-- dump date 20140619_112642 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_005769168.1 384895179 12348457 183..302 1 NC_017360.1 hypothetical protein 302 12348457 HMPREF4655_20002 Helicobacter pylori 35A hypothetical protein YP_005769168.1 183 D 585535 CDS YP_005769169.1 384895180 12348459 326..1225 1 NC_017360.1 hypothetical protein 1225 12348459 HMPREF4655_20003 Helicobacter pylori 35A hypothetical protein YP_005769169.1 326 D 585535 CDS YP_005769170.1 384895181 12348461 1233..1367 1 NC_017360.1 hypothetical protein 1367 12348461 HMPREF4655_20004 Helicobacter pylori 35A hypothetical protein YP_005769170.1 1233 D 585535 CDS YP_005769171.1 384895182 12348463 complement(1336..1776) 1 NC_017360.1 COG: COG0780; Pfam: PF01227; InterPro: IPR001474; PreQ(1) synthase 1776 queF 12348463 queF Helicobacter pylori 35A PreQ(1) synthase YP_005769171.1 1336 R 585535 CDS YP_005769172.1 384895183 12348471 1835..2176 1 NC_017360.1 COG: COG0799; Pfam: PF02410; InterPro: IPR004394; iojap family protein 2176 12348471 HMPREF4655_20006 Helicobacter pylori 35A iojap family protein YP_005769172.1 1835 D 585535 CDS YP_005769173.1 384895184 12348473 2139..3077 1 NC_017360.1 COG: COG0324; Pfam: PF01715; InterPro: IPR002627; tRNA isopentenyltransferase 3077 miaA 12348473 miaA Helicobacter pylori 35A tRNA isopentenyltransferase YP_005769173.1 2139 D 585535 CDS YP_005769174.1 384895185 12348634 3082..4191 1 NC_017360.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide 1,2-glucosyltransferase 4191 rfaJ 12348634 rfaJ Helicobacter pylori 35A lipopolysaccharide 1,2-glucosyltransferase YP_005769174.1 3082 D 585535 CDS YP_005769175.1 384895186 12348635 complement(4202..5164) 1 NC_017360.1 site-specific DNA-methyltransferase (adenine-specific) 5164 ecoRIM 12348635 ecoRIM Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005769175.1 4202 R 585535 CDS YP_005769176.1 384895187 12348636 complement(5145..5999) 1 NC_017360.1 Pfam: PF02963; InterPro: IPR011336; type II site-specific deoxyribonuclease 5999 ecoRIR 12348636 ecoRIR Helicobacter pylori 35A type II site-specific deoxyribonuclease YP_005769176.1 5145 R 585535 CDS YP_005769177.1 384895188 12348637 complement(6003..6782) 1 NC_017360.1 COG: COG0812; Pfam: PF02873; InterPro: IPR003170; UDP-N-acetylmuramate dehydrogenase 6782 murB 12348637 murB Helicobacter pylori 35A UDP-N-acetylmuramate dehydrogenase YP_005769177.1 6003 R 585535 CDS YP_005769178.1 384895189 12348638 complement(6786..7052) 1 NC_017360.1 COG: COG1987; Pfam: PF01313; InterPro: IPR006305; flagellar biosynthetic protein FliQ 7052 fliQ 12348638 fliQ Helicobacter pylori 35A flagellar biosynthetic protein FliQ YP_005769178.1 6786 R 585535 CDS YP_005769179.1 384895190 12348639 complement(7063..8367) 1 NC_017360.1 COG: COG1157; Pfam: PF00006; InterPro: IPR005714; H(+)-transporting two-sector ATPase 8367 fliI 12348639 fliI Helicobacter pylori 35A H(+)-transporting two-sector ATPase YP_005769179.1 7063 R 585535 CDS YP_005769180.1 384895191 12348640 complement(8368..9282) 1 NC_017360.1 COG: COG0630; Pfam: PF00437; InterPro: IPR001482; conjugative transfer protein TrbB 9282 trbB 12348640 trbB Helicobacter pylori 35A conjugative transfer protein TrbB YP_005769180.1 8368 R 585535 CDS YP_005769181.1 384895192 12348641 complement(9298..12060) 1 NC_017360.1 COG: COG0060; Pfam: PF00133, PF08264, PF06827; InterPro: IPR002301; isoleucine--tRNA ligase 12060 ileS 12348641 ileS Helicobacter pylori 35A isoleucine--tRNA ligase YP_005769181.1 9298 R 585535 CDS YP_005769182.1 384895193 12348642 complement(12093..12350) 1 NC_017360.1 COG: COG1188; Pfam: PF01479; S4 domain-containing protein 12350 12348642 HMPREF4655_20016 Helicobacter pylori 35A S4 domain-containing protein YP_005769182.1 12093 R 585535 CDS YP_005769183.1 384895194 12348643 12452..13072 1 NC_017360.1 hypothetical protein 13072 12348643 HMPREF4655_20017 Helicobacter pylori 35A hypothetical protein YP_005769183.1 12452 D 585535 CDS YP_005769184.1 384895195 12348644 complement(13366..13599) 1 NC_017360.1 hypothetical protein 13599 12348644 HMPREF4655_20018 Helicobacter pylori 35A hypothetical protein YP_005769184.1 13366 R 585535 CDS YP_005769185.1 384895196 12348645 complement(13806..14879) 1 NC_017360.1 COG: COG0820; Pfam: PF04055; InterPro: IPR004383; Fe-S-cluster redox protein 14879 12348645 HMPREF4655_20019 Helicobacter pylori 35A Fe-S-cluster redox protein YP_005769185.1 13806 R 585535 CDS YP_005769186.1 384895197 12348646 complement(14876..15859) 1 NC_017360.1 COG: COG0794; Pfam: PF01380, PF00571; InterPro: IPR004800; arabinose-5-phosphate isomerase 15859 kdsD 12348646 kdsD Helicobacter pylori 35A arabinose-5-phosphate isomerase YP_005769186.1 14876 R 585535 CDS YP_005769187.1 384895198 12348647 complement(15849..17933) 1 NC_017360.1 COG: COG0595; Pfam: PF00753, PF07521; InterPro: IPR004613; metallo-beta-lactamase 17933 12348647 HMPREF4655_20021 Helicobacter pylori 35A metallo-beta-lactamase YP_005769187.1 15849 R 585535 CDS YP_005769188.1 384895199 12348648 complement(17967..18782) 1 NC_017360.1 COG: COG0030; Pfam: PF00398; InterPro: IPR011530; dimethyladenosine transferase 18782 ksgA 12348648 ksgA Helicobacter pylori 35A dimethyladenosine transferase YP_005769188.1 17967 R 585535 CDS YP_005769189.1 384895200 12348649 19036..19245 1 NC_017360.1 histidine and glutamine-rich protein 19245 12348649 HMPREF4655_20023 Helicobacter pylori 35A histidine and glutamine-rich protein YP_005769189.1 19036 D 585535 CDS YP_005769190.1 384895201 12348650 complement(19407..19547) 1 NC_017360.1 CagY like protein 19547 12348650 HMPREF4655_20024 Helicobacter pylori 35A CagY like protein YP_005769190.1 19407 R 585535 CDS YP_005769191.1 384895202 12348651 complement(19669..19821) 1 NC_017360.1 hypothetical protein 19821 12348651 HMPREF4655_20025 Helicobacter pylori 35A hypothetical protein YP_005769191.1 19669 R 585535 CDS YP_005769192.1 384895203 12348652 complement(19878..22325) 1 NC_017360.1 hypothetical protein 22325 12348652 HMPREF4655_20026 Helicobacter pylori 35A hypothetical protein YP_005769192.1 19878 R 585535 CDS YP_005769193.1 384895204 12348653 complement(22326..23207) 1 NC_017360.1 COG: COG0788; Pfam: PF01842, PF00551; InterPro: IPR004810; formyltetrahydrofolate deformylase 23207 purU 12348653 purU Helicobacter pylori 35A formyltetrahydrofolate deformylase YP_005769193.1 22326 R 585535 CDS YP_005769194.1 384895205 12348654 complement(23210..24088) 1 NC_017360.1 COG: COG0616; Pfam: PF01343; InterPro: IPR004635; signal peptide peptidase SppA 24088 sppA 12348654 sppA Helicobacter pylori 35A signal peptide peptidase SppA YP_005769194.1 23210 R 585535 CDS YP_005769195.1 384895206 12348655 24159..24419 1 NC_017360.1 hypothetical protein 24419 12348655 HMPREF4655_20029 Helicobacter pylori 35A hypothetical protein YP_005769195.1 24159 D 585535 CDS YP_005769196.1 384895207 12348656 complement(24416..24538) 1 NC_017360.1 hypothetical protein 24538 12348656 HMPREF4655_20030 Helicobacter pylori 35A hypothetical protein YP_005769196.1 24416 R 585535 CDS YP_005769197.1 384895208 12348657 24626..25192 1 NC_017360.1 hypothetical protein 25192 12348657 HMPREF4655_20031 Helicobacter pylori 35A hypothetical protein YP_005769197.1 24626 D 585535 CDS YP_005769198.1 384895209 12348658 25342..25833 1 NC_017360.1 hypothetical protein 25833 12348658 HMPREF4655_20032 Helicobacter pylori 35A hypothetical protein YP_005769198.1 25342 D 585535 CDS YP_005769199.1 384895210 12348659 25837..26301 1 NC_017360.1 hypothetical protein 26301 12348659 HMPREF4655_20033 Helicobacter pylori 35A hypothetical protein YP_005769199.1 25837 D 585535 CDS YP_005769200.1 384895211 12348660 complement(26707..26973) 1 NC_017360.1 hypothetical protein 26973 12348660 HMPREF4655_20034 Helicobacter pylori 35A hypothetical protein YP_005769200.1 26707 R 585535 CDS YP_005769201.1 384895212 12348662 complement(29193..29975) 1 NC_017360.1 hypothetical protein 29975 12348662 HMPREF4655_20035 Helicobacter pylori 35A hypothetical protein YP_005769201.1 29193 R 585535 CDS YP_005769202.1 384895213 12348663 30093..30584 1 NC_017360.1 COG: COG0652; Pfam: PF00160; InterPro: IPR002130; peptidyl-prolyl cis-trans isomerase 30584 ppiA 12348663 ppiA Helicobacter pylori 35A peptidyl-prolyl cis-trans isomerase YP_005769202.1 30093 D 585535 CDS YP_005769203.1 384895214 12348664 30602..30832 1 NC_017360.1 COG: COG1551; Pfam: PF02599; InterPro: IPR003751; carbon storage regulator 30832 csrA 12348664 csrA Helicobacter pylori 35A carbon storage regulator YP_005769203.1 30602 D 585535 CDS YP_005769204.1 384895215 12348665 30832..31635 1 NC_017360.1 COG: COG1947; Pfam: PF00288; InterPro: IPR004424; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 31635 ispE 12348665 ispE Helicobacter pylori 35A 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_005769204.1 30832 D 585535 CDS YP_005769205.1 384895216 12348666 31632..32090 1 NC_017360.1 COG: COG0691; Pfam: PF01668; InterPro: IPR000037; SsrA-binding protein 32090 smpB 12348666 smpB Helicobacter pylori 35A SsrA-binding protein YP_005769205.1 31632 D 585535 CDS YP_005769206.1 384895217 12348667 32093..32545 1 NC_017360.1 COG: COG0811; Pfam: PF01618; InterPro: IPR002898; TonB family auxiliary protein ExbB 32545 exbB 12348667 exbB Helicobacter pylori 35A TonB family auxiliary protein ExbB YP_005769206.1 32093 D 585535 CDS YP_005769207.1 384895218 12348668 32556..32957 1 NC_017360.1 COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TonB family auxiliary protein ExbD 32957 exbD 12348668 exbD Helicobacter pylori 35A TonB family auxiliary protein ExbD YP_005769207.1 32556 D 585535 CDS YP_005769208.1 384895219 12348669 33123..33608 1 NC_017360.1 COG: COG0594; Pfam: PF00825; InterPro: IPR014721; ribonuclease P 33608 rnpA 12348669 rnpA Helicobacter pylori 35A ribonuclease P YP_005769208.1 33123 D 585535 CDS YP_005769209.1 384895220 12348670 33595..33948 1 NC_017360.1 COG: COG0759; Pfam: PF01809; InterPro: IPR002696; hypothetical protein 33948 12348670 HMPREF4655_20043 Helicobacter pylori 35A hypothetical protein YP_005769209.1 33595 D 585535 CDS YP_005769210.1 384895221 12348671 33954..35594 1 NC_017360.1 COG: COG0706; Pfam: PF02096; InterPro: IPR001708; inner membrane protein OxaA 35594 oxaA 12348671 oxaA Helicobacter pylori 35A inner membrane protein OxaA YP_005769210.1 33954 D 585535 CDS YP_005769211.1 384895222 12348672 35594..36388 1 NC_017360.1 hypothetical protein 36388 12348672 HMPREF4655_20045 Helicobacter pylori 35A hypothetical protein YP_005769211.1 35594 D 585535 CDS YP_005769212.1 384895223 12348673 36381..37733 1 NC_017360.1 COG: COG0486; Pfam: PF01926; InterPro: IPR004520; tRNA modification GTPase TrmE 37733 trmE 12348673 trmE Helicobacter pylori 35A tRNA modification GTPase TrmE YP_005769212.1 36381 D 585535 CDS YP_005769213.1 384895224 12348674 37939..40173 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomD 40173 homD 12348674 homD Helicobacter pylori 35A outer membrane protein HomD YP_005769213.1 37939 D 585535 CDS YP_005769214.1 384895225 12348675 40267..40395 1 NC_017360.1 hypothetical protein 40395 12348675 HMPREF4655_20048 Helicobacter pylori 35A hypothetical protein YP_005769214.1 40267 D 585535 CDS YP_005769215.1 384895226 12348676 40675..40821 1 NC_017360.1 hypothetical protein 40821 12348676 HMPREF4655_20049 Helicobacter pylori 35A hypothetical protein YP_005769215.1 40675 D 585535 CDS YP_005769216.1 384895227 12348677 complement(40846..41757) 1 NC_017360.1 hypothetical protein 41757 12348677 HMPREF4655_20050 Helicobacter pylori 35A hypothetical protein YP_005769216.1 40846 R 585535 CDS YP_005769217.1 384895228 12348678 complement(41767..42108) 1 NC_017360.1 hypothetical protein 42108 12348678 HMPREF4655_20051 Helicobacter pylori 35A hypothetical protein YP_005769217.1 41767 R 585535 CDS YP_005769218.1 384895229 12348679 complement(42116..42643) 1 NC_017360.1 Pfam: PF02169; InterPro: IPR002217; LPP20 lipoprotein 42643 12348679 HMPREF4655_20052 Helicobacter pylori 35A LPP20 lipoprotein YP_005769218.1 42116 R 585535 CDS YP_005769219.1 384895230 12348680 complement(42667..43299) 1 NC_017360.1 COG: COG3417; InterPro: IPR014094; hypothetical protein 43299 12348680 HMPREF4655_20053 Helicobacter pylori 35A hypothetical protein YP_005769219.1 42667 R 585535 CDS YP_005769220.1 384895231 12348681 complement(43659..43973) 1 NC_017360.1 COG: COG0526; Pfam: PF00085; InterPro: IPR012335; thioredoxin 43973 12348681 HMPREF4655_20054 Helicobacter pylori 35A thioredoxin YP_005769220.1 43659 R 585535 CDS YP_005769221.1 384895232 12348682 complement(44028..44816) 1 NC_017360.1 COG: COG1187; Pfam: PF01479, PF00849; InterPro: IPR000748; RNA pseudouridine synthase 44816 yciL 12348682 yciL Helicobacter pylori 35A RNA pseudouridine synthase YP_005769221.1 44028 R 585535 CDS YP_005769222.1 384895233 12348683 complement(44798..48433) 1 NC_017360.1 COG: COG0587; Pfam: PF02811, PF07733, PF01336; InterPro: IPR004805; DNA-directed DNA polymerase III subunit alpha 48433 dnaE 12348683 dnaE Helicobacter pylori 35A DNA-directed DNA polymerase III subunit alpha YP_005769222.1 44798 R 585535 CDS YP_005769223.1 384895234 12348684 48582..49634 1 NC_017360.1 COG: COG1858; Pfam: PF03150; InterPro: IPR004852; cytochrome-c peroxidase 49634 ccpA 12348684 ccpA Helicobacter pylori 35A cytochrome-c peroxidase YP_005769223.1 48582 D 585535 CDS YP_005769224.1 384895235 12348685 complement(49816..50403) 1 NC_017360.1 Pfam: PF03724; InterPro: IPR005184; secreted protein 50403 12348685 HMPREF4655_20058 Helicobacter pylori 35A secreted protein YP_005769224.1 49816 R 585535 CDS YP_005769225.1 384895236 12348686 complement(50422..51099) 1 NC_017360.1 hypothetical protein 51099 12348686 HMPREF4655_20059 Helicobacter pylori 35A hypothetical protein YP_005769225.1 50422 R 585535 CDS YP_005769226.1 384895237 12348687 complement(51102..51917) 1 NC_017360.1 Pfam: PF02470; InterPro: IPR003399; ABC superfamily ATP binding cassette transporter substrate binding protein 51917 12348687 HMPREF4655_20060 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter substrate binding protein YP_005769226.1 51102 R 585535 CDS YP_005769227.1 384895238 12348688 complement(51902..52690) 1 NC_017360.1 COG: COG1127; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter ABC protein 52690 12348688 HMPREF4655_20061 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter ABC protein YP_005769227.1 51902 R 585535 CDS YP_005769228.1 384895239 12348689 complement(52687..53820) 1 NC_017360.1 COG: COG0767; Pfam: PF02405; InterPro: IPR003453; ABC superfamily ATP binding cassette transporter permease protein 53820 12348689 HMPREF4655_20062 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter permease protein YP_005769228.1 52687 R 585535 CDS YP_005769229.1 384895240 12348690 53954..54649 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 54649 12348690 HMPREF4655_20063 Helicobacter pylori 35A outer membrane protein YP_005769229.1 53954 D 585535 CDS YP_005769230.1 384895241 12348691 complement(54654..55676) 1 NC_017360.1 COG: COG0115; Pfam: PF01063; InterPro: IPR001544; branched-chain-amino-acid transaminase 55676 ilvE 12348691 ilvE Helicobacter pylori 35A branched-chain-amino-acid transaminase YP_005769230.1 54654 R 585535 CDS YP_005769231.1 384895242 12348692 complement(55727..56473) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 56473 12348692 HMPREF4655_20065 Helicobacter pylori 35A outer membrane protein YP_005769231.1 55727 R 585535 CDS YP_005769232.1 384895243 12348693 complement(56588..59269) 1 NC_017360.1 COG: COG0749; Pfam: PF02739, PF01367, PF00476; InterPro: IPR002298; DNA-directed DNA polymerase I 59269 polA 12348693 polA Helicobacter pylori 35A DNA-directed DNA polymerase I YP_005769232.1 56588 R 585535 CDS YP_005769233.1 384895244 12348696 complement(62618..63175) 1 NC_017360.1 COG: COG1040; Pfam: PF00156; transformation associated protein 63175 12348696 HMPREF4655_20071 Helicobacter pylori 35A transformation associated protein YP_005769233.1 62618 R 585535 CDS YP_005769234.1 384895245 12348697 complement(63181..63756) 1 NC_017360.1 COG: COG0125; Pfam: PF02223; InterPro: IPR000062; thymidylate kinase 63756 tmk 12348697 tmk Helicobacter pylori 35A thymidylate kinase YP_005769234.1 63181 R 585535 CDS YP_005769235.1 384895246 12348698 complement(63758..64231) 1 NC_017360.1 COG: COG0669; Pfam: PF01467; InterPro: IPR001980; pantetheine-phosphate adenylyltransferase 64231 coaD 12348698 coaD Helicobacter pylori 35A pantetheine-phosphate adenylyltransferase YP_005769235.1 63758 R 585535 CDS YP_005769236.1 384895247 12348699 complement(64231..64794) 1 NC_017360.1 COG: COG0163; Pfam: PF02441; InterPro: IPR003382; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 64794 12348699 HMPREF4655_20074 Helicobacter pylori 35A 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_005769236.1 64231 R 585535 CDS YP_005769237.1 384895248 12348700 complement(64804..65460) 1 NC_017360.1 flagellar basal body P-ring biosynthesis protein FlgA 65460 flgA 12348700 flgA Helicobacter pylori 35A flagellar basal body P-ring biosynthesis protein FlgA YP_005769237.1 64804 R 585535 CDS YP_005769238.1 384895249 12348701 complement(65457..67502) 1 NC_017360.1 COG: COG0210; Pfam: PF00580; InterPro: IPR000212; excision endonuclease subunit UvrD 67502 uvrD 12348701 uvrD Helicobacter pylori 35A excision endonuclease subunit UvrD YP_005769238.1 65457 R 585535 CDS YP_005769239.1 384895250 12348702 complement(67502..70042) 1 NC_017360.1 COG: COG0457; Pfam: PF00515, PF07719; InterPro: IPR011990; hypothetical protein 70042 12348702 HMPREF4655_20077 Helicobacter pylori 35A hypothetical protein YP_005769239.1 67502 R 585535 CDS YP_005769240.1 384895251 12348703 complement(70052..71299) 1 NC_017360.1 COG: COG0172; Pfam: PF02403, PF00587; InterPro: IPR002317; serine--tRNA ligase 71299 serS 12348703 serS Helicobacter pylori 35A serine--tRNA ligase YP_005769240.1 70052 R 585535 CDS YP_005769241.1 384895252 12348704 complement(71300..72097) 1 NC_017360.1 COG: COG0388; InterPro: IPR003010; hypothetical protein 72097 12348704 HMPREF4655_20079 Helicobacter pylori 35A hypothetical protein YP_005769241.1 71300 R 585535 CDS YP_005769242.1 384895253 12348705 complement(72101..72370) 1 NC_017360.1 InterPro: IPR003761; exodeoxyribonuclease VII small subunit 72370 xseB 12348705 xseB Helicobacter pylori 35A exodeoxyribonuclease VII small subunit YP_005769242.1 72101 R 585535 CDS YP_005769243.1 384895254 12348706 complement(72380..73180) 1 NC_017360.1 COG: COG2226; Pfam: PF01209; InterPro: IPR004033; ubiquinone/menaquinone biosynthesis methyltransferase 73180 ubiE 12348706 ubiE Helicobacter pylori 35A ubiquinone/menaquinone biosynthesis methyltransferase YP_005769243.1 72380 R 585535 CDS YP_005769244.1 384895255 12348707 complement(73164..73610) 1 NC_017360.1 COG: COG1981; Pfam: PF03653; InterPro: IPR005265; integral membrane protein 73610 12348707 HMPREF4655_20082 Helicobacter pylori 35A integral membrane protein YP_005769244.1 73164 R 585535 CDS YP_005769245.1 384895256 12348708 complement(73621..74193) 1 NC_017360.1 COG: COG1739; Pfam: PF01205; InterPro: IPR015796; hypothetical protein 74193 12348708 HMPREF4655_20083 Helicobacter pylori 35A hypothetical protein YP_005769245.1 73621 R 585535 CDS YP_005769246.1 384895257 12348709 complement(74180..75310) 1 NC_017360.1 COG: COG0842; Pfam: PF01061; ABC superfamily ATP binding cassette transporter permease protein 75310 12348709 HMPREF4655_20084 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter permease protein YP_005769246.1 74180 R 585535 CDS YP_005769247.1 384895258 12348710 complement(75307..76404) 1 NC_017360.1 COG: COG0842; hypothetical protein 76404 12348710 HMPREF4655_20085 Helicobacter pylori 35A hypothetical protein YP_005769247.1 75307 R 585535 CDS YP_005769248.1 384895259 12348711 complement(76416..77405) 1 NC_017360.1 COG: COG0845; Pfam: PF00529; InterPro: IPR006143; HlyD family secretion protein 77405 12348711 HMPREF4655_20086 Helicobacter pylori 35A HlyD family secretion protein YP_005769248.1 76416 R 585535 CDS YP_005769249.1 384895260 12348712 complement(77417..78949) 1 NC_017360.1 COG: COG1538; Pfam: PF02321; InterPro: IPR003423; lipase family protein 78949 12348712 HMPREF4655_20087 Helicobacter pylori 35A lipase family protein YP_005769249.1 77417 R 585535 CDS YP_005769250.1 384895261 12348713 complement(78946..80295) 1 NC_017360.1 COG: COG1253; Pfam: PF01595, PF00571, PF03471; InterPro: IPR002550; hypothetical protein 80295 12348713 HMPREF4655_20088 Helicobacter pylori 35A hypothetical protein YP_005769250.1 78946 R 585535 CDS YP_005769251.1 384895262 12348714 complement(80396..82042) 1 NC_017360.1 COG: COG0306; Pfam: PF01384; InterPro: IPR001204; phosphate permease 82042 12348714 HMPREF4655_20089 Helicobacter pylori 35A phosphate permease YP_005769251.1 80396 R 585535 CDS YP_005769252.1 384895263 12348715 82138..82407 1 NC_017360.1 COG: COG0694; Pfam: PF01106; InterPro: IPR001075; NifU family protein 82407 12348715 HMPREF4655_20090 Helicobacter pylori 35A NifU family protein YP_005769252.1 82138 D 585535 CDS YP_005769253.1 384895264 12348716 82419..83030 1 NC_017360.1 hypothetical protein 83030 12348716 HMPREF4655_20091 Helicobacter pylori 35A hypothetical protein YP_005769253.1 82419 D 585535 CDS YP_005769254.1 384895265 12348717 83034..84377 1 NC_017360.1 COG: COG0769; Pfam: PF08245, PF02875; InterPro: IPR005761; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 84377 murE 12348717 murE Helicobacter pylori 35A UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_005769254.1 83034 D 585535 CDS YP_005769255.1 384895266 12348718 84381..85331 1 NC_017360.1 COG: COG0176; Pfam: PF00923; InterPro: IPR004732; transaldolase 85331 tal 12348718 tal Helicobacter pylori 35A transaldolase YP_005769255.1 84381 D 585535 CDS YP_005769256.1 384895267 12348719 85386..85922 1 NC_017360.1 COG: COG1825; Pfam: PF01386; InterPro: IPR001021; 50S ribosomal protein L25 85922 rplY 12348719 rplY Helicobacter pylori 35A 50S ribosomal protein L25 YP_005769256.1 85386 D 585535 CDS YP_005769257.1 384895268 12348720 85933..86415 1 NC_017360.1 COG: COG0193; Pfam: PF01195; InterPro: IPR001328; aminoacyl-tRNA hydrolase 86415 pth 12348720 pth Helicobacter pylori 35A aminoacyl-tRNA hydrolase YP_005769257.1 85933 D 585535 CDS YP_005769258.1 384895269 12348721 86504..87571 1 NC_017360.1 COG: COG0795; Pfam: PF03739; InterPro: IPR005495; hypothetical protein 87571 12348721 HMPREF4655_20096 Helicobacter pylori 35A hypothetical protein YP_005769258.1 86504 D 585535 CDS YP_005769259.1 384895270 12348722 87680..88603 1 NC_017360.1 hypothetical protein 88603 12348722 HMPREF4655_20097 Helicobacter pylori 35A hypothetical protein YP_005769259.1 87680 D 585535 CDS YP_005769260.1 384895271 12348723 complement(88892..90043) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 90043 12348723 HMPREF4655_20098 Helicobacter pylori 35A outer membrane protein YP_005769260.1 88892 R 585535 CDS YP_005769261.1 384895272 12348724 90220..90675 1 NC_017360.1 COG: COG3399; Pfam: PF04323; InterPro: IPR007418; hypothetical protein 90675 12348724 HMPREF4655_20099 Helicobacter pylori 35A hypothetical protein YP_005769261.1 90220 D 585535 CDS YP_005769262.1 384895273 12348725 complement(90672..93023) 1 NC_017360.1 COG: COG2217; Pfam: PF00403, PF00122, PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase copper transporter 93023 12348725 HMPREF4655_20100 Helicobacter pylori 35A P-ATPase superfamily P-type ATPase copper transporter YP_005769262.1 90672 R 585535 CDS YP_005769263.1 384895274 12348726 complement(93049..93765) 1 NC_017360.1 COG: COG4123; Pfam: PF08242; methyltransferase 93765 12348726 HMPREF4655_20101 Helicobacter pylori 35A methyltransferase YP_005769263.1 93049 R 585535 CDS YP_005769264.1 384895275 12348727 complement(93747..94781) 1 NC_017360.1 Pfam: PF00383; InterPro: IPR004794; riboflavin biosynthesis protein RibD 94781 ribD 12348727 ribD Helicobacter pylori 35A riboflavin biosynthesis protein RibD YP_005769264.1 93747 R 585535 CDS YP_005769265.1 384895276 12348728 complement(94778..96025) 1 NC_017360.1 COG: COG0786; Pfam: PF03616; InterPro: IPR004445; ESS family glutamate:sodium (Na+) symporter 96025 gltS 12348728 gltS Helicobacter pylori 35A ESS family glutamate:sodium (Na+) symporter YP_005769265.1 94778 R 585535 CDS YP_005769266.1 384895277 12348729 96090..97289 1 NC_017360.1 COG: COG1748; Pfam: PF03435; InterPro: IPR005097; saccharopine dehydrogenase 97289 lys 12348729 lys Helicobacter pylori 35A saccharopine dehydrogenase YP_005769266.1 96090 D 585535 CDS YP_005769267.1 384895278 12348730 complement(97299..98675) 1 NC_017360.1 COG: COG0348; InterPro: IPR014116; cytochrome c oxidase accessory protein CcoG 98675 ccoG 12348730 ccoG Helicobacter pylori 35A cytochrome c oxidase accessory protein CcoG YP_005769267.1 97299 R 585535 CDS YP_005769268.1 384895279 12348731 98655..99443 1 NC_017360.1 COG: COG0344; Pfam: PF02660; InterPro: IPR003811; acyl-phosphate glycerol 3-phosphate acyltransferase 99443 plsY 12348731 plsY Helicobacter pylori 35A acyl-phosphate glycerol 3-phosphate acyltransferase YP_005769268.1 98655 D 585535 CDS YP_005769269.1 384895280 12348732 99440..99793 1 NC_017360.1 Pfam: PF02152; InterPro: IPR006157; dihydroneopterin aldolase 99793 folB 12348732 folB Helicobacter pylori 35A dihydroneopterin aldolase YP_005769269.1 99440 D 585535 CDS YP_005769270.1 384895281 12348733 99777..100103 1 NC_017360.1 COG: COG1629; FrpB family protein 100103 12348733 HMPREF4655_20108 Helicobacter pylori 35A FrpB family protein YP_005769270.1 99777 D 585535 CDS YP_005769271.1 384895282 12348734 100272..102863 1 NC_017360.1 COG: COG1629; Pfam: PF07715, PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 102863 frpB 12348734 frpB Helicobacter pylori 35A iron-regulated outer membrane protein YP_005769271.1 100272 D 585535 CDS YP_005769272.1 384895283 12348735 103092..104252 1 NC_017360.1 COG: COG1921; Pfam: PF03841; InterPro: IPR004534; L-seryl-tRNA(Sec) selenium transferase 104252 selA 12348735 selA Helicobacter pylori 35A L-seryl-tRNA(Sec) selenium transferase YP_005769272.1 103092 D 585535 CDS YP_005769273.1 384895284 12348736 104340..105527 1 NC_017360.1 COG: COG0195; InterPro: IPR010213; transcription termination factor NusA 105527 nusA 12348736 nusA Helicobacter pylori 35A transcription termination factor NusA YP_005769273.1 104340 D 585535 CDS YP_005769274.1 384895285 12348737 complement(105836..109654) 1 NC_017360.1 COG: COG1002; Pfam: PF07669; type II restriction-modification enzyme 109654 12348737 HMPREF4655_20112 Helicobacter pylori 35A type II restriction-modification enzyme YP_005769274.1 105836 R 585535 CDS YP_005769275.1 384895286 12348738 complement(109760..112675) 1 NC_017360.1 COG: COG3587; Pfam: PF04851; type III restriction enzyme R protein 112675 res 12348738 res Helicobacter pylori 35A type III restriction enzyme R protein YP_005769275.1 109760 R 585535 CDS YP_005769276.1 384895287 12348739 complement(112678..113283) 1 NC_017360.1 hypothetical protein 113283 12348739 HMPREF4655_20114 Helicobacter pylori 35A hypothetical protein YP_005769276.1 112678 R 585535 CDS YP_005769277.1 384895288 12348740 complement(113264..114601) 1 NC_017360.1 COG: COG2189; Pfam: PF01555; InterPro: IPR002941; type III DNA modification enzyme (methyltransferase) 114601 mod2 12348740 mod2 Helicobacter pylori 35A type III DNA modification enzyme (methyltransferase) YP_005769277.1 113264 R 585535 CDS YP_005769278.1 384895289 12348741 complement(114644..116509) 1 NC_017360.1 COG: COG1200; Pfam: PF00270, PF00271; InterPro: IPR004609; DNA helicase RecG 116509 recG 12348741 recG Helicobacter pylori 35A DNA helicase RecG YP_005769278.1 114644 R 585535 CDS YP_005769279.1 384895290 12348742 116591..116944 1 NC_017360.1 hypothetical protein 116944 12348742 HMPREF4655_20117 Helicobacter pylori 35A hypothetical protein YP_005769279.1 116591 D 585535 CDS YP_005769280.1 384895291 12348743 116948..117583 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HorD 117583 horD 12348743 horD Helicobacter pylori 35A outer membrane protein HorD YP_005769280.1 116948 D 585535 CDS YP_005769281.1 384895292 12348744 complement(117580..118332) 1 NC_017360.1 COG: COG0708; Pfam: PF03372; InterPro: IPR004808; exodeoxyribonuclease III 118332 xthA 12348744 xthA Helicobacter pylori 35A exodeoxyribonuclease III YP_005769281.1 117580 R 585535 CDS YP_005769282.1 384895293 12348746 complement(118510..119943) 1 NC_017360.1 periplasmic competence protein 119943 12348746 HMPREF4655_20120 Helicobacter pylori 35A periplasmic competence protein YP_005769282.1 118510 R 585535 CDS YP_005769283.1 384895294 12348747 complement(120165..121532) 1 NC_017360.1 COG: COG0593; Pfam: PF00308, PF08299; InterPro: IPR001957; DNA-directed DNA replication initiator protein 121532 dnaA 12348747 dnaA Helicobacter pylori 35A DNA-directed DNA replication initiator protein YP_005769283.1 120165 R 585535 CDS YP_005769284.1 384895295 12348748 121684..122220 1 NC_017360.1 purine nucleoside phosphorylase 122220 punB 12348748 punB Helicobacter pylori 35A purine nucleoside phosphorylase YP_005769284.1 121684 D 585535 CDS YP_005769285.1 384895296 12348749 122267..122506 1 NC_017360.1 hypothetical protein 122506 12348749 HMPREF4655_20123 Helicobacter pylori 35A hypothetical protein YP_005769285.1 122267 D 585535 CDS YP_005769286.1 384895297 12348750 122507..124300 1 NC_017360.1 COG: COG0449; Pfam: PF00310, PF01380; InterPro: IPR005855; glutamine--fructose-6-phosphate transaminase (isomerizing) 124300 glmS 12348750 glmS Helicobacter pylori 35A glutamine--fructose-6-phosphate transaminase (isomerizing) YP_005769286.1 122507 D 585535 CDS YP_005769287.1 384895298 12348751 124322..124948 1 NC_017360.1 COG: COG1351; Pfam: PF02511; InterPro: IPR003669; thymidylate synthase (FAD) 124948 thyX 12348751 thyX Helicobacter pylori 35A thymidylate synthase (FAD) YP_005769287.1 124322 D 585535 CDS YP_005769288.1 384895299 12348752 complement(125282..126403) 1 NC_017360.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I R-M system specificity subunit 126403 12348752 HMPREF4655_20126 Helicobacter pylori 35A type I R-M system specificity subunit YP_005769288.1 125282 R 585535 CDS YP_005769289.1 384895300 12348753 complement(126391..127167) 1 NC_017360.1 hypothetical protein 127167 12348753 HMPREF4655_20127 Helicobacter pylori 35A hypothetical protein YP_005769289.1 126391 R 585535 CDS YP_005769290.1 384895301 12348754 complement(127255..129717) 1 NC_017360.1 COG: COG0286; Pfam: PF02384; InterPro: IPR004546; type I restriction-modification system protein 129717 12348754 HMPREF4655_20128 Helicobacter pylori 35A type I restriction-modification system protein YP_005769290.1 127255 R 585535 CDS YP_005769291.1 384895302 12348755 129782..132757 1 NC_017360.1 COG: COG0610; Pfam: PF04313, PF04851; InterPro: IPR004473; type I restriction enzyme R protein 132757 hsdR 12348755 hsdR Helicobacter pylori 35A type I restriction enzyme R protein YP_005769291.1 129782 D 585535 CDS YP_005769292.1 384895303 12348756 132757..133464 1 NC_017360.1 COG: COG1451; Pfam: PF01863; InterPro: IPR002725; phosphonate metabolism protein PhnI 133464 phnI 12348756 phnI Helicobacter pylori 35A phosphonate metabolism protein PhnI YP_005769292.1 132757 D 585535 CDS YP_005769293.1 384895304 12348758 136403..136576 1 NC_017360.1 hypothetical protein 136576 12348758 HMPREF4655_20133 Helicobacter pylori 35A hypothetical protein YP_005769293.1 136403 D 585535 CDS YP_005769294.1 384895305 12348759 complement(136584..137552) 1 NC_017360.1 COG: COG0010; Pfam: PF00491; InterPro: IPR014033; arginase 137552 rocF 12348759 rocF Helicobacter pylori 35A arginase YP_005769294.1 136584 R 585535 CDS YP_005769295.1 384895306 12348760 complement(137565..138992) 1 NC_017360.1 COG: COG0833; Pfam: PF00324; InterPro: IPR004841; APC family lysine-specific permease 138992 lysP 12348760 lysP Helicobacter pylori 35A APC family lysine-specific permease YP_005769295.1 137565 R 585535 CDS YP_005769296.1 384895307 12348761 139192..140334 1 NC_017360.1 COG: COG0686; Pfam: PF05222, PF01262; InterPro: IPR007698; alanine dehydrogenase 140334 ald2 12348761 ald2 Helicobacter pylori 35A alanine dehydrogenase YP_005769296.1 139192 D 585535 CDS YP_005769297.1 384895308 12348763 complement(142221..142949) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 142949 12348763 HMPREF4655_20139 Helicobacter pylori 35A outer membrane protein YP_005769297.1 142221 R 585535 CDS YP_005769298.1 384895309 12348764 complement(142946..143113) 1 NC_017360.1 hypothetical protein 143113 12348764 HMPREF4655_20140 Helicobacter pylori 35A hypothetical protein YP_005769298.1 142946 R 585535 CDS YP_005769299.1 384895310 12348765 143135..143989 1 NC_017360.1 COG: COG0061; Pfam: PF01513; InterPro: IPR002504; NAD(+) kinase 143989 ppnK 12348765 ppnK Helicobacter pylori 35A NAD(+) kinase YP_005769299.1 143135 D 585535 CDS YP_005769300.1 384895311 12348766 144002..145576 1 NC_017360.1 COG: COG0497; Pfam: PF02463; DNA repair protein RecN 145576 recN 12348766 recN Helicobacter pylori 35A DNA repair protein RecN YP_005769300.1 144002 D 585535 CDS YP_005769301.1 384895312 12348767 145573..146880 1 NC_017360.1 COG: COG1293; Pfam: PF05670; InterPro: IPR008532; fibronectin/fibrinogen-binding protein 146880 12348767 HMPREF4655_20143 Helicobacter pylori 35A fibronectin/fibrinogen-binding protein YP_005769301.1 145573 D 585535 CDS YP_005769302.1 384895313 12348768 146899..147195 1 NC_017360.1 hypothetical protein 147195 12348768 HMPREF4655_20144 Helicobacter pylori 35A hypothetical protein YP_005769302.1 146899 D 585535 CDS YP_005769303.1 384895314 12348769 147398..147622 1 NC_017360.1 hypothetical protein 147622 12348769 HMPREF4655_20145 Helicobacter pylori 35A hypothetical protein YP_005769303.1 147398 D 585535 CDS YP_005769304.1 384895315 12348770 complement(147813..148676) 1 NC_017360.1 COG: COG0847; Pfam: PF00929; InterPro: IPR006054; DNA polymerase III subunit epsilon 148676 dnaQ 12348770 dnaQ Helicobacter pylori 35A DNA polymerase III subunit epsilon YP_005769304.1 147813 R 585535 CDS YP_005769305.1 384895316 12348771 complement(148654..149307) 1 NC_017360.1 COG: COG0036; Pfam: PF00834; InterPro: IPR013785; ribulose-phosphate 3-epimerase 149307 rpe 12348771 rpe Helicobacter pylori 35A ribulose-phosphate 3-epimerase YP_005769305.1 148654 R 585535 CDS YP_005769306.1 384895317 12348772 149378..150250 1 NC_017360.1 COG: COG0158; Pfam: PF00316; InterPro: IPR000146; fructose-bisphosphatase 150250 fbp 12348772 fbp Helicobacter pylori 35A fructose-bisphosphatase YP_005769306.1 149378 D 585535 CDS YP_005769307.1 384895318 12348773 150247..150453 1 NC_017360.1 hypothetical protein 150453 12348773 HMPREF4655_20149 Helicobacter pylori 35A hypothetical protein YP_005769307.1 150247 D 585535 CDS YP_005769308.1 384895319 12348774 150465..151361 1 NC_017360.1 type II methylase protein 151361 12348774 HMPREF4655_20150 Helicobacter pylori 35A type II methylase protein YP_005769308.1 150465 D 585535 CDS YP_005769309.1 384895320 12348775 151354..152085 1 NC_017360.1 hypothetical protein 152085 12348775 HMPREF4655_20151 Helicobacter pylori 35A hypothetical protein YP_005769309.1 151354 D 585535 CDS YP_005769310.1 384895321 12348776 complement(152273..153160) 1 NC_017360.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; site-specific DNA-methyltransferase 153160 dcm 12348776 dcm Helicobacter pylori 35A site-specific DNA-methyltransferase YP_005769310.1 152273 R 585535 CDS YP_005769311.1 384895322 12348777 complement(153322..153528) 1 NC_017360.1 Pfam: PF00145; site-specific DNA-methyltransferase 153528 dcm2 12348777 dcm2 Helicobacter pylori 35A site-specific DNA-methyltransferase YP_005769311.1 153322 R 585535 CDS YP_005769312.1 384895323 12348778 complement(153518..153679) 1 NC_017360.1 hypothetical protein 153679 12348778 HMPREF4655_20154 Helicobacter pylori 35A hypothetical protein YP_005769312.1 153518 R 585535 CDS YP_005769313.1 384895324 12348779 complement(153660..154613) 1 NC_017360.1 hypothetical protein 154613 12348779 HMPREF4655_20155 Helicobacter pylori 35A hypothetical protein YP_005769313.1 153660 R 585535 CDS YP_005769314.1 384895325 12348780 complement(154672..155739) 1 NC_017360.1 COG: COG0264; Pfam: PF00627, PF00889; InterPro: IPR001816; elongation factor EF1B 155739 tsf 12348780 tsf Helicobacter pylori 35A elongation factor EF1B YP_005769314.1 154672 R 585535 CDS YP_005769315.1 384895326 12348781 complement(155739..156617) 1 NC_017360.1 COG: COG0052; Pfam: PF00318; InterPro: IPR005706; 30S ribosomal protein S2 156617 rpsB 12348781 rpsB Helicobacter pylori 35A 30S ribosomal protein S2 YP_005769315.1 155739 R 585535 CDS YP_005769316.1 384895327 12348782 156784..159633 1 NC_017360.1 COG: COG1074; Pfam: PF00580; InterPro: IPR000212; helicase 159633 12348782 HMPREF4655_20158 Helicobacter pylori 35A helicase YP_005769316.1 156784 D 585535 CDS YP_005769317.1 384895328 12348783 159624..160973 1 NC_017360.1 COG: COG3004; Pfam: PF06965; InterPro: IPR004670; NhaA family sodium:proton (Na+:H+) antiporter 160973 nhaA 12348783 nhaA Helicobacter pylori 35A NhaA family sodium:proton (Na+:H+) antiporter YP_005769317.1 159624 D 585535 CDS YP_005769318.1 384895329 12348784 161020..161313 1 NC_017360.1 COG: COG1862; Pfam: PF02699; InterPro: IPR003849; preprotein translocase 161313 yajC 12348784 yajC Helicobacter pylori 35A preprotein translocase YP_005769318.1 161020 D 585535 CDS YP_005769319.1 384895330 12348785 161313..162890 1 NC_017360.1 COG: COG0342; Pfam: PF07549, PF02355; InterPro: IPR005791; protein-export membrane protein SecD 162890 secD 12348785 secD Helicobacter pylori 35A protein-export membrane protein SecD YP_005769319.1 161313 D 585535 CDS YP_005769320.1 384895331 12348786 162900..163871 1 NC_017360.1 COG: COG0341; Pfam: PF07549, PF02355; InterPro: IPR005665; protein-export membrane protein SecF 163871 secF 12348786 secF Helicobacter pylori 35A protein-export membrane protein SecF YP_005769320.1 162900 D 585535 CDS YP_005769321.1 384895332 12348787 163881..164219 1 NC_017360.1 hypothetical protein 164219 12348787 HMPREF4655_20163 Helicobacter pylori 35A hypothetical protein YP_005769321.1 163881 D 585535 CDS YP_005769322.1 384895333 12348788 164229..166649 1 NC_017360.1 COG: COG0495; Pfam: PF00133; InterPro: IPR002302; leucyl-tRNA synthetase 166649 leuS 12348788 leuS Helicobacter pylori 35A leucyl-tRNA synthetase YP_005769322.1 164229 D 585535 CDS YP_005769323.1 384895334 12348789 166646..167158 1 NC_017360.1 hypothetical protein 167158 12348789 HMPREF4655_20165 Helicobacter pylori 35A hypothetical protein YP_005769323.1 166646 D 585535 CDS YP_005769324.1 384895335 12348790 167148..168317 1 NC_017360.1 COG: COG0285; InterPro: IPR001645; tetrahydrofolate synthase 168317 folC 12348790 folC Helicobacter pylori 35A tetrahydrofolate synthase YP_005769324.1 167148 D 585535 CDS YP_005769325.1 384895336 12348791 168317..169243 1 NC_017360.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; ToxR-activated protein 169243 tagE 12348791 tagE Helicobacter pylori 35A ToxR-activated protein YP_005769325.1 168317 D 585535 CDS YP_005769326.1 384895337 12348792 169279..169968 1 NC_017360.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; ToxR-activated protein 169968 tagE2 12348792 tagE2 Helicobacter pylori 35A ToxR-activated protein YP_005769326.1 169279 D 585535 CDS YP_005769327.1 384895338 12348793 170107..170517 1 NC_017360.1 COG: COG1664; Pfam: PF04519; InterPro: IPR007607; hypothetical protein 170517 12348793 HMPREF4655_20169 Helicobacter pylori 35A hypothetical protein YP_005769327.1 170107 D 585535 CDS YP_005769328.1 384895339 12348794 170521..173520 1 NC_017360.1 COG: COG1197; Pfam: PF02559, PF00270, PF00271, PF03461; InterPro: IPR004576; transcription-repair coupling factor 173520 trcF 12348794 trcF Helicobacter pylori 35A transcription-repair coupling factor YP_005769328.1 170521 D 585535 CDS YP_005769329.1 384895340 12348795 173647..174150 1 NC_017360.1 COG: COG0723; Pfam: PF00355; InterPro: IPR006317; Ubiquinol--cytochrome-c reductase 174150 petA 12348795 petA Helicobacter pylori 35A Ubiquinol--cytochrome-c reductase YP_005769329.1 173647 D 585535 CDS YP_005769330.1 384895341 12348796 174161..175399 1 NC_017360.1 COG: COG1290; Pfam: PF00033, PF00032; InterPro: IPR016175; ubiquinol--cytochrome c reductase subunit B 175399 petB 12348796 petB Helicobacter pylori 35A ubiquinol--cytochrome c reductase subunit B YP_005769330.1 174161 D 585535 CDS YP_005769331.1 384895342 12348797 175396..176253 1 NC_017360.1 COG: COG2857; Pfam: PF00034, PF02167; ubiquinol-cytochrome c reductase cytochrome c1 subunit 176253 fbcC 12348797 fbcC Helicobacter pylori 35A ubiquinol-cytochrome c reductase cytochrome c1 subunit YP_005769331.1 175396 D 585535 CDS YP_005769332.1 384895343 12348798 complement(176460..176708) 1 NC_017360.1 hypothetical protein 176708 12348798 HMPREF4655_20174 Helicobacter pylori 35A hypothetical protein YP_005769332.1 176460 R 585535 CDS YP_005769333.1 384895344 12348799 complement(176705..177130) 1 NC_017360.1 hypothetical protein 177130 12348799 HMPREF4655_20175 Helicobacter pylori 35A hypothetical protein YP_005769333.1 176705 R 585535 CDS YP_005769334.1 384895345 12348800 complement(177090..178238) 1 NC_017360.1 COG: COG1106; hypothetical protein 178238 12348800 HMPREF4655_20176 Helicobacter pylori 35A hypothetical protein YP_005769334.1 177090 R 585535 CDS YP_005769335.1 384895346 12348801 complement(178429..180273) 1 NC_017360.1 COG: COG0768; Pfam: PF03717, PF00905; InterPro: IPR001460; cell division protein FtsI 180273 ftsI 12348801 ftsI Helicobacter pylori 35A cell division protein FtsI YP_005769335.1 178429 R 585535 CDS YP_005769336.1 384895347 12348802 complement(180280..180405) 1 NC_017360.1 transcriptional regulator AsnC family protein 180405 12348802 HMPREF4655_20178 Helicobacter pylori 35A transcriptional regulator AsnC family protein YP_005769336.1 180280 R 585535 CDS YP_005769337.1 384895348 12348803 complement(180429..180758) 1 NC_017360.1 COG: COG1677; Pfam: PF02049; InterPro: IPR001624; flagellar hook-basal body complex protein FliE 180758 fliE 12348803 fliE Helicobacter pylori 35A flagellar hook-basal body complex protein FliE YP_005769337.1 180429 R 585535 CDS YP_005769338.1 384895349 12348804 complement(180886..181371) 1 NC_017360.1 COG: COG1558; Pfam: PF00460, PF06429; InterPro: IPR006299; flagellar basal-body rod protein FlgC 181371 flgC 12348804 flgC Helicobacter pylori 35A flagellar basal-body rod protein FlgC YP_005769338.1 180886 R 585535 CDS YP_005769339.1 384895350 12348805 complement(181384..181806) 1 NC_017360.1 COG: COG1815; Pfam: PF00460; InterPro: IPR006300; flagellar basal-body rod protein FlgB 181806 flgB 12348805 flgB Helicobacter pylori 35A flagellar basal-body rod protein FlgB YP_005769339.1 181384 R 585535 CDS YP_005769340.1 384895351 12348806 182013..183179 1 NC_017360.1 COG: COG0772; Pfam: PF01098; InterPro: IPR001182; FtsW/RodA/SpoVE family cell division protein 183179 ftsW 12348806 ftsW Helicobacter pylori 35A FtsW/RodA/SpoVE family cell division protein YP_005769340.1 182013 D 585535 CDS YP_005769341.1 384895352 12348807 complement(183203..184204) 1 NC_017360.1 COG: COG0614; Pfam: PF01497; iron(III) ABC superfamily ATP binding cassette transporter 184204 ceuE 12348807 ceuE Helicobacter pylori 35A iron(III) ABC superfamily ATP binding cassette transporter YP_005769341.1 183203 R 585535 CDS YP_005769342.1 384895353 12348808 184403..185038 1 NC_017360.1 COG: COG0450; Pfam: PF00578; InterPro: IPR012335; peroxiredoxin 185038 tsaA 12348808 tsaA Helicobacter pylori 35A peroxiredoxin YP_005769342.1 184403 D 585535 CDS YP_005769343.1 384895354 12348809 185184..185999 1 NC_017360.1 COG: COG1464; Pfam: PF03180; InterPro: IPR004872; ABC superfamily ATP binding cassette transporter, binding protein 185999 metQ 12348809 metQ Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, binding protein YP_005769343.1 185184 D 585535 CDS YP_005769344.1 384895355 12348810 complement(186068..187843) 1 NC_017360.1 COG: COG0768; Pfam: PF03717, PF00905; InterPro: IPR001460; penicillin-binding protein 2 187843 mrdA 12348810 mrdA Helicobacter pylori 35A penicillin-binding protein 2 YP_005769344.1 186068 R 585535 CDS YP_005769345.1 384895356 12348811 complement(187824..188267) 1 NC_017360.1 hypothetical protein 188267 12348811 HMPREF4655_20187 Helicobacter pylori 35A hypothetical protein YP_005769345.1 187824 R 585535 CDS YP_005769346.1 384895357 12348812 complement(188280..188906) 1 NC_017360.1 COG: COG0218; Pfam: PF01926; InterPro: IPR002917; ribosome biogenesis GTP-binding protein YsxC 188906 ysxC 12348812 ysxC Helicobacter pylori 35A ribosome biogenesis GTP-binding protein YsxC YP_005769346.1 188280 R 585535 CDS YP_005769347.1 384895358 12348813 complement(188903..189460) 1 NC_017360.1 COG: COG1934; Pfam: PF03968; InterPro: IPR005653; lipopolysaccharide ABC superfamily ATP binding cassette transporter, permease protein 189460 lptA 12348813 lptA Helicobacter pylori 35A lipopolysaccharide ABC superfamily ATP binding cassette transporter, permease protein YP_005769347.1 188903 R 585535 CDS YP_005769348.1 384895359 12348814 complement(189460..190053) 1 NC_017360.1 hypothetical protein 190053 12348814 HMPREF4655_20190 Helicobacter pylori 35A hypothetical protein YP_005769348.1 189460 R 585535 CDS YP_005769349.1 384895360 12348815 complement(190028..190522) 1 NC_017360.1 COG: COG1778; Pfam: PF08282; InterPro: IPR010023; 3-deoxy-manno-octulosonate-8-phosphatase 190522 kdsC 12348815 kdsC Helicobacter pylori 35A 3-deoxy-manno-octulosonate-8-phosphatase YP_005769349.1 190028 R 585535 CDS YP_005769350.1 384895361 12348816 complement(190519..191466) 1 NC_017360.1 COG: COG0797; Pfam: PF03330, PF05036; InterPro: IPR012997; lipoprotein A 191466 rlpA 12348816 rlpA Helicobacter pylori 35A lipoprotein A YP_005769350.1 190519 R 585535 CDS YP_005769351.1 384895362 12348817 complement(191466..192584) 1 NC_017360.1 COG: COG0741; Pfam: PF01464, PF01476; InterPro: IPR008258; regulatory protein DniR 192584 dniR 12348817 dniR Helicobacter pylori 35A regulatory protein DniR YP_005769351.1 191466 R 585535 CDS YP_005769352.1 384895363 12348818 complement(192673..193437) 1 NC_017360.1 COG: COG0084; Pfam: PF01026; InterPro: IPR015991; TatD family hydrolase 193437 12348818 HMPREF4655_20194 Helicobacter pylori 35A TatD family hydrolase YP_005769352.1 192673 R 585535 CDS YP_005769353.1 384895364 12348819 193512..194132 1 NC_017360.1 COG: COG0307; Pfam: PF00677; InterPro: IPR001783; riboflavin synthase subunit alpha 194132 ribE 12348819 ribE Helicobacter pylori 35A riboflavin synthase subunit alpha YP_005769353.1 193512 D 585535 CDS YP_005769354.1 384895365 12348820 194133..194405 1 NC_017360.1 COG: COG2257; Pfam: PF01312; InterPro: IPR004683; FlhB domain-containing protein 194405 12348820 HMPREF4655_20196 Helicobacter pylori 35A FlhB domain-containing protein YP_005769354.1 194133 D 585535 CDS YP_005769355.1 384895366 12348821 194427..195410 1 NC_017360.1 COG: COG1135; Pfam: PF00005, PF08352; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 195410 12348821 HMPREF4655_20197 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769355.1 194427 D 585535 CDS YP_005769356.1 384895367 12348822 195412..196059 1 NC_017360.1 COG: COG2011; Pfam: PF00528; ABC superfamily ATP binding cassette transporter, membrane protein 196059 12348822 HMPREF4655_20198 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, membrane protein YP_005769356.1 195412 D 585535 CDS YP_005769357.1 384895368 12348823 complement(196246..196677) 1 NC_017360.1 hypothetical protein 196677 12348823 HMPREF4655_20199 Helicobacter pylori 35A hypothetical protein YP_005769357.1 196246 R 585535 CDS YP_005769358.1 384895369 12348824 complement(196687..197283) 1 NC_017360.1 Pfam: PF01569; InterPro: IPR000326; hypothetical protein 197283 12348824 HMPREF4655_20200 Helicobacter pylori 35A hypothetical protein YP_005769358.1 196687 R 585535 CDS YP_005769359.1 384895370 12348825 complement(197283..198236) 1 NC_017360.1 COG: COG0472; Pfam: PF00953; InterPro: IPR000715; undecaprenyl phosphate N-acetylglucosaminyltransferase 198236 llm 12348825 llm Helicobacter pylori 35A undecaprenyl phosphate N-acetylglucosaminyltransferase YP_005769359.1 197283 R 585535 CDS YP_005769360.1 384895371 12348826 198426..199214 1 NC_017360.1 COG: COG0854; Pfam: PF03740; InterPro: IPR013785; pyridoxine 5'-phosphate synthase 199214 pdxJ 12348826 pdxJ Helicobacter pylori 35A pyridoxine 5'-phosphate synthase YP_005769360.1 198426 D 585535 CDS YP_005769361.1 384895372 12348827 199216..200139 1 NC_017360.1 COG: COG1995; Pfam: PF04166; InterPro: IPR005255; 4-hydroxythreonine-4-phosphate dehydrogenase 200139 pdxA 12348827 pdxA Helicobacter pylori 35A 4-hydroxythreonine-4-phosphate dehydrogenase YP_005769361.1 199216 D 585535 CDS YP_005769362.1 384895373 12348828 200202..201227 1 NC_017360.1 COG: COG0533; Pfam: PF00814; InterPro: IPR000905; O-sialoglycoprotein endopeptidase 201227 gcp 12348828 gcp Helicobacter pylori 35A O-sialoglycoprotein endopeptidase YP_005769362.1 200202 D 585535 CDS YP_005769363.1 384895374 12348829 202098..202886 1 NC_017360.1 COG: COG4786; Pfam: PF00460, PF06429; InterPro: IPR012834; flagellar basal-body rod protein FlgG 202886 flgG 12348829 flgG Helicobacter pylori 35A flagellar basal-body rod protein FlgG YP_005769363.1 202098 D 585535 CDS YP_005769364.1 384895375 12348830 complement(203574..204335) 1 NC_017360.1 COG: COG4735; Pfam: PF03667; InterPro: IPR005367; hypothetical protein 204335 12348830 HMPREF4655_20206 Helicobacter pylori 35A hypothetical protein YP_005769364.1 203574 R 585535 CDS YP_005769365.1 384895376 12348831 complement(204604..205020) 1 NC_017360.1 COG: COG0781; Pfam: PF01029; InterPro: IPR006027; transcription antitermination factor NusB 205020 nusB 12348831 nusB Helicobacter pylori 35A transcription antitermination factor NusB YP_005769365.1 204604 R 585535 CDS YP_005769366.1 384895377 12348832 complement(205022..205492) 1 NC_017360.1 COG: COG0054; Pfam: PF00885; InterPro: IPR002180; 6,7-dimethyl-8-ribityllumazine synthase 205492 ribH 12348832 ribH Helicobacter pylori 35A 6,7-dimethyl-8-ribityllumazine synthase YP_005769366.1 205022 R 585535 CDS YP_005769367.1 384895378 12348833 complement(205502..206332) 1 NC_017360.1 COG: COG2877; Pfam: PF00793; InterPro: IPR006218; 3-deoxy-7-phosphoheptulonate synthase 206332 kdsA 12348833 kdsA Helicobacter pylori 35A 3-deoxy-7-phosphoheptulonate synthase YP_005769367.1 205502 R 585535 CDS YP_005769368.1 384895379 12348834 complement(206319..206984) 1 NC_017360.1 COG: COG0288; Pfam: PF00484; InterPro: IPR001765; carbonate dehydratase 206984 cynT 12348834 cynT Helicobacter pylori 35A carbonate dehydratase YP_005769368.1 206319 R 585535 CDS YP_005769369.1 384895380 12348835 207106..207789 1 NC_017360.1 COG: COG0284; Pfam: PF00215; InterPro: IPR013785; orotidine-5'-phosphate decarboxylase 207789 pyrF 12348835 pyrF Helicobacter pylori 35A orotidine-5'-phosphate decarboxylase YP_005769369.1 207106 D 585535 CDS YP_005769370.1 384895381 12348836 207790..208620 1 NC_017360.1 COG: COG0414; Pfam: PF02569; InterPro: IPR003721; pantoate--beta-alanine ligase 208620 panC 12348836 panC Helicobacter pylori 35A pantoate--beta-alanine ligase YP_005769370.1 207790 D 585535 CDS YP_005769371.1 384895382 12348842 complement(209810..212083) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopZ 212083 hopZ 12348842 hopZ Helicobacter pylori 35A outer membrane protein HopZ YP_005769371.1 209810 R 585535 CDS YP_005769372.1 384895383 12348843 complement(212261..213901) 1 NC_017360.1 COG: COG0459; Pfam: PF00118; InterPro: IPR002423; chaperonin GroEL 213901 groEL 12348843 groEL Helicobacter pylori 35A chaperonin GroEL YP_005769372.1 212261 R 585535 CDS YP_005769373.1 384895384 12348844 complement(213926..214282) 1 NC_017360.1 COG: COG0234; Pfam: PF00166; InterPro: IPR001476; chaperone GroES 214282 groES 12348844 groES Helicobacter pylori 35A chaperone GroES YP_005769373.1 213926 R 585535 CDS YP_005769374.1 384895385 12348845 214557..216236 1 NC_017360.1 COG: COG0358; Pfam: PF01807, PF08275, PF01751; InterPro: IPR006295; DNA primase 216236 dnaG 12348845 dnaG Helicobacter pylori 35A DNA primase YP_005769374.1 214557 D 585535 CDS YP_005769375.1 384895386 12348846 216233..217285 1 NC_017360.1 COG: COG0482; Pfam: PF06508; tRNA methyltransferase 217285 trmU 12348846 trmU Helicobacter pylori 35A tRNA methyltransferase YP_005769375.1 216233 D 585535 CDS YP_005769376.1 384895387 12348847 217376..218203 1 NC_017360.1 hypothetical protein 218203 12348847 HMPREF4655_20218 Helicobacter pylori 35A hypothetical protein YP_005769376.1 217376 D 585535 CDS YP_005769377.1 384895388 12348848 218348..218629 1 NC_017360.1 hypothetical protein 218629 12348848 HMPREF4655_20219 Helicobacter pylori 35A hypothetical protein YP_005769377.1 218348 D 585535 CDS YP_005769378.1 384895389 12348849 218629..218892 1 NC_017360.1 hypothetical protein 218892 12348849 HMPREF4655_20220 Helicobacter pylori 35A hypothetical protein YP_005769378.1 218629 D 585535 CDS YP_005769379.1 384895390 12348850 218894..221257 1 NC_017360.1 COG: COG3451; Pfam: PF03135; InterPro: IPR004346; DNA transfer protein 221257 virB4 12348850 virB4 Helicobacter pylori 35A DNA transfer protein YP_005769379.1 218894 D 585535 CDS YP_005769380.1 384895391 12348852 221488..222918 1 NC_017360.1 COG: COG3014; hypothetical protein 222918 12348852 HMPREF4655_20222 Helicobacter pylori 35A hypothetical protein YP_005769380.1 221488 D 585535 CDS YP_005769381.1 384895392 12348853 223019..223984 1 NC_017360.1 COG: COG0835; Pfam: PF01584, PF00072; InterPro: IPR002545; chemotaxis protein 223984 cheV 12348853 cheV Helicobacter pylori 35A chemotaxis protein YP_005769381.1 223019 D 585535 CDS YP_005769382.1 384895393 12348854 223981..225198 1 NC_017360.1 COG: COG0019; Pfam: PF00278; InterPro: IPR005730; carboxynorspermidine decarboxylase 225198 nspC 12348854 nspC Helicobacter pylori 35A carboxynorspermidine decarboxylase YP_005769382.1 223981 D 585535 CDS YP_005769383.1 384895394 12348855 complement(225208..225780) 1 NC_017360.1 Pfam: PF01569; InterPro: IPR000326; lipid A 1-phosphatase 225780 12348855 HMPREF4655_20225 Helicobacter pylori 35A lipid A 1-phosphatase YP_005769383.1 225208 R 585535 CDS YP_005769384.1 384895395 12348856 complement(225791..227356) 1 NC_017360.1 COG: COG2194; Pfam: PF08019, PF00884; InterPro: IPR000917; integral membrane protein 227356 12348856 HMPREF4655_20226 Helicobacter pylori 35A integral membrane protein YP_005769384.1 225791 R 585535 CDS YP_005769385.1 384895396 12348857 complement(227441..227569) 1 NC_017360.1 hypothetical protein 227569 12348857 HMPREF4655_20227 Helicobacter pylori 35A hypothetical protein YP_005769385.1 227441 R 585535 CDS YP_005769386.1 384895397 12348858 complement(227739..229805) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopD 229805 hopD 12348858 hopD Helicobacter pylori 35A outer membrane protein HopD YP_005769386.1 227739 R 585535 CDS YP_005769387.1 384895398 12348859 complement(229802..229990) 1 NC_017360.1 hypothetical protein 229990 12348859 HMPREF4655_20229 Helicobacter pylori 35A hypothetical protein YP_005769387.1 229802 R 585535 CDS YP_005769388.1 384895399 12348860 230051..230443 1 NC_017360.1 COG: COG1864; Pfam: PF01223; InterPro: IPR001604; hypothetical protein 230443 12348860 HMPREF4655_20230 Helicobacter pylori 35A hypothetical protein YP_005769388.1 230051 D 585535 CDS YP_005769389.1 384895400 12348861 complement(230725..231552) 1 NC_017360.1 COG: COG0287; Pfam: PF02153; InterPro: IPR003099; prephenate dehydrogenase 231552 tyrA 12348861 tyrA Helicobacter pylori 35A prephenate dehydrogenase YP_005769389.1 230725 R 585535 CDS YP_005769390.1 384895401 12348862 complement(231577..234054) 1 NC_017360.1 COG: COG0466; Pfam: PF02190, PF00004, PF05362; InterPro: IPR004815; endopeptidase La 234054 lon 12348862 lon Helicobacter pylori 35A endopeptidase La YP_005769390.1 231577 R 585535 CDS YP_005769391.1 384895402 12348863 complement(234095..234757) 1 NC_017360.1 COG: COG4105; competence lipoprotein 234757 comL 12348863 comL Helicobacter pylori 35A competence lipoprotein YP_005769391.1 234095 R 585535 CDS YP_005769392.1 384895403 12348864 complement(234800..234946) 1 NC_017360.1 hypothetical protein 234946 12348864 HMPREF4655_20234 Helicobacter pylori 35A hypothetical protein YP_005769392.1 234800 R 585535 CDS YP_005769393.1 384895404 12348865 235080..235547 1 NC_017360.1 COG: COG1699; Pfam: PF02623; InterPro: IPR003775; flagellar assembly factor FliW 235547 fliW 12348865 fliW Helicobacter pylori 35A flagellar assembly factor FliW YP_005769393.1 235080 D 585535 CDS YP_005769394.1 384895405 12348866 complement(235508..235711) 1 NC_017360.1 flavoprotein oxidoreductase 235711 12348866 HMPREF4655_20236 Helicobacter pylori 35A flavoprotein oxidoreductase YP_005769394.1 235508 R 585535 CDS YP_005769395.1 384895406 12348867 235732..236211 1 NC_017360.1 COG: COG0764; Pfam: PF07977; InterPro: IPR010084; (3R)-hydroxymyristoyl-ACP dehydratase 236211 fabZ 12348867 fabZ Helicobacter pylori 35A (3R)-hydroxymyristoyl-ACP dehydratase YP_005769395.1 235732 D 585535 CDS YP_005769396.1 384895407 12348868 236215..237027 1 NC_017360.1 COG: COG1043; Pfam: PF00132; InterPro: IPR010137; acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase 237027 lpxA 12348868 lpxA Helicobacter pylori 35A acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase YP_005769396.1 236215 D 585535 CDS YP_005769397.1 384895408 12348869 237029..238375 1 NC_017360.1 COG: COG1219; Pfam: PF07724; InterPro: IPR004487; ATP-dependent Clp protease ATP-binding subunit 238375 clpX 12348869 clpX Helicobacter pylori 35A ATP-dependent Clp protease ATP-binding subunit YP_005769397.1 237029 D 585535 CDS YP_005769398.1 384895409 12348870 238417..239460 1 NC_017360.1 COG: COG1077; Pfam: PF06723; InterPro: IPR004753; rod shape-determining protein MreB 239460 mreB 12348870 mreB Helicobacter pylori 35A rod shape-determining protein MreB YP_005769398.1 238417 D 585535 CDS YP_005769399.1 384895410 12348871 239464..240210 1 NC_017360.1 COG: COG1792; Pfam: PF04085; InterPro: IPR007221; rod shape-determining protein MreC 240210 mreC 12348871 mreC Helicobacter pylori 35A rod shape-determining protein MreC YP_005769399.1 239464 D 585535 CDS YP_005769400.1 384895411 12348872 complement(240267..243170) 1 NC_017360.1 Pfam: PF04851; type III restriction enzyme R protein 243170 12348872 HMPREF4655_20242 Helicobacter pylori 35A type III restriction enzyme R protein YP_005769400.1 240267 R 585535 CDS YP_005769401.1 384895412 12348874 245681..246544 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (cytosine-N(4)-specific) 246544 mjaIM 12348874 mjaIM Helicobacter pylori 35A site-specific DNA-methyltransferase (cytosine-N(4)-specific) YP_005769401.1 245681 D 585535 CDS YP_005769402.1 384895413 12348875 246531..247313 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (adenine-specific) 247313 mboIIM 12348875 mboIIM Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005769402.1 246531 D 585535 CDS YP_005769403.1 384895414 12348876 247329..248603 1 NC_017360.1 typeIIS restriction enzyme 248603 mboIIR 12348876 mboIIR Helicobacter pylori 35A typeIIS restriction enzyme YP_005769403.1 247329 D 585535 CDS YP_005769404.1 384895415 12348877 248691..249332 1 NC_017360.1 COG: COG0745; Pfam: PF00072, PF00486; InterPro: IPR001789; response regulator 249332 12348877 HMPREF4655_20249 Helicobacter pylori 35A response regulator YP_005769404.1 248691 D 585535 CDS YP_005769405.1 384895416 12348878 249367..250500 1 NC_017360.1 COG: COG0642; Pfam: PF00512, PF02518; InterPro: IPR003594; sensor histidine kinase 250500 12348878 HMPREF4655_20250 Helicobacter pylori 35A sensor histidine kinase YP_005769405.1 249367 D 585535 CDS YP_005769406.1 384895417 12348879 250503..251897 1 NC_017360.1 COG: COG0063; Pfam: PF03853, PF01256; InterPro: IPR000631; sugar kinase 251897 12348879 HMPREF4655_20251 Helicobacter pylori 35A sugar kinase YP_005769406.1 250503 D 585535 CDS YP_005769407.1 384895418 12348880 251908..253374 1 NC_017360.1 COG: COG0305; Pfam: PF00772, PF03796; InterPro: IPR007692; replicative DNA helicase DnaB 253374 dnaB 12348880 dnaB Helicobacter pylori 35A replicative DNA helicase DnaB YP_005769407.1 251908 D 585535 CDS YP_005769408.1 384895419 12348881 253371..254684 1 NC_017360.1 COG: COG0658; Pfam: PF03772; InterPro: IPR004477; competence locus E 254684 comE 12348881 comE Helicobacter pylori 35A competence locus E YP_005769408.1 253371 D 585535 CDS YP_005769409.1 384895420 12348882 254713..255597 1 NC_017360.1 COG: COG0382; Pfam: PF01040; InterPro: IPR006371; prenyltransferase 255597 ubiA 12348882 ubiA Helicobacter pylori 35A prenyltransferase YP_005769409.1 254713 D 585535 CDS YP_005769410.1 384895421 12348883 255590..256084 1 NC_017360.1 hypothetical protein 256084 12348883 HMPREF4655_20255 Helicobacter pylori 35A hypothetical protein YP_005769410.1 255590 D 585535 CDS YP_005769411.1 384895422 12348884 256097..256600 1 NC_017360.1 hypothetical protein 256600 12348884 HMPREF4655_20256 Helicobacter pylori 35A hypothetical protein YP_005769411.1 256097 D 585535 CDS YP_005769412.1 384895423 12348885 256597..257403 1 NC_017360.1 COG: COG0688; Pfam: PF02666; InterPro: IPR005221; phosphatidylserine decarboxylase 257403 psd 12348885 psd Helicobacter pylori 35A phosphatidylserine decarboxylase YP_005769412.1 256597 D 585535 CDS YP_005769413.1 384895424 12348886 257390..258400 1 NC_017360.1 COG: COG0379; Pfam: PF02445; InterPro: IPR003473; quinolinate synthetase 258400 nadA 12348886 nadA Helicobacter pylori 35A quinolinate synthetase YP_005769413.1 257390 D 585535 CDS YP_005769414.1 384895425 12348887 258400..259221 1 NC_017360.1 COG: COG0157; Pfam: PF02749, PF01729; InterPro: IPR004393; nicotinate-nucleotide diphosphorylase 259221 nadC 12348887 nadC Helicobacter pylori 35A nicotinate-nucleotide diphosphorylase YP_005769414.1 258400 D 585535 CDS YP_005769415.1 384895426 12348888 259245..261773 1 NC_017360.1 adenine specific DNA methyltransferase 261773 12348888 HMPREF4655_20260 Helicobacter pylori 35A adenine specific DNA methyltransferase YP_005769415.1 259245 D 585535 CDS YP_005769416.1 384895427 12348890 262954..264033 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (adenine-specific) 264033 hinfIM 12348890 hinfIM Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005769416.1 262954 D 585535 CDS YP_005769417.1 384895428 12348891 264033..264926 1 NC_017360.1 type II restriction endonuclease 264926 12348891 HMPREF4655_20264 Helicobacter pylori 35A type II restriction endonuclease YP_005769417.1 264033 D 585535 CDS YP_005769418.1 384895429 12348892 265027..265179 1 NC_017360.1 adenine specific DNA methyltransferase 265179 12348892 HMPREF4655_20265 Helicobacter pylori 35A adenine specific DNA methyltransferase YP_005769418.1 265027 D 585535 CDS YP_005769419.1 384895430 12348893 265282..266646 1 NC_017360.1 COG: COG0793; Pfam: PF00595, PF03572; InterPro: IPR004447; carboxy-terminal processing protease CtpA 266646 ctpA 12348893 ctpA Helicobacter pylori 35A carboxy-terminal processing protease CtpA YP_005769419.1 265282 D 585535 CDS YP_005769420.1 384895431 12348894 266653..267828 1 NC_017360.1 hypothetical protein 267828 12348894 HMPREF4655_20267 Helicobacter pylori 35A hypothetical protein YP_005769420.1 266653 D 585535 CDS YP_005769421.1 384895432 12348895 267815..268531 1 NC_017360.1 COG: COG0204; Pfam: PF01553; InterPro: IPR002123; 1-acylglycerol-3-phosphate O-acyltransferase 268531 plsC 12348895 plsC Helicobacter pylori 35A 1-acylglycerol-3-phosphate O-acyltransferase YP_005769421.1 267815 D 585535 CDS YP_005769422.1 384895433 12348896 268528..269229 1 NC_017360.1 COG: COG0692; Pfam: PF03167; InterPro: IPR005122; uracil-DNA glycosylase 269229 ung 12348896 ung Helicobacter pylori 35A uracil-DNA glycosylase YP_005769422.1 268528 D 585535 CDS YP_005769423.1 384895434 12348897 269318..270310 1 NC_017360.1 COG: COG0057; Pfam: PF00044, PF02800; InterPro: IPR000173; glyceraldehyde-3-phosphate dehydrogenase (NAD(P)(+)) (phosphorylating) 270310 gapB 12348897 gapB Helicobacter pylori 35A glyceraldehyde-3-phosphate dehydrogenase (NAD(P)(+)) (phosphorylating) YP_005769423.1 269318 D 585535 CDS YP_005769424.1 384895435 12348898 270326..271534 1 NC_017360.1 COG: COG0126; Pfam: PF00162; InterPro: IPR001576; phosphoglycerate kinase 271534 pgk 12348898 pgk Helicobacter pylori 35A phosphoglycerate kinase YP_005769424.1 270326 D 585535 CDS YP_005769425.1 384895436 12348899 271550..272512 1 NC_017360.1 COG: COG0598; Pfam: PF01544; InterPro: IPR004488; MIT family metal ion transporter CorA 272512 corA 12348899 corA Helicobacter pylori 35A MIT family metal ion transporter CorA YP_005769425.1 271550 D 585535 CDS YP_005769426.1 384895437 12348900 272519..273247 1 NC_017360.1 COG: COG0861; Pfam: PF03741; InterPro: IPR005496; TerC family integral membrane protein 273247 12348900 HMPREF4655_20273 Helicobacter pylori 35A TerC family integral membrane protein YP_005769426.1 272519 D 585535 CDS YP_005769427.1 384895438 12348901 complement(273561..274259) 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (adenine-specific) 274259 mboIBM 12348901 mboIBM Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005769427.1 273561 R 585535 CDS YP_005769428.1 384895439 12348902 complement(274256..275101) 1 NC_017360.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase 275101 ddeIM 12348902 ddeIM Helicobacter pylori 35A DNA (cytosine-5-)-methyltransferase YP_005769428.1 274256 R 585535 CDS YP_005769429.1 384895440 12348903 complement(275176..276675) 1 NC_017360.1 COG: COG0591; Pfam: PF00474; InterPro: IPR011851; SSS family proline:sodium (Na+) symporter 276675 putP 12348903 putP Helicobacter pylori 35A SSS family proline:sodium (Na+) symporter YP_005769429.1 275176 R 585535 CDS YP_005769430.1 384895441 12348904 complement(276702..280259) 1 NC_017360.1 COG: COG1012; Pfam: PF01619, PF00171; InterPro: IPR015590; proline/pyrroline-5-carboxylate dehydrogenase 280259 12348904 HMPREF4655_20277 Helicobacter pylori 35A proline/pyrroline-5-carboxylate dehydrogenase YP_005769430.1 276702 R 585535 CDS YP_005769431.1 384895442 12348905 280577..280786 1 NC_017360.1 hypothetical protein 280786 12348905 HMPREF4655_20278 Helicobacter pylori 35A hypothetical protein YP_005769431.1 280577 D 585535 CDS YP_005769432.1 384895443 12348906 281346..281537 1 NC_017360.1 hypothetical protein 281537 12348906 HMPREF4655_20279 Helicobacter pylori 35A hypothetical protein YP_005769432.1 281346 D 585535 CDS YP_005769433.1 384895444 12348908 283125..283685 1 NC_017360.1 hypothetical protein 283685 12348908 HMPREF4655_20283 Helicobacter pylori 35A hypothetical protein YP_005769433.1 283125 D 585535 CDS YP_005769434.1 384895445 12348909 283710..283970 1 NC_017360.1 hypothetical protein 283970 12348909 HMPREF4655_20284 Helicobacter pylori 35A hypothetical protein YP_005769434.1 283710 D 585535 CDS YP_005769435.1 384895446 12348910 284052..284252 1 NC_017360.1 hypothetical protein 284252 12348910 HMPREF4655_20285 Helicobacter pylori 35A hypothetical protein YP_005769435.1 284052 D 585535 CDS YP_005769436.1 384895447 12348912 284724..284987 1 NC_017360.1 hypothetical protein 284987 12348912 HMPREF4655_20288 Helicobacter pylori 35A hypothetical protein YP_005769436.1 284724 D 585535 CDS YP_005769437.1 384895448 12348914 complement(287491..288276) 1 NC_017360.1 COG: COG0829; Pfam: PF01774; InterPro: IPR002669; urease accessory protein UreD 288276 ureD 12348914 ureD Helicobacter pylori 35A urease accessory protein UreD YP_005769437.1 287491 R 585535 CDS YP_005769438.1 384895449 12348915 complement(288276..288875) 1 NC_017360.1 COG: COG0378; Pfam: PF02492; InterPro: IPR004400; urease accessory protein UreG 288875 ureG 12348915 ureG Helicobacter pylori 35A urease accessory protein UreG YP_005769438.1 288276 R 585535 CDS YP_005769439.1 384895450 12348916 complement(288904..289674) 1 NC_017360.1 COG: COG0830; Pfam: PF01730; InterPro: IPR002639; urease accessory protein UreF 289674 ureF 12348916 ureF Helicobacter pylori 35A urease accessory protein UreF YP_005769439.1 288904 R 585535 CDS YP_005769440.1 384895451 12348917 complement(289686..290198) 1 NC_017360.1 COG: COG2371; Pfam: PF02814, PF05194; InterPro: IPR007864; urease accessory protein UreE 290198 ureE 12348917 ureE Helicobacter pylori 35A urease accessory protein UreE YP_005769440.1 289686 R 585535 CDS YP_005769441.1 384895452 12348918 complement(290200..290808) 1 NC_017360.1 Pfam: PF02293; InterPro: IPR003211; urease accessory protein / pH-dependent urea-transporter 290808 ureI 12348918 ureI Helicobacter pylori 35A urease accessory protein / pH-dependent urea-transporter YP_005769441.1 290200 R 585535 CDS YP_005769442.1 384895453 12348919 290846..290983 1 NC_017360.1 hypothetical protein 290983 12348919 HMPREF4655_20298 Helicobacter pylori 35A hypothetical protein YP_005769442.1 290846 D 585535 CDS YP_005769443.1 384895454 12348920 complement(290980..292689) 1 NC_017360.1 COG: COG0804; Pfam: PF00449, PF01979; InterPro: IPR005848; urease subunit beta 292689 ureB 12348920 ureB Helicobacter pylori 35A urease subunit beta YP_005769443.1 290980 R 585535 CDS YP_005769444.1 384895455 12348921 complement(292693..293409) 1 NC_017360.1 COG: COG0832; Pfam: PF00547, PF00699; InterPro: IPR002019; urease subunit gamma 293409 ureA 12348921 ureA Helicobacter pylori 35A urease subunit gamma YP_005769444.1 292693 R 585535 CDS YP_005769445.1 384895456 12348923 complement(293782..294255) 1 NC_017360.1 COG: COG0597; Pfam: PF01252; InterPro: IPR001872; signal peptidase II 294255 lspA 12348923 lspA Helicobacter pylori 35A signal peptidase II YP_005769445.1 293782 R 585535 CDS YP_005769446.1 384895457 12348924 complement(294249..295586) 1 NC_017360.1 COG: COG1109; Pfam: PF02878, PF02879, PF02880, PF00408; InterPro: IPR006352; phosphoglucosamine mutase 295586 glmM 12348924 glmM Helicobacter pylori 35A phosphoglucosamine mutase YP_005769446.1 294249 R 585535 CDS YP_005769447.1 384895458 12348925 295676..295945 1 NC_017360.1 COG: COG0268; Pfam: PF01649; InterPro: IPR002583; 30S ribosomal protein S20 295945 rpsT 12348925 rpsT Helicobacter pylori 35A 30S ribosomal protein S20 YP_005769447.1 295676 D 585535 CDS YP_005769448.1 384895459 12348926 296062..297120 1 NC_017360.1 COG: COG0216; Pfam: PF03462, PF00472; InterPro: IPR004373; peptide chain release factor RF1 297120 prfA 12348926 prfA Helicobacter pylori 35A peptide chain release factor RF1 YP_005769448.1 296062 D 585535 CDS YP_005769449.1 384895460 12348927 297539..297835 1 NC_017360.1 reminiscent outer membrane protein HorA 297835 12348927 HMPREF4655_20305 Helicobacter pylori 35A reminiscent outer membrane protein HorA YP_005769449.1 297539 D 585535 CDS YP_005769450.1 384895461 12348929 299328..301034 1 NC_017360.1 hypothetical protein 301034 12348929 HMPREF4655_20309 Helicobacter pylori 35A hypothetical protein YP_005769450.1 299328 D 585535 CDS YP_005769451.1 384895462 12348930 301202..301504 1 NC_017360.1 hypothetical protein 301504 12348930 HMPREF4655_20310 Helicobacter pylori 35A hypothetical protein YP_005769451.1 301202 D 585535 CDS YP_005769452.1 384895463 12348931 complement(301475..303496) 1 NC_017360.1 COG: COG0840; Pfam: PF00672, PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 303496 tlpC 12348931 tlpC Helicobacter pylori 35A methyl-accepting chemotaxis protein YP_005769452.1 301475 R 585535 CDS YP_005769453.1 384895464 12348932 complement(303643..304032) 1 NC_017360.1 COG: COG0103; Pfam: PF00380; InterPro: IPR000754; 30S ribosomal protein S9 304032 rpsI 12348932 rpsI Helicobacter pylori 35A 30S ribosomal protein S9 YP_005769453.1 303643 R 585535 CDS YP_005769454.1 384895465 12348933 complement(304029..304454) 1 NC_017360.1 COG: COG0102; Pfam: PF00572; InterPro: IPR005823; 50S ribosomal protein L13 304454 rplM 12348933 rplM Helicobacter pylori 35A 50S ribosomal protein L13 YP_005769454.1 304029 R 585535 CDS YP_005769455.1 384895466 12348934 complement(304626..304814) 1 NC_017360.1 hypothetical protein 304814 12348934 HMPREF4655_20314 Helicobacter pylori 35A hypothetical protein YP_005769455.1 304626 R 585535 CDS YP_005769456.1 384895467 12348935 complement(304821..306173) 1 NC_017360.1 COG: COG0579; Pfam: PF01266; malate dehydrogenase (acceptor) 306173 mdh 12348935 mdh Helicobacter pylori 35A malate dehydrogenase (acceptor) YP_005769456.1 304821 R 585535 CDS YP_005769457.1 384895468 12348936 complement(306227..307603) 1 NC_017360.1 COG: COG0791; Pfam: PF00877; InterPro: IPR000064; hypothetical protein 307603 12348936 HMPREF4655_20316 Helicobacter pylori 35A hypothetical protein YP_005769457.1 306227 R 585535 CDS YP_005769458.1 384895469 12348937 complement(307624..309666) 1 NC_017360.1 COG: COG0568; Pfam: PF00140, PF04542, PF04539, PF04545; InterPro: IPR012760; DNA-directed RNA polymerase sigma subunit RpoD 309666 rpoD 12348937 rpoD Helicobacter pylori 35A DNA-directed RNA polymerase sigma subunit RpoD YP_005769458.1 307624 R 585535 CDS YP_005769459.1 384895470 12348938 309914..310498 1 NC_017360.1 PZ1b protein 310498 12348938 HMPREF4655_20318 Helicobacter pylori 35A PZ1b protein YP_005769459.1 309914 D 585535 CDS YP_005769460.1 384895471 12348939 310646..310939 1 NC_017360.1 PZ2b protein 310939 12348939 HMPREF4655_20319 Helicobacter pylori 35A PZ2b protein YP_005769460.1 310646 D 585535 CDS YP_005769461.1 384895472 12348941 312466..312696 1 NC_017360.1 hypothetical protein 312696 12348941 HMPREF4655_20322 Helicobacter pylori 35A hypothetical protein YP_005769461.1 312466 D 585535 CDS YP_005769462.1 384895473 12348942 312907..313035 1 NC_017360.1 hypothetical protein 313035 12348942 HMPREF4655_20323 Helicobacter pylori 35A hypothetical protein YP_005769462.1 312907 D 585535 CDS YP_005769463.1 384895474 12348943 313028..313267 1 NC_017360.1 COG: COG3451; DNA transfer protein 313267 virB4-2 12348943 virB4-2 Helicobacter pylori 35A DNA transfer protein YP_005769463.1 313028 D 585535 CDS YP_005769464.1 384895475 12348945 315457..317088 1 NC_017360.1 COG: COG0550; Pfam: PF01751, PF01131; InterPro: IPR000380; DNA topoisomerase TopA 317088 topA 12348945 topA Helicobacter pylori 35A DNA topoisomerase TopA YP_005769464.1 315457 D 585535 CDS YP_005769465.1 384895476 12348946 complement(317048..317245) 1 NC_017360.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 317245 12348946 HMPREF4655_20328 Helicobacter pylori 35A hypothetical protein YP_005769465.1 317048 R 585535 CDS YP_005769466.1 384895477 12348947 complement(317409..317534) 1 NC_017360.1 hypothetical protein 317534 12348947 HMPREF4655_20329 Helicobacter pylori 35A hypothetical protein YP_005769466.1 317409 R 585535 CDS YP_005769467.1 384895478 12348948 complement(317586..318446) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 318446 12348948 HMPREF4655_20330 Helicobacter pylori 35A outer membrane protein YP_005769467.1 317586 R 585535 CDS YP_005769468.1 384895479 12348949 complement(318646..318996) 1 NC_017360.1 COG: COG0292; Pfam: PF00453; InterPro: IPR005813; 50S ribosomal protein L20 318996 rplT 12348949 rplT Helicobacter pylori 35A 50S ribosomal protein L20 YP_005769468.1 318646 R 585535 CDS YP_005769469.1 384895480 12348950 complement(319091..319285) 1 NC_017360.1 COG: COG0291; Pfam: PF01632; InterPro: IPR001706; 50S ribosomal protein L35 319285 rpmI 12348950 rpmI Helicobacter pylori 35A 50S ribosomal protein L35 YP_005769469.1 319091 R 585535 CDS YP_005769470.1 384895481 12348951 complement(319266..319877) 1 NC_017360.1 COG: COG0290; Pfam: PF05198, PF00707; InterPro: IPR001288; translation initiation factor IF3 319877 infC 12348951 infC Helicobacter pylori 35A translation initiation factor IF3 YP_005769470.1 319266 R 585535 CDS YP_005769471.1 384895482 12348952 complement(319874..321712) 1 NC_017360.1 COG: COG0441; Pfam: PF07973, PF00587, PF03129; InterPro: IPR002320; threonine--tRNA ligase 321712 thrS 12348952 thrS Helicobacter pylori 35A threonine--tRNA ligase YP_005769471.1 319874 R 585535 CDS YP_005769472.1 384895483 12348953 322073..324511 1 NC_017360.1 COG: COG0574; Pfam: PF01326, PF00391, PF02896; InterPro: IPR006319; pyruvate, water dikinase 324511 ppsA 12348953 ppsA Helicobacter pylori 35A pyruvate, water dikinase YP_005769472.1 322073 D 585535 CDS YP_005769473.1 384895484 12348954 324609..325847 1 NC_017360.1 Pfam: PF05917; InterPro: IPR008592; hypothetical protein 325847 12348954 HMPREF4655_20336 Helicobacter pylori 35A hypothetical protein YP_005769473.1 324609 D 585535 CDS YP_005769474.1 384895485 12348955 326102..327181 1 NC_017360.1 Pfam: PF05917; InterPro: IPR008592; hypothetical protein 327181 12348955 HMPREF4655_20337 Helicobacter pylori 35A hypothetical protein YP_005769474.1 326102 D 585535 CDS YP_005769475.1 384895486 12348956 complement(327278..328207) 1 NC_017360.1 COG: COG0731; Pfam: PF04055; radical SAM domain-containing protein 328207 12348956 HMPREF4655_20338 Helicobacter pylori 35A radical SAM domain-containing protein YP_005769475.1 327278 R 585535 CDS YP_005769476.1 384895487 12348957 complement(328197..330407) 1 NC_017360.1 COG: COG0550; Pfam: PF01751, PF01131, PF01396; InterPro: IPR005733; DNA topoisomerase TopA 330407 topA2 12348957 topA2 Helicobacter pylori 35A DNA topoisomerase TopA YP_005769476.1 328197 R 585535 CDS YP_005769477.1 384895488 12348958 330573..332117 1 NC_017360.1 COG: COG1344; Pfam: PF00669, PF07196, PF00700; InterPro: IPR001492; flagellin B 332117 12348958 HMPREF4655_20340 Helicobacter pylori 35A flagellin B YP_005769477.1 330573 D 585535 CDS YP_005769478.1 384895489 12348959 332177..334063 1 NC_017360.1 COG: COG2604; Pfam: PF01973; InterPro: IPR002826; motility accessory factor 334063 maf 12348959 maf Helicobacter pylori 35A motility accessory factor YP_005769478.1 332177 D 585535 CDS YP_005769479.1 384895490 12348960 complement(334090..334386) 1 NC_017360.1 hypothetical protein 334386 12348960 HMPREF4655_20342 Helicobacter pylori 35A hypothetical protein YP_005769479.1 334090 R 585535 CDS YP_005769480.1 384895491 12348961 complement(334407..335036) 1 NC_017360.1 COG: COG0235; Pfam: PF00596; InterPro: IPR001303; L-fuculose phosphate aldolase 335036 12348961 HMPREF4655_20343 Helicobacter pylori 35A L-fuculose phosphate aldolase YP_005769480.1 334407 R 585535 CDS YP_005769481.1 384895492 12348962 335265..336095 1 NC_017360.1 COG: COG1420; InterPro: IPR011991; heat-inducible transcription repressor HrcA 336095 12348962 HMPREF4655_20344 Helicobacter pylori 35A heat-inducible transcription repressor HrcA YP_005769481.1 335265 D 585535 CDS YP_005769482.1 384895493 12348963 336095..336670 1 NC_017360.1 COG: COG0576; Pfam: PF01025; InterPro: IPR000740; co-chaperone GrpE 336670 grpE 12348963 grpE Helicobacter pylori 35A co-chaperone GrpE YP_005769482.1 336095 D 585535 CDS YP_005769483.1 384895494 12348964 336701..338563 1 NC_017360.1 COG: COG0443; Pfam: PF00012; InterPro: IPR012725; chaperone DnaK 338563 dnaK 12348964 dnaK Helicobacter pylori 35A chaperone DnaK YP_005769483.1 336701 D 585535 CDS YP_005769484.1 384895495 12348965 338821..339738 1 NC_017360.1 COG: COG0031; Pfam: PF00291; InterPro: IPR001926; cysteine synthase 339738 srpG 12348965 srpG Helicobacter pylori 35A cysteine synthase YP_005769484.1 338821 D 585535 CDS YP_005769485.1 384895496 12348966 339759..340901 1 NC_017360.1 COG: COG0626; Pfam: PF01053; InterPro: IPR000277; cystathionine gamma-synthase 340901 metB 12348966 metB Helicobacter pylori 35A cystathionine gamma-synthase YP_005769485.1 339759 D 585535 CDS YP_005769486.1 384895497 12348967 340936..341403 1 NC_017360.1 COG: COG1854; Pfam: PF02664; InterPro: IPR003815; S-ribosylhomocysteine lyase 341403 luxS 12348967 luxS Helicobacter pylori 35A S-ribosylhomocysteine lyase YP_005769486.1 340936 D 585535 CDS YP_005769487.1 384895498 12348968 341535..343280 1 NC_017360.1 COG: COG0737; Pfam: PF00149, PF02872; InterPro: IPR006179; phosphatase/nucleotidase 343280 cpdB 12348968 cpdB Helicobacter pylori 35A phosphatase/nucleotidase YP_005769487.1 341535 D 585535 CDS YP_005769488.1 384895499 12348969 343486..345183 1 NC_017360.1 Pfam: PF00672, PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 345183 tlpB 12348969 tlpB Helicobacter pylori 35A methyl-accepting chemotaxis protein YP_005769488.1 343486 D 585535 CDS YP_005769489.1 384895500 12348970 345214..345996 1 NC_017360.1 COG: COG0463; Pfam: PF00535; InterPro: IPR001173; glycosyl transferase family protein 345996 wbyL 12348970 wbyL Helicobacter pylori 35A glycosyl transferase family protein YP_005769489.1 345214 D 585535 CDS YP_005769490.1 384895501 12348971 complement(345979..346740) 1 NC_017360.1 Pfam: PF01856; outer membrane protein 346740 12348971 HMPREF4655_20353 Helicobacter pylori 35A outer membrane protein YP_005769490.1 345979 R 585535 CDS YP_005769491.1 384895502 12348972 complement(346873..347979) 1 NC_017360.1 COG: COG1636; Pfam: PF02677; InterPro: IPR003828; hypothetical protein 347979 12348972 HMPREF4655_20354 Helicobacter pylori 35A hypothetical protein YP_005769491.1 346873 R 585535 CDS YP_005769492.1 384895503 12348973 complement(347979..350006) 1 NC_017360.1 COG: COG0840; Pfam: PF00015; InterPro: IPR004089; methyl-accepting chemotaxis protein 350006 tlpA 12348973 tlpA Helicobacter pylori 35A methyl-accepting chemotaxis protein YP_005769492.1 347979 R 585535 CDS YP_005769493.1 384895504 12348974 350209..351669 1 NC_017360.1 COG: COG0498; Pfam: PF00291; InterPro: IPR004450; threonine synthase 351669 thrC 12348974 thrC Helicobacter pylori 35A threonine synthase YP_005769493.1 350209 D 585535 CDS YP_005769494.1 384895505 12348975 351775..352485 1 NC_017360.1 hypothetical protein 352485 12348975 HMPREF4655_20357 Helicobacter pylori 35A hypothetical protein YP_005769494.1 351775 D 585535 CDS YP_005769495.1 384895506 12348976 352724..352849 1 NC_017360.1 hypothetical protein 352849 12348976 HMPREF4655_20358 Helicobacter pylori 35A hypothetical protein YP_005769495.1 352724 D 585535 CDS YP_005769496.1 384895507 12348977 complement(352840..353784) 1 NC_017360.1 COG: COG1052; Pfam: PF00389, PF02826; InterPro: IPR015508; glycerate dehydrogenase 353784 hprA 12348977 hprA Helicobacter pylori 35A glycerate dehydrogenase YP_005769496.1 352840 R 585535 CDS YP_005769497.1 384895508 12348978 353857..354387 1 NC_017360.1 hypothetical protein 354387 12348978 HMPREF4655_20360 Helicobacter pylori 35A hypothetical protein YP_005769497.1 353857 D 585535 CDS YP_005769498.1 384895509 12348979 354486..355328 1 NC_017360.1 Pfam: PF01531; InterPro: IPR002516; alpha-1,2-fucosyltransferase 355328 12348979 HMPREF4655_20361 Helicobacter pylori 35A alpha-1,2-fucosyltransferase YP_005769498.1 354486 D 585535 CDS YP_005769499.1 384895510 12348980 complement(355396..356226) 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; site-specific DNA-methyltransferase (adenine-specific) 356226 mboIBM2 12348980 mboIBM2 Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005769499.1 355396 R 585535 CDS YP_005769500.1 384895511 12348981 complement(356567..357109) 1 NC_017360.1 Pfam: PF04556; InterPro: IPR007637; type II site-specific deoxyribonuclease 357109 mboIR 12348981 mboIR Helicobacter pylori 35A type II site-specific deoxyribonuclease YP_005769500.1 356567 R 585535 CDS YP_005769501.1 384895512 12348983 357534..358463 1 NC_017360.1 COG: COG0331; Pfam: PF00698; InterPro: IPR001227; malonyl-CoA-[acyl-carrier-protein] transacylase 358463 fabD 12348983 fabD Helicobacter pylori 35A malonyl-CoA-[acyl-carrier-protein] transacylase YP_005769501.1 357534 D 585535 CDS YP_005769502.1 384895513 12348984 358456..359169 1 NC_017360.1 COG: COG0775; Pfam: PF01048; InterPro: IPR000845; adenosylhomocysteine nucleosidase 359169 mtnN 12348984 mtnN Helicobacter pylori 35A adenosylhomocysteine nucleosidase YP_005769502.1 358456 D 585535 CDS YP_005769503.1 384895514 12348987 complement(361579..361869) 1 NC_017360.1 hypothetical protein 361869 12348987 HMPREF4655_20370 Helicobacter pylori 35A hypothetical protein YP_005769503.1 361579 R 585535 CDS YP_005769504.1 384895515 12348988 361890..362189 1 NC_017360.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 362189 12348988 HMPREF4655_20371 Helicobacter pylori 35A hypothetical protein YP_005769504.1 361890 D 585535 CDS YP_005769505.1 384895516 12348989 362475..363344 1 NC_017360.1 hypothetical protein 363344 12348989 HMPREF4655_20372 Helicobacter pylori 35A hypothetical protein YP_005769505.1 362475 D 585535 CDS YP_005769506.1 384895517 12348990 complement(363740..363928) 1 NC_017360.1 hypothetical protein 363928 12348990 HMPREF4655_20373 Helicobacter pylori 35A hypothetical protein YP_005769506.1 363740 R 585535 CDS YP_005769507.1 384895518 12348991 363906..364160 1 NC_017360.1 hypothetical protein 364160 12348991 HMPREF4655_20374 Helicobacter pylori 35A hypothetical protein YP_005769507.1 363906 D 585535 CDS YP_005769508.1 384895519 12348992 complement(364210..365577) 1 NC_017360.1 COG: COG1760; Pfam: PF03315, PF03313; InterPro: IPR004644; L-serine ammonia-lyase 365577 sdaA 12348992 sdaA Helicobacter pylori 35A L-serine ammonia-lyase YP_005769508.1 364210 R 585535 CDS YP_005769509.1 384895520 12348993 complement(365577..366818) 1 NC_017360.1 COG: COG0814; Pfam: PF01490; InterPro: IPR004694; HAAAP family serine/threonine permease 366818 sdaC 12348993 sdaC Helicobacter pylori 35A HAAAP family serine/threonine permease YP_005769509.1 365577 R 585535 CDS YP_005769510.1 384895521 12348994 366990..368348 1 NC_017360.1 COG: COG3200; Pfam: PF01474; InterPro: IPR002480; phospho-2-dehydro-3-deoxyheptonate aldolase 368348 aroF 12348994 aroF Helicobacter pylori 35A phospho-2-dehydro-3-deoxyheptonate aldolase YP_005769510.1 366990 D 585535 CDS YP_005769511.1 384895522 12348995 368427..368561 1 NC_017360.1 hypothetical protein 368561 12348995 HMPREF4655_20378 Helicobacter pylori 35A hypothetical protein YP_005769511.1 368427 D 585535 CDS YP_005769512.1 384895523 12348996 complement(368789..369247) 1 NC_017360.1 COG: COG1225; Pfam: PF00578; InterPro: IPR012335; peroxiredoxin 369247 bcp 12348996 bcp Helicobacter pylori 35A peroxiredoxin YP_005769512.1 368789 R 585535 CDS YP_005769513.1 384895524 12348997 complement(369257..369892) 1 NC_017360.1 COG: COG1556; Pfam: PF02589; InterPro: IPR003741; hypothetical protein 369892 12348997 HMPREF4655_20380 Helicobacter pylori 35A hypothetical protein YP_005769513.1 369257 R 585535 CDS YP_005769514.1 384895525 12348998 complement(369885..371330) 1 NC_017360.1 COG: COG1139; Pfam: PF02589, PF00037; InterPro: IPR004452; iron-sulfur cluster-binding protein 371330 12348998 HMPREF4655_20381 Helicobacter pylori 35A iron-sulfur cluster-binding protein YP_005769514.1 369885 R 585535 CDS YP_005769515.1 384895526 12348999 complement(371359..372123) 1 NC_017360.1 COG: COG0247; Pfam: PF02754; InterPro: IPR004017; hypothetical protein 372123 12348999 HMPREF4655_20382 Helicobacter pylori 35A hypothetical protein YP_005769515.1 371359 R 585535 CDS YP_005769516.1 384895527 12349000 372313..373959 1 NC_017360.1 COG: COG1620; Pfam: PF02652; InterPro: IPR003804; L-lactate permease 373959 lctP 12349000 lctP Helicobacter pylori 35A L-lactate permease YP_005769516.1 372313 D 585535 CDS YP_005769517.1 384895528 12349001 374020..375675 1 NC_017360.1 COG: COG1620; Pfam: PF02652; InterPro: IPR003804; L-lactate permease 375675 lctP2 12349001 lctP2 Helicobacter pylori 35A L-lactate permease YP_005769517.1 374020 D 585535 CDS YP_005769518.1 384895529 12349002 complement(375699..376568) 1 NC_017360.1 COG: COG1194; Pfam: PF00730, PF00633; InterPro: IPR003265; A/G-specific adenine glycosylase 376568 mutY 12349002 mutY Helicobacter pylori 35A A/G-specific adenine glycosylase YP_005769518.1 375699 R 585535 CDS YP_005769519.1 384895530 12349003 complement(376686..378134) 1 NC_017360.1 COG: COG0471; Pfam: PF00939; InterPro: IPR001898; DASS family divalent anion:sodium (Na+) symporter 378134 citT 12349003 citT Helicobacter pylori 35A DASS family divalent anion:sodium (Na+) symporter YP_005769519.1 376686 R 585535 CDS YP_005769520.1 384895531 12349004 378304..379770 1 NC_017360.1 COG: COG3278; Pfam: PF00115; InterPro: IPR004677; cytochrome-c oxidase 379770 fixN 12349004 fixN Helicobacter pylori 35A cytochrome-c oxidase YP_005769520.1 378304 D 585535 CDS YP_005769521.1 384895532 12349005 379783..380481 1 NC_017360.1 COG: COG2993; Pfam: PF02433; InterPro: IPR003468; cb-type cytochrome c oxidase subunit II 380481 ccoO 12349005 ccoO Helicobacter pylori 35A cb-type cytochrome c oxidase subunit II YP_005769521.1 379783 D 585535 CDS YP_005769522.1 384895533 12349006 380489..380710 1 NC_017360.1 COG: COG4736; InterPro: IPR014107; cb-type cytochrome c oxidase subunit IV 380710 12349006 HMPREF4655_20389 Helicobacter pylori 35A cb-type cytochrome c oxidase subunit IV YP_005769522.1 380489 D 585535 CDS YP_005769523.1 384895534 12349007 380712..381590 1 NC_017360.1 COG: COG2010; Pfam: PF00034; InterPro: IPR004678; cb-type cytochrome c oxidase subunit III 381590 ccoP 12349007 ccoP Helicobacter pylori 35A cb-type cytochrome c oxidase subunit III YP_005769523.1 380712 D 585535 CDS YP_005769524.1 384895535 12349008 381601..381807 1 NC_017360.1 hypothetical protein 381807 12349008 HMPREF4655_20391 Helicobacter pylori 35A hypothetical protein YP_005769524.1 381601 D 585535 CDS YP_005769525.1 384895536 12349009 381908..382492 1 NC_017360.1 hypothetical protein 382492 12349009 HMPREF4655_20392 Helicobacter pylori 35A hypothetical protein YP_005769525.1 381908 D 585535 CDS YP_005769526.1 384895537 12349010 382504..383085 1 NC_017360.1 hypothetical protein 383085 12349010 HMPREF4655_20393 Helicobacter pylori 35A hypothetical protein YP_005769526.1 382504 D 585535 CDS YP_005769527.1 384895538 12349011 383173..383940 1 NC_017360.1 hypothetical protein 383940 12349011 HMPREF4655_20394 Helicobacter pylori 35A hypothetical protein YP_005769527.1 383173 D 585535 CDS YP_005769528.1 384895539 12349012 complement(383937..384878) 1 NC_017360.1 COG: COG2107; Pfam: PF02642; InterPro: IPR003794; hypothetical protein 384878 12349012 HMPREF4655_20395 Helicobacter pylori 35A hypothetical protein YP_005769528.1 383937 R 585535 CDS YP_005769529.1 384895540 12349013 384902..385945 1 NC_017360.1 COG: COG0468; Pfam: PF00154; InterPro: IPR013765; recombination protein A 385945 recA 12349013 recA Helicobacter pylori 35A recombination protein A YP_005769529.1 384902 D 585535 CDS YP_005769530.1 384895541 12349014 385957..387237 1 NC_017360.1 COG: COG0148; Pfam: PF03952, PF00113; InterPro: IPR000941; enolase 387237 eno 12349014 eno Helicobacter pylori 35A enolase YP_005769530.1 385957 D 585535 CDS YP_005769531.1 384895542 12349015 387230..387505 1 NC_017360.1 hypothetical protein 387505 12349015 HMPREF4655_20398 Helicobacter pylori 35A hypothetical protein YP_005769531.1 387230 D 585535 CDS YP_005769532.1 384895543 12349016 387515..388117 1 NC_017360.1 hypothetical protein 388117 12349016 HMPREF4655_20399 Helicobacter pylori 35A hypothetical protein YP_005769532.1 387515 D 585535 CDS YP_005769533.1 384895544 12349017 388122..388610 1 NC_017360.1 COG: COG0703; Pfam: PF01202; InterPro: IPR000623; shikimate kinase 388610 aroK 12349017 aroK Helicobacter pylori 35A shikimate kinase YP_005769533.1 388122 D 585535 CDS YP_005769534.1 384895545 12349018 388632..389588 1 NC_017360.1 Pfam: PF02743; general glycosylation pathway protein 389588 12349018 HMPREF4655_20401 Helicobacter pylori 35A general glycosylation pathway protein YP_005769534.1 388632 D 585535 CDS YP_005769535.1 384895546 12349019 complement(389585..390703) 1 NC_017360.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide 1,2-glucosyltransferase 390703 rfaJ2 12349019 rfaJ2 Helicobacter pylori 35A lipopolysaccharide 1,2-glucosyltransferase YP_005769535.1 389585 R 585535 CDS YP_005769536.1 384895547 12349020 390857..391774 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 391774 hcpD 12349020 hcpD Helicobacter pylori 35A beta-lactamase YP_005769536.1 390857 D 585535 CDS YP_005769537.1 384895548 12349021 complement(392540..393262) 1 NC_017360.1 COG: COG0217; Pfam: PF01709; InterPro: IPR002876; hypothetical protein 393262 12349021 HMPREF4655_20404 Helicobacter pylori 35A hypothetical protein YP_005769537.1 392540 R 585535 CDS YP_005769538.1 384895549 12349022 complement(393263..394234) 1 NC_017360.1 COG: COG0113; Pfam: PF00490; InterPro: IPR013785; porphobilinogen synthase 394234 hemB 12349022 hemB Helicobacter pylori 35A porphobilinogen synthase YP_005769538.1 393263 R 585535 CDS YP_005769539.1 384895550 12349023 complement(394257..395588) 1 NC_017360.1 COG: COG0642; Pfam: PF00672, PF00512, PF02518; InterPro: IPR003660; sensor histidine kinase 395588 12349023 HMPREF4655_20406 Helicobacter pylori 35A sensor histidine kinase YP_005769539.1 394257 R 585535 CDS YP_005769540.1 384895551 12349024 complement(395614..396291) 1 NC_017360.1 COG: COG0745; Pfam: PF00072, PF00486; InterPro: IPR001789; DNA-binding response regulator 396291 racR 12349024 racR Helicobacter pylori 35A DNA-binding response regulator YP_005769540.1 395614 R 585535 CDS YP_005769541.1 384895552 12349025 complement(396525..397004) 1 NC_017360.1 hypothetical protein 397004 12349025 HMPREF4655_20408 Helicobacter pylori 35A hypothetical protein YP_005769541.1 396525 R 585535 CDS YP_005769542.1 384895553 12349026 complement(396995..397258) 1 NC_017360.1 hypothetical protein 397258 12349026 HMPREF4655_20409 Helicobacter pylori 35A hypothetical protein YP_005769542.1 396995 R 585535 CDS YP_005769543.1 384895554 12349027 complement(397292..398572) 1 NC_017360.1 COG: COG0826; Pfam: PF01136; InterPro: IPR001539; U32 family peptidase 398572 12349027 HMPREF4655_20410 Helicobacter pylori 35A U32 family peptidase YP_005769543.1 397292 R 585535 CDS YP_005769544.1 384895555 12349028 complement(398575..399294) 1 NC_017360.1 hypothetical protein 399294 12349028 HMPREF4655_20411 Helicobacter pylori 35A hypothetical protein YP_005769544.1 398575 R 585535 CDS YP_005769545.1 384895556 12349029 complement(399365..400522) 1 NC_017360.1 COG: COG1186; Pfam: PF03462, PF00472; InterPro: IPR004374; peptide chain release factor RF2 400522 prfB 12349029 prfB Helicobacter pylori 35A peptide chain release factor RF2 YP_005769545.1 399365 R 585535 CDS YP_005769546.1 384895557 12349031 complement(400955..401722) 1 NC_017360.1 COG: COG1684; Pfam: PF01311; InterPro: IPR002010; flagellar biosynthetic protein FliR 401722 fliR 12349031 fliR Helicobacter pylori 35A flagellar biosynthetic protein FliR YP_005769546.1 400955 R 585535 CDS YP_005769547.1 384895558 12349032 complement(401716..402468) 1 NC_017360.1 Pfam: PF04401; InterPro: IPR007496; hypothetical protein 402468 12349032 HMPREF4655_20416 Helicobacter pylori 35A hypothetical protein YP_005769547.1 401716 R 585535 CDS YP_005769548.1 384895559 12349033 402924..403823 1 NC_017360.1 COG: COG0760; Pfam: PF00639; InterPro: IPR000297; peptidyl-prolyl cis-trans isomerase 403823 12349033 HMPREF4655_20417 Helicobacter pylori 35A peptidyl-prolyl cis-trans isomerase YP_005769548.1 402924 D 585535 CDS YP_005769549.1 384895560 12349034 403840..404763 1 NC_017360.1 COG: COG0191; Pfam: PF01116; InterPro: IPR000771; fructose-bisphosphate aldolase 404763 fbaB 12349034 fbaB Helicobacter pylori 35A fructose-bisphosphate aldolase YP_005769549.1 403840 D 585535 CDS YP_005769550.1 384895561 12349035 404785..405348 1 NC_017360.1 COG: COG0231; Pfam: PF08207, PF01132, PF09285; InterPro: IPR011768; elongation factor P 405348 efp 12349035 efp Helicobacter pylori 35A elongation factor P YP_005769550.1 404785 D 585535 CDS YP_005769551.1 384895562 12349036 complement(405888..406922) 1 NC_017360.1 COG: COG2089; Pfam: PF03102, PF08666; InterPro: IPR013785; pseudaminic acid synthase 406922 pseI 12349036 pseI Helicobacter pylori 35A pseudaminic acid synthase YP_005769551.1 405888 R 585535 CDS YP_005769552.1 384895563 12349037 complement(406926..407567) 1 NC_017360.1 COG: COG1136; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 407567 12349037 HMPREF4655_20421 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769552.1 406926 R 585535 CDS YP_005769553.1 384895564 12349038 complement(407567..408841) 1 NC_017360.1 COG: COG0815; Pfam: PF00795; InterPro: IPR004563; apolipoprotein N-acyltransferase 408841 lnt 12349038 lnt Helicobacter pylori 35A apolipoprotein N-acyltransferase YP_005769553.1 407567 R 585535 CDS YP_005769554.1 384895565 12349039 409066..409773 1 NC_017360.1 COG: COG1286; Pfam: PF02674; InterPro: IPR003825; hypothetical protein 409773 12349039 HMPREF4655_20423 Helicobacter pylori 35A hypothetical protein YP_005769554.1 409066 D 585535 CDS YP_005769555.1 384895566 12349040 409783..411288 1 NC_017360.1 COG: COG1190; Pfam: PF01336, PF00152; InterPro: IPR002313; lysine--tRNA ligase 411288 lysS 12349040 lysS Helicobacter pylori 35A lysine--tRNA ligase YP_005769555.1 409783 D 585535 CDS YP_005769556.1 384895567 12349041 411288..412538 1 NC_017360.1 COG: COG0112; Pfam: PF00464; InterPro: IPR001085; glycine hydroxymethyltransferase 412538 glyA 12349041 glyA Helicobacter pylori 35A glycine hydroxymethyltransferase YP_005769556.1 411288 D 585535 CDS YP_005769557.1 384895568 12349042 412549..413091 1 NC_017360.1 Pfam: PF08966, PF01896; InterPro: IPR015061; DNA primase small subunit domain protein 413091 12349042 HMPREF4655_20426 Helicobacter pylori 35A DNA primase small subunit domain protein YP_005769557.1 412549 D 585535 CDS YP_005769558.1 384895569 12349043 413113..413922 1 NC_017360.1 hypothetical protein 413922 12349043 HMPREF4655_20427 Helicobacter pylori 35A hypothetical protein YP_005769558.1 413113 D 585535 CDS YP_005769559.1 384895570 12349044 complement(414281..415822) 1 NC_017360.1 COG: COG1479; Pfam: PF03235, PF07510; InterPro: IPR011089; hypothetical protein 415822 12349044 HMPREF4655_20428 Helicobacter pylori 35A hypothetical protein YP_005769559.1 414281 R 585535 CDS YP_005769560.1 384895571 12349045 416126..416659 1 NC_017360.1 COG: COG2862; Pfam: PF03350; InterPro: IPR005134; membrane protein 416659 12349045 HMPREF4655_20429 Helicobacter pylori 35A membrane protein YP_005769560.1 416126 D 585535 CDS YP_005769561.1 384895572 12349046 complement(416665..418173) 1 NC_017360.1 COG: COG1502; Pfam: PF00614; phospholipase D 418173 12349046 HMPREF4655_20430 Helicobacter pylori 35A phospholipase D YP_005769561.1 416665 R 585535 CDS YP_005769562.1 384895573 12349047 complement(418195..418932) 1 NC_017360.1 COG: COG0479; Pfam: PF00111, PF00037; InterPro: IPR004489; succinate dehydrogenase 418932 frdB 12349047 frdB Helicobacter pylori 35A succinate dehydrogenase YP_005769562.1 418195 R 585535 CDS YP_005769563.1 384895574 12349048 complement(418925..421069) 1 NC_017360.1 COG: COG1053; Pfam: PF00890, PF02910; InterPro: IPR014006; succinate dehydrogenase 421069 frdA 12349048 frdA Helicobacter pylori 35A succinate dehydrogenase YP_005769563.1 418925 R 585535 CDS YP_005769564.1 384895575 12349049 complement(421079..421894) 1 NC_017360.1 COG: COG2009; Pfam: PF02967; InterPro: IPR004224; fumarate reductase respiratory complex 421894 frdC 12349049 frdC Helicobacter pylori 35A fumarate reductase respiratory complex YP_005769564.1 421079 R 585535 CDS YP_005769565.1 384895576 12349050 422059..422763 1 NC_017360.1 COG: COG0149; Pfam: PF00121; InterPro: IPR013785; triose-phosphate isomerase 422763 tpiA 12349050 tpiA Helicobacter pylori 35A triose-phosphate isomerase YP_005769565.1 422059 D 585535 CDS YP_005769566.1 384895577 12349051 422773..423600 1 NC_017360.1 COG: COG0623; InterPro: IPR014358; enoyl-ACP reductase 423600 fabI 12349051 fabI Helicobacter pylori 35A enoyl-ACP reductase YP_005769566.1 422773 D 585535 CDS YP_005769567.1 384895578 12349052 423610..424620 1 NC_017360.1 COG: COG1044; Pfam: PF04613, PF00132; InterPro: IPR007691; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 424620 lpxD 12349052 lpxD Helicobacter pylori 35A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase YP_005769567.1 423610 D 585535 CDS YP_005769568.1 384895579 12349053 424685..425842 1 NC_017360.1 COG: COG0192; Pfam: PF00438, PF02772, PF02773; InterPro: IPR002133; methionine adenosyltransferase 425842 metK 12349053 metK Helicobacter pylori 35A methionine adenosyltransferase YP_005769568.1 424685 D 585535 CDS YP_005769569.1 384895580 12349054 425909..426322 1 NC_017360.1 COG: COG0105; Pfam: PF00334; InterPro: IPR001564; nucleoside-diphosphate kinase 426322 ndk 12349054 ndk Helicobacter pylori 35A nucleoside-diphosphate kinase YP_005769569.1 425909 D 585535 CDS YP_005769570.1 384895581 12349055 426349..426705 1 NC_017360.1 hypothetical protein 426705 12349055 HMPREF4655_20439 Helicobacter pylori 35A hypothetical protein YP_005769570.1 426349 D 585535 CDS YP_005769571.1 384895582 12349056 426721..426867 1 NC_017360.1 COG: COG0333; Pfam: PF01783; InterPro: IPR002677; 50S ribosomal protein L32 426867 rpmF 12349056 rpmF Helicobacter pylori 35A 50S ribosomal protein L32 YP_005769571.1 426721 D 585535 CDS YP_005769572.1 384895583 12349057 426945..427964 1 NC_017360.1 COG: COG0416; Pfam: PF02504; InterPro: IPR003664; fatty acid/phospholipid synthesis protein PlsX 427964 plsX 12349057 plsX Helicobacter pylori 35A fatty acid/phospholipid synthesis protein PlsX YP_005769572.1 426945 D 585535 CDS YP_005769573.1 384895584 12349058 427989..428981 1 NC_017360.1 COG: COG0332; Pfam: PF08545, PF08541; InterPro: IPR004655; beta-ketoacyl-acyl-carrier-protein synthase III 428981 fabH 12349058 fabH Helicobacter pylori 35A beta-ketoacyl-acyl-carrier-protein synthase III YP_005769573.1 427989 D 585535 CDS YP_005769574.1 384895585 12349059 429002..429304 1 NC_017360.1 hypothetical protein 429304 12349059 HMPREF4655_20443 Helicobacter pylori 35A hypothetical protein YP_005769574.1 429002 D 585535 CDS YP_005769575.1 384895586 12349060 complement(429594..429977) 1 NC_017360.1 hypothetical protein 429977 12349060 HMPREF4655_20444 Helicobacter pylori 35A hypothetical protein YP_005769575.1 429594 R 585535 CDS YP_005769576.1 384895587 12349062 432926..434032 1 NC_017360.1 COG: COG0489; Pfam: PF01883; InterPro: IPR002744; ATP/GTP-binding protein 434032 mrp 12349062 mrp Helicobacter pylori 35A ATP/GTP-binding protein YP_005769576.1 432926 D 585535 CDS YP_005769577.1 384895588 12349063 complement(434046..435065) 1 NC_017360.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; lipopolysaccharide biosynthesis protein 435065 rfaJ3 12349063 rfaJ3 Helicobacter pylori 35A lipopolysaccharide biosynthesis protein YP_005769577.1 434046 R 585535 CDS YP_005769578.1 384895589 12349064 complement(435089..435202) 1 NC_017360.1 Pfam: PF01501; lipopolysaccharide biosynthesis protein 435202 rfaJ4 12349064 rfaJ4 Helicobacter pylori 35A lipopolysaccharide biosynthesis protein YP_005769578.1 435089 R 585535 CDS YP_005769579.1 384895590 12349065 435313..436716 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; outer membrane protein HofA 436716 12349065 HMPREF4655_20450 Helicobacter pylori 35A outer membrane protein HofA YP_005769579.1 435313 D 585535 CDS YP_005769580.1 384895591 12349066 436820..438685 1 NC_017360.1 COG: COG0326; Pfam: PF02518, PF00183; InterPro: IPR001404; chaperone HtpG 438685 htpG 12349066 htpG Helicobacter pylori 35A chaperone HtpG YP_005769580.1 436820 D 585535 CDS YP_005769581.1 384895592 12349067 complement(438873..439625) 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 439625 hcpA 12349067 hcpA Helicobacter pylori 35A beta-lactamase YP_005769581.1 438873 R 585535 CDS YP_005769582.1 384895593 12349068 complement(440079..441296) 1 NC_017360.1 COG: COG0624; Pfam: PF01546, PF07687; InterPro: IPR005941; succinyl-diaminopimelate desuccinylase 441296 dapE 12349068 dapE Helicobacter pylori 35A succinyl-diaminopimelate desuccinylase YP_005769582.1 440079 R 585535 CDS YP_005769583.1 384895594 12349069 complement(441256..443121) 1 NC_017360.1 COG: COG0445; Pfam: PF01134; InterPro: IPR004416; tRNA uridine 5-carboxymethylaminomethyl modification protein GidA 443121 gidA 12349069 gidA Helicobacter pylori 35A tRNA uridine 5-carboxymethylaminomethyl modification protein GidA YP_005769583.1 441256 R 585535 CDS YP_005769584.1 384895595 12349070 443217..444875 1 NC_017360.1 COG: COG0471; Pfam: PF00939; InterPro: IPR001898; sodium-dependent transporter 444875 hunaDC 12349070 hunaDC Helicobacter pylori 35A sodium-dependent transporter YP_005769584.1 443217 D 585535 CDS YP_005769585.1 384895596 12349071 444888..445688 1 NC_017360.1 COG: COG0575; Pfam: PF01148; InterPro: IPR000374; phosphatidate cytidylyltransferase 445688 cdsA 12349071 cdsA Helicobacter pylori 35A phosphatidate cytidylyltransferase YP_005769585.1 444888 D 585535 CDS YP_005769586.1 384895597 12349072 445689..446795 1 NC_017360.1 COG: COG0743; Pfam: PF02670, PF08436; InterPro: IPR003821; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 446795 dxr 12349072 dxr Helicobacter pylori 35A 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005769586.1 445689 D 585535 CDS YP_005769587.1 384895598 12349074 complement(448003..448617) 1 NC_017360.1 COG: COG1881; Pfam: PF01161; InterPro: IPR008914; phospholipid-binding protein 448617 12349074 HMPREF4655_20460 Helicobacter pylori 35A phospholipid-binding protein YP_005769587.1 448003 R 585535 CDS YP_005769588.1 384895599 12349075 448699..449160 1 NC_017360.1 hypothetical protein 449160 12349075 HMPREF4655_20461 Helicobacter pylori 35A hypothetical protein YP_005769588.1 448699 D 585535 CDS YP_005769589.1 384895600 12349076 449332..450495 1 NC_017360.1 COG: COG1104; Pfam: PF00266; InterPro: IPR000192; cysteine desulfurase 450495 iscS 12349076 iscS Helicobacter pylori 35A cysteine desulfurase YP_005769589.1 449332 D 585535 CDS YP_005769590.1 384895601 12349077 450517..451497 1 NC_017360.1 Pfam: PF01592, PF04324, PF01106; InterPro: IPR002871; NifU family protein 451497 12349077 HMPREF4655_20463 Helicobacter pylori 35A NifU family protein YP_005769590.1 450517 D 585535 CDS YP_005769591.1 384895602 12349078 451649..451822 1 NC_017360.1 hypothetical protein 451822 12349078 HMPREF4655_20464 Helicobacter pylori 35A hypothetical protein YP_005769591.1 451649 D 585535 CDS YP_005769592.1 384895603 12349079 451969..453339 1 NC_017360.1 COG: COG1066; InterPro: IPR004504; DNA repair protein RadA 453339 12349079 HMPREF4655_20465 Helicobacter pylori 35A DNA repair protein RadA YP_005769592.1 451969 D 585535 CDS YP_005769593.1 384895604 12349080 453463..454542 1 NC_017360.1 COG: COG0225; Pfam: PF01625, PF01641; InterPro: IPR002569; peptide-methionine (R)-S-oxide reductase 454542 msrAB 12349080 msrAB Helicobacter pylori 35A peptide-methionine (R)-S-oxide reductase YP_005769593.1 453463 D 585535 CDS YP_005769594.1 384895605 12349081 454674..454877 1 NC_017360.1 FtsH protease regulator HflK 454877 hflK 12349081 hflK Helicobacter pylori 35A FtsH protease regulator HflK YP_005769594.1 454674 D 585535 CDS YP_005769595.1 384895606 12349082 complement(455142..455975) 1 NC_017360.1 COG: COG0730; Pfam: PF01925; InterPro: IPR002781; integral membrane protein 455975 12349082 HMPREF4655_20468 Helicobacter pylori 35A integral membrane protein YP_005769595.1 455142 R 585535 CDS YP_005769596.1 384895607 12349083 complement(456148..458319) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 458319 12349083 HMPREF4655_20469 Helicobacter pylori 35A outer membrane protein YP_005769596.1 456148 R 585535 CDS YP_005769597.1 384895608 12349084 458473..459645 1 NC_017360.1 COG: COG0659; Pfam: PF00916; InterPro: IPR011547; sulfate permease 459645 12349084 HMPREF4655_20470 Helicobacter pylori 35A sulfate permease YP_005769597.1 458473 D 585535 CDS YP_005769598.1 384895609 12349086 complement(459878..461422) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 461422 12349086 HMPREF4655_20471 Helicobacter pylori 35A outer membrane protein YP_005769598.1 459878 R 585535 CDS YP_005769599.1 384895610 12349087 complement(461617..462342) 1 NC_017360.1 COG: COG1212; Pfam: PF02348; InterPro: IPR004528; 3-deoxy-manno-octulosonate cytidylyltransferase 462342 kdsB 12349087 kdsB Helicobacter pylori 35A 3-deoxy-manno-octulosonate cytidylyltransferase YP_005769599.1 461617 R 585535 CDS YP_005769600.1 384895611 12349088 462456..463253 1 NC_017360.1 COG: COG1651; disulfide isomerase 463253 12349088 HMPREF4655_20473 Helicobacter pylori 35A disulfide isomerase YP_005769600.1 462456 D 585535 CDS YP_005769601.1 384895612 12349089 463269..463919 1 NC_017360.1 motility protein 463919 12349089 HMPREF4655_20474 Helicobacter pylori 35A motility protein YP_005769601.1 463269 D 585535 CDS YP_005769602.1 384895613 12349090 463943..465115 1 NC_017360.1 COG: COG0754; Pfam: PF03738; InterPro: IPR005494; glutathionylspermidine synthase 465115 12349090 HMPREF4655_20475 Helicobacter pylori 35A glutathionylspermidine synthase YP_005769602.1 463943 D 585535 CDS YP_005769603.1 384895614 12349091 465115..465645 1 NC_017360.1 hypothetical protein 465645 12349091 HMPREF4655_20476 Helicobacter pylori 35A hypothetical protein YP_005769603.1 465115 D 585535 CDS YP_005769604.1 384895615 12349092 465620..465811 1 NC_017360.1 hypothetical protein 465811 12349092 HMPREF4655_20477 Helicobacter pylori 35A hypothetical protein YP_005769604.1 465620 D 585535 CDS YP_005769605.1 384895616 12349093 465829..465987 1 NC_017360.1 hypothetical protein 465987 12349093 HMPREF4655_20478 Helicobacter pylori 35A hypothetical protein YP_005769605.1 465829 D 585535 CDS YP_005769606.1 384895617 12349094 complement(466096..467160) 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 467160 hcpE 12349094 hcpE Helicobacter pylori 35A beta-lactamase YP_005769606.1 466096 R 585535 CDS YP_005769607.1 384895618 12349095 complement(467256..467627) 1 NC_017360.1 hypothetical protein 467627 12349095 HMPREF4655_20480 Helicobacter pylori 35A hypothetical protein YP_005769607.1 467256 R 585535 CDS YP_005769608.1 384895619 12349096 complement(467627..468547) 1 NC_017360.1 COG: COG0181; Pfam: PF01379, PF03900; InterPro: IPR000860; hydroxymethylbilane synthase 468547 hemC 12349096 hemC Helicobacter pylori 35A hydroxymethylbilane synthase YP_005769608.1 467627 R 585535 CDS YP_005769609.1 384895620 12349097 complement(468558..470291) 1 NC_017360.1 COG: COG0442; Pfam: PF00587, PF04073, PF03129; InterPro: IPR004500; proline--tRNA ligase 470291 proS 12349097 proS Helicobacter pylori 35A proline--tRNA ligase YP_005769609.1 468558 R 585535 CDS YP_005769610.1 384895621 12349098 complement(470295..471644) 1 NC_017360.1 COG: COG0373; Pfam: PF05201, PF01488, PF00745; InterPro: IPR000343; glutamyl-tRNA reductase 471644 hemA 12349098 hemA Helicobacter pylori 35A glutamyl-tRNA reductase YP_005769610.1 470295 R 585535 CDS YP_005769611.1 384895622 12349099 complement(471644..472567) 1 NC_017360.1 COG: COG0142; Pfam: PF00348; InterPro: IPR008949; polyprenyl synthetase 472567 ispB 12349099 ispB Helicobacter pylori 35A polyprenyl synthetase YP_005769611.1 471644 R 585535 CDS YP_005769612.1 384895623 12349100 complement(472577..472972) 1 NC_017360.1 hypothetical protein 472972 12349100 HMPREF4655_20485 Helicobacter pylori 35A hypothetical protein YP_005769612.1 472577 R 585535 CDS YP_005769613.1 384895624 12349101 complement(472965..473249) 1 NC_017360.1 hypothetical protein 473249 12349101 HMPREF4655_20486 Helicobacter pylori 35A hypothetical protein YP_005769613.1 472965 R 585535 CDS YP_005769614.1 384895625 12349102 complement(473270..473704) 1 NC_017360.1 COG: COG0783; Pfam: PF00210; InterPro: IPR012347; DNA starvation/stationary phase protection protein DpsA 473704 dps 12349102 dps Helicobacter pylori 35A DNA starvation/stationary phase protection protein DpsA YP_005769614.1 473270 R 585535 CDS YP_005769615.1 384895626 12349103 complement(473910..475055) 1 NC_017360.1 COG: COG0642; Pfam: PF00512, PF02518; InterPro: IPR003594; sensor histidine kinase 475055 atoS 12349103 atoS Helicobacter pylori 35A sensor histidine kinase YP_005769615.1 473910 R 585535 CDS YP_005769616.1 384895627 12349104 complement(475052..475369) 1 NC_017360.1 hypothetical protein 475369 12349104 HMPREF4655_20489 Helicobacter pylori 35A hypothetical protein YP_005769616.1 475052 R 585535 CDS YP_005769617.1 384895628 12349105 complement(475366..476394) 1 NC_017360.1 COG: COG1706; Pfam: PF02119; InterPro: IPR001782; flagellar P-ring protein FlgI 476394 flgI 12349105 flgI Helicobacter pylori 35A flagellar P-ring protein FlgI YP_005769617.1 475366 R 585535 CDS YP_005769618.1 384895629 12349106 476583..478061 1 NC_017360.1 COG: COG0513; Pfam: PF00270, PF00271; InterPro: IPR014001; ATP-dependent RNA helicase DeaD 478061 deaD 12349106 deaD Helicobacter pylori 35A ATP-dependent RNA helicase DeaD YP_005769618.1 476583 D 585535 CDS YP_005769619.1 384895630 12349107 478082..479170 1 NC_017360.1 COG: COG0330; Pfam: PF01145; InterPro: IPR001107; hypothetical protein 479170 12349107 HMPREF4655_20492 Helicobacter pylori 35A hypothetical protein YP_005769619.1 478082 D 585535 CDS YP_005769620.1 384895631 12349108 479177..479716 1 NC_017360.1 hypothetical protein 479716 12349108 HMPREF4655_20493 Helicobacter pylori 35A hypothetical protein YP_005769620.1 479177 D 585535 CDS YP_005769621.1 384895632 12349109 complement(479791..481341) 1 NC_017360.1 Pfam: PF00005, PF08352; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 481341 oppD 12349109 oppD Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769621.1 479791 R 585535 CDS YP_005769622.1 384895633 12349112 482715..484160 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 484160 12349112 HMPREF4655_20497 Helicobacter pylori 35A outer membrane protein YP_005769622.1 482715 D 585535 CDS YP_005769623.1 384895634 12349113 484173..485591 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 485591 12349113 HMPREF4655_20498 Helicobacter pylori 35A outer membrane protein YP_005769623.1 484173 D 585535 CDS YP_005769624.1 384895635 12349114 485690..486925 1 NC_017360.1 COG: COG0104; Pfam: PF00709; InterPro: IPR001114; adenylosuccinate synthase 486925 purA 12349114 purA Helicobacter pylori 35A adenylosuccinate synthase YP_005769624.1 485690 D 585535 CDS YP_005769625.1 384895636 12349115 486922..487350 1 NC_017360.1 hypothetical protein 487350 12349115 HMPREF4655_20500 Helicobacter pylori 35A hypothetical protein YP_005769625.1 486922 D 585535 CDS YP_005769626.1 384895637 12349116 487343..488002 1 NC_017360.1 Pdp protein 488002 pdp 12349116 pdp Helicobacter pylori 35A Pdp protein YP_005769626.1 487343 D 585535 CDS YP_005769627.1 384895638 12349117 487999..489048 1 NC_017360.1 COG: COG0750; Pfam: PF02163; InterPro: IPR004387; RIP metalloprotease RseP 489048 rseP 12349117 rseP Helicobacter pylori 35A RIP metalloprotease RseP YP_005769627.1 487999 D 585535 CDS YP_005769628.1 384895639 12349118 489061..490323 1 NC_017360.1 COG: COG1570; Pfam: PF01336, PF02601; InterPro: IPR003753; exodeoxyribonuclease VII large subunit 490323 xseA 12349118 xseA Helicobacter pylori 35A exodeoxyribonuclease VII large subunit YP_005769628.1 489061 D 585535 CDS YP_005769629.1 384895640 12349119 490519..490707 1 NC_017360.1 endonuclease MjaVIP 490707 mjaVIP 12349119 mjaVIP Helicobacter pylori 35A endonuclease MjaVIP YP_005769629.1 490519 D 585535 CDS YP_005769630.1 384895641 12349120 490722..491990 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; adenine specific DNA methyltransferase 491990 hpaim 12349120 hpaim Helicobacter pylori 35A adenine specific DNA methyltransferase YP_005769630.1 490722 D 585535 CDS YP_005769631.1 384895642 12349121 492062..494632 1 NC_017360.1 COG: COG0542; Pfam: PF02861, PF00004, PF07724; InterPro: IPR003593; chaperone protein ClpB 494632 clpB 12349121 clpB Helicobacter pylori 35A chaperone protein ClpB YP_005769631.1 492062 D 585535 CDS YP_005769632.1 384895643 12349122 494686..495408 1 NC_017360.1 COG: COG0785; Pfam: PF02683; InterPro: IPR003834; cytochrome c biogenesis protein 495408 ccdA 12349122 ccdA Helicobacter pylori 35A cytochrome c biogenesis protein YP_005769632.1 494686 D 585535 CDS YP_005769633.1 384895644 12349123 495418..496554 1 NC_017360.1 COG: COG0044; dihydroorotase PyrC 496554 pyrC 12349123 pyrC Helicobacter pylori 35A dihydroorotase PyrC YP_005769633.1 495418 D 585535 CDS YP_005769634.1 384895645 12349124 496539..497768 1 NC_017360.1 COG: COG0402; Pfam: PF01979; InterPro: IPR006680; amidohydrolase 497768 12349124 HMPREF4655_20509 Helicobacter pylori 35A amidohydrolase YP_005769634.1 496539 D 585535 CDS YP_005769635.1 384895646 12349125 497796..498071 1 NC_017360.1 hypothetical protein 498071 12349125 HMPREF4655_20510 Helicobacter pylori 35A hypothetical protein YP_005769635.1 497796 D 585535 CDS YP_005769636.1 384895647 12349126 498081..499394 1 NC_017360.1 COG: COG0621; Pfam: PF00919, PF04055; InterPro: IPR005839; tRNA-I(6)A37 thiotransferase enzyme MiaB 499394 miaB 12349126 miaB Helicobacter pylori 35A tRNA-I(6)A37 thiotransferase enzyme MiaB YP_005769636.1 498081 D 585535 CDS YP_005769637.1 384895648 12349127 499434..500087 1 NC_017360.1 COG: COG2121; Pfam: PF04028; InterPro: IPR007172; hypothetical protein 500087 12349127 HMPREF4655_20512 Helicobacter pylori 35A hypothetical protein YP_005769637.1 499434 D 585535 CDS YP_005769638.1 384895649 12349128 500080..501060 1 NC_017360.1 hypothetical protein 501060 12349128 HMPREF4655_20513 Helicobacter pylori 35A hypothetical protein YP_005769638.1 500080 D 585535 CDS YP_005769639.1 384895650 12349129 501041..501583 1 NC_017360.1 hypothetical protein 501583 12349129 HMPREF4655_20514 Helicobacter pylori 35A hypothetical protein YP_005769639.1 501041 D 585535 CDS YP_005769640.1 384895651 12349130 501580..502119 1 NC_017360.1 hypothetical protein 502119 12349130 HMPREF4655_20515 Helicobacter pylori 35A hypothetical protein YP_005769640.1 501580 D 585535 CDS YP_005769641.1 384895652 12349131 502136..502534 1 NC_017360.1 COG: COG0727; Pfam: PF03692; InterPro: IPR005358; hypothetical protein 502534 12349131 HMPREF4655_20516 Helicobacter pylori 35A hypothetical protein YP_005769641.1 502136 D 585535 CDS YP_005769642.1 384895653 12349132 502571..503866 1 NC_017360.1 COG: COG0457; ATP-dependent nuclease 503866 addB 12349132 addB Helicobacter pylori 35A ATP-dependent nuclease YP_005769642.1 502571 D 585535 CDS YP_005769643.1 384895654 12349133 503854..504414 1 NC_017360.1 Indole-3-glycerol phosphate synthase 504414 trpC 12349133 trpC Helicobacter pylori 35A Indole-3-glycerol phosphate synthase YP_005769643.1 503854 D 585535 CDS YP_005769644.1 384895655 12349134 504470..504724 1 NC_017360.1 COG: COG1145; Pfam: PF00037; ferredoxin 504724 fdx 12349134 fdx Helicobacter pylori 35A ferredoxin YP_005769644.1 504470 D 585535 CDS YP_005769645.1 384895656 12349135 504734..506188 1 NC_017360.1 COG: COG0248; Pfam: PF02541; InterPro: IPR003695; ppx/GppA family phosphatase 506188 gppA 12349135 gppA Helicobacter pylori 35A ppx/GppA family phosphatase YP_005769645.1 504734 D 585535 CDS YP_005769646.1 384895657 12349136 506185..507195 1 NC_017360.1 COG: COG0859; Pfam: PF01075; InterPro: IPR011908; lipopolysaccharide heptosyltransferase I 507195 rfaC 12349136 rfaC Helicobacter pylori 35A lipopolysaccharide heptosyltransferase I YP_005769646.1 506185 D 585535 CDS YP_005769647.1 384895658 12349137 507162..508178 1 NC_017360.1 COG: COG1560; Pfam: PF03279; InterPro: IPR004960; lipid A biosynthesis lauroyl acyltransferase 508178 htrB 12349137 htrB Helicobacter pylori 35A lipid A biosynthesis lauroyl acyltransferase YP_005769647.1 507162 D 585535 CDS YP_005769648.1 384895659 12349138 complement(508239..509354) 1 NC_017360.1 COG: COG0343; Pfam: PF01702; InterPro: IPR002616; tRNA-guanine transglycosylase 509354 tgt 12349138 tgt Helicobacter pylori 35A tRNA-guanine transglycosylase YP_005769648.1 508239 R 585535 CDS YP_005769649.1 384895660 12349139 509405..510847 1 NC_017360.1 COG: COG3400; Pfam: PF02080; InterPro: IPR006037; hypothetical protein 510847 12349139 HMPREF4655_20524 Helicobacter pylori 35A hypothetical protein YP_005769649.1 509405 D 585535 CDS YP_005769650.1 384895661 12349140 510854..511885 1 NC_017360.1 COG: COG0337; Pfam: PF01761; InterPro: IPR016037; 3-dehydroquinate synthase 511885 aroB 12349140 aroB Helicobacter pylori 35A 3-dehydroquinate synthase YP_005769650.1 510854 D 585535 CDS YP_005769651.1 384895662 12349141 511876..513447 1 NC_017360.1 COG: COG0668; Pfam: PF00924; InterPro: IPR006685; mechanosensitive ion channel family protein 513447 12349141 HMPREF4655_20526 Helicobacter pylori 35A mechanosensitive ion channel family protein YP_005769651.1 511876 D 585535 CDS YP_005769652.1 384895663 12349142 513444..514700 1 NC_017360.1 COG: COG0621; Pfam: PF00919, PF04055; InterPro: IPR005839; 2-methylthioadenine synthase 514700 12349142 HMPREF4655_20527 Helicobacter pylori 35A 2-methylthioadenine synthase YP_005769652.1 513444 D 585535 CDS YP_005769653.1 384895664 12349143 514687..516339 1 NC_017360.1 COG: COG0465; Pfam: PF00004; InterPro: IPR003959; cell division protein (FtsH) 516339 ftsH 12349143 ftsH Helicobacter pylori 35A cell division protein (FtsH) YP_005769653.1 514687 D 585535 CDS YP_005769654.1 384895665 12349144 516336..516860 1 NC_017360.1 hypothetical protein 516860 12349144 HMPREF4655_20529 Helicobacter pylori 35A hypothetical protein YP_005769654.1 516336 D 585535 CDS YP_005769655.1 384895666 12349145 516873..517346 1 NC_017360.1 hypothetical protein 517346 12349145 HMPREF4655_20530 Helicobacter pylori 35A hypothetical protein YP_005769655.1 516873 D 585535 CDS YP_005769656.1 384895667 12349147 519239..520456 1 NC_017360.1 COG: COG0019; Pfam: PF02784, PF00278; InterPro: IPR002986; diaminopimelate decarboxylase 520456 lysA 12349147 lysA Helicobacter pylori 35A diaminopimelate decarboxylase YP_005769656.1 519239 D 585535 CDS YP_005769657.1 384895668 12349148 520461..520751 1 NC_017360.1 COG: COG1605; Pfam: PF01817; InterPro: IPR002701; chorismate mutase 520751 12349148 HMPREF4655_20534 Helicobacter pylori 35A chorismate mutase YP_005769657.1 520461 D 585535 CDS YP_005769658.1 384895669 12349149 520764..521636 1 NC_017360.1 COG: COG4866; hypothetical protein 521636 12349149 HMPREF4655_20535 Helicobacter pylori 35A hypothetical protein YP_005769658.1 520764 D 585535 CDS YP_005769659.1 384895670 12349150 521637..523322 1 NC_017360.1 COG: COG0147; Pfam: PF00425; InterPro: IPR005801; para-aminobenzoate synthase glutamine amidotransferase 523322 pabB 12349150 pabB Helicobacter pylori 35A para-aminobenzoate synthase glutamine amidotransferase YP_005769659.1 521637 D 585535 CDS YP_005769660.1 384895671 12349151 523512..524531 1 NC_017360.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; amidase 524531 amiE 12349151 amiE Helicobacter pylori 35A amidase YP_005769660.1 523512 D 585535 CDS YP_005769661.1 384895672 12349152 complement(524615..527101) 1 NC_017360.1 COG: COG1344; Pfam: PF00669; InterPro: IPR001029; flagellar hook-associated protein 3 527101 flgL 12349152 flgL Helicobacter pylori 35A flagellar hook-associated protein 3 YP_005769661.1 524615 R 585535 CDS YP_005769662.1 384895673 12349153 527333..527647 1 NC_017360.1 COG: COG0261; Pfam: PF00829; InterPro: IPR001787; 50S ribosomal protein L21 527647 rplU 12349153 rplU Helicobacter pylori 35A 50S ribosomal protein L21 YP_005769662.1 527333 D 585535 CDS YP_005769663.1 384895674 12349154 527662..527928 1 NC_017360.1 COG: COG0211; Pfam: PF01016; InterPro: IPR001684; 50S ribosomal protein L27 527928 rpmA 12349154 rpmA Helicobacter pylori 35A 50S ribosomal protein L27 YP_005769663.1 527662 D 585535 CDS YP_005769664.1 384895675 12349155 528045..529694 1 NC_017360.1 COG: COG0747; Pfam: PF00496; InterPro: IPR000914; dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, binding protein DppA 529694 hbpA 12349155 hbpA Helicobacter pylori 35A dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, binding protein DppA YP_005769664.1 528045 D 585535 CDS YP_005769665.1 384895676 12349156 529704..530708 1 NC_017360.1 COG: COG0601; Pfam: PF00528; InterPro: IPR000515; dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein DppB 530708 dppB 12349156 dppB Helicobacter pylori 35A dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein DppB YP_005769665.1 529704 D 585535 CDS YP_005769666.1 384895677 12349157 530708..531565 1 NC_017360.1 COG: COG1173; Pfam: PF00528; InterPro: IPR000515; dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein 531565 dppC 12349157 dppC Helicobacter pylori 35A dipeptide/oligopeptide/nickel (Ni2+) ABC superfamily ATP binding cassette transporter, membrane protein YP_005769666.1 530708 D 585535 CDS YP_005769667.1 384895678 12349158 531577..532440 1 NC_017360.1 COG: COG0444; Pfam: PF00005, PF08352; InterPro: IPR003593; nickel ABC superfamily ATP binding cassette transporter, ABC protein 532440 nikD 12349158 nikD Helicobacter pylori 35A nickel ABC superfamily ATP binding cassette transporter, ABC protein YP_005769667.1 531577 D 585535 CDS YP_005769668.1 384895679 12349159 532437..533243 1 NC_017360.1 COG: COG4608; Pfam: PF00005, PF08352; InterPro: IPR003593; nickel ABC superfamily ATP binding cassette transporter, ABC protein 533243 nikE 12349159 nikE Helicobacter pylori 35A nickel ABC superfamily ATP binding cassette transporter, ABC protein YP_005769668.1 532437 D 585535 CDS YP_005769669.1 384895680 12349160 533263..534345 1 NC_017360.1 COG: COG0536; Pfam: PF01018, PF01926; InterPro: IPR014100; obg family GTPase CgtA 534345 cgtA 12349160 cgtA Helicobacter pylori 35A obg family GTPase CgtA YP_005769669.1 533263 D 585535 CDS YP_005769670.1 384895681 12349161 534387..535382 1 NC_017360.1 hypothetical protein 535382 12349161 HMPREF4655_20547 Helicobacter pylori 35A hypothetical protein YP_005769670.1 534387 D 585535 CDS YP_005769671.1 384895682 12349162 535631..536185 1 NC_017360.1 hypothetical protein 536185 12349162 HMPREF4655_20548 Helicobacter pylori 35A hypothetical protein YP_005769671.1 535631 D 585535 CDS YP_005769672.1 384895683 12349163 536195..537487 1 NC_017360.1 COG: COG0001; Pfam: PF00202; InterPro: IPR004639; glutamate-1-semialdehyde 2,1-aminomutase 537487 hemL 12349163 hemL Helicobacter pylori 35A glutamate-1-semialdehyde 2,1-aminomutase YP_005769672.1 536195 D 585535 CDS YP_005769673.1 384895684 12349164 537480..537752 1 NC_017360.1 hypothetical protein 537752 12349164 HMPREF4655_20550 Helicobacter pylori 35A hypothetical protein YP_005769673.1 537480 D 585535 CDS YP_005769674.1 384895685 12349165 537778..538182 1 NC_017360.1 hypothetical protein 538182 12349165 HMPREF4655_20551 Helicobacter pylori 35A hypothetical protein YP_005769674.1 537778 D 585535 CDS YP_005769675.1 384895686 12349166 538266..539150 1 NC_017360.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; N-carbamoyl-D-amino acid amidohydrolase 539150 12349166 HMPREF4655_20552 Helicobacter pylori 35A N-carbamoyl-D-amino acid amidohydrolase YP_005769675.1 538266 D 585535 CDS YP_005769676.1 384895687 12349167 539163..540044 1 NC_017360.1 COG: COG0726; Pfam: PF01522; InterPro: IPR002509; polysaccharide deacetylase 540044 12349167 HMPREF4655_20553 Helicobacter pylori 35A polysaccharide deacetylase YP_005769676.1 539163 D 585535 CDS YP_005769677.1 384895688 12349168 complement(540096..540788) 1 NC_017360.1 type II site-specific deoxyribonuclease 540788 ddeIR 12349168 ddeIR Helicobacter pylori 35A type II site-specific deoxyribonuclease YP_005769677.1 540096 R 585535 CDS YP_005769678.1 384895689 12349169 complement(540799..541908) 1 NC_017360.1 COG: COG0863; Pfam: PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 541908 12349169 HMPREF4655_20555 Helicobacter pylori 35A DNA (cytosine-5-)-methyltransferase YP_005769678.1 540799 R 585535 CDS YP_005769679.1 384895690 12349170 542004..542372 1 NC_017360.1 hypothetical protein 542372 12349170 HMPREF4655_20556 Helicobacter pylori 35A hypothetical protein YP_005769679.1 542004 D 585535 CDS YP_005769680.1 384895691 12349171 542372..543337 1 NC_017360.1 COG: COG0523; Pfam: PF02492, PF07683; InterPro: IPR003495; cobalamin synthesis protein 543337 12349171 HMPREF4655_20557 Helicobacter pylori 35A cobalamin synthesis protein YP_005769680.1 542372 D 585535 CDS YP_005769681.1 384895692 12349172 complement(543343..544488) 1 NC_017360.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; nitrite extrusion protein NarK 544488 narK 12349172 narK Helicobacter pylori 35A nitrite extrusion protein NarK YP_005769681.1 543343 R 585535 CDS YP_005769682.1 384895693 12349173 complement(544987..545742) 1 NC_017360.1 COG: COG0748; Pfam: PF01243; InterPro: IPR012349; heme iron utilization protein 545742 12349173 HMPREF4655_20559 Helicobacter pylori 35A heme iron utilization protein YP_005769682.1 544987 R 585535 CDS YP_005769683.1 384895694 12349174 complement(545803..547428) 1 NC_017360.1 COG: COG0018; Pfam: PF03485, PF00750, PF05746; InterPro: IPR001278; arginine--tRNA ligase 547428 argS 12349174 argS Helicobacter pylori 35A arginine--tRNA ligase YP_005769683.1 545803 R 585535 CDS YP_005769684.1 384895695 12349175 complement(547431..547670) 1 NC_017360.1 Pfam: PF02416; InterPro: IPR003369; Sec-independent protein translocase protein TatA 547670 12349175 HMPREF4655_20561 Helicobacter pylori 35A Sec-independent protein translocase protein TatA YP_005769684.1 547431 R 585535 CDS YP_005769685.1 384895696 12349176 complement(547740..548360) 1 NC_017360.1 COG: COG0194; Pfam: PF00625; InterPro: IPR008145; guanylate kinase 548360 gmk 12349176 gmk Helicobacter pylori 35A guanylate kinase YP_005769685.1 547740 R 585535 CDS YP_005769686.1 384895697 12349177 complement(548353..549591) 1 NC_017360.1 hypothetical protein 549591 12349177 HMPREF4655_20563 Helicobacter pylori 35A hypothetical protein YP_005769686.1 548353 R 585535 CDS YP_005769687.1 384895698 12349178 complement(549604..549729) 1 NC_017360.1 hypothetical protein 549729 12349178 HMPREF4655_20564 Helicobacter pylori 35A hypothetical protein YP_005769687.1 549604 R 585535 CDS YP_005769688.1 384895699 12349179 549733..550275 1 NC_017360.1 COG: COG1502; Pfam: PF00614; membrane bound endonuclease 550275 nuc 12349179 nuc Helicobacter pylori 35A membrane bound endonuclease YP_005769688.1 549733 D 585535 CDS YP_005769689.1 384895700 12349180 complement(550283..551047) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 551047 12349180 HMPREF4655_20566 Helicobacter pylori 35A outer membrane protein YP_005769689.1 550283 R 585535 CDS YP_005769690.1 384895701 12349181 551150..551863 1 NC_017360.1 COG: COG2063; Pfam: PF02107; InterPro: IPR000527; flagellar L-ring protein FlgH 551863 flgH 12349181 flgH Helicobacter pylori 35A flagellar L-ring protein FlgH YP_005769690.1 551150 D 585535 CDS YP_005769691.1 384895702 12349182 551881..552564 1 NC_017360.1 COG: COG1083; Pfam: PF02348; InterPro: IPR003329; pseudaminic acid CMP-transferase 552564 pseF 12349182 pseF Helicobacter pylori 35A pseudaminic acid CMP-transferase YP_005769691.1 551881 D 585535 CDS YP_005769692.1 384895703 12349183 552555..553427 1 NC_017360.1 COG: COG3980; Pfam: PF02348; N-acylneuraminate cytidylyltransferase 553427 neuA2 12349183 neuA2 Helicobacter pylori 35A N-acylneuraminate cytidylyltransferase YP_005769692.1 552555 D 585535 CDS YP_005769693.1 384895704 12349184 553424..553966 1 NC_017360.1 COG: COG1670; Pfam: PF00583; InterPro: IPR016181; pseudaminic acid biosynthesis N-acetyl transferase 553966 pseH 12349184 pseH Helicobacter pylori 35A pseudaminic acid biosynthesis N-acetyl transferase YP_005769693.1 553424 D 585535 CDS YP_005769694.1 384895705 12349185 complement(553899..554837) 1 NC_017360.1 COG: COG1663; Pfam: PF02606; InterPro: IPR003758; tetraacyldisaccharide 4'-kinase 554837 lpxK 12349185 lpxK Helicobacter pylori 35A tetraacyldisaccharide 4'-kinase YP_005769694.1 553899 R 585535 CDS YP_005769695.1 384895706 12349186 complement(554834..555616) 1 NC_017360.1 COG: COG0171; Pfam: PF02540; InterPro: IPR003694; NAD(+) synthase 555616 nadE 12349186 nadE Helicobacter pylori 35A NAD(+) synthase YP_005769695.1 554834 R 585535 CDS YP_005769696.1 384895707 12349188 555864..556856 1 NC_017360.1 COG: COG0059; Pfam: PF07991, PF01450; InterPro: IPR013023; ketol-acid reductoisomerase 556856 ilvC 12349188 ilvC Helicobacter pylori 35A ketol-acid reductoisomerase YP_005769696.1 555864 D 585535 CDS YP_005769697.1 384895708 12349189 556875..557681 1 NC_017360.1 COG: COG2894; Pfam: PF01656; InterPro: IPR010223; septum site-determining protein MinD 557681 minD 12349189 minD Helicobacter pylori 35A septum site-determining protein MinD YP_005769697.1 556875 D 585535 CDS YP_005769698.1 384895709 12349190 557678..557911 1 NC_017360.1 COG: COG0851; Pfam: PF03776; InterPro: IPR005527; cell division topological specificity factor MinE 557911 minE 12349190 minE Helicobacter pylori 35A cell division topological specificity factor MinE YP_005769698.1 557678 D 585535 CDS YP_005769699.1 384895710 12349191 557923..558723 1 NC_017360.1 COG: COG0758; Pfam: PF02481; InterPro: IPR003488; DNA protecting protein DprA 558723 dprA 12349191 dprA Helicobacter pylori 35A DNA protecting protein DprA YP_005769699.1 557923 D 585535 CDS YP_005769700.1 384895711 12349192 558720..559124 1 NC_017360.1 COG: COG0816; Pfam: PF03652; InterPro: IPR005227; Holliday junction resolvase family protein 559124 12349192 HMPREF4655_20577 Helicobacter pylori 35A Holliday junction resolvase family protein YP_005769700.1 558720 D 585535 CDS YP_005769701.1 384895712 12349193 559197..559466 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; hypothetical protein 559466 12349193 HMPREF4655_20578 Helicobacter pylori 35A hypothetical protein YP_005769701.1 559197 D 585535 CDS YP_005769702.1 384895713 12349194 559655..559993 1 NC_017360.1 hypothetical protein 559993 12349194 HMPREF4655_20579 Helicobacter pylori 35A hypothetical protein YP_005769702.1 559655 D 585535 CDS YP_005769703.1 384895714 12349195 559977..560537 1 NC_017360.1 hypothetical protein 560537 12349195 HMPREF4655_20580 Helicobacter pylori 35A hypothetical protein YP_005769703.1 559977 D 585535 CDS YP_005769704.1 384895715 12349197 561254..561409 1 NC_017360.1 beta-lactamase HcpA 561409 hcpA2 12349197 hcpA2 Helicobacter pylori 35A beta-lactamase HcpA YP_005769704.1 561254 D 585535 CDS YP_005769705.1 384895716 12349198 561547..561933 1 NC_017360.1 Pfam: PF06961; InterPro: IPR010718; hypothetical protein 561933 12349198 HMPREF4655_20585 Helicobacter pylori 35A hypothetical protein YP_005769705.1 561547 D 585535 CDS YP_005769706.1 384895717 12349199 561933..562718 1 NC_017360.1 hypothetical protein 562718 12349199 HMPREF4655_20586 Helicobacter pylori 35A hypothetical protein YP_005769706.1 561933 D 585535 CDS YP_005769707.1 384895718 12349200 562708..563796 1 NC_017360.1 hypothetical protein 563796 12349200 HMPREF4655_20587 Helicobacter pylori 35A hypothetical protein YP_005769707.1 562708 D 585535 CDS YP_005769708.1 384895719 12349201 complement(563840..564721) 1 NC_017360.1 COG: COG0564; Pfam: PF00849; InterPro: IPR006145; pseudouridine synthase D 564721 12349201 HMPREF4655_20588 Helicobacter pylori 35A pseudouridine synthase D YP_005769708.1 563840 R 585535 CDS YP_005769709.1 384895720 12349202 complement(564721..566271) 1 NC_017360.1 COG: COG0608; Pfam: PF01368, PF02272; InterPro: IPR004610; single-stranded-DNA-specific exonuclease RecJ 566271 recJ 12349202 recJ Helicobacter pylori 35A single-stranded-DNA-specific exonuclease RecJ YP_005769709.1 564721 R 585535 CDS YP_005769710.1 384895721 12349203 complement(566280..567896) 1 NC_017360.1 COG: COG0504; Pfam: PF06418, PF00117; InterPro: IPR004468; CTP synthase 567896 pyrG 12349203 pyrG Helicobacter pylori 35A CTP synthase YP_005769710.1 566280 R 585535 CDS YP_005769711.1 384895722 12349204 568161..568823 1 NC_017360.1 hypothetical protein 568823 12349204 HMPREF4655_20591 Helicobacter pylori 35A hypothetical protein YP_005769711.1 568161 D 585535 CDS YP_005769712.1 384895723 12349205 568867..570570 1 NC_017360.1 COG: COG1766; Pfam: PF01514, PF08345; InterPro: IPR000067; flagellar M-ring protein FliF 570570 fliF 12349205 fliF Helicobacter pylori 35A flagellar M-ring protein FliF YP_005769712.1 568867 D 585535 CDS YP_005769713.1 384895724 12349206 570589..571620 1 NC_017360.1 COG: COG1536; Pfam: PF01706; InterPro: IPR000090; flagellar motor switch protein FliG 571620 fliG 12349206 fliG Helicobacter pylori 35A flagellar motor switch protein FliG YP_005769713.1 570589 D 585535 CDS YP_005769714.1 384895725 12349207 571607..572383 1 NC_017360.1 COG: COG1317; Pfam: PF02108; flagellar export protein 572383 fliH 12349207 fliH Helicobacter pylori 35A flagellar export protein YP_005769714.1 571607 D 585535 CDS YP_005769715.1 384895726 12349208 572380..574236 1 NC_017360.1 COG: COG1154; Pfam: PF02779, PF02780; InterPro: IPR005477; 1-deoxy-D-xylulose-5-phosphate synthase 574236 dxs 12349208 dxs Helicobacter pylori 35A 1-deoxy-D-xylulose-5-phosphate synthase YP_005769715.1 572380 D 585535 CDS YP_005769716.1 384895727 12349209 574233..576041 1 NC_017360.1 COG: COG0481; Pfam: PF00009, PF03144, PF00679, PF06421; InterPro: IPR006297; GTP-binding protein LepA 576041 lepA 12349209 lepA Helicobacter pylori 35A GTP-binding protein LepA YP_005769716.1 574233 D 585535 CDS YP_005769717.1 384895728 12349210 576056..576814 1 NC_017360.1 COG: COG5048; hypothetical protein 576814 12349210 HMPREF4655_20597 Helicobacter pylori 35A hypothetical protein YP_005769717.1 576056 D 585535 CDS YP_005769718.1 384895729 12349211 576846..577028 1 NC_017360.1 hypothetical protein 577028 12349211 HMPREF4655_20598 Helicobacter pylori 35A hypothetical protein YP_005769718.1 576846 D 585535 CDS YP_005769719.1 384895730 12349212 577122..577382 1 NC_017360.1 hypothetical protein 577382 12349212 HMPREF4655_20599 Helicobacter pylori 35A hypothetical protein YP_005769719.1 577122 D 585535 CDS YP_005769720.1 384895731 12349213 complement(577498..578307) 1 NC_017360.1 COG: COG4786; Pfam: PF00460; flagellar basal-body rod protein 578307 flgG2 12349213 flgG2 Helicobacter pylori 35A flagellar basal-body rod protein YP_005769720.1 577498 R 585535 CDS YP_005769721.1 384895732 12349214 complement(578357..579643) 1 NC_017360.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; alpha-ketoglutarate permease 579643 kgtP 12349214 kgtP Helicobacter pylori 35A alpha-ketoglutarate permease YP_005769721.1 578357 R 585535 CDS YP_005769722.1 384895733 12349215 complement(579806..582322) 1 NC_017360.1 COG: COG1674; Pfam: PF01580; InterPro: IPR002543; DNA translocase FtsK 582322 ftsK 12349215 ftsK Helicobacter pylori 35A DNA translocase FtsK YP_005769722.1 579806 R 585535 CDS YP_005769723.1 384895734 12349216 complement(582319..584655) 1 NC_017360.1 COG: COG3893; hypothetical protein 584655 12349216 HMPREF4655_20603 Helicobacter pylori 35A hypothetical protein YP_005769723.1 582319 R 585535 CDS YP_005769724.1 384895735 12349217 complement(584652..586577) 1 NC_017360.1 COG: COG0021; Pfam: PF00456, PF02779, PF02780; InterPro: IPR005478; transketolase 586577 tkt 12349217 tkt Helicobacter pylori 35A transketolase YP_005769724.1 584652 R 585535 CDS YP_005769725.1 384895736 12349218 complement(586624..587466) 1 NC_017360.1 COG: COG0196; Pfam: PF06574, PF01687; InterPro: IPR002606; riboflavin biosynthesis protein RibF 587466 ribF 12349218 ribF Helicobacter pylori 35A riboflavin biosynthesis protein RibF YP_005769725.1 586624 R 585535 CDS YP_005769726.1 384895737 12349219 complement(587432..588139) 1 NC_017360.1 COG: COG1189; Pfam: PF01479, PF01728; InterPro: IPR004538; ribosomal RNA large subunit methyltransferase J 588139 rrmJ 12349219 rrmJ Helicobacter pylori 35A ribosomal RNA large subunit methyltransferase J YP_005769726.1 587432 R 585535 CDS YP_005769727.1 384895738 12349220 complement(588139..588654) 1 NC_017360.1 hypothetical protein 588654 12349220 HMPREF4655_20607 Helicobacter pylori 35A hypothetical protein YP_005769727.1 588139 R 585535 CDS YP_005769728.1 384895739 12349221 588721..589644 1 NC_017360.1 COG: COG0540; Pfam: PF02729, PF00185; InterPro: IPR002082; aspartate carbamoyltransferase 589644 pyrB 12349221 pyrB Helicobacter pylori 35A aspartate carbamoyltransferase YP_005769728.1 588721 D 585535 CDS YP_005769729.1 384895740 12349222 589936..591375 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; outer membrane protein 591375 12349222 HMPREF4655_20609 Helicobacter pylori 35A outer membrane protein YP_005769729.1 589936 D 585535 CDS YP_005769730.1 384895741 12349223 591467..593122 1 NC_017360.1 COG: COG1132; Pfam: PF00664, PF00005; InterPro: IPR001140; lipid A export ATP-binding/permease MsbA 593122 msbA 12349223 msbA Helicobacter pylori 35A lipid A export ATP-binding/permease MsbA YP_005769730.1 591467 D 585535 CDS YP_005769731.1 384895742 12349224 593116..593739 1 NC_017360.1 hypothetical protein 593739 12349224 HMPREF4655_20611 Helicobacter pylori 35A hypothetical protein YP_005769731.1 593116 D 585535 CDS YP_005769732.1 384895743 12349225 593743..594312 1 NC_017360.1 COG: COG1787; Pfam: PF04471; InterPro: IPR007560; hypothetical protein 594312 12349225 HMPREF4655_20612 Helicobacter pylori 35A hypothetical protein YP_005769732.1 593743 D 585535 CDS YP_005769733.1 384895744 12349226 594423..595607 1 NC_017360.1 COG: COG1106; Pfam: PF02463; hypothetical protein 595607 12349226 HMPREF4655_20613 Helicobacter pylori 35A hypothetical protein YP_005769733.1 594423 D 585535 CDS YP_005769734.1 384895745 12349227 595600..596268 1 NC_017360.1 hypothetical protein 596268 12349227 HMPREF4655_20614 Helicobacter pylori 35A hypothetical protein YP_005769734.1 595600 D 585535 CDS YP_005769735.1 384895746 12349228 596342..597337 1 NC_017360.1 COG: COG3376; Pfam: PF03824; InterPro: IPR011541; high-affinity nickel-transporter 597337 nixA 12349228 nixA Helicobacter pylori 35A high-affinity nickel-transporter YP_005769735.1 596342 D 585535 CDS YP_005769736.1 384895747 12349229 complement(597341..597856) 1 NC_017360.1 hypothetical protein 597856 12349229 HMPREF4655_20616 Helicobacter pylori 35A hypothetical protein YP_005769736.1 597341 R 585535 CDS YP_005769737.1 384895748 12349230 597990..599300 1 NC_017360.1 hypothetical protein 599300 12349230 HMPREF4655_20617 Helicobacter pylori 35A hypothetical protein YP_005769737.1 597990 D 585535 CDS YP_005769738.1 384895749 12349231 599518..599796 1 NC_017360.1 hypothetical protein 599796 12349231 HMPREF4655_20618 Helicobacter pylori 35A hypothetical protein YP_005769738.1 599518 D 585535 CDS YP_005769739.1 384895750 12349232 complement(599985..600185) 1 NC_017360.1 Pfam: PF00403; InterPro: IPR006122; copper ion binding protein CopP 600185 copP 12349232 copP Helicobacter pylori 35A copper ion binding protein CopP YP_005769739.1 599985 R 585535 CDS YP_005769740.1 384895751 12349233 complement(600186..602384) 1 NC_017360.1 COG: COG2217; Pfam: PF00403, PF00122, PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase copper transporter 602384 copA 12349233 copA Helicobacter pylori 35A P-ATPase superfamily P-type ATPase copper transporter YP_005769740.1 600186 R 585535 CDS YP_005769741.1 384895752 12349234 complement(602408..603121) 1 NC_017360.1 COG: COG1183; Pfam: PF01066; InterPro: IPR004533; CDP-diacylglycerol--serine O-phosphatidyltransferase 603121 pssA 12349234 pssA Helicobacter pylori 35A CDP-diacylglycerol--serine O-phosphatidyltransferase YP_005769741.1 602408 R 585535 CDS YP_005769742.1 384895753 12349235 complement(603368..605266) 1 NC_017360.1 COG: COG0465; Pfam: PF06480, PF00004, PF01434; InterPro: IPR005936; cell division protein FtsH 605266 ftsH2 12349235 ftsH2 Helicobacter pylori 35A cell division protein FtsH YP_005769742.1 603368 R 585535 CDS YP_005769743.1 384895754 12349236 complement(605275..606264) 1 NC_017360.1 COG: COG2264; Pfam: PF06325; InterPro: IPR010456; 50S ribosomal protein L11 methyltransferase 606264 prmA 12349236 prmA Helicobacter pylori 35A 50S ribosomal protein L11 methyltransferase YP_005769743.1 605275 R 585535 CDS YP_005769744.1 384895755 12349237 complement(606265..606606) 1 NC_017360.1 COG: COG0784; Pfam: PF00072; InterPro: IPR001789; chemotaxis response regulator CheY 606606 cheY 12349237 cheY Helicobacter pylori 35A chemotaxis response regulator CheY YP_005769744.1 606265 R 585535 CDS YP_005769745.1 384895756 12349238 606929..607531 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HorD 607531 horD2 12349238 horD2 Helicobacter pylori 35A outer membrane protein HorD YP_005769745.1 606929 D 585535 CDS YP_005769746.1 384895757 12349240 complement(607663..608070) 1 NC_017360.1 hypothetical protein 608070 12349240 HMPREF4655_20626 Helicobacter pylori 35A hypothetical protein YP_005769746.1 607663 R 585535 CDS YP_005769747.1 384895758 12349241 complement(608073..608315) 1 NC_017360.1 hypothetical protein 608315 12349241 HMPREF4655_20627 Helicobacter pylori 35A hypothetical protein YP_005769747.1 608073 R 585535 CDS YP_005769748.1 384895759 12349242 complement(608309..608845) 1 NC_017360.1 COG: COG0357; Pfam: PF02527; InterPro: IPR003682; 16S rRNA methyltransferase GidB 608845 gidB 12349242 gidB Helicobacter pylori 35A 16S rRNA methyltransferase GidB YP_005769748.1 608309 R 585535 CDS YP_005769749.1 384895760 12349243 complement(608842..609879) 1 NC_017360.1 COG: COG0809; Pfam: PF02547; InterPro: IPR003699; S-adenosylmethionine--tRNA ribosyltransferase-isomerase 609879 queA 12349243 queA Helicobacter pylori 35A S-adenosylmethionine--tRNA ribosyltransferase-isomerase YP_005769749.1 608842 R 585535 CDS YP_005769750.1 384895761 12349244 complement(609880..610629) 1 NC_017360.1 COG: COG0805; Pfam: PF00902; InterPro: IPR002033; twin arginine-targeting protein translocase TatC 610629 tatC 12349244 tatC Helicobacter pylori 35A twin arginine-targeting protein translocase TatC YP_005769750.1 609880 R 585535 CDS YP_005769751.1 384895762 12349245 complement(610622..611104) 1 NC_017360.1 Pfam: PF02416; InterPro: IPR003998; sec-independent protein translocase TatB-like protein 611104 12349245 HMPREF4655_20631 Helicobacter pylori 35A sec-independent protein translocase TatB-like protein YP_005769751.1 610622 R 585535 CDS YP_005769752.1 384895763 12349246 complement(611172..612182) 1 NC_017360.1 COG: COG2255; Pfam: PF05496, PF00004, PF05491; InterPro: IPR004605; crossover junction ATP-dependent DNA helicase RuvB 612182 ruvB 12349246 ruvB Helicobacter pylori 35A crossover junction ATP-dependent DNA helicase RuvB YP_005769752.1 611172 R 585535 CDS YP_005769753.1 384895764 12349247 complement(612183..612995) 1 NC_017360.1 COG: COG0413; Pfam: PF02548; InterPro: IPR003700; 3-methyl-2-oxobutanoate hydroxymethyltransferase 612995 panB 12349247 panB Helicobacter pylori 35A 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_005769753.1 612183 R 585535 CDS YP_005769754.1 384895765 12349248 613144..613866 1 NC_017360.1 Pfam: PF01856; outer membrane protein 613866 12349248 HMPREF4655_20634 Helicobacter pylori 35A outer membrane protein YP_005769754.1 613144 D 585535 CDS YP_005769755.1 384895766 12349249 613856..614710 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 614710 12349249 HMPREF4655_20635 Helicobacter pylori 35A outer membrane protein YP_005769755.1 613856 D 585535 CDS YP_005769756.1 384895767 12349250 614719..615657 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 615657 12349250 HMPREF4655_20636 Helicobacter pylori 35A outer membrane protein YP_005769756.1 614719 D 585535 CDS YP_005769757.1 384895768 12349251 615667..616989 1 NC_017360.1 COG: COG0739; hypothetical protein 616989 12349251 HMPREF4655_20637 Helicobacter pylori 35A hypothetical protein YP_005769757.1 615667 D 585535 CDS YP_005769758.1 384895769 12349252 616992..617579 1 NC_017360.1 Pfam: PF03775; InterPro: IPR005526; septum site-determining protein MinC 617579 minC 12349252 minC Helicobacter pylori 35A septum site-determining protein MinC YP_005769758.1 616992 D 585535 CDS YP_005769759.1 384895770 12349253 617576..618463 1 NC_017360.1 COG: COG0774; Pfam: PF03331; InterPro: IPR004463; bifunctional UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase/(3R)-hydroxymyristoyl-[acyl-carrier- protein] dehydratase 618463 lpxC 12349253 lpxC Helicobacter pylori 35A bifunctional UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase/(3R)-hydroxymyristoyl-[acyl-carrier- protein] dehydratase YP_005769759.1 617576 D 585535 CDS YP_005769760.1 384895771 12349254 618485..618958 1 NC_017360.1 COG: COG1214; hypothetical protein 618958 yeaZ 12349254 yeaZ Helicobacter pylori 35A hypothetical protein YP_005769760.1 618485 D 585535 CDS YP_005769761.1 384895772 12349255 619013..619894 1 NC_017360.1 COG: COG0083; Pfam: PF00288; InterPro: IPR000870; homoserine kinase 619894 thrB 12349255 thrB Helicobacter pylori 35A homoserine kinase YP_005769761.1 619013 D 585535 CDS YP_005769762.1 384895773 12349256 619881..620135 1 NC_017360.1 COG: COG2740; Pfam: PF04296; InterPro: IPR007393; hypothetical protein 620135 12349256 HMPREF4655_20642 Helicobacter pylori 35A hypothetical protein YP_005769762.1 619881 D 585535 CDS YP_005769763.1 384895774 12349257 620132..622984 1 NC_017360.1 COG: COG0532; Pfam: PF04760, PF00009, PF03144; InterPro: IPR000178; translation initiation factor IF-2 622984 infB 12349257 infB Helicobacter pylori 35A translation initiation factor IF-2 YP_005769763.1 620132 D 585535 CDS YP_005769764.1 384895775 12349258 622984..623319 1 NC_017360.1 COG: COG0858; Pfam: PF02033; InterPro: IPR015946; ribosome-binding factor A 623319 rbfA 12349258 rbfA Helicobacter pylori 35A ribosome-binding factor A YP_005769764.1 622984 D 585535 CDS YP_005769765.1 384895776 12349259 623312..623752 1 NC_017360.1 COG: COG0779; Pfam: PF02576; InterPro: IPR003728; hypothetical protein 623752 12349259 HMPREF4655_20645 Helicobacter pylori 35A hypothetical protein YP_005769765.1 623312 D 585535 CDS YP_005769766.1 384895777 12349260 complement(623860..625848) 1 NC_017360.1 COG: COG0365; Pfam: PF00501; InterPro: IPR011904; acetate--CoA ligase 625848 acsA 12349260 acsA Helicobacter pylori 35A acetate--CoA ligase YP_005769766.1 623860 R 585535 CDS YP_005769767.1 384895778 12349261 626053..627165 1 NC_017360.1 COG: COG1408; Pfam: PF00149; InterPro: IPR004843; integral membrane protein 627165 12349261 HMPREF4655_20647 Helicobacter pylori 35A integral membrane protein YP_005769767.1 626053 D 585535 CDS YP_005769768.1 384895779 12349262 627498..628187 1 NC_017360.1 COG: COG0745; Pfam: PF00072, PF00486; InterPro: IPR001789; DNA-binding response regulator 628187 12349262 HMPREF4655_20648 Helicobacter pylori 35A DNA-binding response regulator YP_005769768.1 627498 D 585535 CDS YP_005769769.1 384895780 12349263 628232..628441 1 NC_017360.1 pyrazinamidase/nicotinamidase 628441 12349263 HMPREF4655_20649 Helicobacter pylori 35A pyrazinamidase/nicotinamidase YP_005769769.1 628232 D 585535 CDS YP_005769770.1 384895781 12349264 complement(628683..629729) 1 NC_017360.1 COG: COG2404; Pfam: PF01368, PF02272; hypothetical protein 629729 12349264 HMPREF4655_20650 Helicobacter pylori 35A hypothetical protein YP_005769770.1 628683 R 585535 CDS YP_005769771.1 384895782 12349265 complement(629757..631958) 1 NC_017360.1 COG: COG1298; Pfam: PF00771; InterPro: IPR006301; flagellar biosynthesis protein FlhA 631958 flhA 12349265 flhA Helicobacter pylori 35A flagellar biosynthesis protein FlhA YP_005769771.1 629757 R 585535 CDS YP_005769772.1 384895783 12349266 632097..632369 1 NC_017360.1 COG: COG0184; Pfam: PF00312; InterPro: IPR009068; 30S ribosomal protein S15 632369 rpsO 12349266 rpsO Helicobacter pylori 35A 30S ribosomal protein S15 YP_005769772.1 632097 D 585535 CDS YP_005769773.1 384895784 12349267 632400..633689 1 NC_017360.1 Pfam: PF04932; InterPro: IPR007016; hypothetical protein 633689 12349267 HMPREF4655_20653 Helicobacter pylori 35A hypothetical protein YP_005769773.1 632400 D 585535 CDS YP_005769774.1 384895785 12349268 633819..634322 1 NC_017360.1 COG: COG0757; Pfam: PF01220; InterPro: IPR001874; 3-dehydroquinate dehydratase 634322 aroQ 12349268 aroQ Helicobacter pylori 35A 3-dehydroquinate dehydratase YP_005769774.1 633819 D 585535 CDS YP_005769775.1 384895786 12349269 634336..635409 1 NC_017360.1 COG: COG0006; Pfam: PF00557; InterPro: IPR000994; proline peptidase 635409 12349269 HMPREF4655_20655 Helicobacter pylori 35A proline peptidase YP_005769775.1 634336 D 585535 CDS YP_005769776.1 384895787 12349270 635409..635897 1 NC_017360.1 COG: COG0801; Pfam: PF01288; InterPro: IPR000550; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 635897 folK 12349270 folK Helicobacter pylori 35A 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase YP_005769776.1 635409 D 585535 CDS YP_005769777.1 384895788 12349271 635894..637270 1 NC_017360.1 COG: COG1419; Pfam: PF02881, PF00448; InterPro: IPR000897; flagellar biosynthesis regulator FlhF 637270 flhF 12349271 flhF Helicobacter pylori 35A flagellar biosynthesis regulator FlhF YP_005769777.1 635894 D 585535 CDS YP_005769778.1 384895789 12349272 637267..638151 1 NC_017360.1 COG: COG0455; Pfam: PF01656; InterPro: IPR002586; ParA family ATPase 638151 ylxH 12349272 ylxH Helicobacter pylori 35A ParA family ATPase YP_005769778.1 637267 D 585535 CDS YP_005769779.1 384895790 12349273 638158..638472 1 NC_017360.1 hypothetical protein 638472 12349273 HMPREF4655_20659 Helicobacter pylori 35A hypothetical protein YP_005769779.1 638158 D 585535 CDS YP_005769780.1 384895791 12349274 638450..639226 1 NC_017360.1 COG: COG1191; Pfam: PF04542, PF04545; InterPro: IPR014284; DNA-directed RNA polymerase sigma subunit FliA 639226 fliA 12349274 fliA Helicobacter pylori 35A DNA-directed RNA polymerase sigma subunit FliA YP_005769780.1 638450 D 585535 CDS YP_005769781.1 384895792 12349275 639219..640283 1 NC_017360.1 COG: COG1868; Pfam: PF02154, PF01052; InterPro: IPR001689; flagellar motor switch protein FliM 640283 fliM 12349275 fliM Helicobacter pylori 35A flagellar motor switch protein FliM YP_005769781.1 639219 D 585535 CDS YP_005769782.1 384895793 12349276 640287..641150 1 NC_017360.1 Pfam: PF01052; InterPro: IPR012826; flagellar motor switch protein 641150 fliY 12349276 fliY Helicobacter pylori 35A flagellar motor switch protein YP_005769782.1 640287 D 585535 CDS YP_005769783.1 384895794 12349277 641179..641715 1 NC_017360.1 COG: COG2731; Pfam: PF04074; InterPro: IPR004375; hypothetical protein 641715 12349277 HMPREF4655_20663 Helicobacter pylori 35A hypothetical protein YP_005769783.1 641179 D 585535 CDS YP_005769784.1 384895795 12349278 641712..642209 1 NC_017360.1 COG: COG4731; hypothetical protein 642209 12349278 HMPREF4655_20664 Helicobacter pylori 35A hypothetical protein YP_005769784.1 641712 D 585535 CDS YP_005769785.1 384895796 12349279 complement(642229..642681) 1 NC_017360.1 COG: COG0735; Pfam: PF01475; InterPro: IPR002481; ferric uptake regulation protein 642681 fur 12349279 fur Helicobacter pylori 35A ferric uptake regulation protein YP_005769785.1 642229 R 585535 CDS YP_005769786.1 384895797 12349280 complement(642841..644016) 1 NC_017360.1 COG: COG2256; Pfam: PF00004; InterPro: IPR003593; crossover junction endodeoxyribonuclease ATPase 644016 12349280 HMPREF4655_20666 Helicobacter pylori 35A crossover junction endodeoxyribonuclease ATPase YP_005769786.1 642841 R 585535 CDS YP_005769787.1 384895798 12349281 complement(644013..644384) 1 NC_017360.1 COG: COG0789; Pfam: PF00376; InterPro: IPR000551; transcriptional activator of heat-shock protein 644384 hspR 12349281 hspR Helicobacter pylori 35A transcriptional activator of heat-shock protein YP_005769787.1 644013 R 585535 CDS YP_005769788.1 384895799 12349282 complement(644394..645260) 1 NC_017360.1 COG: COG2214; Pfam: PF00226, PF01556; InterPro: IPR015609; chaperone DnaJ 645260 dnaJ 12349282 dnaJ Helicobacter pylori 35A chaperone DnaJ YP_005769788.1 644394 R 585535 CDS YP_005769789.1 384895800 12349283 645428..646678 1 NC_017360.1 hypothetical protein 646678 12349283 HMPREF4655_20669 Helicobacter pylori 35A hypothetical protein YP_005769789.1 645428 D 585535 CDS YP_005769790.1 384895801 12349284 complement(646700..647476) 1 NC_017360.1 COG: COG0258; hypothetical protein 647476 12349284 HMPREF4655_20670 Helicobacter pylori 35A hypothetical protein YP_005769790.1 646700 R 585535 CDS YP_005769791.1 384895802 12349285 complement(647797..648693) 1 NC_017360.1 Pfam: PF00072, PF02954; InterPro: IPR001789; response regulator 648693 12349285 HMPREF4655_20671 Helicobacter pylori 35A response regulator YP_005769791.1 647797 R 585535 CDS YP_005769792.1 384895803 12349286 complement(648710..649930) 1 NC_017360.1 Pfam: PF01128, PF02542; InterPro: IPR001228; 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase 649930 ispDF 12349286 ispDF Helicobacter pylori 35A 2-C-methyl-D-erythritol 2,4-cyclo diphosphate synthase YP_005769792.1 648710 R 585535 CDS YP_005769793.1 384895804 12349287 complement(649952..651382) 1 NC_017360.1 COG: COG0265; Pfam: PF00089, PF00595; InterPro: IPR011782; serine protease HtrA 651382 htrA 12349287 htrA Helicobacter pylori 35A serine protease HtrA YP_005769793.1 649952 R 585535 CDS YP_005769794.1 384895805 12349288 complement(651427..652869) 1 NC_017360.1 COG: COG0833; Pfam: PF00324; InterPro: IPR002293; APC family lysine-specific permease 652869 lysP2 12349288 lysP2 Helicobacter pylori 35A APC family lysine-specific permease YP_005769794.1 651427 R 585535 CDS YP_005769795.1 384895806 12349289 complement(653059..653598) 1 NC_017360.1 COG: COG0558; Pfam: PF01066; InterPro: IPR004570; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 653598 pgsA 12349289 pgsA Helicobacter pylori 35A CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005769795.1 653059 R 585535 CDS YP_005769796.1 384895807 12349290 complement(653595..654203) 1 NC_017360.1 hypothetical protein 654203 12349290 HMPREF4655_20676 Helicobacter pylori 35A hypothetical protein YP_005769796.1 653595 R 585535 CDS YP_005769797.1 384895808 12349291 complement(654213..655001) 1 NC_017360.1 COG: COG1028; Pfam: PF00106; InterPro: IPR002198; short chain dehydrogenase/reductase family oxidoreductase 655001 hdhA 12349291 hdhA Helicobacter pylori 35A short chain dehydrogenase/reductase family oxidoreductase YP_005769797.1 654213 R 585535 CDS YP_005769798.1 384895809 12349292 complement(654998..655900) 1 NC_017360.1 COG: COG0329; Pfam: PF00701; InterPro: IPR002220; dihydrodipicolinate synthase 655900 dapA 12349292 dapA Helicobacter pylori 35A dihydrodipicolinate synthase YP_005769798.1 654998 R 585535 CDS YP_005769799.1 384895810 12349293 complement(655915..657249) 1 NC_017360.1 COG: COG0612; Pfam: PF00675, PF05193; InterPro: IPR011237; coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E) 657249 pqqE 12349293 pqqE Helicobacter pylori 35A coenzyme PQQ synthesis protein E (pyrroloquinoline quinone biosynthesis protein E) YP_005769799.1 655915 R 585535 CDS YP_005769800.1 384895811 12349294 complement(657246..658301) 1 NC_017360.1 COG: COG0167; Pfam: PF01180; InterPro: IPR005719; dihydroorotate oxidase 658301 pyrD 12349294 pyrD Helicobacter pylori 35A dihydroorotate oxidase YP_005769800.1 657246 R 585535 CDS YP_005769801.1 384895812 12349295 complement(658338..660365) 1 NC_017360.1 COG: COG0855; Pfam: PF02503; InterPro: IPR003414; polyphosphate kinase 660365 ppk 12349295 ppk Helicobacter pylori 35A polyphosphate kinase YP_005769801.1 658338 R 585535 CDS YP_005769802.1 384895813 12349297 complement(661025..662131) 1 NC_017360.1 COG: COG0732; Pfam: PF01420; type I restriction-modification enzyme, S subunit 662131 hsdS 12349297 hsdS Helicobacter pylori 35A type I restriction-modification enzyme, S subunit YP_005769802.1 661025 R 585535 CDS YP_005769803.1 384895814 12349298 complement(662124..663755) 1 NC_017360.1 Pfam: PF02384; InterPro: IPR003356; type I restriction enzyme M protein 663755 hsdM 12349298 hsdM Helicobacter pylori 35A type I restriction enzyme M protein YP_005769803.1 662124 R 585535 CDS YP_005769804.1 384895815 12349299 complement(663745..666012) 1 NC_017360.1 COG: COG0610; Pfam: PF04851; InterPro: IPR006935; type I restriction enzyme R protein 666012 hsdR2 12349299 hsdR2 Helicobacter pylori 35A type I restriction enzyme R protein YP_005769804.1 663745 R 585535 CDS YP_005769805.1 384895816 12349300 complement(666186..666872) 1 NC_017360.1 Pfam: PF04313; InterPro: IPR007409; type I restriction enzyme R protein 666872 hsdR3 12349300 hsdR3 Helicobacter pylori 35A type I restriction enzyme R protein YP_005769805.1 666186 R 585535 CDS YP_005769806.1 384895817 12349301 complement(666920..668815) 1 NC_017360.1 COG: COG2604; Pfam: PF01973; InterPro: IPR002826; hypothetical protein 668815 12349301 HMPREF4655_20686 Helicobacter pylori 35A hypothetical protein YP_005769806.1 666920 R 585535 CDS YP_005769807.1 384895818 12349302 complement(668841..669608) 1 NC_017360.1 hypothetical protein 669608 12349302 HMPREF4655_20687 Helicobacter pylori 35A hypothetical protein YP_005769807.1 668841 R 585535 CDS YP_005769808.1 384895819 12349303 complement(669618..669965) 1 NC_017360.1 hypothetical protein 669965 12349303 HMPREF4655_20688 Helicobacter pylori 35A hypothetical protein YP_005769808.1 669618 R 585535 CDS YP_005769809.1 384895820 12349304 complement(669934..671421) 1 NC_017360.1 hypothetical protein 671421 12349304 HMPREF4655_20689 Helicobacter pylori 35A hypothetical protein YP_005769809.1 669934 R 585535 CDS YP_005769810.1 384895821 12349305 complement(671433..671921) 1 NC_017360.1 hypothetical protein 671921 12349305 HMPREF4655_20690 Helicobacter pylori 35A hypothetical protein YP_005769810.1 671433 R 585535 CDS YP_005769811.1 384895822 12349306 complement(671906..673642) 1 NC_017360.1 COG: COG1164; Pfam: PF08439, PF01432; InterPro: IPR011977; oligoendopeptidase F 673642 pepF 12349306 pepF Helicobacter pylori 35A oligoendopeptidase F YP_005769811.1 671906 R 585535 CDS YP_005769812.1 384895823 12349307 complement(673739..674989) 1 NC_017360.1 COG: COG0475; Pfam: PF00999; InterPro: IPR006153; glutathione-regulated potassium-efflux system protein 674989 kefB 12349307 kefB Helicobacter pylori 35A glutathione-regulated potassium-efflux system protein YP_005769812.1 673739 R 585535 CDS YP_005769813.1 384895824 12349308 complement(675308..675868) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 675868 12349308 HMPREF4655_20693 Helicobacter pylori 35A outer membrane protein YP_005769813.1 675308 R 585535 CDS YP_005769814.1 384895825 12349309 complement(675912..676046) 1 NC_017360.1 orotate phosphoribosyltransferase 676046 pyrE 12349309 pyrE Helicobacter pylori 35A orotate phosphoribosyltransferase YP_005769814.1 675912 R 585535 CDS YP_005769815.1 384895826 12349312 677428..678225 1 NC_017360.1 COG: COG1118; Pfam: PF00005; InterPro: IPR003439; molybdenum ABC superfamily ATP binding cassette transporter 678225 modD 12349312 modD Helicobacter pylori 35A molybdenum ABC superfamily ATP binding cassette transporter YP_005769815.1 677428 D 585535 CDS YP_005769816.1 384895827 12349313 complement(678310..679701) 1 NC_017360.1 COG: COG0008; Pfam: PF00749; InterPro: IPR004527; glutamate--tRNA ligase 679701 gltX1 12349313 gltX1 Helicobacter pylori 35A glutamate--tRNA ligase YP_005769816.1 678310 R 585535 CDS YP_005769817.1 384895828 12349314 679819..680919 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 680919 12349314 HMPREF4655_20701 Helicobacter pylori 35A outer membrane protein YP_005769817.1 679819 D 585535 CDS YP_005769818.1 384895829 12349315 680928..682565 1 NC_017360.1 COG: COG0827; adenine specific DNA methyltransferase 682565 vspIM 12349315 vspIM Helicobacter pylori 35A adenine specific DNA methyltransferase YP_005769818.1 680928 D 585535 CDS YP_005769819.1 384895830 12349316 682531..683379 1 NC_017360.1 COG: COG0859; DD-heptosyltransferase 683379 12349316 HMPREF4655_20703 Helicobacter pylori 35A DD-heptosyltransferase YP_005769819.1 682531 D 585535 CDS YP_005769820.1 384895831 12349317 683425..685224 1 NC_017360.1 COG: COG1217; Pfam: PF00009, PF03144, PF00679; InterPro: IPR006298; GTP-binding protein TypA/BipA 685224 typA 12349317 typA Helicobacter pylori 35A GTP-binding protein TypA/BipA YP_005769820.1 683425 D 585535 CDS YP_005769821.1 384895832 12349319 686174..686797 1 NC_017360.1 type II restriction endonuclease 686797 12349319 HMPREF4655_20707 Helicobacter pylori 35A type II restriction endonuclease YP_005769821.1 686174 D 585535 CDS YP_005769822.1 384895833 12349320 686893..687948 1 NC_017360.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase 687948 hphIAM 12349320 hphIAM Helicobacter pylori 35A DNA (cytosine-5-)-methyltransferase YP_005769822.1 686893 D 585535 CDS YP_005769823.1 384895834 12349322 complement(688931..689875) 1 NC_017360.1 COG: COG0753; InterPro: IPR011614; catalase like protein 689875 12349322 HMPREF4655_20711 Helicobacter pylori 35A catalase like protein YP_005769823.1 688931 R 585535 CDS YP_005769824.1 384895835 12349323 690156..691742 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 691742 hofC 12349323 hofC Helicobacter pylori 35A hof-family outer membrane protein YP_005769824.1 690156 D 585535 CDS YP_005769825.1 384895836 12349324 691814..693211 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 693211 hofD 12349324 hofD Helicobacter pylori 35A hof-family outer membrane protein YP_005769825.1 691814 D 585535 CDS YP_005769826.1 384895837 12349325 693616..694017 1 NC_017360.1 hypothetical protein 694017 12349325 HMPREF4655_20714 Helicobacter pylori 35A hypothetical protein YP_005769826.1 693616 D 585535 CDS YP_005769827.1 384895838 12349326 694117..695538 1 NC_017360.1 hypothetical protein 695538 12349326 HMPREF4655_20715 Helicobacter pylori 35A hypothetical protein YP_005769827.1 694117 D 585535 CDS YP_005769828.1 384895839 12349327 695510..695875 1 NC_017360.1 hypothetical protein 695875 12349327 HMPREF4655_20716 Helicobacter pylori 35A hypothetical protein YP_005769828.1 695510 D 585535 CDS YP_005769829.1 384895840 12349328 complement(696287..697012) 1 NC_017360.1 COG: COG1432; hypothetical protein 697012 12349328 HMPREF4655_20717 Helicobacter pylori 35A hypothetical protein YP_005769829.1 696287 R 585535 CDS YP_005769830.1 384895841 12349329 697144..697626 1 NC_017360.1 COG: COG0817; Pfam: PF02075; InterPro: IPR002176; crossover junction endoribonuclease subunit C 697626 ruvC 12349329 ruvC Helicobacter pylori 35A crossover junction endoribonuclease subunit C YP_005769830.1 697144 D 585535 CDS YP_005769831.1 384895842 12349330 complement(697638..700043) 1 NC_017360.1 COG: COG1629; Pfam: PF07715, PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 700043 frpB2 12349330 frpB2 Helicobacter pylori 35A iron-regulated outer membrane protein YP_005769831.1 697638 R 585535 CDS YP_005769832.1 384895843 12349331 700288..701850 1 NC_017360.1 COG: COG0753; Pfam: PF00199; InterPro: IPR011614; catalase 701850 katA 12349331 katA Helicobacter pylori 35A catalase YP_005769832.1 700288 D 585535 CDS YP_005769833.1 384895844 12349332 702001..702876 1 NC_017360.1 KapA protein 702876 kapA 12349332 kapA Helicobacter pylori 35A KapA protein YP_005769833.1 702001 D 585535 CDS YP_005769834.1 384895845 12349333 702961..703176 1 NC_017360.1 hypothetical protein 703176 12349333 HMPREF4655_20722 Helicobacter pylori 35A hypothetical protein YP_005769834.1 702961 D 585535 CDS YP_005769835.1 384895846 12349334 complement(703215..703544) 1 NC_017360.1 COG: COG2824; Pfam: PF08274, PF03831; InterPro: IPR004624; alkylphosphonate uptake protein 703544 phnA 12349334 phnA Helicobacter pylori 35A alkylphosphonate uptake protein YP_005769835.1 703215 R 585535 CDS YP_005769836.1 384895847 12349335 703642..703839 1 NC_017360.1 sugar fermentation stimulation protein-like protein 703839 12349335 HMPREF4655_20724 Helicobacter pylori 35A sugar fermentation stimulation protein-like protein YP_005769836.1 703642 D 585535 CDS YP_005769837.1 384895848 12349336 703836..704570 1 NC_017360.1 COG: COG2134; Pfam: PF02611; InterPro: IPR003763; CDP-diacylglycerol diphosphatase 704570 cdh 12349336 cdh Helicobacter pylori 35A CDP-diacylglycerol diphosphatase YP_005769837.1 703836 D 585535 CDS YP_005769838.1 384895849 12349337 704772..706928 1 NC_017360.1 COG: COG1749; Pfam: PF00460, PF07196, PF07559, PF06429; InterPro: IPR012835; flagellar hook protein FlgE 706928 flgE 12349337 flgE Helicobacter pylori 35A flagellar hook protein FlgE YP_005769838.1 704772 D 585535 CDS YP_005769839.1 384895850 12349338 706987..707340 1 NC_017360.1 COG: COG0375; Pfam: PF01155; InterPro: IPR000688; hydrogenase nickel incorporation protein HypA 707340 hypA 12349338 hypA Helicobacter pylori 35A hydrogenase nickel incorporation protein HypA YP_005769839.1 706987 D 585535 CDS YP_005769840.1 384895851 12349339 707347..707808 1 NC_017360.1 hypothetical protein 707808 12349339 HMPREF4655_20728 Helicobacter pylori 35A hypothetical protein YP_005769840.1 707347 D 585535 CDS YP_005769841.1 384895852 12349340 707808..708890 1 NC_017360.1 COG: COG0763; Pfam: PF02684; InterPro: IPR003835; lipid-A-disaccharide synthase 708890 lpxB 12349340 lpxB Helicobacter pylori 35A lipid-A-disaccharide synthase YP_005769841.1 707808 D 585535 CDS YP_005769842.1 384895853 12349341 708931..709425 1 NC_017360.1 COG: COG0782; Pfam: PF03449, PF01272; InterPro: IPR001437; transcription elongation factor GreA 709425 greA 12349341 greA Helicobacter pylori 35A transcription elongation factor GreA YP_005769842.1 708931 D 585535 CDS YP_005769843.1 384895854 12349342 709415..709852 1 NC_017360.1 COG: COG0756; Pfam: PF00692; InterPro: IPR008181; dUTP diphosphatase 709852 dut 12349342 dut Helicobacter pylori 35A dUTP diphosphatase YP_005769843.1 709415 D 585535 CDS YP_005769844.1 384895855 12349343 709849..710505 1 NC_017360.1 hypothetical protein 710505 12349343 HMPREF4655_20732 Helicobacter pylori 35A hypothetical protein YP_005769844.1 709849 D 585535 CDS YP_005769845.1 384895856 12349344 710510..712147 1 NC_017360.1 plasminogen-binding protein PgbB 712147 12349344 HMPREF4655_20733 Helicobacter pylori 35A plasminogen-binding protein PgbB YP_005769845.1 710510 D 585535 CDS YP_005769846.1 384895857 12349345 712152..712823 1 NC_017360.1 COG: COG1521; Pfam: PF03309; InterPro: IPR004619; pantothenate kinase 712823 coaX 12349345 coaX Helicobacter pylori 35A pantothenate kinase YP_005769846.1 712152 D 585535 CDS YP_005769847.1 384895858 12349346 712814..713551 1 NC_017360.1 COG: COG2836; hypothetical protein 713551 12349346 HMPREF4655_20735 Helicobacter pylori 35A hypothetical protein YP_005769847.1 712814 D 585535 CDS YP_005769848.1 384895859 12349347 713538..714062 1 NC_017360.1 COG: COG0241; InterPro: IPR004446; D,D-heptose 1,7-bisphosphate phosphatase 714062 12349347 HMPREF4655_20736 Helicobacter pylori 35A D,D-heptose 1,7-bisphosphate phosphatase YP_005769848.1 713538 D 585535 CDS YP_005769849.1 384895860 12349348 714071..715063 1 NC_017360.1 COG: COG0451; Pfam: PF01370; InterPro: IPR011912; ADP-glyceromanno-heptose 6-epimerase 715063 hldD 12349348 hldD Helicobacter pylori 35A ADP-glyceromanno-heptose 6-epimerase YP_005769849.1 714071 D 585535 CDS YP_005769850.1 384895861 12349349 715060..716445 1 NC_017360.1 COG: COG2870; Pfam: PF00294, PF01467; InterPro: IPR011913; bifunctional protein hldE (D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferase) 716445 hldE 12349349 hldE Helicobacter pylori 35A bifunctional protein hldE (D-beta-D-heptose 7-phosphate kinase/D-beta-D-heptose 1-phosphate adenosyltransferase) YP_005769850.1 715060 D 585535 CDS YP_005769851.1 384895862 12349350 716438..717016 1 NC_017360.1 COG: COG0279; Pfam: PF01380; InterPro: IPR004515; phosphoheptose isomerase 717016 gmhA 12349350 gmhA Helicobacter pylori 35A phosphoheptose isomerase YP_005769851.1 716438 D 585535 CDS YP_005769852.1 384895863 12349351 716988..717185 1 NC_017360.1 hypothetical protein 717185 12349351 HMPREF4655_20740 Helicobacter pylori 35A hypothetical protein YP_005769852.1 716988 D 585535 CDS YP_005769853.1 384895864 12349352 complement(717182..718183) 1 NC_017360.1 COG: COG0516; Pfam: PF00478; InterPro: IPR001093; GMP reductase 718183 guaC 12349352 guaC Helicobacter pylori 35A GMP reductase YP_005769853.1 717182 R 585535 CDS YP_005769854.1 384895865 12349353 718408..720009 1 NC_017360.1 COG: COG0488; Pfam: PF00005; InterPro: IPR003439; ABC superfamily ATP binding cassette transporter, ABC protein 720009 12349353 HMPREF4655_20742 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769854.1 718408 D 585535 CDS YP_005769855.1 384895866 12349354 720006..720938 1 NC_017360.1 COG: COG2958; Pfam: PF04373; InterPro: IPR007468; hypothetical protein 720938 12349354 HMPREF4655_20743 Helicobacter pylori 35A hypothetical protein YP_005769855.1 720006 D 585535 CDS YP_005769856.1 384895867 12349355 complement(720955..721641) 1 NC_017360.1 COG: COG0671; Pfam: PF01569; InterPro: IPR016118; phosphatidic acid phosphatase 721641 12349355 HMPREF4655_20744 Helicobacter pylori 35A phosphatidic acid phosphatase YP_005769856.1 720955 R 585535 CDS YP_005769857.1 384895868 12349356 complement(721795..722748) 1 NC_017360.1 type II site-specific deoxyribonuclease 722748 haeIIIR 12349356 haeIIIR Helicobacter pylori 35A type II site-specific deoxyribonuclease YP_005769857.1 721795 R 585535 CDS YP_005769858.1 384895869 12349357 complement(722745..723728) 1 NC_017360.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; DNA (cytosine-5-)-methyltransferase 723728 ngoPIIM 12349357 ngoPIIM Helicobacter pylori 35A DNA (cytosine-5-)-methyltransferase YP_005769858.1 722745 R 585535 CDS YP_005769859.1 384895870 12349358 723913..725502 1 NC_017360.1 COG: COG0286; Pfam: PF02384; InterPro: IPR004546; site-specific DNA-methyltransferase (adenine-specific) 725502 hsdM2 12349358 hsdM2 Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005769859.1 723913 D 585535 CDS YP_005769860.1 384895871 12349359 725495..726784 1 NC_017360.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I site-specific deoxyribonuclease 726784 12349359 HMPREF4655_20748 Helicobacter pylori 35A type I site-specific deoxyribonuclease YP_005769860.1 725495 D 585535 CDS YP_005769861.1 384895872 12349360 complement(726799..726960) 1 NC_017360.1 hypothetical protein 726960 12349360 HMPREF4655_20749 Helicobacter pylori 35A hypothetical protein YP_005769861.1 726799 R 585535 CDS YP_005769862.1 384895873 12349361 726959..729976 1 NC_017360.1 COG: COG0610; Pfam: PF04313, PF04851; InterPro: IPR004473; type I site-specific deoxyribonuclease 729976 12349361 HMPREF4655_20750 Helicobacter pylori 35A type I site-specific deoxyribonuclease YP_005769862.1 726959 D 585535 CDS YP_005769863.1 384895874 12349362 730069..730848 1 NC_017360.1 COG: COG2145; Pfam: PF02110; InterPro: IPR000417; hydroxyethylthiazole kinase 730848 thiM 12349362 thiM Helicobacter pylori 35A hydroxyethylthiazole kinase YP_005769863.1 730069 D 585535 CDS YP_005769864.1 384895875 12349363 730845..731654 1 NC_017360.1 COG: COG0351; Pfam: PF08543; InterPro: IPR004399; phosphomethylpyrimidine kinase 731654 thiD 12349363 thiD Helicobacter pylori 35A phosphomethylpyrimidine kinase YP_005769864.1 730845 D 585535 CDS YP_005769865.1 384895876 12349364 731647..732306 1 NC_017360.1 COG: COG0352; Pfam: PF02581; InterPro: IPR003733; thiamine-phosphate diphosphorylase 732306 thiE 12349364 thiE Helicobacter pylori 35A thiamine-phosphate diphosphorylase YP_005769865.1 731647 D 585535 CDS YP_005769866.1 384895877 12349365 complement(732361..733098) 1 NC_017360.1 hypothetical protein 733098 12349365 HMPREF4655_20754 Helicobacter pylori 35A hypothetical protein YP_005769866.1 732361 R 585535 CDS YP_005769867.1 384895878 12349366 complement(733098..734375) 1 NC_017360.1 COG: COG0452; Pfam: PF02441, PF04127; InterPro: IPR005252; coenzyme A biosynthesis bifunctional protein CoaBC 734375 coaBC 12349366 coaBC Helicobacter pylori 35A coenzyme A biosynthesis bifunctional protein CoaBC YP_005769867.1 733098 R 585535 CDS YP_005769868.1 384895879 12349367 complement(734372..735355) 1 NC_017360.1 COG: COG1086; Pfam: PF02719; InterPro: IPR003869; UDP-glucose 4-epimerase 735355 capD 12349367 capD Helicobacter pylori 35A UDP-glucose 4-epimerase YP_005769868.1 734372 R 585535 CDS YP_005769869.1 384895880 12349368 complement(735370..737133) 1 NC_017360.1 COG: COG2067; Pfam: PF03349; InterPro: IPR005017; outer membrane protein P1 737133 ompP 12349368 ompP Helicobacter pylori 35A outer membrane protein P1 YP_005769869.1 735370 R 585535 CDS YP_005769870.1 384895881 12349369 complement(737130..737741) 1 NC_017360.1 hypothetical protein 737741 12349369 HMPREF4655_20758 Helicobacter pylori 35A hypothetical protein YP_005769870.1 737130 R 585535 CDS YP_005769871.1 384895882 12349370 complement(737760..738428) 1 NC_017360.1 COG: COG3018; Pfam: PF04164; InterPro: IPR007293; hypothetical protein 738428 12349370 HMPREF4655_20759 Helicobacter pylori 35A hypothetical protein YP_005769871.1 737760 R 585535 CDS YP_005769872.1 384895883 12349372 complement(739050..739334) 1 NC_017360.1 COG: COG0776; Pfam: PF00216; InterPro: IPR000119; DNA-binding protein HU 739334 hup 12349372 hup Helicobacter pylori 35A DNA-binding protein HU YP_005769872.1 739050 R 585535 CDS YP_005769873.1 384895884 12349373 complement(739477..740862) 1 NC_017360.1 COG: COG1160; Pfam: PF01926; InterPro: IPR005225; ribosome-associated GTPase EngA 740862 engA 12349373 engA Helicobacter pylori 35A ribosome-associated GTPase EngA YP_005769873.1 739477 R 585535 CDS YP_005769874.1 384895885 12349374 740939..741829 1 NC_017360.1 hypothetical protein 741829 12349374 HMPREF4655_20762 Helicobacter pylori 35A hypothetical protein YP_005769874.1 740939 D 585535 CDS YP_005769875.1 384895886 12349375 741918..742706 1 NC_017360.1 Pfam: PF01564; InterPro: IPR001045; spermidine synthase 742706 speE 12349375 speE Helicobacter pylori 35A spermidine synthase YP_005769875.1 741918 D 585535 CDS YP_005769876.1 384895887 12349376 742708..743298 1 NC_017360.1 COG: COG0237; Pfam: PF01121; InterPro: IPR001977; dephospho-CoA kinase 743298 coaE 12349376 coaE Helicobacter pylori 35A dephospho-CoA kinase YP_005769876.1 742708 D 585535 CDS YP_005769877.1 384895888 12349377 743357..744718 1 NC_017360.1 COG: COG0154; Pfam: PF01425; InterPro: IPR004412; glutamyl-tRNA(Gln) amidotransferase subunit A 744718 gatA 12349377 gatA Helicobacter pylori 35A glutamyl-tRNA(Gln) amidotransferase subunit A YP_005769877.1 743357 D 585535 CDS YP_005769878.1 384895889 12349378 744728..746173 1 NC_017360.1 COG: COG0516; Pfam: PF00478, PF00571; InterPro: IPR013785; IMP dehydrogenase 746173 guaB 12349378 guaB Helicobacter pylori 35A IMP dehydrogenase YP_005769878.1 744728 D 585535 CDS YP_005769879.1 384895890 12349379 746294..746974 1 NC_017360.1 COG: COG0356; Pfam: PF00119; InterPro: IPR000568; ATP synthase F0 subunit A 746974 atpB 12349379 atpB Helicobacter pylori 35A ATP synthase F0 subunit A YP_005769879.1 746294 D 585535 CDS YP_005769880.1 384895891 12349380 747287..747535 1 NC_017360.1 COG: COG0724; Pfam: PF00076; InterPro: IPR015465; peptidyl-prolyl cis-trans isomerase 747535 12349380 HMPREF4655_20768 Helicobacter pylori 35A peptidyl-prolyl cis-trans isomerase YP_005769880.1 747287 D 585535 CDS YP_005769881.1 384895892 12349381 complement(747732..748553) 1 NC_017360.1 COG: COG3306; Pfam: PF01755; InterPro: IPR002654; lipooligosaccharide 5G8 epitope biosynthesis-associated protein 748553 lex2B 12349381 lex2B Helicobacter pylori 35A lipooligosaccharide 5G8 epitope biosynthesis-associated protein YP_005769881.1 747732 R 585535 CDS YP_005769882.1 384895893 12349382 complement(748721..749656) 1 NC_017360.1 COG: COG0492; Pfam: PF07992, PF00070; InterPro: IPR005982; thioredoxin-disulfide reductase 749656 trxB 12349382 trxB Helicobacter pylori 35A thioredoxin-disulfide reductase YP_005769882.1 748721 R 585535 CDS YP_005769883.1 384895894 12349383 complement(749662..749982) 1 NC_017360.1 COG: COG0526; Pfam: PF00085; InterPro: IPR012335; thioredoxin 749982 trxA 12349383 trxA Helicobacter pylori 35A thioredoxin YP_005769883.1 749662 R 585535 CDS YP_005769884.1 384895895 12349384 complement(750071..750415) 1 NC_017360.1 COG: COG0792; Pfam: PF02021; InterPro: IPR003509; endonuclease 750415 12349384 HMPREF4655_20772 Helicobacter pylori 35A endonuclease YP_005769884.1 750071 R 585535 CDS YP_005769885.1 384895896 12349385 complement(750416..751681) 1 NC_017360.1 COG: COG0460; Pfam: PF03447, PF00742, PF01842; InterPro: IPR001342; homoserine dehydrogenase 751681 hom 12349385 hom Helicobacter pylori 35A homoserine dehydrogenase YP_005769885.1 750416 R 585535 CDS YP_005769886.1 384895897 12349386 complement(751692..753476) 1 NC_017360.1 COG: COG0322; Pfam: PF01541, PF02151, PF08459; InterPro: IPR004791; excision endonuclease subunit UvrC 753476 uvrC 12349386 uvrC Helicobacter pylori 35A excision endonuclease subunit UvrC YP_005769886.1 751692 R 585535 CDS YP_005769887.1 384895898 12349387 complement(753477..753938) 1 NC_017360.1 hypothetical protein 753938 12349387 HMPREF4655_20775 Helicobacter pylori 35A hypothetical protein YP_005769887.1 753477 R 585535 CDS YP_005769888.1 384895899 12349388 753930..754109 1 NC_017360.1 hypothetical protein 754109 12349388 HMPREF4655_20776 Helicobacter pylori 35A hypothetical protein YP_005769888.1 753930 D 585535 CDS YP_005769889.1 384895900 12349389 complement(754121..754762) 1 NC_017360.1 COG: COG1125; Pfam: PF00005; InterPro: IPR003593; glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, ABC protein 754762 proV 12349389 proV Helicobacter pylori 35A glycine betaine/L-proline ABC superfamily ATP binding cassette transporter, ABC protein YP_005769889.1 754121 R 585535 CDS YP_005769890.1 384895901 12349390 complement(754766..756322) 1 NC_017360.1 COG: COG1732; Pfam: PF00528, PF04069; InterPro: IPR007210; glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein 756322 proWX 12349390 proWX Helicobacter pylori 35A glycine betaine ABC superfamily ATP binding cassette transporter, membrane protein YP_005769890.1 754766 R 585535 CDS YP_005769891.1 384895902 12349391 complement(756386..756859) 1 NC_017360.1 hypothetical protein 756859 12349391 HMPREF4655_20779 Helicobacter pylori 35A hypothetical protein YP_005769891.1 756386 R 585535 CDS YP_005769892.1 384895903 12349392 complement(756863..757630) 1 NC_017360.1 COG: COG1360; Pfam: PF00691; InterPro: IPR006665; flagellar motor protein MotB 757630 motB 12349392 motB Helicobacter pylori 35A flagellar motor protein MotB YP_005769892.1 756863 R 585535 CDS YP_005769893.1 384895904 12349393 complement(757633..758376) 1 NC_017360.1 COG: COG1291; Pfam: PF01618; InterPro: IPR002898; flagellar motor protein MotA 758376 motA 12349393 motA Helicobacter pylori 35A flagellar motor protein MotA YP_005769893.1 757633 R 585535 CDS YP_005769894.1 384895905 12349394 complement(758422..759189) 1 NC_017360.1 COG: COG0476; Pfam: PF00899, PF05237; InterPro: IPR016040; ThiF family protein 759189 thiF 12349394 thiF Helicobacter pylori 35A ThiF family protein YP_005769894.1 758422 R 585535 CDS YP_005769895.1 384895906 12349395 complement(759190..759807) 1 NC_017360.1 COG: COG0491; Pfam: PF00753; InterPro: IPR001279; metallo-beta-lactamase 759807 12349395 HMPREF4655_20783 Helicobacter pylori 35A metallo-beta-lactamase YP_005769895.1 759190 R 585535 CDS YP_005769896.1 384895907 12349396 759940..760950 1 NC_017360.1 COG: COG1565; hypothetical protein 760950 12349396 HMPREF4655_20784 Helicobacter pylori 35A hypothetical protein YP_005769896.1 759940 D 585535 CDS YP_005769897.1 384895908 12349397 761012..761152 1 NC_017360.1 hypothetical protein 761152 12349397 HMPREF4655_20785 Helicobacter pylori 35A hypothetical protein YP_005769897.1 761012 D 585535 CDS YP_005769898.1 384895909 12349398 761384..761710 1 NC_017360.1 hypothetical protein 761710 12349398 HMPREF4655_20786 Helicobacter pylori 35A hypothetical protein YP_005769898.1 761384 D 585535 CDS YP_005769899.1 384895910 12349399 761689..762291 1 NC_017360.1 COG: COG0742; Pfam: PF03602; InterPro: IPR004398; RsmD family RNA methyltransferase 762291 12349399 HMPREF4655_20787 Helicobacter pylori 35A RsmD family RNA methyltransferase YP_005769899.1 761689 D 585535 CDS YP_005769900.1 384895911 12349400 762300..762851 1 NC_017360.1 COG: COG1580; Pfam: PF03748; InterPro: IPR005503; flagellar basal body-associated protein FliL 762851 fliL 12349400 fliL Helicobacter pylori 35A flagellar basal body-associated protein FliL YP_005769900.1 762300 D 585535 CDS YP_005769901.1 384895912 12349401 762858..763214 1 NC_017360.1 COG: COG0736; Pfam: PF01648; InterPro: IPR002582; holo-[acyl-carrier-protein] synthase 763214 acpS 12349401 acpS Helicobacter pylori 35A holo-[acyl-carrier-protein] synthase YP_005769901.1 762858 D 585535 CDS YP_005769902.1 384895913 12349403 complement(765777..766394) 1 NC_017360.1 COG: COG1451; Pfam: PF01863; InterPro: IPR002725; metalloprotease 766394 12349403 HMPREF4655_20792 Helicobacter pylori 35A metalloprotease YP_005769902.1 765777 R 585535 CDS YP_005769903.1 384895914 12349404 766473..767315 1 NC_017360.1 COG: COG3306; Pfam: PF01755; InterPro: IPR002654; lipooligosaccharide 5G8 epitope biosynthesis-associated protein 767315 lex2B2 12349404 lex2B2 Helicobacter pylori 35A lipooligosaccharide 5G8 epitope biosynthesis-associated protein YP_005769903.1 766473 D 585535 CDS YP_005769904.1 384895915 12349405 complement(767537..768205) 1 NC_017360.1 hypothetical protein 768205 12349405 HMPREF4655_20794 Helicobacter pylori 35A hypothetical protein YP_005769904.1 767537 R 585535 CDS YP_005769905.1 384895916 12349406 768177..768362 1 NC_017360.1 hypothetical protein 768362 12349406 HMPREF4655_20795 Helicobacter pylori 35A hypothetical protein YP_005769905.1 768177 D 585535 CDS YP_005769906.1 384895917 12349407 768580..769614 1 NC_017360.1 COG: COG0108; Pfam: PF00926; InterPro: IPR000422; 3,4-dihydroxy-2-butanone 4-phosphate synthase 769614 ribB 12349407 ribB Helicobacter pylori 35A 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_005769906.1 768580 D 585535 CDS YP_005769907.1 384895918 12349408 769702..770541 1 NC_017360.1 hypothetical protein 770541 12349408 HMPREF4655_20797 Helicobacter pylori 35A hypothetical protein YP_005769907.1 769702 D 585535 CDS YP_005769908.1 384895919 12349409 770660..771238 1 NC_017360.1 COG: COG0807; Pfam: PF00925; InterPro: IPR000926; GTP cyclohydrolase II 771238 ribA 12349409 ribA Helicobacter pylori 35A GTP cyclohydrolase II YP_005769908.1 770660 D 585535 CDS YP_005769909.1 384895920 12349410 771536..771973 1 NC_017360.1 COG: COG0314; Pfam: PF02391; InterPro: IPR003448; molybdenum cofactorbiosynthesis protein large subunit 771973 moaE 12349410 moaE Helicobacter pylori 35A molybdenum cofactorbiosynthesis protein large subunit YP_005769909.1 771536 D 585535 CDS YP_005769910.1 384895921 12349411 771986..772543 1 NC_017360.1 COG: COG0521; Pfam: PF00994; InterPro: IPR001453; 4a-hydroxytetrahydrobiopterin dehydratase 772543 pcd 12349411 pcd Helicobacter pylori 35A 4a-hydroxytetrahydrobiopterin dehydratase YP_005769910.1 771986 D 585535 CDS YP_005769911.1 384895922 12349412 772525..773001 1 NC_017360.1 COG: COG0315; Pfam: PF01967; InterPro: IPR002820; molybdenum cofactor biosynthesis protein C 773001 moaC 12349412 moaC Helicobacter pylori 35A molybdenum cofactor biosynthesis protein C YP_005769911.1 772525 D 585535 CDS YP_005769912.1 384895923 12349413 773120..773902 1 NC_017360.1 Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin 773902 12349413 HMPREF4655_20802 Helicobacter pylori 35A neuraminyllactose-binding hemagglutinin YP_005769912.1 773120 D 585535 CDS YP_005769913.1 384895924 12349414 773934..774770 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 774770 12349414 HMPREF4655_20803 Helicobacter pylori 35A outer membrane protein YP_005769913.1 773934 D 585535 CDS YP_005769914.1 384895925 12349415 774883..776238 1 NC_017360.1 COG: COG0544; Pfam: PF05697, PF00254, PF05698; InterPro: IPR005215; trigger factor 776238 tig 12349415 tig Helicobacter pylori 35A trigger factor YP_005769914.1 774883 D 585535 CDS YP_005769915.1 384895926 12349416 776261..776848 1 NC_017360.1 COG: COG0740; Pfam: PF00574; InterPro: IPR001907; ATP-dependent Clp protease proteolytic subunit 776848 clpP 12349416 clpP Helicobacter pylori 35A ATP-dependent Clp protease proteolytic subunit YP_005769915.1 776261 D 585535 CDS YP_005769916.1 384895927 12349417 776853..777380 1 NC_017360.1 COG: COG0242; Pfam: PF01327; InterPro: IPR000181; peptide deformylase 777380 def 12349417 def Helicobacter pylori 35A peptide deformylase YP_005769916.1 776853 D 585535 CDS YP_005769917.1 384895928 12349418 777383..778903 1 NC_017360.1 COG: COG0606; Pfam: PF01078; InterPro: IPR004482; Mg chelatase-like protein 778903 12349418 HMPREF4655_20807 Helicobacter pylori 35A Mg chelatase-like protein YP_005769917.1 777383 D 585535 CDS YP_005769918.1 384895929 12349419 778928..780988 1 NC_017360.1 COG: COG2217; Pfam: PF00122, PF00702; InterPro: IPR001757; P-ATPase superfamily P-type ATPase cadmium transporter 780988 cadA 12349419 cadA Helicobacter pylori 35A P-ATPase superfamily P-type ATPase cadmium transporter YP_005769918.1 778928 D 585535 CDS YP_005769919.1 384895930 12349420 781024..782313 1 NC_017360.1 COG: COG0732; Pfam: PF01420; InterPro: IPR000055; type I site-specific deoxyribonuclease 782313 12349420 HMPREF4655_20809 Helicobacter pylori 35A type I site-specific deoxyribonuclease YP_005769919.1 781024 D 585535 CDS YP_005769920.1 384895931 12349421 complement(782328..782489) 1 NC_017360.1 hypothetical protein 782489 12349421 HMPREF4655_20810 Helicobacter pylori 35A hypothetical protein YP_005769920.1 782328 R 585535 CDS YP_005769921.1 384895932 12349422 complement(782709..784208) 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 784208 hofF 12349422 hofF Helicobacter pylori 35A hof-family outer membrane protein YP_005769921.1 782709 R 585535 CDS YP_005769922.1 384895933 12349423 complement(784489..785781) 1 NC_017360.1 COG: COG4591; Pfam: PF02687; InterPro: IPR003838; ABC superfamily ATP binding cassette transporter, ABC protein 785781 12349423 HMPREF4655_20812 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769922.1 784489 R 585535 CDS YP_005769923.1 384895934 12349424 complement(785711..788308) 1 NC_017360.1 COG: COG0653; Pfam: PF07517, PF01043, PF00271, PF07516, PF02810; InterPro: IPR000185; preprotein translocase subunit SecA 788308 secA 12349424 secA Helicobacter pylori 35A preprotein translocase subunit SecA YP_005769923.1 785711 R 585535 CDS YP_005769924.1 384895935 12349425 788428..789009 1 NC_017360.1 COG: COG2834; Pfam: PF03548; InterPro: IPR004564; outer-membrane lipoprotein carrier protein 789009 lolA 12349425 lolA Helicobacter pylori 35A outer-membrane lipoprotein carrier protein YP_005769924.1 788428 D 585535 CDS YP_005769925.1 384895936 12349427 789503..790030 1 NC_017360.1 hypothetical protein 790030 12349427 HMPREF4655_20815 Helicobacter pylori 35A hypothetical protein YP_005769925.1 789503 D 585535 CDS YP_005769926.1 384895937 12349429 complement(791492..792781) 1 NC_017360.1 COG: COG5659; hypothetical protein 792781 12349429 HMPREF4655_20818 Helicobacter pylori 35A hypothetical protein YP_005769926.1 791492 R 585535 CDS YP_005769927.1 384895938 12349430 complement(793036..793305) 1 NC_017360.1 hypothetical protein 793305 12349430 HMPREF4655_20819 Helicobacter pylori 35A hypothetical protein YP_005769927.1 793036 R 585535 CDS YP_005769928.1 384895939 12349431 complement(793384..795945) 1 NC_017360.1 COG: COG1049; Pfam: PF06434, PF00330; InterPro: IPR004406; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 795945 acnB 12349431 acnB Helicobacter pylori 35A bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_005769928.1 793384 R 585535 CDS YP_005769929.1 384895940 12349432 796080..796763 1 NC_017360.1 COG: COG1427; Pfam: PF02621; InterPro: IPR003773; ACR protein 796763 12349432 HMPREF4655_20821 Helicobacter pylori 35A ACR protein YP_005769929.1 796080 D 585535 CDS YP_005769930.1 384895941 12349433 796871..797593 1 NC_017360.1 COG: COG0528; Pfam: PF00696; InterPro: IPR001048; UMP kinase 797593 pyrH 12349433 pyrH Helicobacter pylori 35A UMP kinase YP_005769930.1 796871 D 585535 CDS YP_005769931.1 384895942 12349434 797636..797860 1 NC_017360.1 COG: COG1758; Pfam: PF01192; InterPro: IPR006110; DNA-directed RNA polymerase subunit omega 797860 rpoZ 12349434 rpoZ Helicobacter pylori 35A DNA-directed RNA polymerase subunit omega YP_005769931.1 797636 D 585535 CDS YP_005769932.1 384895943 12349435 797847..800174 1 NC_017360.1 COG: COG0317; Pfam: PF01966, PF04607, PF02824; InterPro: IPR004811; penta-phosphate guanosine-3'-pyrophosphohydrolase 800174 spoT 12349435 spoT Helicobacter pylori 35A penta-phosphate guanosine-3'-pyrophosphohydrolase YP_005769932.1 797847 D 585535 CDS YP_005769933.1 384895944 12349436 800198..801406 1 NC_017360.1 COG: COG0162; Pfam: PF00579, PF01479; InterPro: IPR002307; tyrosine--tRNA ligase 801406 tyrS 12349436 tyrS Helicobacter pylori 35A tyrosine--tRNA ligase YP_005769933.1 800198 D 585535 CDS YP_005769934.1 384895945 12349437 801417..802508 1 NC_017360.1 COG: COG2070; Pfam: PF03060; InterPro: IPR004136; 2-nitropropane dioxygenase 802508 12349437 HMPREF4655_20826 Helicobacter pylori 35A 2-nitropropane dioxygenase YP_005769934.1 801417 D 585535 CDS YP_005769935.1 384895946 12349438 802515..803822 1 NC_017360.1 COG: COG0860; Pfam: PF01520; InterPro: IPR002508; N-acetylmuramoyl-L-alanine amidase 803822 amiD 12349438 amiD Helicobacter pylori 35A N-acetylmuramoyl-L-alanine amidase YP_005769935.1 802515 D 585535 CDS YP_005769936.1 384895947 12349439 803841..804578 1 NC_017360.1 hypothetical protein 804578 12349439 HMPREF4655_20828 Helicobacter pylori 35A hypothetical protein YP_005769936.1 803841 D 585535 CDS YP_005769937.1 384895948 12349441 805804..805926 1 NC_017360.1 ABC superfamily ATP binding cassette transporter/periplasmic Mn/Zn-binding protein 805926 adhS 12349441 adhS Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter/periplasmic Mn/Zn-binding protein YP_005769937.1 805804 D 585535 CDS YP_005769938.1 384895949 12349443 807673..808113 1 NC_017360.1 hypothetical protein 808113 12349443 HMPREF4655_20834 Helicobacter pylori 35A hypothetical protein YP_005769938.1 807673 D 585535 CDS YP_005769939.1 384895950 12349444 808233..809063 1 NC_017360.1 proteobacterial sortase system OmpA family protein 809063 pdsO 12349444 pdsO Helicobacter pylori 35A proteobacterial sortase system OmpA family protein YP_005769939.1 808233 D 585535 CDS YP_005769940.1 384895951 12349445 809082..809396 1 NC_017360.1 Pfam: PF03692; InterPro: IPR005358; hypothetical protein 809396 12349445 HMPREF4655_20836 Helicobacter pylori 35A hypothetical protein YP_005769940.1 809082 D 585535 CDS YP_005769941.1 384895952 12349446 complement(809405..810298) 1 NC_017360.1 COG: COG0552; Pfam: PF00448; InterPro: IPR004390; cell division protein FtsY 810298 ftsY 12349446 ftsY Helicobacter pylori 35A cell division protein FtsY YP_005769941.1 809405 R 585535 CDS YP_005769942.1 384895953 12349447 complement(810305..810862) 1 NC_017360.1 hypothetical protein 810862 12349447 HMPREF4655_20838 Helicobacter pylori 35A hypothetical protein YP_005769942.1 810305 R 585535 CDS YP_005769943.1 384895954 12349448 810987..811634 1 NC_017360.1 Pfam: PF01812; InterPro: IPR002698; hypothetical protein 811634 12349448 HMPREF4655_20839 Helicobacter pylori 35A hypothetical protein YP_005769943.1 810987 D 585535 CDS YP_005769944.1 384895955 12349449 811534..813123 1 NC_017360.1 COG: COG1418; Pfam: PF00013, PF01966; InterPro: IPR003607; 2',3'-cyclic-nucleotide 2'-phosphodiesterase 813123 ymdA 12349449 ymdA Helicobacter pylori 35A 2',3'-cyclic-nucleotide 2'-phosphodiesterase YP_005769944.1 811534 D 585535 CDS YP_005769945.1 384895956 12349450 complement(813124..814377) 1 NC_017360.1 COG: COG0534; Pfam: PF01554; InterPro: IPR002528; multidrug efflux protein 814377 12349450 HMPREF4655_20841 Helicobacter pylori 35A multidrug efflux protein YP_005769945.1 813124 R 585535 CDS YP_005769946.1 384895957 12349451 complement(814440..815753) 1 NC_017360.1 COG: COG2056; Pfam: PF03553; InterPro: IPR004770; Na+/H+ antiporter family protein 815753 12349451 HMPREF4655_20842 Helicobacter pylori 35A Na+/H+ antiporter family protein YP_005769946.1 814440 R 585535 CDS YP_005769947.1 384895958 12349452 complement(815880..816758) 1 NC_017360.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; N-carbamoylputrescine amidase 816758 cpa 12349452 cpa Helicobacter pylori 35A N-carbamoylputrescine amidase YP_005769947.1 815880 R 585535 CDS YP_005769948.1 384895959 12349453 complement(816762..816947) 1 NC_017360.1 hypothetical protein 816947 12349453 HMPREF4655_20844 Helicobacter pylori 35A hypothetical protein YP_005769948.1 816762 R 585535 CDS YP_005769949.1 384895960 12349454 complement(816937..817596) 1 NC_017360.1 COG: COG1179; Pfam: PF00899; InterPro: IPR016040; ThiF family protein 817596 moeB 12349454 moeB Helicobacter pylori 35A ThiF family protein YP_005769949.1 816937 R 585535 CDS YP_005769950.1 384895961 12349455 complement(817649..817888) 1 NC_017360.1 hypothetical protein 817888 12349455 HMPREF4655_20846 Helicobacter pylori 35A hypothetical protein YP_005769950.1 817649 R 585535 CDS YP_005769951.1 384895962 12349456 complement(817875..818255) 1 NC_017360.1 COG: COG1516; Pfam: PF02561; InterPro: IPR003713; flagellar protein FliS 818255 fliS 12349456 fliS Helicobacter pylori 35A flagellar protein FliS YP_005769951.1 817875 R 585535 CDS YP_005769952.1 384895963 12349457 complement(818303..820360) 1 NC_017360.1 COG: COG1345; Pfam: PF02465, PF07196, PF07195; InterPro: IPR010809; flagellar hook-associated protein 2 820360 fliD 12349457 fliD Helicobacter pylori 35A flagellar hook-associated protein 2 YP_005769952.1 818303 R 585535 CDS YP_005769953.1 384895964 12349458 complement(820377..820787) 1 NC_017360.1 COG: COG1334; Pfam: PF03646; InterPro: IPR005186; polar flagellin 820787 flaG 12349458 flaG Helicobacter pylori 35A polar flagellin YP_005769953.1 820377 R 585535 CDS YP_005769954.1 384895965 12349459 complement(820832..822034) 1 NC_017360.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; hypothetical protein 822034 12349459 HMPREF4655_20850 Helicobacter pylori 35A hypothetical protein YP_005769954.1 820832 R 585535 CDS YP_005769955.1 384895966 12349460 complement(822027..822845) 1 NC_017360.1 cell division protein FtsX 822845 ftsX 12349460 ftsX Helicobacter pylori 35A cell division protein FtsX YP_005769955.1 822027 R 585535 CDS YP_005769956.1 384895967 12349461 complement(822820..823491) 1 NC_017360.1 COG: COG1136; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 823491 lolD 12349461 lolD Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769956.1 822820 R 585535 CDS YP_005769957.1 384895968 12349462 complement(823491..824669) 1 NC_017360.1 COG: COG0220; Pfam: PF02390; InterPro: IPR003358; tRNA (guanine-N(7)-)-methyltransferase 824669 trmB 12349462 trmB Helicobacter pylori 35A tRNA (guanine-N(7)-)-methyltransferase YP_005769957.1 823491 R 585535 CDS YP_005769958.1 384895969 12349463 complement(824680..825927) 1 NC_017360.1 COG: COG3401; Pfam: PF00041; hypothetical protein 825927 12349463 HMPREF4655_20854 Helicobacter pylori 35A hypothetical protein YP_005769958.1 824680 R 585535 CDS YP_005769959.1 384895970 12349464 complement(825890..826873) 1 NC_017360.1 COG: COG0564; Pfam: PF01479, PF00849; InterPro: IPR006225; RluA family ribosomal large subunit pseudouridine synthase 826873 12349464 HMPREF4655_20855 Helicobacter pylori 35A RluA family ribosomal large subunit pseudouridine synthase YP_005769959.1 825890 R 585535 CDS YP_005769960.1 384895971 12349465 827038..827292 1 NC_017360.1 hypothetical protein 827292 12349465 HMPREF4655_20856 Helicobacter pylori 35A hypothetical protein YP_005769960.1 827038 D 585535 CDS YP_005769961.1 384895972 12349466 827289..828140 1 NC_017360.1 hypothetical protein 828140 12349466 HMPREF4655_20857 Helicobacter pylori 35A hypothetical protein YP_005769961.1 827289 D 585535 CDS YP_005769962.1 384895973 12349468 complement(829448..830404) 1 NC_017360.1 COG: COG0462; Pfam: PF00156; InterPro: IPR005946; phosphoribosyl pyrophosphate synthetase 830404 prs 12349468 prs Helicobacter pylori 35A phosphoribosyl pyrophosphate synthetase YP_005769962.1 829448 R 585535 CDS YP_005769963.1 384895974 12349469 complement(830469..830960) 1 NC_017360.1 COG: COG0537; Pfam: PF01230; InterPro: IPR011151; hit family protein 830960 12349469 HMPREF4655_20859 Helicobacter pylori 35A hit family protein YP_005769963.1 830469 R 585535 CDS YP_005769964.1 384895975 12349470 complement(830964..832445) 1 NC_017360.1 COG: COG0770; Pfam: PF08245; InterPro: IPR005863; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 832445 murF 12349470 murF Helicobacter pylori 35A UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_005769964.1 830964 R 585535 CDS YP_005769965.1 384895976 12349471 complement(832432..833157) 1 NC_017360.1 COG: COG0596; 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase 833157 12349471 HMPREF4655_20861 Helicobacter pylori 35A 2-hydroxy-6-oxohepta-2,4-dienoate hydrolase YP_005769965.1 832432 R 585535 CDS YP_005769966.1 384895977 12349472 complement(833157..834227) 1 NC_017360.1 COG: COG1181; Pfam: PF01820, PF07478; InterPro: IPR005905; D-alanine--D-alanine ligase 834227 ddl 12349472 ddl Helicobacter pylori 35A D-alanine--D-alanine ligase YP_005769966.1 833157 R 585535 CDS YP_005769967.1 384895978 12349473 complement(834278..834754) 1 NC_017360.1 COG: COG1267; Pfam: PF04608; InterPro: IPR007686; phosphatidylglycerophosphatase A 834754 pgpA 12349473 pgpA Helicobacter pylori 35A phosphatidylglycerophosphatase A YP_005769967.1 834278 R 585535 CDS YP_005769968.1 384895979 12349474 834858..836012 1 NC_017360.1 COG: COG0075; Pfam: PF00266; InterPro: IPR015421; phosphoserine transaminase 836012 serC 12349474 serC Helicobacter pylori 35A phosphoserine transaminase YP_005769968.1 834858 D 585535 CDS YP_005769969.1 384895980 12349475 836021..836482 1 NC_017360.1 COG: COG2236; Pfam: PF00156; xanthine guanine phosphoribosyl transferase 836482 gpt 12349475 gpt Helicobacter pylori 35A xanthine guanine phosphoribosyl transferase YP_005769969.1 836021 D 585535 CDS YP_005769970.1 384895981 12349476 836484..837803 1 NC_017360.1 COG: COG0621; Pfam: PF00919, PF04055; InterPro: IPR005840; 2-methylthioadenine synthetase 837803 12349476 HMPREF4655_20866 Helicobacter pylori 35A 2-methylthioadenine synthetase YP_005769970.1 836484 D 585535 CDS YP_005769971.1 384895982 12349477 complement(837781..837921) 1 NC_017360.1 hypothetical protein 837921 12349477 HMPREF4655_20867 Helicobacter pylori 35A hypothetical protein YP_005769971.1 837781 R 585535 CDS YP_005769972.1 384895983 12349481 840493..841347 1 NC_017360.1 labile enterotoxin output A 841347 12349481 HMPREF4655_20875 Helicobacter pylori 35A labile enterotoxin output A YP_005769972.1 840493 D 585535 CDS YP_005769973.1 384895984 12349482 841448..841756 1 NC_017360.1 hypothetical protein 841756 12349482 HMPREF4655_20876 Helicobacter pylori 35A hypothetical protein YP_005769973.1 841448 D 585535 CDS YP_005769974.1 384895985 12349483 841765..842832 1 NC_017360.1 ATP /GTP binding protein 842832 12349483 HMPREF4655_20877 Helicobacter pylori 35A ATP /GTP binding protein YP_005769974.1 841765 D 585535 CDS YP_005769975.1 384895986 12349484 842855..843886 1 NC_017360.1 COG: COG0037; Pfam: PF01171; InterPro: IPR012795; tRNA(Ile)-lysidine synthase 843886 12349484 HMPREF4655_20878 Helicobacter pylori 35A tRNA(Ile)-lysidine synthase YP_005769975.1 842855 D 585535 CDS YP_005769976.1 384895987 12349485 843980..844966 1 NC_017360.1 COG: COG0042; Pfam: PF01207; InterPro: IPR001269; tRNA-dihydrouridine synthase B 844966 dusB 12349485 dusB Helicobacter pylori 35A tRNA-dihydrouridine synthase B YP_005769976.1 843980 D 585535 CDS YP_005769977.1 384895988 12349486 844936..845853 1 NC_017360.1 Pfam: PF01856; outer membrane protein 845853 12349486 HMPREF4655_20880 Helicobacter pylori 35A outer membrane protein YP_005769977.1 844936 D 585535 CDS YP_005769978.1 384895989 12349487 846071..848020 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein SabA 848020 12349487 HMPREF4655_20881 Helicobacter pylori 35A outer membrane protein SabA YP_005769978.1 846071 D 585535 CDS YP_005769979.1 384895990 12349488 complement(848096..849427) 1 NC_017360.1 COG: COG2704; Pfam: PF03605; InterPro: IPR004668; anaerobic C4-dicarboxylate membrane transporter DcuA 849427 dcuA 12349488 dcuA Helicobacter pylori 35A anaerobic C4-dicarboxylate membrane transporter DcuA YP_005769979.1 848096 R 585535 CDS YP_005769980.1 384895991 12349489 849503..850555 1 NC_017360.1 COG: COG0252; Pfam: PF00710; InterPro: IPR004550; asparaginase 850555 ansB 12349489 ansB Helicobacter pylori 35A asparaginase YP_005769980.1 849503 D 585535 CDS YP_005769981.1 384895992 12349490 complement(850620..851045) 1 NC_017360.1 hypothetical protein 851045 12349490 HMPREF4655_20884 Helicobacter pylori 35A hypothetical protein YP_005769981.1 850620 R 585535 CDS YP_005769982.1 384895993 12349491 complement(851196..851666) 1 NC_017360.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 851666 12349491 HMPREF4655_20885 Helicobacter pylori 35A hypothetical protein YP_005769982.1 851196 R 585535 CDS YP_005769983.1 384895994 12349492 complement(851695..852117) 1 NC_017360.1 Pfam: PF06518; InterPro: IPR009488; hypothetical protein 852117 12349492 HMPREF4655_20886 Helicobacter pylori 35A hypothetical protein YP_005769983.1 851695 R 585535 CDS YP_005769984.1 384895995 12349493 852388..853020 1 NC_017360.1 COG: COG1279; Pfam: PF01810; InterPro: IPR001123; LysE family L-lysine exporter 853020 12349493 HMPREF4655_20887 Helicobacter pylori 35A LysE family L-lysine exporter YP_005769984.1 852388 D 585535 CDS YP_005769985.1 384895996 12349494 853089..854768 1 NC_017360.1 COG: COG2812; Pfam: PF00004; InterPro: IPR012763; DNA polymerase III subunit gamma/tau DnaX 854768 dnaX 12349494 dnaX Helicobacter pylori 35A DNA polymerase III subunit gamma/tau DnaX YP_005769985.1 853089 D 585535 CDS YP_005769986.1 384895997 12349495 854765..855166 1 NC_017360.1 COG: COG0802; Pfam: PF02367; InterPro: IPR003442; hypothetical protein 855166 12349495 HMPREF4655_20889 Helicobacter pylori 35A hypothetical protein YP_005769986.1 854765 D 585535 CDS YP_005769987.1 384895998 12349496 855179..855901 1 NC_017360.1 COG: COG1137; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 855901 12349496 HMPREF4655_20890 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005769987.1 855179 D 585535 CDS YP_005769988.1 384895999 12349497 855904..857148 1 NC_017360.1 COG: COG1508; Pfam: PF00309, PF04963, PF04552; InterPro: IPR000394; RNA polymerase factor sigma-54 857148 12349497 HMPREF4655_20891 Helicobacter pylori 35A RNA polymerase factor sigma-54 YP_005769988.1 855904 D 585535 CDS YP_005769989.1 384896000 12349498 complement(857226..857369) 1 NC_017360.1 hypothetical protein 857369 12349498 HMPREF4655_20892 Helicobacter pylori 35A hypothetical protein YP_005769989.1 857226 R 585535 CDS YP_005769990.1 384896001 12349499 857546..858460 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 858460 12349499 HMPREF4655_20893 Helicobacter pylori 35A outer membrane protein YP_005769990.1 857546 D 585535 CDS YP_005769991.1 384896002 12349500 complement(858568..859788) 1 NC_017360.1 COG: COG1896; hypothetical protein 859788 12349500 HMPREF4655_20894 Helicobacter pylori 35A hypothetical protein YP_005769991.1 858568 R 585535 CDS YP_005769992.1 384896003 12349501 complement(860265..861167) 1 NC_017360.1 COG: COG1912; Pfam: PF01887; InterPro: IPR002747; hypothetical protein DUF62 861167 12349501 HMPREF4655_20895 Helicobacter pylori 35A hypothetical protein DUF62 YP_005769992.1 860265 R 585535 CDS YP_005769993.1 384896004 12349502 complement(861412..861756) 1 NC_017360.1 hypothetical protein 861756 12349502 HMPREF4655_20896 Helicobacter pylori 35A hypothetical protein YP_005769993.1 861412 R 585535 CDS YP_005769994.1 384896005 12349503 complement(861776..862702) 1 NC_017360.1 COG: COG0275; Pfam: PF01795; InterPro: IPR002903; S-adenosyl-methyltransferase MraW 862702 mraW 12349503 mraW Helicobacter pylori 35A S-adenosyl-methyltransferase MraW YP_005769994.1 861776 R 585535 CDS YP_005769995.1 384896006 12349504 complement(862896..863717) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; HOP family outer membrane porin 863717 hopE 12349504 hopE Helicobacter pylori 35A HOP family outer membrane porin YP_005769995.1 862896 R 585535 CDS YP_005769996.1 384896007 12349505 863892..866717 1 NC_017360.1 COG: COG0178; Pfam: PF00005; InterPro: IPR004602; excision endonuclease subunit UvrA 866717 uvrA 12349505 uvrA Helicobacter pylori 35A excision endonuclease subunit UvrA YP_005769996.1 863892 D 585535 CDS YP_005769997.1 384896008 12349506 complement(867038..868183) 1 NC_017360.1 COG: COG2204; Pfam: PF00072, PF00158; InterPro: IPR002078; sigma-54 dependent DNA-binding response regulator 868183 fleR 12349506 fleR Helicobacter pylori 35A sigma-54 dependent DNA-binding response regulator YP_005769997.1 867038 R 585535 CDS YP_005769998.1 384896009 12349507 complement(868180..868653) 1 NC_017360.1 hypothetical protein 868653 12349507 HMPREF4655_20901 Helicobacter pylori 35A hypothetical protein YP_005769998.1 868180 R 585535 CDS YP_005769999.1 384896010 12349508 complement(868653..871139) 1 NC_017360.1 COG: COG0188; Pfam: PF00521, PF03989; InterPro: IPR005743; DNA topoisomerase subunit A 871139 gyrA 12349508 gyrA Helicobacter pylori 35A DNA topoisomerase subunit A YP_005769999.1 868653 R 585535 CDS YP_005770000.1 384896011 12349509 complement(871159..871545) 1 NC_017360.1 COG: COG0818; Pfam: PF01219; InterPro: IPR000829; diacylglycerol kinase 871545 dgkA 12349509 dgkA Helicobacter pylori 35A diacylglycerol kinase YP_005770000.1 871159 R 585535 CDS YP_005770001.1 384896012 12349510 complement(871538..872551) 1 NC_017360.1 hypothetical protein 872551 12349510 HMPREF4655_20904 Helicobacter pylori 35A hypothetical protein YP_005770001.1 871538 R 585535 CDS YP_005770002.1 384896013 12349511 complement(872874..873401) 1 NC_017360.1 COG: COG4647; Pfam: PF08882; InterPro: IPR014979; acetone carboxylase subunit gamma 873401 acxC 12349511 acxC Helicobacter pylori 35A acetone carboxylase subunit gamma YP_005770002.1 872874 R 585535 CDS YP_005770003.1 384896014 12349512 complement(873391..875688) 1 NC_017360.1 COG: COG0146; Pfam: PF02538; InterPro: IPR003692; N-methylhydantoinase 875688 12349512 HMPREF4655_20906 Helicobacter pylori 35A N-methylhydantoinase YP_005770003.1 873391 R 585535 CDS YP_005770004.1 384896015 12349513 complement(875700..877841) 1 NC_017360.1 COG: COG0145; Pfam: PF05378, PF01968; InterPro: IPR002821; hydantoin utilization protein A 877841 hyuA 12349513 hyuA Helicobacter pylori 35A hydantoin utilization protein A YP_005770004.1 875700 R 585535 CDS YP_005770005.1 384896016 12349514 complement(878048..879049) 1 NC_017360.1 COG: COG3528; outer membrane protein 879049 12349514 HMPREF4655_20908 Helicobacter pylori 35A outer membrane protein YP_005770005.1 878048 R 585535 CDS YP_005770006.1 384896017 12349515 complement(879174..880538) 1 NC_017360.1 COG: COG2031; Pfam: PF02667; InterPro: IPR006160; short-chain fatty acids transporter 880538 atoE 12349515 atoE Helicobacter pylori 35A short-chain fatty acids transporter YP_005770006.1 879174 R 585535 CDS YP_005770007.1 384896018 12349516 complement(880557..881180) 1 NC_017360.1 COG: COG2057; Pfam: PF01144; InterPro: IPR004165; 3-oxoacid CoA-transferase 881180 scoB 12349516 scoB Helicobacter pylori 35A 3-oxoacid CoA-transferase YP_005770007.1 880557 R 585535 CDS YP_005770008.1 384896019 12349517 complement(881177..881875) 1 NC_017360.1 COG: COG1788; Pfam: PF01144; InterPro: IPR012792; 3-oxoacid CoA-transferase 881875 scoA 12349517 scoA Helicobacter pylori 35A 3-oxoacid CoA-transferase YP_005770008.1 881177 R 585535 CDS YP_005770009.1 384896020 12349518 complement(881886..883088) 1 NC_017360.1 COG: COG0183; Pfam: PF00108, PF02803; InterPro: IPR002155; acetyl-CoA C-acetyltransferase 883088 thlA 12349518 thlA Helicobacter pylori 35A acetyl-CoA C-acetyltransferase YP_005770009.1 881886 R 585535 CDS YP_005770010.1 384896021 12347959 complement(883328..884140) 1 NC_017360.1 COG: COG3298; polysaccharide biosynthesis protein 884140 wlaX 12347959 wlaX Helicobacter pylori 35A polysaccharide biosynthesis protein YP_005770010.1 883328 R 585535 CDS YP_005770011.1 384896022 12347960 884271..886205 1 NC_017360.1 COG: COG0370; Pfam: PF01926, PF02421, PF07670, PF07664; InterPro: IPR003373; FeoB family ferrous iron (Fe2+) uptake protein 886205 feoB 12347960 feoB Helicobacter pylori 35A FeoB family ferrous iron (Fe2+) uptake protein YP_005770011.1 884271 D 585535 CDS YP_005770012.1 384896023 12347961 886460..888763 1 NC_017360.1 COG: COG4772; Pfam: PF07715, PF00593; InterPro: IPR000531; iron(III) dicitrate transporter 888763 fecA4 12347961 fecA4 Helicobacter pylori 35A iron(III) dicitrate transporter YP_005770012.1 886460 D 585535 CDS YP_005770013.1 384896024 12347962 complement(888802..889548) 1 NC_017360.1 COG: COG1338; Pfam: PF00813; InterPro: IPR005837; flagellar biosynthetic protein FliP 889548 fliP 12347962 fliP Helicobacter pylori 35A flagellar biosynthetic protein FliP YP_005770013.1 888802 R 585535 CDS YP_005770014.1 384896025 12347963 889600..890937 1 NC_017360.1 COG: COG1207; Pfam: PF01128, PF00132; InterPro: IPR005882; UDP-N-acetylglucosamine diphosphorylase 890937 glmU 12347963 glmU Helicobacter pylori 35A UDP-N-acetylglucosamine diphosphorylase YP_005770014.1 889600 D 585535 CDS YP_005770015.1 384896026 12347964 891154..891489 1 NC_017360.1 hypothetical protein 891489 12347964 HMPREF4655_20918 Helicobacter pylori 35A hypothetical protein YP_005770015.1 891154 D 585535 CDS YP_005770016.1 384896027 12347965 891496..892047 1 NC_017360.1 hypothetical protein 892047 12347965 HMPREF4655_20919 Helicobacter pylori 35A hypothetical protein YP_005770016.1 891496 D 585535 CDS YP_005770017.1 384896028 12347966 892214..894580 1 NC_017360.1 COG: COG0209; Pfam: PF03477, PF00317, PF02867; InterPro: IPR013346; ribonucleotide-diphosphate reductase subunit alpha 894580 nrdA 12347966 nrdA Helicobacter pylori 35A ribonucleotide-diphosphate reductase subunit alpha YP_005770017.1 892214 D 585535 CDS YP_005770018.1 384896029 12347967 894642..895589 1 NC_017360.1 COG: COG0673; Pfam: PF01408, PF02894; InterPro: IPR016040; gfo/Idh/MocA family oxidoreductase 895589 wbpB 12347967 wbpB Helicobacter pylori 35A gfo/Idh/MocA family oxidoreductase YP_005770018.1 894642 D 585535 CDS YP_005770019.1 384896030 12347968 895703..896470 1 NC_017360.1 COG: COG0730; Pfam: PF01925; InterPro: IPR002781; hypothetical protein 896470 12347968 HMPREF4655_20922 Helicobacter pylori 35A hypothetical protein YP_005770019.1 895703 D 585535 CDS YP_005770020.1 384896031 12347969 896474..896980 1 NC_017360.1 COG: COG0350; Pfam: PF02870, PF01035; InterPro: IPR014048; methylated-DNA--protein-cysteine methyltransferase 896980 dat 12347969 dat Helicobacter pylori 35A methylated-DNA--protein-cysteine methyltransferase YP_005770020.1 896474 D 585535 CDS YP_005770021.1 384896032 12347970 complement(897043..898110) 1 NC_017360.1 COG: COG0582; Pfam: PF00589; InterPro: IPR013762; tyrosine recombinase XerC 898110 xerC 12347970 xerC Helicobacter pylori 35A tyrosine recombinase XerC YP_005770021.1 897043 R 585535 CDS YP_005770022.1 384896033 12347971 complement(898117..898929) 1 NC_017360.1 hypothetical protein 898929 12347971 HMPREF4655_20925 Helicobacter pylori 35A hypothetical protein YP_005770022.1 898117 R 585535 CDS YP_005770023.1 384896034 12347972 complement(899196..900368) 1 NC_017360.1 COG: COG0436; Pfam: PF00155; InterPro: IPR004839; aspartate transaminase 900368 aspC 12347972 aspC Helicobacter pylori 35A aspartate transaminase YP_005770023.1 899196 R 585535 CDS YP_005770024.1 384896035 12347973 complement(900527..901339) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 901339 12347973 HMPREF4655_20927 Helicobacter pylori 35A outer membrane protein YP_005770024.1 900527 R 585535 CDS YP_005770025.1 384896036 12347974 complement(901461..902771) 1 NC_017360.1 hypothetical protein 902771 12347974 HMPREF4655_20928 Helicobacter pylori 35A hypothetical protein YP_005770025.1 901461 R 585535 CDS YP_005770026.1 384896037 12347976 complement(905771..907591) 1 NC_017360.1 COG: COG4889; Pfam: PF04471, PF04851; InterPro: IPR014001; helicase domain-containing protein 907591 12347976 HMPREF4655_20933 Helicobacter pylori 35A helicase domain-containing protein YP_005770026.1 905771 R 585535 CDS YP_005770027.1 384896038 12347977 complement(907667..908956) 1 NC_017360.1 COG: COG0247; Pfam: PF00037, PF02754; InterPro: IPR004017; iron-sulfur cluster-binding domain protein 908956 12347977 HMPREF4655_20934 Helicobacter pylori 35A iron-sulfur cluster-binding domain protein YP_005770027.1 907667 R 585535 CDS YP_005770028.1 384896039 12347978 complement(908953..910326) 1 NC_017360.1 COG: COG0635; Pfam: PF04055, PF06969; InterPro: IPR004558; coproporphyrinogen dehydrogenase 910326 hemN 12347978 hemN Helicobacter pylori 35A coproporphyrinogen dehydrogenase YP_005770028.1 908953 R 585535 CDS YP_005770029.1 384896040 12347979 complement(910326..910841) 1 NC_017360.1 hypothetical protein 910841 12347979 HMPREF4655_20936 Helicobacter pylori 35A hypothetical protein YP_005770029.1 910326 R 585535 CDS YP_005770030.1 384896041 12347980 complement(910879..911976) 1 NC_017360.1 COG: COG0082; Pfam: PF01264; InterPro: IPR000453; chorismate synthase 911976 aroC 12347980 aroC Helicobacter pylori 35A chorismate synthase YP_005770030.1 910879 R 585535 CDS YP_005770031.1 384896042 12347981 complement(911973..912689) 1 NC_017360.1 COG: COG0571; Pfam: PF00636, PF00035; InterPro: IPR011907; ribonuclease III 912689 rnc 12347981 rnc Helicobacter pylori 35A ribonuclease III YP_005770031.1 911973 R 585535 CDS YP_005770032.1 384896043 12347982 complement(912664..913128) 1 NC_017360.1 COG: COG0328; Pfam: PF00075; InterPro: IPR002156; ribonuclease H 913128 rnhA 12347982 rnhA Helicobacter pylori 35A ribonuclease H YP_005770032.1 912664 R 585535 CDS YP_005770033.1 384896044 12347983 complement(913129..914136) 1 NC_017360.1 hypothetical protein 914136 12347983 HMPREF4655_20940 Helicobacter pylori 35A hypothetical protein YP_005770033.1 913129 R 585535 CDS YP_005770034.1 384896045 12347984 complement(914147..915364) 1 NC_017360.1 Pfam: PF09312; SurA domain-containing protein 915364 12347984 HMPREF4655_20941 Helicobacter pylori 35A SurA domain-containing protein YP_005770034.1 914147 R 585535 CDS YP_005770035.1 384896046 12347985 complement(915364..916788) 1 NC_017360.1 COG: COG0064; Pfam: PF02934, PF01162, PF02637; InterPro: IPR004413; glutamyl-tRNA(Gln) amidotransferase subunit B 916788 gatB 12347985 gatB Helicobacter pylori 35A glutamyl-tRNA(Gln) amidotransferase subunit B YP_005770035.1 915364 R 585535 CDS YP_005770036.1 384896047 12347986 complement(916788..918092) 1 NC_017360.1 COG: COG0612; Pfam: PF00675, PF05193; InterPro: IPR011237; processing protease 918092 ymxG 12347986 ymxG Helicobacter pylori 35A processing protease YP_005770036.1 916788 R 585535 CDS YP_005770037.1 384896048 12347987 complement(918089..919180) 1 NC_017360.1 COG: COG1060; Pfam: PF04055; InterPro: IPR005244; SCO4550 family menaquinone biosynthesis protein 919180 12347987 HMPREF4655_20944 Helicobacter pylori 35A SCO4550 family menaquinone biosynthesis protein YP_005770037.1 918089 R 585535 CDS YP_005770038.1 384896049 12347988 complement(919152..921782) 1 NC_017360.1 COG: COG4775; Pfam: PF07244, PF01103; InterPro: IPR000184; outer membrane protein assembly complex 921782 yaeT 12347988 yaeT Helicobacter pylori 35A outer membrane protein assembly complex YP_005770038.1 919152 R 585535 CDS YP_005770039.1 384896050 12347989 complement(921955..923079) 1 NC_017360.1 COG: COG1060; Pfam: PF04055; InterPro: IPR005244; SCO4494 family menaquinone biosynthesis protein 923079 12347989 HMPREF4655_20946 Helicobacter pylori 35A SCO4494 family menaquinone biosynthesis protein YP_005770039.1 921955 R 585535 CDS YP_005770040.1 384896051 12347990 923333..923836 1 NC_017360.1 COG: COG1528; Pfam: PF00210; InterPro: IPR012347; ferroxidase 923836 ftnA 12347990 ftnA Helicobacter pylori 35A ferroxidase YP_005770040.1 923333 D 585535 CDS YP_005770041.1 384896052 12347991 923852..924475 1 NC_017360.1 COG: COG0560; Pfam: PF00702; InterPro: IPR004469; phosphoserine phosphatase 924475 pspH 12347991 pspH Helicobacter pylori 35A phosphoserine phosphatase YP_005770041.1 923852 D 585535 CDS YP_005770042.1 384896053 12347992 924515..925840 1 NC_017360.1 InterPro: IPR001503; alpha-1,3/4-fucosyltransferase 925840 12347992 HMPREF4655_20949 Helicobacter pylori 35A alpha-1,3/4-fucosyltransferase YP_005770042.1 924515 D 585535 CDS YP_005770043.1 384896054 12347993 complement(925849..926487) 1 NC_017360.1 Pfam: PF03167; family 4 uracil-DNA glycosylase 926487 12347993 HMPREF4655_20950 Helicobacter pylori 35A family 4 uracil-DNA glycosylase YP_005770043.1 925849 R 585535 CDS YP_005770044.1 384896055 12347994 complement(926484..927890) 1 NC_017360.1 COG: COG1027; Pfam: PF00206; InterPro: IPR004708; aspartate ammonia-lyase 927890 aspA 12347994 aspA Helicobacter pylori 35A aspartate ammonia-lyase YP_005770044.1 926484 R 585535 CDS YP_005770045.1 384896056 12347995 complement(927948..929216) 1 NC_017360.1 COG: COG0766; Pfam: PF00275; InterPro: IPR005750; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 929216 murA 12347995 murA Helicobacter pylori 35A UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_005770045.1 927948 R 585535 CDS YP_005770046.1 384896057 12347996 complement(929219..929626) 1 NC_017360.1 hypothetical protein 929626 12347996 HMPREF4655_20953 Helicobacter pylori 35A hypothetical protein YP_005770046.1 929219 R 585535 CDS YP_005770047.1 384896058 12347997 complement(929638..930459) 1 NC_017360.1 COG: COG1210; Pfam: PF00483; InterPro: IPR005835; UTP--glucose-1-phosphate uridylyltransferase 930459 galU 12347997 galU Helicobacter pylori 35A UTP--glucose-1-phosphate uridylyltransferase YP_005770047.1 929638 R 585535 CDS YP_005770048.1 384896059 12347998 complement(930456..932138) 1 NC_017360.1 COG: COG0741; Pfam: PF01464; InterPro: IPR008258; soluble lytic murein transglycosylase 932138 slt 12347998 slt Helicobacter pylori 35A soluble lytic murein transglycosylase YP_005770048.1 930456 R 585535 CDS YP_005770049.1 384896060 12347999 complement(932147..932440) 1 NC_017360.1 COG: COG0762; Pfam: PF02325; InterPro: IPR003425; yggt family protein 932440 12347999 HMPREF4655_20956 Helicobacter pylori 35A yggt family protein YP_005770049.1 932147 R 585535 CDS YP_005770050.1 384896061 12348000 complement(932437..933756) 1 NC_017360.1 COG: COG0008; Pfam: PF00749; InterPro: IPR004527; glutamate--tRNA ligase 933756 gltX 12348000 gltX Helicobacter pylori 35A glutamate--tRNA ligase YP_005770050.1 932437 R 585535 CDS YP_005770051.1 384896062 12348001 complement(933909..934562) 1 NC_017360.1 COG: COG0778; Pfam: PF00881; InterPro: IPR000415; NAD(P)H-flavin oxidoreductase 934562 frp 12348001 frp Helicobacter pylori 35A NAD(P)H-flavin oxidoreductase YP_005770051.1 933909 R 585535 CDS YP_005770052.1 384896063 12348002 complement(934678..935901) 1 NC_017360.1 COG: COG0617; Pfam: PF01743; InterPro: IPR002646; poly(A) polymerase 935901 papS 12348002 papS Helicobacter pylori 35A poly(A) polymerase YP_005770052.1 934678 R 585535 CDS YP_005770053.1 384896064 12348003 935963..936643 1 NC_017360.1 COG: COG0603; Pfam: PF06508; InterPro: IPR004479; transcription regulator ExsB 936643 exsB 12348003 exsB Helicobacter pylori 35A transcription regulator ExsB YP_005770053.1 935963 D 585535 CDS YP_005770054.1 384896065 12348004 complement(936700..937614) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 937614 12348004 HMPREF4655_20961 Helicobacter pylori 35A outer membrane protein YP_005770054.1 936700 R 585535 CDS YP_005770055.1 384896066 12348005 937791..938243 1 NC_017360.1 hypothetical protein 938243 12348005 HMPREF4655_20962 Helicobacter pylori 35A hypothetical protein YP_005770055.1 937791 D 585535 CDS YP_005770056.1 384896067 12348006 938369..938794 1 NC_017360.1 hypothetical protein 938794 12348006 HMPREF4655_20963 Helicobacter pylori 35A hypothetical protein YP_005770056.1 938369 D 585535 CDS YP_005770057.1 384896068 12348007 complement(938799..940337) 1 NC_017360.1 hypothetical protein 940337 12348007 HMPREF4655_20964 Helicobacter pylori 35A hypothetical protein YP_005770057.1 938799 R 585535 CDS YP_005770058.1 384896069 12348008 complement(940339..940875) 1 NC_017360.1 COG: COG0680; Pfam: PF01750; InterPro: IPR000671; hydrogenase expression/formation protein 940875 hybD 12348008 hybD Helicobacter pylori 35A hydrogenase expression/formation protein YP_005770058.1 940339 R 585535 CDS YP_005770059.1 384896070 12348009 complement(940872..941546) 1 NC_017360.1 COG: COG1969; Pfam: PF01292; InterPro: IPR000516; Ni/Fe-hydrogenase 941546 cybH 12348009 cybH Helicobacter pylori 35A Ni/Fe-hydrogenase YP_005770059.1 940872 R 585535 CDS YP_005770060.1 384896071 12348010 complement(941559..943295) 1 NC_017360.1 COG: COG0374; Pfam: PF00374; InterPro: IPR001501; quinone-reactive Ni/Fe hydrogenase HydB 943295 hydB 12348010 hydB Helicobacter pylori 35A quinone-reactive Ni/Fe hydrogenase HydB YP_005770060.1 941559 R 585535 CDS YP_005770061.1 384896072 12348011 complement(943312..944466) 1 NC_017360.1 COG: COG1740; Pfam: PF08425, PF01058; InterPro: IPR001821; hydrogenase (NiFe) small subunit HydA 944466 hydA 12348011 hydA Helicobacter pylori 35A hydrogenase (NiFe) small subunit HydA YP_005770061.1 943312 R 585535 CDS YP_005770062.1 384896073 12348012 944602..945186 1 NC_017360.1 COG: COG2249; Pfam: PF02525; InterPro: IPR003680; NAD(P)H quinone dehydrogenase MdaB 945186 mdaB 12348012 mdaB Helicobacter pylori 35A NAD(P)H quinone dehydrogenase MdaB YP_005770062.1 944602 D 585535 CDS YP_005770063.1 384896074 12348014 complement(947403..948461) 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; hypothetical protein 948461 12348014 HMPREF4655_20972 Helicobacter pylori 35A hypothetical protein YP_005770063.1 947403 R 585535 CDS YP_005770064.1 384896075 12348015 complement(948473..949678) 1 NC_017360.1 COG: COG2171; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase 949678 dapD 12348015 dapD Helicobacter pylori 35A 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransferase YP_005770064.1 948473 R 585535 CDS YP_005770065.1 384896076 12348016 complement(949681..950760) 1 NC_017360.1 COG: COG0821; Pfam: PF04551; InterPro: IPR004588; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 950760 ispG 12348016 ispG Helicobacter pylori 35A 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_005770065.1 949681 R 585535 CDS YP_005770066.1 384896077 12348017 950915..952042 1 NC_017360.1 COG: COG0436; Pfam: PF00155; InterPro: IPR004839; N-succinyldiaminopimelate aminotransferase 952042 aspB 12348017 aspB Helicobacter pylori 35A N-succinyldiaminopimelate aminotransferase YP_005770066.1 950915 D 585535 CDS YP_005770067.1 384896078 12348018 952035..953384 1 NC_017360.1 COG: COG0773; Pfam: PF01225, PF08245, PF02875; InterPro: IPR005758; UDP-N-acetylmuramate--L-alanine ligase 953384 murC 12348018 murC Helicobacter pylori 35A UDP-N-acetylmuramate--L-alanine ligase YP_005770067.1 952035 D 585535 CDS YP_005770068.1 384896079 12348019 953384..953749 1 NC_017360.1 hypothetical protein 953749 12348019 HMPREF4655_20977 Helicobacter pylori 35A hypothetical protein YP_005770068.1 953384 D 585535 CDS YP_005770069.1 384896080 12348020 953768..956023 1 NC_017360.1 COG: COG1193; Pfam: PF00488, PF01713; InterPro: IPR005747; DNA mismatch repair protein 956023 mutS 12348020 mutS Helicobacter pylori 35A DNA mismatch repair protein YP_005770069.1 953768 D 585535 CDS YP_005770070.1 384896081 12348021 complement(956166..956687) 1 NC_017360.1 COG: COG0221; Pfam: PF00719; InterPro: IPR008162; inorganic diphosphatase 956687 ppa 12348021 ppa Helicobacter pylori 35A inorganic diphosphatase YP_005770070.1 956166 R 585535 CDS YP_005770071.1 384896082 12348023 complement(958144..959142) 1 NC_017360.1 COG: COG3306; Pfam: PF01755; InterPro: IPR002654; glycosyltransferase 959142 12348023 HMPREF4655_20982 Helicobacter pylori 35A glycosyltransferase YP_005770071.1 958144 R 585535 CDS YP_005770072.1 384896083 12348024 complement(959167..959742) 1 NC_017360.1 COG: COG0563; Pfam: PF00406; InterPro: IPR000850; adenylate kinase 959742 adk 12348024 adk Helicobacter pylori 35A adenylate kinase YP_005770072.1 959167 R 585535 CDS YP_005770073.1 384896084 12348025 complement(959759..961492) 1 NC_017360.1 COG: COG0173; Pfam: PF01336, PF00152, PF02938; InterPro: IPR004524; aspartate--tRNA ligase 961492 aspS 12348025 aspS Helicobacter pylori 35A aspartate--tRNA ligase YP_005770073.1 959759 R 585535 CDS YP_005770074.1 384896085 12348026 complement(961527..962468) 1 NC_017360.1 COG: COG0835; Pfam: PF01584, PF00072; InterPro: IPR002545; chemotaxis protein 962468 cheV2 12348026 cheV2 Helicobacter pylori 35A chemotaxis protein YP_005770074.1 961527 R 585535 CDS YP_005770075.1 384896086 12348027 962546..964516 1 NC_017360.1 COG: COG0272; Pfam: PF01653, PF03120, PF03119, PF00533; InterPro: IPR001679; NAD-dependent DNA ligase LigA 964516 ligA 12348027 ligA Helicobacter pylori 35A NAD-dependent DNA ligase LigA YP_005770075.1 962546 D 585535 CDS YP_005770076.1 384896087 12348028 964617..964949 1 NC_017360.1 hypothetical protein 964949 12348028 HMPREF4655_20987 Helicobacter pylori 35A hypothetical protein YP_005770076.1 964617 D 585535 CDS YP_005770077.1 384896088 12348030 965910..966149 1 NC_017360.1 ABC transporter ATP-binding protein 966149 12348030 HMPREF4655_20990 Helicobacter pylori 35A ABC transporter ATP-binding protein YP_005770077.1 965910 D 585535 CDS YP_005770078.1 384896089 12348031 966166..966567 1 NC_017360.1 ABC transporter ATP-binding protein 966567 12348031 HMPREF4655_20991 Helicobacter pylori 35A ABC transporter ATP-binding protein YP_005770078.1 966166 D 585535 CDS YP_005770079.1 384896090 12348032 complement(966725..976297) 1 NC_017360.1 COG: COG5651; Pfam: PF03077, PF03797; InterPro: IPR005546; vacuolating cytotoxin (VacA) family protein 976297 vacA 12348032 vacA Helicobacter pylori 35A vacuolating cytotoxin (VacA) family protein YP_005770079.1 966725 R 585535 CDS YP_005770080.1 384896091 12348033 complement(976429..976998) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 976998 12348033 HMPREF4655_20993 Helicobacter pylori 35A outer membrane protein YP_005770080.1 976429 R 585535 CDS YP_005770081.1 384896092 12348034 complement(976995..980075) 1 NC_017360.1 COG: COG0841; Pfam: PF00873; InterPro: IPR001036; cytoplasmic pump protein of the hefABC efflux system HefC 980075 hefC 12348034 hefC Helicobacter pylori 35A cytoplasmic pump protein of the hefABC efflux system HefC YP_005770081.1 976995 R 585535 CDS YP_005770082.1 384896093 12348035 complement(980088..980813) 1 NC_017360.1 COG: COG0845; membrane fusion protein of the hefABC efflux system HefB 980813 hefB 12348035 hefB Helicobacter pylori 35A membrane fusion protein of the hefABC efflux system HefB YP_005770082.1 980088 R 585535 CDS YP_005770083.1 384896094 12348036 complement(980803..982281) 1 NC_017360.1 COG: COG1538; Pfam: PF02321; InterPro: IPR003423; outer-membrane protein of the hefABC efflux system HefA 982281 hefA 12348036 hefA Helicobacter pylori 35A outer-membrane protein of the hefABC efflux system HefA YP_005770083.1 980803 R 585535 CDS YP_005770084.1 384896095 12348037 complement(982262..983284) 1 NC_017360.1 COG: COG0407; Pfam: PF01208; InterPro: IPR006361; uroporphyrinogen decarboxylase 983284 hemE 12348037 hemE Helicobacter pylori 35A uroporphyrinogen decarboxylase YP_005770084.1 982262 R 585535 CDS YP_005770085.1 384896096 12348038 complement(983404..984021) 1 NC_017360.1 hypothetical protein 984021 12348038 HMPREF4655_20998 Helicobacter pylori 35A hypothetical protein YP_005770085.1 983404 R 585535 CDS YP_005770086.1 384896097 12348039 complement(984018..984674) 1 NC_017360.1 COG: COG2231; Pfam: PF00730, PF00633; InterPro: IPR003265; 3-methyladenine DNA glycosylase 984674 magIII 12348039 magIII Helicobacter pylori 35A 3-methyladenine DNA glycosylase YP_005770086.1 984018 R 585535 CDS YP_005770087.1 384896098 12348040 complement(984792..986324) 1 NC_017360.1 COG: COG1344; Pfam: PF00669, PF07196, PF00700; InterPro: IPR001492; flagellin A 986324 flaA 12348040 flaA Helicobacter pylori 35A flagellin A YP_005770087.1 984792 R 585535 CDS YP_005770088.1 384896099 12348041 986689..987282 1 NC_017360.1 COG: COG1132; Pfam: PF00005; InterPro: IPR003439; ABC transporter ATP-binding protein 987282 spaB 12348041 spaB Helicobacter pylori 35A ABC transporter ATP-binding protein YP_005770088.1 986689 D 585535 CDS YP_005770089.1 384896100 12348042 987354..988655 1 NC_017360.1 COG: COG0840; Pfam: PF00015; InterPro: IPR004089; hemolysin secretion protein 988655 hylB 12348042 hylB Helicobacter pylori 35A hemolysin secretion protein YP_005770089.1 987354 D 585535 CDS YP_005770090.1 384896101 12348043 988678..989799 1 NC_017360.1 COG: COG0156; Pfam: PF00155; InterPro: IPR015421; 8-amino-7-oxononanoate synthase 989799 bioF 12348043 bioF Helicobacter pylori 35A 8-amino-7-oxononanoate synthase YP_005770090.1 988678 D 585535 CDS YP_005770091.1 384896102 12348044 989800..991779 1 NC_017360.1 COG: COG0744; Pfam: PF00912, PF00905; InterPro: IPR011816; penicillin-binding protein 1A 991779 pbpA 12348044 pbpA Helicobacter pylori 35A penicillin-binding protein 1A YP_005770091.1 989800 D 585535 CDS YP_005770092.1 384896103 12348045 complement(991782..992420) 1 NC_017360.1 tumor necrosis factor alpha-inducing protein 992420 12348045 HMPREF4655_21005 Helicobacter pylori 35A tumor necrosis factor alpha-inducing protein YP_005770092.1 991782 R 585535 CDS YP_005770093.1 384896104 12348047 complement(992836..994305) 1 NC_017360.1 COG: COG1495; Pfam: PF02600; InterPro: IPR003752; DsbB family protein 994305 12348047 HMPREF4655_21006 Helicobacter pylori 35A DsbB family protein YP_005770093.1 992836 R 585535 CDS YP_005770094.1 384896105 12348048 complement(994314..994478) 1 NC_017360.1 hypothetical protein 994478 12348048 HMPREF4655_21007 Helicobacter pylori 35A hypothetical protein YP_005770094.1 994314 R 585535 CDS YP_005770095.1 384896106 12348049 complement(994633..996411) 1 NC_017360.1 COG: COG5610; Pfam: PF00702; JHP540 family protein 996411 12348049 HMPREF4655_21008 Helicobacter pylori 35A JHP540 family protein YP_005770095.1 994633 R 585535 CDS YP_005770096.1 384896107 12348050 complement(996523..997077) 1 NC_017360.1 COG: COG1014; Pfam: PF01558; InterPro: IPR002869; 2-oxoglutarate:acceptor oxidoreductase 997077 oorC 12348050 oorC Helicobacter pylori 35A 2-oxoglutarate:acceptor oxidoreductase YP_005770096.1 996523 R 585535 CDS YP_005770097.1 384896108 12348051 complement(997077..997898) 1 NC_017360.1 COG: COG1013; Pfam: PF02775; InterPro: IPR011766; 2-oxoglutarate:acceptor oxidoreductase 997898 oorB 12348051 oorB Helicobacter pylori 35A 2-oxoglutarate:acceptor oxidoreductase YP_005770097.1 997077 R 585535 CDS YP_005770098.1 384896109 12348052 complement(997900..999027) 1 NC_017360.1 COG: COG0674; Pfam: PF01855; InterPro: IPR002880; 2-oxoglutarate:acceptor oxidoreductase 999027 oorA 12348052 oorA Helicobacter pylori 35A 2-oxoglutarate:acceptor oxidoreductase YP_005770098.1 997900 R 585535 CDS YP_005770099.1 384896110 12348053 complement(999027..999368) 1 NC_017360.1 COG: COG1146; Pfam: PF00037; 2-oxoglutarate-acceptor oxidoreductase subunit OorD 999368 oorD 12348053 oorD Helicobacter pylori 35A 2-oxoglutarate-acceptor oxidoreductase subunit OorD YP_005770099.1 999027 R 585535 CDS YP_005770100.1 384896111 12348054 complement(999546..1000484) 1 NC_017360.1 COG: COG1559; Pfam: PF02618; InterPro: IPR003770; aminodeoxychorismate lyase 1000484 pabC 12348054 pabC Helicobacter pylori 35A aminodeoxychorismate lyase YP_005770100.1 999546 R 585535 CDS YP_005770101.1 384896112 12348055 1000459..1003392 1 NC_017360.1 hypothetical protein 1003392 12348055 HMPREF4655_21014 Helicobacter pylori 35A hypothetical protein YP_005770101.1 1000459 D 585535 CDS YP_005770102.1 384896113 12348056 1003355..1003624 1 NC_017360.1 Pfam: PF04023; InterPro: IPR007167; ferrous iron transport protein A 1003624 feoA 12348056 feoA Helicobacter pylori 35A ferrous iron transport protein A YP_005770102.1 1003355 D 585535 CDS YP_005770103.1 384896114 12348057 1003621..1004277 1 NC_017360.1 COG: COG0177; Pfam: PF00730, PF00633; InterPro: IPR005759; DNA-(apurinic or apyrimidinic site) lyase 1004277 nth 12348057 nth Helicobacter pylori 35A DNA-(apurinic or apyrimidinic site) lyase YP_005770103.1 1003621 D 585535 CDS YP_005770104.1 384896115 12348058 1004359..1004730 1 NC_017360.1 COG: COG1886; Pfam: PF01052; InterPro: IPR012826; flagellar switch protein 1004730 fliN 12348058 fliN Helicobacter pylori 35A flagellar switch protein YP_005770104.1 1004359 D 585535 CDS YP_005770105.1 384896116 12348059 1004727..1005602 1 NC_017360.1 hypothetical protein 1005602 12348059 HMPREF4655_21018 Helicobacter pylori 35A hypothetical protein YP_005770105.1 1004727 D 585535 CDS YP_005770106.1 384896117 12348060 1005586..1006548 1 NC_017360.1 COG: COG0810; InterPro: IPR006260; siderophore-mediated iron transport protein 1006548 12348060 HMPREF4655_21019 Helicobacter pylori 35A siderophore-mediated iron transport protein YP_005770106.1 1005586 D 585535 CDS YP_005770107.1 384896118 12348061 1006552..1007571 1 NC_017360.1 COG: COG0418; InterPro: IPR004721; dihydroorotase 1007571 pyrC2 12348061 pyrC2 Helicobacter pylori 35A dihydroorotase YP_005770107.1 1006552 D 585535 CDS YP_005770108.1 384896119 12348062 1007547..1008665 1 NC_017360.1 hypothetical protein 1008665 12348062 HMPREF4655_21021 Helicobacter pylori 35A hypothetical protein YP_005770108.1 1007547 D 585535 CDS YP_005770109.1 384896120 12348063 1008753..1009226 1 NC_017360.1 hypothetical protein 1009226 12348063 HMPREF4655_21022 Helicobacter pylori 35A hypothetical protein YP_005770109.1 1008753 D 585535 CDS YP_005770110.1 384896121 12348064 1009232..1011262 1 NC_017360.1 Pfam: PF00884; InterPro: IPR000917; hypothetical protein 1011262 12348064 HMPREF4655_21023 Helicobacter pylori 35A hypothetical protein YP_005770110.1 1009232 D 585535 CDS YP_005770111.1 384896122 12348065 1011334..1012227 1 NC_017360.1 COG: COG0190; Pfam: PF00763, PF02882; InterPro: IPR000672; bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase 1012227 folD 12348065 folD Helicobacter pylori 35A bifunctional methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase YP_005770111.1 1011334 D 585535 CDS YP_005770112.1 384896123 12348066 1012227..1013099 1 NC_017360.1 COG: COG0681; Pfam: PF00717; InterPro: IPR000223; signal peptidase I LepB 1013099 lepB 12348066 lepB Helicobacter pylori 35A signal peptidase I LepB YP_005770112.1 1012227 D 585535 CDS YP_005770113.1 384896124 12348067 1013108..1013806 1 NC_017360.1 COG: COG1994; Pfam: PF02163; InterPro: IPR008915; peptidase M50 1013806 12348067 HMPREF4655_21026 Helicobacter pylori 35A peptidase M50 YP_005770113.1 1013108 D 585535 CDS YP_005770114.1 384896125 12348068 1013827..1014282 1 NC_017360.1 COG: COG0698; Pfam: PF02502; InterPro: IPR003500; ribose 5-phosphate isomerase B 1014282 rpiB 12348068 rpiB Helicobacter pylori 35A ribose 5-phosphate isomerase B YP_005770114.1 1013827 D 585535 CDS YP_005770115.1 384896126 12348069 1014334..1014666 1 NC_017360.1 similar to Cj0926; membrane protein 1014666 12348069 HMPREF4655_21028 Helicobacter pylori 35A membrane protein YP_005770115.1 1014334 D 585535 CDS YP_005770116.1 384896127 12348070 1014724..1015263 1 NC_017360.1 COG: COG0503; Pfam: PF00156; InterPro: IPR005764; adenine phosphoribosyltransferase 1015263 apt 12348070 apt Helicobacter pylori 35A adenine phosphoribosyltransferase YP_005770116.1 1014724 D 585535 CDS YP_005770117.1 384896128 12348071 1015278..1015856 1 NC_017360.1 COG: COG0586; Pfam: PF09335; DedA family protein 1015856 12348071 HMPREF4655_21030 Helicobacter pylori 35A DedA family protein YP_005770117.1 1015278 D 585535 CDS YP_005770118.1 384896129 12348072 1015904..1017394 1 NC_017360.1 COG: COG0260; Pfam: PF02789, PF00883; InterPro: IPR011356; leucyl aminopeptidase 1017394 pepA 12348072 pepA Helicobacter pylori 35A leucyl aminopeptidase YP_005770118.1 1015904 D 585535 CDS YP_005770119.1 384896130 12348073 1017396..1018496 1 NC_017360.1 COG: COG0012; Pfam: PF01926, PF06071; InterPro: IPR004396; GTP-binding protein YchF 1018496 ychF 12348073 ychF Helicobacter pylori 35A GTP-binding protein YchF YP_005770119.1 1017396 D 585535 CDS YP_005770120.1 384896131 12348074 1018530..1019402 1 NC_017360.1 Pfam: PF04055; radical SAM protein 1019402 12348074 HMPREF4655_21033 Helicobacter pylori 35A radical SAM protein YP_005770120.1 1018530 D 585535 CDS YP_005770121.1 384896132 12348075 complement(1019532..1020578) 1 NC_017360.1 COG: COG0628; Pfam: PF01594; InterPro: IPR002549; membrane protein 1020578 12348075 HMPREF4655_21034 Helicobacter pylori 35A membrane protein YP_005770121.1 1019532 R 585535 CDS YP_005770122.1 384896133 12348076 1020694..1021515 1 NC_017360.1 COG: COG0253; Pfam: PF01678; InterPro: IPR001653; diaminopimelate epimerase 1021515 dapF 12348076 dapF Helicobacter pylori 35A diaminopimelate epimerase YP_005770122.1 1020694 D 585535 CDS YP_005770123.1 384896134 12348077 1021606..1022253 1 NC_017360.1 COG: COG3059; Pfam: PF04224; InterPro: IPR007339; hypothetical protein 1022253 12348077 HMPREF4655_21036 Helicobacter pylori 35A hypothetical protein YP_005770123.1 1021606 D 585535 CDS YP_005770124.1 384896135 12348078 complement(1022277..1022522) 1 NC_017360.1 hypothetical protein 1022522 12348078 HMPREF4655_21037 Helicobacter pylori 35A hypothetical protein YP_005770124.1 1022277 R 585535 CDS YP_005770125.1 384896136 12348079 1022695..1023945 1 NC_017360.1 hypothetical protein 1023945 12348079 HMPREF4655_21038 Helicobacter pylori 35A hypothetical protein YP_005770125.1 1022695 D 585535 CDS YP_005770126.1 384896137 12348080 1024005..1024259 1 NC_017360.1 COG: COG0828; Pfam: PF01165; InterPro: IPR001911; 30S ribosomal protein S21 1024259 rpsU 12348080 rpsU Helicobacter pylori 35A 30S ribosomal protein S21 YP_005770126.1 1024005 D 585535 CDS YP_005770127.1 384896138 12348081 1024296..1025039 1 NC_017360.1 COG: COG1028; Pfam: PF00106; InterPro: IPR016040; 3-oxoacyl-ACP reductase 1025039 fabG 12348081 fabG Helicobacter pylori 35A 3-oxoacyl-ACP reductase YP_005770127.1 1024296 D 585535 CDS YP_005770128.1 384896139 12348082 1025270..1025506 1 NC_017360.1 COG: COG0236; Pfam: PF00550; InterPro: IPR003231; acyl carrier protein 1025506 acpP 12348082 acpP Helicobacter pylori 35A acyl carrier protein YP_005770128.1 1025270 D 585535 CDS YP_005770129.1 384896140 12348083 1025832..1027046 1 NC_017360.1 COG: COG0304; Pfam: PF00109, PF02801; InterPro: IPR000794; 3-oxoacyl-(acyl-carrier-protein) synthase II 1027046 fabF 12348083 fabF Helicobacter pylori 35A 3-oxoacyl-(acyl-carrier-protein) synthase II YP_005770129.1 1025832 D 585535 CDS YP_005770130.1 384896141 12348084 1027069..1028007 1 NC_017360.1 COG: COG0825; Pfam: PF03255, PF01039; InterPro: IPR001095; acetyl-coA carboxylase carboxyl transferase subunit alpha 1028007 accA 12348084 accA Helicobacter pylori 35A acetyl-coA carboxylase carboxyl transferase subunit alpha YP_005770130.1 1027069 D 585535 CDS YP_005770131.1 384896142 12348085 complement(1028087..1028266) 1 NC_017360.1 hypothetical protein 1028266 12348085 HMPREF4655_21044 Helicobacter pylori 35A hypothetical protein YP_005770131.1 1028087 R 585535 CDS YP_005770132.1 384896143 12348086 1028475..1028912 1 NC_017360.1 hypothetical protein 1028912 12348086 HMPREF4655_21045 Helicobacter pylori 35A hypothetical protein YP_005770132.1 1028475 D 585535 CDS YP_005770133.1 384896144 12348087 complement(1028983..1029804) 1 NC_017360.1 hypothetical protein 1029804 12348087 HMPREF4655_21046 Helicobacter pylori 35A hypothetical protein YP_005770133.1 1028983 R 585535 CDS YP_005770134.1 384896145 12348088 complement(1029801..1030766) 1 NC_017360.1 hypothetical protein 1030766 12348088 HMPREF4655_21047 Helicobacter pylori 35A hypothetical protein YP_005770134.1 1029801 R 585535 CDS YP_005770135.1 384896146 12348089 complement(1030779..1031462) 1 NC_017360.1 COG: COG0566; Pfam: PF08032, PF00588; InterPro: IPR004441; RNA methyltransferase 1031462 12348089 HMPREF4655_21048 Helicobacter pylori 35A RNA methyltransferase YP_005770135.1 1030779 R 585535 CDS YP_005770136.1 384896147 12348090 complement(1031475..1032338) 1 NC_017360.1 COG: COG0313; Pfam: PF00590; InterPro: IPR008189; tetrapyrrole methylase 1032338 12348090 HMPREF4655_21049 Helicobacter pylori 35A tetrapyrrole methylase YP_005770136.1 1031475 R 585535 CDS YP_005770137.1 384896148 12348091 complement(1032363..1032566) 1 NC_017360.1 COG: COG0254; Pfam: PF01197; InterPro: IPR002150; 50S ribosomal protein L31 1032566 rpmE 12348091 rpmE Helicobacter pylori 35A 50S ribosomal protein L31 YP_005770137.1 1032363 R 585535 CDS YP_005770138.1 384896149 12348092 1032831..1034147 1 NC_017360.1 COG: COG1158; Pfam: PF07498, PF07497, PF00006; InterPro: IPR004665; transcription termination factor Rho 1034147 rho 12348092 rho Helicobacter pylori 35A transcription termination factor Rho YP_005770138.1 1032831 D 585535 CDS YP_005770139.1 384896150 12348093 1034183..1034950 1 NC_017360.1 COG: COG0796; Pfam: PF01177; InterPro: IPR004391; glutamate racemase 1034950 murI 12348093 murI Helicobacter pylori 35A glutamate racemase YP_005770139.1 1034183 D 585535 CDS YP_005770140.1 384896151 12348094 1035074..1035358 1 NC_017360.1 Pfam: PF07282; InterPro: IPR010095; transposase 1035358 tnpB 12348094 tnpB Helicobacter pylori 35A transposase YP_005770140.1 1035074 D 585535 CDS YP_005770141.1 384896152 12348095 complement(1035429..1038959) 1 NC_017360.1 Pfam: PF03507; InterPro: IPR005169; cytotoxicity-associated immunodominant antigen A 1038959 cagA 12348095 cagA Helicobacter pylori 35A cytotoxicity-associated immunodominant antigen A YP_005770141.1 1035429 R 585535 CDS YP_005770142.1 384896153 12348096 1039211..1039438 1 NC_017360.1 cag pathogenicity island protein (cagB) 1039438 cagB 12348096 cagB Helicobacter pylori 35A cag pathogenicity island protein (cagB) YP_005770142.1 1039211 D 585535 CDS YP_005770143.1 384896154 12348097 1039605..1039952 1 NC_017360.1 cag island protein 1039952 cagC 12348097 cagC Helicobacter pylori 35A cag island protein YP_005770143.1 1039605 D 585535 CDS YP_005770144.1 384896155 12348098 1039936..1040577 1 NC_017360.1 cag pathogenicity island protein 1040577 12348098 HMPREF4655_21057 Helicobacter pylori 35A cag pathogenicity island protein YP_005770144.1 1039936 D 585535 CDS YP_005770145.1 384896156 12348099 1040586..1043537 1 NC_017360.1 COG: COG3451; Pfam: PF03135; InterPro: IPR004346; CAG pathogenicity island protein 23 1043537 12348099 HMPREF4655_21058 Helicobacter pylori 35A CAG pathogenicity island protein 23 YP_005770145.1 1040586 D 585535 CDS YP_005770146.1 384896157 12348100 1043539..1044345 1 NC_017360.1 cag pathogenicity island protein 1044345 12348100 HMPREF4655_21059 Helicobacter pylori 35A cag pathogenicity island protein YP_005770146.1 1043539 D 585535 CDS YP_005770147.1 384896158 12348101 1044400..1044828 1 NC_017360.1 cag pathogenicity island protein 1044828 12348101 HMPREF4655_21060 Helicobacter pylori 35A cag pathogenicity island protein YP_005770147.1 1044400 D 585535 CDS YP_005770148.1 384896159 12348102 1044830..1045942 1 NC_017360.1 cag pathogenicity island protein 1045942 12348102 HMPREF4655_21061 Helicobacter pylori 35A cag pathogenicity island protein YP_005770148.1 1044830 D 585535 CDS YP_005770149.1 384896160 12348103 1045953..1047098 1 NC_017360.1 cag pathogenicity island protein 1047098 12348103 HMPREF4655_21062 Helicobacter pylori 35A cag pathogenicity island protein YP_005770149.1 1045953 D 585535 CDS YP_005770150.1 384896161 12348104 1047095..1047808 1 NC_017360.1 cag pathogenicity island protein 1047808 12348104 HMPREF4655_21063 Helicobacter pylori 35A cag pathogenicity island protein YP_005770150.1 1047095 D 585535 CDS YP_005770151.1 384896162 12348105 complement(1047891..1048811) 1 NC_017360.1 cag pathogenicity island protein 1048811 12348105 HMPREF4655_21064 Helicobacter pylori 35A cag pathogenicity island protein YP_005770151.1 1047891 R 585535 CDS YP_005770152.1 384896163 12348106 complement(1048826..1049956) 1 NC_017360.1 cag pathogenicity island protein 1049956 12348106 HMPREF4655_21065 Helicobacter pylori 35A cag pathogenicity island protein YP_005770152.1 1048826 R 585535 CDS YP_005770153.1 384896164 12348107 1050381..1050725 1 NC_017360.1 cag pathogenicity island protein 1050725 12348107 HMPREF4655_21066 Helicobacter pylori 35A cag pathogenicity island protein YP_005770153.1 1050381 D 585535 CDS YP_005770154.1 384896165 12348108 complement(1051374..1051529) 1 NC_017360.1 hypothetical protein 1051529 12348108 HMPREF4655_21067 Helicobacter pylori 35A hypothetical protein YP_005770154.1 1051374 R 585535 CDS YP_005770155.1 384896166 12348109 complement(1051585..1051965) 1 NC_017360.1 cag pathogenicity island protein 1051965 12348109 HMPREF4655_21068 Helicobacter pylori 35A cag pathogenicity island protein YP_005770155.1 1051585 R 585535 CDS YP_005770156.1 384896167 12348110 complement(1052306..1052437) 1 NC_017360.1 hypothetical protein 1052437 12348110 HMPREF4655_21069 Helicobacter pylori 35A hypothetical protein YP_005770156.1 1052306 R 585535 CDS YP_005770157.1 384896168 12348111 1052473..1052610 1 NC_017360.1 hypothetical protein 1052610 12348111 HMPREF4655_21070 Helicobacter pylori 35A hypothetical protein YP_005770157.1 1052473 D 585535 CDS YP_005770158.1 384896169 12348112 1052776..1053375 1 NC_017360.1 CAG pathogenicity island protein 13 1053375 12348112 HMPREF4655_21071 Helicobacter pylori 35A CAG pathogenicity island protein 13 YP_005770158.1 1052776 D 585535 CDS YP_005770159.1 384896170 12348113 complement(1053577..1054419) 1 NC_017360.1 CAG pathogenicity island protein 12 1054419 12348113 HMPREF4655_21072 Helicobacter pylori 35A CAG pathogenicity island protein 12 YP_005770159.1 1053577 R 585535 CDS YP_005770160.1 384896171 12348114 complement(1054432..1055082) 1 NC_017360.1 cag pathogenicity island protein 1055082 12348114 HMPREF4655_21073 Helicobacter pylori 35A cag pathogenicity island protein YP_005770160.1 1054432 R 585535 CDS YP_005770161.1 384896172 12348115 1055356..1056114 1 NC_017360.1 COG: COG3736; Pfam: PF04335; InterPro: IPR007430; cag pathogenicity island protein 1056114 12348115 HMPREF4655_21074 Helicobacter pylori 35A cag pathogenicity island protein YP_005770161.1 1055356 D 585535 CDS YP_005770162.1 384896173 12348116 1056119..1057726 1 NC_017360.1 cag pathogenicity island protein 1057726 12348116 HMPREF4655_21075 Helicobacter pylori 35A cag pathogenicity island protein YP_005770162.1 1056119 D 585535 CDS YP_005770163.1 384896174 12348117 1057779..1059347 1 NC_017360.1 COG: COG3504; Pfam: PF03524; InterPro: IPR010258; cag pathogenicity island protein 1059347 12348117 HMPREF4655_21076 Helicobacter pylori 35A cag pathogenicity island protein YP_005770163.1 1057779 D 585535 CDS YP_005770164.1 384896175 12348118 1059362..1064755 1 NC_017360.1 COG: COG2948; Pfam: PF07337, PF03743; InterPro: IPR010853; cag pathogenicity island protein 1064755 12348118 HMPREF4655_21077 Helicobacter pylori 35A cag pathogenicity island protein YP_005770164.1 1059362 D 585535 CDS YP_005770165.1 384896176 12348119 1064745..1064879 1 NC_017360.1 hypothetical protein 1064879 12348119 HMPREF4655_21078 Helicobacter pylori 35A hypothetical protein YP_005770165.1 1064745 D 585535 CDS YP_005770166.1 384896177 12348120 1064892..1065491 1 NC_017360.1 Pfam: PF09053; InterPro: IPR015139; cag pathogenicity island protein 1065491 12348120 HMPREF4655_21079 Helicobacter pylori 35A cag pathogenicity island protein YP_005770166.1 1064892 D 585535 CDS YP_005770167.1 384896178 12348121 1065496..1066488 1 NC_017360.1 COG: COG0630; Pfam: PF00437; InterPro: IPR001482; P-type DNA transfer ATPase VirB11 1066488 virB 12348121 virB Helicobacter pylori 35A P-type DNA transfer ATPase VirB11 YP_005770167.1 1065496 D 585535 CDS YP_005770168.1 384896179 12348122 1066497..1068743 1 NC_017360.1 COG: COG3505; Pfam: PF02534; InterPro: IPR003688; cag pathogenicity island protein 1068743 12348122 HMPREF4655_21081 Helicobacter pylori 35A cag pathogenicity island protein YP_005770168.1 1066497 D 585535 CDS YP_005770169.1 384896180 12348123 complement(1069051..1069560) 1 NC_017360.1 cag pathogenicity island protein 1069560 12348123 HMPREF4655_21082 Helicobacter pylori 35A cag pathogenicity island protein YP_005770169.1 1069051 R 585535 CDS YP_005770170.1 384896181 12348124 complement(1069570..1071015) 1 NC_017360.1 cag pathogenicity island protein 1071015 12348124 HMPREF4655_21083 Helicobacter pylori 35A cag pathogenicity island protein YP_005770170.1 1069570 R 585535 CDS YP_005770171.1 384896182 12348125 complement(1071031..1071228) 1 NC_017360.1 cag pathogenicity island protein (cage, cag2) 1071228 12348125 HMPREF4655_21084 Helicobacter pylori 35A cag pathogenicity island protein (cage, cag2) YP_005770171.1 1071031 R 585535 CDS YP_005770172.1 384896183 12348126 complement(1071244..1071591) 1 NC_017360.1 cag pathogenicity island protein 1071591 12348126 HMPREF4655_21085 Helicobacter pylori 35A cag pathogenicity island protein YP_005770172.1 1071244 R 585535 CDS YP_005770173.1 384896184 12348127 1071702..1072574 1 NC_017360.1 Pfam: PF08238; InterPro: IPR011990; Sel1 repeat superfamily protein 1072574 12348127 HMPREF4655_21086 Helicobacter pylori 35A Sel1 repeat superfamily protein YP_005770173.1 1071702 D 585535 CDS YP_005770174.1 384896185 12348128 complement(1072644..1073636) 1 NC_017360.1 COG: COG3034; hypothetical protein 1073636 12348128 HMPREF4655_21087 Helicobacter pylori 35A hypothetical protein YP_005770174.1 1072644 R 585535 CDS YP_005770175.1 384896186 12348129 complement(1073633..1074538) 1 NC_017360.1 COG: COG1159; Pfam: PF01926, PF07650; InterPro: IPR005662; GTP-binding protein Era 1074538 era 12348129 era Helicobacter pylori 35A GTP-binding protein Era YP_005770175.1 1073633 R 585535 CDS YP_005770176.1 384896187 12348130 complement(1074538..1075869) 1 NC_017360.1 COG: COG1220; Pfam: PF07724; InterPro: IPR004491; ATP-dependent hsl protease ATP-binding subunit HslU 1075869 hslU 12348130 hslU Helicobacter pylori 35A ATP-dependent hsl protease ATP-binding subunit HslU YP_005770176.1 1074538 R 585535 CDS YP_005770177.1 384896188 12348131 complement(1075869..1076411) 1 NC_017360.1 COG: COG5405; Pfam: PF00227; InterPro: IPR001353; ATP-dependent protease HslVU 1076411 hslV 12348131 hslV Helicobacter pylori 35A ATP-dependent protease HslVU YP_005770177.1 1075869 R 585535 CDS YP_005770178.1 384896189 12348132 complement(1076415..1076864) 1 NC_017360.1 COG: COG0359; Pfam: PF01281, PF03948; InterPro: IPR000244; 50S ribosomal protein L9 1076864 rplI 12348132 rplI Helicobacter pylori 35A 50S ribosomal protein L9 YP_005770178.1 1076415 R 585535 CDS YP_005770179.1 384896190 12348133 complement(1076927..1079101) 1 NC_017360.1 COG: COG1479; Pfam: PF03235, PF07510; InterPro: IPR004919; hypothetical protein DUF262 1079101 12348133 HMPREF4655_21092 Helicobacter pylori 35A hypothetical protein DUF262 YP_005770179.1 1076927 R 585535 CDS YP_005770180.1 384896191 12348134 1079131..1080576 1 NC_017360.1 COG: COG0174; Pfam: PF03951, PF00120; InterPro: IPR004809; glutamate--ammonia ligase 1080576 glnA 12348134 glnA Helicobacter pylori 35A glutamate--ammonia ligase YP_005770180.1 1079131 D 585535 CDS YP_005770181.1 384896192 12348135 complement(1080785..1080952) 1 NC_017360.1 urease-enhancing factor 1080952 lpp 12348135 lpp Helicobacter pylori 35A urease-enhancing factor YP_005770181.1 1080785 R 585535 CDS YP_005770182.1 384896193 12348136 complement(1081229..1081993) 1 NC_017360.1 COG: COG0289; Pfam: PF01113, PF05173; InterPro: IPR011770; dihydrodipicolinate reductase 1081993 dapB 12348136 dapB Helicobacter pylori 35A dihydrodipicolinate reductase YP_005770182.1 1081229 R 585535 CDS YP_005770183.1 384896194 12348137 complement(1082016..1083395) 1 NC_017360.1 COG: COG0277; Pfam: PF01565, PF02913; InterPro: IPR004490; glycolate oxidase 1083395 glcD 12348137 glcD Helicobacter pylori 35A glycolate oxidase YP_005770183.1 1082016 R 585535 CDS YP_005770184.1 384896195 12348138 complement(1083397..1084719) 1 NC_017360.1 plasminogen-binding protein PgbA 1084719 12348138 HMPREF4655_21097 Helicobacter pylori 35A plasminogen-binding protein PgbA YP_005770184.1 1083397 R 585535 CDS YP_005770185.1 384896196 12348139 complement(1084712..1085350) 1 NC_017360.1 COG: COG0494; Pfam: PF00293; InterPro: IPR000086; UDP-sugar diphosphatase 1085350 nudT14 12348139 nudT14 Helicobacter pylori 35A UDP-sugar diphosphatase YP_005770185.1 1084712 R 585535 CDS YP_005770186.1 384896197 12348140 complement(1085350..1086558) 1 NC_017360.1 COG: COG0739; Pfam: PF01551; InterPro: IPR002886; M23/M37 family peptidase 1086558 12348140 HMPREF4655_21099 Helicobacter pylori 35A M23/M37 family peptidase YP_005770186.1 1085350 R 585535 CDS YP_005770187.1 384896198 12348142 complement(1087502..1088533) 1 NC_017360.1 hypothetical protein 1088533 12348142 HMPREF4655_21102 Helicobacter pylori 35A hypothetical protein YP_005770187.1 1087502 R 585535 CDS YP_005770188.1 384896199 12348143 complement(1088540..1090861) 1 NC_017360.1 COG: COG0187; Pfam: PF02518, PF00204, PF01751, PF00986; InterPro: IPR011557; DNA topoisomerase subunit B 1090861 gyrB 12348143 gyrB Helicobacter pylori 35A DNA topoisomerase subunit B YP_005770188.1 1088540 R 585535 CDS YP_005770189.1 384896200 12348144 complement(1090873..1091997) 1 NC_017360.1 COG: COG0592; Pfam: PF00712, PF02767, PF02768; InterPro: IPR001001; DNA-directed DNA polymerase III subunit beta 1091997 dnaN 12348144 dnaN Helicobacter pylori 35A DNA-directed DNA polymerase III subunit beta YP_005770189.1 1090873 R 585535 CDS YP_005770190.1 384896201 12348145 complement(1092055..1093122) 1 NC_017360.1 COG: COG2829; Pfam: PF02253; InterPro: IPR003187; phospholipase A1 1093122 pldA 12348145 pldA Helicobacter pylori 35A phospholipase A1 YP_005770190.1 1092055 R 585535 CDS YP_005770191.1 384896202 12348146 complement(1093137..1094465) 1 NC_017360.1 COG: COG0733; Pfam: PF00209; InterPro: IPR000175; NSS family amino acid:sodium (Na+) symporter 1094465 12348146 HMPREF4655_21106 Helicobacter pylori 35A NSS family amino acid:sodium (Na+) symporter YP_005770191.1 1093137 R 585535 CDS YP_005770192.1 384896203 12348147 complement(1094478..1095806) 1 NC_017360.1 COG: COG0733; Pfam: PF00209; InterPro: IPR000175; NSS family amino acid:sodium (Na+) symporter 1095806 12348147 HMPREF4655_21107 Helicobacter pylori 35A NSS family amino acid:sodium (Na+) symporter YP_005770192.1 1094478 R 585535 CDS YP_005770193.1 384896204 12348148 1096036..1096437 1 NC_017360.1 COG: COG0824; Pfam: PF03061; InterPro: IPR006684; thioesterase 1096437 12348148 HMPREF4655_21108 Helicobacter pylori 35A thioesterase YP_005770193.1 1096036 D 585535 CDS YP_005770194.1 384896205 12348149 1096427..1096687 1 NC_017360.1 hypothetical protein 1096687 12348149 HMPREF4655_21109 Helicobacter pylori 35A hypothetical protein YP_005770194.1 1096427 D 585535 CDS YP_005770195.1 384896206 12348150 complement(1096684..1097952) 1 NC_017360.1 COG: COG0771; Pfam: PF08245, PF02875; InterPro: IPR005762; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 1097952 murD 12348150 murD Helicobacter pylori 35A UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase YP_005770195.1 1096684 R 585535 CDS YP_005770196.1 384896207 12348151 complement(1097954..1099093) 1 NC_017360.1 COG: COG0472; Pfam: PF00953; InterPro: IPR003524; phospho-N-acetylmuramoyl-pentapeptide- transferase 1099093 mraY 12348151 mraY Helicobacter pylori 35A phospho-N-acetylmuramoyl-pentapeptide- transferase YP_005770196.1 1097954 R 585535 CDS YP_005770197.1 384896208 12348152 1099140..1099982 1 NC_017360.1 Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin 1099982 hpaA 12348152 hpaA Helicobacter pylori 35A neuraminyllactose-binding hemagglutinin YP_005770197.1 1099140 D 585535 CDS YP_005770198.1 384896209 12348153 1100082..1100270 1 NC_017360.1 Pfam: PF00830; InterPro: IPR001383; 50S ribosomal protein L28 1100270 rpmB 12348153 rpmB Helicobacter pylori 35A 50S ribosomal protein L28 YP_005770198.1 1100082 D 585535 CDS YP_005770199.1 384896210 12348154 1100415..1101557 1 NC_017360.1 COG: COG1226; Pfam: PF02254, PF02080; InterPro: IPR016040; potassium channel protein 1101557 12348154 HMPREF4655_21114 Helicobacter pylori 35A potassium channel protein YP_005770199.1 1100415 D 585535 CDS YP_005770200.1 384896211 12348155 complement(1101559..1101954) 1 NC_017360.1 hypothetical protein 1101954 12348155 HMPREF4655_21115 Helicobacter pylori 35A hypothetical protein YP_005770200.1 1101559 R 585535 CDS YP_005770201.1 384896212 12348156 complement(1102043..1103716) 1 NC_017360.1 hypothetical protein 1103716 12348156 HMPREF4655_21116 Helicobacter pylori 35A hypothetical protein YP_005770201.1 1102043 R 585535 CDS YP_005770202.1 384896213 12348157 complement(1104022..1104429) 1 NC_017360.1 hypothetical protein 1104429 12348157 HMPREF4655_21117 Helicobacter pylori 35A hypothetical protein YP_005770202.1 1104022 R 585535 CDS YP_005770203.1 384896214 12348158 complement(1104481..1105032) 1 NC_017360.1 COG: COG0632; Pfam: PF01330, PF07499; InterPro: IPR000085; crossover junction ATP-dependent DNA helicase RuvA 1105032 ruvA 12348158 ruvA Helicobacter pylori 35A crossover junction ATP-dependent DNA helicase RuvA YP_005770203.1 1104481 R 585535 CDS YP_005770204.1 384896215 12348159 complement(1105056..1106900) 1 NC_017360.1 hypothetical protein 1106900 12348159 HMPREF4655_21119 Helicobacter pylori 35A hypothetical protein YP_005770204.1 1105056 R 585535 CDS YP_005770205.1 384896216 12348160 1106993..1108453 1 NC_017360.1 COG: COG0728; Pfam: PF03023; InterPro: IPR004268; integral membrane protein MviN 1108453 mviN 12348160 mviN Helicobacter pylori 35A integral membrane protein MviN YP_005770205.1 1106993 D 585535 CDS YP_005770206.1 384896217 12348161 1108454..1109851 1 NC_017360.1 COG: COG0215; Pfam: PF01406; InterPro: IPR002308; cysteine--tRNA ligase 1109851 cysS 12348161 cysS Helicobacter pylori 35A cysteine--tRNA ligase YP_005770206.1 1108454 D 585535 CDS YP_005770207.1 384896218 12348162 1110050..1113925 1 NC_017360.1 COG: COG5651; Pfam: PF02691, PF03797; InterPro: IPR003842; vacuolating cytotoxin 1113925 12348162 HMPREF4655_21122 Helicobacter pylori 35A vacuolating cytotoxin YP_005770207.1 1110050 D 585535 CDS YP_005770208.1 384896219 12348163 complement(1113984..1114751) 1 NC_017360.1 COG: COG1120; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC protein 1114751 12348163 HMPREF4655_21123 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005770208.1 1113984 R 585535 CDS YP_005770209.1 384896220 12348164 complement(1114751..1115731) 1 NC_017360.1 COG: COG0609; Pfam: PF01032; InterPro: IPR000522; Fe3+ ABC superfamily ATP binding cassette transporter, membrane protein 1115731 fecD 12348164 fecD Helicobacter pylori 35A Fe3+ ABC superfamily ATP binding cassette transporter, membrane protein YP_005770209.1 1114751 R 585535 CDS YP_005770210.1 384896221 12348165 complement(1115724..1116572) 1 NC_017360.1 COG: COG1028; Pfam: PF00106; InterPro: IPR016040; short chain dehydrogenase 1116572 12348165 HMPREF4655_21125 Helicobacter pylori 35A short chain dehydrogenase YP_005770210.1 1115724 R 585535 CDS YP_005770211.1 384896222 12348166 1116712..1117236 1 NC_017360.1 COG: COG1607; Pfam: PF03061; InterPro: IPR006683; VdlD protein 1117236 12348166 HMPREF4655_21126 Helicobacter pylori 35A VdlD protein YP_005770211.1 1116712 D 585535 CDS YP_005770212.1 384896223 12348167 complement(1117331..1117597) 1 NC_017360.1 COG: COG3041; Pfam: PF05016; InterPro: IPR004386; addiction module toxin RelE 1117597 12348167 HMPREF4655_21127 Helicobacter pylori 35A addiction module toxin RelE YP_005770212.1 1117331 R 585535 CDS YP_005770213.1 384896224 12348168 complement(1117578..1117955) 1 NC_017360.1 hypothetical protein 1117955 12348168 HMPREF4655_21128 Helicobacter pylori 35A hypothetical protein YP_005770213.1 1117578 R 585535 CDS YP_005770214.1 384896225 12348169 complement(1118547..1120781) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1120781 12348169 HMPREF4655_21129 Helicobacter pylori 35A outer membrane protein YP_005770214.1 1118547 R 585535 CDS YP_005770215.1 384896226 12348170 complement(1120778..1120984) 1 NC_017360.1 hypothetical protein 1120984 12348170 HMPREF4655_21130 Helicobacter pylori 35A hypothetical protein YP_005770215.1 1120778 R 585535 CDS YP_005770216.1 384896227 12348173 1121302..1121823 1 NC_017360.1 hypothetical protein 1121823 12348173 HMPREF4655_21131 Helicobacter pylori 35A hypothetical protein YP_005770216.1 1121302 D 585535 CDS YP_005770217.1 384896228 12348174 complement(1121774..1122886) 1 NC_017360.1 COG: COG0409; Pfam: PF01924; InterPro: IPR002780; hydrogenase expression/formation protein HypD 1122886 hypD 12348174 hypD Helicobacter pylori 35A hydrogenase expression/formation protein HypD YP_005770217.1 1121774 R 585535 CDS YP_005770218.1 384896229 12348175 complement(1122914..1123150) 1 NC_017360.1 COG: COG0298; Pfam: PF01455; InterPro: IPR001109; hydrogenase assembly chaperone HypC/HupF 1123150 hypC 12348175 hypC Helicobacter pylori 35A hydrogenase assembly chaperone HypC/HupF YP_005770218.1 1122914 R 585535 CDS YP_005770219.1 384896230 12348176 complement(1123150..1123878) 1 NC_017360.1 COG: COG0378; Pfam: PF02492; InterPro: IPR004392; hydrogenase nickel incorporation protein HypB 1123878 hypB 12348176 hypB Helicobacter pylori 35A hydrogenase nickel incorporation protein HypB YP_005770219.1 1123150 R 585535 CDS YP_005770220.1 384896231 12348177 complement(1123994..1124116) 1 NC_017360.1 hypothetical protein 1124116 12348177 HMPREF4655_21135 Helicobacter pylori 35A hypothetical protein YP_005770220.1 1123994 R 585535 CDS YP_005770221.1 384896232 12348178 complement(1124127..1124426) 1 NC_017360.1 COG: COG1917; hypothetical protein 1124426 12348178 HMPREF4655_21136 Helicobacter pylori 35A hypothetical protein YP_005770221.1 1124127 R 585535 CDS YP_005770222.1 384896233 12348179 complement(1124437..1125642) 1 NC_017360.1 COG: COG0282; Pfam: PF00871; InterPro: IPR004372; acetate kinase 1125642 ackA 12348179 ackA Helicobacter pylori 35A acetate kinase YP_005770222.1 1124437 R 585535 CDS YP_005770223.1 384896234 12348180 complement(1125660..1127237) 1 NC_017360.1 COG: COG0280; Pfam: PF01515; InterPro: IPR002505; phosphate acetyltransferase 1127237 pta 12348180 pta Helicobacter pylori 35A phosphate acetyltransferase YP_005770223.1 1125660 R 585535 CDS YP_005770224.1 384896235 12348181 1127469..1129031 1 NC_017360.1 Pfam: PF02120; hypothetical protein 1129031 12348181 HMPREF4655_21139 Helicobacter pylori 35A hypothetical protein YP_005770224.1 1127469 D 585535 CDS YP_005770225.1 384896236 12348182 1129082..1130032 1 NC_017360.1 COG: COG1843; Pfam: PF03963; InterPro: IPR005648; hook assembly protein 1130032 flgD 12348182 flgD Helicobacter pylori 35A hook assembly protein YP_005770225.1 1129082 D 585535 CDS YP_005770226.1 384896237 12348183 1130029..1131846 1 NC_017360.1 COG: COG1749; Pfam: PF00460, PF07559, PF06429; InterPro: IPR011491; flagellar hook protein 1131846 flgE2 12348183 flgE2 Helicobacter pylori 35A flagellar hook protein YP_005770226.1 1130029 D 585535 CDS YP_005770227.1 384896238 12348184 1131898..1132527 1 NC_017360.1 restriction endonuclease 1132527 12348184 HMPREF4655_21142 Helicobacter pylori 35A restriction endonuclease YP_005770227.1 1131898 D 585535 CDS YP_005770228.1 384896239 12348185 1132496..1133656 1 NC_017360.1 COG: COG0827; Pfam: PF07669; adenine specific DNA methyltransferase 1133656 hinDIIM 12348185 hinDIIM Helicobacter pylori 35A adenine specific DNA methyltransferase YP_005770228.1 1132496 D 585535 CDS YP_005770229.1 384896240 12348186 1133650..1135680 1 NC_017360.1 COG: COG0210; Pfam: PF00580; InterPro: IPR000212; rep helicase, single-stranded DNA-dependent ATPase 1135680 12348186 HMPREF4655_21144 Helicobacter pylori 35A rep helicase, single-stranded DNA-dependent ATPase YP_005770229.1 1133650 D 585535 CDS YP_005770230.1 384896241 12348187 complement(1135981..1136100) 1 NC_017360.1 hypothetical protein 1136100 12348187 HMPREF4655_21145 Helicobacter pylori 35A hypothetical protein YP_005770230.1 1135981 R 585535 CDS YP_005770231.1 384896242 12348188 1136223..1137776 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HopC 1137776 hopC 12348188 hopC Helicobacter pylori 35A outer membrane protein HopC YP_005770231.1 1136223 D 585535 CDS YP_005770232.1 384896243 12348189 1137798..1139387 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1139387 12348189 HMPREF4655_21147 Helicobacter pylori 35A outer membrane protein YP_005770232.1 1137798 D 585535 CDS YP_005770233.1 384896244 12348190 complement(1139928..1141541) 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 1141541 hofG 12348190 hofG Helicobacter pylori 35A hof-family outer membrane protein YP_005770233.1 1139928 R 585535 CDS YP_005770234.1 384896245 12348191 complement(1141712..1143901) 1 NC_017360.1 COG: COG1629; Pfam: PF07715, PF00593; InterPro: IPR000531; iron-regulated outer membrane protein 1143901 frpB3 12348191 frpB3 Helicobacter pylori 35A iron-regulated outer membrane protein YP_005770234.1 1141712 R 585535 CDS YP_005770235.1 384896246 12348192 complement(1144003..1144149) 1 NC_017360.1 hypothetical protein 1144149 12348192 HMPREF4655_21150 Helicobacter pylori 35A hypothetical protein YP_005770235.1 1144003 R 585535 CDS YP_005770236.1 384896247 12348193 complement(1144324..1144755) 1 NC_017360.1 hypothetical protein 1144755 12348193 HMPREF4655_21151 Helicobacter pylori 35A hypothetical protein YP_005770236.1 1144324 R 585535 CDS YP_005770237.1 384896248 12348194 complement(1144760..1148017) 1 NC_017360.1 COG: COG0458; Pfam: PF00289, PF02786, PF02787, PF02142; InterPro: IPR006275; carbamoyl-phosphate synthase large subunit 1148017 carB 12348194 carB Helicobacter pylori 35A carbamoyl-phosphate synthase large subunit YP_005770237.1 1144760 R 585535 CDS YP_005770238.1 384896249 12348195 complement(1148114..1148806) 1 NC_017360.1 COG: COG0670; Pfam: PF01027; InterPro: IPR006214; TEGT family testis enhanced gene transfer transporter 1148806 12348195 HMPREF4655_21153 Helicobacter pylori 35A TEGT family testis enhanced gene transfer transporter YP_005770238.1 1148114 R 585535 CDS YP_005770239.1 384896250 12348196 1148941..1149945 1 NC_017360.1 COG: COG0057; Pfam: PF00044, PF02800; InterPro: IPR000173; glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) 1149945 gapA 12348196 gapA Helicobacter pylori 35A glyceraldehyde-3-phosphate dehydrogenase (phosphorylating) YP_005770239.1 1148941 D 585535 CDS YP_005770240.1 384896251 12348197 1150025..1157173 1 NC_017360.1 COG: COG5651; Pfam: PF03077, PF02691, PF03797; InterPro: IPR005546; vacuolating cytotoxin VacA family protein 1157173 vacA2 12348197 vacA2 Helicobacter pylori 35A vacuolating cytotoxin VacA family protein YP_005770240.1 1150025 D 585535 CDS YP_005770241.1 384896252 12348198 1157225..1158325 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1158325 12348198 HMPREF4655_21156 Helicobacter pylori 35A outer membrane protein YP_005770241.1 1157225 D 585535 CDS YP_005770242.1 384896253 12348199 complement(1158378..1158584) 1 NC_017360.1 COG: COG1942; Pfam: PF01361; InterPro: IPR004370; 4-oxalocrotonate tautomerase 1158584 12348199 HMPREF4655_21157 Helicobacter pylori 35A 4-oxalocrotonate tautomerase YP_005770242.1 1158378 R 585535 CDS YP_005770243.1 384896254 12348200 1158730..1159311 1 NC_017360.1 COG: COG0353; Pfam: PF02132; InterPro: IPR000093; recombination protein R 1159311 recR 12348200 recR Helicobacter pylori 35A recombination protein R YP_005770243.1 1158730 D 585535 CDS YP_005770244.1 384896255 12348201 1159308..1160453 1 NC_017360.1 COG: COG0585; Pfam: PF01142; InterPro: IPR001656; tRNA pseudouridine synthase D 1160453 truD 12348201 truD Helicobacter pylori 35A tRNA pseudouridine synthase D YP_005770244.1 1159308 D 585535 CDS YP_005770245.1 384896256 12348202 1160422..1161372 1 NC_017360.1 COG: COG0501; Pfam: PF01435; InterPro: IPR001915; heat shock protein HtpX 1161372 htpX 12348202 htpX Helicobacter pylori 35A heat shock protein HtpX YP_005770245.1 1160422 D 585535 CDS YP_005770246.1 384896257 12348203 1161373..1161915 1 NC_017360.1 COG: COG0302; Pfam: PF01227; InterPro: IPR001474; GTP cyclohydrolase I 1161915 folE 12348203 folE Helicobacter pylori 35A GTP cyclohydrolase I YP_005770246.1 1161373 D 585535 CDS YP_005770247.1 384896258 12348204 1161931..1162842 1 NC_017360.1 COG: COG0142; Pfam: PF00348; InterPro: IPR008949; geranyltranstransferase 1162842 ispA 12348204 ispA Helicobacter pylori 35A geranyltranstransferase YP_005770247.1 1161931 D 585535 CDS YP_005770248.1 384896259 12348205 1162839..1163642 1 NC_017360.1 COG: COG0496; Pfam: PF01975; InterPro: IPR002828; 5'-nucleotidase 1163642 surE 12348205 surE Helicobacter pylori 35A 5'-nucleotidase YP_005770248.1 1162839 D 585535 CDS YP_005770249.1 384896260 12348206 1163639..1164298 1 NC_017360.1 hypothetical protein 1164298 12348206 HMPREF4655_21164 Helicobacter pylori 35A hypothetical protein YP_005770249.1 1163639 D 585535 CDS YP_005770250.1 384896261 12348207 1164302..1164904 1 NC_017360.1 COG: COG0720; 6-pyruvoyl-tetrahydropterin synthase 1164904 ptpS 12348207 ptpS Helicobacter pylori 35A 6-pyruvoyl-tetrahydropterin synthase YP_005770250.1 1164302 D 585535 CDS YP_005770251.1 384896262 12348208 1164901..1165656 1 NC_017360.1 COG: COG0602; Pfam: PF04055; radical SAM domain-containing protein 1165656 12348208 HMPREF4655_21166 Helicobacter pylori 35A radical SAM domain-containing protein YP_005770251.1 1164901 D 585535 CDS YP_005770252.1 384896263 12348209 1165667..1166152 1 NC_017360.1 COG: COG0454; Pfam: PF00583; InterPro: IPR016181; GNAT family acetyltransferase 1166152 12348209 HMPREF4655_21167 Helicobacter pylori 35A GNAT family acetyltransferase YP_005770252.1 1165667 D 585535 CDS YP_005770253.1 384896264 12348210 1166371..1168356 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomB 1168356 homB 12348210 homB Helicobacter pylori 35A outer membrane protein HomB YP_005770253.1 1166371 D 585535 CDS YP_005770254.1 384896265 12348211 complement(1168489..1169886) 1 NC_017360.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; proline/betaine transporter 1169886 proP 12348211 proP Helicobacter pylori 35A proline/betaine transporter YP_005770254.1 1168489 R 585535 CDS YP_005770255.1 384896266 12348212 complement(1170134..1171834) 1 NC_017360.1 COG: COG1479; Pfam: PF03235; InterPro: IPR004919; hypothetical protein 1171834 12348212 HMPREF4655_21170 Helicobacter pylori 35A hypothetical protein YP_005770255.1 1170134 R 585535 CDS YP_005770256.1 384896267 12348213 complement(1171902..1172624) 1 NC_017360.1 COG: COG0765; Pfam: PF00528; InterPro: IPR000515; amino acid ABC superfamily ATP binding cassette transporter, membrane protein 1172624 tcyB 12348213 tcyB Helicobacter pylori 35A amino acid ABC superfamily ATP binding cassette transporter, membrane protein YP_005770256.1 1171902 R 585535 CDS YP_005770257.1 384896268 12348214 complement(1172599..1173375) 1 NC_017360.1 COG: COG0834; Pfam: PF00497; InterPro: IPR001638; amino acid ABC superfamily ATP binding cassette transporter, binding protein 1173375 tcyA 12348214 tcyA Helicobacter pylori 35A amino acid ABC superfamily ATP binding cassette transporter, binding protein YP_005770257.1 1172599 R 585535 CDS YP_005770258.1 384896269 12348215 complement(1173446..1174579) 1 NC_017360.1 COG: COG0787; Pfam: PF01168, PF00842; InterPro: IPR000821; alanine racemase 1174579 alr 12348215 alr Helicobacter pylori 35A alanine racemase YP_005770258.1 1173446 R 585535 CDS YP_005770259.1 384896270 12348216 complement(1174586..1175938) 1 NC_017360.1 COG: COG1115; Pfam: PF01235; InterPro: IPR001463; AGCS family alanine/glycine:sodium (Na+) symporter 1175938 agcS 12348216 agcS Helicobacter pylori 35A AGCS family alanine/glycine:sodium (Na+) symporter YP_005770259.1 1174586 R 585535 CDS YP_005770260.1 384896271 12348217 complement(1175979..1177211) 1 NC_017360.1 COG: COG0665; Pfam: PF01266; InterPro: IPR006076; D-amino-acid dehydrogenase 1177211 dadA 12348217 dadA Helicobacter pylori 35A D-amino-acid dehydrogenase YP_005770260.1 1175979 R 585535 CDS YP_005770261.1 384896272 12348218 complement(1177233..1177610) 1 NC_017360.1 COG: COG0251; Pfam: PF01042; InterPro: IPR013813; endoribonuclease L-PSP 1177610 12348218 HMPREF4655_21176 Helicobacter pylori 35A endoribonuclease L-PSP YP_005770261.1 1177233 R 585535 CDS YP_005770262.1 384896273 12348220 1178034..1178333 1 NC_017360.1 Trl protein 1178333 12348220 HMPREF4655_21177 Helicobacter pylori 35A Trl protein YP_005770262.1 1178034 D 585535 CDS YP_005770263.1 384896274 12348224 1178892..1180382 1 NC_017360.1 COG: COG1757; Pfam: PF03553; InterPro: IPR004770; NhaC family sodium:proton (Na+:H+) antiporter 1180382 12348224 HMPREF4655_21178 Helicobacter pylori 35A NhaC family sodium:proton (Na+:H+) antiporter YP_005770263.1 1178892 D 585535 CDS YP_005770264.1 384896275 12348225 1180700..1181059 1 NC_017360.1 hypothetical protein 1181059 12348225 HMPREF4655_21179 Helicobacter pylori 35A hypothetical protein YP_005770264.1 1180700 D 585535 CDS YP_005770265.1 384896276 12348226 complement(1181064..1181210) 1 NC_017360.1 hypothetical protein 1181210 12348226 HMPREF4655_21180 Helicobacter pylori 35A hypothetical protein YP_005770265.1 1181064 R 585535 CDS YP_005770266.1 384896277 12348227 complement(1181887..1182900) 1 NC_017360.1 hypothetical protein 1182900 12348227 HMPREF4655_21181 Helicobacter pylori 35A hypothetical protein YP_005770266.1 1181887 R 585535 CDS YP_005770267.1 384896278 12348228 complement(1182910..1183362) 1 NC_017360.1 COG: COG1576; Pfam: PF02590; InterPro: IPR003742; SPOUT methyltransferase superfamily protein 1183362 12348228 HMPREF4655_21182 Helicobacter pylori 35A SPOUT methyltransferase superfamily protein YP_005770267.1 1182910 R 585535 CDS YP_005770268.1 384896279 12348229 complement(1183376..1184245) 1 NC_017360.1 COG: COG0777; Pfam: PF01039; InterPro: IPR000438; acetyl-coA carboxylase carboxyl transferase subunit beta 1184245 accD 12348229 accD Helicobacter pylori 35A acetyl-coA carboxylase carboxyl transferase subunit beta YP_005770268.1 1183376 R 585535 CDS YP_005770269.1 384896280 12348230 1184326..1184940 1 NC_017360.1 hypothetical protein 1184940 12348230 HMPREF4655_21184 Helicobacter pylori 35A hypothetical protein YP_005770269.1 1184326 D 585535 CDS YP_005770270.1 384896281 12348231 1184951..1185607 1 NC_017360.1 COG: COG1546; Pfam: PF02464; InterPro: IPR008136; hypothetical protein 1185607 12348231 HMPREF4655_21185 Helicobacter pylori 35A hypothetical protein YP_005770270.1 1184951 D 585535 CDS YP_005770271.1 384896282 12348232 complement(1185610..1186176) 1 NC_017360.1 hypothetical protein 1186176 12348232 HMPREF4655_21186 Helicobacter pylori 35A hypothetical protein YP_005770271.1 1185610 R 585535 CDS YP_005770272.1 384896283 12348233 complement(1186241..1186873) 1 NC_017360.1 Pfam: PF00881; InterPro: IPR000415; oxygen-insensitive NADPH nitroreductase 1186873 12348233 HMPREF4655_21187 Helicobacter pylori 35A oxygen-insensitive NADPH nitroreductase YP_005770272.1 1186241 R 585535 CDS YP_005770273.1 384896284 12348234 complement(1186870..1187724) 1 NC_017360.1 COG: COG0682; Pfam: PF01790; InterPro: IPR001640; prolipoprotein diacylglyceryl transferase 1187724 lgt 12348234 lgt Helicobacter pylori 35A prolipoprotein diacylglyceryl transferase YP_005770273.1 1186870 R 585535 CDS YP_005770274.1 384896285 12348235 complement(1187734..1188462) 1 NC_017360.1 COG: COG0564; Pfam: PF00849; InterPro: IPR006145; ribosomal large subunit pseudouridine synthase C 1188462 rluC 12348235 rluC Helicobacter pylori 35A ribosomal large subunit pseudouridine synthase C YP_005770274.1 1187734 R 585535 CDS YP_005770275.1 384896286 12348236 complement(1188476..1189657) 1 NC_017360.1 COG: COG1519; Pfam: PF04413; InterPro: IPR007507; 3-deoxy-D-manno-octulosonic-acid transferase 1189657 waaA 12348236 waaA Helicobacter pylori 35A 3-deoxy-D-manno-octulosonic-acid transferase YP_005770275.1 1188476 R 585535 CDS YP_005770276.1 384896287 12348237 complement(1189658..1190422) 1 NC_017360.1 COG: COG1579; Pfam: PF02591; InterPro: IPR003743; hypothetical protein 1190422 12348237 HMPREF4655_21191 Helicobacter pylori 35A hypothetical protein YP_005770276.1 1189658 R 585535 CDS YP_005770277.1 384896288 12348238 complement(1190432..1191163) 1 NC_017360.1 COG: COG0327; Pfam: PF01784; InterPro: IPR002678; hypothetical protein 1191163 12348238 HMPREF4655_21192 Helicobacter pylori 35A hypothetical protein YP_005770277.1 1190432 R 585535 CDS YP_005770278.1 384896289 12348239 complement(1191165..1192061) 1 NC_017360.1 COG: COG0752; Pfam: PF02091; InterPro: IPR002310; glycyl-tRNA synthetase subunit alpha 1192061 glyQ 12348239 glyQ Helicobacter pylori 35A glycyl-tRNA synthetase subunit alpha YP_005770278.1 1191165 R 585535 CDS YP_005770279.1 384896290 12348240 complement(1192076..1193050) 1 NC_017360.1 COG: COG0240; Pfam: PF01210, PF07479; InterPro: IPR006168; glycerol-3-phosphate dehydrogenase (NAD(P)(+)) 1193050 gpsA 12348240 gpsA Helicobacter pylori 35A glycerol-3-phosphate dehydrogenase (NAD(P)(+)) YP_005770279.1 1192076 R 585535 CDS YP_005770280.1 384896291 12348244 complement(1199343..1199660) 1 NC_017360.1 hypothetical protein 1199660 12348244 HMPREF4655_21202 Helicobacter pylori 35A hypothetical protein YP_005770280.1 1199343 R 585535 CDS YP_005770281.1 384896292 12348245 complement(1199635..1202694) 1 NC_017360.1 COG: COG3696; Pfam: PF00873; InterPro: IPR004763; CzcA family heavy metal efflux pump 1202694 czcA 12348245 czcA Helicobacter pylori 35A CzcA family heavy metal efflux pump YP_005770281.1 1199635 R 585535 CDS YP_005770282.1 384896293 12348246 complement(1202694..1203749) 1 NC_017360.1 COG: COG0845; nickel-cobalt-cadmium resistance protein 1203749 nccB 12348246 nccB Helicobacter pylori 35A nickel-cobalt-cadmium resistance protein YP_005770282.1 1202694 R 585535 CDS YP_005770283.1 384896294 12348247 complement(1203770..1205065) 1 NC_017360.1 Pfam: PF02321; InterPro: IPR003423; nickel cobalt outer membrane efflux protein 1205065 12348247 HMPREF4655_21205 Helicobacter pylori 35A nickel cobalt outer membrane efflux protein YP_005770283.1 1203770 R 585535 CDS YP_005770284.1 384896295 12348248 complement(1205055..1207157) 1 NC_017360.1 COG: COG0751; Pfam: PF02092; InterPro: IPR015944; glycyl-tRNA synthetase subunit beta 1207157 glyS 12348248 glyS Helicobacter pylori 35A glycyl-tRNA synthetase subunit beta YP_005770284.1 1205055 R 585535 CDS YP_005770285.1 384896296 12348249 1207269..1208327 1 NC_017360.1 hypothetical protein 1208327 12348249 HMPREF4655_21207 Helicobacter pylori 35A hypothetical protein YP_005770285.1 1207269 D 585535 CDS YP_005770286.1 384896297 12348250 1208340..1209815 1 NC_017360.1 COG: COG0696; Pfam: PF06415, PF01676; InterPro: IPR005995; phosphoglycerate mutase 1209815 gpmI 12348250 gpmI Helicobacter pylori 35A phosphoglycerate mutase YP_005770286.1 1208340 D 585535 CDS YP_005770287.1 384896298 12348251 1209830..1210111 1 NC_017360.1 COG: COG0721; Pfam: PF02686; InterPro: IPR003837; glutamyl-tRNA(Gln) amidotransferase subunit C 1210111 gatC 12348251 gatC Helicobacter pylori 35A glutamyl-tRNA(Gln) amidotransferase subunit C YP_005770287.1 1209830 D 585535 CDS YP_005770288.1 384896299 12348252 complement(1210184..1211494) 1 NC_017360.1 COG: COG0161; Pfam: PF00202; InterPro: IPR005815; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1211494 bioA 12348252 bioA Helicobacter pylori 35A adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_005770288.1 1210184 R 585535 CDS YP_005770289.1 384896300 12348253 1211534..1213087 1 NC_017360.1 COG: COG0760; peptidyl-prolyl cis-trans isomerase 1213087 12348253 HMPREF4655_21211 Helicobacter pylori 35A peptidyl-prolyl cis-trans isomerase YP_005770289.1 1211534 D 585535 CDS YP_005770290.1 384896301 12348254 1213087..1214583 1 NC_017360.1 COG: COG0849; Pfam: PF02491; InterPro: IPR003494; cell division protein FtsA 1214583 ftsA 12348254 ftsA Helicobacter pylori 35A cell division protein FtsA YP_005770290.1 1213087 D 585535 CDS YP_005770291.1 384896302 12348255 1214717..1215874 1 NC_017360.1 COG: COG0206; Pfam: PF00091, PF03953; InterPro: IPR000158; cell division protein FtsZ 1215874 ftsZ 12348255 ftsZ Helicobacter pylori 35A cell division protein FtsZ YP_005770291.1 1214717 D 585535 CDS YP_005770292.1 384896303 12348256 complement(1216251..1216412) 1 NC_017360.1 hypothetical protein 1216412 12348256 HMPREF4655_21214 Helicobacter pylori 35A hypothetical protein YP_005770292.1 1216251 R 585535 CDS YP_005770293.1 384896304 12348257 complement(1216808..1217632) 1 NC_017360.1 COG: COG0668; Pfam: PF00924; InterPro: IPR006685; MscS family small conductance mechanosenstive ion channel 1217632 12348257 HMPREF4655_21215 Helicobacter pylori 35A MscS family small conductance mechanosenstive ion channel YP_005770293.1 1216808 R 585535 CDS YP_005770294.1 384896305 12348258 complement(1217625..1217825) 1 NC_017360.1 hypothetical protein 1217825 12348258 HMPREF4655_21216 Helicobacter pylori 35A hypothetical protein YP_005770294.1 1217625 R 585535 CDS YP_005770295.1 384896306 12348262 complement(1221773..1221925) 1 NC_017360.1 hypothetical protein 1221925 12348262 HMPREF4655_21217 Helicobacter pylori 35A hypothetical protein YP_005770295.1 1221773 R 585535 CDS YP_005770296.1 384896307 12348263 1222140..1222490 1 NC_017360.1 hypothetical protein 1222490 12348263 HMPREF4655_21218 Helicobacter pylori 35A hypothetical protein YP_005770296.1 1222140 D 585535 CDS YP_005770297.1 384896308 12348265 1224600..1225391 1 NC_017360.1 HP0423 family protein 1225391 12348265 HMPREF4655_21221 Helicobacter pylori 35A HP0423 family protein YP_005770297.1 1224600 D 585535 CDS YP_005770298.1 384896309 12348266 complement(1225541..1227388) 1 NC_017360.1 COG: COG1166; Pfam: PF02784, PF00278; InterPro: IPR002985; arginine 2-monooxygenase 1227388 speA 12348266 speA Helicobacter pylori 35A arginine 2-monooxygenase YP_005770298.1 1225541 R 585535 CDS YP_005770299.1 384896310 12348267 complement(1227403..1228572) 1 NC_017360.1 COG: COG0438; Pfam: PF00534; InterPro: IPR001296; type 1 capsular polysaccharide biosynthesis protein J 1228572 capJ 12348267 capJ Helicobacter pylori 35A type 1 capsular polysaccharide biosynthesis protein J YP_005770299.1 1227403 R 585535 CDS YP_005770300.1 384896311 12348268 complement(1228577..1229005) 1 NC_017360.1 COG: COG2050; Pfam: PF03061; InterPro: IPR006683; hypothetical protein 1229005 12348268 HMPREF4655_21224 Helicobacter pylori 35A hypothetical protein YP_005770300.1 1228577 R 585535 CDS YP_005770301.1 384896312 12348269 complement(1229023..1229808) 1 NC_017360.1 COG: COG0500; Pfam: PF08003; InterPro: IPR010017; S-adenosylmethionine-dependent methyltransferase 1229808 12348269 HMPREF4655_21225 Helicobacter pylori 35A S-adenosylmethionine-dependent methyltransferase YP_005770301.1 1229023 R 585535 CDS YP_005770302.1 384896313 12348270 complement(1229812..1230819) 1 NC_017360.1 hypothetical protein 1230819 12348270 HMPREF4655_21226 Helicobacter pylori 35A hypothetical protein YP_005770302.1 1229812 R 585535 CDS YP_005770303.1 384896314 12348271 complement(1230820..1232772) 1 NC_017360.1 COG: COG0143; Pfam: PF09334, PF01588; InterPro: IPR002304; methionine--tRNA ligase 1232772 metG 12348271 metG Helicobacter pylori 35A methionine--tRNA ligase YP_005770303.1 1230820 R 585535 CDS YP_005770304.1 384896315 12348272 1232941..1234110 1 NC_017360.1 COG: COG2230; Pfam: PF02353; InterPro: IPR003333; cyclopropane-fatty-acyl-phospholipid synthase 1234110 cfa 12348272 cfa Helicobacter pylori 35A cyclopropane-fatty-acyl-phospholipid synthase YP_005770304.1 1232941 D 585535 CDS YP_005770305.1 384896316 12348273 complement(1234113..1235996) 1 NC_017360.1 COG: COG0668; Pfam: PF00924; InterPro: IPR006685; hypothetical protein 1235996 12348273 HMPREF4655_21229 Helicobacter pylori 35A hypothetical protein YP_005770305.1 1234113 R 585535 CDS YP_005770306.1 384896317 12348274 complement(1236271..1236408) 1 NC_017360.1 DnaK suppressor protein 1236408 dksA 12348274 dksA Helicobacter pylori 35A DnaK suppressor protein YP_005770306.1 1236271 R 585535 CDS YP_005770307.1 384896318 12348279 complement(1237166..1237915) 1 NC_017360.1 Pfam: PF05211; InterPro: IPR007876; neuraminyllactose-binding hemagglutinin family protein (hpaA) 1237915 hpaA2 12348279 hpaA2 Helicobacter pylori 35A neuraminyllactose-binding hemagglutinin family protein (hpaA) YP_005770307.1 1237166 R 585535 CDS YP_005770308.1 384896319 12348280 complement(1237996..1239522) 1 NC_017360.1 COG: COG0519; Pfam: PF00117, PF03054, PF00958; InterPro: IPR001674; GMP synthase 1239522 guaA 12348280 guaA Helicobacter pylori 35A GMP synthase YP_005770308.1 1237996 R 585535 CDS YP_005770309.1 384896320 12348281 complement(1239533..1240021) 1 NC_017360.1 hypothetical protein 1240021 12348281 HMPREF4655_21233 Helicobacter pylori 35A hypothetical protein YP_005770309.1 1239533 R 585535 CDS YP_005770310.1 384896321 12348283 complement(1242664..1243254) 1 NC_017360.1 hypothetical protein 1243254 12348283 HMPREF4655_21238 Helicobacter pylori 35A hypothetical protein YP_005770310.1 1242664 R 585535 CDS YP_005770311.1 384896322 12348284 complement(1243280..1244602) 1 NC_017360.1 COG: COG0520; Pfam: PF00266; InterPro: IPR000192; nifS family protein 1244602 12348284 HMPREF4655_21239 Helicobacter pylori 35A nifS family protein YP_005770311.1 1243280 R 585535 CDS YP_005770312.1 384896323 12348285 complement(1244621..1244935) 1 NC_017360.1 COG: COG0537; Pfam: PF01230; InterPro: IPR011151; HIT family protein 1244935 12348285 HMPREF4655_21240 Helicobacter pylori 35A HIT family protein YP_005770312.1 1244621 R 585535 CDS YP_005770313.1 384896324 12348286 1245016..1246002 1 NC_017360.1 COG: COG0016; Pfam: PF02912, PF01409; InterPro: IPR004529; phenylalanyl-tRNA synthetase subunit alpha 1246002 pheS 12348286 pheS Helicobacter pylori 35A phenylalanyl-tRNA synthetase subunit alpha YP_005770313.1 1245016 D 585535 CDS YP_005770314.1 384896325 12348287 1246002..1248296 1 NC_017360.1 COG: COG0072; Pfam: PF01588, PF03484, PF03147; InterPro: IPR004532; phenylalanyl-tRNA synthetase subunit beta 1248296 pheT 12348287 pheT Helicobacter pylori 35A phenylalanyl-tRNA synthetase subunit beta YP_005770314.1 1246002 D 585535 CDS YP_005770315.1 384896326 12348288 1248312..1249601 1 NC_017360.1 COG: COG0128; Pfam: PF00275; InterPro: IPR006264; 3-phosphoshikimate 1-carboxyvinyltransferase 1249601 aroA 12348288 aroA Helicobacter pylori 35A 3-phosphoshikimate 1-carboxyvinyltransferase YP_005770315.1 1248312 D 585535 CDS YP_005770316.1 384896327 12348289 1249591..1250415 1 NC_017360.1 COG: COG0761; Pfam: PF02401; InterPro: IPR003451; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1250415 ispH 12348289 ispH Helicobacter pylori 35A 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_005770316.1 1249591 D 585535 CDS YP_005770317.1 384896328 12348290 1250536..1252194 1 NC_017360.1 COG: COG0539; Pfam: PF00575; InterPro: IPR000110; 30S ribosomal protein S1 1252194 rpsA 12348290 rpsA Helicobacter pylori 35A 30S ribosomal protein S1 YP_005770317.1 1250536 D 585535 CDS YP_005770318.1 384896329 12348291 1252223..1252762 1 NC_017360.1 hypothetical protein 1252762 12348291 HMPREF4655_21246 Helicobacter pylori 35A hypothetical protein YP_005770318.1 1252223 D 585535 CDS YP_005770319.1 384896330 12348292 1252778..1254352 1 NC_017360.1 COG: COG0111; Pfam: PF00389, PF02826, PF01842; InterPro: IPR006236; phosphoglycerate dehydrogenase 1254352 serA 12348292 serA Helicobacter pylori 35A phosphoglycerate dehydrogenase YP_005770319.1 1252778 D 585535 CDS YP_005770320.1 384896331 12348293 1254362..1256212 1 NC_017360.1 COG: COG0043; Pfam: PF01977; InterPro: IPR002830; SCO4490 family menaquinone biosynthesis decarboxylase 1256212 12348293 HMPREF4655_21248 Helicobacter pylori 35A SCO4490 family menaquinone biosynthesis decarboxylase YP_005770320.1 1254362 D 585535 CDS YP_005770321.1 384896332 12348294 1256222..1256890 1 NC_017360.1 COG: COG0325; Pfam: PF01168; InterPro: IPR011078; YggS family pyridoxal phosphate enzyme 1256890 12348294 HMPREF4655_21249 Helicobacter pylori 35A YggS family pyridoxal phosphate enzyme YP_005770321.1 1256222 D 585535 CDS YP_005770322.1 384896333 12348295 1256892..1257650 1 NC_017360.1 COG: COG2908; Pfam: PF00149; Ser/Thr protein phosphatase 1257650 12348295 HMPREF4655_21250 Helicobacter pylori 35A Ser/Thr protein phosphatase YP_005770322.1 1256892 D 585535 CDS YP_005770323.1 384896334 12348296 1257654..1258589 1 NC_017360.1 COG: COG0835; Pfam: PF01584, PF00072; InterPro: IPR002545; chemotaxis protein CheV 1258589 cheV3 12348296 cheV3 Helicobacter pylori 35A chemotaxis protein CheV YP_005770323.1 1257654 D 585535 CDS YP_005770324.1 384896335 12348297 1258647..1261073 1 NC_017360.1 COG: COG0643; Pfam: PF01627, PF02895, PF02518, PF01584, PF00072; InterPro: IPR003594; chemotaxis histidine kinase CheA 1261073 cheA 12348297 cheA Helicobacter pylori 35A chemotaxis histidine kinase CheA YP_005770324.1 1258647 D 585535 CDS YP_005770325.1 384896336 12348298 1261070..1261567 1 NC_017360.1 COG: COG0835; Pfam: PF01584; InterPro: IPR002545; chemotaxis signal transduction protein CheW 1261567 cheW 12348298 cheW Helicobacter pylori 35A chemotaxis signal transduction protein CheW YP_005770325.1 1261070 D 585535 CDS YP_005770326.1 384896337 12348299 complement(1261817..1262317) 1 NC_017360.1 COG: COG2077; Pfam: PF08534; InterPro: IPR012335; thiol peroxidase 1262317 tpx 12348299 tpx Helicobacter pylori 35A thiol peroxidase YP_005770326.1 1261817 R 585535 CDS YP_005770327.1 384896338 12348300 1262541..1263182 1 NC_017360.1 COG: COG0605; Pfam: PF00081, PF02777; InterPro: IPR001189; superoxide dismutase 1263182 sodB 12348300 sodB Helicobacter pylori 35A superoxide dismutase YP_005770327.1 1262541 D 585535 CDS YP_005770328.1 384896339 12348301 1263234..1263953 1 NC_017360.1 COG: COG0500; Pfam: PF08241; InterPro: IPR005271; S-adenosyl-L-methionine-dependent methyltransferase 1263953 12348301 HMPREF4655_21256 Helicobacter pylori 35A S-adenosyl-L-methionine-dependent methyltransferase YP_005770328.1 1263234 D 585535 CDS YP_005770329.1 384896340 12348302 complement(1263987..1265846) 1 NC_017360.1 COG: COG1198; Pfam: PF00270, PF00271; InterPro: IPR005259; DNA replication factor Y 1265846 priA 12348302 priA Helicobacter pylori 35A DNA replication factor Y YP_005770329.1 1263987 R 585535 CDS YP_005770330.1 384896341 12348303 complement(1265831..1266067) 1 NC_017360.1 hypothetical protein 1266067 12348303 HMPREF4655_21258 Helicobacter pylori 35A hypothetical protein YP_005770330.1 1265831 R 585535 CDS YP_005770331.1 384896342 12348304 complement(1266080..1266307) 1 NC_017360.1 hypothetical protein 1266307 12348304 HMPREF4655_21259 Helicobacter pylori 35A hypothetical protein YP_005770331.1 1266080 R 585535 CDS YP_005770332.1 384896343 12348305 complement(1266352..1266471) 1 NC_017360.1 hypothetical protein 1266471 12348305 HMPREF4655_21260 Helicobacter pylori 35A hypothetical protein YP_005770332.1 1266352 R 585535 CDS YP_005770333.1 384896344 12348306 1266510..1267253 1 NC_017360.1 Pfam: PF05036; hypothetical protein 1267253 12348306 HMPREF4655_21261 Helicobacter pylori 35A hypothetical protein YP_005770333.1 1266510 D 585535 CDS YP_005770334.1 384896345 12348307 complement(1267261..1267788) 1 NC_017360.1 hypothetical protein 1267788 12348307 HMPREF4655_21262 Helicobacter pylori 35A hypothetical protein YP_005770334.1 1267261 R 585535 CDS YP_005770335.1 384896346 12348308 1267970..1269193 1 NC_017360.1 COG: COG0501; Pfam: PF01435; InterPro: IPR001915; zinc-metallo protease 1269193 yjr117W 12348308 yjr117W Helicobacter pylori 35A zinc-metallo protease YP_005770335.1 1267970 D 585535 CDS YP_005770336.1 384896347 12348309 1269190..1270020 1 NC_017360.1 COG: COG2890; Pfam: PF05175; InterPro: IPR004556; protoporphyrinogen oxidase 1270020 hemK 12348309 hemK Helicobacter pylori 35A protoporphyrinogen oxidase YP_005770336.1 1269190 D 585535 CDS YP_005770337.1 384896348 12348310 1270086..1271432 1 NC_017360.1 COG: COG0334; Pfam: PF02812, PF00208; InterPro: IPR006095; glutamate dehydrogenase (NADP(+)) 1271432 gdhA 12348310 gdhA Helicobacter pylori 35A glutamate dehydrogenase (NADP(+)) YP_005770337.1 1270086 D 585535 CDS YP_005770338.1 384896349 12348311 complement(1271451..1272845) 1 NC_017360.1 InterPro: IPR001503; alpha-1,3/4-fucosyltransferase 1272845 12348311 HMPREF4655_21266 Helicobacter pylori 35A alpha-1,3/4-fucosyltransferase YP_005770338.1 1271451 R 585535 CDS YP_005770339.1 384896350 12348312 complement(1272855..1275665) 1 NC_017360.1 COG: COG0755; Pfam: PF01578; InterPro: IPR002541; cytochrome c biogenesis protein 1275665 ycf 12348312 ycf Helicobacter pylori 35A cytochrome c biogenesis protein YP_005770339.1 1272855 R 585535 CDS YP_005770340.1 384896351 12348313 complement(1275674..1276345) 1 NC_017360.1 COG: COG2143; disulfide interchange protein 1276345 dsbC 12348313 dsbC Helicobacter pylori 35A disulfide interchange protein YP_005770340.1 1275674 R 585535 CDS YP_005770341.1 384896352 12348314 complement(1276419..1277426) 1 NC_017360.1 COG: COG0276; Pfam: PF00762; InterPro: IPR001015; ferrochelatase 1277426 hemH 12348314 hemH Helicobacter pylori 35A ferrochelatase YP_005770341.1 1276419 R 585535 CDS YP_005770342.1 384896353 12348315 1277482..1277913 1 NC_017360.1 TerC family integral membrane protein 1277913 12348315 HMPREF4655_21270 Helicobacter pylori 35A TerC family integral membrane protein YP_005770342.1 1277482 D 585535 CDS YP_005770343.1 384896354 12348316 1277914..1278594 1 NC_017360.1 COG: COG1385; Pfam: PF04452; InterPro: IPR006700; RsmE family RNA methyltransferase 1278594 12348316 HMPREF4655_21271 Helicobacter pylori 35A RsmE family RNA methyltransferase YP_005770343.1 1277914 D 585535 CDS YP_005770344.1 384896355 12348317 complement(1278618..1280840) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein HomD 1280840 homD2 12348317 homD2 Helicobacter pylori 35A outer membrane protein HomD YP_005770344.1 1278618 R 585535 CDS YP_005770345.1 384896356 12348318 complement(1280998..1281564) 1 NC_017360.1 COG: COG0717; Pfam: PF00692; InterPro: IPR011962; dCTP deaminase 1281564 dcd 12348318 dcd Helicobacter pylori 35A dCTP deaminase YP_005770345.1 1280998 R 585535 CDS YP_005770346.1 384896357 12348319 1281687..1282157 1 NC_017360.1 COG: COG0511; Pfam: PF00364; InterPro: IPR001249; acetyl-CoA carboxylase biotin carboxyl carrier subunit 1282157 accB 12348319 accB Helicobacter pylori 35A acetyl-CoA carboxylase biotin carboxyl carrier subunit YP_005770346.1 1281687 D 585535 CDS YP_005770347.1 384896358 12348320 1282163..1283530 1 NC_017360.1 COG: COG0439; Pfam: PF00289, PF02786, PF02785; InterPro: IPR004549; acetyl-CoA carboxylase subunit A 1283530 accC 12348320 accC Helicobacter pylori 35A acetyl-CoA carboxylase subunit A YP_005770347.1 1282163 D 585535 CDS YP_005770348.1 384896359 12348321 1283623..1284585 1 NC_017360.1 type II DNA modification enzyme (methyltransferase) 1284585 12348321 HMPREF4655_21276 Helicobacter pylori 35A type II DNA modification enzyme (methyltransferase) YP_005770348.1 1283623 D 585535 CDS YP_005770349.1 384896360 12348322 1284585..1285133 1 NC_017360.1 hypothetical protein 1285133 12348322 HMPREF4655_21277 Helicobacter pylori 35A hypothetical protein YP_005770349.1 1284585 D 585535 CDS YP_005770350.1 384896361 12348323 1285182..1285826 1 NC_017360.1 hypothetical protein 1285826 12348323 HMPREF4655_21278 Helicobacter pylori 35A hypothetical protein YP_005770350.1 1285182 D 585535 CDS YP_005770351.1 384896362 12348324 1285823..1286950 1 NC_017360.1 COG: COG0399; Pfam: PF01041; InterPro: IPR000653; UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase 1286950 pseC 12348324 pseC Helicobacter pylori 35A UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase YP_005770351.1 1285823 D 585535 CDS YP_005770352.1 384896363 12348326 1287268..1288293 1 NC_017360.1 COG: COG0208; Pfam: PF00268; InterPro: IPR000358; ribonucleotide-diphosphate reductase subunit beta 1288293 nrdB 12348326 nrdB Helicobacter pylori 35A ribonucleotide-diphosphate reductase subunit beta YP_005770352.1 1287268 D 585535 CDS YP_005770353.1 384896364 12348327 1288303..1288932 1 NC_017360.1 COG: COG2518; Pfam: PF01135; InterPro: IPR000682; protein-L-isoaspartate(D-aspartate) O-methyltransferase 1288932 pcm 12348327 pcm Helicobacter pylori 35A protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_005770353.1 1288303 D 585535 CDS YP_005770354.1 384896365 12348328 1288943..1289980 1 NC_017360.1 COG: COG0795; Pfam: PF03739; InterPro: IPR005495; hypothetical protein 1289980 12348328 HMPREF4655_21282 Helicobacter pylori 35A hypothetical protein YP_005770354.1 1288943 D 585535 CDS YP_005770355.1 384896366 12348329 1289981..1290709 1 NC_017360.1 COG: COG0101; Pfam: PF01416; InterPro: IPR001406; tRNA-pseudouridine synthase I 1290709 truA 12348329 truA Helicobacter pylori 35A tRNA-pseudouridine synthase I YP_005770355.1 1289981 D 585535 CDS YP_005770356.1 384896367 12348330 complement(1290703..1291737) 1 NC_017360.1 COG: COG1087; Pfam: PF01370; InterPro: IPR005886; UDP-glucose 4-epimerase 1291737 galE 12348330 galE Helicobacter pylori 35A UDP-glucose 4-epimerase YP_005770356.1 1290703 R 585535 CDS YP_005770357.1 384896368 12348333 1292270..1293805 1 NC_017360.1 outer membrane protein 1293805 12348333 HMPREF4655_21285 Helicobacter pylori 35A outer membrane protein YP_005770357.1 1292270 D 585535 CDS YP_005770358.1 384896369 12348334 1293827..1294579 1 NC_017360.1 COG: COG4221; Pfam: PF00106; InterPro: IPR002198; serine 3-dehydrogenase 1294579 sdh 12348334 sdh Helicobacter pylori 35A serine 3-dehydrogenase YP_005770358.1 1293827 D 585535 CDS YP_005770359.1 384896370 12348335 complement(1295030..1295902) 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; beta-lactamase 1295902 hcpC 12348335 hcpC Helicobacter pylori 35A beta-lactamase YP_005770359.1 1295030 R 585535 CDS YP_005770360.1 384896371 12348336 complement(1295972..1296598) 1 NC_017360.1 COG: COG0800; Pfam: PF01081; InterPro: IPR013785; 4-hydroxy-2-oxoglutarate aldolase 1296598 eda 12348336 eda Helicobacter pylori 35A 4-hydroxy-2-oxoglutarate aldolase YP_005770360.1 1295972 R 585535 CDS YP_005770361.1 384896372 12348337 complement(1296617..1298443) 1 NC_017360.1 COG: COG0129; Pfam: PF00920; InterPro: IPR004786; phosphogluconate dehydratase 1298443 edd 12348337 edd Helicobacter pylori 35A phosphogluconate dehydratase YP_005770361.1 1296617 R 585535 CDS YP_005770362.1 384896373 12348338 1298511..1299788 1 NC_017360.1 COG: COG0364; Pfam: PF00479, PF02781; InterPro: IPR001282; glucose-6-phosphate dehydrogenase 1299788 zwf 12348338 zwf Helicobacter pylori 35A glucose-6-phosphate dehydrogenase YP_005770362.1 1298511 D 585535 CDS YP_005770363.1 384896374 12348339 1299799..1300482 1 NC_017360.1 COG: COG0363; InterPro: IPR005900; 6-phosphogluconolactonase 1300482 pgl 12348339 pgl Helicobacter pylori 35A 6-phosphogluconolactonase YP_005770363.1 1299799 D 585535 CDS YP_005770364.1 384896375 12348340 1300469..1301479 1 NC_017360.1 COG: COG0837; Pfam: PF02685; InterPro: IPR003836; glucokinase 1301479 glk 12348340 glk Helicobacter pylori 35A glucokinase YP_005770364.1 1300469 D 585535 CDS YP_005770365.1 384896376 12348341 1301640..1302686 1 NC_017360.1 COG: COG1064; Pfam: PF08240, PF00107; InterPro: IPR002085; alcohol dehydrogenase 1302686 adhC 12348341 adhC Helicobacter pylori 35A alcohol dehydrogenase YP_005770365.1 1301640 D 585535 CDS YP_005770366.1 384896377 12348342 complement(1302698..1303858) 1 NC_017360.1 COG: COG1442; Pfam: PF01501; InterPro: IPR002495; LPS biosynthesis protein 1303858 12348342 HMPREF4655_21294 Helicobacter pylori 35A LPS biosynthesis protein YP_005770366.1 1302698 R 585535 CDS YP_005770367.1 384896378 12348343 1304046..1305353 1 NC_017360.1 hypothetical protein 1305353 12348343 HMPREF4655_21295 Helicobacter pylori 35A hypothetical protein YP_005770367.1 1304046 D 585535 CDS YP_005770368.1 384896379 12348344 complement(1305360..1306052) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1306052 12348344 HMPREF4655_21296 Helicobacter pylori 35A outer membrane protein YP_005770368.1 1305360 R 585535 CDS YP_005770369.1 384896380 12348345 1306300..1306860 1 NC_017360.1 COG: COG1014; Pfam: PF01558; InterPro: IPR011894; pyruvate synthase subunit PorC 1306860 porG 12348345 porG Helicobacter pylori 35A pyruvate synthase subunit PorC YP_005770369.1 1306300 D 585535 CDS YP_005770370.1 384896381 12348346 1306876..1307268 1 NC_017360.1 COG: COG1144; Pfam: PF00037; InterPro: IPR011898; pyruvate ferredoxin oxidoreductase 1307268 porD 12348346 porD Helicobacter pylori 35A pyruvate ferredoxin oxidoreductase YP_005770370.1 1306876 D 585535 CDS YP_005770371.1 384896382 12348347 1307279..1308502 1 NC_017360.1 COG: COG0674; Pfam: PF01855; InterPro: IPR002880; pyruvate ferredoxin oxidoreductase subunit alpha 1308502 porA 12348347 porA Helicobacter pylori 35A pyruvate ferredoxin oxidoreductase subunit alpha YP_005770371.1 1307279 D 585535 CDS YP_005770372.1 384896383 12348348 1308515..1309459 1 NC_017360.1 COG: COG1013; Pfam: PF02775; InterPro: IPR011766; pyruvate ferredoxin oxidoreductase subunit beta 1309459 porB 12348348 porB Helicobacter pylori 35A pyruvate ferredoxin oxidoreductase subunit beta YP_005770372.1 1308515 D 585535 CDS YP_005770373.1 384896384 12348349 1309569..1310891 1 NC_017360.1 COG: COG0015; Pfam: PF00206; InterPro: IPR004769; adenylosuccinate lyase 1310891 purB 12348349 purB Helicobacter pylori 35A adenylosuccinate lyase YP_005770373.1 1309569 D 585535 CDS YP_005770374.1 384896385 12348350 1310953..1311786 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1311786 12348350 HMPREF4655_21302 Helicobacter pylori 35A outer membrane protein YP_005770374.1 1310953 D 585535 CDS YP_005770375.1 384896386 12348351 complement(1311797..1313788) 1 NC_017360.1 COG: COG0556; Pfam: PF04851, PF00271, PF02151; InterPro: IPR004807; excision endonuclease subunit UvrB 1313788 uvrB 12348351 uvrB Helicobacter pylori 35A excision endonuclease subunit UvrB YP_005770375.1 1311797 R 585535 CDS YP_005770376.1 384896387 12348352 complement(1314207..1314347) 1 NC_017360.1 hypothetical protein 1314347 12348352 HMPREF4655_21304 Helicobacter pylori 35A hypothetical protein YP_005770376.1 1314207 R 585535 CDS YP_005770377.1 384896388 12348353 1314639..1314785 1 NC_017360.1 hypothetical protein 1314785 12348353 HMPREF4655_21305 Helicobacter pylori 35A hypothetical protein YP_005770377.1 1314639 D 585535 CDS YP_005770378.1 384896389 12348354 complement(1314936..1315823) 1 NC_017360.1 COG: COG0790; Pfam: PF08238; InterPro: IPR011990; cysteine-rich protein X 1315823 12348354 HMPREF4655_21306 Helicobacter pylori 35A cysteine-rich protein X YP_005770378.1 1314936 R 585535 CDS YP_005770379.1 384896390 12348355 complement(1315970..1317673) 1 NC_017360.1 COG: COG0405; Pfam: PF01019; InterPro: IPR000101; gamma-glutamyltranspeptidase 1317673 ggt 12348355 ggt Helicobacter pylori 35A gamma-glutamyltranspeptidase YP_005770379.1 1315970 R 585535 CDS YP_005770380.1 384896391 12348356 complement(1317878..1319698) 1 NC_017360.1 COG: COG1256; Pfam: PF06429; InterPro: IPR002371; flagellar hook-associated protein FlgK 1319698 flgK 12348356 flgK Helicobacter pylori 35A flagellar hook-associated protein FlgK YP_005770380.1 1317878 R 585535 CDS YP_005770381.1 384896392 12348357 complement(1319700..1320170) 1 NC_017360.1 hypothetical protein 1320170 12348357 HMPREF4655_21309 Helicobacter pylori 35A hypothetical protein YP_005770381.1 1319700 R 585535 CDS YP_005770382.1 384896393 12348358 complement(1320261..1321202) 1 NC_017360.1 COG: COG0270; Pfam: PF00145; InterPro: IPR001525; C-5 cytosine-specific DNA methylase 1321202 bsp6IM 12348358 bsp6IM Helicobacter pylori 35A C-5 cytosine-specific DNA methylase YP_005770382.1 1320261 R 585535 CDS YP_005770383.1 384896394 12348359 complement(1321359..1321589) 1 NC_017360.1 Pfam: PF05998; InterPro: IPR009250; negative regulator of flagellin synthesis FlgM 1321589 flgM 12348359 flgM Helicobacter pylori 35A negative regulator of flagellin synthesis FlgM YP_005770383.1 1321359 R 585535 CDS YP_005770384.1 384896395 12348360 complement(1321626..1321832) 1 NC_017360.1 hypothetical protein 1321832 12348360 HMPREF4655_21312 Helicobacter pylori 35A hypothetical protein YP_005770384.1 1321626 R 585535 CDS YP_005770385.1 384896396 12348361 complement(1321864..1322421) 1 NC_017360.1 COG: COG1047; Pfam: PF00254; InterPro: IPR001179; peptidyl-prolyl cis-trans isomerase 1322421 slyD 12348361 slyD Helicobacter pylori 35A peptidyl-prolyl cis-trans isomerase YP_005770385.1 1321864 R 585535 CDS YP_005770386.1 384896397 12348362 complement(1322408..1323403) 1 NC_017360.1 Pfam: PF07719; hypothetical protein 1323403 12348362 HMPREF4655_21314 Helicobacter pylori 35A hypothetical protein YP_005770386.1 1322408 R 585535 CDS YP_005770387.1 384896398 12348363 complement(1323411..1323950) 1 NC_017360.1 COG: COG2885; Pfam: PF00691; InterPro: IPR006665; peptidoglycan associated lipoprotein 1323950 12348363 HMPREF4655_21315 Helicobacter pylori 35A peptidoglycan associated lipoprotein YP_005770387.1 1323411 R 585535 CDS YP_005770388.1 384896399 12348364 complement(1324016..1325269) 1 NC_017360.1 COG: COG0823; Pfam: PF04052, PF07676; InterPro: IPR014167; translocation protein TolB 1325269 tolB 12348364 tolB Helicobacter pylori 35A translocation protein TolB YP_005770388.1 1324016 R 585535 CDS YP_005770389.1 384896400 12348365 complement(1325266..1326090) 1 NC_017360.1 hypothetical protein 1326090 12348365 HMPREF4655_21317 Helicobacter pylori 35A hypothetical protein YP_005770389.1 1325266 R 585535 CDS YP_005770390.1 384896401 12348366 complement(1326109..1326510) 1 NC_017360.1 COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TolR colicin import membrane protein 1326510 12348366 HMPREF4655_21318 Helicobacter pylori 35A TolR colicin import membrane protein YP_005770390.1 1326109 R 585535 CDS YP_005770391.1 384896402 12348367 complement(1326563..1327156) 1 NC_017360.1 COG: COG0811; Pfam: PF01618; InterPro: IPR002898; biopolymer transporter 1327156 exbB2 12348367 exbB2 Helicobacter pylori 35A biopolymer transporter YP_005770391.1 1326563 R 585535 CDS YP_005770392.1 384896403 12348368 complement(1327143..1327514) 1 NC_017360.1 COG: COG0355; Pfam: PF02823; InterPro: IPR001469; ATP synthase F1 sector epsilon subunit 1327514 atpC 12348368 atpC Helicobacter pylori 35A ATP synthase F1 sector epsilon subunit YP_005770392.1 1327143 R 585535 CDS YP_005770393.1 384896404 12348369 complement(1327525..1328934) 1 NC_017360.1 COG: COG0055; Pfam: PF02874, PF00006, PF00306; InterPro: IPR005722; ATP synthase F1 sector beta subunit 1328934 atpD 12348369 atpD Helicobacter pylori 35A ATP synthase F1 sector beta subunit YP_005770393.1 1327525 R 585535 CDS YP_005770394.1 384896405 12348370 complement(1328954..1329859) 1 NC_017360.1 COG: COG0224; Pfam: PF00231; InterPro: IPR000131; ATP synthase F1 sector gamma subunit 1329859 atpG 12348370 atpG Helicobacter pylori 35A ATP synthase F1 sector gamma subunit YP_005770394.1 1328954 R 585535 CDS YP_005770395.1 384896406 12348371 complement(1329874..1331385) 1 NC_017360.1 COG: COG0056; Pfam: PF02874, PF00006, PF00306; InterPro: IPR005294; ATP synthase F1 subcomplex subunit alpha 1331385 atpA 12348371 atpA Helicobacter pylori 35A ATP synthase F1 subcomplex subunit alpha YP_005770395.1 1329874 R 585535 CDS YP_005770396.1 384896407 12348372 complement(1331408..1331950) 1 NC_017360.1 ATP synthase F1 sector delta subunit 1331950 atpH 12348372 atpH Helicobacter pylori 35A ATP synthase F1 sector delta subunit YP_005770396.1 1331408 R 585535 CDS YP_005770397.1 384896408 12348373 complement(1331951..1332466) 1 NC_017360.1 COG: COG0711; Pfam: PF00430; ATP synthase subunit B 1332466 12348373 HMPREF4655_21325 Helicobacter pylori 35A ATP synthase subunit B YP_005770397.1 1331951 R 585535 CDS YP_005770398.1 384896409 12348374 complement(1332470..1332904) 1 NC_017360.1 Pfam: PF00430; F0F1 ATP synthase subunit B' 1332904 12348374 HMPREF4655_21326 Helicobacter pylori 35A F0F1 ATP synthase subunit B' YP_005770398.1 1332470 R 585535 CDS YP_005770399.1 384896410 12348375 complement(1333015..1333887) 1 NC_017360.1 COG: COG1475; Pfam: PF02195; InterPro: IPR004437; stage 0 DNA-binding protein 1333887 spo0J 12348375 spo0J Helicobacter pylori 35A stage 0 DNA-binding protein YP_005770399.1 1333015 R 585535 CDS YP_005770400.1 384896411 12348376 complement(1333890..1334693) 1 NC_017360.1 COG: COG1192; Pfam: PF01656; InterPro: IPR002586; sporulation initiation inhibitor protein Soj 1334693 soj 12348376 soj Helicobacter pylori 35A sporulation initiation inhibitor protein Soj YP_005770400.1 1333890 R 585535 CDS YP_005770401.1 384896412 12348377 complement(1334690..1335328) 1 NC_017360.1 COG: COG0340; Pfam: PF03099, PF02237; InterPro: IPR004408; biotin--protein ligase 1335328 birA 12348377 birA Helicobacter pylori 35A biotin--protein ligase YP_005770401.1 1334690 R 585535 CDS YP_005770402.1 384896413 12348378 complement(1335325..1336275) 1 NC_017360.1 COG: COG0223; Pfam: PF00551, PF02911; InterPro: IPR005794; methionyl-tRNA formyltransferase 1336275 fmt 12348378 fmt Helicobacter pylori 35A methionyl-tRNA formyltransferase YP_005770402.1 1335325 R 585535 CDS YP_005770403.1 384896414 12348379 complement(1336238..1338826) 1 NC_017360.1 Pfam: PF02463; ATPase 1338826 12348379 HMPREF4655_21331 Helicobacter pylori 35A ATPase YP_005770403.1 1336238 R 585535 CDS YP_005770404.1 384896415 12348380 complement(1338868..1340169) 1 NC_017360.1 COG: COG4487; hypothetical protein 1340169 12348380 HMPREF4655_21332 Helicobacter pylori 35A hypothetical protein YP_005770404.1 1338868 R 585535 CDS YP_005770405.1 384896416 12348382 complement(1343071..1343190) 1 NC_017360.1 hypothetical protein 1343190 12348382 HMPREF4655_21333 Helicobacter pylori 35A hypothetical protein YP_005770405.1 1343071 R 585535 CDS YP_005770406.1 384896417 12348383 complement(1343328..1343459) 1 NC_017360.1 hypothetical protein 1343459 12348383 HMPREF4655_21334 Helicobacter pylori 35A hypothetical protein YP_005770406.1 1343328 R 585535 CDS YP_005770407.1 384896418 12348384 complement(1343538..1344128) 1 NC_017360.1 hypothetical protein 1344128 12348384 HMPREF4655_21335 Helicobacter pylori 35A hypothetical protein YP_005770407.1 1343538 R 585535 CDS YP_005770408.1 384896419 12348385 complement(1344415..1344771) 1 NC_017360.1 COG: COG0335; Pfam: PF01245; InterPro: IPR001857; 50S ribosomal protein L19 1344771 rplS 12348385 rplS Helicobacter pylori 35A 50S ribosomal protein L19 YP_005770408.1 1344415 R 585535 CDS YP_005770409.1 384896420 12348386 complement(1344793..1345482) 1 NC_017360.1 COG: COG0336; Pfam: PF01746; InterPro: IPR002649; tRNA (guanine-N(1)-)-methyltransferase 1345482 trmD 12348386 trmD Helicobacter pylori 35A tRNA (guanine-N(1)-)-methyltransferase YP_005770409.1 1344793 R 585535 CDS YP_005770410.1 384896421 12348387 complement(1345483..1346037) 1 NC_017360.1 COG: COG0806; Pfam: PF01782, PF05239; InterPro: IPR011961; 16S rRNA processing protein RimM 1346037 rimM 12348387 rimM Helicobacter pylori 35A 16S rRNA processing protein RimM YP_005770410.1 1345483 R 585535 CDS YP_005770411.1 384896422 12348388 complement(1346038..1346385) 1 NC_017360.1 COG: COG1837; hypothetical protein 1346385 12348388 HMPREF4655_21339 Helicobacter pylori 35A hypothetical protein YP_005770411.1 1346038 R 585535 CDS YP_005770412.1 384896423 12348389 complement(1346402..1346632) 1 NC_017360.1 COG: COG0228; Pfam: PF00886; InterPro: IPR000307; 30S ribosomal protein S16 1346632 rpsP 12348389 rpsP Helicobacter pylori 35A 30S ribosomal protein S16 YP_005770412.1 1346402 R 585535 CDS YP_005770413.1 384896424 12348390 complement(1346704..1348050) 1 NC_017360.1 COG: COG0541; Pfam: PF02881, PF00448, PF02978; InterPro: IPR004780; signal recognition particle protein 1348050 ffh 12348390 ffh Helicobacter pylori 35A signal recognition particle protein YP_005770413.1 1346704 R 585535 CDS YP_005770414.1 384896425 12348391 complement(1348065..1350683) 1 NC_017360.1 COG: COG0525; Pfam: PF00133, PF08264; InterPro: IPR002303; valine--tRNA ligase 1350683 valS 12348391 valS Helicobacter pylori 35A valine--tRNA ligase YP_005770414.1 1348065 R 585535 CDS YP_005770415.1 384896426 12348392 1350820..1351227 1 NC_017360.1 COG: COG1699; Pfam: PF02623; InterPro: IPR003775; flagellar assembly factor FliW 1 1351227 12348392 HMPREF4655_21343 Helicobacter pylori 35A flagellar assembly factor FliW 1 YP_005770415.1 1350820 D 585535 CDS YP_005770416.1 384896427 12348393 1351239..1352300 1 NC_017360.1 COG: COG0707; Pfam: PF03033, PF04101; InterPro: IPR006009; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1352300 murG 12348393 murG Helicobacter pylori 35A UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_005770416.1 1351239 D 585535 CDS YP_005770417.1 384896428 12348394 1352410..1354500 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1354500 12348394 HMPREF4655_21345 Helicobacter pylori 35A outer membrane protein YP_005770417.1 1352410 D 585535 CDS YP_005770418.1 384896429 12348395 1354523..1358251 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1358251 12348395 HMPREF4655_21346 Helicobacter pylori 35A outer membrane protein YP_005770418.1 1354523 D 585535 CDS YP_005770419.1 384896430 12348396 1358265..1359059 1 NC_017360.1 COG: COG0345; Pfam: PF03807; InterPro: IPR000304; pyrroline-5-carboxylate reductase 1359059 proC 12348396 proC Helicobacter pylori 35A pyrroline-5-carboxylate reductase YP_005770419.1 1358265 D 585535 CDS YP_005770420.1 384896431 12348397 1359065..1359598 1 NC_017360.1 COG: COG2184; Pfam: PF02661; InterPro: IPR003812; cell filamentation protein 1359598 fic 12348397 fic Helicobacter pylori 35A cell filamentation protein YP_005770420.1 1359065 D 585535 CDS YP_005770421.1 384896432 12348398 complement(1359613..1360377) 1 NC_017360.1 hypothetical protein 1360377 12348398 HMPREF4655_21349 Helicobacter pylori 35A hypothetical protein YP_005770421.1 1359613 R 585535 CDS YP_005770422.1 384896433 12348399 complement(1360395..1360787) 1 NC_017360.1 hypothetical protein 1360787 12348399 HMPREF4655_21350 Helicobacter pylori 35A hypothetical protein YP_005770422.1 1360395 R 585535 CDS YP_005770423.1 384896434 12348400 complement(1360947..1361375) 1 NC_017360.1 COG: COG0319; Pfam: PF02130; InterPro: IPR002036; metalloprotease 1361375 12348400 HMPREF4655_21351 Helicobacter pylori 35A metalloprotease YP_005770423.1 1360947 R 585535 CDS YP_005770424.1 384896435 12348401 complement(1361429..1361923) 1 NC_017360.1 COG: COG0716; Pfam: PF00258; InterPro: IPR010086; flavodoxin 1361923 12348401 HMPREF4655_21352 Helicobacter pylori 35A flavodoxin YP_005770424.1 1361429 R 585535 CDS YP_005770425.1 384896436 12348402 complement(1362014..1362628) 1 NC_017360.1 COG: COG0586; DedA family protein 1362628 12348402 HMPREF4655_21353 Helicobacter pylori 35A DedA family protein YP_005770425.1 1362014 R 585535 CDS YP_005770426.1 384896437 12348403 1362729..1362920 1 NC_017360.1 COG: COG3197; Pfam: PF03597; InterPro: IPR004714; cytochrome oxidase maturation protein 1362920 ccoS 12348403 ccoS Helicobacter pylori 35A cytochrome oxidase maturation protein YP_005770426.1 1362729 D 585535 CDS YP_005770427.1 384896438 12348404 1362946..1363914 1 NC_017360.1 COG: COG0492; Pfam: PF00890, PF00070; pyridine nucleotide-disulfide oxidoreductase 1363914 trxB2 12348404 trxB2 Helicobacter pylori 35A pyridine nucleotide-disulfide oxidoreductase YP_005770427.1 1362946 D 585535 CDS YP_005770428.1 384896439 12348405 complement(1363928..1365088) 1 NC_017360.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; MccC family protein 1365088 12348405 HMPREF4655_21356 Helicobacter pylori 35A MccC family protein YP_005770428.1 1363928 R 585535 CDS YP_005770429.1 384896440 12348406 1365151..1366788 1 NC_017360.1 COG: COG0166; Pfam: PF00342; InterPro: IPR001672; glucose-6-phosphate isomerase 1366788 pgi 12348406 pgi Helicobacter pylori 35A glucose-6-phosphate isomerase YP_005770429.1 1365151 D 585535 CDS YP_005770430.1 384896441 12348407 1367095..1368510 1 NC_017360.1 Pfam: PF02521; InterPro: IPR003678; hof-family outer membrane protein 1368510 hofH 12348407 hofH Helicobacter pylori 35A hof-family outer membrane protein YP_005770430.1 1367095 D 585535 CDS YP_005770431.1 384896442 12348408 complement(1368816..1370909) 1 NC_017360.1 COG: COG1966; Pfam: PF02554; InterPro: IPR003706; carbon starvation protein A 1370909 cstA 12348408 cstA Helicobacter pylori 35A carbon starvation protein A YP_005770431.1 1368816 R 585535 CDS YP_005770432.1 384896443 12348409 1371090..1371743 1 NC_017360.1 COG: COG0765; Pfam: PF00528; InterPro: IPR000515; ABC superfamily ATP binding cassette transporter, permease protein 1371743 12348409 HMPREF4655_21360 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, permease protein YP_005770432.1 1371090 D 585535 CDS YP_005770433.1 384896444 12348410 1371746..1372417 1 NC_017360.1 COG: COG0765; Pfam: PF00528; InterPro: IPR000515; ABC superfamily ATP binding cassette transporter, membrane protein 1372417 12348410 HMPREF4655_21361 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, membrane protein YP_005770433.1 1371746 D 585535 CDS YP_005770434.1 384896445 12348411 1372419..1373165 1 NC_017360.1 COG: COG1126; Pfam: PF00005; InterPro: IPR003439; ABC superfamily ATP binding cassette transporter, ABC protein 1373165 12348411 HMPREF4655_21362 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein YP_005770434.1 1372419 D 585535 CDS YP_005770435.1 384896446 12348412 1373184..1374047 1 NC_017360.1 COG: COG0834; Pfam: PF00497; InterPro: IPR001638; ABC superfamily ATP binding cassette transporter, binding protein 1374047 12348412 HMPREF4655_21363 Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, binding protein YP_005770435.1 1373184 D 585535 CDS YP_005770436.1 384896447 12348413 1374168..1374719 1 NC_017360.1 hypothetical protein 1374719 12348413 HMPREF4655_21364 Helicobacter pylori 35A hypothetical protein YP_005770436.1 1374168 D 585535 CDS YP_005770437.1 384896448 12348414 complement(1374942..1376165) 1 NC_017360.1 COG: COG0738; Pfam: PF07690; InterPro: IPR011701; glucose/galactose transporter 1376165 gluP 12348414 gluP Helicobacter pylori 35A glucose/galactose transporter YP_005770437.1 1374942 R 585535 CDS YP_005770438.1 384896449 12348415 complement(1376295..1377602) 1 NC_017360.1 COG: COG2252; Pfam: PF00860; InterPro: IPR006043; hypoxanthine phosphoribosyltransferase 1377602 hpt 12348415 hpt Helicobacter pylori 35A hypoxanthine phosphoribosyltransferase YP_005770438.1 1376295 R 585535 CDS YP_005770439.1 384896450 12348416 complement(1378053..1379975) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1379975 12348416 HMPREF4655_21367 Helicobacter pylori 35A outer membrane protein YP_005770439.1 1378053 R 585535 CDS YP_005770440.1 384896451 12348417 complement(1380105..1380365) 1 NC_017360.1 hypothetical protein 1380365 12348417 HMPREF4655_21368 Helicobacter pylori 35A hypothetical protein YP_005770440.1 1380105 R 585535 CDS YP_005770441.1 384896452 12348418 complement(1380455..1381156) 1 NC_017360.1 COG: COG0813; Pfam: PF01048; InterPro: IPR000845; purine-nucleoside phosphorylase 1381156 deoD 12348418 deoD Helicobacter pylori 35A purine-nucleoside phosphorylase YP_005770441.1 1380455 R 585535 CDS YP_005770442.1 384896453 12348419 complement(1381153..1382394) 1 NC_017360.1 COG: COG1015; Pfam: PF08342, PF01676; InterPro: IPR010045; phosphopentomutase 1382394 deoB 12348419 deoB Helicobacter pylori 35A phosphopentomutase YP_005770442.1 1381153 R 585535 CDS YP_005770443.1 384896454 12348420 complement(1382406..1383662) 1 NC_017360.1 COG: COG1972; Pfam: PF01773, PF07670, PF07662; InterPro: IPR008276; CNT family concentrative nucleoside transporter 1383662 nupC 12348420 nupC Helicobacter pylori 35A CNT family concentrative nucleoside transporter YP_005770443.1 1382406 R 585535 CDS YP_005770444.1 384896455 12348422 1383989..1385320 1 NC_017360.1 COG: COG0477; Pfam: PF07690; InterPro: IPR011701; multidrug-efflux transporter 1385320 12348422 HMPREF4655_21372 Helicobacter pylori 35A multidrug-efflux transporter YP_005770444.1 1383989 D 585535 CDS YP_005770445.1 384896456 12348423 1385338..1386099 1 NC_017360.1 COG: COG0037; Pfam: PF01171; InterPro: IPR014729; PP-loop family protein 1386099 12348423 HMPREF4655_21373 Helicobacter pylori 35A PP-loop family protein YP_005770445.1 1385338 D 585535 CDS YP_005770446.1 384896457 12348424 complement(1386109..1387260) 1 NC_017360.1 COG: COG0475; Pfam: PF00999; InterPro: IPR006153; periplasmic nitrate reductase NapA 1387260 napA 12348424 napA Helicobacter pylori 35A periplasmic nitrate reductase NapA YP_005770446.1 1386109 R 585535 CDS YP_005770447.1 384896458 12348425 complement(1387286..1388665) 1 NC_017360.1 COG: COG0534; Pfam: PF01554; InterPro: IPR002528; hypothetical protein 1388665 12348425 HMPREF4655_21375 Helicobacter pylori 35A hypothetical protein YP_005770447.1 1387286 R 585535 CDS YP_005770448.1 384896459 12348426 complement(1388825..1390000) 1 NC_017360.1 COG: COG2814; Pfam: PF07690; InterPro: IPR011701; major facilitator family transporter 1390000 12348426 HMPREF4655_21376 Helicobacter pylori 35A major facilitator family transporter YP_005770448.1 1388825 R 585535 CDS YP_005770449.1 384896460 12348427 1390277..1391020 1 NC_017360.1 COG: COG3338; Pfam: PF00194; InterPro: IPR001148; carbonate dehydratase 1391020 cah 12348427 cah Helicobacter pylori 35A carbonate dehydratase YP_005770449.1 1390277 D 585535 CDS YP_005770450.1 384896461 12348428 complement(1391254..1392264) 1 NC_017360.1 Pfam: PF05917; InterPro: IPR008592; hypothetical protein 1392264 12348428 HMPREF4655_21378 Helicobacter pylori 35A hypothetical protein YP_005770450.1 1391254 R 585535 CDS YP_005770451.1 384896462 12348429 complement(1392694..1393734) 1 NC_017360.1 COG: COG0136; Pfam: PF01118, PF02774; InterPro: IPR005986; aspartate-semialdehyde dehydrogenase 1393734 asd 12348429 asd Helicobacter pylori 35A aspartate-semialdehyde dehydrogenase YP_005770451.1 1392694 R 585535 CDS YP_005770452.1 384896463 12348430 complement(1393721..1395049) 1 NC_017360.1 COG: COG0124; Pfam: PF00587, PF03129; InterPro: IPR015805; histidine--tRNA ligase 1395049 hisS 12348430 hisS Helicobacter pylori 35A histidine--tRNA ligase YP_005770452.1 1393721 R 585535 CDS YP_005770453.1 384896464 12348431 1395111..1396160 1 NC_017360.1 COG: COG0859; Pfam: PF01075; InterPro: IPR011910; heptosyltransferase II (RfaF) 1396160 rfaF 12348431 rfaF Helicobacter pylori 35A heptosyltransferase II (RfaF) YP_005770453.1 1395111 D 585535 CDS YP_005770454.1 384896465 12348432 complement(1396354..1396572) 1 NC_017360.1 secreted protein 1396572 12348432 HMPREF4655_21382 Helicobacter pylori 35A secreted protein YP_005770454.1 1396354 R 585535 CDS YP_005770455.1 384896466 12348433 1396690..1396869 1 NC_017360.1 hypothetical protein 1396869 12348433 HMPREF4655_21383 Helicobacter pylori 35A hypothetical protein YP_005770455.1 1396690 D 585535 CDS YP_005770456.1 384896467 12348434 complement(1397089..1399167) 1 NC_017360.1 COG: COG0480; Pfam: PF00009, PF03144, PF03764, PF00679; InterPro: IPR004540; elongation factor G 1399167 fusA 12348434 fusA Helicobacter pylori 35A elongation factor G YP_005770456.1 1397089 R 585535 CDS YP_005770457.1 384896468 12348435 complement(1399179..1399646) 1 NC_017360.1 COG: COG0049; Pfam: PF00177; InterPro: IPR000235; 30S ribosomal protein S7 1399646 rpsG 12348435 rpsG Helicobacter pylori 35A 30S ribosomal protein S7 YP_005770457.1 1399179 R 585535 CDS YP_005770458.1 384896469 12348436 complement(1399662..1400069) 1 NC_017360.1 COG: COG0048; Pfam: PF00164; InterPro: IPR012340; 30S ribosomal protein S12 1400069 rpsL 12348436 rpsL Helicobacter pylori 35A 30S ribosomal protein S12 YP_005770458.1 1399662 R 585535 CDS YP_005770459.1 384896470 12348437 complement(1400157..1408829) 1 NC_017360.1 COG: COG0086; Pfam: PF04563, PF04561, PF04565, PF00562, PF04560, PF04997, PF00623, PF04983, PF05000, PF04998; InterPro: IPR012754; DNA-directed RNA polymerase 1408829 rpoBC 12348437 rpoBC Helicobacter pylori 35A DNA-directed RNA polymerase YP_005770459.1 1400157 R 585535 CDS YP_005770460.1 384896471 12348438 complement(1409052..1409429) 1 NC_017360.1 COG: COG0222; Pfam: PF00542; InterPro: IPR000206; 50S ribosomal protein L7/L12 1409429 rplL 12348438 rplL Helicobacter pylori 35A 50S ribosomal protein L7/L12 YP_005770460.1 1409052 R 585535 CDS YP_005770461.1 384896472 12348439 complement(1409474..1409968) 1 NC_017360.1 COG: COG0244; Pfam: PF00466; InterPro: IPR001790; 50S ribosomal protein L10 1409968 rplJ 12348439 rplJ Helicobacter pylori 35A 50S ribosomal protein L10 YP_005770461.1 1409474 R 585535 CDS YP_005770462.1 384896473 12348440 complement(1410077..1410781) 1 NC_017360.1 COG: COG0081; Pfam: PF00687; InterPro: IPR005878; 50S ribosomal protein L1 1410781 rplA 12348440 rplA Helicobacter pylori 35A 50S ribosomal protein L1 YP_005770462.1 1410077 R 585535 CDS YP_005770463.1 384896474 12348441 complement(1410826..1411251) 1 NC_017360.1 COG: COG0080; Pfam: PF03946, PF00298; InterPro: IPR006519; 50S ribosomal protein L11 1411251 rplK 12348441 rplK Helicobacter pylori 35A 50S ribosomal protein L11 YP_005770463.1 1410826 R 585535 CDS YP_005770464.1 384896475 12348442 complement(1411269..1411802) 1 NC_017360.1 COG: COG0250; Pfam: PF02357, PF00467; InterPro: IPR001062; transcription termination/antitermination factor NusG 1411802 nusG 12348442 nusG Helicobacter pylori 35A transcription termination/antitermination factor NusG YP_005770464.1 1411269 R 585535 CDS YP_005770465.1 384896476 12348443 complement(1411827..1412006) 1 NC_017360.1 preprotein translocase 1412006 secE 12348443 secE Helicobacter pylori 35A preprotein translocase YP_005770465.1 1411827 R 585535 CDS YP_005770466.1 384896477 12348445 complement(1412264..1412422) 1 NC_017360.1 COG: COG0267; Pfam: PF00471; InterPro: IPR001705; 50S ribosomal protein L33 1412422 rpmG 12348445 rpmG Helicobacter pylori 35A 50S ribosomal protein L33 YP_005770466.1 1412264 R 585535 CDS YP_005770467.1 384896478 12348446 complement(1412456..1413655) 1 NC_017360.1 COG: COG0050; Pfam: PF00009, PF03144, PF03143; InterPro: IPR004541; translation elongation factor Tu 1413655 tuf 12348446 tuf Helicobacter pylori 35A translation elongation factor Tu YP_005770467.1 1412456 R 585535 CDS YP_005770468.1 384896479 12348451 1414362..1416098 1 NC_017360.1 COG: COG1132; Pfam: PF00005; InterPro: IPR003593; ABC superfamily ATP binding cassette transporter, ABC/membrane protein 1416098 wlaB 12348451 wlaB Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC/membrane protein YP_005770468.1 1414362 D 585535 CDS YP_005770469.1 384896480 12348452 complement(1416107..1416775) 1 NC_017360.1 Pfam: PF00702; InterPro: IPR005834; hypothetical protein 1416775 12348452 HMPREF4655_21397 Helicobacter pylori 35A hypothetical protein YP_005770469.1 1416107 R 585535 CDS YP_005770470.1 384896481 12348454 complement(1416879..1417934) 1 NC_017360.1 COG: COG3392; Pfam: PF02086; InterPro: IPR012327; site-specific DNA-methyltransferase (adenine-specific) 1417934 nlaIIIM 12348454 nlaIIIM Helicobacter pylori 35A site-specific DNA-methyltransferase (adenine-specific) YP_005770470.1 1416879 R 585535 CDS YP_005770471.1 384896482 12348455 complement(1418183..1418362) 1 NC_017360.1 Pfam: PF05862; InterPro: IPR008655; IceA2 protein 1418362 iceA2 12348455 iceA2 Helicobacter pylori 35A IceA2 protein YP_005770471.1 1418183 R 585535 CDS YP_005770472.1 384896483 12348456 complement(1418583..1419098) 1 NC_017360.1 COG: COG1045; Pfam: PF00132; InterPro: IPR005881; serine O-acetyltransferase 1419098 cysE 12348456 cysE Helicobacter pylori 35A serine O-acetyltransferase YP_005770472.1 1418583 R 585535 CDS YP_005770473.1 384896484 12348458 complement(1419139..1419258) 1 NC_017360.1 hypothetical protein 1419258 12348458 HMPREF4655_21401 Helicobacter pylori 35A hypothetical protein YP_005770473.1 1419139 R 585535 CDS YP_005770474.1 384896485 12348464 complement(1419765..1420082) 1 NC_017360.1 COG: COG0636; Pfam: PF00137; InterPro: IPR002379; ATP synthase F0 subunit C 1420082 atpE 12348464 atpE Helicobacter pylori 35A ATP synthase F0 subunit C YP_005770474.1 1419765 R 585535 CDS YP_005770475.1 384896486 12348465 1420460..1420729 1 NC_017360.1 hypothetical protein 1420729 12348465 HMPREF4655_21403 Helicobacter pylori 35A hypothetical protein YP_005770475.1 1420460 D 585535 CDS YP_005770476.1 384896487 12348466 1420914..1421522 1 NC_017360.1 hypothetical protein 1421522 12348466 HMPREF4655_21404 Helicobacter pylori 35A hypothetical protein YP_005770476.1 1420914 D 585535 CDS YP_005770477.1 384896488 12348467 complement(1421558..1423624) 1 NC_017360.1 COG: COG1185; Pfam: PF01138, PF03725, PF03726, PF00013, PF00575; InterPro: IPR012162; polyribonucleotide nucleotidyltransferase 1423624 pnp 12348467 pnp Helicobacter pylori 35A polyribonucleotide nucleotidyltransferase YP_005770477.1 1421558 R 585535 CDS YP_005770478.1 384896489 12348468 complement(1423627..1424349) 1 NC_017360.1 COG: COG1926; hypothetical protein 1424349 12348468 HMPREF4655_21406 Helicobacter pylori 35A hypothetical protein YP_005770478.1 1423627 R 585535 CDS YP_005770479.1 384896490 12348469 complement(1424346..1426607) 1 NC_017360.1 COG: COG1452; Pfam: PF04453; InterPro: IPR007543; organic solvent tolerance protein 1426607 ostA 12348469 ostA Helicobacter pylori 35A organic solvent tolerance protein YP_005770479.1 1424346 R 585535 CDS YP_005770480.1 384896491 12348470 complement(1426610..1427089) 1 NC_017360.1 hypothetical protein 1427089 12348470 HMPREF4655_21408 Helicobacter pylori 35A hypothetical protein YP_005770480.1 1426610 R 585535 CDS YP_005770481.1 384896492 12348472 complement(1427131..1428405) 1 NC_017360.1 COG: COG0151; Pfam: PF02844, PF01071, PF02843; InterPro: IPR000115; phosphoribosylamine--glycine ligase 1428405 purD 12348472 purD Helicobacter pylori 35A phosphoribosylamine--glycine ligase YP_005770481.1 1427131 R 585535 CDS YP_005770482.1 384896493 12348474 1428524..1428715 1 NC_017360.1 hypothetical protein 1428715 12348474 HMPREF4655_21410 Helicobacter pylori 35A hypothetical protein YP_005770482.1 1428524 D 585535 CDS YP_005770483.1 384896494 12348475 complement(1428717..1429403) 1 NC_017360.1 COG: COG1131; Pfam: PF00005; InterPro: IPR003439; ABC superfamily ATP binding cassette transporter, ABC protein (yhcG) 1429403 skfE 12348475 skfE Helicobacter pylori 35A ABC superfamily ATP binding cassette transporter, ABC protein (yhcG) YP_005770483.1 1428717 R 585535 CDS YP_005770484.1 384896495 12348476 complement(1429397..1430101) 1 NC_017360.1 COG: COG0020; Pfam: PF01255; InterPro: IPR001441; Di-trans,poly-cis-decaprenylcistransferase 1430101 uppS 12348476 uppS Helicobacter pylori 35A Di-trans,poly-cis-decaprenylcistransferase YP_005770484.1 1429397 R 585535 CDS YP_005770485.1 384896496 12348477 complement(1430141..1432981) 1 NC_017360.1 COG: COG0277; Pfam: PF01565, PF02913, PF00037; InterPro: IPR004113; oxidoreductase 1432981 dld 12348477 dld Helicobacter pylori 35A oxidoreductase YP_005770485.1 1430141 R 585535 CDS YP_005770486.1 384896497 12348478 1433053..1433385 1 NC_017360.1 COG: COG0607; Pfam: PF00581; InterPro: IPR001763; hypothetical protein 1433385 12348478 HMPREF4655_21414 Helicobacter pylori 35A hypothetical protein YP_005770486.1 1433053 D 585535 CDS YP_005770487.1 384896498 12348479 1433388..1434068 1 NC_017360.1 COG: COG1587; Pfam: PF02602; InterPro: IPR003754; uroporphyrinogen-III synthase 1434068 hemD 12348479 hemD Helicobacter pylori 35A uroporphyrinogen-III synthase YP_005770487.1 1433388 D 585535 CDS YP_005770488.1 384896499 12348480 1434115..1434507 1 NC_017360.1 COG: COG0239; Pfam: PF02537; InterPro: IPR003691; camphor resistance protein CrcB 1434507 crcB 12348480 crcB Helicobacter pylori 35A camphor resistance protein CrcB YP_005770488.1 1434115 D 585535 CDS YP_005770489.1 384896500 12348481 complement(1434550..1435602) 1 NC_017360.1 COG: COG0635; Pfam: PF04055, PF06969; InterPro: IPR004559; coproporphyrinogen dehydrogenase 1435602 12348481 HMPREF4655_21417 Helicobacter pylori 35A coproporphyrinogen dehydrogenase YP_005770489.1 1434550 R 585535 CDS YP_005770490.1 384896501 12348482 1435668..1435973 1 NC_017360.1 COG: COG2863; Pfam: PF00034; InterPro: IPR009056; cytochrome c-553 1435973 12348482 HMPREF4655_21418 Helicobacter pylori 35A cytochrome c-553 YP_005770490.1 1435668 D 585535 CDS YP_005770491.1 384896502 12348483 1436133..1436606 1 NC_017360.1 COG: COG0494; Pfam: PF00293; InterPro: IPR000086; dinucleoside polyphosphate hydrolase 1436606 nidH 12348483 nidH Helicobacter pylori 35A dinucleoside polyphosphate hydrolase YP_005770491.1 1436133 D 585535 CDS YP_005770492.1 384896503 12348484 1436600..1437817 1 NC_017360.1 COG: COG0527; Pfam: PF00696, PF01842; InterPro: IPR005260; aspartate kinase 1437817 lysC 12348484 lysC Helicobacter pylori 35A aspartate kinase YP_005770492.1 1436600 D 585535 CDS YP_005770493.1 384896504 12348485 1437814..1438356 1 NC_017360.1 hypothetical protein 1438356 12348485 HMPREF4655_21421 Helicobacter pylori 35A hypothetical protein YP_005770493.1 1437814 D 585535 CDS YP_005770494.1 384896505 12348486 1438353..1439009 1 NC_017360.1 DNA-directed DNA polymerase III subunit delta' 1439009 holB 12348486 holB Helicobacter pylori 35A DNA-directed DNA polymerase III subunit delta' YP_005770494.1 1438353 D 585535 CDS YP_005770495.1 384896506 12348487 1439006..1440148 1 NC_017360.1 COG: COG0294; Pfam: PF00809; InterPro: IPR000489; dihydropteroate synthase 1440148 folP 12348487 folP Helicobacter pylori 35A dihydropteroate synthase YP_005770495.1 1439006 D 585535 CDS YP_005770496.1 384896507 12348488 complement(1440173..1440634) 1 NC_017360.1 hypothetical protein 1440634 12348488 HMPREF4655_21424 Helicobacter pylori 35A hypothetical protein YP_005770496.1 1440173 R 585535 CDS YP_005770497.1 384896508 12348489 1441022..1441918 1 NC_017360.1 COG: COG0697; Pfam: PF00892; InterPro: IPR000620; hypothetical protein 1441918 12348489 HMPREF4655_21425 Helicobacter pylori 35A hypothetical protein YP_005770497.1 1441022 D 585535 CDS YP_005770498.1 384896509 12348490 1441922..1443169 1 NC_017360.1 hypothetical protein 1443169 12348490 HMPREF4655_21426 Helicobacter pylori 35A hypothetical protein YP_005770498.1 1441922 D 585535 CDS YP_005770499.1 384896510 12348491 1443248..1443799 1 NC_017360.1 COG: COG2952; Pfam: PF04368; InterPro: IPR007463; hypothetical protein 1443799 12348491 HMPREF4655_21427 Helicobacter pylori 35A hypothetical protein YP_005770499.1 1443248 D 585535 CDS YP_005770500.1 384896511 12348492 1443799..1444926 1 NC_017360.1 COG: COG0505; Pfam: PF00988, PF00117; InterPro: IPR006274; carbamoyl-phosphate synthase small subunit 1444926 carA 12348492 carA Helicobacter pylori 35A carbamoyl-phosphate synthase small subunit YP_005770500.1 1443799 D 585535 CDS YP_005770501.1 384896512 12348493 1445093..1446097 1 NC_017360.1 COG: COG0388; Pfam: PF00795; InterPro: IPR003010; formamidase 1446097 amiF 12348493 amiF Helicobacter pylori 35A formamidase YP_005770501.1 1445093 D 585535 CDS YP_005770502.1 384896513 12348494 complement(1446233..1446433) 1 NC_017360.1 hypothetical protein 1446433 12348494 HMPREF4655_21430 Helicobacter pylori 35A hypothetical protein YP_005770502.1 1446233 R 585535 CDS YP_005770503.1 384896514 12348495 complement(1446553..1447125) 1 NC_017360.1 COG: COG0424; Pfam: PF02545; InterPro: IPR003697; septum formation protein Maf 1447125 maf2 12348495 maf2 Helicobacter pylori 35A septum formation protein Maf YP_005770503.1 1446553 R 585535 CDS YP_005770504.1 384896515 12348496 complement(1447127..1449670) 1 NC_017360.1 COG: COG0013; Pfam: PF01411, PF07973, PF02272; InterPro: IPR002318; alanine--tRNA ligase 1449670 alaS 12348496 alaS Helicobacter pylori 35A alanine--tRNA ligase YP_005770504.1 1447127 R 585535 CDS YP_005770505.1 384896516 12348497 1449790..1450020 1 NC_017360.1 COG: COG2841; Pfam: PF04325; InterPro: IPR007420; hypothetical protein (DUF465) family protein 1450020 12348497 HMPREF4655_21433 Helicobacter pylori 35A hypothetical protein (DUF465) family protein YP_005770505.1 1449790 D 585535 CDS YP_005770506.1 384896517 12348498 1450249..1450389 1 NC_017360.1 hypothetical protein 1450389 12348498 HMPREF4655_21434 Helicobacter pylori 35A hypothetical protein YP_005770506.1 1450249 D 585535 CDS YP_005770507.1 384896518 12348499 complement(1450631..1452751) 1 NC_017360.1 Pfam: PF01856; InterPro: IPR002718; outer membrane protein 1452751 12348499 HMPREF4655_21435 Helicobacter pylori 35A outer membrane protein YP_005770507.1 1450631 R 585535 CDS YP_005770508.1 384896519 12348500 complement(1453023..1453280) 1 NC_017360.1 COG: COG0238; Pfam: PF01084; InterPro: IPR001648; 30S ribosomal protein S18 1453280 rpsR 12348500 rpsR Helicobacter pylori 35A 30S ribosomal protein S18 YP_005770508.1 1453023 R 585535 CDS YP_005770509.1 384896520 12348501 complement(1453304..1453849) 1 NC_017360.1 COG: COG0629; Pfam: PF00436; InterPro: IPR011344; single-strand binding protein 1453849 ssb 12348501 ssb Helicobacter pylori 35A single-strand binding protein YP_005770509.1 1453304 R 585535 CDS YP_005770510.1 384896521 12348502 complement(1453859..1454335) 1 NC_017360.1 COG: COG0360; Pfam: PF01250; InterPro: IPR014717; 30S ribosomal protein S6 1454335 rpsF 12348502 rpsF Helicobacter pylori 35A 30S ribosomal protein S6 YP_005770510.1 1453859 R 585535 CDS YP_005770511.1 384896522 12348503 complement(1454430..1455452) 1 NC_017360.1 COG: COG1466; Pfam: PF06144; DNA polymerase III subunit delta 1455452 12348503 HMPREF4655_21439 Helicobacter pylori 35A DNA polymerase III subunit delta YP_005770511.1 1454430 R 585535 CDS YP_005770512.1 384896523 12348504 complement(1455442..1457376) 1 NC_017360.1 COG: COG0557; Pfam: PF00773; InterPro: IPR004476; 3'-5' exoribonuclease R 1457376 12348504 HMPREF4655_21440 Helicobacter pylori 35A 3'-5' exoribonuclease R YP_005770512.1 1455442 R 585535 CDS YP_005770513.1 384896524 12348505 complement(1457376..1458167) 1 NC_017360.1 COG: COG0169; Pfam: PF08501, PF01488; InterPro: IPR011342; shikimate dehydrogenase 1458167 aroE 12348505 aroE Helicobacter pylori 35A shikimate dehydrogenase YP_005770513.1 1457376 R 585535 CDS YP_005770514.1 384896525 12348506 complement(1458175..1458777) 1 NC_017360.1 Pfam: PF08239; InterPro: IPR003646; bacterial SH3 domain protein 1458777 12348506 HMPREF4655_21442 Helicobacter pylori 35A bacterial SH3 domain protein YP_005770514.1 1458175 R 585535 CDS YP_005770515.1 384896526 12348507 complement(1458786..1459832) 1 NC_017360.1 COG: COG4174; Pfam: PF00528; InterPro: IPR000515; oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein 1459832 12348507 HMPREF4655_21443 Helicobacter pylori 35A oligopeptide ABC superfamily ATP binding cassette transporter, membrane protein YP_005770515.1 1458786 R 585535 CDS YP_005770516.1 384896527 12348508 complement(1459829..1461610) 1 NC_017360.1 COG: COG4166; Pfam: PF00496; InterPro: IPR000914; oligopeptide ABC superfamily ATP binding cassette transporter periplasmic oligopeptide-binding protein 1461610 oppA 12348508 oppA Helicobacter pylori 35A oligopeptide ABC superfamily ATP binding cassette transporter periplasmic oligopeptide-binding protein YP_005770516.1 1459829 R 585535 CDS YP_005770517.1 384896528 12348509 complement(1461611..1462591) 1 NC_017360.1 COG: COG0180; Pfam: PF00579; InterPro: IPR002306; tryptophan--tRNA ligase 1462591 trpS 12348509 trpS Helicobacter pylori 35A tryptophan--tRNA ligase YP_005770517.1 1461611 R 585535 CDS YP_005770518.1 384896529 12348510 complement(1462663..1463391) 1 NC_017360.1 COG: COG0500; Pfam: PF08241; InterPro: IPR011814; biotin biosynthesis protein BioC 1463391 bioC 12348510 bioC Helicobacter pylori 35A biotin biosynthesis protein BioC YP_005770518.1 1462663 R 585535 CDS YP_005770519.1 384896530 12348511 1463509..1464111 1 NC_017360.1 COG: COG1314; Pfam: PF03840; InterPro: IPR004692; preprotein translocase subunit SecG 1464111 secG 12348511 secG Helicobacter pylori 35A preprotein translocase subunit SecG YP_005770519.1 1463509 D 585535 CDS YP_005770520.1 384896531 12348512 1464111..1464668 1 NC_017360.1 COG: COG0233; Pfam: PF01765; InterPro: IPR015998; ribosome recycling factor 1464668 frr 12348512 frr Helicobacter pylori 35A ribosome recycling factor YP_005770520.1 1464111 D 585535 CDS YP_005770521.1 384896532 12348513 1464672..1465277 1 NC_017360.1 COG: COG0461; Pfam: PF00156; InterPro: IPR006273; orotate phosphoribosyltransferase 1465277 pyrE2 12348513 pyrE2 Helicobacter pylori 35A orotate phosphoribosyltransferase YP_005770521.1 1464672 D 585535 CDS YP_005770522.1 384896533 12348514 1465267..1465731 1 NC_017360.1 COG: COG1714; Pfam: PF06271; InterPro: IPR010432; hypothetical protein 1465731 12348514 HMPREF4655_21450 Helicobacter pylori 35A hypothetical protein YP_005770522.1 1465267 D 585535 CDS YP_005770523.1 384896534 12348515 1465728..1466417 1 NC_017360.1 COG: COG0846; Pfam: PF02146; InterPro: IPR003000; NAD-dependent deacetylase 1466417 12348515 HMPREF4655_21451 Helicobacter pylori 35A NAD-dependent deacetylase YP_005770523.1 1465728 D 585535 CDS YP_005770524.1 384896535 12348516 1466520..1466921 1 NC_017360.1 COG: COG0838; Pfam: PF00507; InterPro: IPR000440; NADH-quinone oxidoreductase subunit A 1466921 nuoA 12348516 nuoA Helicobacter pylori 35A NADH-quinone oxidoreductase subunit A YP_005770524.1 1466520 D 585535 CDS YP_005770525.1 384896536 12348517 1466921..1467400 1 NC_017360.1 COG: COG0377; Pfam: PF01058; InterPro: IPR014406; NADH-quinone oxidoreductase subunit B 1467400 nuoB 12348517 nuoB Helicobacter pylori 35A NADH-quinone oxidoreductase subunit B YP_005770525.1 1466921 D 585535 CDS YP_005770526.1 384896537 12348518 1467400..1468197 1 NC_017360.1 COG: COG0852; Pfam: PF00329; InterPro: IPR010218; NADH-quinone oxidoreductase subunit C 1468197 nuoC 12348518 nuoC Helicobacter pylori 35A NADH-quinone oxidoreductase subunit C YP_005770526.1 1467400 D 585535 CDS YP_005770527.1 384896538 12348519 1468199..1469428 1 NC_017360.1 COG: COG0649; Pfam: PF00346; InterPro: IPR010219; NADH-quinone oxidoreductase subunit D 1469428 nuoD 12348519 nuoD Helicobacter pylori 35A NADH-quinone oxidoreductase subunit D YP_005770527.1 1468199 D 585535 CDS YP_005770528.1 384896539 12348520 1469425..1469655 1 NC_017360.1 NADH-quinone oxidoreductase subunit E 1469655 nuoE 12348520 nuoE Helicobacter pylori 35A NADH-quinone oxidoreductase subunit E YP_005770528.1 1469425 D 585535 CDS YP_005770529.1 384896540 12348521 1469658..1470644 1 NC_017360.1 NADH-quinone oxidoreductase subunit F 1470644 nuoF 12348521 nuoF Helicobacter pylori 35A NADH-quinone oxidoreductase subunit F YP_005770529.1 1469658 D 585535 CDS YP_005770530.1 384896541 12348522 1470641..1473175 1 NC_017360.1 COG: COG1034; Pfam: PF00111, PF00037; InterPro: IPR001041; NADH-ubiquinone oxidoreductase subunit G 1473175 nqoG 12348522 nqoG Helicobacter pylori 35A NADH-ubiquinone oxidoreductase subunit G YP_005770530.1 1470641 D 585535 CDS YP_005770531.1 384896542 12348523 1473172..1474161 1 NC_017360.1 COG: COG1005; Pfam: PF00146; InterPro: IPR001694; NADH-quinone oxidoreductase subunit H 1474161 nuoH 12348523 nuoH Helicobacter pylori 35A NADH-quinone oxidoreductase subunit H YP_005770531.1 1473172 D 585535 CDS YP_005770532.1 384896543 12348524 1474172..1474834 1 NC_017360.1 COG: COG1143; Pfam: PF00037; InterPro: IPR010226; NADH-quinone oxidoreductase subunit I 1474834 nuoI 12348524 nuoI Helicobacter pylori 35A NADH-quinone oxidoreductase subunit I YP_005770532.1 1474172 D 585535 CDS YP_005770533.1 384896544 12348525 1474821..1475375 1 NC_017360.1 COG: COG0839; Pfam: PF00499; InterPro: IPR001457; NADH-ubiquinone oxidoreductase subunit J 1475375 nqoJ 12348525 nqoJ Helicobacter pylori 35A NADH-ubiquinone oxidoreductase subunit J YP_005770533.1 1474821 D 585535 CDS YP_005770534.1 384896545 12348526 1475372..1475674 1 NC_017360.1 COG: COG0713; Pfam: PF00420; InterPro: IPR001133; NADH-quinone oxidoreductase subunit K 1475674 nuoK 12348526 nuoK Helicobacter pylori 35A NADH-quinone oxidoreductase subunit K YP_005770534.1 1475372 D 585535 CDS YP_005770535.1 384896546 12348527 1475677..1477515 1 NC_017360.1 COG: COG1009; Pfam: PF00662, PF00361, PF06455; InterPro: IPR003945; NADH-quinone oxidoreductase subunit L 1477515 nuoL 12348527 nuoL Helicobacter pylori 35A NADH-quinone oxidoreductase subunit L YP_005770535.1 1475677 D 585535 CDS YP_005770536.1 384896547 12348528 1477519..1479057 1 NC_017360.1 COG: COG1008; Pfam: PF00361; InterPro: IPR010227; NADH-quinone oxidoreductase subunit M 1479057 nuoM 12348528 nuoM Helicobacter pylori 35A NADH-quinone oxidoreductase subunit M YP_005770536.1 1477519 D 585535 CDS YP_005770537.1 384896548 12348529 1479044..1480516 1 NC_017360.1 COG: COG1007; Pfam: PF00361; InterPro: IPR010096; NADH-ubiquinone oxidoreductase subunit N 1480516 nqoN 12348529 nqoN Helicobacter pylori 35A NADH-ubiquinone oxidoreductase subunit N YP_005770537.1 1479044 D 585535 CDS YP_005770538.1 384896549 12348530 1480506..1482917 1 NC_017360.1 Pfam: PF07719; paralysed flagella protein 1482917 pflA 12348530 pflA Helicobacter pylori 35A paralysed flagella protein YP_005770538.1 1480506 D 585535 CDS YP_005770539.1 384896550 12348531 1482919..1484295 1 NC_017360.1 COG: COG1109; Pfam: PF02878, PF02879, PF02880, PF00408; InterPro: IPR016055; phosphomannomutase 1484295 algC 12348531 algC Helicobacter pylori 35A phosphomannomutase YP_005770539.1 1482919 D 585535 CDS YP_005770540.1 384896551 12348532 1484409..1484576 1 NC_017360.1 hypothetical protein 1484576 12348532 HMPREF4655_21468 Helicobacter pylori 35A hypothetical protein YP_005770540.1 1484409 D 585535 CDS YP_005770541.1 384896552 12348533 1484672..1484806 1 NC_017360.1 hypothetical protein 1484806 12348533 HMPREF4655_21469 Helicobacter pylori 35A hypothetical protein YP_005770541.1 1484672 D 585535 CDS YP_005770542.1 384896553 12348534 complement(1485039..1485827) 1 NC_017360.1 COG: COG0159; Pfam: PF00290; InterPro: IPR013785; tryptophan synthase subunit alpha 1485827 trpA 12348534 trpA Helicobacter pylori 35A tryptophan synthase subunit alpha YP_005770542.1 1485039 R 585535 CDS YP_005770543.1 384896554 12348535 complement(1485824..1487005) 1 NC_017360.1 COG: COG0133; Pfam: PF00291; InterPro: IPR006654; tryptophan synthase subunit beta 1487005 trpB 12348535 trpB Helicobacter pylori 35A tryptophan synthase subunit beta YP_005770543.1 1485824 R 585535 CDS YP_005770544.1 384896555 12348536 complement(1487007..1488365) 1 NC_017360.1 COG: COG0134; Pfam: PF00218, PF00697; InterPro: IPR013785; Indole-3-glycerol phosphate synthase 1488365 trpC2 12348536 trpC2 Helicobacter pylori 35A Indole-3-glycerol phosphate synthase YP_005770544.1 1487007 R 585535 CDS YP_005770545.1 384896556 12348537 complement(1488358..1489365) 1 NC_017360.1 COG: COG0547; Pfam: PF02885, PF00591; InterPro: IPR005940; anthranilate phosphoribosyltransferase 1489365 trpD 12348537 trpD Helicobacter pylori 35A anthranilate phosphoribosyltransferase YP_005770545.1 1488358 R 585535 CDS YP_005770546.1 384896557 12348538 complement(1489362..1489946) 1 NC_017360.1 COG: COG0512; Pfam: PF00117; InterPro: IPR006221; anthranilate synthase component II 1489946 trpG 12348538 trpG Helicobacter pylori 35A anthranilate synthase component II YP_005770546.1 1489362 R 585535 CDS YP_005770547.1 384896558 12348539 complement(1489943..1491502) 1 NC_017360.1 COG: COG0147; Pfam: PF04715, PF00425; InterPro: IPR005801; anthranilate synthase component I TrpE 1491502 trpE 12348539 trpE Helicobacter pylori 35A anthranilate synthase component I TrpE YP_005770547.1 1489943 R 585535 CDS YP_005770548.1 384896559 12348540 complement(1491673..1492731) 1 NC_017360.1 COG: COG0859; heptosyltransferase III 1492731 12348540 HMPREF4655_21476 Helicobacter pylori 35A heptosyltransferase III YP_005770548.1 1491673 R 585535 CDS YP_005770549.1 384896560 12348541 complement(1492798..1493535) 1 NC_017360.1 COG: COG2503; Pfam: PF03767; InterPro: IPR006423; lipoprotein e(P4) family 5'-nucleotidase 1493535 12348541 HMPREF4655_21477 Helicobacter pylori 35A lipoprotein e(P4) family 5'-nucleotidase YP_005770549.1 1492798 R 585535 CDS YP_005770550.1 384896561 12348542 1493660..1494208 1 NC_017360.1 COG: COG2353; Pfam: PF04264; InterPro: IPR007372; hypothetical protein 1494208 12348542 HMPREF4655_21478 Helicobacter pylori 35A hypothetical protein YP_005770550.1 1493660 D 585535 CDS YP_005770551.1 384896562 12348543 1494789..1495445 1 NC_017360.1 COG: COG0819; Pfam: PF03070; InterPro: IPR016084; thiaminase 1495445 tenA 12348543 tenA Helicobacter pylori 35A thiaminase YP_005770551.1 1494789 D 585535 CDS YP_005770552.1 384896563 12348544 1495567..1496229 1 NC_017360.1 COG: COG3201; Pfam: PF04973; InterPro: IPR006419; nicotinamide mononucleotide transporter 1496229 pnuC 12348544 pnuC Helicobacter pylori 35A nicotinamide mononucleotide transporter YP_005770552.1 1495567 D 585535 CDS YP_005770553.1 384896564 12348545 1496217..1496831 1 NC_017360.1 COG: COG1564; Pfam: PF04263; InterPro: IPR006282; thiamine diphosphokinase 1496831 12348545 HMPREF4655_21481 Helicobacter pylori 35A thiamine diphosphokinase YP_005770553.1 1496217 D 585535 CDS YP_005770554.1 384896565 12348546 complement(1497327..1497677) 1 NC_017360.1 COG: COG0203; Pfam: PF01196; InterPro: IPR000456; 50S ribosomal protein L17 1497677 rplQ 12348546 rplQ Helicobacter pylori 35A 50S ribosomal protein L17 YP_005770554.1 1497327 R 585535 CDS YP_005770555.1 384896566 12348547 complement(1497677..1498711) 1 NC_017360.1 COG: COG0202; Pfam: PF01193, PF01000, PF03118; InterPro: IPR011773; DNA-directed RNA polymerase subunit alpha 1498711 rpoA 12348547 rpoA Helicobacter pylori 35A DNA-directed RNA polymerase subunit alpha YP_005770555.1 1497677 R 585535 CDS YP_005770556.1 384896567 12348548 complement(1498723..1499349) 1 NC_017360.1 COG: COG0522; Pfam: PF00163, PF01479; InterPro: IPR005709; 30S ribosomal protein S4 1499349 rpsD 12348548 rpsD Helicobacter pylori 35A 30S ribosomal protein S4 YP_005770556.1 1498723 R 585535 CDS YP_005770557.1 384896568 12348549 complement(1499359..1499754) 1 NC_017360.1 COG: COG0100; Pfam: PF00411; InterPro: IPR001971; 30S ribosomal protein S11 1499754 rpsK 12348549 rpsK Helicobacter pylori 35A 30S ribosomal protein S11 YP_005770557.1 1499359 R 585535 CDS YP_005770558.1 384896569 12348550 complement(1499777..1500139) 1 NC_017360.1 COG: COG0099; Pfam: PF00416; InterPro: IPR001892; 30S ribosomal protein S13 1500139 rpsM 12348550 rpsM Helicobacter pylori 35A 30S ribosomal protein S13 YP_005770558.1 1499777 R 585535 CDS YP_005770559.1 384896570 12348551 complement(1500143..1500256) 1 NC_017360.1 Pfam: PF00444; InterPro: IPR000473; 50S ribosomal protein L36 1500256 rpmJ 12348551 rpmJ Helicobacter pylori 35A 50S ribosomal protein L36 YP_005770559.1 1500143 R 585535 CDS YP_005770560.1 384896571 12348552 complement(1500335..1500553) 1 NC_017360.1 COG: COG0361; Pfam: PF01176; InterPro: IPR012340; translation initiation factor IF-1 1500553 infA 12348552 infA Helicobacter pylori 35A translation initiation factor IF-1 YP_005770560.1 1500335 R 585535 CDS YP_005770561.1 384896572 12348553 complement(1500553..1501314) 1 NC_017360.1 COG: COG0024; Pfam: PF00557; InterPro: IPR002467; methionyl aminopeptidase 1501314 map 12348553 map Helicobacter pylori 35A methionyl aminopeptidase YP_005770561.1 1500553 R 585535 CDS YP_005770562.1 384896573 12348554 complement(1501314..1502576) 1 NC_017360.1 COG: COG0201; Pfam: PF00344; InterPro: IPR002208; preprotein translocase subunit SecY 1502576 secY 12348554 secY Helicobacter pylori 35A preprotein translocase subunit SecY YP_005770562.1 1501314 R 585535 CDS YP_005770563.1 384896574 12348555 complement(1502614..1503021) 1 NC_017360.1 COG: COG0200; Pfam: PF01305; InterPro: IPR005749; 50S ribosomal protein L15 1503021 rplO 12348555 rplO Helicobacter pylori 35A 50S ribosomal protein L15 YP_005770563.1 1502614 R 585535 CDS YP_005770564.1 384896575 12348556 complement(1503033..1503494) 1 NC_017360.1 COG: COG0098; Pfam: PF00333, PF03719; InterPro: IPR000851; 30S ribosomal protein S5 1503494 rpsE 12348556 rpsE Helicobacter pylori 35A 30S ribosomal protein S5 YP_005770564.1 1503033 R 585535 CDS YP_005770565.1 384896576 12348557 complement(1503491..1503847) 1 NC_017360.1 COG: COG0256; Pfam: PF00861; InterPro: IPR005484; 50S ribosomal protein L18 1503847 rplR 12348557 rplR Helicobacter pylori 35A 50S ribosomal protein L18 YP_005770565.1 1503491 R 585535 CDS YP_005770566.1 384896577 12348558 complement(1503861..1504397) 1 NC_017360.1 COG: COG0097; Pfam: PF00347; InterPro: IPR000702; 50S ribosomal protein L6 1504397 rplF 12348558 rplF Helicobacter pylori 35A 50S ribosomal protein L6 YP_005770566.1 1503861 R 585535 CDS YP_005770567.1 384896578 12348559 complement(1504408..1504803) 1 NC_017360.1 COG: COG0096; Pfam: PF00410; InterPro: IPR000630; 30S ribosomal protein S8 1504803 rpsH 12348559 rpsH Helicobacter pylori 35A 30S ribosomal protein S8 YP_005770567.1 1504408 R 585535 CDS YP_005770568.1 384896579 12348560 complement(1504813..1504998) 1 NC_017360.1 COG: COG0199; Pfam: PF00253; InterPro: IPR001209; 30S ribosomal protein S14 1504998 rpsN 12348560 rpsN Helicobacter pylori 35A 30S ribosomal protein S14 YP_005770568.1 1504813 R 585535 CDS YP_005770569.1 384896580 12348561 complement(1505008..1505553) 1 NC_017360.1 COG: COG0094; Pfam: PF00281, PF00673; InterPro: IPR002132; 50S ribosomal protein L5 1505553 rplE 12348561 rplE Helicobacter pylori 35A 50S ribosomal protein L5 YP_005770569.1 1505008 R 585535 CDS YP_005770570.1 384896581 12348562 complement(1505566..1505787) 1 NC_017360.1 COG: COG0198; Pfam: PF00467; InterPro: IPR003256; 50S ribosomal protein L24 1505787 rplX 12348562 rplX Helicobacter pylori 35A 50S ribosomal protein L24 YP_005770570.1 1505566 R 585535 CDS YP_005770571.1 384896582 12348563 complement(1505787..1506155) 1 NC_017360.1 COG: COG0093; Pfam: PF00238; InterPro: IPR005745; 50S ribosomal protein L14 1506155 rplN 12348563 rplN Helicobacter pylori 35A 50S ribosomal protein L14 YP_005770571.1 1505787 R 585535 CDS YP_005770572.1 384896583 12348564 complement(1506158..1506418) 1 NC_017360.1 COG: COG0186; Pfam: PF00366; InterPro: IPR012340; 30S ribosomal protein S17 1506418 rpsQ 12348564 rpsQ Helicobacter pylori 35A 30S ribosomal protein S17 YP_005770572.1 1506158 R 585535 CDS YP_005770573.1 384896584 12348565 complement(1506433..1506633) 1 NC_017360.1 Pfam: PF00831; InterPro: IPR001854; 50S ribosomal protein L29 1506633 rpmC 12348565 rpmC Helicobacter pylori 35A 50S ribosomal protein L29 YP_005770573.1 1506433 R 585535 CDS YP_005770574.1 384896585 12348566 complement(1506620..1507045) 1 NC_017360.1 COG: COG0197; Pfam: PF00252; InterPro: IPR000114; 50S ribosomal protein L16 1507045 rplP 12348566 rplP Helicobacter pylori 35A 50S ribosomal protein L16 YP_005770574.1 1506620 R 585535 CDS YP_005770575.1 384896586 12348567 complement(1507048..1507752) 1 NC_017360.1 COG: COG0092; Pfam: PF00417, PF07650, PF00189; InterPro: IPR005704; 30S ribosomal protein S3 1507752 rpsC 12348567 rpsC Helicobacter pylori 35A 30S ribosomal protein S3 YP_005770575.1 1507048 R 585535 CDS YP_005770576.1 384896587 12348568 complement(1507756..1508124) 1 NC_017360.1 COG: COG0091; Pfam: PF00237; InterPro: IPR001063; 50S ribosomal protein L22 1508124 rplV 12348568 rplV Helicobacter pylori 35A 50S ribosomal protein L22 YP_005770576.1 1507756 R 585535 CDS YP_005770577.1 384896588 12348569 complement(1508134..1508415) 1 NC_017360.1 COG: COG0185; Pfam: PF00203; InterPro: IPR002222; 30S ribosomal protein S19 1508415 rpsS 12348569 rpsS Helicobacter pylori 35A 30S ribosomal protein S19 YP_005770577.1 1508134 R 585535 CDS YP_005770578.1 384896589 12348570 complement(1508427..1509257) 1 NC_017360.1 COG: COG0090; Pfam: PF00181, PF03947; InterPro: IPR005880; 50S ribosomal protein L2 1509257 rplB 12348570 rplB Helicobacter pylori 35A 50S ribosomal protein L2 YP_005770578.1 1508427 R 585535 CDS YP_005770579.1 384896590 12348571 complement(1509273..1509554) 1 NC_017360.1 COG: COG0089; Pfam: PF00276; InterPro: IPR012677; 50S ribosomal protein L23 1509554 rplW 12348571 rplW Helicobacter pylori 35A 50S ribosomal protein L23 YP_005770579.1 1509273 R 585535 CDS YP_005770580.1 384896591 12348572 complement(1509558..1510205) 1 NC_017360.1 COG: COG0088; Pfam: PF00573; InterPro: IPR002136; 50S ribosomal protein L4/L1 family protein 1510205 rplD 12348572 rplD Helicobacter pylori 35A 50S ribosomal protein L4/L1 family protein YP_005770580.1 1509558 R 585535 CDS YP_005770581.1 384896592 12348573 complement(1510240..1510815) 1 NC_017360.1 COG: COG0087; Pfam: PF00297; InterPro: IPR000597; 50S ribosomal protein L3 1510815 rplC 12348573 rplC Helicobacter pylori 35A 50S ribosomal protein L3 YP_005770581.1 1510240 R 585535 CDS YP_005770582.1 384896593 12348574 complement(1510852..1511193) 1 NC_017360.1 COG: COG0051; Pfam: PF00338; InterPro: IPR001848; 30S ribosomal protein S10 1511193 rpsJ 12348574 rpsJ Helicobacter pylori 35A 30S ribosomal protein S10 YP_005770582.1 1510852 R 585535 CDS YP_005770583.1 384896594 12348575 1511377..1512459 1 NC_017360.1 ATP-binding protein 1512459 12348575 HMPREF4655_21511 Helicobacter pylori 35A ATP-binding protein YP_005770583.1 1511377 D 585535 CDS YP_005770584.1 384896595 12348576 1512696..1513277 1 NC_017360.1 hypothetical protein 1513277 12348576 HMPREF4655_21512 Helicobacter pylori 35A hypothetical protein YP_005770584.1 1512696 D 585535 CDS YP_005770585.1 384896596 12348577 complement(1513251..1513865) 1 NC_017360.1 COG: COG0164; Pfam: PF01351; InterPro: IPR001352; ribonuclease H 1513865 rnhB 12348577 rnhB Helicobacter pylori 35A ribonuclease H YP_005770585.1 1513251 R 585535 CDS YP_005770586.1 384896597 12348578 complement(1513896..1514147) 1 NC_017360.1 hypothetical protein 1514147 12348578 HMPREF4655_21514 Helicobacter pylori 35A hypothetical protein YP_005770586.1 1513896 R 585535 CDS YP_005770587.1 384896598 12348579 complement(1514170..1515561) 1 NC_017360.1 COG: COG0114; Pfam: PF00206; InterPro: IPR005677; fumarate hydratase 1515561 fumC 12348579 fumC Helicobacter pylori 35A fumarate hydratase YP_005770587.1 1514170 R 585535 CDS YP_005770588.1 384896599 12348580 1515737..1516114 1 NC_017360.1 hypothetical protein 1516114 12348580 HMPREF4655_21516 Helicobacter pylori 35A hypothetical protein YP_005770588.1 1515737 D 585535 CDS YP_005770589.1 384896600 12348581 1516119..1517357 1 NC_017360.1 Pfam: PF02321; InterPro: IPR003423; hypothetical protein 1517357 12348581 HMPREF4655_21517 Helicobacter pylori 35A hypothetical protein YP_005770589.1 1516119 D 585535 CDS YP_005770590.1 384896601 12348582 1517354..1518352 1 NC_017360.1 COG: COG0845; cation efflux system protein 1518352 czcA2 12348582 czcA2 Helicobacter pylori 35A cation efflux system protein YP_005770590.1 1517354 D 585535 CDS YP_005770591.1 384896602 12348583 1518353..1521466 1 NC_017360.1 COG: COG3696; Pfam: PF00873; InterPro: IPR004763; cation efflux system protein 1521466 czcA3 12348583 czcA3 Helicobacter pylori 35A cation efflux system protein YP_005770591.1 1518353 D 585535 CDS YP_005770592.1 384896603 12348584 complement(1521463..1521738) 1 NC_017360.1 COG: COG1687; Pfam: PF05437; InterPro: IPR008407; branched-chain amino acid transporter AzlD 1521738 azlD 12348584 azlD Helicobacter pylori 35A branched-chain amino acid transporter AzlD YP_005770592.1 1521463 R 585535 CDS YP_005770593.1 384896604 12348585 complement(1521804..1522490) 1 NC_017360.1 COG: COG1296; Pfam: PF03591; InterPro: IPR004471; azaleucine resistance protein AzlC 1522490 azlC 12348585 azlC Helicobacter pylori 35A azaleucine resistance protein AzlC YP_005770593.1 1521804 R 585535 CDS YP_005770594.1 384896605 12348586 complement(1522501..1523610) 1 NC_017360.1 COG: COG0484; Pfam: PF00226, PF00684, PF01556; InterPro: IPR012724; chaperone DnaJ 1523610 dnaJ2 12348586 dnaJ2 Helicobacter pylori 35A chaperone DnaJ YP_005770594.1 1522501 R 585535 CDS YP_005770595.1 384896606 12348587 complement(1523649..1523783) 1 NC_017360.1 hypothetical protein 1523783 12348587 HMPREF4655_21523 Helicobacter pylori 35A hypothetical protein YP_005770595.1 1523649 R 585535 CDS YP_005770596.1 384896607 12348588 1523789..1524865 1 NC_017360.1 hypothetical protein 1524865 12348588 HMPREF4655_21524 Helicobacter pylori 35A hypothetical protein YP_005770596.1 1523789 D 585535 CDS YP_005770597.1 384896608 12348589 complement(1524880..1525908) 1 NC_017360.1 COG: COG0482; Pfam: PF03054; InterPro: IPR004506; tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase 1525908 trmU2 12348589 trmU2 Helicobacter pylori 35A tRNA (5-methyl aminomethyl-2-thiouridylate)-methyltransferase YP_005770597.1 1524880 R 585535 CDS YP_005770598.1 384896609 12348590 1526032..1526811 1 NC_017360.1 COG: COG2214; Pfam: PF00226; hypothetical protein 1526811 12348590 HMPREF4655_21526 Helicobacter pylori 35A hypothetical protein YP_005770598.1 1526032 D 585535 CDS YP_005770599.1 384896610 12348591 complement(1526808..1527332) 1 NC_017360.1 COG: COG1057; Pfam: PF01467; InterPro: IPR005248; nicotinate-nucleotide adenylyltransferase 1527332 nadD 12348591 nadD Helicobacter pylori 35A nicotinate-nucleotide adenylyltransferase YP_005770599.1 1526808 R 585535 CDS YP_005770600.1 384896611 12348592 complement(1527316..1527762) 1 NC_017360.1 COG: COG0864; Pfam: PF01402, PF08753; InterPro: IPR014864; CopG family transcriptional regulator 1527762 nikR 12348592 nikR Helicobacter pylori 35A CopG family transcriptional regulator YP_005770600.1 1527316 R 585535 CDS YP_005770601.1 384896612 12348593 1528080..1528517 1 NC_017360.1 COG: COG0811; Pfam: PF01618; InterPro: IPR014172; TonB-system energizer ExbB 1528517 exbB3 12348593 exbB3 Helicobacter pylori 35A TonB-system energizer ExbB YP_005770601.1 1528080 D 585535 CDS YP_005770602.1 384896613 12348594 1528514..1528903 1 NC_017360.1 COG: COG0848; Pfam: PF02472; InterPro: IPR003400; TonB system transporter ExbD 1528903 expD 12348594 expD Helicobacter pylori 35A TonB system transporter ExbD YP_005770602.1 1528514 D 585535 CDS YP_005770603.1 384896614 12348595 1528869..1529720 1 NC_017360.1 COG: COG0810; Pfam: PF03544; InterPro: IPR006260; siderophore-mediated iron transport protein TonB 1529720 12348595 HMPREF4655_21531 Helicobacter pylori 35A siderophore-mediated iron transport protein TonB YP_005770603.1 1528869 D 585535 CDS YP_005770604.1 384896615 12348596 1529892..1530179 1 NC_017360.1 COG: COG0863; Pfam: PF01856, PF01555; InterPro: IPR002941; DNA (cytosine-5-)-methyltransferase 1530179 dpnA 12348596 dpnA Helicobacter pylori 35A DNA (cytosine-5-)-methyltransferase YP_005770604.1 1529892 D 585535 CDS YP_005770605.1 384896616 12348597 1530231..1531223 1 NC_017360.1 COG: COG2957; Pfam: PF04371; InterPro: IPR007466; agmatine deiminase 1531223 aguA 12348597 aguA Helicobacter pylori 35A agmatine deiminase YP_005770605.1 1530231 D 585535 CDS YP_005770606.1 384896617 12348598 1531220..1533472 1 NC_017360.1 COG: COG0068; Pfam: PF00708, PF07503, PF01300; InterPro: IPR004421; hydrogenase maturation protein HypF 1533472 hypF 12348598 hypF Helicobacter pylori 35A hydrogenase maturation protein HypF YP_005770606.1 1531220 D 585535 CDS YP_005770607.1 384896618 12348599 1533475..1534473 1 NC_017360.1 COG: COG0309; Pfam: PF00586, PF02769; InterPro: IPR011854; hydrogenase expression/formation protein HypE 1534473 hypE 12348599 hypE Helicobacter pylori 35A hydrogenase expression/formation protein HypE YP_005770607.1 1533475 D 585535 CDS YP_005770608.1 384896619 12348600 complement(1534488..1534607) 1 NC_017360.1 hypothetical protein 1534607 12348600 HMPREF4655_21536 Helicobacter pylori 35A hypothetical protein YP_005770608.1 1534488 R 585535 CDS YP_005770609.1 384896620 12348601 complement(1534722..1535654) 1 NC_017360.1 COG: COG0451; Pfam: PF01370; InterPro: IPR001509; GDP-L-fucose synthase 1535654 fcl 12348601 fcl Helicobacter pylori 35A GDP-L-fucose synthase YP_005770609.1 1534722 R 585535 CDS YP_005770610.1 384896621 12348602 complement(1535647..1536840) 1 NC_017360.1 COG: COG1089; Pfam: PF01370; InterPro: IPR006368; GDP-mannose 4,6-dehydratase 1536840 gmd 12348602 gmd Helicobacter pylori 35A GDP-mannose 4,6-dehydratase YP_005770610.1 1535647 R 585535 CDS YP_005770611.1 384896622 12348603 complement(1536806..1538218) 1 NC_017360.1 COG: COG0836; Pfam: PF00483, PF01050; InterPro: IPR006375; mannose-6-phosphate isomerase 1538218 pmi 12348603 pmi Helicobacter pylori 35A mannose-6-phosphate isomerase YP_005770611.1 1536806 R 585535 CDS YP_005770612.1 384896623 12348604 complement(1538288..1539424) 1 NC_017360.1 COG: COG2948; Pfam: PF03743; InterPro: IPR005498; comB10 competence protein 1539424 comB10 12348604 comB10 Helicobacter pylori 35A comB10 competence protein YP_005770612.1 1538288 R 585535 CDS YP_005770613.1 384896624 12348605 complement(1539417..1540379) 1 NC_017360.1 COG: COG3504; Pfam: PF03524; comB9 competence protein 1540379 comB9 12348605 comB9 Helicobacter pylori 35A comB9 competence protein YP_005770613.1 1539417 R 585535 CDS YP_005770614.1 384896625 12348606 complement(1540379..1541122) 1 NC_017360.1 COG: COG3736; Pfam: PF04335; InterPro: IPR007430; comB8 competence protein 1541122 comB8 12348606 comB8 Helicobacter pylori 35A comB8 competence protein YP_005770614.1 1540379 R 585535 CDS YP_005770615.1 384896626 12348607 complement(1541248..1542303) 1 NC_017360.1 NADH-ubiquinone oxidoreductase subunit 1542303 12348607 HMPREF4655_21543 Helicobacter pylori 35A NADH-ubiquinone oxidoreductase subunit YP_005770615.1 1541248 R 585535 CDS YP_005770616.1 384896627 12348608 complement(1542311..1543309) 1 NC_017360.1 hypothetical protein 1543309 12348608 HMPREF4655_21544 Helicobacter pylori 35A hypothetical protein YP_005770616.1 1542311 R 585535 CDS YP_005770617.1 384896628 12348609 complement(1543306..1543599) 1 NC_017360.1 COG: COG0718; Pfam: PF02575; InterPro: IPR004401; hypothetical protein 1543599 12348609 HMPREF4655_21545 Helicobacter pylori 35A hypothetical protein YP_005770617.1 1543306 R 585535 CDS YP_005770618.1 384896629 12348610 complement(1543610..1543960) 1 NC_017360.1 COG: COG0853; Pfam: PF02261; InterPro: IPR003190; aspartate 1-decarboxylase 1543960 panD 12348610 panD Helicobacter pylori 35A aspartate 1-decarboxylase YP_005770618.1 1543610 R 585535 CDS YP_005770619.1 384896630 12348611 complement(1543950..1546172) 1 NC_017360.1 COG: COG0542; Pfam: PF02861, PF00004, PF07724; InterPro: IPR003593; ATP-dependent C1p protease 1546172 clpA 12348611 clpA Helicobacter pylori 35A ATP-dependent C1p protease YP_005770619.1 1543950 R 585535 CDS YP_005770620.1 384896631 12348612 complement(1546172..1546447) 1 NC_017360.1 COG: COG2127; Pfam: PF02617; InterPro: IPR014719; ATP-dependent Clp protease adaptor protein ClpS 1546447 clpS 12348612 clpS Helicobacter pylori 35A ATP-dependent Clp protease adaptor protein ClpS YP_005770620.1 1546172 R 585535 CDS YP_005770621.1 384896632 12348613 complement(1546467..1546880) 1 NC_017360.1 Pfam: PF00582; InterPro: IPR006016; hypothetical protein 1546880 12348613 HMPREF4655_21549 Helicobacter pylori 35A hypothetical protein YP_005770621.1 1546467 R 585535 CDS YP_005770622.1 384896633 12348614 1547013..1547333 1 NC_017360.1 hypothetical protein 1547333 12348614 HMPREF4655_21550 Helicobacter pylori 35A hypothetical protein YP_005770622.1 1547013 D 585535 CDS YP_005770623.1 384896634 12348615 1547330..1547629 1 NC_017360.1 hypothetical protein 1547629 12348615 HMPREF4655_21551 Helicobacter pylori 35A hypothetical protein YP_005770623.1 1547330 D 585535 CDS YP_005770624.1 384896635 12348616 1547633..1548289 1 NC_017360.1 COG: COG0132; InterPro: IPR004472; dethiobiotin synthetase 1548289 bioD 12348616 bioD Helicobacter pylori 35A dethiobiotin synthetase YP_005770624.1 1547633 D 585535 CDS YP_005770625.1 384896636 12348617 complement(1548266..1548799) 1 NC_017360.1 Pfam: PF07509; InterPro: IPR011088; hypothetical protein 1548799 12348617 HMPREF4655_21553 Helicobacter pylori 35A hypothetical protein YP_005770625.1 1548266 R 585535 CDS YP_005770626.1 384896637 12348618 complement(1548865..1550142) 1 NC_017360.1 COG: COG0538; Pfam: PF00180; InterPro: IPR004439; isocitrate dehydrogenase (NADP(+)) 1550142 icd 12348618 icd Helicobacter pylori 35A isocitrate dehydrogenase (NADP(+)) YP_005770626.1 1548865 R 585535 CDS YP_005770627.1 384896638 12348619 1550341..1551621 1 NC_017360.1 COG: COG0372; Pfam: PF00285; InterPro: IPR010953; citrate (Si)-synthase 1551621 gltA 12348619 gltA Helicobacter pylori 35A citrate (Si)-synthase YP_005770627.1 1550341 D 585535 CDS YP_005770628.1 384896639 12348620 complement(1551587..1551751) 1 NC_017360.1 Na(+)/H(+) antiporter subunit G 1551751 12348620 HMPREF4655_21556 Helicobacter pylori 35A Na(+)/H(+) antiporter subunit G YP_005770628.1 1551587 R 585535 CDS YP_005770629.1 384896640 12348621 complement(1551869..1552318) 1 NC_017360.1 Pfam: PF01223; endonuclease 1552318 12348621 HMPREF4655_21557 Helicobacter pylori 35A endonuclease YP_005770629.1 1551869 R 585535 CDS YP_005770630.1 384896641 12348622 complement(1552443..1554341) 1 NC_017360.1 COG: COG2189; Pfam: PF01555; InterPro: IPR002941; methylase 1554341 mod3 12348622 mod3 Helicobacter pylori 35A methylase YP_005770630.1 1552443 R 585535 CDS YP_005770631.1 384896642 12348623 complement(1554335..1556944) 1 NC_017360.1 COG: COG3421; Pfam: PF04851; InterPro: IPR014001; type III restriction-modification enzyme 1556944 12348623 HMPREF4655_21559 Helicobacter pylori 35A type III restriction-modification enzyme YP_005770631.1 1554335 R 585535 CDS YP_005770632.1 384896643 12348624 1557073..1557924 1 NC_017360.1 COG: COG0502; Pfam: PF04055, PF06968; InterPro: IPR013785; biotin synthase 1557924 bioB 12348624 bioB Helicobacter pylori 35A biotin synthase YP_005770632.1 1557073 D 585535 CDS YP_005770633.1 384896644 12348625 1557924..1558802 1 NC_017360.1 COG: COG1295; Pfam: PF03631; InterPro: IPR004664; YihY family protein 1558802 yihY 12348625 yihY Helicobacter pylori 35A YihY family protein YP_005770633.1 1557924 D 585535 CDS YP_005770634.1 384896645 12348626 complement(1559527..1559658) 1 NC_017360.1 hypothetical protein 1559658 12348626 HMPREF4655_21562 Helicobacter pylori 35A hypothetical protein YP_005770634.1 1559527 R 585535 CDS YP_005770635.1 384896646 12348627 complement(1559718..1560230) 1 NC_017360.1 hypothetical protein 1560230 12348627 HMPREF4655_21563 Helicobacter pylori 35A hypothetical protein YP_005770635.1 1559718 R 585535 CDS YP_005770636.1 384896647 12348631 complement(1564155..1564307) 1 NC_017360.1 hypothetical protein 1564307 12348631 HMPREF4655_21564 Helicobacter pylori 35A hypothetical protein YP_005770636.1 1564155 R 585535 CDS YP_005770637.1 384896648 12348632 1564522..1564872 1 NC_017360.1 hypothetical protein 1564872 12348632 HMPREF4655_21565 Helicobacter pylori 35A hypothetical protein YP_005770637.1 1564522 D 585535 CDS