement(1402713..1403786) Helicobacter pylori 83 12366230 YP_005785972.1 CDS kdsD NC_017375.1 1403783 1404766 R COG: COG0794; Pfam: PF01380,PF00571; InterPro: IPR004800; arabinose-5-phosphate isomerase complement(1403783..1404766) Helicobacter pylori 83 12366231 YP_005785973.1 CDS HMPREF0462_1407 NC_017375.1 1404756 1406867 R COG: COG0595; Pfam: PF00753,PF07521; InterPro: IPR004613; ribonuclease J complement(1404756..1406867) Helicobacter pylori 83 12366232 YP_005785974.1 CDS ksgA NC_017375.1 1406901 1407716 R COG: COG0030; Pfam: PF00398; InterPro: IPR001737; dimethyladenosine transferase complement(1406901..1407716) Helicobacter pylori 83 12366233 YP_005785975.1 CDS HMPREF0462_1409 NC_017375.1 1407805 1407933 R hypothetical protein complement(1407805..1407933) Helicobacter pylori 83 12366234 YP_005785976.1 CDS HMPREF0462_1410 NC_017375.1 1407970 1408182 D histidine and glutamine-rich protein 1407970..1408182 Helicobacter pylori 83 12366235 YP_005785977.1 CDS HMPREF0462_1411 NC_017375.1 1408809 1409651 R hypothetical protein complement(1408809..1409651) Helicobacter pylori 83 12366236 YP_005785978.1 CDS HMPREF0462_1412 NC_017375.1 1409672 1411264 R hypothetical protein complement(1409672..1411264) Helicobacter pylori 83 12366237 YP_005785979.1 CDS purU NC_017375.1 1411265 1412152 R COG: COG0788; Pfam: PF01842,PF00551; InterPro: IPR004810; formyltetrahydrofolate deformylase complement(1411265..1412152) Helicobacter pylori 83 12366238 YP_005785980.1 CDS sppA NC_017375.1 1412149 1413027 R COG: COG0616; Pfam: PF01343; InterPro: IPR004635; signal peptide peptidase SppA complement(1412149..1413027) Helicobacter pylori 83 12366239 YP_005785981.1 CDS HMPREF0462_1415 NC_017375.1 1413098 1413346 D hypothetical protein 1413098..1413346 Helicobacter pylori 83 12366240 YP_005785982.1 CDS HMPREF0462_1416 NC_017375.1 1413555 1414136 D hypothetical protein 1413555..1414136 Helicobacter pylori 83 12366241 YP_005785983.1 CDS HMPREF0462_1417 NC_017375.1 1414300 1414785 D hypothetical protein 1414300..1414785 Helicobacter pylori 83 12366242 YP_005785984.1 CDS HMPREF0462_1418 NC_017375.1 1414789 1415163 D hypothetical protein 1414789..1415163 Helicobacter pylori 83 12366243 YP_005785985.1 CDS HMPREF0462_1419 NC_017375.1 1415574 1415924 R hypothetical protein complement(1415574..1415924) Helicobacter pylori 83 12366244 YP_005785986.1 CDS HMPREF0462_1420 NC_017375.1 1418143 1418865 R hypothetical protein complement(1418143..1418865) Helicobacter pylori 83 12366246 YP_005785987.1 CDS ppiB NC_017375.1 1419043 1419534 D COG: COG0652; Pfam: PF00160; InterPro: IPR002130; peptidyl-prolyl cis-trans isomerase 1419043..1419534 Helicobacter pylori 83 12366247 YP_005785988.1 CDS csrA NC_017375.1 1419552 1419782 D COG: COG1551; Pfam: PF02599; InterPro: IPR003751; carbon storage regulator 1419552..1419782 Helicobacter pylori 83 12366248 YP_005785989.1 CDS ispE NC_017375.1 1419779 1420585 D COG: COG1947; Pfam: PF00288; InterPro: IPR004424; 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase 1419779..1420585 Helicobacter pylori 83 12366249 YP_005785990.1 CDS smpB NC_017375.1 1420582 1421040 D COG: COG0691; Pfam: PF01668; InterPro: IPR000037; SsrA-binding protein 1420582..1421040 Helicobacter pylori 83 12366250 YP_005785991.1 CDS exbB3 NC_017375.1 1421043 1421495 D COG: COG0811; Pfam: PF01618; InterPro: IPR002898; TonB-system energizer ExbB 1421043..1421495 Helicobacter pylori 83 12366251 YP_005785992.1 CDS exbD NC_017375.1 1421506 1421907 D COG: COG0848; Pfam: PF02472; InterPro: IPR003400; biopolymer transporter 1421506..1421907 Helicobacter pylori 83 12366252 YP_005785993.1 CDS rnpA NC_017375.1 1422073 1422558 D COG: COG0594; Pfam: PF00825; InterPro: IPR014721; ribonuclease P protein component 1422073..1422558 Helicobacter pylori 83 12366253 YP_005785994.1 CDS HMPREF0462_1428 NC_017375.1 1422545 1422901 D COG: COG0759; Pfam: PF01809; InterPro: IPR002696; hypothetical protein 1422545..1422901 Helicobacter pylori 83 12366255 YP_005785995.1 CDS oxaA NC_017375.1 1422907 1424547 D COG: COG0706; Pfam: PF02096; InterPro: IPR001708; inner membrane protein OxaA 1422907..1424547 Helicobacter pylori 83 12366256 YP_005785996.1 CDS HMPREF0462_1430 NC_017375.1 1424547 1425341 D hypothetical protein 1424547..1425341 Helicobacter pylori 83 12366257 YP_005785997.1 CDS trmE NC_017375.1 1425334 1426686 D COG: COG0486; Pfam: PF01926; InterPro: IPR004520; tRNA modification GTPase TrmE 1425334..1426686 Helicobacter pylori 83 12366258 YP_005785998.1 CDS homD2 NC_017375.1 1426892 1429126 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomD 1426892..1429126 Helicobacter pylori 83 12366259 YP_005785999.1 CDS HMPREF0462_1433 NC_017375.1 1429215 1429343 D sensor histidine kinase 1429215..1429343 Helicobacter pylori 83 12366260 YP_005786000.1 CDS HMPREF0462_1434 NC_017375.1 1429623 1429769 D hypothetical protein 1429623..1429769 Helicobacter pylori 83 12366261 YP_005786001.1 CDS HMPREF0462_1435 NC_017375.1 1429796 1430707 R hypothetical protein complement(1429796..1430707) Helicobacter pylori 83 12366262 YP_005786002.1 CDS HMPREF0462_1436 NC_017375.1 1430717 1431058 R hypothetical protein complement(1430717..1431058) Helicobacter pylori 83 12366263 YP_005786003.1 CDS HMPREF0462_1437 NC_017375.1 1431065 1431592 R Pfam: PF02169; InterPro: IPR002217; LPP20 lipoprotein complement(1431065..1431592) Helicobacter pylori 83 12366264 YP_005786004.1 CDS HMPREF0462_1438 NC_017375.1 1431616 1432248 R COG: COG3417; InterPro: IPR014094; hypothetical protein complement(1431616..1432248) Helicobacter pylori 83 12366265 YP_005786005.1 CDS HMPREF0462_1439 NC_017375.1 1432605 1432919 R COG: COG0526; Pfam: PF00085; InterPro: IPR012335; thioredoxin complement(1432605..1432919) Helicobacter pylori 83 12366266 YP_005786006.1 CDS yciL NC_017375.1 1432974 1433762 R COG: COG1187; Pfam: PF01479,PF00849; InterPro: IPR000748; RNA pseudouridine synthase complement(1432974..1433762) Helicobacter pylori 83 12366267 YP_005786007.1 CDS dnaE NC_017375.1 1433744 1437409 R COG: COG0587; Pfam: PF02811,PF07733,PF01336; InterPro: IPR004805; DNA-directed DNA polymerase III subunit alpha complement(1433744..1437409) Helicobacter pylori 83 12366268 YP_005786008.1 CDS ccpA NC_017375.1 1437527 1438579 D COG: COG1858; Pfam: PF03150; InterPro: IPR004852; cytochrome c551 peroxidase 1437527..1438579 Helicobacter pylori 83 12366269 YP_005786009.1 CDS HMPREF0462_1443 NC_017375.1 1438971 1439558 R Pfam: PF03724; InterPro: IPR005184; secreted protein complement(1438971..1439558) Helicobacter pylori 83 12366270 YP_005786010.1 CDS HMPREF0462_1444 NC_017375.1 1439577 1440254 R hypothetical protein complement(1439577..1440254) Helicobacter pylori 83 12366271 YP_005786011.1 CDS HMPREF0462_1445 NC_017375.1 1440257 1441072 R Pfam: PF02470; InterPro: IPR003399; ABC superfamily ATP binding cassette transporter substrate binding protein complement(1440257..1441072) Helicobacter pylori 83 12366272 YP_005786012.1 CDS HMPREF0462_1446 NC_017375.1 1441057 1441845 R COG: COG1127; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter ABC protein complement(1441057..1441845) Helicobacter pylori 83 12366273 YP_005786013.1 CDS HMPREF0462_1447 NC_017375.1 1441842 1442975 R COG: COG0767; Pfam: PF02405; InterPro: IPR003453; ABC superfamily ATP binding cassette transporter permease complement(1441842..1442975) Helicobacter pylori 83 12366274 YP_005786014.1 CDS HMPREF0462_1448 NC_017375.1 1443109 1443804 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1443109..1443804 Helicobacter pylori 83 12366275 YP_005786015.1 CDS ilvE2 NC_017375.1 1443809 1444831 R COG: COG0115; Pfam: PF01063; InterPro: IPR001544; branched-chain-amino-acid transaminase complement(1443809..1444831) Helicobacter pylori 83 12366276 YP_005786016.1 CDS HMPREF0462_1450 NC_017375.1 1444882 1445628 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(1444882..1445628) Helicobacter pylori 83 12366277 YP_005786017.1 CDS polA NC_017375.1 1445743 1448424 R COG: COG0749; Pfam: PF02739,PF01367,PF00476; InterPro: IPR002298; DNA-directed DNA polymerase I complement(1445743..1448424) Helicobacter pylori 83 12366278 YP_005786018.1 CDS HMPREF0462_1452 NC_017375.1 1448717 1448956 D hypothetical protein 1448717..1448956 Helicobacter pylori 83 12366279 YP_005786019.1 CDS HMPREF0462_1453 NC_017375.1 1448953 1449960 D COG: COG3392; Pfam: PF02086; InterPro: IPR012327; modification methylase FokI 1448953..1449960 Helicobacter pylori 83 12366280 YP_005786020.1 CDS HMPREF0462_1454 NC_017375.1 1449964 1451103 D Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase domain protein 1449964..1451103 Helicobacter pylori 83 12366281 YP_005786021.1 CDS HMPREF0462_1455 NC_017375.1 1451447 1452625 D hypothetical protein 1451447..1452625 Helicobacter pylori 83 12366282 YP_005786022.1 CDS HMPREF0462_1456 NC_017375.1 1452647 1453222 R COG: COG1040; Pfam: PF00156; HP1473-transformation associated protein complement(1452647..1453222) Helicobacter pylori 83 12366283 YP_005786023.1 CDS tmk NC_017375.1 1453210 1453785 R COG: COG0125; Pfam: PF02223; InterPro: IPR000062; thymidylate kinase complement(1453210..1453785) Helicobacter pylori 83 12366284 YP_005786024.1 CDS coaD NC_017375.1 1453787 1454275 R COG: COG0669; Pfam: PF01467; InterPro: IPR001980; pantetheine-phosphate adenylyltransferase complement(1453787..1454275) Helicobacter pylori 83 12366285 YP_005786025.1 CDS ubiD NC_017375.1 1454260 1454823 R COG: COG0163; Pfam: PF02441; InterPro: IPR003382; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase complement(1454260..1454823) Helicobacter pylori 83 12366286 YP_005786026.1 CDS flgA NC_017375.1 1454833 1455489 R COG: COG1261; flagellar basal body P-ring biosynthesis protein FlgA complement(1454833..1455489) Helicobacter pylori 83 12366287 YP_005786027.1 CDS uvrD NC_017375.1 1455486 1457531 R COG: COG0210; Pfam: PF00580; InterPro: IPR000212; excision endonuclease subunit UvrD complement(1455486..1457531) Helicobacter pylori 83 12366288 YP_005786028.1 CDS HMPREF0462_1462 NC_017375.1 1457531 1460071 R COG: COG0457; Pfam: PF00515,PF07719; InterPro: IPR011990; hypothetical protein complement(1457531..1460071) Helicobacter pylori 83 12366289 YP_005786029.1 CDS serS NC_017375.1 1460081 1461328 R COG: COG0172; Pfam: PF02403,PF00587; InterPro: IPR002317; serine--tRNA ligase complement(1460081..1461328) Helicobacter pylori 83 12366290 YP_005786030.1 CDS HMPREF0462_1464 NC_017375.1 1461329 1462126 R COG: COG0388; InterPro: IPR003010; hypothetical protein complement(1461329..1462126) Helicobacter pylori 83 12366291 YP_005786031.1 CDS xseB NC_017375.1 1462130 1462390 R InterPro: IPR003761; exodeoxyribonuclease VII small subunit complement(1462130..1462390) Helicobacter pylori 83 12366292 YP_005786032.1 CDS ubiE NC_017375.1 1462400 1463140 R COG: COG2226; Pfam: PF01209; InterPro: IPR004033; ubiquinone/menaquinone biosynthesis methyltransferase complement(1462400..1463140) Helicobacter pylori 83 12366293 YP_005786033.1 CDS HMPREF0462_1467 NC_017375.1 1463167 1463613 R COG: COG1981; Pfam: PF03653; InterPro: IPR005265; integral membrane protein complement(1463167..1463613) Helicobacter pylori 83 12366294 YP_005786034.1 CDS HMPREF0462_1468 NC_017375.1 1463624 1464196 R COG: COG1739; Pfam: PF01205; InterPro: IPR015796; hypothetical protein complement(1463624..1464196) Helicobacter pylori 83 12366295 YP_005786035.1 CDS HMPREF0462_1469 NC_017375.1 1464183 1465313 R COG: COG0842; Pfam: PF01061; hypothetical protein complement(1464183..1465313) Helicobacter pylori 83 12366296 YP_005786036.1 CDS HMPREF0462_1470 NC_017375.1 1465310 1466407 R COG: COG0842; hypothetical protein complement(1465310..1466407) Helicobacter pylori 83 12366297 YP_005786037.1 CDS HMPREF0462_1471 NC_017375.1 1466419 1467408 R COG: COG0845; Pfam: PF00529; InterPro: IPR006143; hypothetical protein complement(1466419..1467408) Helicobacter pylori 83 12366298 YP_005786038.1 CDS HMPREF0462_1472 NC_017375.1 1467420 1468952 R COG: COG1538; Pfam: PF02321; InterPro: IPR003423; lipase family protein complement(1467420..1468952) Helicobacter pylori 83 12366299 YP_005786039.1 CDS HMPREF0462_1473 NC_017375.1 1468949 1470298 R COG: COG1253; Pfam: PF01595,PF00571,PF03471; InterPro: IPR002550; hypothetical protein complement(1468949..1470298) Helicobacter pylori 83 12366300 YP_005786040.1 CDS HMPREF0462_1474 NC_017375.1 1470398 1472044 R COG: COG0306; Pfam: PF01384; InterPro: IPR001204; phosphate permease complement(1470398..1472044) Helicobacter pylori 83 12366301 YP_005786041.1 CDS HMPREF0462_1475 NC_017375.1 1472140 1472409 D COG: COG0694; Pfam: PF01106; InterPro: IPR001075; NifU family protein 1472140..1472409 Helicobacter pylori 83 12366302 YP_005786042.1 CDS HMPREF0462_1476 NC_017375.1 1472421 1473032 D hypothetical protein 1472421..1473032 Helicobacter pylori 83 12366303 YP_005786043.1 CDS murE NC_017375.1 1473036 1474379 D COG: COG0769; Pfam: PF08245,PF02875; InterPro: IPR005761; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1473036..1474379 Helicobacter pylori 83 12366304 YP_005786044.1 CDS tal NC_017375.1 1474383 1475333 D COG: COG0176; Pfam: PF00923; InterPro: IPR004732; transaldolase 1474383..1475333 Helicobacter pylori 83 12366305 YP_005786045.1 CDS rplY NC_017375.1 1475388 1475924 D COG: COG1825; Pfam: PF01386; InterPro: IPR001021; 50S ribosomal protein L25 1475388..1475924 Helicobacter pylori 83 12366306 YP_005786046.1 CDS pth NC_017375.1 1475934 1476494 D COG: COG0193; Pfam: PF01195; InterPro: IPR001328; aminoacyl-tRNA hydrolase 1475934..1476494 Helicobacter pylori 83 12366307 YP_005786047.1 CDS HMPREF0462_1481 NC_017375.1 1476549 1477616 D COG: COG0795; Pfam: PF03739; InterPro: IPR005495; hypothetical protein 1476549..1477616 Helicobacter pylori 83 12366308 YP_005786048.1 CDS HMPREF0462_1482 NC_017375.1 1477673 1478674 D COG: COG3392; Pfam: PF02086; InterPro: IPR012327; type II methylase 1477673..1478674 Helicobacter pylori 83 12366309 YP_005786049.1 CDS dam NC_017375.1 1478671 1479201 D COG: COG0338; Pfam: PF02086; DNA adenine methylase 1478671..1479201 Helicobacter pylori 83 12366310 YP_005786050.1 CDS dam2 NC_017375.1 1479207 1479569 D DNA adenine methylase 1479207..1479569 Helicobacter pylori 83 12366311 YP_005786051.1 CDS HMPREF0462_1485 NC_017375.1 1479576 1480148 D restriction endonuclease 1479576..1480148 Helicobacter pylori 83 12366312 YP_005786052.1 CDS HMPREF0462_1486 NC_017375.1 1480409 1481188 D restriction endonuclease 1480409..1481188 Helicobacter pylori 83 12366313 YP_005786053.1 CDS HMPREF0462_1487 NC_017375.1 1481217 1482368 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(1481217..1482368) Helicobacter pylori 83 12366314 YP_005786054.1 CDS HMPREF0462_1488 NC_017375.1 1482545 1483000 D COG: COG3399; Pfam: PF04323; InterPro: IPR007418; hypothetical protein 1482545..1483000 Helicobacter pylori 83 12366315 YP_005786055.1 CDS HMPREF0462_1489 NC_017375.1 1482997 1485375 R COG: COG2217; Pfam: PF00403,PF00122,PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase copper transporter complement(1482997..1485375) Helicobacter pylori 83 12366316 YP_005786056.1 CDS HMPREF0462_1490 NC_017375.1 1485401 1486117 R COG: COG4123; Pfam: PF08242; methyltransferase complement(1485401..1486117) Helicobacter pylori 83 12366317 YP_005786057.1 CDS ribD NC_017375.1 1486099 1487133 R Pfam: PF00383; InterPro: IPR004794; riboflavin biosynthesis protein RibD complement(1486099..1487133) Helicobacter pylori 83 12366318 YP_005786058.1 CDS gltS NC_017375.1 1487130 1488356 R COG: COG0786; Pfam: PF03616; InterPro: IPR004445; ESS family glutamate:sodium (Na+) symporter complement(1487130..1488356) Helicobacter pylori 83 12366319 YP_005786059.1 CDS lys NC_017375.1 1488443 1489642 D COG: COG1748; Pfam: PF03435; InterPro: IPR005097; saccharopine dehydrogenase 1488443..1489642 Helicobacter pylori 83 12366320 YP_005786060.1 CDS ccoG NC_017375.1 1489652 1491028 R COG: COG0348; Pfam: PF00037; InterPro: IPR014116; cytochrome c oxidase accessory protein CcoG complement(1489652..1491028) Helicobacter pylori 83 12366321 YP_005786061.1 CDS plsY NC_017375.1 1491008 1491796 D COG: COG0344; Pfam: PF02660; InterPro: IPR003811; acyl-phosphate glycerol 3-phosphate acyltransferase 1491008..1491796 Helicobacter pylori 83 12366322 YP_005786062.1 CDS folB NC_017375.1 1491793 1492146 D Pfam: PF02152; InterPro: IPR006157; dihydroneopterin aldolase 1491793..1492146 Helicobacter pylori 83 12366323 YP_005786063.1 CDS HMPREF0462_1497 NC_017375.1 1492130 1492456 D COG: COG1629; FrpB family protein 1492130..1492456 Helicobacter pylori 83 12366324 YP_005786064.1 CDS frpB3 NC_017375.1 1492624 1495215 D COG: COG1629; Pfam: PF07715,PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 1492624..1495215 Helicobacter pylori 83 12366325 YP_005786065.1 CDS selA NC_017375.1 1495443 1496603 D COG: COG1921; Pfam: PF03841; InterPro: IPR004534; L-seryl-tRNA(Sec) selenium transferase 1495443..1496603 Helicobacter pylori 83 12366326 YP_005786066.1 CDS nusA NC_017375.1 1496691 1497878 D COG: COG0195; InterPro: IPR010213; transcription termination factor NusA 1496691..1497878 Helicobacter pylori 83 12366327 YP_005786067.1 CDS HMPREF0462_1501 NC_017375.1 1498187 1501960 R COG: COG1002; Pfam: PF07669; type II restriction-modification enzyme complement(1498187..1501960) Helicobacter pylori 83 12366328 YP_005786068.1 CDS HMPREF0462_1502 NC_017375.1 1502086 1502544 R hypothetical protein complement(1502086..1502544) Helicobacter pylori 83 12366329 YP_005786069.1 CDS HMPREF0462_1503 NC_017375.1 1502519 1503685 R hypothetical protein complement(1502519..1503685) Helicobacter pylori 83 12366330 YP_005786070.1 CDS HMPREF0462_1504 NC_017375.1 1503717 1504001 R hypothetical protein complement(1503717..1504001) Helicobacter pylori 83 12366331 YP_005786071.1 CDS HMPREF0462_1505 NC_017375.1 1504086 1504448 R COG: COG1192; PARA protein complement(1504086..1504448) Helicobacter pylori 83 12366332 YP_005786072.1 CDS HMPREF0462_1506 NC_017375.1 1504445 1504741 R PARA protein complement(1504445..1504741) Helicobacter pylori 83 12366333 YP_005786073.1 CDS HMPREF0462_1507 NC_017375.1 1504994 1513411 R COG: COG4646; Pfam: PF02384,PF04851,PF00271; InterPro: IPR014001; DNA methylase complement(1504994..1513411) Helicobacter pylori 83 12366334 YP_005786074.1 CDS HMPREF0462_1508 NC_017375.1 1513566 1514603 D hypothetical protein 1513566..1514603 Helicobacter pylori 83 12366335 YP_005786075.1 CDS HMPREF0462_1509 NC_017375.1 1514604 1515998 D hypothetical protein 1514604..1515998 Helicobacter pylori 83 12366336 YP_005786076.1 CDS HMPREF0462_1510 NC_017375.1 1516042 1517544 D hypothetical protein 1516042..1517544 Helicobacter pylori 83 12366337 YP_005786077.1 CDS HMPREF0462_1511 NC_017375.1 1517584 1518234 D hypothetical protein 1517584..1518234 Helicobacter pylori 83 12366338 YP_005786078.1 CDS HMPREF0462_1512 NC_017375.1 1518238 1519623 D hypothetical protein 1518238..1519623 Helicobacter pylori 83 12366339 YP_005786079.1 CDS HMPREF0462_1513 NC_017375.1 1519623 1520825 D hypothetical protein 1519623..1520825 Helicobacter pylori 83 12366340 YP_005786080.1 CDS xerD2 NC_017375.1 1520887 1521963 R COG: COG0582; Pfam: PF00589; InterPro: IPR013762; integrase/recombinase complement(1520887..1521963) Helicobacter pylori 83 12366341 YP_005786081.1 CDS HMPREF0462_1515 NC_017375.1 1522227 1522604 R hypothetical protein complement(1522227..1522604) Helicobacter pylori 83 12366342 YP_005786082.1 CDS HMPREF0462_1516 NC_017375.1 1522640 1523317 R hypothetical protein complement(1522640..1523317) Helicobacter pylori 83 12366343 YP_005786083.1 CDS res NC_017375.1 1523380 1526295 R COG: COG3587; Pfam: PF04851; type III restriction enzyme R protein complement(1523380..1526295) Helicobacter pylori 83 12366344 YP_005786084.1 CDS HMPREF0462_1518 NC_017375.1 1526298 1526879 R COG: COG2189; hypothetical protein complement(1526298..1526879) Helicobacter pylori 83 12366345 YP_005786085.1 CDS HMPREF0462_1519 NC_017375.1 1526876 1528255 R COG: COG2189; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase complement(1526876..1528255) Helicobacter pylori 83 12366346 YP_005786086.1 CDS recG NC_017375.1 1528298 1530163 R COG: COG1200; Pfam: PF00270,PF00271; InterPro: IPR004609; DNA helicase RecG complement(1528298..1530163) Helicobacter pylori 83 12366347 YP_005786087.1 CDS HMPREF0462_1521 NC_017375.1 1530245 1530598 D hypothetical protein 1530245..1530598 Helicobacter pylori 83 12366348 YP_005786088.1 CDS horD2 NC_017375.1 1530602 1531237 D Pfam: PF01856; InterPro: IPR002718; outer membrane protein HorD 1530602..1531237 Helicobacter pylori 83 12366349 YP_005786089.1 CDS xthA NC_017375.1 1531234 1531986 R COG: COG0708; Pfam: PF03372; InterPro: IPR004808; exodeoxyribonuclease III complement(1531234..1531986) Helicobacter pylori 83 12366350 YP_005786090.1 CDS HMPREF0462_1524 NC_017375.1 1532164 1533603 R periplasmic competence protein complement(1532164..1533603) Helicobacter pylori 83 12366352 YP_005786091.1 CDS HMPREF0462_1525 NC_017375.1 1533687 1533830 R hypothetical protein complement(1533687..1533830) Helicobacter pylori 83 12366353 YP_005786092.1 CDS dnaA NC_017375.1 1533823 1535190 R COG: COG0593; Pfam: PF00308,PF08299; InterPro: IPR001957; DNA-directed DNA replication initiator protein complement(1533823..1535190) Helicobacter pylori 83 12366354 YP_005786093.1 CDS punB NC_017375.1 1535342 1535878 D purine nucleoside phosphorylase 1535342..1535878 Helicobacter pylori 83 12366355 YP_005786094.1 CDS HMPREF0462_1528 NC_017375.1 1535925 1536164 D hypothetical protein 1535925..1536164 Helicobacter pylori 83 12366356 YP_005786095.1 CDS glmS NC_017375.1 1536165 1537958 D COG: COG0449; Pfam: PF00310,PF01380; InterPro: IPR005855; glutamine-fructose-6-phosphate transaminase 1536165..1537958 Helicobacter pylori 83 12366357 YP_005786096.1 CDS thyX NC_017375.1 1537909 1538607 D COG: COG1351; Pfam: PF02511; InterPro: IPR003669; thymidylate synthase 1537909..1538607 Helicobacter pylori 83 12366358 YP_005786097.1 CDS hsdS_3a NC_017375.1 1538950 1539489 R COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I R-M system specificity subunit complement(1538950..1539489) Helicobacter pylori 83 12366359 YP_005786098.1 CDS HMPREF0462_1532 NC_017375.1 1539477 1540253 R hypothetical protein complement(1539477..1540253) Helicobacter pylori 83 12366360 YP_005786099.1 CDS HMPREF0462_1533 NC_017375.1 1540341 1542803 R COG: COG0286; Pfam: PF02384; InterPro: IPR004546; type I restriction enzyme M protein complement(1540341..1542803) Helicobacter pylori 83 12366361 YP_005786100.1 CDS hsdR4 NC_017375.1 1542873 1545848 D COG: COG0610; Pfam: PF04313,PF04851; InterPro: IPR004473; type I restriction enzyme R protein 1542873..1545848 Helicobacter pylori 83 12366362 YP_005786101.1 CDS phnI NC_017375.1 1545848 1546555 D COG: COG1451; Pfam: PF01863; InterPro: IPR002725; phosphonate metabolism protein PhnI 1545848..1546555 Helicobacter pylori 83 12366363 YP_005786102.1 CDS fecA3 NC_017375.1 1546645 1549227 R COG: COG4772; Pfam: PF07715,PF00593; InterPro: IPR000531; iron(III) dicitrate transporter complement(1546645..1549227) Helicobacter pylori 83 12366364 YP_005786103.1 CDS HMPREF0462_1537 NC_017375.1 1549294 1549431 R hypothetical protein complement(1549294..1549431) Helicobacter pylori 83 12366365 YP_005786104.1 CDS rocF NC_017375.1 1549656 1550624 R COG: COG0010; Pfam: PF00491; InterPro: IPR014033; arginase complement(1549656..1550624) Helicobacter pylori 83 12366366 YP_005786105.1 CDS ald NC_017375.1 1550828 1551970 D COG: COG0686; Pfam: PF05222,PF01262; InterPro: IPR007698; alanine dehydrogenase 1550828..1551970 Helicobacter pylori 83 12366367 YP_005786106.1 CDS HMPREF0462_1540 NC_017375.1 1552093 1553847 D Pfam: PF03235,PF07510; InterPro: IPR004919; hypothetical protein 1552093..1553847 Helicobacter pylori 83 12366368 YP_005786107.1 CDS HMPREF0462_1541 NC_017375.1 1553857 1554585 R Pfam: PF01856; InterPro: IPR002718; outer membrane protein complement(1553857..1554585) Helicobacter pylori 83 12366369 YP_005786108.1 CDS ppnK NC_017375.1 1554770 1555624 D COG: COG0061; Pfam: PF01513; InterPro: IPR002504; NAD(+) kinase 1554770..1555624 Helicobacter pylori 83 12366370 YP_005786109.1 CDS recN NC_017375.1 1555637 1557211 D COG: COG0497; Pfam: PF02463; DNA repair protein RecN 1555637..1557211 Helicobacter pylori 83 12366371 YP_005786110.1 CDS HMPREF0462_1544 NC_017375.1 1557208 1558515 D COG: COG1293; Pfam: PF05670; InterPro: IPR008532; fibronectin/fibrinogen-binding protein 1557208..1558515 Helicobacter pylori 83 12366372 YP_005786111.1 CDS HMPREF0462_1545 NC_017375.1 1558534 1558830 D hypothetical protein 1558534..1558830 Helicobacter pylori 83 12366373 YP_005786112.1 CDS HMPREF0462_1546 NC_017375.1 1559080 1559649 D hypothetical protein 1559080..1559649 Helicobacter pylori 83 12366374 YP_005786113.1 CDS HMPREF0462_1547 NC_017375.1 1559627 1559971 R hypothetical protein complement(1559627..1559971) Helicobacter pylori 83 12366375 YP_005786114.1 CDS HMPREF0462_1548 NC_017375.1 1559973 1560443 R hypothetical protein complement(1559973..1560443) Helicobacter pylori 83 12366376 YP_005786115.1 CDS dnaQ NC_017375.1 1560882 1561745 R COG: COG0847; Pfam: PF00929; InterPro: IPR006054; DNA-directed DNA polymerase III subunit epsilon complement(1560882..1561745) Helicobacter pylori 83 12366377 YP_005786116.1 CDS rpe NC_017375.1 1561723 1562376 R COG: COG0036; Pfam: PF00834; InterPro: IPR013785; ribulose-phosphate 3-epimerase complement(1561723..1562376) Helicobacter pylori 83 12366378 YP_005786117.1 CDS fbp NC_017375.1 1562447 1563319 D COG: COG0158; Pfam: PF00316; InterPro: IPR000146; fructose-1,6-bisphosphatase 1562447..1563319 Helicobacter pylori 83 12366379 YP_005786118.1 CDS HMPREF0462_1552 NC_017375.1 1563316 1563522 D hypothetical protein 1563316..1563522 Helicobacter pylori 83 12366380 YP_005786119.1 CDS HMPREF0462_1553 NC_017375.1 1563535 1564431 D type II methylase protein 1563535..1564431 Helicobacter pylori 83 12366381 YP_005786120.1 CDS HMPREF0462_1554 NC_017375.1 1564424 1565137 D hypothetical protein 1564424..1565137 Helicobacter pylori 83 12366382 YP_005786121.1 CDS dcm2 NC_017375.1 1565344 1566600 R Pfam: PF00145; InterPro: IPR001525; site-specific DNA-methyltransferase complement(1565344..1566600) Helicobacter pylori 83 12366383 YP_005786122.1 CDS HMPREF0462_1556 NC_017375.1 1566590 1567354 R hypothetical protein complement(1566590..1567354) Helicobacter pylori 83 12366384 YP_005786123.1 CDS HMPREF0462_1557 NC_017375.1 1567413 1567688 R hypothetical protein complement(1567413..1567688) Helicobacter pylori 83 12366385 YP_005786124.1 CDS tsf NC_017375.1 1567726 1568793 R COG: COG0264; Pfam: PF00627,PF00889; InterPro: IPR001816; elongation factor EF1B complement(1567726..1568793) Helicobacter pylori 83 12366386 YP_005786125.1 CDS rpsB NC_017375.1 1568793 1569671 R COG: COG0052; Pfam: PF00318; InterPro: IPR005706; 30S ribosomal protein S2 complement(1568793..1569671) Helicobacter pylori 83 12366387 YP_005786126.1 CDS HMPREF0462_1560 NC_017375.1 1569838 1572654 D COG: COG1074; Pfam: PF00580; InterPro: IPR000212; helicase 1569838..1572654 Helicobacter pylori 83 12366388 YP_005786127.1 CDS nhaA NC_017375.1 1572645 1573994 D COG: COG3004; Pfam: PF06965; InterPro: IPR004670; NhaA family sodium:proton (Na+:H+) antiporter 1572645..1573994 Helicobacter pylori 83 12366389 YP_005786128.1 CDS yajC NC_017375.1 1574042 1574335 D COG: COG1862; Pfam: PF02699; InterPro: IPR003849; preprotein translocase 1574042..1574335 Helicobacter pylori 83 12366390 YP_005786129.1 CDS secD NC_017375.1 1574335 1575912 D COG: COG0342; Pfam: PF07549,PF02355; InterPro: IPR005791; protein-export membrane protein SecD 1574335..1575912 Helicobacter pylori 83 12366391 YP_005786130.1 CDS secF NC_017375.1 1575921 1576892 D COG: COG0341; Pfam: PF07549,PF02355; InterPro: IPR005665; protein-export membrane protein SecF 1575921..1576892 Helicobacter pylori 83 12366392 YP_005786131.1 CDS HMPREF0462_1565 NC_017375.1 1576902 1577240 D hypothetical protein 1576902..1577240 Helicobacter pylori 83 12366393 YP_005786132.1 CDS leuS NC_017375.1 1577250 1579235 D COG: COG0495; Pfam: PF00133; InterPro: IPR002302; leucyl-tRNA synthetase 1577250..1579235 Helicobacter pylori 83 12366394 YP_005786133.1 CDS leuS2 NC_017375.1 1579304 1579669 D COG: COG0495; InterPro: IPR002302; leucyl-tRNA synthetase 1579304..1579669 Helicobacter pylori 83 12366395 YP_005786134.1 CDS HMPREF0462_1568 NC_017375.1 1579666 1580178 D hypothetical protein 1579666..1580178 Helicobacter pylori 83 12366396 YP_005786135.1 CDS folC NC_017375.1 1580168 1581343 D COG: COG0285; Pfam: PF08245; InterPro: IPR001645; tetrahydrofolate synthase 1580168..1581343 Helicobacter pylori 83 12366397 YP_005786136.1 CDS tagE NC_017375.1 1581343 1582269 D COG: COG0739; Pfam: PF01551; InterPro: IPR002886; ToxR-activated protein 1581343..1582269 Helicobacter pylori 83 12366398 YP_005786137.1 CDS tagE2 NC_017375.1 1582305 1583213 D COG: COG0739; Pfam: PF01551; InterPro: IPR002886; ToxR-activated protein 1582305..1583213 Helicobacter pylori 83 12366399 YP_005786138.1 CDS HMPREF0462_1572 NC_017375.1 1583132 1583542 D COG: COG1664; Pfam: PF04519; InterPro: IPR007607; hypothetical protein 1583132..1583542 Helicobacter pylori 83 12366400 YP_005786139.1 CDS trcF NC_017375.1 1583566 1586565 D COG: COG1197; Pfam: PF02559,PF00270,PF00271,PF03461; InterPro: IPR004576; transcription-repair coupling factor 1583566..1586565 Helicobacter pylori 83 12366401 YP_005786140.1 CDS petA NC_017375.1 1586689 1587192 D COG: COG0723; Pfam: PF00355; InterPro: IPR006317; ubiquinol-cytochrome c reductase 1586689..1587192 Helicobacter pylori 83 12366402 YP_005786141.1 CDS petB NC_017375.1 1587203 1588441 D COG: COG1290; Pfam: PF00033,PF00032; InterPro: IPR016175; ubiquinol-cytochrome c reductase 1587203..1588441 Helicobacter pylori 83 12366403 YP_005786142.1 CDS fbcC NC_017375.1 1588438 1589295 D COG: COG2857; Pfam: PF00034,PF02167; ubiquinol-cytochrome c reductase cytochrome c1 subunit 1588438..1589295 Helicobacter pylori 83 12366404 YP_005786143.1 CDS HMPREF0462_1577 NC_017375.1 1589379 1589681 D hypothetical protein 1589379..1589681 Helicobacter pylori 83 12366405 YP_005786144.1 CDS HMPREF0462_1578 NC_017375.1 1589720 1590466 D COG: COG2194; Pfam: PF00884; InterPro: IPR000917; hypothetical protein 1589720..1590466 Helicobacter pylori 83 12366406 YP_005786145.1 CDS HMPREF0462_1579 NC_017375.1 1590495 1590884 D COG: COG2194; Pfam: PF00884; InterPro: IPR000917; metal-dependent hydrolase fragment 2 1590495..1590884 Helicobacter pylori 83 12366407 YP_005786146.1 CDS HMPREF0462_1580 NC_017375.1 1590881 1591030 D hypothetical protein 1590881..1591030 Helicobacter pylori 83 12366408 YP_005786147.1 CDS ftsI NC_017375.1 1591236 1593083 R COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460; cell division protein FtsI complement(1591236..1593083) Helicobacter pylori 83 12366409 YP_005786148.1 CDS fliE NC_017375.1 1593233 1593562 R COG: COG1677; Pfam: PF02049; InterPro: IPR001624; flagellar hook-basal body complex protein FliE complement(1593233..1593562) Helicobacter pylori 83 12366410 YP_005786149.1 CDS flgC NC_017375.1 1593690 1594175 R COG: COG1558; Pfam: PF00460,PF06429; InterPro: IPR006299; flagellar basal-body rod protein FlgC complement(1593690..1594175) Helicobacter pylori 83 12366411 YP_005786150.1 CDS flgB NC_017375.1 1594188 1594610 R COG: COG1815; Pfam: PF00460; InterPro: IPR006300; flagellar basal-body rod protein FlgB complement(1594188..1594610) Helicobacter pylori 83 12366412 YP_005786151.1 CDS ftsW NC_017375.1 1594833 1595999 D COG: COG0772; Pfam: PF01098; InterPro: IPR001182; FtsW/RodA/SpoVE family cell division protein 1594833..1595999 Helicobacter pylori 83 12366413 YP_005786152.1 CDS ceuE NC_017375.1 1596023 1597024 R COG: COG0614; Pfam: PF01497; iron(III) ABC superfamily ATP binding cassette transporter complement(1596023..1597024) Helicobacter pylori 83 12366414 YP_005786153.1 CDS tsaA NC_017375.1 1597224 1597859 D COG: COG0450; Pfam: PF00578; InterPro: IPR012335; peroxiredoxin 1597224..1597859 Helicobacter pylori 83 12366415 YP_005786154.1 CDS metQ NC_017375.1 1598003 1598818 D COG: COG1464; Pfam: PF03180; InterPro: IPR004872; D-methionine ABC superfamily ATP binding cassette transporter, binding protein 1598003..1598818 Helicobacter pylori 83 12366416 YP_005786155.1 CDS mrdA NC_017375.1 1598886 1600661 R COG: COG0768; Pfam: PF03717,PF00905; InterPro: IPR001460; penicillin-binding protein 2 complement(1598886..1600661) Helicobacter pylori 83 12366417 YP_005786156.1 CDS HMPREF0462_1590 NC_017375.1 1600642 1601085 R hypothetical protein complement(1600642..1601085) Helicobacter pylori 83 12366418 YP_005786157.1 CDS ysxC NC_017375.1 1601098 1601724 R COG: COG0218; Pfam: PF01926; InterPro: IPR002917; ribosome biogenesis GTP-binding protein YsxC complement(1601098..1601724) Helicobacter pylori 83 12366419 YP_005786158.1 CDS lptA NC_017375.1 1601721 1602278 R COG: COG1934; Pfam: PF03968; InterPro: IPR005653; lipopolysaccharide ABC superfamily ATP binding cassette transporter, permease protein complement(1601721..1602278) Helicobacter pylori 83 12366420 YP_005786159.1 CDS HMPREF0462_1593 NC_017375.1 1602278 1602871 R hypothetical protein complement(1602278..1602871) Helicobacter pylori 83 12366421 YP_005786160.1 CDS kdsC NC_017375.1 1602846 1603340 R COG: COG1778; Pfam: PF08282; InterPro: IPR010023; 3-deoxy-manno-octulosonate-8-phosphatase complement(1602846..1603340) Helicobacter pylori 83 12366422 YP_005786161.1 CDS rlpA NC_017375.1 1603337 1604284 R COG: COG0797; Pfam: PF03330,PF05036; InterPro: IPR012997; rare lipoprotein A complement(1603337..1604284) Helicobacter pylori 83 12366423 YP_005786162.1 CDS dniR NC_017375.1 1604284 1605411 R COG: COG0741; Pfam: PF01464,PF01476; InterPro: IPR008258; regulatory protein DniR complement(1604284..1605411) Helicobacter pylori 83 12366424 YP_005786163.1 CDS HMPREF0462_1597 NC_017375.1 1605497 1606261 R COG: COG0084; Pfam: PF01026; InterPro: IPR015991; TatD family hydrolase complement(1605497..1606261) Helicobacter pylori 83 12366425 YP_005786164.1 CDS ribE NC_017375.1 1606336 1606956 D COG: COG0307; Pfam: PF00677; InterPro: IPR001783; riboflavin synthase subunit alpha 1606336..1606956 Helicobacter pylori 83 12366426 YP_005786165.1 CDS HMPREF0462_1599 NC_017375.1 1606957 1607229 D COG: COG2257; Pfam: PF01312; InterPro: IPR004683; FlhB domain-containing protein 1606957..1607229 Helicobacter pylori 83 12366427 YP_005786166.1 CDS metN NC_017375.1 1607251 1608234 D COG: COG1135; Pfam: PF00005,PF08352; InterPro: IPR003593; D-methionine ABC superfamily ATP binding cassette transporter, ABC protein 1607251..1608234 Helicobacter pylori 83 12366428 YP_005786167.1 CDS HMPREF0462_1601 NC_017375.1 1608236 1608883 D COG: COG2011; Pfam: PF00528; metal ion ABC superfamily ATP binding cassette transporter, membrane protein 1608236..1608883 Helicobacter pylori 83 12366429 YP_005786168.1 CDS HMPREF0462_1602 NC_017375.1 1609072 1609503 R hypothetical protein complement(1609072..1609503) Helicobacter pylori 83 12366430 YP_005786169.1 CDS HMPREF0462_1603 NC_017375.1 1609513 1610109 R Pfam: PF01569; InterPro: IPR000326; hypothetical protein complement(1609513..1610109) Helicobacter pylori 83 12366431 YP_005786170.1 CDS llm NC_017375.1 1610106 1611002 R COG: COG0472; Pfam: PF00953; InterPro: IPR000715; methicillin resistance protein complement(1610106..1611002) Helicobacter pylori 83 12366432 YP_005786171.1 CDS pdxJ NC_017375.1 1611253 1612041 D COG: COG0854; Pfam: PF03740; InterPro: IPR013785; pyridoxine 5'-phosphate synthase 1611253..1612041 Helicobacter pylori 83 12366433 YP_005786172.1 CDS pdxA NC_017375.1 1612043 1612966 D COG: COG1995; Pfam: PF04166; InterPro: IPR005255; 4-hydroxythreonine-4-phosphate dehydrogenase 1612043..1612966 Helicobacter pylori 83 12366434 YP_005786173.1 CDS gcp NC_017375.1 1613029 1614051 D COG: COG0533; Pfam: PF00814; InterPro: IPR000905; O-sialoglycoprotein endopeptidase 1613029..1614051 Helicobacter pylori 83 12366435 YP_005786174.1 CDS HMPREF0462_1608 NC_017375.1 1614712 1614840 D hypothetical protein 1614712..1614840 Helicobacter pylori 83 12366436 YP_005786175.1 CDS flgG2 NC_017375.1 1614934 1615722 D COG: COG4786; Pfam: PF00460,PF06429; InterPro: IPR012834; flagellar basal-body rod protein FlgG 1614934..1615722 Helicobacter pylori 83 12366437 YP_005786176.1 CDS HMPREF0462_1610 NC_017375.1 1616409 1617170 R COG: COG4735; Pfam: PF03667; InterPro: IPR005367; hypothetical protein complement(1616409..1617170) Helicobacter pylori 83 12366438 HMPREF0462_t0001 tRNA HMPREF0462_t0001 NC_017375.1 4044 4119 R tRNA-Glu complement(4044..4119) Helicobacter pylori 83 12366212 HMPREF0462_t0002 tRNA HMPREF0462_t0002 NC_017375.1 4183 4259 R tRNA-Asp complement(4183..4259) Helicobacter pylori 83 12366214 HMPREF0462_t0003 tRNA HMPREF0462_t0003 NC_017375.1 4300 4375 R tRNA-Val complement(4300..4375) Helicobacter pylori 83 12366254 HMPREF0462_t0004 tRNA HMPREF0462_t0004 NC_017375.1 4417 4491 R tRNA-Glu complement(4417..4491) Helicobacter pylori 83 12364783 HMPREF0462_t0005 tRNA HMPREF0462_t0005 NC_017375.1 4502 4577 R tRNA-Lys complement(4502..4577) Helicobacter pylori 83 12364784 HMPREF0462_t0006 tRNA HMPREF0462_t0006 NC_017375.1 116126 116201 R tRNA-Val complement(116126..116201) Helicobacter pylori 83 12364904 HMPREF0462_t0007 tRNA HMPREF0462_t0007 NC_017375.1 134220 134311 D tRNA-Ser 134220..134311 Helicobacter pylori 83 12364924 HMPREF0462_t0008 tRNA HMPREF0462_t0008 NC_017375.1 271942 272016 R tRNA-Asn complement(271942..272016) Helicobacter pylori 83 12365064 HMPREF0462_t0009 tRNA HMPREF0462_t0009 NC_017375.1 294665 294740 R tRNA-Ala complement(294665..294740) Helicobacter pylori 83 12365088 HMPREF0462_t0010 tRNA HMPREF0462_t0010 NC_017375.1 376532 376608 D tRNA-Arg 376532..376608 Helicobacter pylori 83 12365171 HMPREF0462_t0011 tRNA HMPREF0462_t0011 NC_017375.1 428736 428823 R tRNA-Ser complement(428736..428823) Helicobacter pylori 83 12365225 HMPREF0462_t0012 tRNA HMPREF0462_t0012 NC_017375.1 481761 481838 R tRNA-Pro complement(481761..481838) Helicobacter pylori 83 12365283 HMPREF0462_t0013 tRNA HMPREF0462_t0013 NC_017375.1 554471 554547 R tRNA-Arg complement(554471..554547) Helicobacter pylori 83 12365357 HMPREF0462_t0014 tRNA HMPREF0462_t0014 NC_017375.1 644662 644738 D tRNA-Met 644662..644738 Helicobacter pylori 83 12365456 HMPREF0462_t0015 tRNA HMPREF0462_t0015 NC_017375.1 940661 940737 R tRNA-Met complement(940661..940737) Helicobacter pylori 83 12365735 HMPREF0462_t0016 tRNA HMPREF0462_t0016 NC_017375.1 940768 940842 R tRNA-Gln complement(940768..940842) Helicobacter pylori 83 12365736 HMPREF0462_t0017 tRNA HMPREF0462_t0017 NC_017375.1 997934 998008 D tRNA-Gly 997934..998008 Helicobacter pylori 83 12365788 HMPREF0462_t0018 tRNA HMPREF0462_t0018 NC_017375.1 998404 998490 D tRNA-Leu 998404..998490 Helicobacter pylori 83 12365790 HMPREF0462_t0019 tRNA HMPREF0462_t0019 NC_017375.1 998565 998639 D tRNA-Cys 998565..998639 Helicobacter pylori 83 12365791 HMPREF0462_t0020 tRNA HMPREF0462_t0020 NC_017375.1 998685 998772 D tRNA-Ser 998685..998772 Helicobacter pylori 83 12365792 HMPREF0462_t0021 tRNA HMPREF0462_t0021 NC_017375.1 1056675 1056751 R tRNA-Arg complement(1056675..1056751) Helicobacter pylori 83 12365853 HMPREF0462_t0022 tRNA HMPREF0462_t0022 NC_017375.1 1056769 1056845 R tRNA-Arg complement(1056769..1056845) Helicobacter pylori 83 12365854 HMPREF0462_t0023 tRNA HMPREF0462_t0023 NC_017375.1 1056905 1056981 R tRNA-His complement(1056905..1056981) Helicobacter pylori 83 12365855 HMPREF0462_t0024 tRNA HMPREF0462_t0024 NC_017375.1 1057049 1057126 R tRNA-Pro complement(1057049..1057126) Helicobacter pylori 83 12365856 HMPREF0462_t0025 tRNA HMPREF0462_t0025 NC_017375.1 1107088 1107172 R tRNA-Leu complement(1107088..1107172) Helicobacter pylori 83 12365905 HMPREF0462_t0026 tRNA HMPREF0462_t0026 NC_017375.1 1111955 1112031 D tRNA-Ile 1111955..1112031 Helicobacter pylori 83 12365911 HMPREF0462_t0027 tRNA HMPREF0462_t0027 NC_017375.1 1112047 1112122 D tRNA-Ala 1112047..1112122 Helicobacter pylori 83 12365912 HMPREF0462_t0028 tRNA HMPREF0462_t0028 NC_017375.1 1203440 1203517 R tRNA-Met complement(1203440..1203517) Helicobacter pylori 83 12366000 HMPREF0462_t0029 tRNA HMPREF0462_t0029 NC_017375.1 1232042 1232117 R tRNA-Trp complement(1232042..1232117) Helicobacter pylori 83 12366023 HMPREF0462_t0030 tRNA HMPREF0462_t0030 NC_017375.1 1233675 1233749 R tRNA-Thr complement(1233675..1233749) Helicobacter pylori 83 12366026 HMPREF0462_t0031 tRNA HMPREF0462_t0031 NC_017375.1 1233780 1233856 R tRNA-Gly complement(1233780..1233856) Helicobacter pylori 83 12366027 HMPREF0462_t0032 tRNA HMPREF0462_t0032 NC_017375.1 1233872 1233956 R tRNA-Tyr complement(1233872..1233956) Helicobacter pylori 83 12366028 HMPREF0462_t0033 tRNA HMPREF0462_t0033 NC_017375.1 1233984 1234059 R tRNA-Thr complement(1233984..1234059) Helicobacter pylori 83 12366029 HMPREF0462_t0034 tRNA HMPREF0462_t0034 NC_017375.1 1239347 1239433 R tRNA-Leu complement(1239347..1239433) Helicobacter pylori 83 12366039 HMPREF0462_t0035 tRNA HMPREF0462_t0035 NC_017375.1 1239487 1239573 R tRNA-Leu complement(1239487..1239573) Helicobacter pylori 83 12366041 HMPREF0462_t0036 tRNA HMPREF0462_t0036 NC_017375.1 1532086 1532161 D tRNA-Phe 1532086..1532161 Helicobacter pylori 83 12366351 HMPREF0462_r0001 rRNA HMPREF0462_r0001 NC_017375.1 1035323 1035438 R 5S ribosomal RNA complement(1035323..1035438) Helicobacter pylori 83 12365833 HMPREF0462_r0002 rRNA HMPREF0462_r0002 NC_017375.1 1035672 1038556 R 23S ribosomal RNA complement(1035672..1038556) Helicobacter pylori 83 12365834 HMPREF0462_r0003 rRNA HMPREF0462_r0003 NC_017375.1 1160563 1162055 R 16S ribosomal RNA complement(1160563..1162055) Helicobacter pylori 83 12365960 HMPREF0462_r0004 rRNA HMPREF0462_r0004 NC_017375.1 1379985 1380100 R 5S ribosomal RNA complement(1379985..1380100) Helicobacter pylori 83 12366201 HMPREF0462_r0005 rRNA HMPREF0462_r0005 NC_017375.1 1380334 1383218 R 23S ribosomal RNA complement(1380334..1383218) Helicobacter pylori 83 12366202 HMPREF0462_r0006 rRNA HMPREF0462_r0006 NC_017375.1 1416154 1417646 R 16S ribosomal RNA complement(1416154..1417646) Helicobacter pylori 83 12366245