-- dump date 20140619_112408 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type NP_859532.1 32265500 1493156 141..2423 1 NC_004917.1 similar to Helicobacter pylori toxin-like outer membrane protein; hypothetical protein 2423 1493156 HH0001 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859532.1 141 D 235279 CDS NP_859533.1 32265501 1493157 2484..3989 1 NC_004917.1 phosphoribosylanthranilate isomerase 3989 trpC 1493157 trpC Helicobacter hepaticus ATCC 51449 phosphoribosylanthranilate isomerase NP_859533.1 2484 D 235279 CDS NP_859534.1 32265502 1493158 3986..5032 1 NC_004917.1 similar to Streptomyces coelicolor lipoprotein; hypothetical protein 5032 1493158 HH0003 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859534.1 3986 D 235279 CDS NP_859535.1 32265503 1493159 complement(5053..5607) 1 NC_004917.1 similar to GGDEF family protein; hypothetical protein 5607 1493159 HH0004 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859535.1 5053 R 235279 CDS NP_859536.1 32265504 1493160 complement(5633..6196) 1 NC_004917.1 similar to Campylobacter jejuni iron-binding protein; GGDEF family protein; hypothetical protein 6196 1493160 HH0005 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859536.1 5633 R 235279 CDS NP_859537.1 32265505 1493161 complement(6282..6905) 1 NC_004917.1 ribonuclease HII 6905 rnhB 1493161 rnhB Helicobacter hepaticus ATCC 51449 ribonuclease HII NP_859537.1 6282 R 235279 CDS NP_859538.1 32265506 1493162 complement(7073..7681) 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 7681 hopZ 1493162 hopZ Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859538.1 7073 R 235279 CDS NP_859539.1 32265507 1493163 complement(7845..8888) 1 NC_004917.1 essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; GTPase ObgE 8888 obgE 1493163 obgE Helicobacter hepaticus ATCC 51449 GTPase ObgE NP_859539.1 7845 R 235279 CDS NP_859540.1 32265508 1493164 complement(9016..9273) 1 NC_004917.1 involved in the peptidyltransferase reaction during translation; 50S ribosomal protein L27 9273 rpmA 1493164 rpmA Helicobacter hepaticus ATCC 51449 50S ribosomal protein L27 NP_859540.1 9016 R 235279 CDS NP_859541.1 32265509 1493165 complement(9290..9604) 1 NC_004917.1 50S ribosomal protein L21 9604 rplU 1493165 rplU Helicobacter hepaticus ATCC 51449 50S ribosomal protein L21 NP_859541.1 9290 R 235279 CDS NP_859542.1 32265510 1493166 9758..10585 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; related to metalloendopeptidases; hypothetical protein 10585 1493166 HH0011 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859542.1 9758 D 235279 CDS NP_859543.1 32265511 1493167 complement(10571..11254) 1 NC_004917.1 similar to Campylobacter jejuni transcriptional regulator Cj0466; hypothetical protein 11254 1493167 HH0012 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859543.1 10571 R 235279 CDS NP_859544.1 32265512 1493168 11394..13283 1 NC_004917.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA 13283 gidA 1493168 gidA Helicobacter hepaticus ATCC 51449 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA NP_859544.1 11394 D 235279 CDS NP_859545.1 32265513 1493169 13308..13934 1 NC_004917.1 similar to Helicobacter pylori HP0232 secreted protein involved in flagellar motility; hypothetical protein 13934 1493169 HH0014 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859545.1 13308 D 235279 CDS NP_859546.1 32265514 1493170 13936..15108 1 NC_004917.1 similar to Helicobacter pylori HP0233; hypothetical protein 15108 ygiC 1493170 ygiC Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859546.1 13936 D 235279 CDS NP_859547.1 32265515 1493171 complement(15102..16670) 1 NC_004917.1 predicted secreted protein; hypothetical protein 16670 1493171 HH0016 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859547.1 15102 R 235279 CDS NP_859548.1 32265516 1493172 complement(16692..18134) 1 NC_004917.1 aspartate oxidase 18134 1493172 HH0017 Helicobacter hepaticus ATCC 51449 aspartate oxidase NP_859548.1 16692 R 235279 CDS NP_859549.1 32265517 1493173 18344..18802 1 NC_004917.1 similar to Helicobacter pylori HP0820; hypothetical protein 18802 1493173 HH0018 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859549.1 18344 D 235279 CDS NP_859550.1 32265518 1493174 18792..20657 1 NC_004917.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; excinuclease ABC subunit C 20657 uvrC 1493174 uvrC Helicobacter hepaticus ATCC 51449 excinuclease ABC subunit C NP_859550.1 18792 D 235279 CDS NP_859551.1 32265519 1493175 20820..22151 1 NC_004917.1 hypothetical protein 22151 1493175 HH0020 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859551.1 20820 D 235279 CDS NP_859552.1 32265520 1493176 22148..23623 1 NC_004917.1 two-component sensor histidine kinase 23623 1493176 HH0021 Helicobacter hepaticus ATCC 51449 two-component sensor histidine kinase NP_859552.1 22148 D 235279 CDS NP_859553.1 32265521 1493177 23613..24287 1 NC_004917.1 two-component response regulator family protein 24287 1493177 HH0022 Helicobacter hepaticus ATCC 51449 two-component response regulator family protein NP_859553.1 23613 D 235279 CDS NP_859554.1 32265522 1493178 24450..25742 1 NC_004917.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; transcription termination factor Rho 25742 rho 1493178 rho Helicobacter hepaticus ATCC 51449 transcription termination factor Rho NP_859554.1 24450 D 235279 CDS NP_859555.1 32265523 1493179 25751..26494 1 NC_004917.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; glutamate racemase 26494 murI 1493179 murI Helicobacter hepaticus ATCC 51449 glutamate racemase NP_859555.1 25751 D 235279 CDS NP_859556.1 32265524 1493180 complement(26504..28696) 1 NC_004917.1 similar to Helicobacter pylori HP1089; hypothetical protein 28696 1493180 HH0025 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859556.1 26504 R 235279 CDS NP_859557.1 32265525 1493181 complement(28808..30766) 1 NC_004917.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; transketolase 30766 tktA 1493181 tktA Helicobacter hepaticus ATCC 51449 transketolase NP_859557.1 28808 R 235279 CDS NP_859558.1 32265526 1493182 complement(30801..33206) 1 NC_004917.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; phenylalanyl-tRNA synthetase subunit beta 33206 pheT 1493182 pheT Helicobacter hepaticus ATCC 51449 phenylalanyl-tRNA synthetase subunit beta NP_859558.1 30801 R 235279 CDS NP_859559.1 32265527 1493183 complement(33206..34207) 1 NC_004917.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a heterotetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 1 subfamily; phenylalanyl-tRNA synthetase subunit alpha 34207 pheS 1493183 pheS Helicobacter hepaticus ATCC 51449 phenylalanyl-tRNA synthetase subunit alpha NP_859559.1 33206 R 235279 CDS NP_859560.1 32265528 1493184 34349..34690 1 NC_004917.1 HIT hydrolase 34690 1493184 HH0029 Helicobacter hepaticus ATCC 51449 HIT hydrolase NP_859560.1 34349 D 235279 CDS NP_859561.1 32265529 1493185 34762..35346 1 NC_004917.1 similar to methyltransferases involved in tellurite resistance; hypothetical protein 35346 tehB 1493185 tehB Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859561.1 34762 D 235279 CDS NP_859562.1 32265530 1493186 35415..36701 1 NC_004917.1 possible cation efflux pump; hypothetical protein 36701 1493186 HH0031 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859562.1 35415 D 235279 CDS NP_859563.1 32265531 1493788 complement(37157..37594) 1 NC_004917.1 hypothetical protein 37594 1493788 HH0032 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859563.1 37157 R 235279 CDS NP_859564.1 32265532 1493789 complement(37606..39801) 1 NC_004917.1 ferrous ion uptake system protein 39801 feoB 1493789 feoB Helicobacter hepaticus ATCC 51449 ferrous ion uptake system protein NP_859564.1 37606 R 235279 CDS NP_859565.1 32265533 1493790 complement(39885..41126) 1 NC_004917.1 predicted secreted protein; hypothetical protein 41126 1493790 HH0034 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859565.1 39885 R 235279 CDS NP_859566.1 32265534 1493791 complement(41136..41969) 1 NC_004917.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; pantoate--beta-alanine ligase 41969 panC 1493791 panC Helicobacter hepaticus ATCC 51449 pantoate--beta-alanine ligase NP_859566.1 41136 R 235279 CDS NP_859567.1 32265535 1493792 complement(42006..42707) 1 NC_004917.1 OMP decarboxylase; OMPDCase; OMPdecase; type 1 subfamily; involved in last step of pyrimidine biosynthesis; converts orotidine 5'-phosphate to UMP and carbon dioxide; OMP decarboxylase; OMPDCase; OMPdecase; orotidine 5'-phosphate decarboxylase 42707 pyrF 1493792 pyrF Helicobacter hepaticus ATCC 51449 orotidine 5'-phosphate decarboxylase NP_859567.1 42006 R 235279 CDS NP_859568.1 32265536 1493793 complement(42708..43181) 1 NC_004917.1 Regulates rRNA biosynthesis by transcriptional antitermination; transcription antitermination protein NusB 43181 nusB 1493793 nusB Helicobacter hepaticus ATCC 51449 transcription antitermination protein NusB NP_859568.1 42708 R 235279 CDS NP_859569.1 32265537 1493794 complement(43192..43662) 1 NC_004917.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; 6,7-dimethyl-8-ribityllumazine synthase 43662 ribH 1493794 ribH Helicobacter hepaticus ATCC 51449 6,7-dimethyl-8-ribityllumazine synthase NP_859569.1 43192 R 235279 CDS NP_859570.1 32265538 1493795 complement(43692..44504) 1 NC_004917.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; 2-dehydro-3-deoxyphosphooctonate aldolase 44504 kdsA 1493795 kdsA Helicobacter hepaticus ATCC 51449 2-dehydro-3-deoxyphosphooctonate aldolase NP_859570.1 43692 R 235279 CDS NP_859571.1 32265539 1493796 complement(44515..45162) 1 NC_004917.1 carbonic anhydrase 45162 icfA 1493796 icfA Helicobacter hepaticus ATCC 51449 carbonic anhydrase NP_859571.1 44515 R 235279 CDS NP_859572.1 32265540 1493797 45310..45990 1 NC_004917.1 predicted membrane-associated; hypothetical protein 45990 1493797 HH0041 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859572.1 45310 D 235279 CDS NP_859573.1 32265541 1493798 complement(46021..46497) 1 NC_004917.1 ankyrin repeat-containing protein 46497 yahD 1493798 yahD Helicobacter hepaticus ATCC 51449 ankyrin repeat-containing protein NP_859573.1 46021 R 235279 CDS NP_859574.1 32265542 1493799 complement(46498..47934) 1 NC_004917.1 catalase 47934 katA 1493799 katA Helicobacter hepaticus ATCC 51449 catalase NP_859574.1 46498 R 235279 CDS NP_859575.1 32265543 1493800 48104..48688 1 NC_004917.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; GTP cyclohydrolase II 48688 ribA 1493800 ribA Helicobacter hepaticus ATCC 51449 GTP cyclohydrolase II NP_859575.1 48104 D 235279 CDS NP_859576.1 32265544 1493801 48725..49975 1 NC_004917.1 molybdopterin biosynthesis enzyme 49975 moeA_1 1493801 moeA_1 Helicobacter hepaticus ATCC 51449 molybdopterin biosynthesis enzyme NP_859576.1 48725 D 235279 CDS NP_859577.1 32265545 1493802 50021..50245 1 NC_004917.1 small subunit; molybdopterin converting factor 50245 moaD 1493802 moaD Helicobacter hepaticus ATCC 51449 molybdopterin converting factor NP_859577.1 50021 D 235279 CDS NP_859578.1 32265546 1493803 50233..50706 1 NC_004917.1 large subunit; molybdopterin converting factor 50706 moaE 1493803 moaE Helicobacter hepaticus ATCC 51449 molybdopterin converting factor NP_859578.1 50233 D 235279 CDS NP_859579.1 32265547 1493804 50690..51253 1 NC_004917.1 molybdopterin-guanine dinucleotide biosynthesis protein MobB 51253 mobB 1493804 mobB Helicobacter hepaticus ATCC 51449 molybdopterin-guanine dinucleotide biosynthesis protein MobB NP_859579.1 50690 D 235279 CDS NP_859580.1 32265548 1493805 51253..51792 1 NC_004917.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MogA 51792 mogA 1493805 mogA Helicobacter hepaticus ATCC 51449 molybdenum cofactor biosynthesis protein MogA NP_859580.1 51253 D 235279 CDS NP_859581.1 32265549 1493806 51968..55228 1 NC_004917.1 hypothetical protein 55228 1493806 HH0050 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859581.1 51968 D 235279 CDS NP_859582.1 32265550 1493807 complement(55394..56263) 1 NC_004917.1 hypothetical protein 56263 1493807 HH0051 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859582.1 55394 R 235279 CDS NP_859583.1 32265551 1493808 56477..56956 1 NC_004917.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; molybdenum cofactor biosynthesis protein MoaC 56956 moaC 1493808 moaC Helicobacter hepaticus ATCC 51449 molybdenum cofactor biosynthesis protein MoaC NP_859583.1 56477 D 235279 CDS NP_859584.1 32265552 1493809 56957..58327 1 NC_004917.1 similar to Vibrio cholerae VC0082; predicted secreted protein; hypothetical protein 58327 1493809 HH0053 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859584.1 56957 D 235279 CDS NP_859585.1 32265553 1493810 complement(58324..59910) 1 NC_004917.1 similar to Yersinia pestis YPO2377; predicted membrane-associated; hypothetical protein 59910 1493810 HH0054 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859585.1 58324 R 235279 CDS NP_859586.1 32265554 1493811 complement(59970..60287) 1 NC_004917.1 thioredoxin 60287 trxA_2 1493811 trxA_2 Helicobacter hepaticus ATCC 51449 thioredoxin NP_859586.1 59970 R 235279 CDS NP_859587.1 32265555 1493812 60643..61803 1 NC_004917.1 Ni/Fe hydrogenase beta subunit 61803 hyaA 1493812 hyaA Helicobacter hepaticus ATCC 51449 Ni/Fe hydrogenase beta subunit NP_859587.1 60643 D 235279 CDS NP_859588.1 32265556 1493813 61814..63544 1 NC_004917.1 Ni/Fe hydrogenase alpha subunit 63544 hyaB 1493813 hyaB Helicobacter hepaticus ATCC 51449 Ni/Fe hydrogenase alpha subunit NP_859588.1 61814 D 235279 CDS NP_859589.1 32265557 1493814 63555..64319 1 NC_004917.1 Ni/Fe hydrogenase cytochrome b subunit 64319 hyaC 1493814 hyaC Helicobacter hepaticus ATCC 51449 Ni/Fe hydrogenase cytochrome b subunit NP_859589.1 63555 D 235279 CDS NP_859590.1 32265558 1493815 64327..64866 1 NC_004917.1 hydrogenase formation/expression protease HyaD/HupD 64866 hyaD 1493815 hyaD Helicobacter hepaticus ATCC 51449 hydrogenase formation/expression protease HyaD/HupD NP_859590.1 64327 D 235279 CDS NP_859591.1 32265559 1493816 64863..66656 1 NC_004917.1 hypothetical protein 66656 1493816 HH0060 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859591.1 64863 D 235279 CDS NP_859592.1 32265560 1493817 66709..67479 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 67479 1493817 HH0061 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859592.1 66709 D 235279 CDS NP_859593.1 32265561 1493818 67490..68641 1 NC_004917.1 cystathionine gamma-synthase 68641 metB 1493818 metB Helicobacter hepaticus ATCC 51449 cystathionine gamma-synthase NP_859593.1 67490 D 235279 CDS NP_859594.1 32265562 1493819 68643..69584 1 NC_004917.1 cysteine synthase 69584 cysK_1 1493819 cysK_1 Helicobacter hepaticus ATCC 51449 cysteine synthase NP_859594.1 68643 D 235279 CDS NP_859595.1 32265563 1493820 complement(69562..70341) 1 NC_004917.1 similar to Bacteroides fragilis glycosyl transferase; hypothetical protein 70341 1493820 HH0064 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859595.1 69562 R 235279 CDS NP_859596.1 32265564 1493821 complement(70335..70496) 1 NC_004917.1 hypothetical protein 70496 1493821 HH0065 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859596.1 70335 R 235279 CDS NP_859597.1 32265565 1493822 70592..71065 1 NC_004917.1 similar to sugar transferase; may become fused with HH0067 due to slipped strand mispairing; hypothetical protein 71065 1493822 HH0066 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859597.1 70592 D 235279 CDS NP_859598.1 32265566 1493823 71217..71825 1 NC_004917.1 similar to sugar transferase; may become fused with HH0066 due to slipped strand misparing; hypothetical protein 71825 1493823 HH0067 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859598.1 71217 D 235279 CDS NP_859599.1 32265567 1493824 complement(71863..72771) 1 NC_004917.1 similar to Streptococcus gordonii probable glycosyl transferase; hypothetical protein 72771 1493824 HH0068 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859599.1 71863 R 235279 CDS NP_859600.1 32265568 1493825 complement(72768..73244) 1 NC_004917.1 may become fused with HH0070 due to slipped strand mispairing; alpha-1,2-fucosyltransferase fragment 73244 1493825 HH0069 Helicobacter hepaticus ATCC 51449 alpha-1,2-fucosyltransferase fragment NP_859600.1 72768 R 235279 CDS NP_859601.1 32265569 1493826 complement(73214..73666) 1 NC_004917.1 may become fused with HH0069 due to slipped strand mispairing; alpha-1,2-fucosyltransferase fragment 73666 1493826 HH0070 Helicobacter hepaticus ATCC 51449 alpha-1,2-fucosyltransferase fragment NP_859601.1 73214 R 235279 CDS NP_859602.1 32265570 1493827 complement(73683..74780) 1 NC_004917.1 predicted aminotransferase; hypothetical protein 74780 1493827 HH0071 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859602.1 73683 R 235279 CDS NP_859603.1 32265571 1493828 complement(74801..75763) 1 NC_004917.1 predicted fucosyltransferase; hypothetical protein 75763 1493828 HH0072 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859603.1 74801 R 235279 CDS NP_859604.1 32265572 1493829 complement(75766..76854) 1 NC_004917.1 predicted glycosyltransferase; hypothetical protein 76854 1493829 HH0073 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859604.1 75766 R 235279 CDS NP_859605.1 32265573 1493830 complement(76926..77558) 1 NC_004917.1 possibly related to methylase involved in ubiquinone/menaquinone biosynthesis; cyclopropane fatty acid synthase and related methyltransferases; hypothetical protein 77558 cfa 1493830 cfa Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859605.1 76926 R 235279 CDS NP_859606.1 32265574 1493831 complement(77551..78276) 1 NC_004917.1 aspartate racemase 78276 ygeA 1493831 ygeA Helicobacter hepaticus ATCC 51449 aspartate racemase NP_859606.1 77551 R 235279 CDS NP_859607.1 32265575 1493832 complement(78397..79212) 1 NC_004917.1 similar to Salmonella typhi methyltransferase; hypothetical protein 79212 1493832 HH0076 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859607.1 78397 R 235279 CDS NP_859608.1 32265576 1493833 complement(79209..79850) 1 NC_004917.1 predicted secreted protein; hypothetical protein 79850 1493833 HH0077 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859608.1 79209 R 235279 CDS NP_859609.1 32265577 1493834 complement(79823..80422) 1 NC_004917.1 phosphoserine phosphatase 80422 serB 1493834 serB Helicobacter hepaticus ATCC 51449 phosphoserine phosphatase NP_859609.1 79823 R 235279 CDS NP_859610.1 32265578 1493835 complement(80419..81888) 1 NC_004917.1 hypothetical protein 81888 1493835 HH0079 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859610.1 80419 R 235279 CDS NP_859611.1 32265579 1493836 complement(81950..83107) 1 NC_004917.1 hypothetical protein 83107 1493836 HH0080 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859611.1 81950 R 235279 CDS NP_859612.1 32265580 1493837 complement(83104..84057) 1 NC_004917.1 similar to glycosyltransferases; hypothetical protein 84057 1493837 HH0081 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859612.1 83104 R 235279 CDS NP_859613.1 32265581 1493838 complement(84050..84868) 1 NC_004917.1 UDP-N-acetylglucosamine 2-epimerase 84868 1493838 HH0082 Helicobacter hepaticus ATCC 51449 UDP-N-acetylglucosamine 2-epimerase NP_859613.1 84050 R 235279 CDS NP_859614.1 32265582 1493839 complement(85287..86021) 1 NC_004917.1 hypothetical protein 86021 1493839 HH0083 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859614.1 85287 R 235279 CDS NP_859615.1 32265583 1493840 complement(86018..87661) 1 NC_004917.1 similar to Campylobacter jejuni CJ1302; hypothetical protein 87661 1493840 HH0084 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859615.1 86018 R 235279 CDS NP_859616.1 32265584 1493841 complement(87674..87772) 1 NC_004917.1 similar to Campylobacter jejuni CJ1301; may become fused with HH0086 due to slipped strand mispairing; hypothetical protein 87772 1493841 HH0085 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859616.1 87674 R 235279 CDS NP_859617.1 32265585 1493842 complement(87774..88088) 1 NC_004917.1 similar to Campylobacter jejuni CJ1301; may become fused with HH0085 due to slipped strand mispairing; hypothetical protein 88088 1493842 HH0086 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859617.1 87774 R 235279 CDS NP_859618.1 32265586 1493843 complement(88088..88342) 1 NC_004917.1 acyl carrier protein 88342 1493843 HH0087 Helicobacter hepaticus ATCC 51449 acyl carrier protein NP_859618.1 88088 R 235279 CDS NP_859619.1 32265587 1493844 complement(88345..88917) 1 NC_004917.1 hypothetical protein 88917 1493844 HH0088 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859619.1 88345 R 235279 CDS NP_859620.1 32265588 1493845 complement(88914..89876) 1 NC_004917.1 hypothetical protein 89876 1493845 HH0089 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859620.1 88914 R 235279 CDS NP_859621.1 32265589 1493846 complement(89982..91340) 1 NC_004917.1 similar to Haemophilus influenzae O-succinylbenzoate-CoA ligase; hypothetical protein 91340 1493846 HH0090 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859621.1 89982 R 235279 CDS NP_859622.1 32265590 1493847 complement(91340..92851) 1 NC_004917.1 hypothetical protein 92851 1493847 HH0091 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859622.1 91340 R 235279 CDS NP_859623.1 32265591 1493848 complement(92844..93578) 1 NC_004917.1 similar to Escherichia coli 3-oxoacyl-[acyl-carrier-protein] reductase; 3-oxoacyl-ACP reductase 93578 1493848 HH0092 Helicobacter hepaticus ATCC 51449 3-oxoacyl-ACP reductase NP_859623.1 92844 R 235279 CDS NP_859624.1 32265592 1493849 complement(93571..93864) 1 NC_004917.1 hypothetical protein 93864 1493849 HH0093 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859624.1 93571 R 235279 CDS NP_859625.1 32265593 1493850 complement(93865..94428) 1 NC_004917.1 hypothetical protein 94428 1493850 HH0094 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859625.1 93865 R 235279 CDS NP_859626.1 32265594 1493851 complement(94428..94991) 1 NC_004917.1 similar to Campylobacter jejuni acetyl transferase; hypothetical protein 94991 1493851 HH0095 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859626.1 94428 R 235279 CDS NP_859627.1 32265595 1493852 95258..95704 1 NC_004917.1 hypothetical protein 95704 1493852 HH0096 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859627.1 95258 D 235279 CDS NP_859628.1 32265596 1493853 95714..96115 1 NC_004917.1 hypothetical protein 96115 1493853 HH0097 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859628.1 95714 D 235279 CDS NP_859629.1 32265597 1493854 complement(96474..97508) 1 NC_004917.1 molybdenum cofactor biosynthesis protein A 97508 1493854 HH0098 Helicobacter hepaticus ATCC 51449 molybdenum cofactor biosynthesis protein A NP_859629.1 96474 R 235279 CDS NP_859630.1 32265598 1493855 complement(97587..98618) 1 NC_004917.1 dTDP-D-glucose 4,6-dehydratase 98618 1493855 HH0099 Helicobacter hepaticus ATCC 51449 dTDP-D-glucose 4,6-dehydratase NP_859630.1 97587 R 235279 CDS NP_859631.1 32265599 1493856 complement(98618..99493) 1 NC_004917.1 similar to Campylobacter jejuni glucose-1-phosphate thymidyltransferase; hypothetical protein 99493 1493856 HH0100 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859631.1 98618 R 235279 CDS NP_859632.1 32265600 1493857 complement(99550..101364) 1 NC_004917.1 binds to the ribosome on the universally-conserved alpha-sarcin loop; GTP-binding protein LepA 101364 lepA 1493857 lepA Helicobacter hepaticus ATCC 51449 GTP-binding protein LepA NP_859632.1 99550 R 235279 CDS NP_859633.1 32265601 1493858 101556..102716 1 NC_004917.1 cell division protein FtsW 102716 ftsW_2 1493858 ftsW_2 Helicobacter hepaticus ATCC 51449 cell division protein FtsW NP_859633.1 101556 D 235279 CDS NP_859634.1 32265602 1493859 102730..103248 1 NC_004917.1 predicted membrane-associated; hypothetical protein 103248 1493859 HH0103 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859634.1 102730 D 235279 CDS NP_859635.1 32265603 1493860 103256..103996 1 NC_004917.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; uroporphyrinogen-III synthase 103996 hemD 1493860 hemD Helicobacter hepaticus ATCC 51449 uroporphyrinogen-III synthase NP_859635.1 103256 D 235279 CDS NP_859636.1 32265604 1493861 104073..104903 1 NC_004917.1 possible parvulin-like peptidyl-prolyl isomerase; hypothetical protein 104903 1493861 HH0105 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859636.1 104073 D 235279 CDS NP_859637.1 32265605 1493862 104932..105855 1 NC_004917.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; fructose-bisphosphate aldolase 105855 fba 1493862 fba Helicobacter hepaticus ATCC 51449 fructose-bisphosphate aldolase NP_859637.1 104932 D 235279 CDS NP_859638.1 32265606 1493863 105950..106111 1 NC_004917.1 hypothetical protein 106111 1493863 HH0107 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859638.1 105950 D 235279 CDS NP_859639.1 32265607 1493864 106199..106762 1 NC_004917.1 Involved in peptide bond synthesis; alters the affinity of the ribosome for aminoacyl-tRNA; elongation factor P 106762 efp 1493864 efp Helicobacter hepaticus ATCC 51449 elongation factor P NP_859639.1 106199 D 235279 CDS NP_859640.1 32265608 1493865 complement(106821..109400) 1 NC_004917.1 ATP-binding subunit; ATP-dependent Clp protease ClpA 109400 clpA 1493865 clpA Helicobacter hepaticus ATCC 51449 ATP-dependent Clp protease ClpA NP_859640.1 106821 R 235279 CDS NP_859641.1 32265609 1493866 complement(109547..110977) 1 NC_004917.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; tRNA modification GTPase TrmE 110977 trmE 1493866 trmE Helicobacter hepaticus ATCC 51449 tRNA modification GTPase TrmE NP_859641.1 109547 R 235279 CDS NP_859642.1 32265610 1493867 complement(110913..111719) 1 NC_004917.1 hypothetical protein 111719 1493867 HH0111 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859642.1 110913 R 235279 CDS NP_859643.1 32265611 1493868 complement(111722..113497) 1 NC_004917.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; inner membrane protein translocase component YidC 113497 1493868 HH0112 Helicobacter hepaticus ATCC 51449 inner membrane protein translocase component YidC NP_859643.1 111722 R 235279 CDS NP_859644.1 32265612 1493869 complement(113502..113771) 1 NC_004917.1 hypothetical protein 113771 1493869 HH0113 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859644.1 113502 R 235279 CDS NP_859645.1 32265613 1493870 113789..113959 1 NC_004917.1 hypothetical protein 113959 1493870 HH0114 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859645.1 113789 D 235279 CDS NP_859646.1 32265614 1493871 complement(113886..114326) 1 NC_004917.1 protein component; ribonuclease P 114326 rnpA 1493871 rnpA Helicobacter hepaticus ATCC 51449 ribonuclease P NP_859646.1 113886 R 235279 CDS NP_859647.1 32265615 1493872 complement(114350..114484) 1 NC_004917.1 in Escherichia coli transcription of this gene is enhanced by polyamines; 50S ribosomal protein L34 114484 rpmH 1493872 rpmH Helicobacter hepaticus ATCC 51449 50S ribosomal protein L34 NP_859647.1 114350 R 235279 CDS NP_859648.1 32265616 1493873 complement(114544..115260) 1 NC_004917.1 predicted secreted protein; hypothetical protein 115260 1493873 HH0117 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859648.1 114544 R 235279 CDS NP_859649.1 32265617 1493874 complement(115267..117186) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 117186 1493874 HH0118 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859649.1 115267 R 235279 CDS NP_859650.1 32265618 1493875 complement(117208..117588) 1 NC_004917.1 ExbD-like; biopolymer transport protein 117588 1493875 HH0119 Helicobacter hepaticus ATCC 51449 biopolymer transport protein NP_859650.1 117208 R 235279 CDS NP_859651.1 32265619 1493876 complement(117585..118037) 1 NC_004917.1 ExbB-like; biopolymer transport protein 118037 1493876 HH0120 Helicobacter hepaticus ATCC 51449 biopolymer transport protein NP_859651.1 117585 R 235279 CDS NP_859652.1 32265620 1493877 complement(118056..118523) 1 NC_004917.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; SsrA-binding protein 118523 smpB 1493877 smpB Helicobacter hepaticus ATCC 51449 SsrA-binding protein NP_859652.1 118056 R 235279 CDS NP_859653.1 32265621 1493878 complement(118525..119205) 1 NC_004917.1 catalyzes the phosphorylation of 4-diphosphocytidyl-2-C-methyl-D-erythritol in the nonmevalonate pathway of isoprenoid biosynthesis; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 119205 1493878 HH0122 Helicobacter hepaticus ATCC 51449 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase NP_859653.1 118525 R 235279 CDS NP_859654.1 32265622 1493879 complement(119335..119574) 1 NC_004917.1 affects carbohydrate metabolism, has regulatory role in many processes; carbon storage regulator 119574 1493879 HH0123 Helicobacter hepaticus ATCC 51449 carbon storage regulator NP_859654.1 119335 R 235279 CDS NP_859655.1 32265623 1493880 complement(119546..120400) 1 NC_004917.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; tRNA pseudouridine synthase B 120400 truB 1493880 truB Helicobacter hepaticus ATCC 51449 tRNA pseudouridine synthase B NP_859655.1 119546 R 235279 CDS NP_859656.1 32265624 1493881 complement(120463..121524) 1 NC_004917.1 predicted secreted protein; hypothetical protein 121524 1493881 HH0125 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859656.1 120463 R 235279 CDS NP_859657.1 32265625 1493882 complement(121531..122391) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 122391 1493882 HH0126 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859657.1 121531 R 235279 CDS NP_859658.1 32265626 1493883 complement(122388..122885) 1 NC_004917.1 HIT family; hypothetical protein 122885 1493883 HH0127 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859658.1 122388 R 235279 CDS NP_859659.1 32265627 1493884 complement(122898..124379) 1 NC_004917.1 similar to Campylobacter jejuni UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate ligase; hypothetical protein 124379 1493884 HH0128 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859659.1 122898 R 235279 CDS NP_859660.1 32265628 1493885 complement(124390..124680) 1 NC_004917.1 possible acylphosphatase; hypothetical protein 124680 1493885 HH0129 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859660.1 124390 R 235279 CDS NP_859661.1 32265629 1493886 complement(124677..125282) 1 NC_004917.1 similar to Helicobacter pylori JHP0676; hypothetical protein 125282 1493886 HH0130 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859661.1 124677 R 235279 CDS NP_859662.1 32265630 1493887 complement(125433..126485) 1 NC_004917.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; D-alanyl-alanine synthetase A 126485 ddl 1493887 ddl Helicobacter hepaticus ATCC 51449 D-alanyl-alanine synthetase A NP_859662.1 125433 R 235279 CDS NP_859663.1 32265631 1493187 complement(126488..129319) 1 NC_004917.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 uvrA and 2 uvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by uvrB, the uvrA molecules dissociate; excinuclease ABC subunit A 129319 uvrA 1493187 uvrA Helicobacter hepaticus ATCC 51449 excinuclease ABC subunit A NP_859663.1 126488 R 235279 CDS NP_859664.1 32265632 1493188 complement(129365..129643) 1 NC_004917.1 predicted secreted protein; hypothetical protein 129643 1493188 HH0133 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859664.1 129365 R 235279 CDS NP_859665.1 32265633 1493189 129507..129629 1 NC_004917.1 hypothetical protein 129629 1493189 HH0134 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859665.1 129507 D 235279 CDS NP_859666.1 32265634 1493190 complement(129667..131247) 1 NC_004917.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; D-3-phosphoglycerate dehydrogenase 131247 serA 1493190 serA Helicobacter hepaticus ATCC 51449 D-3-phosphoglycerate dehydrogenase NP_859666.1 129667 R 235279 CDS NP_859667.1 32265635 1493191 complement(131269..131733) 1 NC_004917.1 similar to Helicobacter pylori HP0398; predicted secreted protein; hypothetical protein 131733 1493191 HH0136 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859667.1 131269 R 235279 CDS NP_859668.1 32265636 1493192 complement(131750..133408) 1 NC_004917.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; 30S ribosomal protein S1 133408 rpsA 1493192 rpsA Helicobacter hepaticus ATCC 51449 30S ribosomal protein S1 NP_859668.1 131750 R 235279 CDS NP_859669.1 32265637 1493193 complement(133502..134323) 1 NC_004917.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 134323 ispH 1493193 ispH Helicobacter hepaticus ATCC 51449 4-hydroxy-3-methylbut-2-enyl diphosphate reductase NP_859669.1 133502 R 235279 CDS NP_859670.1 32265638 1493194 complement(134313..135629) 1 NC_004917.1 catalyzes the formation of 5-O-(1-carboxyvinyl)-3-phosphoshikimate from phosphoenolpyruvate and 3-phosphoshikimate in tryptophan biosynthesis; 3-phosphoshikimate 1-carboxyvinyltransferase 135629 aroA 1493194 aroA Helicobacter hepaticus ATCC 51449 3-phosphoshikimate 1-carboxyvinyltransferase NP_859670.1 134313 R 235279 CDS NP_859671.1 32265639 1493195 complement(135696..136754) 1 NC_004917.1 two component system sensor kinase 136754 1493195 HH0140 Helicobacter hepaticus ATCC 51449 two component system sensor kinase NP_859671.1 135696 R 235279 CDS NP_859672.1 32265640 1493196 complement(136738..137121) 1 NC_004917.1 similar to Campylobacter jejuni CJ1463; hypothetical protein 137121 1493196 HH0141 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859672.1 136738 R 235279 CDS NP_859673.1 32265641 1493197 complement(137132..138178) 1 NC_004917.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; flagellar basal body P-ring biosynthesis protein FlgA 138178 flgI 1493197 flgI Helicobacter hepaticus ATCC 51449 flagellar basal body P-ring biosynthesis protein FlgA NP_859673.1 137132 R 235279 CDS NP_859674.1 32265642 1493198 complement(138399..139010) 1 NC_004917.1 similar to Helicobacter pylori JHP1024; predicted secreted protein; hypothetical protein 139010 1493198 HH0143 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859674.1 138399 R 235279 CDS NP_859675.1 32265643 1493199 complement(139010..139441) 1 NC_004917.1 hypothetical protein 139441 1493199 HH0144 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859675.1 139010 R 235279 CDS NP_859676.1 32265644 1493200 139588..139716 1 NC_004917.1 predicted secreted protein; hypothetical protein 139716 1493200 HH0145 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859676.1 139588 D 235279 CDS NP_859677.1 32265645 1493201 complement(139780..139878) 1 NC_004917.1 similar to Helicobacter pylori HP1515; hypothetical protein 139878 1493201 HH0146 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859677.1 139780 R 235279 CDS NP_859678.1 32265646 1493202 139870..141612 1 NC_004917.1 predicted secreted protein; hypothetical protein 141612 1493202 HH0147 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859678.1 139870 D 235279 CDS NP_859679.1 32265647 1493203 complement(141622..141951) 1 NC_004917.1 predicted secreted protein; hypothetical protein 141951 1493203 HH0148 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859679.1 141622 R 235279 CDS NP_859680.1 32265648 1493204 complement(141965..142582) 1 NC_004917.1 short form of enzyme; requires HisZ for function; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms heteromultimer of HisG and HisZ; ATP phosphoribosyltransferase 142582 hisG 1493204 hisG Helicobacter hepaticus ATCC 51449 ATP phosphoribosyltransferase NP_859680.1 141965 R 235279 CDS NP_859681.1 32265649 1493205 complement(142614..143234) 1 NC_004917.1 type III; catalyzes the formation of (R)-4'-phosphopantothenate from (R)-pantothenate in coenzyme A biosynthesis; type III pantothenate kinases are not subject to feedback inhibition from coenzyme A and have a high Km for ATP; pantothenate kinase 143234 1493205 HH0150 Helicobacter hepaticus ATCC 51449 pantothenate kinase NP_859681.1 142614 R 235279 CDS NP_859682.1 32265650 1493206 complement(143234..144259) 1 NC_004917.1 similar to Helicobacter pylori JHP0797; predicted secreted protein; hypothetical protein 144259 1493206 HH0151 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859682.1 143234 R 235279 CDS NP_859683.1 32265651 1493207 complement(144289..144942) 1 NC_004917.1 similar to Helicobacter pylori JHP0798; predicted membrane-associated; hypothetical protein 144942 1493207 HH0152 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859683.1 144289 R 235279 CDS NP_859684.1 32265652 1493208 complement(144953..145429) 1 NC_004917.1 catalyzes the formation of dUMP from dUTP; deoxyuridine 5'-triphosphate nucleotidohydrolase 145429 dut 1493208 dut Helicobacter hepaticus ATCC 51449 deoxyuridine 5'-triphosphate nucleotidohydrolase NP_859684.1 144953 R 235279 CDS NP_859685.1 32265653 1493209 complement(145433..145924) 1 NC_004917.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; transcription elongation factor GreA 145924 greA 1493209 greA Helicobacter hepaticus ATCC 51449 transcription elongation factor GreA NP_859685.1 145433 R 235279 CDS NP_859686.1 32265654 1493210 complement(146038..147339) 1 NC_004917.1 sodium/proline symporter 147339 putP 1493210 putP Helicobacter hepaticus ATCC 51449 sodium/proline symporter NP_859686.1 146038 R 235279 CDS NP_859687.1 32265655 1493211 complement(147609..151109) 1 NC_004917.1 similar to Campylobacter jejuni dehydrogenase CJ1505; hypothetical protein 151109 1493211 HH0156 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859687.1 147609 R 235279 CDS NP_859688.1 32265656 1493212 complement(151140..151235) 1 NC_004917.1 hypothetical protein 151235 1493212 HH0157 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859688.1 151140 R 235279 CDS NP_859689.1 32265657 1493213 151422..154235 1 NC_004917.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; nitrate reductase catalytic subunit 154235 napA 1493213 napA Helicobacter hepaticus ATCC 51449 nitrate reductase catalytic subunit NP_859689.1 151422 D 235279 CDS NP_859690.1 32265658 1493214 154245..155087 1 NC_004917.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; quinol dehydrogenase periplasmic component 155087 napG 1493214 napG Helicobacter hepaticus ATCC 51449 quinol dehydrogenase periplasmic component NP_859690.1 154245 D 235279 CDS NP_859691.1 32265659 1493215 155087..156016 1 NC_004917.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; quinol dehydrogenase membrane component 156016 napH 1493215 napH Helicobacter hepaticus ATCC 51449 quinol dehydrogenase membrane component NP_859691.1 155087 D 235279 CDS NP_859692.1 32265660 1493216 156013..156576 1 NC_004917.1 small subunit; periplasmic nitrate reductase 156576 napB 1493216 napB Helicobacter hepaticus ATCC 51449 periplasmic nitrate reductase NP_859692.1 156013 D 235279 CDS NP_859693.1 32265661 1493217 156588..157637 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein CJ0784; hypothetical protein 157637 1493217 HH0162 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859693.1 156588 D 235279 CDS NP_859694.1 32265662 1493218 157637..157996 1 NC_004917.1 periplasmic nitrate reductase component NapD 157996 napD 1493218 napD Helicobacter hepaticus ATCC 51449 periplasmic nitrate reductase component NapD NP_859694.1 157637 D 235279 CDS NP_859695.1 32265663 1493219 complement(158071..158463) 1 NC_004917.1 similar to Campylobacter jejuni CJ0465c; hypothetical protein 158463 1493219 HH0164 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859695.1 158071 R 235279 CDS NP_859696.1 32265664 1493220 complement(158583..159020) 1 NC_004917.1 similar to Helicobacter pylori HP1502; predicted membrane-associated; hypothetical protein 159020 1493220 HH0165 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859696.1 158583 R 235279 CDS NP_859697.1 32265665 1493221 159256..159708 1 NC_004917.1 similar to Campylobacter jejuni transcriptional regulator Cj0466; hypothetical protein 159708 1493221 HH0166 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859697.1 159256 D 235279 CDS NP_859698.1 32265666 1493222 complement(159703..161079) 1 NC_004917.1 possible cation efflux pump; hypothetical protein 161079 1493222 HH0167 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859698.1 159703 R 235279 CDS NP_859699.1 32265667 1493223 complement(161093..161818) 1 NC_004917.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; 3-deoxy-manno-octulosonate cytidylyltransferase 161818 kdsB 1493223 kdsB Helicobacter hepaticus ATCC 51449 3-deoxy-manno-octulosonate cytidylyltransferase NP_859699.1 161093 R 235279 CDS NP_859700.1 32265668 1493224 complement(161887..163098) 1 NC_004917.1 hypothetical protein 163098 1493224 HH0169 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859700.1 161887 R 235279 CDS NP_859701.1 32265669 1493225 163233..163412 1 NC_004917.1 predicted secreted protein; hypothetical protein 163412 1493225 HH0170 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859701.1 163233 D 235279 CDS NP_859702.1 32265670 1493226 163418..165418 1 NC_004917.1 predicted membrane-associated; hypothetical protein 165418 1493226 HH0171 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859702.1 163418 D 235279 CDS NP_859703.1 32265671 1493227 165492..166628 1 NC_004917.1 GDP-D-mannose dehydratase 166628 gmd 1493227 gmd Helicobacter hepaticus ATCC 51449 GDP-D-mannose dehydratase NP_859703.1 165492 D 235279 CDS NP_859704.1 32265672 1493228 166657..167700 1 NC_004917.1 similar to Campylobacter jejuni fucose synthetase; hypothetical protein 167700 1493228 HH0173 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859704.1 166657 D 235279 CDS NP_859705.1 32265673 1493229 complement(167702..170830) 1 NC_004917.1 possible cation efflux pump; hypothetical protein 170830 1493229 HH0174 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859705.1 167702 R 235279 CDS NP_859706.1 32265674 1493230 complement(170840..172021) 1 NC_004917.1 possible cation efflux pump; hypothetical protein 172021 1493230 HH0175 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859706.1 170840 R 235279 CDS NP_859707.1 32265675 1493231 complement(172273..172770) 1 NC_004917.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; S-ribosylhomocysteinase 172770 ygaG 1493231 ygaG Helicobacter hepaticus ATCC 51449 S-ribosylhomocysteinase NP_859707.1 172273 R 235279 CDS NP_859708.1 32265676 1493232 complement(172826..173260) 1 NC_004917.1 similar to Campylobacter jejuni membrane protein CJ0341c; hypothetical protein 173260 1493232 HH0177 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859708.1 172826 R 235279 CDS NP_859709.1 32265677 1493233 complement(173304..174239) 1 NC_004917.1 Involved in the metabolism of aromatic amino acids; 2-hydroxyacid dehydrogenase 174239 1493233 HH0178 Helicobacter hepaticus ATCC 51449 2-hydroxyacid dehydrogenase NP_859709.1 173304 R 235279 CDS NP_859710.1 32265678 1493234 174324..175166 1 NC_004917.1 catalyzes the phosphorylation of N-acetyl-L-glutamate to form N-acetyl-L-glutamate 5-phosphate; acetylglutamate kinase 175166 argB 1493234 argB Helicobacter hepaticus ATCC 51449 acetylglutamate kinase NP_859710.1 174324 D 235279 CDS NP_859711.1 32265679 1493235 175163..175642 1 NC_004917.1 similar to Helicobacter pylori JHP0087; hypothetical protein 175642 1493235 HH0180 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859711.1 175163 D 235279 CDS NP_859712.1 32265680 1493236 175658..175894 1 NC_004917.1 may become fused with HH0182 due to slipped strand mispairing; hypothetical protein 175894 1493236 HH0181 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859712.1 175658 D 235279 CDS NP_859713.1 32265681 1493237 175875..176456 1 NC_004917.1 may become fused with HH0181 due to slipped strand mispairing; hypothetical protein 176456 1493237 HH0182 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859713.1 175875 D 235279 CDS NP_859714.1 32265682 1493238 complement(176944..179181) 1 NC_004917.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 179181 flgE 1493238 flgE Helicobacter hepaticus ATCC 51449 flagellar hook protein FlgE NP_859714.1 176944 R 235279 CDS NP_859715.1 32265683 1493239 complement(179178..179999) 1 NC_004917.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; flagellar basal body rod modification protein 179999 flgD 1493239 flgD Helicobacter hepaticus ATCC 51449 flagellar basal body rod modification protein NP_859715.1 179178 R 235279 CDS NP_859716.1 32265684 1493240 complement(180021..181256) 1 NC_004917.1 hypothetical protein 181256 1493240 HH0185 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859716.1 180021 R 235279 CDS NP_859717.1 32265685 1493241 complement(181393..182301) 1 NC_004917.1 hypothetical protein 182301 1493241 HH0186 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859717.1 181393 R 235279 CDS NP_859718.1 32265686 1493242 complement(182568..183254) 1 NC_004917.1 similar to Neisseria meningitidis periplasmic protein; hypothetical protein 183254 1493242 HH0187 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859718.1 182568 R 235279 CDS NP_859719.1 32265687 1493243 complement(183254..184150) 1 NC_004917.1 predicted secreted protein; hypothetical protein 184150 1493243 HH0188 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859719.1 183254 R 235279 CDS NP_859720.1 32265688 1493244 complement(184273..185013) 1 NC_004917.1 predicted secreted protein; hypothetical protein 185013 1493244 HH0189 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859720.1 184273 R 235279 CDS NP_859721.1 32265689 1493245 complement(185029..185337) 1 NC_004917.1 predicted secreted protein; hypothetical protein 185337 1493245 HH0190 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859721.1 185029 R 235279 CDS NP_859722.1 32265690 1493246 185594..185716 1 NC_004917.1 predicted membrane-associated; hypothetical protein 185716 1493246 HH0191 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859722.1 185594 D 235279 CDS NP_859723.1 32265691 1493247 complement(185783..185908) 1 NC_004917.1 hypothetical protein 185908 1493247 HH0192 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859723.1 185783 R 235279 CDS NP_859724.2 161546635 1493248 complement(186061..186627) 1 NC_004917.1 Catalyzes the formation of dUTP from dCTP in thymidylate biosynthesis; deoxycytidine triphosphate deaminase 186627 dcd 1493248 dcd Helicobacter hepaticus ATCC 51449 deoxycytidine triphosphate deaminase NP_859724.2 186061 R 235279 CDS NP_859725.1 32265693 1493249 186721..187194 1 NC_004917.1 biotin carboxyl carrier protein 187194 accB 1493249 accB Helicobacter hepaticus ATCC 51449 biotin carboxyl carrier protein NP_859725.1 186721 D 235279 CDS NP_859726.1 32265694 1493250 187204..188568 1 NC_004917.1 biotin carboxylase; biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA; catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; biotin carboxylase 188568 accC 1493250 accC Helicobacter hepaticus ATCC 51449 biotin carboxylase NP_859726.1 187204 D 235279 CDS NP_859727.1 32265695 1493251 188600..189289 1 NC_004917.1 hypothetical protein 189289 1493251 HH0196 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859727.1 188600 D 235279 CDS NP_859728.1 32265696 1493252 189306..190484 1 NC_004917.1 predicted aminotransferase; hypothetical protein 190484 1493252 HH0197 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859728.1 189306 D 235279 CDS NP_859729.1 32265697 1493253 190571..192229 1 NC_004917.1 similar to Campylobacter jejuni small Ni/fe-hydrogenase CJ1399c; hypothetical protein 192229 1493253 HH0198 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859729.1 190571 D 235279 CDS NP_859730.1 32265698 1493254 192315..193118 1 NC_004917.1 hypothetical protein 193118 1493254 HH0199 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859730.1 192315 D 235279 CDS NP_859731.1 32265699 1493255 193150..193827 1 NC_004917.1 hypothetical protein 193827 1493255 HH0200 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859731.1 193150 D 235279 CDS NP_859732.1 32265700 1493256 194149..194658 1 NC_004917.1 predicted membrane-associated; hypothetical protein 194658 1493256 HH0201 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859732.1 194149 D 235279 CDS NP_859733.1 32265701 1493257 194663..195130 1 NC_004917.1 similar to tellurite resistance permeases; hypothetical protein 195130 1493257 HH0202 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859733.1 194663 D 235279 CDS NP_859734.1 32265702 1493258 complement(195137..196237) 1 NC_004917.1 UDP-galactopyranose mutase 196237 glf 1493258 glf Helicobacter hepaticus ATCC 51449 UDP-galactopyranose mutase NP_859734.1 195137 R 235279 CDS NP_859735.1 32265703 1493259 complement(196241..197284) 1 NC_004917.1 glycosyl transferase 197284 1493259 HH0204 Helicobacter hepaticus ATCC 51449 glycosyl transferase NP_859735.1 196241 R 235279 CDS NP_859736.1 32265704 1493260 complement(197365..198495) 1 NC_004917.1 glycosyl transferase 198495 1493260 HH0205 Helicobacter hepaticus ATCC 51449 glycosyl transferase NP_859736.1 197365 R 235279 CDS NP_859737.1 32265705 1493261 complement(198557..199489) 1 NC_004917.1 similar to Klebsiella pneumonia RFBC protein; hypothetical protein 199489 1493261 HH0206 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859737.1 198557 R 235279 CDS NP_859738.1 32265706 1493262 complement(199492..200310) 1 NC_004917.1 similar to Klebsiella pneumonia RFBC protein; hypothetical protein 200310 1493262 HH0207 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859738.1 199492 R 235279 CDS NP_859739.1 32265707 1493263 complement(200539..201606) 1 NC_004917.1 bifunctional enzyme DHBP synthase/GTP cyclohydrolase II; functions in riboflavin synthesis; converts GTP to 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine; converts ribulose 5-phopshate to 3,4-dihydroxy-2-butanone 4-phosphate; bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein 201606 1493263 HH0208 Helicobacter hepaticus ATCC 51449 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein NP_859739.1 200539 R 235279 CDS NP_859740.1 32265708 1493264 complement(201638..201745) 1 NC_004917.1 hypothetical protein 201745 1493264 HH0209 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859740.1 201638 R 235279 CDS NP_859741.1 32265709 1493265 complement(201766..202236) 1 NC_004917.1 starvation-inducible DNA-binding protein Dps 202236 dps 1493265 dps Helicobacter hepaticus ATCC 51449 starvation-inducible DNA-binding protein Dps NP_859741.1 201766 R 235279 CDS NP_859742.1 32265710 1493266 complement(202275..202397) 1 NC_004917.1 hypothetical protein 202397 1493266 HH0211 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859742.1 202275 R 235279 CDS NP_859743.1 32265711 1493267 203064..203540 1 NC_004917.1 hypothetical protein 203540 1493267 HH0212 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859743.1 203064 D 235279 CDS NP_859744.1 32265712 1493268 203584..204456 1 NC_004917.1 hypothetical protein 204456 1493268 HH0213 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859744.1 203584 D 235279 CDS NP_859745.1 32265713 1493269 complement(204449..205273) 1 NC_004917.1 hypothetical protein 205273 1493269 HH0214 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859745.1 204449 R 235279 CDS NP_859746.1 32265714 1493270 205388..205894 1 NC_004917.1 cytochrome c-type protein; hypothetical protein 205894 1493270 HH0215 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859746.1 205388 D 235279 CDS NP_859747.1 32265715 1493271 205917..206240 1 NC_004917.1 similar to Campylobacter jejuni periplasmic cytochrome c CJ1357c; hypothetical protein 206240 1493271 HH0216 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859747.1 205917 D 235279 CDS NP_859748.1 32265716 1493272 206284..207768 1 NC_004917.1 similar to cytochrome c-type proteins; hypothetical protein 207768 1493272 HH0217 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859748.1 206284 D 235279 CDS NP_859749.1 32265717 1493273 207823..207963 1 NC_004917.1 hypothetical protein 207963 1493273 HH0218 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859749.1 207823 D 235279 CDS NP_859750.1 32265718 1493274 208046..208870 1 NC_004917.1 hypothetical protein 208870 1493274 HH0219 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859750.1 208046 D 235279 CDS NP_859751.1 32265719 1493275 208882..209292 1 NC_004917.1 diacylglycerol kinase 209292 dgkA 1493275 dgkA Helicobacter hepaticus ATCC 51449 diacylglycerol kinase NP_859751.1 208882 D 235279 CDS NP_859752.1 32265720 1493276 complement(209299..210069) 1 NC_004917.1 predicted secreted protein; hypothetical protein 210069 1493276 HH0221 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859752.1 209299 R 235279 CDS NP_859753.1 32265721 1493277 complement(210145..213219) 1 NC_004917.1 similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefC; hypothetical protein 213219 1493277 HH0222 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859753.1 210145 R 235279 CDS NP_859754.1 32265722 1493278 complement(213219..213920) 1 NC_004917.1 similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefB; hypothetical protein 213920 1493278 HH0223 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859754.1 213219 R 235279 CDS NP_859755.1 32265723 1493279 complement(213939..215297) 1 NC_004917.1 similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefA; hypothetical protein 215297 1493279 HH0224 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859755.1 213939 R 235279 CDS NP_859756.1 32265724 1493280 complement(215394..216173) 1 NC_004917.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; formate dehydrogenase accessory protein 216173 fdhD 1493280 fdhD Helicobacter hepaticus ATCC 51449 formate dehydrogenase accessory protein NP_859756.1 215394 R 235279 CDS NP_859757.1 32265725 1493281 complement(216182..217156) 1 NC_004917.1 gamma subunit; formate dehydrogenase-N 217156 fdhC 1493281 fdhC Helicobacter hepaticus ATCC 51449 formate dehydrogenase-N NP_859757.1 216182 R 235279 CDS NP_859758.1 32265726 1493282 complement(217167..217796) 1 NC_004917.1 Fe-S-cluster-containing formate dehydrogenase component 1 217796 fdhB 1493282 fdhB Helicobacter hepaticus ATCC 51449 Fe-S-cluster-containing formate dehydrogenase component 1 NP_859758.1 217167 R 235279 CDS NP_859759.1 32265727 1493283 complement(217811..220057) 1 NC_004917.1 similar to Campylobacter jejuni formate dehydrogenase; iron-sulfur subunit; hypothetical protein 220057 1493283 HH0228 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859759.1 217811 R 235279 CDS NP_859760.1 32265728 1493284 complement(220079..220633) 1 NC_004917.1 similar to Campylobacter jejuni formate dehydrogenase; large subunit; hypothetical protein 220633 1493284 HH0229 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859760.1 220079 R 235279 CDS NP_859761.1 32265729 1493285 complement(220653..220868) 1 NC_004917.1 similar to Campylobacter jejuni possible periplasmic protein CJ1513c; hypothetical protein 220868 1493285 HH0230 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859761.1 220653 R 235279 CDS NP_859762.1 32265730 1493286 complement(220957..221601) 1 NC_004917.1 hypothetical protein 221601 1493286 HH0231 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859762.1 220957 R 235279 CDS NP_859763.1 32265731 1493287 complement(221601..223130) 1 NC_004917.1 similar to Campylobacter jejuni ferredoxin CJ1377c; hypothetical protein 223130 1493287 HH0232 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859763.1 221601 R 235279 CDS NP_859764.1 32265732 1493288 complement(223218..224198) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 224198 1493288 HH0233 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859764.1 223218 R 235279 CDS NP_859765.1 32265733 1493289 complement(224333..225118) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 225118 1493289 HH0234 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859765.1 224333 R 235279 CDS NP_859766.1 32265734 1493290 complement(225105..226610) 1 NC_004917.1 hypothetical protein 226610 1493290 HH0235 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859766.1 225105 R 235279 CDS NP_859767.1 32265735 1493291 complement(226607..227245) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 227245 1493291 HH0236 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859767.1 226607 R 235279 CDS NP_859768.1 32265736 1493292 complement(227242..228036) 1 NC_004917.1 hypothetical protein 228036 1493292 HH0237 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859768.1 227242 R 235279 CDS NP_859769.1 32265737 1493293 complement(228126..228986) 1 NC_004917.1 DNA adenine methylase 228986 1493293 HH0238 Helicobacter hepaticus ATCC 51449 DNA adenine methylase NP_859769.1 228126 R 235279 CDS NP_859770.1 32265738 1493294 complement(228983..229768) 1 NC_004917.1 type II restriction endonuclease 229768 1493294 HH0239 Helicobacter hepaticus ATCC 51449 type II restriction endonuclease NP_859770.1 228983 R 235279 CDS NP_859771.1 32265739 1493295 complement(229864..230250) 1 NC_004917.1 hypothetical protein 230250 1493295 HH0240 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859771.1 229864 R 235279 CDS NP_859772.1 32265740 1493296 complement(230306..231583) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 231583 1493296 HH0241 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859772.1 230306 R 235279 CDS NP_859773.1 32265741 1493297 complement(231618..234416) 1 NC_004917.1 hypothetical protein 234416 1493297 HH0242 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859773.1 231618 R 235279 CDS NP_859774.1 32265742 1493298 complement(234543..235052) 1 NC_004917.1 similar to Vibrio cholerae hcp protein VCA0017 and VC1415; hypothetical protein 235052 1493298 HH0243 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859774.1 234543 R 235279 CDS NP_859775.1 32265743 1493299 complement(235149..236144) 1 NC_004917.1 similar to Vibrio cholerae VCA0111; hypothetical protein 236144 1493299 HH0244 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859775.1 235149 R 235279 CDS NP_859776.1 32265744 1493300 complement(236141..237856) 1 NC_004917.1 similar to Vibrio cholerae VCA0110; hypothetical protein 237856 1493300 HH0245 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859776.1 236141 R 235279 CDS NP_859777.1 32265745 1493301 complement(237926..238315) 1 NC_004917.1 similar to Vibrio cholerae VCA0109; hypothetical protein 238315 1493301 HH0246 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859777.1 237926 R 235279 CDS NP_859778.1 32265746 1493302 complement(238319..239791) 1 NC_004917.1 similar to Vibrio cholerae VCA0108; hypothetical protein 239791 1493302 HH0247 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859778.1 238319 R 235279 CDS NP_859779.1 32265747 1493303 complement(239839..240336) 1 NC_004917.1 similar to Vibrio cholerae VCA0107; hypothetical protein 240336 1493303 HH0248 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859779.1 239839 R 235279 CDS NP_859780.1 32265748 1493304 240524..241060 1 NC_004917.1 similar to Vibrio cholerae VCA0113; hypothetical protein 241060 1493304 HH0249 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859780.1 240524 D 235279 CDS NP_859781.1 32265749 1493305 241053..242432 1 NC_004917.1 similar to Vibrio cholerae VCA0114; hypothetical protein 242432 1493305 HH0250 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859781.1 241053 D 235279 CDS NP_859782.1 32265750 1493306 242444..243232 1 NC_004917.1 similar to Vibrio cholerae VCA0115; hypothetical protein 243232 1493306 HH0251 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859782.1 242444 D 235279 CDS NP_859783.1 32265751 1493307 243237..246791 1 NC_004917.1 similar to Vibrio cholerae IcmF; VirB10-like protein; hypothetical protein 246791 1493307 HH0252 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859783.1 243237 D 235279 CDS NP_859784.1 32265752 1493308 246801..247781 1 NC_004917.1 hypothetical protein 247781 1493308 HH0253 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859784.1 246801 D 235279 CDS NP_859785.1 32265753 1493309 complement(247872..249140) 1 NC_004917.1 hypothetical protein 249140 1493309 HH0254 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859785.1 247872 R 235279 CDS NP_859786.1 32265754 1493310 complement(249168..253067) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 253067 1493310 HH0255 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859786.1 249168 R 235279 CDS NP_859787.1 32265755 1493311 complement(253173..254729) 1 NC_004917.1 hypothetical protein 254729 1493311 HH0256 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859787.1 253173 R 235279 CDS NP_859788.1 32265756 1493312 complement(254722..256059) 1 NC_004917.1 hypothetical protein 256059 1493312 HH0257 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859788.1 254722 R 235279 CDS NP_859789.1 32265757 1493313 complement(256069..256437) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 256437 1493313 HH0258 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859789.1 256069 R 235279 CDS NP_859790.1 32265758 1493314 complement(256448..257131) 1 NC_004917.1 hypothetical protein 257131 1493314 HH0259 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859790.1 256448 R 235279 CDS NP_859791.1 32265759 1493315 complement(257124..258914) 1 NC_004917.1 virB4-like protein; hypothetical protein 258914 1493315 HH0260 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859791.1 257124 R 235279 CDS NP_859792.1 32265760 1493316 complement(258911..259519) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 259519 1493316 HH0261 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859792.1 258911 R 235279 CDS NP_859793.1 32265761 1493317 complement(260339..260572) 1 NC_004917.1 hypothetical protein 260572 1493317 HH0262 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859793.1 260339 R 235279 CDS NP_859794.1 32265762 1493318 complement(260650..260802) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 260802 1493318 HH0263 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859794.1 260650 R 235279 CDS NP_859795.1 32265763 1493319 complement(260976..261083) 1 NC_004917.1 hypothetical protein 261083 1493319 HH0264 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859795.1 260976 R 235279 CDS NP_859796.1 32265764 1493320 261105..261455 1 NC_004917.1 hypothetical protein 261455 1493320 HH0265 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859796.1 261105 D 235279 CDS NP_859797.1 32265765 1493321 261497..262198 1 NC_004917.1 hypothetical protein 262198 1493321 HH0266 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859797.1 261497 D 235279 CDS NP_859798.1 32265766 1493322 262248..262463 1 NC_004917.1 predicted membrane-associated; hypothetical protein 262463 1493322 HH0267 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859798.1 262248 D 235279 CDS NP_859799.1 32265767 1493323 262472..262783 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 262783 1493323 HH0268 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859799.1 262472 D 235279 CDS NP_859800.1 32265768 1493324 complement(263405..264250) 1 NC_004917.1 integrase 264250 1493324 HH0269 Helicobacter hepaticus ATCC 51449 integrase NP_859800.1 263405 R 235279 CDS NP_859801.1 32265769 1493325 complement(264681..266786) 1 NC_004917.1 hypothetical protein 266786 1493325 HH0270 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859801.1 264681 R 235279 CDS NP_859802.1 32265770 1493326 266913..267017 1 NC_004917.1 hypothetical protein 267017 1493326 HH0271 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859802.1 266913 D 235279 CDS NP_859803.1 32265771 1493327 complement(267829..268335) 1 NC_004917.1 hypothetical protein 268335 1493327 HH0272 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859803.1 267829 R 235279 CDS NP_859804.1 32265772 1493154 complement(268350..268697) 1 NC_004917.1 hypothetical protein 268697 1493154 HH0273 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859804.1 268350 R 235279 CDS NP_859805.1 32265773 1493328 complement(268841..269578) 1 NC_004917.1 hypothetical protein 269578 1493328 HH0274 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859805.1 268841 R 235279 CDS NP_859806.1 32265774 1493329 270051..273479 1 NC_004917.1 virD4-like protein; hypothetical protein 273479 1493329 HH0275 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859806.1 270051 D 235279 CDS NP_859807.1 32265775 1493330 complement(273583..274074) 1 NC_004917.1 hypothetical protein 274074 1493330 HH0276 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859807.1 273583 R 235279 CDS NP_859808.1 32265776 1493331 274388..274930 1 NC_004917.1 hypothetical protein 274930 1493331 HH0277 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859808.1 274388 D 235279 CDS NP_859809.1 32265777 1493332 274985..275353 1 NC_004917.1 hypothetical protein 275353 1493332 HH0278 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859809.1 274985 D 235279 CDS NP_859810.1 32265778 1493333 275943..276164 1 NC_004917.1 hypothetical protein 276164 1493333 HH0279 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859810.1 275943 D 235279 CDS NP_859811.1 32265779 1493334 276333..277097 1 NC_004917.1 hypothetical protein 277097 1493334 HH0280 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859811.1 276333 D 235279 CDS NP_859812.1 32265780 1493335 complement(277272..277757) 1 NC_004917.1 hypothetical protein 277757 1493335 HH0281 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859812.1 277272 R 235279 CDS NP_859813.1 32265781 1493336 complement(277768..278403) 1 NC_004917.1 hypothetical protein 278403 1493336 HH0282 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859813.1 277768 R 235279 CDS NP_859814.1 32265782 1493337 complement(278548..278862) 1 NC_004917.1 hypothetical protein 278862 1493337 HH0283 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859814.1 278548 R 235279 CDS NP_859815.1 32265783 1493338 complement(279091..279288) 1 NC_004917.1 predicted secreted protein; hypothetical protein 279288 1493338 HH0284 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859815.1 279091 R 235279 CDS NP_859816.1 32265784 1493339 complement(279285..279725) 1 NC_004917.1 hypothetical protein 279725 1493339 HH0285 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859816.1 279285 R 235279 CDS NP_859817.1 32265785 1493340 complement(279845..279973) 1 NC_004917.1 hypothetical protein 279973 1493340 HH0286 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859817.1 279845 R 235279 CDS NP_859818.1 32265786 1493341 complement(280153..280551) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 280551 1493341 HH0287 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859818.1 280153 R 235279 CDS NP_859819.1 32265787 1493342 complement(280624..280926) 1 NC_004917.1 hypothetical protein 280926 1493342 HH0288 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859819.1 280624 R 235279 CDS NP_859820.1 32265788 1493343 complement(280975..282777) 1 NC_004917.1 hypothetical protein 282777 1493343 HH0289 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859820.1 280975 R 235279 CDS NP_859821.1 32265789 1493344 complement(282791..283441) 1 NC_004917.1 predicted secreted protein; hypothetical protein 283441 1493344 HH0290 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859821.1 282791 R 235279 CDS NP_859822.1 32265790 1493345 complement(283450..284859) 1 NC_004917.1 hypothetical protein 284859 1493345 HH0291 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859822.1 283450 R 235279 CDS NP_859823.1 32265791 1493346 complement(284856..285515) 1 NC_004917.1 hypothetical protein 285515 1493346 HH0292 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859823.1 284856 R 235279 CDS NP_859824.1 32265792 1493347 complement(285602..286213) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 286213 1493347 HH0293 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859824.1 285602 R 235279 CDS NP_859825.1 32265793 1493348 complement(286290..288848) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 288848 1493348 HH0294 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859825.1 286290 R 235279 CDS NP_859826.1 32265794 1493349 complement(288848..289528) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 289528 1493349 HH0295 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859826.1 288848 R 235279 CDS NP_859827.1 32265795 1493350 complement(289525..290304) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 290304 1493350 HH0296 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859827.1 289525 R 235279 CDS NP_859828.1 32265796 1493351 complement(290304..290471) 1 NC_004917.1 hypothetical protein 290471 1493351 HH0297 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859828.1 290304 R 235279 CDS NP_859829.1 32265797 1493352 complement(290468..291052) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 291052 1493352 HH0298 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859829.1 290468 R 235279 CDS NP_859830.1 32265798 1493353 complement(291049..291627) 1 NC_004917.1 hypothetical protein 291627 1493353 HH0299 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859830.1 291049 R 235279 CDS NP_859831.1 32265799 1493354 complement(291632..292222) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 292222 1493354 HH0300 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859831.1 291632 R 235279 CDS NP_859832.1 32265800 1493355 complement(292581..293294) 1 NC_004917.1 predicted secreted protein; hypothetical protein 293294 1493355 HH0301 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859832.1 292581 R 235279 CDS NP_859833.1 32265801 1493356 complement(293312..294244) 1 NC_004917.1 hypothetical protein 294244 1493356 HH0302 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859833.1 293312 R 235279 CDS NP_859834.1 32265802 1493357 complement(294424..295005) 1 NC_004917.1 para-aminobenzoate synthase glutamine amidotransferase component II 295005 trpG 1493357 trpG Helicobacter hepaticus ATCC 51449 para-aminobenzoate synthase glutamine amidotransferase component II NP_859834.1 294424 R 235279 CDS NP_859835.1 32265803 1493358 complement(295002..296852) 1 NC_004917.1 para-aminobenzoate synthase glutamine amidotransferase component I 296852 trpE_1 1493358 trpE_1 Helicobacter hepaticus ATCC 51449 para-aminobenzoate synthase glutamine amidotransferase component I NP_859835.1 295002 R 235279 CDS NP_859836.1 32265804 1493359 296981..299242 1 NC_004917.1 hypothetical protein 299242 1493359 HH0305 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859836.1 296981 D 235279 CDS NP_859837.1 32265805 1493360 complement(299258..302749) 1 NC_004917.1 acyl transferase; 2-acyl-glycerophospho-ethanolamine acyltransferase 302749 1493360 HH0306 Helicobacter hepaticus ATCC 51449 2-acyl-glycerophospho-ethanolamine acyltransferase NP_859837.1 299258 R 235279 CDS NP_859838.1 32265806 1493361 complement(302805..303746) 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 303746 1493361 HH0307 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859838.1 302805 R 235279 CDS NP_859839.1 32265807 1493362 complement(303836..304756) 1 NC_004917.1 Era; Escherichia coli Ras-like protein; Bex; Bacillus Era-complementing segment; essential protein in Escherichia coli that is involved in many cellular processes; GTPase; binds the cell membrane through apparent C-terminal domain; mutants are arrested during the cell cycle; Streptococcus pneumoniae Era binds to RNA and Escherichia coli Era binds 16S rRNA and 30S ribosome; GTP-binding protein Era 304756 era 1493362 era Helicobacter hepaticus ATCC 51449 GTP-binding protein Era NP_859839.1 303836 R 235279 CDS NP_859840.1 32265808 1493363 complement(304774..306108) 1 NC_004917.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease ATP-binding subunit HslU 306108 hslU 1493363 hslU Helicobacter hepaticus ATCC 51449 ATP-dependent protease ATP-binding subunit HslU NP_859840.1 304774 R 235279 CDS NP_859841.1 32265809 1493364 complement(306122..306664) 1 NC_004917.1 heat shock protein involved in degradation of misfolded proteins; ATP-dependent protease peptidase subunit 306664 hslV 1493364 hslV Helicobacter hepaticus ATCC 51449 ATP-dependent protease peptidase subunit NP_859841.1 306122 R 235279 CDS NP_859842.1 32265810 1493365 complement(306679..307122) 1 NC_004917.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; 50S ribosomal protein L9 307122 rplI 1493365 rplI Helicobacter hepaticus ATCC 51449 50S ribosomal protein L9 NP_859842.1 306679 R 235279 CDS NP_859843.1 32265811 1493366 307144..307872 1 NC_004917.1 hypothetical protein 307872 1493366 HH0312 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859843.1 307144 D 235279 CDS NP_859844.1 32265812 1493367 complement(307880..308833) 1 NC_004917.1 predicted secreted protein; hypothetical protein 308833 1493367 HH0313 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859844.1 307880 R 235279 CDS NP_859845.1 32265813 1493368 complement(308843..310447) 1 NC_004917.1 bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate; functions in tryptophan biosynthesis; bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase 310447 trpD 1493368 trpD Helicobacter hepaticus ATCC 51449 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase NP_859845.1 308843 R 235279 CDS NP_859846.1 32265814 1493369 complement(310451..311947) 1 NC_004917.1 anthranilate synthase component I 311947 trpE_2 1493369 trpE_2 Helicobacter hepaticus ATCC 51449 anthranilate synthase component I NP_859846.1 310451 R 235279 CDS NP_859847.1 32265815 1493370 complement(311978..312517) 1 NC_004917.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; outer-membrane lipoprotein carrier protein 312517 lolA 1493370 lolA Helicobacter hepaticus ATCC 51449 outer-membrane lipoprotein carrier protein NP_859847.1 311978 R 235279 CDS NP_859848.2 161546634 1493371 312635..315190 1 NC_004917.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; preprotein translocase subunit SecA 315190 secA 1493371 secA Helicobacter hepaticus ATCC 51449 preprotein translocase subunit SecA NP_859848.2 312635 D 235279 CDS NP_859849.1 32265817 1493372 315191..316444 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein CJ0941c; hypothetical protein 316444 1493372 HH0318 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859849.1 315191 D 235279 CDS NP_859850.1 32265818 1493373 316541..316792 1 NC_004917.1 possible RNA-binding protein with RRM domain; hypothetical protein 316792 1493373 HH0319 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859850.1 316541 D 235279 CDS NP_859851.1 32265819 1493374 complement(316796..317803) 1 NC_004917.1 hydrogenase isoenzyme formation protein 317803 hypE 1493374 hypE Helicobacter hepaticus ATCC 51449 hydrogenase isoenzyme formation protein NP_859851.1 316796 R 235279 CDS NP_859852.1 32265820 1493375 complement(317822..319504) 1 NC_004917.1 possible helicase subunit; hypothetical protein 319504 1493375 HH0321 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859852.1 317822 R 235279 CDS NP_859853.1 32265821 1493376 complement(319508..320650) 1 NC_004917.1 hydrogenase isoenzyme formation protein 320650 hypD 1493376 hypD Helicobacter hepaticus ATCC 51449 hydrogenase isoenzyme formation protein NP_859853.1 319508 R 235279 CDS NP_859854.1 32265822 1493377 complement(320643..321362) 1 NC_004917.1 similar to Helicobacter pylori lipopolysaccharide biosynthesis protein HP0805; hypothetical protein 321362 1493377 HH0323 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859854.1 320643 R 235279 CDS NP_859855.1 32265823 1493378 complement(321410..321670) 1 NC_004917.1 hydrogenase isoenzyme formation protein HypC 321670 hypC 1493378 hypC Helicobacter hepaticus ATCC 51449 hydrogenase isoenzyme formation protein HypC NP_859855.1 321410 R 235279 CDS NP_859856.1 32265824 1493379 complement(321680..322408) 1 NC_004917.1 hydrogenase expression/formation protein HypB 322408 hypB 1493379 hypB Helicobacter hepaticus ATCC 51449 hydrogenase expression/formation protein HypB NP_859856.1 321680 R 235279 CDS NP_859857.1 32265825 1493380 complement(322389..324812) 1 NC_004917.1 transcriptional regulatory protein HypF 324812 hypF 1493380 hypF Helicobacter hepaticus ATCC 51449 transcriptional regulatory protein HypF NP_859857.1 322389 R 235279 CDS NP_859858.1 32265826 1493381 324933..326141 1 NC_004917.1 Converts 3-phospho-D-glycerate to 3-phospho-D-glyceroyl phosphate during the glycolysis pathway; phosphoglycerate kinase 326141 pgk 1493381 pgk Helicobacter hepaticus ATCC 51449 phosphoglycerate kinase NP_859858.1 324933 D 235279 CDS NP_859859.1 32265827 1493382 326141..326944 1 NC_004917.1 similar to Campylobacter jejuni CJ1113; hypothetical protein 326944 1493382 HH0328 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859859.1 326141 D 235279 CDS NP_859860.1 32265828 1493383 327008..327319 1 NC_004917.1 may become fused with HH0330 due to slipped strand mispairing; hypothetical protein 327319 1493383 HH0329 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859860.1 327008 D 235279 CDS NP_859861.1 32265829 1493384 327409..327855 1 NC_004917.1 may become fused with HH0329 due to slipped strand mispairing; hypothetical protein 327855 1493384 HH0330 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859861.1 327409 D 235279 CDS NP_859862.1 32265830 1493385 327821..328333 1 NC_004917.1 Converts L-aspartate to beta-alanine and provides the major route of beta-alanine production in bacteria. Beta-alanine is essential for the biosynthesis of pantothenate (vitamin B5); aspartate alpha-decarboxylase 328333 panD 1493385 panD Helicobacter hepaticus ATCC 51449 aspartate alpha-decarboxylase NP_859862.1 327821 D 235279 CDS NP_859863.1 32265831 1493386 328336..328662 1 NC_004917.1 similar to Campylobacter jejuni CJ1642; hypothetical protein 328662 ybaB 1493386 ybaB Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859863.1 328336 D 235279 CDS NP_859864.1 32265832 1493387 328655..329722 1 NC_004917.1 similar to Helicobacter pylori HP0036; predicted secreted protein; hypothetical protein 329722 1493387 HH0333 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859864.1 328655 D 235279 CDS NP_859865.1 32265833 1493388 329731..330597 1 NC_004917.1 geranyltranstransferase 330597 ispA 1493388 ispA Helicobacter hepaticus ATCC 51449 geranyltranstransferase NP_859865.1 329731 D 235279 CDS NP_859866.1 32265834 1493389 330594..331388 1 NC_004917.1 catalyzes the conversion of a phosphate monoester to an alcohol and a phosphate; stationary phase survival protein SurE 331388 surE 1493389 surE Helicobacter hepaticus ATCC 51449 stationary phase survival protein SurE NP_859866.1 330594 D 235279 CDS NP_859867.1 32265835 1493390 331367..332068 1 NC_004917.1 similar to Helicobacter pylori JHP0692; MoeB/ThiF family; hypothetical protein 332068 1493390 HH0336 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859867.1 331367 D 235279 CDS NP_859868.1 32265836 1493391 332069..332203 1 NC_004917.1 similar to Helicobacter pylori JHP0693; hypothetical protein 332203 1493391 HH0337 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859868.1 332069 D 235279 CDS NP_859869.1 32265837 1493392 332213..333103 1 NC_004917.1 similar to Campylobacter jejuni hydrolase CJ0947c; hypothetical protein 333103 1493392 HH0338 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859869.1 332213 D 235279 CDS NP_859870.1 32265838 1493393 333211..333648 1 NC_004917.1 similar to Pseudomonas aeruginosa PA4578; predicted secreted protein; hypothetical protein 333648 1493393 HH0339 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859870.1 333211 D 235279 CDS NP_859871.1 32265839 1493394 333898..335715 1 NC_004917.1 similar to Pseudomonas aeruginosa PA4579; hypothetical protein 335715 1493394 HH0340 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859871.1 333898 D 235279 CDS NP_859872.1 32265840 1493395 complement(335719..336285) 1 NC_004917.1 similar to Campylobacter jejuni CJ1254; hypothetical protein 336285 1493395 HH0341 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859872.1 335719 R 235279 CDS NP_859873.1 32265841 1493396 complement(336269..336652) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 336652 1493396 HH0342 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859873.1 336269 R 235279 CDS NP_859874.1 32265842 1493397 complement(336655..336819) 1 NC_004917.1 predicted secreted protein; hypothetical protein 336819 1493397 HH0343 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859874.1 336655 R 235279 CDS NP_859875.1 32265843 1493398 336719..336928 1 NC_004917.1 predicted membrane-associated; hypothetical protein 336928 1493398 HH0344 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859875.1 336719 D 235279 CDS NP_859876.1 32265844 1493399 336946..337605 1 NC_004917.1 glutamine ABC transporter permease GlnP 337605 glnP 1493399 glnP Helicobacter hepaticus ATCC 51449 glutamine ABC transporter permease GlnP NP_859876.1 336946 D 235279 CDS NP_859877.1 32265845 1493400 337653..338261 1 NC_004917.1 similar to amino acid ABC transporter permeases; hypothetical protein 338261 1493400 HH0346 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859877.1 337653 D 235279 CDS NP_859878.1 32265846 1493401 338258..339010 1 NC_004917.1 similar to amino acid ABC transporter ATP binding components; hypothetical protein 339010 glnQ_1 1493401 glnQ_1 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859878.1 338258 D 235279 CDS NP_859879.1 32265847 1493402 complement(339007..339528) 1 NC_004917.1 hypothetical protein 339528 1493402 HH0348 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859879.1 339007 R 235279 CDS NP_859880.1 32265848 1493403 complement(339643..340623) 1 NC_004917.1 predicted secreted protein; hypothetical protein 340623 1493403 HH0349 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859880.1 339643 R 235279 CDS NP_859881.1 32265849 1493404 complement(340626..340967) 1 NC_004917.1 similar to Helicobacter pylori HP1414; hypothetical protein 340967 1493404 HH0350 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859881.1 340626 R 235279 CDS NP_859882.1 32265850 1493405 complement(340997..341653) 1 NC_004917.1 similar to Helicobacter pylori HP1337; hypothetical protein 341653 1493405 HH0351 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859882.1 340997 R 235279 CDS NP_859883.1 32265851 1493406 complement(341634..342065) 1 NC_004917.1 Inhibits transcription at high concentrations of nickel; nickel responsive regulator 342065 1493406 HH0352 Helicobacter hepaticus ATCC 51449 nickel responsive regulator NP_859883.1 341634 R 235279 CDS NP_859884.1 32265852 1493407 342217..342654 1 NC_004917.1 ExbB-like; biopolymer transport protein 342654 1493407 HH0353 Helicobacter hepaticus ATCC 51449 biopolymer transport protein NP_859884.1 342217 D 235279 CDS NP_859885.1 32265853 1493408 342657..343037 1 NC_004917.1 ExbD-like; biopolymer transport protein 343037 1493408 HH0354 Helicobacter hepaticus ATCC 51449 biopolymer transport protein NP_859885.1 342657 D 235279 CDS NP_859886.1 32265854 1493409 343003..343731 1 NC_004917.1 TonB-like protein 343731 1493409 HH0355 Helicobacter hepaticus ATCC 51449 TonB-like protein NP_859886.1 343003 D 235279 CDS NP_859887.1 32265855 1493410 complement(343753..344163) 1 NC_004917.1 hypothetical protein 344163 1493410 HH0356 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859887.1 343753 R 235279 CDS NP_859888.1 32265856 1493411 complement(344219..344506) 1 NC_004917.1 predicted secreted protein; hypothetical protein 344506 1493411 HH0357 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859888.1 344219 R 235279 CDS NP_859889.1 32265857 1493412 complement(344510..346588) 1 NC_004917.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; elongation factor G 346588 fusA 1493412 fusA Helicobacter hepaticus ATCC 51449 elongation factor G NP_859889.1 344510 R 235279 CDS NP_859890.1 32265858 1493413 complement(346604..347071) 1 NC_004917.1 binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit; 30S ribosomal protein S7 347071 rpsG 1493413 rpsG Helicobacter hepaticus ATCC 51449 30S ribosomal protein S7 NP_859890.1 346604 R 235279 CDS NP_859891.1 32265859 1493414 complement(347087..347476) 1 NC_004917.1 interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone; located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side; mutations in the S12 gene confer streptomycin resistance; 30S ribosomal protein S12 347476 rpsL 1493414 rpsL Helicobacter hepaticus ATCC 51449 30S ribosomal protein S12 NP_859891.1 347087 R 235279 CDS NP_859892.1 32265860 1493415 complement(347568..356252) 1 NC_004917.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; fusion of rpoB and rpoC; beta and beta' subunits are part of the catalytic core which binds with a sigma factor to produce the holoenzyme; DNA-directed RNA polymerase subunit beta/beta' 356252 rpoB 1493415 rpoB Helicobacter hepaticus ATCC 51449 DNA-directed RNA polymerase subunit beta/beta' NP_859892.1 347568 R 235279 CDS NP_859893.1 32265861 1493416 complement(356400..356780) 1 NC_004917.1 present in two forms; L12 is normal, while L7 is aminoacylated at the N-terminal serine; the only multicopy ribosomal protein; 4:1 ratio of L7/L12 per ribosome; two L12 dimers bind L10; critically important for translation efficiency and fidelity; stimulates GTPase activity of translation factors; 50S ribosomal protein L7/L12 356780 rplL 1493416 rplL Helicobacter hepaticus ATCC 51449 50S ribosomal protein L7/L12 NP_859893.1 356400 R 235279 CDS NP_859894.1 32265862 1493417 complement(356801..357283) 1 NC_004917.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; 50S ribosomal protein L10 357283 rplJ 1493417 rplJ Helicobacter hepaticus ATCC 51449 50S ribosomal protein L10 NP_859894.1 356801 R 235279 CDS NP_859895.1 32265863 1493418 complement(357374..358078) 1 NC_004917.1 in Escherichia coli and Methanococcus, this protein autoregulates expression; the binding site in the mRNA mimics the binding site in the 23S rRNA; 50S ribosomal protein L1 358078 rplA 1493418 rplA Helicobacter hepaticus ATCC 51449 50S ribosomal protein L1 NP_859895.1 357374 R 235279 CDS NP_859896.1 32265864 1493419 complement(358095..358520) 1 NC_004917.1 binds directly to 23S ribosomal RNA; 50S ribosomal protein L11 358520 rplK 1493419 rplK Helicobacter hepaticus ATCC 51449 50S ribosomal protein L11 NP_859896.1 358095 R 235279 CDS NP_859897.1 32265865 1493420 complement(358550..359065) 1 NC_004917.1 Modulates Rho-dependent transcription termination; transcription antitermination protein NusG 359065 nusG 1493420 nusG Helicobacter hepaticus ATCC 51449 transcription antitermination protein NusG NP_859897.1 358550 R 235279 CDS NP_859898.1 32265866 1493421 complement(359086..359268) 1 NC_004917.1 forms a complex with SecY and SecG; SecYEG forms a protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; preprotein translocase subunit SecE 359268 secE 1493421 secE Helicobacter hepaticus ATCC 51449 preprotein translocase subunit SecE NP_859898.1 359086 R 235279 CDS NP_859899.1 32265867 1493422 complement(359396..359566) 1 NC_004917.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; 50S ribosomal protein L33 359566 rpmG 1493422 rpmG Helicobacter hepaticus ATCC 51449 50S ribosomal protein L33 NP_859899.1 359396 R 235279 CDS NP_859900.1 32265868 1493423 complement(359581..360780) 1 NC_004917.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; elongation factor Tu 360780 tuf 1493423 tuf Helicobacter hepaticus ATCC 51449 elongation factor Tu NP_859900.1 359581 R 235279 CDS NP_859901.1 32265869 1493424 361949..362437 1 NC_004917.1 predicted membrane-associated; hypothetical protein 362437 1493424 HH0370 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859901.1 361949 D 235279 CDS NP_859902.1 32265870 1493425 362976..363089 1 NC_004917.1 hypothetical protein 363089 1493425 HH0371 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859902.1 362976 D 235279 CDS NP_859903.1 32265871 1493426 363192..364349 1 NC_004917.1 similar to Helicobacter pylori HP0624; predicted aminotransferase; hypothetical protein 364349 1493426 HH0372 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859903.1 363192 D 235279 CDS NP_859904.1 32265872 1493427 364346..365665 1 NC_004917.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; UDP-N-acetylmuramate--L-alanine ligase 365665 murC 1493427 murC Helicobacter hepaticus ATCC 51449 UDP-N-acetylmuramate--L-alanine ligase NP_859904.1 364346 D 235279 CDS NP_859905.1 32265873 1493428 365665..366117 1 NC_004917.1 predicted membrane-associated; hypothetical protein 366117 1493428 HH0374 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859905.1 365665 D 235279 CDS NP_859906.1 32265874 1493429 366104..368326 1 NC_004917.1 MutS2; MutS-II; involved in blocking homologous and homeologous recombination; has ATPase activity stimulated by recombination intermediates; inhibits DNA strand exchange; recombination and DNA strand exchange inhibitor protein 368326 mutS 1493429 mutS Helicobacter hepaticus ATCC 51449 recombination and DNA strand exchange inhibitor protein NP_859906.1 366104 D 235279 CDS NP_859907.1 32265875 1493430 368393..369136 1 NC_004917.1 predicted membrane-associated; hypothetical protein 369136 1493430 HH0376 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859907.1 368393 D 235279 CDS NP_859908.1 32265876 1493431 369136..369429 1 NC_004917.1 hypothetical protein 369429 1493431 HH0377 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859908.1 369136 D 235279 CDS NP_859909.1 32265877 1493432 complement(369445..369915) 1 NC_004917.1 similar to Campylobacter jejuni CJ0904c; rRNA methylase (SpoU class) 369915 1493432 HH0378 Helicobacter hepaticus ATCC 51449 rRNA methylase (SpoU class) NP_859909.1 369445 R 235279 CDS NP_859910.1 32265878 1493433 370065..371639 1 NC_004917.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; anaerobic C4-dicarboxylate transporter 371639 dcuA 1493433 dcuA Helicobacter hepaticus ATCC 51449 anaerobic C4-dicarboxylate transporter NP_859910.1 370065 D 235279 CDS NP_859911.1 32265879 1493434 371691..372728 1 NC_004917.1 UDP-glucose 4-epimerase 372728 galE 1493434 galE Helicobacter hepaticus ATCC 51449 UDP-glucose 4-epimerase NP_859911.1 371691 D 235279 CDS NP_859912.1 32265880 1493435 372745..373503 1 NC_004917.1 predicted secreted protein; hypothetical protein 373503 1493435 HH0381 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859912.1 372745 D 235279 CDS NP_859913.1 32265881 1493436 373514..374521 1 NC_004917.1 hypothetical protein 374521 1493436 HH0382 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859913.1 373514 D 235279 CDS NP_859914.1 32265882 1493437 374548..375921 1 NC_004917.1 hypothetical protein 375921 1493437 HH0383 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859914.1 374548 D 235279 CDS NP_859915.1 32265883 1493438 376094..376621 1 NC_004917.1 hypothetical protein 376621 1493438 HH0384 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859915.1 376094 D 235279 CDS NP_859916.1 32265884 1493439 376621..377163 1 NC_004917.1 predicted membrane-associated; hypothetical protein 377163 1493439 HH0385 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859916.1 376621 D 235279 CDS NP_859917.1 32265885 1493440 377153..377800 1 NC_004917.1 hypothetical protein 377800 1493440 HH0386 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859917.1 377153 D 235279 CDS NP_859918.1 32265886 1493441 377800..378363 1 NC_004917.1 predicted membrane-associated; hypothetical protein 378363 1493441 HH0387 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859918.1 377800 D 235279 CDS NP_859919.1 32265887 1493442 378353..378733 1 NC_004917.1 hypothetical protein 378733 1493442 HH0388 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859919.1 378353 D 235279 CDS NP_859920.1 32265888 1493443 378733..379086 1 NC_004917.1 predicted membrane-associated; hypothetical protein 379086 1493443 HH0389 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859920.1 378733 D 235279 CDS NP_859921.1 32265889 1493444 379101..379646 1 NC_004917.1 hypothetical protein 379646 1493444 HH0390 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859921.1 379101 D 235279 CDS NP_859922.1 32265890 1493445 379627..380208 1 NC_004917.1 predicted membrane-associated; hypothetical protein 380208 1493445 HH0391 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859922.1 379627 D 235279 CDS NP_859923.1 32265891 1493446 380201..380680 1 NC_004917.1 hypothetical protein 380680 1493446 HH0392 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859923.1 380201 D 235279 CDS NP_859924.1 32265892 1493447 380691..381185 1 NC_004917.1 predicted membrane-associated; hypothetical protein 381185 1493447 HH0393 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859924.1 380691 D 235279 CDS NP_859925.1 32265893 1493448 381160..381522 1 NC_004917.1 hypothetical protein 381522 1493448 HH0394 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859925.1 381160 D 235279 CDS NP_859926.1 32265894 1493449 complement(381504..382451) 1 NC_004917.1 hypothetical protein 382451 1493449 HH0395 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859926.1 381504 R 235279 CDS NP_859927.1 32265895 1493450 382630..384531 1 NC_004917.1 acetyl-CoA synthetase 384531 acoE 1493450 acoE Helicobacter hepaticus ATCC 51449 acetyl-CoA synthetase NP_859927.1 382630 D 235279 CDS NP_859928.1 32265896 1493451 384535..385410 1 NC_004917.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; 2-methylisocitrate lyase 385410 prpB 1493451 prpB Helicobacter hepaticus ATCC 51449 2-methylisocitrate lyase NP_859928.1 384535 D 235279 CDS NP_859929.1 32265897 1493452 385421..386569 1 NC_004917.1 involved in propionate metabolism; citrate synthase PrpC 386569 prpC 1493452 prpC Helicobacter hepaticus ATCC 51449 citrate synthase PrpC NP_859929.1 385421 D 235279 CDS NP_859930.1 32265898 1493453 386603..388060 1 NC_004917.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; 2-methylcitrate dehydratase 388060 prpD 1493453 prpD Helicobacter hepaticus ATCC 51449 2-methylcitrate dehydratase NP_859930.1 386603 D 235279 CDS NP_859931.1 32265899 1493454 388108..388623 1 NC_004917.1 hypothetical protein 388623 1493454 HH0400 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859931.1 388108 D 235279 CDS NP_859932.1 32265900 1493455 complement(388738..389253) 1 NC_004917.1 hypothetical protein 389253 1493455 HH0401 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859932.1 388738 R 235279 CDS NP_859933.1 32265901 1493456 complement(389536..389691) 1 NC_004917.1 hypothetical protein 389691 1493456 HH0402 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859933.1 389536 R 235279 CDS NP_859934.1 32265902 1493457 complement(389688..390569) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 390569 1493457 HH0403 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859934.1 389688 R 235279 CDS NP_859935.1 32265903 1493458 complement(390631..390990) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 390990 1493458 HH0404 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859935.1 390631 R 235279 CDS NP_859936.1 32265904 1493459 complement(391029..391439) 1 NC_004917.1 similar to Campylobacter jejuni acid periplasmic protein CJ0424; hypothetical protein 391439 1493459 HH0405 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859936.1 391029 R 235279 CDS NP_859937.1 32265905 1493460 391621..391866 1 NC_004917.1 predicted membrane-associated; hypothetical protein 391866 1493460 HH0406 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859937.1 391621 D 235279 CDS NP_859938.1 32265906 1493461 391929..392606 1 NC_004917.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits; urease subunit alpha 392606 ureA 1493461 ureA Helicobacter hepaticus ATCC 51449 urease subunit alpha NP_859938.1 391929 D 235279 CDS NP_859939.1 32265907 1493462 392628..394337 1 NC_004917.1 ureases catalyze the hydrolysis of urea into ammonia and carbon dioxide; in Helicobacter pylori the ammonia released plays a key role in bacterial survival by neutralizing acids when colonizing the gastric mucosa; the holoenzyme is composed of 3 ureA(alpha) and 3 ureB (beta) subunits; urease subunit beta 394337 ureB 1493462 ureB Helicobacter hepaticus ATCC 51449 urease subunit beta NP_859939.1 392628 D 235279 CDS NP_859940.1 32265908 1493463 394347..394859 1 NC_004917.1 urease accessory protein UreI 394859 ureI 1493463 ureI Helicobacter hepaticus ATCC 51449 urease accessory protein UreI NP_859940.1 394347 D 235279 CDS NP_859941.2 161546633 1493464 394859..395383 1 NC_004917.1 involved in the assembly of the urease metallocenter; possible nickel donor; urease accessory protein UreE 395383 ureE 1493464 ureE Helicobacter hepaticus ATCC 51449 urease accessory protein UreE NP_859941.2 394859 D 235279 CDS NP_859942.1 32265910 1493465 395380..396042 1 NC_004917.1 urease accessory protein UreF 396042 ureF 1493465 ureF Helicobacter hepaticus ATCC 51449 urease accessory protein UreF NP_859942.1 395380 D 235279 CDS NP_859943.1 32265911 1493466 396053..396655 1 NC_004917.1 urease/hydrogenase-associated GTPase UreG 396655 ureG 1493466 ureG Helicobacter hepaticus ATCC 51449 urease/hydrogenase-associated GTPase UreG NP_859943.1 396053 D 235279 CDS NP_859944.1 32265912 1493467 396730..397410 1 NC_004917.1 urease accessory protein UreH 397410 ureH 1493467 ureH Helicobacter hepaticus ATCC 51449 urease accessory protein UreH NP_859944.1 396730 D 235279 CDS NP_859945.1 32265913 1493468 complement(397413..398126) 1 NC_004917.1 nickel transport ATP-binding protein NikE 398126 nikE 1493468 nikE Helicobacter hepaticus ATCC 51449 nickel transport ATP-binding protein NikE NP_859945.1 397413 R 235279 CDS NP_859946.1 32265914 1493469 complement(398120..399787) 1 NC_004917.1 nickel transport permease component NikD 399787 nikD 1493469 nikD Helicobacter hepaticus ATCC 51449 nickel transport permease component NikD NP_859946.1 398120 R 235279 CDS NP_859947.1 32265915 1493470 complement(399784..400680) 1 NC_004917.1 nickel transport system permease NikB 400680 nikB 1493470 nikB Helicobacter hepaticus ATCC 51449 nickel transport system permease NikB NP_859947.1 399784 R 235279 CDS NP_859948.1 32265916 1493471 complement(400797..402362) 1 NC_004917.1 nickel transport system periplasmic component NikA 402362 nikA 1493471 nikA Helicobacter hepaticus ATCC 51449 nickel transport system periplasmic component NikA NP_859948.1 400797 R 235279 CDS NP_859949.1 32265917 1493472 402505..404679 1 NC_004917.1 similar to Pseudomonas aeruginosa outer membrane hemin receptor; hypothetical protein 404679 1493472 HH0418 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859949.1 402505 D 235279 CDS NP_859950.1 32265918 1493473 404743..405537 1 NC_004917.1 catalyzes the formation of glutamate 5-phosphate from glutamate in proline biosynthesis; gamma-glutamyl kinase 405537 proB 1493473 proB Helicobacter hepaticus ATCC 51449 gamma-glutamyl kinase NP_859950.1 404743 D 235279 CDS NP_859951.1 32265919 1493474 405498..406448 1 NC_004917.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; methionyl-tRNA formyltransferase 406448 fmt 1493474 fmt Helicobacter hepaticus ATCC 51449 methionyl-tRNA formyltransferase NP_859951.1 405498 D 235279 CDS NP_859952.1 32265920 1493475 406464..407183 1 NC_004917.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; biotin--protein ligase 407183 birA 1493475 birA Helicobacter hepaticus ATCC 51449 biotin--protein ligase NP_859952.1 406464 D 235279 CDS NP_859953.1 32265921 1493476 407194..407979 1 NC_004917.1 chromosome partitioning ATPase ParA 407979 parA 1493476 parA Helicobacter hepaticus ATCC 51449 chromosome partitioning ATPase ParA NP_859953.1 407194 D 235279 CDS NP_859954.1 32265922 1493477 407985..408857 1 NC_004917.1 transcriptional regulator involved in chromosome partitioning ParB 408857 parB 1493477 parB Helicobacter hepaticus ATCC 51449 transcriptional regulator involved in chromosome partitioning ParB NP_859954.1 407985 D 235279 CDS NP_859955.1 32265923 1493478 408934..409359 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B' is part of the membrane proton channel.; ATP synthase F0F1 subunit B' 409359 atpF 1493478 atpF Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit B' NP_859955.1 408934 D 235279 CDS NP_859956.1 32265924 1493479 409369..409884 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel.; ATP synthase F0F1 subunit B 409884 atpF' 1493479 atpF' Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit B NP_859956.1 409369 D 235279 CDS NP_859957.1 32265925 1493480 409884..410408 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The delta subunit is part of the catalytic core of the ATP synthase complex; ATP synthase F0F1 subunit delta 410408 atpH 1493480 atpH Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit delta NP_859957.1 409884 D 235279 CDS NP_859958.1 32265926 1493481 410430..411944 1 NC_004917.1 produces ATP from ADP in the presence of a proton gradient across the membrane; the alpha chain is a catalytic subunit; ATP synthase F0F1 subunit alpha 411944 atpA 1493481 atpA Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit alpha NP_859958.1 410430 D 235279 CDS NP_859959.1 32265927 1493482 411957..412850 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; ATP synthase F0F1 subunit gamma 412850 atpG 1493482 atpG Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit gamma NP_859959.1 411957 D 235279 CDS NP_859960.1 32265928 1493483 412869..414269 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The beta chain is a regulatory subunit; ATP synthase F0F1 subunit beta 414269 atpD 1493483 atpD Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit beta NP_859960.1 412869 D 235279 CDS NP_859961.1 32265929 1493484 414278..414673 1 NC_004917.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; ATP synthase F0F1 subunit epsilon 414673 atpC 1493484 atpC Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit epsilon NP_859961.1 414278 D 235279 CDS NP_859962.1 32265930 1493485 414683..415246 1 NC_004917.1 ExbB-like; biopolymer transport protein 415246 1493485 HH0431 Helicobacter hepaticus ATCC 51449 biopolymer transport protein NP_859962.1 414683 D 235279 CDS NP_859963.1 32265931 1493486 415254..415649 1 NC_004917.1 biopolymer transport protein ExbD-like 415649 1493486 HH0432 Helicobacter hepaticus ATCC 51449 biopolymer transport protein ExbD-like NP_859963.1 415254 D 235279 CDS NP_859964.1 32265932 1493487 415651..416343 1 NC_004917.1 similar to Helicobacter pylori HP1127; predicted secreted protein; hypothetical protein 416343 1493487 HH0433 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859964.1 415651 D 235279 CDS NP_859965.1 32265933 1493488 416353..417612 1 NC_004917.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; translocation protein TolB 417612 tolB 1493488 tolB Helicobacter hepaticus ATCC 51449 translocation protein TolB NP_859965.1 416353 D 235279 CDS NP_859966.1 32265934 1493489 417669..418130 1 NC_004917.1 MotB-family; hypothetical protein 418130 1493489 HH0435 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859966.1 417669 D 235279 CDS NP_859967.1 32265935 1493490 418154..418999 1 NC_004917.1 similar to Helicobacter pylori HP1124; predicted secreted protein; hypothetical protein 418999 1493490 HH0436 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859967.1 418154 D 235279 CDS NP_859968.1 32265936 1493491 418996..419550 1 NC_004917.1 rotamase; FKBP-type peptidylprolyl isomerase 419550 slyD 1493491 slyD Helicobacter hepaticus ATCC 51449 FKBP-type peptidylprolyl isomerase NP_859968.1 418996 D 235279 CDS NP_859969.1 32265937 1493492 419734..420000 1 NC_004917.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliQ 420000 fliQ 1493492 fliQ Helicobacter hepaticus ATCC 51449 flagellar biosynthesis protein FliQ NP_859969.1 419734 D 235279 CDS NP_859970.1 32265938 1493493 420004..420795 1 NC_004917.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; UDP-N-acetylenolpyruvoylglucosamine reductase 420795 murB 1493493 murB Helicobacter hepaticus ATCC 51449 UDP-N-acetylenolpyruvoylglucosamine reductase NP_859970.1 420004 D 235279 CDS NP_859971.1 32265939 1493494 421336..421734 1 NC_004917.1 preprotein translocase subunit SecG 421734 secG 1493494 secG Helicobacter hepaticus ATCC 51449 preprotein translocase subunit SecG NP_859971.1 421336 D 235279 CDS NP_859972.1 32265940 1493495 421749..422306 1 NC_004917.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; ribosome recycling factor 422306 frr 1493495 frr Helicobacter hepaticus ATCC 51449 ribosome recycling factor NP_859972.1 421749 D 235279 CDS NP_859973.1 32265941 1493496 422309..424123 1 NC_004917.1 catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; threonyl-tRNA synthetase 424123 thrS 1493496 thrS Helicobacter hepaticus ATCC 51449 threonyl-tRNA synthetase NP_859973.1 422309 D 235279 CDS NP_859974.1 32265942 1493497 424120..424644 1 NC_004917.1 IF-3 has several functions that are required and promote translation initiation including; preventing association of 70S by binding to 30S; monitoring codon-anticodon interactions by promoting disassociation of fMet-tRNA(fMet) from initiation complexes formed on leaderless mRNAs or incorrectly bound noninitiatior tRNAs and complexes with noncanonical start sites; stimulates codon-anticodon interactions at P-site; involved in moving mRNA to the P-site; and in recycling subunits; translation initiation factor IF-3 424644 infC 1493497 infC Helicobacter hepaticus ATCC 51449 translation initiation factor IF-3 NP_859974.1 424120 D 235279 CDS NP_859975.2 161546632 1493498 424667..424861 1 NC_004917.1 50S ribosomal protein L35 424861 rpmI 1493498 rpmI Helicobacter hepaticus ATCC 51449 50S ribosomal protein L35 NP_859975.2 424667 D 235279 CDS NP_859976.1 32265944 1493499 424944..425297 1 NC_004917.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; 50S ribosomal protein L20 425297 rplT 1493499 rplT Helicobacter hepaticus ATCC 51449 50S ribosomal protein L20 NP_859976.1 424944 D 235279 CDS NP_859977.1 32265945 1493500 425458..426615 1 NC_004917.1 similar to Helicobacter pylori HP1044; predicted membrane-associated; hypothetical protein 426615 1493500 HH0446 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859977.1 425458 D 235279 CDS NP_859978.1 32265946 1493501 complement(426584..427249) 1 NC_004917.1 hypothetical protein 427249 1493501 HH0447 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859978.1 426584 R 235279 CDS NP_859979.1 32265947 1493502 complement(427246..427419) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 427419 1493502 HH0448 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859979.1 427246 R 235279 CDS NP_859980.1 32265948 1493503 complement(427434..428129) 1 NC_004917.1 phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase 428129 hisI 1493503 hisI Helicobacter hepaticus ATCC 51449 phosphoribosyl-AMP cyclohydrolase/ phosphoribosyl-ATP pyrophosphohydrolase NP_859980.1 427434 R 235279 CDS NP_859981.1 32265949 1493504 complement(428134..429231) 1 NC_004917.1 similar to Helicobacter pylori JHP0233; predicted membrane-associated; hypothetical protein 429231 1493504 HH0450 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859981.1 428134 R 235279 CDS NP_859982.1 32265950 1493505 complement(429233..430165) 1 NC_004917.1 catalyzes the transamination of the branched-chain amino acids to their respective alpha-keto acids; branched-chain amino acid aminotransferase 430165 ilvE 1493505 ilvE Helicobacter hepaticus ATCC 51449 branched-chain amino acid aminotransferase NP_859982.1 429233 R 235279 CDS NP_859983.1 32265951 1493506 complement(430298..431770) 1 NC_004917.1 similar to Campylobacter jejuni CJ1249; hypothetical protein 431770 1493506 HH0452 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859983.1 430298 R 235279 CDS NP_859984.1 32265952 1493507 432151..434976 1 NC_004917.1 DNA translocase FtsK 434976 ftsK 1493507 ftsK Helicobacter hepaticus ATCC 51449 DNA translocase FtsK NP_859984.1 432151 D 235279 CDS NP_859985.1 32265953 1493508 435032..436465 1 NC_004917.1 similar to Campylobacter jejuni HtrA; serine protease 436465 htrA 1493508 htrA Helicobacter hepaticus ATCC 51449 serine protease NP_859985.1 435032 D 235279 CDS NP_859986.1 32265954 1493509 436487..437323 1 NC_004917.1 chemotaxis protein CheR 437323 cheR 1493509 cheR Helicobacter hepaticus ATCC 51449 chemotaxis protein CheR NP_859986.1 436487 D 235279 CDS NP_859987.1 32265955 1493510 437327..438040 1 NC_004917.1 chemotaxis protein methylesterase CheB 438040 cheB 1493510 cheB Helicobacter hepaticus ATCC 51449 chemotaxis protein methylesterase CheB NP_859987.1 437327 D 235279 CDS NP_859988.1 32265956 1493511 complement(438246..438494) 1 NC_004917.1 similar to Helicobacter pylori HP1436; predicted membrane-associated; hypothetical protein 438494 1493511 HH0457 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859988.1 438246 R 235279 CDS NP_859989.1 32265957 1493512 complement(438504..441509) 1 NC_004917.1 transcription-repair coupling factor 441509 mfd 1493512 mfd Helicobacter hepaticus ATCC 51449 transcription-repair coupling factor NP_859989.1 438504 R 235279 CDS NP_859990.1 32265958 1493513 complement(441536..441955) 1 NC_004917.1 similar to Helicobacter pylori HP1542; hypothetical protein 441955 1493513 HH0459 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859990.1 441536 R 235279 CDS NP_859991.1 32265959 1493514 complement(441913..442812) 1 NC_004917.1 similar to Helicobacter pylori HP1543; membrane proteins related to metalloendopeptidase 442812 1493514 HH0460 Helicobacter hepaticus ATCC 51449 membrane proteins related to metalloendopeptidase NP_859991.1 441913 R 235279 CDS NP_859992.1 32265960 1493515 complement(442816..443691) 1 NC_004917.1 similar to Vibrio cholerae TagE (VC0843); hypothetical protein 443691 tagE 1493515 tagE Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859992.1 442816 R 235279 CDS NP_859993.1 32265961 1493516 complement(443692..444900) 1 NC_004917.1 folylpolyglutamate synthase 444900 folC 1493516 folC Helicobacter hepaticus ATCC 51449 folylpolyglutamate synthase NP_859993.1 443692 R 235279 CDS NP_859994.1 32265962 1493517 complement(444897..445931) 1 NC_004917.1 hypothetical protein 445931 1493517 HH0463 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859994.1 444897 R 235279 CDS NP_859995.1 32265963 1493518 complement(445906..446418) 1 NC_004917.1 similar to Helicobacter pylori HP1546; hypothetical protein 446418 1493518 HH0464 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859995.1 445906 R 235279 CDS NP_859996.1 32265964 1493519 complement(446418..448910) 1 NC_004917.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; leucyl-tRNA synthetase 448910 leuS 1493519 leuS Helicobacter hepaticus ATCC 51449 leucyl-tRNA synthetase NP_859996.1 446418 R 235279 CDS NP_859997.1 32265965 1493520 449135..450376 1 NC_004917.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 450376 alr 1493520 alr Helicobacter hepaticus ATCC 51449 alanine racemase NP_859997.1 449135 D 235279 CDS NP_859998.1 32265966 1493521 450486..452693 1 NC_004917.1 membrane protein involved in the flagellar export apparatus; flagellar biosynthesis protein FlhA 452693 flhA 1493521 flhA Helicobacter hepaticus ATCC 51449 flagellar biosynthesis protein FlhA NP_859998.1 450486 D 235279 CDS NP_859999.1 32265967 1493522 452702..453829 1 NC_004917.1 similar to Helicobacter pylori HP1042; hypothetical protein 453829 1493522 HH0468 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_859999.1 452702 D 235279 CDS NP_860000.1 32265968 1493523 453826..454095 1 NC_004917.1 hypothetical protein 454095 1493523 HH0469 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860000.1 453826 D 235279 CDS NP_860001.1 32265969 1493524 454156..454731 1 NC_004917.1 GAR transformylase PurN 454731 purN 1493524 purN Helicobacter hepaticus ATCC 51449 GAR transformylase PurN NP_860001.1 454156 D 235279 CDS NP_860002.1 32265970 1493525 454728..455912 1 NC_004917.1 similar to Helicobacter pylori ion-channel HP1183; hypothetical protein 455912 kefB_1 1493525 kefB_1 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860002.1 454728 D 235279 CDS NP_860003.1 32265971 1493526 455912..457309 1 NC_004917.1 similar to Campylobacter jejuni CJ0601c; SNF family sodium-dependent transporter 457309 1493526 HH0472 Helicobacter hepaticus ATCC 51449 SNF family sodium-dependent transporter NP_860003.1 455912 D 235279 CDS NP_860004.1 32265972 1493527 457376..459151 1 NC_004917.1 similar to Helicobacter pylori HP1252; periplasmic binding component of ABC-type transport system 459151 1493527 HH0473 Helicobacter hepaticus ATCC 51449 periplasmic binding component of ABC-type transport system NP_860004.1 457376 D 235279 CDS NP_860005.1 32265973 1493528 459280..461037 1 NC_004917.1 similar to Campylobacter jejuni CJ0377; ATPase 461037 1493528 HH0474 Helicobacter hepaticus ATCC 51449 ATPase NP_860005.1 459280 D 235279 CDS NP_860006.1 32265974 1493529 461338..461649 1 NC_004917.1 predicted secreted protein; hypothetical protein 461649 1493529 HH0475 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860006.1 461338 D 235279 CDS NP_860007.1 32265975 1493530 461646..462074 1 NC_004917.1 predicted secreted protein; hypothetical protein 462074 1493530 HH0476 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860007.1 461646 D 235279 CDS NP_860008.1 32265976 1493531 462353..462679 1 NC_004917.1 hypothetical protein 462679 1493531 HH0477 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860008.1 462353 D 235279 CDS NP_860009.1 32265977 1493532 462752..463801 1 NC_004917.1 similar to Helicobacter pylori HP1079; ATPase 463801 1493532 HH0478 Helicobacter hepaticus ATCC 51449 ATPase NP_860009.1 462752 D 235279 CDS NP_860010.1 32265978 1493533 464216..464359 1 NC_004917.1 hypothetical protein 464359 1493533 HH0479 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860010.1 464216 D 235279 CDS NP_860011.1 32265979 1493534 464383..464481 1 NC_004917.1 hypothetical protein 464481 1493534 HH0480 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860011.1 464383 D 235279 CDS NP_860012.1 32265980 1493535 complement(464452..466539) 1 NC_004917.1 similar to methyl-accepting chemotaxis proteins; similar to Campylobacter jejuni CJ1506c; hypothetical protein 466539 1493535 HH0481 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860012.1 464452 R 235279 CDS NP_860013.1 32265981 1493536 466710..467774 1 NC_004917.1 similar to Helicobacter pylori HP1321; ATPase 467774 1493536 HH0482 Helicobacter hepaticus ATCC 51449 ATPase NP_860013.1 466710 D 235279 CDS NP_860014.2 229220792 1493537 complement(467785..469320) 1 NC_004917.1 involved in de novo purine biosynthesis; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 469320 purH 1493537 purH Helicobacter hepaticus ATCC 51449 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase NP_860014.2 467785 R 235279 CDS NP_860015.1 32265983 1493538 469382..470260 1 NC_004917.1 similar to Campylobacter jejuni CJ1132c; hypothetical protein 470260 1493538 HH0484 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860015.1 469382 D 235279 CDS NP_860016.1 32265984 1493539 470499..471152 1 NC_004917.1 glutamine amidotransferase HisH 471152 hisH 1493539 hisH Helicobacter hepaticus ATCC 51449 glutamine amidotransferase HisH NP_860016.1 470499 D 235279 CDS NP_860017.1 32265985 1493540 471235..472170 1 NC_004917.1 thioredoxin reductase 472170 trxB_1 1493540 trxB_1 Helicobacter hepaticus ATCC 51449 thioredoxin reductase NP_860017.1 471235 D 235279 CDS NP_860018.1 32265986 1493541 472213..472980 1 NC_004917.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate reductase 472980 dapB 1493541 dapB Helicobacter hepaticus ATCC 51449 dihydrodipicolinate reductase NP_860018.1 472213 D 235279 CDS NP_860019.1 32265987 1493542 473048..474472 1 NC_004917.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; amidophosphoribosyltransferase 474472 purF 1493542 purF Helicobacter hepaticus ATCC 51449 amidophosphoribosyltransferase NP_860019.1 473048 D 235279 CDS NP_860020.1 32265988 1493543 474482..475444 1 NC_004917.1 similar to Escherichia coli YhcC; hypothetical protein 475444 1493543 HH0489 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860020.1 474482 D 235279 CDS NP_860021.1 32265989 1493544 complement(475476..476339) 1 NC_004917.1 similar to Helicobacter pylori periplasmic protein; hypothetical protein 476339 1493544 HH0490 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860021.1 475476 R 235279 CDS NP_860022.1 32265990 1493545 complement(476357..477607) 1 NC_004917.1 catalyzes the formation of D-fructose 6-phosphate from D-glucose 6-phosphate; glucose-6-phosphate isomerase 477607 pgi 1493545 pgi Helicobacter hepaticus ATCC 51449 glucose-6-phosphate isomerase NP_860022.1 476357 R 235279 CDS NP_860023.1 32265991 1493546 complement(477614..478597) 1 NC_004917.1 catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; glyceraldehyde-3-phosphate dehydrogenase 478597 gap_2 1493546 gap_2 Helicobacter hepaticus ATCC 51449 glyceraldehyde-3-phosphate dehydrogenase NP_860023.1 477614 R 235279 CDS NP_860024.1 32265992 1493547 complement(478612..478719) 1 NC_004917.1 hypothetical protein 478719 1493547 HH0493 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860024.1 478612 R 235279 CDS NP_860025.1 32265993 1493548 complement(478824..479723) 1 NC_004917.1 hypothetical protein 479723 1493548 HH0494 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860025.1 478824 R 235279 CDS NP_860026.1 32265994 1493549 complement(479804..481897) 1 NC_004917.1 catalyzes the reversible transfer of the terminal phosphate of ATP to form a long chain polyphosphate; polyphosphate kinase 481897 ppk 1493549 ppk Helicobacter hepaticus ATCC 51449 polyphosphate kinase NP_860026.1 479804 R 235279 CDS NP_860027.1 32265995 1493550 482101..482613 1 NC_004917.1 predicted secreted protein; hypothetical protein 482613 1493550 HH0496 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860027.1 482101 D 235279 CDS NP_860028.1 32265996 1493551 482701..484545 1 NC_004917.1 similar to Campylobacter jejuni CJ0546; hypothetical protein 484545 yigC 1493551 yigC Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860028.1 482701 D 235279 CDS NP_860029.1 32265997 1493552 484628..485056 1 NC_004917.1 in Escherichia coli this protein is one of the earliest assembly proteins in the large subunit; 50S ribosomal protein L13 485056 rplM 1493552 rplM Helicobacter hepaticus ATCC 51449 50S ribosomal protein L13 NP_860029.1 484628 D 235279 CDS NP_860030.1 32265998 1493553 485065..485454 1 NC_004917.1 forms a direct contact with the tRNA during translation; 30S ribosomal protein S9 485454 rpsI 1493553 rpsI Helicobacter hepaticus ATCC 51449 30S ribosomal protein S9 NP_860030.1 485065 D 235279 CDS NP_860031.1 32265999 1493554 485552..486085 1 NC_004917.1 similar to Campylobacter jejuni CJ0809c; hydrolase 486085 ycbL 1493554 ycbL Helicobacter hepaticus ATCC 51449 hydrolase NP_860031.1 485552 D 235279 CDS NP_860032.1 32266000 1493555 486136..486906 1 NC_004917.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotA 486906 motA 1493555 motA Helicobacter hepaticus ATCC 51449 flagellar motor protein MotA NP_860032.1 486136 D 235279 CDS NP_860033.1 32266001 1493556 486926..487681 1 NC_004917.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; flagellar motor protein MotB 487681 motB 1493556 motB Helicobacter hepaticus ATCC 51449 flagellar motor protein MotB NP_860033.1 486926 D 235279 CDS NP_860034.1 32266002 1493557 487742..487864 1 NC_004917.1 may become fused with HH0504 due to slipped strand mispairing; hypothetical protein 487864 1493557 HH0503 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860034.1 487742 D 235279 CDS NP_860035.1 32266003 1493558 487930..488166 1 NC_004917.1 may become fused with HH0503 due to slipped strand mispairing; hypothetical protein 488166 1493558 HH0504 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860035.1 487930 D 235279 CDS NP_860036.1 32266004 1493559 488422..488631 1 NC_004917.1 predicted membrane-associated; hypothetical protein 488631 1493559 HH0505 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860036.1 488422 D 235279 CDS NP_860037.1 32266005 1493560 complement(488672..489682) 1 NC_004917.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Holliday junction DNA helicase RuvB 489682 ruvB 1493560 ruvB Helicobacter hepaticus ATCC 51449 Holliday junction DNA helicase RuvB NP_860037.1 488672 R 235279 CDS NP_860038.1 32266006 1493561 complement(489763..490557) 1 NC_004917.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; 3-methyl-2-oxobutanoate hydroxymethyltransferase 490557 panB 1493561 panB Helicobacter hepaticus ATCC 51449 3-methyl-2-oxobutanoate hydroxymethyltransferase NP_860038.1 489763 R 235279 CDS NP_860039.1 32266007 1493562 complement(490584..490904) 1 NC_004917.1 similar to Campylobacter jejuni CJ1174; efflux protein 490904 1493562 HH0508 Helicobacter hepaticus ATCC 51449 efflux protein NP_860039.1 490584 R 235279 CDS NP_860040.1 32266008 1493563 complement(490905..491261) 1 NC_004917.1 efflux protein 491261 1493563 HH0509 Helicobacter hepaticus ATCC 51449 efflux protein NP_860040.1 490905 R 235279 CDS NP_860041.1 32266009 1493564 complement(491258..492136) 1 NC_004917.1 transfers the N-acyl diglyceride moiety to the prospective N-terminal cysteine in prolipoprotein; prolipoprotein diacylglyceryl transferase 492136 lgt 1493564 lgt Helicobacter hepaticus ATCC 51449 prolipoprotein diacylglyceryl transferase NP_860041.1 491258 R 235279 CDS NP_860042.1 32266010 1493565 complement(492139..492459) 1 NC_004917.1 hypothetical protein 492459 1493565 HH0511 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860042.1 492139 R 235279 CDS NP_860043.1 32266011 1493566 complement(492519..492995) 1 NC_004917.1 hypothetical protein 492995 1493566 HH0512 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860043.1 492519 R 235279 CDS NP_860044.1 32266012 1493567 complement(493011..494609) 1 NC_004917.1 similar to methyl-accepting chemotaxis proteins; hypothetical protein 494609 1493567 HH0513 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860044.1 493011 R 235279 CDS NP_860045.1 32266013 1493568 complement(494637..495227) 1 NC_004917.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Holliday junction DNA helicase RuvA 495227 ruvA 1493568 ruvA Helicobacter hepaticus ATCC 51449 Holliday junction DNA helicase RuvA NP_860045.1 494637 R 235279 CDS NP_860046.1 32266014 1493569 complement(495283..497139) 1 NC_004917.1 hypothetical protein 497139 1493569 HH0515 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860046.1 495283 R 235279 CDS NP_860047.1 32266015 1493570 497317..498699 1 NC_004917.1 similar to Escherichia coli MviN; predicted membrane-associated; hypothetical protein 498699 1493570 HH0516 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860047.1 497317 D 235279 CDS NP_860048.1 32266016 1493571 498696..500162 1 NC_004917.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; cysteinyl-tRNA synthetase 500162 cysS 1493571 cysS Helicobacter hepaticus ATCC 51449 cysteinyl-tRNA synthetase NP_860048.1 498696 D 235279 CDS NP_860049.1 32266017 1493572 complement(500164..501024) 1 NC_004917.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; bifunctional riboflavin kinase/FMN adenylyltransferase 501024 ribF 1493572 ribF Helicobacter hepaticus ATCC 51449 bifunctional riboflavin kinase/FMN adenylyltransferase NP_860049.1 500164 R 235279 CDS NP_860050.1 32266018 1493573 complement(500993..501718) 1 NC_004917.1 similar to Helicobacter pylori HP1086; hypothetical protein 501718 1493573 HH0519 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860050.1 500993 R 235279 CDS NP_860051.1 32266019 1493574 complement(501727..502242) 1 NC_004917.1 hypothetical protein 502242 1493574 HH0520 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860051.1 501727 R 235279 CDS NP_860052.1 32266020 1493575 502410..503303 1 NC_004917.1 catalyzes the transfer of the carbamoyl moiety from carbamoyl phosphate to L- aspartate in pyrimidine biosynthesis; aspartate carbamoyltransferase 503303 pyrB 1493575 pyrB Helicobacter hepaticus ATCC 51449 aspartate carbamoyltransferase NP_860052.1 502410 D 235279 CDS NP_860053.1 32266021 1493576 503427..504737 1 NC_004917.1 similar to Helicobacter pylori HP1083; predicted secreted protein; hypothetical protein 504737 1493576 HH0522 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860053.1 503427 D 235279 CDS NP_860054.1 32266022 1493577 504844..505698 1 NC_004917.1 CDP-diglyceride synthetase CdsA 505698 cdsA 1493577 cdsA Helicobacter hepaticus ATCC 51449 CDP-diglyceride synthetase CdsA NP_860054.1 504844 D 235279 CDS NP_860055.1 32266023 1493578 505702..506811 1 NC_004917.1 catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4-phosphate; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 506811 dxr 1493578 dxr Helicobacter hepaticus ATCC 51449 1-deoxy-D-xylulose 5-phosphate reductoisomerase NP_860055.1 505702 D 235279 CDS NP_860056.1 32266024 1493579 506966..507604 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 507604 1493579 HH0525 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860056.1 506966 D 235279 CDS NP_860057.1 32266025 1493580 507605..507700 1 NC_004917.1 hypothetical protein 507700 1493580 HH0526 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860057.1 507605 D 235279 CDS NP_860058.1 32266026 1493581 507717..509261 1 NC_004917.1 catalyzes the formation of L-threonine from O-phospho-L-homoserine; threonine synthase 509261 thrC 1493581 thrC Helicobacter hepaticus ATCC 51449 threonine synthase NP_860058.1 507717 D 235279 CDS NP_860059.1 32266027 1493582 509346..509840 1 NC_004917.1 Catalyzes a step in the de novo purine nucleotide biosynthetic pathway; phosphoribosylaminoimidazole carboxylase catalytic subunit 509840 purE 1493582 purE Helicobacter hepaticus ATCC 51449 phosphoribosylaminoimidazole carboxylase catalytic subunit NP_860059.1 509346 D 235279 CDS NP_860060.1 32266028 1493583 509850..510332 1 NC_004917.1 similar to Campylobacter jejuni Cj0703; hypothetical protein 510332 1493583 HH0529 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860060.1 509850 D 235279 CDS NP_860061.1 32266029 1493584 510329..511249 1 NC_004917.1 similar to Campylobacter jejuni CJ0703; hypothetical protein 511249 1493584 HH0530 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860061.1 510329 D 235279 CDS NP_860062.1 32266030 1493585 511258..512154 1 NC_004917.1 glycine--tRNA ligase alpha chain; GlyRS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking its carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit alpha 512154 glyQ 1493585 glyQ Helicobacter hepaticus ATCC 51449 glycyl-tRNA synthetase subunit alpha NP_860062.1 511258 D 235279 CDS NP_860063.1 32266031 1493586 512154..514208 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 514208 1493586 HH0532 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860063.1 512154 D 235279 CDS NP_860064.1 32266032 1493587 514218..514904 1 NC_004917.1 hypothetical protein 514904 1493587 HH0533 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860064.1 514218 D 235279 CDS NP_860065.1 32266033 1493588 515008..516852 1 NC_004917.1 predicted ribonuclease; similar to Helicobacter pylori HP1248; hypothetical protein 516852 1493588 HH0534 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860065.1 515008 D 235279 CDS NP_860066.1 32266034 1493589 517329..518339 1 NC_004917.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; DNA polymerase III subunit delta 518339 1493589 HH0535 Helicobacter hepaticus ATCC 51449 DNA polymerase III subunit delta NP_860066.1 517329 D 235279 CDS NP_860067.1 32266035 1493590 518434..518847 1 NC_004917.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; 30S ribosomal protein S6 518847 rpsF 1493590 rpsF Helicobacter hepaticus ATCC 51449 30S ribosomal protein S6 NP_860067.1 518434 D 235279 CDS NP_860068.1 32266036 1493591 518865..519377 1 NC_004917.1 binds to single stranded DNA and may facilitate the binding and interaction of other proteins to DNA; single-stranded DNA-binding protein 519377 ssb 1493591 ssb Helicobacter hepaticus ATCC 51449 single-stranded DNA-binding protein NP_860068.1 518865 D 235279 CDS NP_860069.2 161546631 1493592 519396..519650 1 NC_004917.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; 30S ribosomal protein S18 519650 rpsR 1493592 rpsR Helicobacter hepaticus ATCC 51449 30S ribosomal protein S18 NP_860069.2 519396 D 235279 CDS NP_860070.1 32266038 1493593 519753..521816 1 NC_004917.1 predicted membrane-associated; hypothetical protein 521816 1493593 HH0539 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860070.1 519753 D 235279 CDS NP_860071.1 32266039 1493594 521952..522722 1 NC_004917.1 hypothetical protein 522722 1493594 HH0540 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860071.1 521952 D 235279 CDS NP_860072.1 32266040 1493595 complement(522724..522996) 1 NC_004917.1 primary rRNA binding protein; helps nucleate assembly of 30S; binds directly to the 16S rRNA and an intersubunit bridge to the 23S rRNA; autoregulates translation through interactions with the mRNA leader sequence; 30S ribosomal protein S15 522996 rpsO 1493595 rpsO Helicobacter hepaticus ATCC 51449 30S ribosomal protein S15 NP_860072.1 522724 R 235279 CDS NP_860073.1 32266041 1493596 complement(523088..523234) 1 NC_004917.1 hypothetical protein 523234 1493596 HH0542 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860073.1 523088 R 235279 CDS NP_860074.1 32266042 1493597 complement(523405..523560) 1 NC_004917.1 hypothetical protein 523560 1493597 HH0543 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860074.1 523405 R 235279 CDS NP_860075.1 32266043 1493598 complement(523699..523923) 1 NC_004917.1 hypothetical protein 523923 1493598 HH0544 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860075.1 523699 R 235279 CDS NP_860076.1 32266044 1493599 complement(523978..525849) 1 NC_004917.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; RNA polymerase sigma factor RpoD 525849 rpoD 1493599 rpoD Helicobacter hepaticus ATCC 51449 RNA polymerase sigma factor RpoD NP_860076.1 523978 R 235279 CDS NP_860077.1 32266045 1493600 complement(525972..526919) 1 NC_004917.1 Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; ferrodoxin oxidoreductase beta subunit 526919 porB 1493600 porB Helicobacter hepaticus ATCC 51449 ferrodoxin oxidoreductase beta subunit NP_860077.1 525972 R 235279 CDS NP_860078.1 32266046 1493601 complement(526930..528150) 1 NC_004917.1 Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin; pyruvate flavodoxin oxidoreductase subunit alpha 528150 porA 1493601 porA Helicobacter hepaticus ATCC 51449 pyruvate flavodoxin oxidoreductase subunit alpha NP_860078.1 526930 R 235279 CDS NP_860079.1 32266047 1493602 complement(528162..528572) 1 NC_004917.1 pyruvate flavodoxin oxidoreductase subunit delta 528572 porD 1493602 porD Helicobacter hepaticus ATCC 51449 pyruvate flavodoxin oxidoreductase subunit delta NP_860079.1 528162 R 235279 CDS NP_860080.1 32266048 1493603 complement(528592..529152) 1 NC_004917.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; pyruvate flavodoxin oxidoreductase subunit gamma 529152 porG 1493603 porG Helicobacter hepaticus ATCC 51449 pyruvate flavodoxin oxidoreductase subunit gamma NP_860080.1 528592 R 235279 CDS NP_860081.1 32266049 1493604 complement(529245..529805) 1 NC_004917.1 hypothetical protein 529805 1493604 HH0550 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860081.1 529245 R 235279 CDS NP_860082.1 32266050 1493605 complement(529802..530215) 1 NC_004917.1 hypothetical protein 530215 1493605 HH0551 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860082.1 529802 R 235279 CDS NP_860083.1 32266051 1493606 complement(530256..530387) 1 NC_004917.1 hypothetical protein 530387 1493606 HH0552 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860083.1 530256 R 235279 CDS NP_860084.1 32266052 1493607 complement(530406..531095) 1 NC_004917.1 hypothetical protein 531095 1493607 HH0553 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860084.1 530406 R 235279 CDS NP_860085.1 32266053 1493608 complement(531320..531901) 1 NC_004917.1 predicted secreted protein; hypothetical protein 531901 1493608 HH0554 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860085.1 531320 R 235279 CDS NP_860086.1 32266054 1493609 complement(532007..533854) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 533854 1493609 HH0555 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860086.1 532007 R 235279 CDS NP_860087.1 32266055 1493610 complement(533866..533958) 1 NC_004917.1 hypothetical protein 533958 1493610 HH0556 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860087.1 533866 R 235279 CDS NP_860088.1 32266056 1493611 534065..535198 1 NC_004917.1 hypothetical protein 535198 1493611 HH0557 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860088.1 534065 D 235279 CDS NP_860089.1 32266057 1493612 535467..536465 1 NC_004917.1 catalyzes a two-step reaction, first charging a tryptophan molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; tryptophanyl-tRNA synthetase 536465 trpS 1493612 trpS Helicobacter hepaticus ATCC 51449 tryptophanyl-tRNA synthetase NP_860089.1 535467 D 235279 CDS NP_860090.1 32266058 1493613 536462..537742 1 NC_004917.1 predicted secreted protein; hypothetical protein 537742 1493613 HH0559 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860090.1 536462 D 235279 CDS NP_860091.1 32266059 1493614 537878..539317 1 NC_004917.1 glutamine synthase 539317 glnA 1493614 glnA Helicobacter hepaticus ATCC 51449 glutamine synthase NP_860091.1 537878 D 235279 CDS NP_860092.1 32266060 1493615 complement(539340..539819) 1 NC_004917.1 similar to Campylobacter jejuni CJ0829c; hypothetical protein 539819 1493615 HH0561 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860092.1 539340 R 235279 CDS NP_860093.1 32266061 1493616 540133..540405 1 NC_004917.1 hypothetical protein 540405 1493616 HH0562 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860093.1 540133 D 235279 CDS NP_860094.1 32266062 1493617 complement(540429..541409) 1 NC_004917.1 NifU-like protein 541409 yurV 1493617 yurV Helicobacter hepaticus ATCC 51449 NifU-like protein NP_860094.1 540429 R 235279 CDS NP_860095.1 32266063 1493618 complement(541609..542775) 1 NC_004917.1 catalyzes the removal of sulfur from cysteine to form alanine; cysteine desulfurase 542775 nifS 1493618 nifS Helicobacter hepaticus ATCC 51449 cysteine desulfurase NP_860095.1 541609 R 235279 CDS NP_860096.1 32266064 1493619 complement(542916..544292) 1 NC_004917.1 involved in type III protein export during flagellum assembly; flagellum-specific ATP synthase 544292 fliI 1493619 fliI Helicobacter hepaticus ATCC 51449 flagellum-specific ATP synthase NP_860096.1 542916 R 235279 CDS NP_860097.1 32266065 1493620 544365..545693 1 NC_004917.1 Tig; RopA; peptidyl-prolyl cis/trans isomerase; promotes folding of newly synthesized proteins; binds ribosomal 50S subunit; forms a homodimer; trigger factor 545693 tig 1493620 tig Helicobacter hepaticus ATCC 51449 trigger factor NP_860097.1 544365 D 235279 CDS NP_860098.1 32266066 1493621 545690..546280 1 NC_004917.1 hydrolyzes proteins to small peptides; with the ATPase subunits ClpA or ClpX, ClpP degrades specific substrates; ATP-dependent Clp protease proteolytic subunit 546280 clpP 1493621 clpP Helicobacter hepaticus ATCC 51449 ATP-dependent Clp protease proteolytic subunit NP_860098.1 545690 D 235279 CDS NP_860099.1 32266067 1493622 546302..547453 1 NC_004917.1 hypothetical protein 547453 1493622 HH0568 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860099.1 546302 D 235279 CDS NP_860100.1 32266068 1493623 547401..547946 1 NC_004917.1 cleaves off formyl group from N-terminal methionine residues of newly synthesized proteins; binds iron(2+); peptide deformylase 547946 def 1493623 def Helicobacter hepaticus ATCC 51449 peptide deformylase NP_860100.1 547401 D 235279 CDS NP_860101.1 32266069 1493624 548037..549476 1 NC_004917.1 competence protein ComM 549476 1493624 HH0570 Helicobacter hepaticus ATCC 51449 competence protein ComM NP_860101.1 548037 D 235279 CDS NP_860102.1 32266070 1493625 549501..549782 1 NC_004917.1 similar to Campylobacter jejuni CJ0510c; hypothetical protein 549782 1493625 HH0571 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860102.1 549501 D 235279 CDS NP_860103.1 32266071 1493626 complement(549792..550559) 1 NC_004917.1 similar to Campylobacter jejuni CJ1050c; Sir2 family protein; hypothetical protein 550559 1493626 HH0572 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860103.1 549792 R 235279 CDS NP_860104.1 32266072 1493627 complement(550610..552220) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 552220 1493627 HH0573 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860104.1 550610 R 235279 CDS NP_860105.1 32266073 1493628 complement(552226..552846) 1 NC_004917.1 hypothetical protein 552846 1493628 HH0574 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860105.1 552226 R 235279 CDS NP_860106.1 32266074 1493629 complement(552958..553560) 1 NC_004917.1 predicted secreted protein; hypothetical protein 553560 1493629 HH0575 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860106.1 552958 R 235279 CDS NP_860107.1 32266075 1493630 complement(553581..554846) 1 NC_004917.1 adds enolpyruvyl to UDP-N-acetylglucosamine as a component of cell wall formation; gram-positive bacteria have 2 copies of MurA which are active; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 554846 murA 1493630 murA Helicobacter hepaticus ATCC 51449 UDP-N-acetylglucosamine 1-carboxyvinyltransferase NP_860107.1 553581 R 235279 CDS NP_860108.1 32266076 1493631 complement(554863..555270) 1 NC_004917.1 similar to Helicobacter pylori JHP0592; predicted secreted protein; hypothetical protein 555270 1493631 HH0577 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860108.1 554863 R 235279 CDS NP_860109.1 32266077 1493632 complement(555263..556015) 1 NC_004917.1 UTP- glucose-1-phosphate uridylyltransferase 556015 galU 1493632 galU Helicobacter hepaticus ATCC 51449 UTP- glucose-1-phosphate uridylyltransferase NP_860109.1 555263 R 235279 CDS NP_860110.1 32266078 1493633 555999..556109 1 NC_004917.1 hypothetical protein 556109 1493633 HH0579 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860110.1 555999 D 235279 CDS NP_860111.1 32266079 1493634 complement(556106..557734) 1 NC_004917.1 similar to Campylobacter jejuni secreted transglycosylase CJ0843c; hypothetical protein 557734 1493634 HH0580 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860111.1 556106 R 235279 CDS NP_860112.1 32266080 1493635 complement(557756..558055) 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein CJ0844c; hypothetical protein 558055 1493635 HH0581 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860112.1 557756 R 235279 CDS NP_860113.1 32266081 1493636 complement(558081..559406) 1 NC_004917.1 charges one glutamine molecule and pairs it with tRNA(Gln); glutamylglutaminyl-tRNA synthetase 559406 gltX 1493636 gltX Helicobacter hepaticus ATCC 51449 glutamylglutaminyl-tRNA synthetase NP_860113.1 558081 R 235279 CDS NP_860114.1 32266082 1493637 complement(559406..559975) 1 NC_004917.1 similar to Helicobacter pylori JHP0349; hypothetical protein 559975 1493637 HH0583 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860114.1 559406 R 235279 CDS NP_860115.1 32266083 1493638 560485..560958 1 NC_004917.1 hypothetical protein 560958 1493638 HH0584 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860115.1 560485 D 235279 CDS NP_860116.1 32266084 1493639 complement(560961..562517) 1 NC_004917.1 predicted transporter protein; hypothetical protein 562517 1493639 HH0585 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860116.1 560961 R 235279 CDS NP_860117.1 32266085 1493640 562622..564709 1 NC_004917.1 similar to Helicobacter pylori CadA (JHP0727); cation transport ATPase 564709 1493640 HH0586 Helicobacter hepaticus ATCC 51449 cation transport ATPase NP_860117.1 562622 D 235279 CDS NP_860118.1 32266086 1493641 complement(564791..566167) 1 NC_004917.1 protein from Staphylococcus aureus has phosphodiesterase activity against 2'-3'-cAMP and 2'-3'-cGMP; phosphodiesterase 566167 1493641 HH0587 Helicobacter hepaticus ATCC 51449 phosphodiesterase NP_860118.1 564791 R 235279 CDS NP_860119.1 32266087 1493642 complement(566289..566993) 1 NC_004917.1 similar to Campylobacter jejuni CJ1208; possible 5-formyltetrahydrofolate cyclo-ligase; hypothetical protein 566993 1493642 HH0588 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860119.1 566289 R 235279 CDS NP_860120.1 32266088 1493643 566971..567660 1 NC_004917.1 similar to Campylobacter jejuni signal recognition particle protein; hypothetical protein 567660 1493643 HH0589 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860120.1 566971 D 235279 CDS NP_860121.1 32266089 1493644 567657..568538 1 NC_004917.1 signal recognition particle-docking GTPase FtsY 568538 ftsY 1493644 ftsY Helicobacter hepaticus ATCC 51449 signal recognition particle-docking GTPase FtsY NP_860121.1 567657 D 235279 CDS NP_860122.1 32266090 1493645 568538..569884 1 NC_004917.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; DNA repair protein RadA 569884 1493645 HH0591 Helicobacter hepaticus ATCC 51449 DNA repair protein RadA NP_860122.1 568538 D 235279 CDS NP_860123.1 32266091 1493646 570138..571514 1 NC_004917.1 similar to Campylobacter jejuni possible sugar transferase; hypothetical protein 571514 1493646 HH0592 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860123.1 570138 D 235279 CDS NP_860124.1 32266092 1493647 complement(571785..572096) 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; ATP synthase F0F1 subunit C 572096 atpE 1493647 atpE Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit C NP_860124.1 571785 R 235279 CDS NP_860125.1 32266093 1493648 complement(572204..574333) 1 NC_004917.1 polynucleotide phosphorylase 574333 pnp 1493648 pnp Helicobacter hepaticus ATCC 51449 polynucleotide phosphorylase NP_860125.1 572204 R 235279 CDS NP_860126.1 32266094 1493649 complement(574333..574998) 1 NC_004917.1 similar to Helicobacter pylori HP1214; hypothetical protein 574998 1493649 HH0595 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860126.1 574333 R 235279 CDS NP_860127.1 32266095 1493650 complement(575012..577144) 1 NC_004917.1 Imp/OstA-like; organic solvent tolerance protein 577144 1493650 HH0596 Helicobacter hepaticus ATCC 51449 organic solvent tolerance protein NP_860127.1 575012 R 235279 CDS NP_860128.1 32266096 1493651 complement(577222..577695) 1 NC_004917.1 similar to Campylobacter jejuni CJ1251; predicted membrane-associated; hypothetical protein 577695 1493651 HH0597 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860128.1 577222 R 235279 CDS NP_860129.1 32266097 1493652 complement(577692..578972) 1 NC_004917.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; phosphoribosylamine--glycine ligase 578972 purD 1493652 purD Helicobacter hepaticus ATCC 51449 phosphoribosylamine--glycine ligase NP_860129.1 577692 R 235279 CDS NP_860130.1 32266098 1493653 complement(579218..579973) 1 NC_004917.1 hypothetical protein 579973 1493653 HH0599 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860130.1 579218 R 235279 CDS NP_860131.1 32266099 1493654 580066..580167 1 NC_004917.1 hypothetical protein 580167 1493654 HH0600 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860131.1 580066 D 235279 CDS NP_860132.1 32266100 1493655 complement(580219..580965) 1 NC_004917.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; tRNA pseudouridine synthase A 580965 truA 1493655 truA Helicobacter hepaticus ATCC 51449 tRNA pseudouridine synthase A NP_860132.1 580219 R 235279 CDS NP_860133.1 32266101 1493656 complement(580965..581984) 1 NC_004917.1 similar to Helicobacter pylori JHP1018; predicted membrane-associated; hypothetical protein 581984 1493656 HH0602 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860133.1 580965 R 235279 CDS NP_860134.1 32266102 1493657 complement(581984..582631) 1 NC_004917.1 type IV prepilin peptidase HopD 582631 hopD 1493657 hopD Helicobacter hepaticus ATCC 51449 type IV prepilin peptidase HopD NP_860134.1 581984 R 235279 CDS NP_860135.1 32266103 1493658 complement(582647..583303) 1 NC_004917.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; protein-L-isoaspartate O-methyltransferase 583303 pcm 1493658 pcm Helicobacter hepaticus ATCC 51449 protein-L-isoaspartate O-methyltransferase NP_860135.1 582647 R 235279 CDS NP_860136.1 32266104 1493659 complement(583303..584040) 1 NC_004917.1 similar to Aquifex aeolicus AQ_103; hypothetical protein 584040 1493659 HH0605 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860136.1 583303 R 235279 CDS NP_860137.1 32266105 1493660 complement(584030..585079) 1 NC_004917.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; ribonucleotide-diphosphate reductase subunit beta 585079 nrdF 1493660 nrdF Helicobacter hepaticus ATCC 51449 ribonucleotide-diphosphate reductase subunit beta NP_860137.1 584030 R 235279 CDS NP_860138.1 32266106 1493661 complement(585188..585334) 1 NC_004917.1 hypothetical protein 585334 1493661 HH0607 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860138.1 585188 R 235279 CDS NP_860139.1 32266107 1493662 complement(585378..587267) 1 NC_004917.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; 1-deoxy-D-xylulose-5-phosphate synthase 587267 dxs 1493662 dxs Helicobacter hepaticus ATCC 51449 1-deoxy-D-xylulose-5-phosphate synthase NP_860139.1 585378 R 235279 CDS NP_860140.1 32266108 1493663 complement(587293..588126) 1 NC_004917.1 binds to and inhibits the function of flagella specific ATPase FliI; flagellar assembly protein H 588126 fliH 1493663 fliH Helicobacter hepaticus ATCC 51449 flagellar assembly protein H NP_860140.1 587293 R 235279 CDS NP_860141.1 32266109 1493664 complement(588113..589144) 1 NC_004917.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein G 589144 fliG 1493664 fliG Helicobacter hepaticus ATCC 51449 flagellar motor switch protein G NP_860141.1 588113 R 235279 CDS NP_860142.1 32266110 1493665 complement(589160..590872) 1 NC_004917.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; flagellar MS-ring protein 590872 fliF 1493665 fliF Helicobacter hepaticus ATCC 51449 flagellar MS-ring protein NP_860142.1 589160 R 235279 CDS NP_860143.1 32266111 1493666 complement(590882..591994) 1 NC_004917.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; histidinol-phosphate aminotransferase 591994 hisC 1493666 hisC Helicobacter hepaticus ATCC 51449 histidinol-phosphate aminotransferase NP_860143.1 590882 R 235279 CDS NP_860144.1 32266112 1493667 592187..593635 1 NC_004917.1 phosphohexosemutase 593635 glmM_1 1493667 glmM_1 Helicobacter hepaticus ATCC 51449 phosphohexosemutase NP_860144.1 592187 D 235279 CDS NP_860145.1 32266113 1493668 593645..594676 1 NC_004917.1 catalyzes the formation of N-carbamoyl-L-aspartate from (S)-dihydroorotate in pyrimidine biosynthesis; dihydroorotase 594676 pyrC_2 1493668 pyrC_2 Helicobacter hepaticus ATCC 51449 dihydroorotase NP_860145.1 593645 D 235279 CDS NP_860146.1 32266114 1493669 complement(594693..595808) 1 NC_004917.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 595808 hemN_2 1493669 hemN_2 Helicobacter hepaticus ATCC 51449 coproporphyrinogen III oxidase NP_860146.1 594693 R 235279 CDS NP_860147.1 32266115 1493670 595846..595956 1 NC_004917.1 hypothetical protein 595956 1493670 HH0616 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860147.1 595846 D 235279 CDS NP_860148.1 32266116 1493671 595982..596416 1 NC_004917.1 hydrolyzes diadenosine polyphosphate; dinucleoside polyphosphate hydrolase 596416 1493671 HH0617 Helicobacter hepaticus ATCC 51449 dinucleoside polyphosphate hydrolase NP_860148.1 595982 D 235279 CDS NP_860149.1 32266117 1493672 596478..597683 1 NC_004917.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP, in Bacillus, lysine sensitive; regulated by response to starvation.; aspartate kinase 597683 lysC 1493672 lysC Helicobacter hepaticus ATCC 51449 aspartate kinase NP_860149.1 596478 D 235279 CDS NP_860150.1 32266118 1493673 597631..598245 1 NC_004917.1 hypothetical protein 598245 1493673 HH0619 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860150.1 597631 D 235279 CDS NP_860151.1 32266119 1493674 598268..598888 1 NC_004917.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; DNA polymerase III subunit delta' 598888 holB 1493674 holB Helicobacter hepaticus ATCC 51449 DNA polymerase III subunit delta' NP_860151.1 598268 D 235279 CDS NP_860152.1 32266120 1493675 598966..600015 1 NC_004917.1 dihydropteroate synthase 600015 folP 1493675 folP Helicobacter hepaticus ATCC 51449 dihydropteroate synthase NP_860152.1 598966 D 235279 CDS NP_860153.1 32266121 1493676 600012..600998 1 NC_004917.1 hypothetical protein 600998 1493676 HH0622 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860153.1 600012 D 235279 CDS NP_860154.1 32266122 1493677 601070..602374 1 NC_004917.1 similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefF; hypothetical protein 602374 1493677 HH0623 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860154.1 601070 D 235279 CDS NP_860155.1 32266123 1493678 602371..603456 1 NC_004917.1 similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefE; hypothetical protein 603456 1493678 HH0624 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860155.1 602371 D 235279 CDS NP_860156.1 32266124 1493679 603456..606521 1 NC_004917.1 similar to Helicobacter pylori resistance-nodulation-division efflux system protein HefD; hypothetical protein 606521 1493679 HH0625 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860156.1 603456 D 235279 CDS NP_860157.1 32266125 1493680 complement(606522..607490) 1 NC_004917.1 similar to Campylobacter jejuni CJ0504c; hypothetical protein 607490 1493680 HH0626 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860157.1 606522 R 235279 CDS NP_860158.1 32266126 1493681 complement(607483..608577) 1 NC_004917.1 similar to degT family amidotransferases; hypothetical protein 608577 wlaK 1493681 wlaK Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860158.1 607483 R 235279 CDS NP_860159.1 32266127 1493682 complement(608630..609133) 1 NC_004917.1 catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; shikimate kinase 609133 aroK 1493682 aroK Helicobacter hepaticus ATCC 51449 shikimate kinase NP_860159.1 608630 R 235279 CDS NP_860160.1 32266128 1493683 complement(609136..609753) 1 NC_004917.1 similar to Helicobacter pylori JHP0144; predicted secreted protein; hypothetical protein 609753 1493683 HH0629 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860160.1 609136 R 235279 CDS NP_860161.1 32266129 1493684 complement(609750..610016) 1 NC_004917.1 similar to Campylobacter jejuni CJ1671c; predicted membrane-associated; hypothetical protein 610016 1493684 HH0630 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860161.1 609750 R 235279 CDS NP_860162.1 32266130 1493685 complement(610031..611308) 1 NC_004917.1 enolase; catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; phosphopyruvate hydratase 611308 eno 1493685 eno Helicobacter hepaticus ATCC 51449 phosphopyruvate hydratase NP_860162.1 610031 R 235279 CDS NP_860163.1 32266131 1493686 complement(611335..611553) 1 NC_004917.1 hypothetical protein 611553 1493686 HH0632 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860163.1 611335 R 235279 CDS NP_860164.1 32266132 1493687 complement(611572..612609) 1 NC_004917.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; recombinase A 612609 recA 1493687 recA Helicobacter hepaticus ATCC 51449 recombinase A NP_860164.1 611572 R 235279 CDS NP_860165.1 32266133 1493688 612710..613567 1 NC_004917.1 similar to Campylobacter jejuni CJ1674; hypothetical protein 613567 1493688 HH0634 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860165.1 612710 D 235279 CDS NP_860166.1 32266134 1493689 complement(613577..614644) 1 NC_004917.1 similar to Helicobacter pylori HP0567; predicted membrane-associated; hypothetical protein 614644 1493689 HH0635 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860166.1 613577 R 235279 CDS NP_860167.1 32266135 1493690 614897..616189 1 NC_004917.1 O-acetylhomoserine (thiol)-lyase MetY 616189 metY 1493690 metY Helicobacter hepaticus ATCC 51449 O-acetylhomoserine (thiol)-lyase MetY NP_860167.1 614897 D 235279 CDS NP_860168.1 32266136 1493691 616198..617079 1 NC_004917.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; homoserine O-succinyltransferase 617079 metA 1493691 metA Helicobacter hepaticus ATCC 51449 homoserine O-succinyltransferase NP_860168.1 616198 D 235279 CDS NP_860169.1 32266137 1493692 617111..617947 1 NC_004917.1 similar to Campylobacter jejuni CJ0705; hypothetical protein 617947 1493692 HH0638 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860169.1 617111 D 235279 CDS NP_860170.1 32266138 1493693 617980..618756 1 NC_004917.1 similar to Helicobacter pylori HP0958; hypothetical protein 618756 1493693 HH0639 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860170.1 617980 D 235279 CDS NP_860171.1 32266139 1493694 618784..620040 1 NC_004917.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; 3-deoxy-D-manno-octulosonic-acid transferase 620040 waaA 1493694 waaA Helicobacter hepaticus ATCC 51449 3-deoxy-D-manno-octulosonic-acid transferase NP_860171.1 618784 D 235279 CDS NP_860172.1 32266140 1493695 620040..620777 1 NC_004917.1 ribosomal pseudouridine synthase 620777 1493695 HH0641 Helicobacter hepaticus ATCC 51449 ribosomal pseudouridine synthase NP_860172.1 620040 D 235279 CDS NP_860173.1 32266141 1493696 620783..621367 1 NC_004917.1 hypothetical protein 621367 1493696 HH0642 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860173.1 620783 D 235279 CDS NP_860174.1 32266142 1493697 complement(621382..622275) 1 NC_004917.1 predicted secreted protein; hypothetical protein 622275 1493697 HH0643 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860174.1 621382 R 235279 CDS NP_860175.1 32266143 1493698 complement(622353..623693) 1 NC_004917.1 UDP-glucose 6-dehydrogenase 623693 kfiD 1493698 kfiD Helicobacter hepaticus ATCC 51449 UDP-glucose 6-dehydrogenase NP_860175.1 622353 R 235279 CDS NP_860176.1 32266144 1493699 complement(623729..624268) 1 NC_004917.1 hypothetical protein 624268 1493699 HH0645 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860176.1 623729 R 235279 CDS NP_860177.1 32266145 1493700 complement(624464..624742) 1 NC_004917.1 ferredoxin 624742 fdxA 1493700 fdxA Helicobacter hepaticus ATCC 51449 ferredoxin NP_860177.1 624464 R 235279 CDS NP_860178.1 32266146 1493701 624954..625892 1 NC_004917.1 nucleotide sugar dehydratase 625892 1493701 HH0647 Helicobacter hepaticus ATCC 51449 nucleotide sugar dehydratase NP_860178.1 624954 D 235279 CDS NP_860179.1 32266147 1493702 625889..626902 1 NC_004917.1 similar to Dichelobacter nodosus lipopolysaccharide biosynthesis protein LpsA; hypothetical protein 626902 1493702 HH0648 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860179.1 625889 D 235279 CDS NP_860180.1 32266148 1493703 complement(626953..628728) 1 NC_004917.1 L-lactate permease 628728 lldP 1493703 lldP Helicobacter hepaticus ATCC 51449 L-lactate permease NP_860180.1 626953 R 235279 CDS NP_860181.1 32266149 1493704 629022..629753 1 NC_004917.1 similar to Helicobacter pylori JHP0127; predicted secreted protein; hypothetical protein 629753 1493704 HH0650 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860181.1 629022 D 235279 CDS NP_860182.1 32266150 1493705 629756..631195 1 NC_004917.1 similar to Helicobacter pylori HP0138; hypothetical protein 631195 1493705 HH0651 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860182.1 629756 D 235279 CDS NP_860183.1 32266151 1493706 631188..631844 1 NC_004917.1 similar to Helicobacter pylori JHP0125; hypothetical protein 631844 1493706 HH0652 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860183.1 631188 D 235279 CDS NP_860184.1 32266152 1493707 631855..632262 1 NC_004917.1 possible molybdenum transport protein ModE; hypothetical protein 632262 modE 1493707 modE Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860184.1 631855 D 235279 CDS NP_860185.1 32266153 1493708 632336..633109 1 NC_004917.1 molybdenum-binding periplasmic protein ModA 633109 modA 1493708 modA Helicobacter hepaticus ATCC 51449 molybdenum-binding periplasmic protein ModA NP_860185.1 632336 D 235279 CDS NP_860186.1 32266154 1493709 633131..633547 1 NC_004917.1 hypothetical protein 633547 1493709 HH0655 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860186.1 633131 D 235279 CDS NP_860187.1 32266155 1493710 633547..634224 1 NC_004917.1 molybdenum ABC transporter permease component ModB 634224 modB 1493710 modB Helicobacter hepaticus ATCC 51449 molybdenum ABC transporter permease component ModB NP_860187.1 633547 D 235279 CDS NP_860188.1 32266156 1493711 634221..635111 1 NC_004917.1 molybdenum ABC transporter ATP-binding component ModC 635111 modC 1493711 modC Helicobacter hepaticus ATCC 51449 molybdenum ABC transporter ATP-binding component ModC NP_860188.1 634221 D 235279 CDS NP_860189.1 32266157 1493712 complement(635116..636438) 1 NC_004917.1 similar to Campylobacter jejuni CJ0701; predicted protease; hypothetical protein 636438 1493712 HH0658 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860189.1 635116 R 235279 CDS NP_860190.1 32266158 1493713 complement(636438..637094) 1 NC_004917.1 similar to Helicobacter pylori JHP0156; hypothetical protein 637094 1493713 HH0659 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860190.1 636438 R 235279 CDS NP_860191.1 32266159 1493714 complement(637221..638321) 1 NC_004917.1 recognizes the termination signals UGA and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF2; in some organisms control of PrfB protein levels is maintained through a +1 ribosomal frameshifting mechanism; this protein is similar to release factor 1; peptide chain release factor 2 638321 prfB 1493714 prfB Helicobacter hepaticus ATCC 51449 peptide chain release factor 2 NP_860191.1 637221 R 235279 CDS NP_860192.1 32266160 1493715 complement(638447..640726) 1 NC_004917.1 similar to Helicobacter pylori HP0839; predicted outer membrane protein; hypothetical protein 640726 1493715 HH0661 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860192.1 638447 R 235279 CDS NP_860193.1 32266161 1493716 complement(640898..642034) 1 NC_004917.1 L-asparaginase 642034 ansB 1493716 ansB Helicobacter hepaticus ATCC 51449 L-asparaginase NP_860193.1 640898 R 235279 CDS NP_860194.1 32266162 1493717 complement(642110..643987) 1 NC_004917.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; molecular chaperone DnaK 643987 dnaK 1493717 dnaK Helicobacter hepaticus ATCC 51449 molecular chaperone DnaK NP_860194.1 642110 R 235279 CDS NP_860195.1 32266163 1493718 complement(644009..644566) 1 NC_004917.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; heat shock protein GrpE 644566 grpE 1493718 grpE Helicobacter hepaticus ATCC 51449 heat shock protein GrpE NP_860195.1 644009 R 235279 CDS NP_860196.1 32266164 1493719 complement(644588..645382) 1 NC_004917.1 Acts as a negative regulator of the grpE-dnaK-dnaJ and groELS class I heat shock operons by preventing heat-shock induction; heat-inducible transcription repressor 645382 hrcA 1493719 hrcA Helicobacter hepaticus ATCC 51449 heat-inducible transcription repressor NP_860196.1 644588 R 235279 CDS NP_860197.1 32266165 1493720 645624..645725 1 NC_004917.1 hypothetical protein 645725 1493720 HH0666 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860197.1 645624 D 235279 CDS NP_860198.1 32266166 1493721 645722..646345 1 NC_004917.1 similar to Helicobacter pylori HP0112; hypothetical protein 646345 1493721 HH0667 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860198.1 645722 D 235279 CDS NP_860199.1 32266167 1493722 646362..647729 1 NC_004917.1 predicted peptidase; hypothetical protein 647729 1493722 HH0668 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860199.1 646362 D 235279 CDS NP_860200.2 161546630 1493723 647729..648763 1 NC_004917.1 catalyzes the reduction of N-acetyl-5-glutamyl phosphate to N-acetyl-L-glutamate 5-semialdehyde in arginine biosynthesis and the reduction of N-acetyl-gamma-aminoadipyl-phosphate to N-acetyl-L-aminoadipate-semialdehyde in lysine biosynthesis; involved in both the arginine and lysine biosynthetic pathways; lysine is produced via the AAA pathway, lysine from alpha-aminoadipate; N-acetyl-gamma-glutamyl-phosphate reductase 648763 argC 1493723 argC Helicobacter hepaticus ATCC 51449 N-acetyl-gamma-glutamyl-phosphate reductase NP_860200.2 647729 D 235279 CDS NP_860201.1 32266169 1493724 648773..649678 1 NC_004917.1 similar to Helicobacter pylori JHP0987; hypothetical protein 649678 1493724 HH0670 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860201.1 648773 D 235279 CDS NP_860202.1 32266170 1493725 649679..650629 1 NC_004917.1 similar to Helicobacter pylori HP0393 (CheV3); chemotaxis signal transduction protein CheV 650629 1493725 HH0671 Helicobacter hepaticus ATCC 51449 chemotaxis signal transduction protein CheV NP_860202.1 649679 D 235279 CDS NP_860203.1 32266171 1493726 650672..653029 1 NC_004917.1 chemotaxis protein histidine kinase CheA 653029 cheA 1493726 cheA Helicobacter hepaticus ATCC 51449 chemotaxis protein histidine kinase CheA NP_860203.1 650672 D 235279 CDS NP_860204.1 32266172 1493727 653031..653522 1 NC_004917.1 chemotaxis signal transduction response regulator CheW 653522 cheW 1493727 cheW Helicobacter hepaticus ATCC 51449 chemotaxis signal transduction response regulator CheW NP_860204.1 653031 D 235279 CDS NP_860205.1 32266173 1493728 complement(653611..654438) 1 NC_004917.1 similar to Campylobacter jejuni CJ0282; hypothetical protein 654438 1493728 HH0674 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860205.1 653611 R 235279 CDS NP_860206.1 32266174 1493729 655154..656587 1 NC_004917.1 probable mannose-1-phosphate guanylyltransferase ManC; hypothetical protein 656587 1493729 HH0675 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860206.1 655154 D 235279 CDS NP_860207.1 32266175 1493730 656587..657765 1 NC_004917.1 similar to Helicobacter pylori HP0421; predicted glycosyl transferase; hypothetical protein 657765 1493730 HH0676 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860207.1 656587 D 235279 CDS NP_860208.1 32266176 1493731 657892..658305 1 NC_004917.1 nucleoside diphosphate kinase 658305 ndk 1493731 ndk Helicobacter hepaticus ATCC 51449 nucleoside diphosphate kinase NP_860208.1 657892 D 235279 CDS NP_860209.1 32266177 1493732 658306..658659 1 NC_004917.1 similar to Campylobacter jejuni small hydrophobic protein; hypothetical protein 658659 1493732 HH0678 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860209.1 658306 D 235279 CDS NP_860210.1 32266178 1493733 658674..658823 1 NC_004917.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; 50S ribosomal protein L32 658823 rpmF 1493733 rpmF Helicobacter hepaticus ATCC 51449 50S ribosomal protein L32 NP_860210.1 658674 D 235279 CDS NP_860211.1 32266179 1493734 658845..659846 1 NC_004917.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsY; glycerol-3-phosphate acyltransferase PlsX 659846 plsX 1493734 plsX Helicobacter hepaticus ATCC 51449 glycerol-3-phosphate acyltransferase PlsX NP_860211.1 658845 D 235279 CDS NP_860212.1 32266180 1493735 659856..660854 1 NC_004917.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; 3-oxoacyl-ACP synthase 660854 fabH 1493735 fabH Helicobacter hepaticus ATCC 51449 3-oxoacyl-ACP synthase NP_860212.1 659856 D 235279 CDS NP_860213.1 32266181 1493736 660935..663178 1 NC_004917.1 similar to Helicobacter pylori HP0791; probable cation transport ATPase; hypothetical protein 663178 1493736 HH0682 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860213.1 660935 D 235279 CDS NP_860214.1 32266182 1493737 663198..663410 1 NC_004917.1 similar to Helicobacter pylori copper ion binding protein HP1073; hypothetical protein 663410 1493737 HH0683 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860214.1 663198 D 235279 CDS NP_860215.1 32266183 1493738 663394..665109 1 NC_004917.1 multidrug resistance protein MsbA 665109 msbA 1493738 msbA Helicobacter hepaticus ATCC 51449 multidrug resistance protein MsbA NP_860215.1 663394 D 235279 CDS NP_860216.1 32266184 1493739 665272..666042 1 NC_004917.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; fumarate reductase cytochrome b-556 subunit 666042 frdC 1493739 frdC Helicobacter hepaticus ATCC 51449 fumarate reductase cytochrome b-556 subunit NP_860216.1 665272 D 235279 CDS NP_860217.1 32266185 1493740 666043..668019 1 NC_004917.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase flavoprotein subunit 668019 frdA 1493740 frdA Helicobacter hepaticus ATCC 51449 fumarate reductase flavoprotein subunit NP_860217.1 666043 D 235279 CDS NP_860218.1 32266186 1493741 668019..668762 1 NC_004917.1 part of three member fumarate reductase enzyme complex FrdABC which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdC is the cytochrome b-556 subunit; the catalytic subunits are similar to succinate dehydrogenase SdhAB; fumarate reductase iron-sulfur subunit 668762 frdB 1493741 frdB Helicobacter hepaticus ATCC 51449 fumarate reductase iron-sulfur subunit NP_860218.1 668019 D 235279 CDS NP_860219.1 32266187 1493742 668814..670376 1 NC_004917.1 similar to Helicobacter pylori HP0190; predicted secreted protein; hypothetical protein 670376 1493742 HH0688 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860219.1 668814 D 235279 CDS NP_860220.1 32266188 1493743 complement(670394..670783) 1 NC_004917.1 hypothetical protein 670783 1493743 HH0689 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860220.1 670394 R 235279 CDS NP_860221.1 32266189 1493744 complement(670767..670973) 1 NC_004917.1 similar to Campylobacter jejuni CJ1047c; hypothetical protein 670973 1493744 HH0690 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860221.1 670767 R 235279 CDS NP_860222.1 32266190 1493745 complement(670973..672337) 1 NC_004917.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 672337 glmU 1493745 glmU Helicobacter hepaticus ATCC 51449 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase NP_860222.1 670973 R 235279 CDS NP_860223.1 32266191 1493746 672436..673233 1 NC_004917.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliP 673233 fliP 1493746 fliP Helicobacter hepaticus ATCC 51449 flagellar biosynthesis protein FliP NP_860223.1 672436 D 235279 CDS NP_860224.1 32266192 1493747 673245..674459 1 NC_004917.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; tRNA (uracil-5-)-methyltransferase 674459 trmA 1493747 trmA Helicobacter hepaticus ATCC 51449 tRNA (uracil-5-)-methyltransferase NP_860224.1 673245 D 235279 CDS NP_860225.1 32266193 1493748 complement(674462..675634) 1 NC_004917.1 similar to Campylobacter jejuni CJ1241; possible permease; hypothetical protein 675634 1493748 HH0694 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860225.1 674462 R 235279 CDS NP_860226.1 32266194 1493749 complement(675663..676373) 1 NC_004917.1 hypothetical protein 676373 1493749 HH0695 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860226.1 675663 R 235279 CDS NP_860227.1 32266195 1493750 676571..677365 1 NC_004917.1 similar to Helicobacter pylori JHP0604; hypothetical protein 677365 1493750 HH0696 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860227.1 676571 D 235279 CDS NP_860228.1 32266196 1493751 677368..678453 1 NC_004917.1 similar to Helicobacter pylori HP0660; predicted secreted protein; hypothetical protein 678453 1493751 HH0697 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860228.1 677368 D 235279 CDS NP_860229.1 32266197 1493752 678422..678868 1 NC_004917.1 An endonuclease that specifically degrades the RNA strand of RNA-DNA hybrids; ribonuclease H 678868 rnhA 1493752 rnhA Helicobacter hepaticus ATCC 51449 ribonuclease H NP_860229.1 678422 D 235279 CDS NP_860230.1 32266198 1493753 678861..679583 1 NC_004917.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; ribonuclease III 679583 rnc 1493753 rnc Helicobacter hepaticus ATCC 51449 ribonuclease III NP_860230.1 678861 D 235279 CDS NP_860231.1 32266199 1493754 679580..680656 1 NC_004917.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; chorismate synthase 680656 aroC 1493754 aroC Helicobacter hepaticus ATCC 51449 chorismate synthase NP_860231.1 679580 D 235279 CDS NP_860232.1 32266200 1493755 680733..682076 1 NC_004917.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit A 682076 gatA 1493755 gatA Helicobacter hepaticus ATCC 51449 aspartyl/glutamyl-tRNA amidotransferase subunit A NP_860232.1 680733 D 235279 CDS NP_860233.1 32266201 1493756 682096..683541 1 NC_004917.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; inosine 5'-monophosphate dehydrogenase 683541 guaB 1493756 guaB Helicobacter hepaticus ATCC 51449 inosine 5'-monophosphate dehydrogenase NP_860233.1 682096 D 235279 CDS NP_860234.1 32266202 1493757 683552..683800 1 NC_004917.1 hypothetical protein 683800 1493757 HH0703 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860234.1 683552 D 235279 CDS NP_860235.1 32266203 1493758 683806..684582 1 NC_004917.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; flagellar biosynthesis protein FliR 684582 fliR 1493758 fliR Helicobacter hepaticus ATCC 51449 flagellar biosynthesis protein FliR NP_860235.1 683806 D 235279 CDS NP_860236.1 32266204 1493759 complement(684584..685150) 1 NC_004917.1 membrane-associated cation-independent thermostable nuclease; preferentially cleaves ss-DNA; involved in DNA transformation; nuclease NucT 685150 1493759 HH0705 Helicobacter hepaticus ATCC 51449 nuclease NucT NP_860236.1 684584 R 235279 CDS NP_860237.1 32266205 1493760 685229..687043 1 NC_004917.1 similar to Campylobacter jejuni CJ1178c; hypothetical protein 687043 1493760 HH0706 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860237.1 685229 D 235279 CDS NP_860238.1 32266206 1493761 687043..687645 1 NC_004917.1 Essential for recycling GMP and indirectly, cGMP; guanylate kinase 687645 gmk 1493761 gmk Helicobacter hepaticus ATCC 51449 guanylate kinase NP_860238.1 687043 D 235279 CDS NP_860239.1 32266207 1493762 687718..687966 1 NC_004917.1 similar to Campylobacter jejuni CJ1176c; component of Sec-independent protein secretion pathway TatA 687966 1493762 HH0708 Helicobacter hepaticus ATCC 51449 component of Sec-independent protein secretion pathway TatA NP_860239.1 687718 D 235279 CDS NP_860240.1 32266208 1493763 687966..689612 1 NC_004917.1 catalyzes a two-step reaction, first charging an arginine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class-I aminoacyl-tRNA synthetase; arginyl-tRNA synthetase 689612 argS 1493763 argS Helicobacter hepaticus ATCC 51449 arginyl-tRNA synthetase NP_860240.1 687966 D 235279 CDS NP_860241.1 32266209 1493764 689614..690309 1 NC_004917.1 similar to Helicobacter pylori HP1331; predicted membrane-associated; hypothetical protein 690309 1493764 HH0710 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860241.1 689614 D 235279 CDS NP_860242.1 32266210 1493765 690299..690640 1 NC_004917.1 similar to Helicobacter pylori HP1330; predicted membrane-associated; hypothetical protein 690640 1493765 HH0711 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860242.1 690299 D 235279 CDS NP_860243.1 32266211 1493766 complement(690671..691168) 1 NC_004917.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin FldA 691168 fldA 1493766 fldA Helicobacter hepaticus ATCC 51449 flavodoxin FldA NP_860243.1 690671 R 235279 CDS NP_860244.1 32266212 1493767 complement(691320..692126) 1 NC_004917.1 similar to Helicobacter pylori HP1564; predicted outer membrane protein; hypothetical protein 692126 yaeC 1493767 yaeC Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860244.1 691320 R 235279 CDS NP_860245.1 32266213 1493768 complement(692177..693010) 1 NC_004917.1 similar to Helicobacter pylori outer membrane protein HP1564; hypothetical protein 693010 1493768 HH0714 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860245.1 692177 R 235279 CDS NP_860246.1 32266214 1493769 complement(693034..693744) 1 NC_004917.1 similar to Helicobacter pylori HP1577; predicted ABC transporter permease component; hypothetical protein 693744 1493769 HH0715 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860246.1 693034 R 235279 CDS NP_860247.1 32266215 1493770 complement(693755..694810) 1 NC_004917.1 part of the metNIQ transport system for methionine; DL-methionine transporter ATP-binding subunit 694810 metN 1493770 metN Helicobacter hepaticus ATCC 51449 DL-methionine transporter ATP-binding subunit NP_860247.1 693755 R 235279 CDS NP_860248.1 32266216 1493771 complement(694903..695679) 1 NC_004917.1 similar to Helicobacter pylori HP1459; possible pseudouridine synthase; hypothetical protein 695679 1493771 HH0717 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860248.1 694903 R 235279 CDS NP_860249.1 32266217 1493772 complement(695680..696813) 1 NC_004917.1 similar to Helicobacter pylori JHP0571; predicted secreted protein; hypothetical protein 696813 1493772 HH0718 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860249.1 695680 R 235279 CDS NP_860250.1 32266218 1493773 complement(696880..698088) 1 NC_004917.1 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 698088 dapD 1493773 dapD Helicobacter hepaticus ATCC 51449 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase NP_860250.1 696880 R 235279 CDS NP_860251.1 32266219 1493774 complement(698313..698786) 1 NC_004917.1 predicted secreted protein; hypothetical protein 698786 1493774 HH0720 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860251.1 698313 R 235279 CDS NP_860252.1 32266220 1493775 699209..701395 1 NC_004917.1 similar to Campylobacter jejuni/coli siderophore receptor protein CfrA; hypothetical protein 701395 cfrA 1493775 cfrA Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860252.1 699209 D 235279 CDS NP_860253.1 32266221 1493776 701495..702934 1 NC_004917.1 catalyzes the formation of fumarate from aspartate; aspartate ammonia-lyase 702934 aspA 1493776 aspA Helicobacter hepaticus ATCC 51449 aspartate ammonia-lyase NP_860253.1 701495 D 235279 CDS NP_860254.1 32266222 1493777 703014..704441 1 NC_004917.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; anaerobic C4-dicarboxylate transporter 704441 dcuB 1493777 dcuB Helicobacter hepaticus ATCC 51449 anaerobic C4-dicarboxylate transporter NP_860254.1 703014 D 235279 CDS NP_860255.1 32266223 1493778 704468..704572 1 NC_004917.1 predicted membrane-associated; hypothetical protein 704572 1493778 HH0724 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860255.1 704468 D 235279 CDS NP_860256.1 32266224 1493779 704613..706670 1 NC_004917.1 similar to methyl-accepting chemotaxis protein; similar to Campylobacter jejuni CJ1506c; hypothetical protein 706670 1493779 HH0725 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860256.1 704613 D 235279 CDS NP_860257.1 32266225 1493780 complement(706756..707682) 1 NC_004917.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; acetyl-CoA carboxylase carboxyltransferase subunit alpha 707682 accA 1493780 accA Helicobacter hepaticus ATCC 51449 acetyl-CoA carboxylase carboxyltransferase subunit alpha NP_860257.1 706756 R 235279 CDS NP_860258.1 32266226 1493781 complement(707695..708930) 1 NC_004917.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; 3-oxoacyl-ACP synthase 708930 fabF 1493781 fabF Helicobacter hepaticus ATCC 51449 3-oxoacyl-ACP synthase NP_860258.1 707695 R 235279 CDS NP_860259.1 32266227 1493782 complement(709006..709236) 1 NC_004917.1 acyl carrier protein 709236 1493782 HH0728 Helicobacter hepaticus ATCC 51449 acyl carrier protein NP_860259.1 709006 R 235279 CDS NP_860260.1 32266228 1493783 709267..709455 1 NC_004917.1 hypothetical protein 709455 1493783 HH0729 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860260.1 709267 D 235279 CDS NP_860261.1 32266229 1493784 complement(709452..710132) 1 NC_004917.1 hypothetical protein 710132 1493784 HH0730 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860261.1 709452 R 235279 CDS NP_860262.1 32266230 1493785 complement(710145..710300) 1 NC_004917.1 hypothetical protein 710300 1493785 HH0731 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860262.1 710145 R 235279 CDS NP_860263.1 32266231 1493786 complement(710397..711140) 1 NC_004917.1 Catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; 3-ketoacyl-ACP reductase 711140 fabG 1493786 fabG Helicobacter hepaticus ATCC 51449 3-ketoacyl-ACP reductase NP_860263.1 710397 R 235279 CDS NP_860264.1 32266232 1493787 complement(711191..713506) 1 NC_004917.1 similar to Helicobacter pylori HP0597; predicted penicillin binding protein; hypothetical protein 713506 1493787 HH0733 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860264.1 711191 R 235279 CDS NP_860265.1 32266233 1492423 complement(713503..718950) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 718950 1492423 HH0734 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860265.1 713503 R 235279 CDS NP_860266.1 32266234 1492424 complement(719034..719945) 1 NC_004917.1 similar to Helicobacter pylori HP0347; predicted pseudouridylate synthase; hypothetical protein 719945 sfhB 1492424 sfhB Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860266.1 719034 R 235279 CDS NP_860267.1 32266235 1492425 complement(720685..722130) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 722130 1492425 HH0736 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860267.1 720685 R 235279 CDS NP_860268.1 32266236 1492426 722273..722392 1 NC_004917.1 hypothetical protein 722392 1492426 HH0737 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860268.1 722273 D 235279 CDS NP_860269.1 32266237 1492427 722420..723247 1 NC_004917.1 amino-acid ABC transporter periplasmic solute-binding protein 723247 1492427 HH0738 Helicobacter hepaticus ATCC 51449 amino-acid ABC transporter periplasmic solute-binding protein NP_860269.1 722420 D 235279 CDS NP_860270.1 32266238 1492428 complement(723285..723782) 1 NC_004917.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; methionine sulfoxide reductase A 723782 msrA 1492428 msrA Helicobacter hepaticus ATCC 51449 methionine sulfoxide reductase A NP_860270.1 723285 R 235279 CDS NP_860271.1 32266239 1492429 723867..725237 1 NC_004917.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; selenocysteine synthase 725237 selA 1492429 selA Helicobacter hepaticus ATCC 51449 selenocysteine synthase NP_860271.1 723867 D 235279 CDS NP_860272.1 32266240 1492430 725248..727146 1 NC_004917.1 selenocysteine-specific elongation factor SelB 727146 selB 1492430 selB Helicobacter hepaticus ATCC 51449 selenocysteine-specific elongation factor SelB NP_860272.1 725248 D 235279 CDS NP_860273.1 32266241 1492431 727163..728266 1 NC_004917.1 hypothetical protein 728266 1492431 HH0742 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860273.1 727163 D 235279 CDS NP_860274.1 32266242 1492432 728277..729515 1 NC_004917.1 molybdopterin biosynthesis enzyme 729515 moeA_2 1492432 moeA_2 Helicobacter hepaticus ATCC 51449 molybdopterin biosynthesis enzyme NP_860274.1 728277 D 235279 CDS NP_860275.1 32266243 1492433 729543..729959 1 NC_004917.1 similar to Helicobacter pylori HP0031; hypothetical protein 729959 1492433 HH0744 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860275.1 729543 D 235279 CDS NP_860276.1 32266244 1492434 729969..731624 1 NC_004917.1 predicted secreted protein; hypothetical protein 731624 1492434 HH0745 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860276.1 729969 D 235279 CDS NP_860277.1 32266245 1492435 731701..732141 1 NC_004917.1 predicted secreted protein; hypothetical protein 732141 1492435 HH0746 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860277.1 731701 D 235279 CDS NP_860278.1 32266246 1492436 complement(732226..732339) 1 NC_004917.1 hypothetical protein 732339 1492436 HH0747 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860278.1 732226 R 235279 CDS NP_860279.1 32266247 1492437 complement(732416..733102) 1 NC_004917.1 hypothetical protein 733102 1492437 HH0748 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860279.1 732416 R 235279 CDS NP_860280.1 32266248 1492438 733425..733613 1 NC_004917.1 hypothetical protein 733613 1492438 HH0749 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860280.1 733425 D 235279 CDS NP_860281.1 32266249 1492439 733628..735880 1 NC_004917.1 hypothetical protein 735880 1492439 HH0750 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860281.1 733628 D 235279 CDS NP_860282.1 32266250 1492440 735939..736070 1 NC_004917.1 hypothetical protein 736070 1492440 HH0751 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860282.1 735939 D 235279 CDS NP_860283.1 32266251 1492441 736252..737124 1 NC_004917.1 similar to Campylobacter coli; predicted phage transposition protein MuB; hypothetical protein 737124 1492441 HH0752 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860283.1 736252 D 235279 CDS NP_860284.1 32266252 1492442 737135..737317 1 NC_004917.1 hypothetical protein 737317 1492442 HH0753 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860284.1 737135 D 235279 CDS NP_860285.1 32266253 1492443 737308..737787 1 NC_004917.1 similar to Campylobacter coli; predicted host-nuclease inhibitor protein Gam; hypothetical protein 737787 1492443 HH0754 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860285.1 737308 D 235279 CDS NP_860286.1 32266254 1492444 737818..738204 1 NC_004917.1 hypothetical protein 738204 1492444 HH0755 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860286.1 737818 D 235279 CDS NP_860287.1 32266255 1492445 738204..738455 1 NC_004917.1 hypothetical protein 738455 1492445 HH0756 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860287.1 738204 D 235279 CDS NP_860288.1 32266256 1492446 738627..738857 1 NC_004917.1 hypothetical protein 738857 1492446 HH0757 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860288.1 738627 D 235279 CDS NP_860289.1 32266257 1492447 738850..739353 1 NC_004917.1 hypothetical protein 739353 1492447 HH0758 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860289.1 738850 D 235279 CDS NP_860290.1 32266258 1492448 complement(739466..740005) 1 NC_004917.1 hypothetical protein 740005 1492448 HH0759 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860290.1 739466 R 235279 CDS NP_860291.1 32266259 1492449 complement(740016..741512) 1 NC_004917.1 hypothetical protein 741512 1492449 HH0760 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860291.1 740016 R 235279 CDS NP_860292.1 32266260 1492450 complement(741727..742557) 1 NC_004917.1 hypothetical protein 742557 1492450 HH0761 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860292.1 741727 R 235279 CDS NP_860293.1 32266261 1492451 742721..743074 1 NC_004917.1 predicted secreted protein; hypothetical protein 743074 1492451 HH0762 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860293.1 742721 D 235279 CDS NP_860294.1 32266262 1492452 743058..743267 1 NC_004917.1 predicted secreted protein; hypothetical protein 743267 1492452 HH0763 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860294.1 743058 D 235279 CDS NP_860295.1 32266263 1492453 743264..743452 1 NC_004917.1 predicted membrane-associated; hypothetical protein 743452 1492453 HH0764 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860295.1 743264 D 235279 CDS NP_860296.1 32266264 1492454 743449..743763 1 NC_004917.1 predicted membrane-associated; hypothetical protein 743763 1492454 HH0765 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860296.1 743449 D 235279 CDS NP_860297.1 32266265 1492455 743760..743864 1 NC_004917.1 predicted secreted protein; hypothetical protein 743864 1492455 HH0766 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860297.1 743760 D 235279 CDS NP_860298.1 32266266 1492456 743877..744443 1 NC_004917.1 hypothetical protein 744443 1492456 HH0767 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860298.1 743877 D 235279 CDS NP_860299.1 32266267 1492457 744506..745078 1 NC_004917.1 hypothetical protein 745078 1492457 HH0768 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860299.1 744506 D 235279 CDS NP_860300.1 32266268 1492458 745179..745484 1 NC_004917.1 hypothetical protein 745484 1492458 HH0769 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860300.1 745179 D 235279 CDS NP_860301.1 32266269 1492459 745547..745738 1 NC_004917.1 hypothetical protein 745738 1492459 HH0770 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860301.1 745547 D 235279 CDS NP_860302.1 32266270 1492460 745735..747402 1 NC_004917.1 predicted membrane-associated; hypothetical protein 747402 1492460 HH0771 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860302.1 745735 D 235279 CDS NP_860303.1 32266271 1492461 747418..748290 1 NC_004917.1 hypothetical protein 748290 1492461 HH0772 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860303.1 747418 D 235279 CDS NP_860304.1 32266272 1492462 748506..750071 1 NC_004917.1 similar to Campylobacter jejuni CJ1135; predicted glycosyl transferase; hypothetical protein 750071 1492462 HH0773 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860304.1 748506 D 235279 CDS NP_860305.1 32266273 1492463 complement(750112..751998) 1 NC_004917.1 similar to Helicobacter pylori JHP1312; predicted membrane-associated; hypothetical protein 751998 1492463 HH0774 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860305.1 750112 R 235279 CDS NP_860306.1 32266274 1492464 complement(751995..752681) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 752681 1492464 HH0775 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860306.1 751995 R 235279 CDS NP_860307.1 32266275 1492465 complement(752678..753421) 1 NC_004917.1 ATP binding component; ABC transporter 753421 yhcG 1492465 yhcG Helicobacter hepaticus ATCC 51449 ABC transporter NP_860307.1 752678 R 235279 CDS NP_860308.1 32266276 1492466 complement(753513..753725) 1 NC_004917.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; 30S ribosomal protein S21 753725 rpsU 1492466 rpsU Helicobacter hepaticus ATCC 51449 30S ribosomal protein S21 NP_860308.1 753513 R 235279 CDS NP_860309.1 32266277 1492467 complement(753962..755176) 1 NC_004917.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; cell division protein FtsZ 755176 ftsZ 1492467 ftsZ Helicobacter hepaticus ATCC 51449 cell division protein FtsZ NP_860309.1 753962 R 235279 CDS NP_860310.1 32266278 1492468 complement(755189..756559) 1 NC_004917.1 cell division protein FtsA 756559 ftsA 1492468 ftsA Helicobacter hepaticus ATCC 51449 cell division protein FtsA NP_860310.1 755189 R 235279 CDS NP_860311.1 32266279 1492469 complement(756567..758066) 1 NC_004917.1 similar to Helicobacter pylori JHP0911; predicted secreted protein; hypothetical protein 758066 1492469 HH0780 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860311.1 756567 R 235279 CDS NP_860312.1 32266280 1492470 complement(758093..758221) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 758221 1492470 HH0781 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860312.1 758093 R 235279 CDS NP_860313.1 32266281 1492471 complement(758294..759436) 1 NC_004917.1 cell division membrane protein FtsW/MrdB/SpoVE 759436 ftsW_1 1492471 ftsW_1 Helicobacter hepaticus ATCC 51449 cell division membrane protein FtsW/MrdB/SpoVE NP_860313.1 758294 R 235279 CDS NP_860314.1 32266282 1492472 759497..760552 1 NC_004917.1 ribosomal pseudouridine synthase 760552 1492472 HH0783 Helicobacter hepaticus ATCC 51449 ribosomal pseudouridine synthase NP_860314.1 759497 D 235279 CDS NP_860315.1 32266283 1492473 760482..761747 1 NC_004917.1 similar to Helicobacter pylori JHP0683; predicted secreted protein; hypothetical protein 761747 1492473 HH0784 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860315.1 760482 D 235279 CDS NP_860316.1 32266284 1492474 761747..762937 1 NC_004917.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; tRNA (guanine-N(7)-)-methyltransferase 762937 trmB 1492474 trmB Helicobacter hepaticus ATCC 51449 tRNA (guanine-N(7)-)-methyltransferase NP_860316.1 761747 D 235279 CDS NP_860317.1 32266285 1492475 762941..763609 1 NC_004917.1 ATP-binding component; possibly involved in cell division; ABC transporter 763609 ftsE 1492475 ftsE Helicobacter hepaticus ATCC 51449 ABC transporter NP_860317.1 762941 D 235279 CDS NP_860318.1 32266286 1492476 763596..764405 1 NC_004917.1 cell division protein FtsX 764405 ftsX 1492476 ftsX Helicobacter hepaticus ATCC 51449 cell division protein FtsX NP_860318.1 763596 D 235279 CDS NP_860319.1 32266287 1492477 764353..765624 1 NC_004917.1 similar to Helicobacter pylori HP0750; hypothetical protein 765624 1492477 HH0788 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860319.1 764353 D 235279 CDS NP_860320.1 32266288 1492478 765679..766071 1 NC_004917.1 possibly involved in flagella export; flagellar protein FlaG 766071 flaG 1492478 flaG Helicobacter hepaticus ATCC 51449 flagellar protein FlaG NP_860320.1 765679 D 235279 CDS NP_860321.1 32266289 1492479 766121..768169 1 NC_004917.1 involved in flagellin assembly; flagellar capping protein 768169 fliD 1492479 fliD Helicobacter hepaticus ATCC 51449 flagellar capping protein NP_860321.1 766121 D 235279 CDS NP_860322.1 32266290 1492480 768180..768563 1 NC_004917.1 flagellin specific chaperone; flagellar protein FliS 768563 fliS 1492480 fliS Helicobacter hepaticus ATCC 51449 flagellar protein FliS NP_860322.1 768180 D 235279 CDS NP_860323.1 32266291 1492481 768547..768780 1 NC_004917.1 similar to Helicobacter pylori HP0754; hypothetical protein 768780 1492481 HH0792 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860323.1 768547 D 235279 CDS NP_860324.1 32266292 1492482 768908..769195 1 NC_004917.1 similar to Campylobacter jejuni CJ0913c; histone-like DNA-binding protein HU (HupB) 769195 1492482 HH0793 Helicobacter hepaticus ATCC 51449 histone-like DNA-binding protein HU (HupB) NP_860324.1 768908 D 235279 CDS NP_860325.1 32266293 1492483 complement(769221..770156) 1 NC_004917.1 catalyzes the NAD(P)H-dependent reduction of glycerol 3-phosphate to glycerone phosphate; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 770156 gpsA 1492483 gpsA Helicobacter hepaticus ATCC 51449 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase NP_860325.1 769221 R 235279 CDS NP_860326.1 32266294 1492484 complement(770200..770880) 1 NC_004917.1 predicted secreted protein; hypothetical protein 770880 1492484 HH0795 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860326.1 770200 R 235279 CDS NP_860327.1 32266295 1492485 771081..772505 1 NC_004917.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; aspartyl/glutamyl-tRNA amidotransferase subunit B 772505 gatB 1492485 gatB Helicobacter hepaticus ATCC 51449 aspartyl/glutamyl-tRNA amidotransferase subunit B NP_860327.1 771081 D 235279 CDS NP_860328.1 32266296 1492486 772873..775932 1 NC_004917.1 possible SNF2 family helicase; hypothetical protein 775932 1492486 HH0797 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860328.1 772873 D 235279 CDS NP_860329.1 32266297 1492487 775929..779099 1 NC_004917.1 similar to Helicobacter pylori JHP1409; predicted type II DNA modification enzyme (methyltransferase); hypothetical protein 779099 1492487 HH0798 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860329.1 775929 D 235279 CDS NP_860330.1 32266298 1492488 779190..780509 1 NC_004917.1 hypothetical protein 780509 1492488 HH0799 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860330.1 779190 D 235279 CDS NP_860331.1 32266299 1492489 780641..781690 1 NC_004917.1 similar to Helicobacter pylori JHP0346; hypothetical protein 781690 1492489 HH0800 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860331.1 780641 D 235279 CDS NP_860332.1 32266300 1492490 782105..782248 1 NC_004917.1 hypothetical protein 782248 1492490 HH0801 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860332.1 782105 D 235279 CDS NP_860333.1 32266301 1492491 782301..782450 1 NC_004917.1 hypothetical protein 782450 1492491 HH0802 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860333.1 782301 D 235279 CDS NP_860334.1 32266302 1492492 complement(782535..782630) 1 NC_004917.1 hypothetical protein 782630 1492492 HH0803 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860334.1 782535 R 235279 CDS NP_860335.1 32266303 1492493 complement(782664..783227) 1 NC_004917.1 predicted secreted protein; hypothetical protein 783227 1492493 HH0804 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860335.1 782664 R 235279 CDS NP_860336.1 32266304 1492494 complement(783232..784812) 1 NC_004917.1 similar to Campylobacter jejuni CJ0256; predicted membrane-associated; hypothetical protein 784812 1492494 HH0805 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860336.1 783232 R 235279 CDS NP_860337.1 32266305 1492495 complement(784814..786052) 1 NC_004917.1 gamma-glutamyl phosphate reductase 786052 proA 1492495 proA Helicobacter hepaticus ATCC 51449 gamma-glutamyl phosphate reductase NP_860337.1 784814 R 235279 CDS NP_860338.1 32266306 1492496 complement(786052..787116) 1 NC_004917.1 catalyzes the conversion of 2C-methyl-D-erythritol 2,4-cyclodiphosphate into 4-hydroxy-3-methyl-2-en-1-yl diphosphate; involved in isoprenoid synthesis; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 787116 ispG 1492496 ispG Helicobacter hepaticus ATCC 51449 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase NP_860338.1 786052 R 235279 CDS NP_860339.1 32266307 1492497 787130..787555 1 NC_004917.1 plays a role in hydrogenase nickel cofactor insertion; hydrogenase nickel incorporation protein 787555 hypA 1492497 hypA Helicobacter hepaticus ATCC 51449 hydrogenase nickel incorporation protein NP_860339.1 787130 D 235279 CDS NP_860340.1 32266308 1492498 787568..788023 1 NC_004917.1 hypothetical protein 788023 1492498 HH0809 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860340.1 787568 D 235279 CDS NP_860341.1 32266309 1492499 788039..789205 1 NC_004917.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; ipid-A-disaccharide synthase 789205 lpxB 1492499 lpxB Helicobacter hepaticus ATCC 51449 ipid-A-disaccharide synthase NP_860341.1 788039 D 235279 CDS NP_860342.1 32266310 1492500 789458..790855 1 NC_004917.1 similar to Helicobacter pylori HP0497; sodium-dependent transporter; hypothetical protein 790855 1492500 HH0811 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860342.1 789458 D 235279 CDS NP_860343.1 32266311 1492501 complement(790961..791629) 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 791629 1492501 HH0812 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860343.1 790961 R 235279 CDS NP_860344.1 32266312 1492502 complement(791998..792906) 1 NC_004917.1 hypothetical protein 792906 1492502 HH0813 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860344.1 791998 R 235279 CDS NP_860345.1 32266313 1492503 complement(792918..793781) 1 NC_004917.1 hypothetical protein 793781 1492503 HH0814 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860345.1 792918 R 235279 CDS NP_860346.1 32266314 1492504 complement(793718..794452) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 794452 1492504 HH0815 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860346.1 793718 R 235279 CDS NP_860347.1 32266315 1492505 complement(794553..795320) 1 NC_004917.1 similar to Helicobacter pylori JHP1437; predicted secreted protein; hypothetical protein 795320 1492505 HH0816 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860347.1 794553 R 235279 CDS NP_860348.1 32266316 1492506 complement(795321..796307) 1 NC_004917.1 similar to Helicobacter pylori HP0727; predicted transcriptional regulator; hypothetical protein 796307 1492506 HH0817 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860348.1 795321 R 235279 CDS NP_860349.1 32266317 1492507 complement(796308..797543) 1 NC_004917.1 carboxynorspermidine decarboxylase NspC 797543 nspC 1492507 nspC Helicobacter hepaticus ATCC 51449 carboxynorspermidine decarboxylase NspC NP_860349.1 796308 R 235279 CDS NP_860350.1 32266318 1492508 complement(797530..798495) 1 NC_004917.1 similar to Helicobacter pylori HP0019 (CheV1); chemotaxis signal transduction protein CheV 798495 1492508 HH0819 Helicobacter hepaticus ATCC 51449 chemotaxis signal transduction protein CheV NP_860350.1 797530 R 235279 CDS NP_860351.1 32266319 1492509 complement(798553..799275) 1 NC_004917.1 phosphatidylserine synthase PssA 799275 pssA 1492509 pssA Helicobacter hepaticus ATCC 51449 phosphatidylserine synthase PssA NP_860351.1 798553 R 235279 CDS NP_860352.1 32266320 1492510 complement(799265..799897) 1 NC_004917.1 similar to Helicobacter pylori JHP0354; predicted membrane-associated; hypothetical protein 799897 1492510 HH0821 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860352.1 799265 R 235279 CDS NP_860353.1 32266321 1492511 complement(799907..801742) 1 NC_004917.1 cell division protein FtsH; membrane bound zinc metallopeptidase 801742 ftsH_2 1492511 ftsH_2 Helicobacter hepaticus ATCC 51449 membrane bound zinc metallopeptidase NP_860353.1 799907 R 235279 CDS NP_860354.1 32266322 1492512 complement(801739..801858) 1 NC_004917.1 hypothetical protein 801858 1492512 HH0823 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860354.1 801739 R 235279 CDS NP_860355.1 32266323 1492513 complement(801831..802784) 1 NC_004917.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; ribosomal protein L11 methyltransferase 802784 prmA 1492513 prmA Helicobacter hepaticus ATCC 51449 ribosomal protein L11 methyltransferase NP_860355.1 801831 R 235279 CDS NP_860356.1 32266324 1492514 complement(802806..803183) 1 NC_004917.1 chemotaxis regulatory protein CheY 803183 cheY 1492514 cheY Helicobacter hepaticus ATCC 51449 chemotaxis regulatory protein CheY NP_860356.1 802806 R 235279 CDS NP_860357.1 32266325 1492515 complement(803271..804002) 1 NC_004917.1 catalyzes the formation of 5-(5-phospho-1-deoxyribulos-1-ylamino)methylideneamino-l- (5-phosphoribosyl)imidazole-4-carboxamide from 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 804002 hisA 1492515 hisA Helicobacter hepaticus ATCC 51449 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase NP_860357.1 803271 R 235279 CDS NP_860358.1 32266326 1492516 complement(804005..804859) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 804859 1492516 HH0827 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860358.1 804005 R 235279 CDS NP_860359.1 32266327 1492517 complement(804875..806041) 1 NC_004917.1 N-acetylmuramoyl-L-alanine amidase 806041 amiA 1492517 amiA Helicobacter hepaticus ATCC 51449 N-acetylmuramoyl-L-alanine amidase NP_860359.1 804875 R 235279 CDS NP_860360.1 32266328 1492518 complement(806050..807135) 1 NC_004917.1 similar to Helicobacter pylori HP0773; hypothetical protein 807135 1492518 HH0829 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860360.1 806050 R 235279 CDS NP_860361.1 32266329 1492519 complement(807146..808348) 1 NC_004917.1 catalyzes the formation of tyrosyl-tRNA(Tyr) from tyrosine and tRNA(Tyr); tyrosyl-tRNA synthetase 808348 tyrS 1492519 tyrS Helicobacter hepaticus ATCC 51449 tyrosyl-tRNA synthetase NP_860361.1 807146 R 235279 CDS NP_860362.1 32266330 1492520 complement(808361..810511) 1 NC_004917.1 similar to guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase; hypothetical protein 810511 spoT 1492520 spoT Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860362.1 808361 R 235279 CDS NP_860363.1 32266331 1492521 complement(810521..810745) 1 NC_004917.1 Promotes RNA polymerase assembly. Latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; DNA-directed RNA polymerase subunit omega 810745 rpoZ 1492521 rpoZ Helicobacter hepaticus ATCC 51449 DNA-directed RNA polymerase subunit omega NP_860363.1 810521 R 235279 CDS NP_860364.1 32266332 1492522 complement(810823..811533) 1 NC_004917.1 Catalyzes the phosphorylation of UMP to UDP; uridylate kinase 811533 pyrH 1492522 pyrH Helicobacter hepaticus ATCC 51449 uridylate kinase NP_860364.1 810823 R 235279 CDS NP_860365.1 32266333 1492523 complement(811673..812179) 1 NC_004917.1 predicted secreted protein; hypothetical protein 812179 1492523 HH0834 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860365.1 811673 R 235279 CDS NP_860366.1 32266334 1492524 complement(812262..812651) 1 NC_004917.1 predicted secreted protein; hypothetical protein 812651 1492524 HH0835 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860366.1 812262 R 235279 CDS NP_860367.1 32266335 1492525 complement(812680..814107) 1 NC_004917.1 similar to Campylobacter jejuni CJ1249; hypothetical protein 814107 1492525 HH0836 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860367.1 812680 R 235279 CDS NP_860368.1 32266336 1492526 complement(814150..814902) 1 NC_004917.1 similar to Helicobacter pylori HP1504; hypothetical protein 814902 1492526 HH0837 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860368.1 814150 R 235279 CDS NP_860369.1 32266337 1492527 complement(814890..815936) 1 NC_004917.1 riboflavin biosynthesis protein RibD 815936 ribD 1492527 ribD Helicobacter hepaticus ATCC 51449 riboflavin biosynthesis protein RibD NP_860369.1 814890 R 235279 CDS NP_860370.1 32266338 1492528 complement(815920..816393) 1 NC_004917.1 similar to Helicobacter pylori JHP0379; hypothetical protein 816393 1492528 HH0839 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860370.1 815920 R 235279 CDS NP_860371.1 32266339 1492529 complement(816404..816754) 1 NC_004917.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; ribosome-binding factor A 816754 rbfA 1492529 rbfA Helicobacter hepaticus ATCC 51449 ribosome-binding factor A NP_860371.1 816404 R 235279 CDS NP_860372.1 32266340 1492530 complement(816744..817889) 1 NC_004917.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); queuine tRNA-ribosyltransferase 817889 tgt 1492530 tgt Helicobacter hepaticus ATCC 51449 queuine tRNA-ribosyltransferase NP_860372.1 816744 R 235279 CDS NP_860373.1 32266341 1492531 complement(817903..818757) 1 NC_004917.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; pyrroline-5-carboxylate reductase 818757 proC 1492531 proC Helicobacter hepaticus ATCC 51449 pyrroline-5-carboxylate reductase NP_860373.1 817903 R 235279 CDS NP_860374.2 161546629 1492532 complement(818757..819197) 1 NC_004917.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 819197 1492532 HH0843 Helicobacter hepaticus ATCC 51449 flagellar assembly protein FliW NP_860374.2 818757 R 235279 CDS NP_860375.1 32266343 1492533 819333..819974 1 NC_004917.1 similar to Helicobacter pylori HP1378; predicted ComL-like lipoprotein; hypothetical protein 819974 comL 1492533 comL Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860375.1 819333 D 235279 CDS NP_860376.1 32266344 1492534 819983..822391 1 NC_004917.1 ATP-dependent protease LA 822391 lon 1492534 lon Helicobacter hepaticus ATCC 51449 ATP-dependent protease LA NP_860376.1 819983 D 235279 CDS NP_860377.1 32266345 1492535 complement(822435..823631) 1 NC_004917.1 hypothetical protein 823631 1492535 HH0846 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860377.1 822435 R 235279 CDS NP_860378.1 32266346 1492536 complement(823779..825152) 1 NC_004917.1 hypothetical protein 825152 1492536 HH0847 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860378.1 823779 R 235279 CDS NP_860379.1 32266347 1492537 complement(825286..825402) 1 NC_004917.1 predicted secreted protein; hypothetical protein 825402 1492537 HH0848 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860379.1 825286 R 235279 CDS NP_860380.1 32266348 1492538 825490..826392 1 NC_004917.1 cysteine synthase 826392 cysK_2 1492538 cysK_2 Helicobacter hepaticus ATCC 51449 cysteine synthase NP_860380.1 825490 D 235279 CDS NP_860381.1 32266349 1492539 complement(826490..828208) 1 NC_004917.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; dihydroxy-acid dehydratase 828208 1492539 HH0850 Helicobacter hepaticus ATCC 51449 dihydroxy-acid dehydratase NP_860381.1 826490 R 235279 CDS NP_860382.1 32266350 1492540 complement(828289..829194) 1 NC_004917.1 possible 5,10-methylenetetrahydrofolate reductase; hypothetical protein 829194 metF 1492540 metF Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860382.1 828289 R 235279 CDS NP_860383.1 32266351 1492541 complement(829230..831506) 1 NC_004917.1 catalyzes the transfer of a methyl group from 5-methyltetrahydrofolate to homocysteine to form methionine; 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase 831506 metE 1492541 metE Helicobacter hepaticus ATCC 51449 5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase NP_860383.1 829230 R 235279 CDS NP_860384.1 32266352 1492542 complement(831724..832581) 1 NC_004917.1 phospholipase A 832581 pldA 1492542 pldA Helicobacter hepaticus ATCC 51449 phospholipase A NP_860384.1 831724 R 235279 CDS NP_860385.1 32266353 1492543 832635..834488 1 NC_004917.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; glucosamine--fructose-6-phosphate aminotransferase 834488 glmS 1492543 glmS Helicobacter hepaticus ATCC 51449 glucosamine--fructose-6-phosphate aminotransferase NP_860385.1 832635 D 235279 CDS NP_860386.1 32266354 1492544 complement(834475..834894) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 834894 1492544 HH0855 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860386.1 834475 R 235279 CDS NP_860387.1 32266355 1492545 complement(834934..835836) 1 NC_004917.1 similar to phage lambda cII repressor protease; membrane protease subunits 835836 1492545 HH0856 Helicobacter hepaticus ATCC 51449 membrane protease subunits NP_860387.1 834934 R 235279 CDS NP_860388.1 32266356 1492546 836061..837422 1 NC_004917.1 hypothetical protein 837422 1492546 HH0857 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860388.1 836061 D 235279 CDS NP_860389.1 32266357 1492547 837433..837561 1 NC_004917.1 hypothetical protein 837561 1492547 HH0858 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860389.1 837433 D 235279 CDS NP_860390.1 32266358 1492548 complement(837573..840251) 1 NC_004917.1 Catalyzes a two-step reaction, first charging an alanyl molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; alanyl-tRNA synthetase 840251 alaS 1492548 alaS Helicobacter hepaticus ATCC 51449 alanyl-tRNA synthetase NP_860390.1 837573 R 235279 CDS NP_860391.1 32266359 1492549 complement(840303..840731) 1 NC_004917.1 similar to Helicobacter pylori HP1580; predicted membrane-associated; hypothetical protein 840731 1492549 HH0860 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860391.1 840303 R 235279 CDS NP_860392.1 32266360 1492550 complement(840968..841894) 1 NC_004917.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); 4-hydroxythreonine-4-phosphate dehydrogenase 841894 pdxA 1492550 pdxA Helicobacter hepaticus ATCC 51449 4-hydroxythreonine-4-phosphate dehydrogenase NP_860392.1 840968 R 235279 CDS NP_860393.1 32266361 1492551 complement(841882..842685) 1 NC_004917.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); pyridoxine 5'-phosphate synthase 842685 pdxJ 1492551 pdxJ Helicobacter hepaticus ATCC 51449 pyridoxine 5'-phosphate synthase NP_860393.1 841882 R 235279 CDS NP_860394.1 32266362 1492552 complement(842696..843178) 1 NC_004917.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; acetolactate synthase 3 regulatory subunit 843178 ilvH 1492552 ilvH Helicobacter hepaticus ATCC 51449 acetolactate synthase 3 regulatory subunit NP_860394.1 842696 R 235279 CDS NP_860395.1 32266363 1492553 complement(843180..844892) 1 NC_004917.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine resistant; also known as acetolactate synthase 3 large subunit; acetolactate synthase 3 catalytic subunit 844892 ilvI 1492553 ilvI Helicobacter hepaticus ATCC 51449 acetolactate synthase 3 catalytic subunit NP_860395.1 843180 R 235279 CDS NP_860396.1 32266364 1492554 845046..846215 1 NC_004917.1 similar to Campylobacter jejuni predicted transport transmembrane protein CJ1040c; hypothetical protein 846215 1492554 HH0865 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860396.1 845046 D 235279 CDS NP_860397.1 32266365 1492555 846277..846672 1 NC_004917.1 similar to Campylobacter jejuni CJ202c; predicted secreted protein; hypothetical protein 846672 1492555 HH0866 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860397.1 846277 D 235279 CDS NP_860398.1 32266366 1492556 846644..846814 1 NC_004917.1 predicted membrane-associated; hypothetical protein 846814 1492556 HH0867 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860398.1 846644 D 235279 CDS NP_860399.1 32266367 1492557 846898..847104 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein CJ0201c; hypothetical protein 847104 1492557 HH0868 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860399.1 846898 D 235279 CDS NP_860400.1 32266368 1492558 complement(847274..848674) 1 NC_004917.1 subunit D; glycolate oxidase 848674 glcD 1492558 glcD Helicobacter hepaticus ATCC 51449 glycolate oxidase NP_860400.1 847274 R 235279 CDS NP_860401.1 32266369 1492559 complement(848677..849423) 1 NC_004917.1 similar to Campylobacter jejuni CJ1214c; predicted secreted protein; hypothetical protein 849423 1492559 HH0870 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860401.1 848677 R 235279 CDS NP_860402.1 32266370 1492560 complement(849434..850096) 1 NC_004917.1 similar to Helicobacter pylori HP0507; hypothetical protein 850096 1492560 HH0871 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860402.1 849434 R 235279 CDS NP_860403.1 32266371 1492561 complement(850086..851285) 1 NC_004917.1 similar to Helicobacter pylori HP0506; predicted secreted protein; hypothetical protein 851285 1492561 HH0872 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860403.1 850086 R 235279 CDS NP_860404.1 32266372 1492562 851450..851638 1 NC_004917.1 predicted membrane-associated; hypothetical protein 851638 1492562 HH0873 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860404.1 851450 D 235279 CDS NP_860405.1 32266373 1492563 851729..851941 1 NC_004917.1 flagellar anti FliA (sigma 28) factor FlgM 851941 flgM 1492563 flgM Helicobacter hepaticus ATCC 51449 flagellar anti FliA (sigma 28) factor FlgM NP_860405.1 851729 D 235279 CDS NP_860406.1 32266374 1492564 852006..852431 1 NC_004917.1 similar to Helicobacter pylori JHP1048; hypothetical protein 852431 1492564 HH0875 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860406.1 852006 D 235279 CDS NP_860407.1 32266375 1492565 852440..854260 1 NC_004917.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgK 854260 flgK 1492565 flgK Helicobacter hepaticus ATCC 51449 flagellar hook-associated protein FlgK NP_860407.1 852440 D 235279 CDS NP_860408.1 32266376 1492566 854244..854972 1 NC_004917.1 similar to Helicobacter pylori HP0174; predicted membrane-associated; hypothetical protein 854972 1492566 HH0877 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860408.1 854244 D 235279 CDS NP_860409.1 32266377 1492567 complement(855054..855431) 1 NC_004917.1 hypothetical protein 855431 1492567 HH0878 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860409.1 855054 R 235279 CDS NP_860410.1 32266378 1492568 complement(855412..857100) 1 NC_004917.1 cell division protein FtsH; ATP-dependent zinc metalloproteinase 857100 ftsH_1 1492568 ftsH_1 Helicobacter hepaticus ATCC 51449 ATP-dependent zinc metalloproteinase NP_860410.1 855412 R 235279 CDS NP_860411.1 32266379 1492569 complement(857087..858358) 1 NC_004917.1 similar to Helicobacter pylori HP0285; hypothetical protein 858358 1492569 HH0880 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860411.1 857087 R 235279 CDS NP_860412.1 32266380 1492570 complement(858370..859992) 1 NC_004917.1 similar to Helicobacter pylori HP0284; predicted membrane-associated; hypothetical protein 859992 1492570 HH0881 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860412.1 858370 R 235279 CDS NP_860413.1 32266381 1492571 complement(859989..861050) 1 NC_004917.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; 3-dehydroquinate synthase 861050 aroB 1492571 aroB Helicobacter hepaticus ATCC 51449 3-dehydroquinate synthase NP_860413.1 859989 R 235279 CDS NP_860414.1 32266382 1492572 complement(861059..862492) 1 NC_004917.1 similar to Helicobacter pylori HP0282; hypothetical protein 862492 1492572 HH0883 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860414.1 861059 R 235279 CDS NP_860415.1 32266383 1492573 complement(862557..863240) 1 NC_004917.1 similar to Helicobacter pylori HP0778; hypothetical protein 863240 1492573 HH0884 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860415.1 862557 R 235279 CDS NP_860416.1 32266384 1492574 complement(863249..863506) 1 NC_004917.1 similar to Helicobacter pylori HP0495; hypothetical protein 863506 1492574 HH0885 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860416.1 863249 R 235279 CDS NP_860417.1 32266385 1492575 complement(863510..863926) 1 NC_004917.1 similar to Helicobacter pylori HP0496; hypothetical protein 863926 1492575 HH0886 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860417.1 863510 R 235279 CDS NP_860418.1 32266386 1492576 864254..865507 1 NC_004917.1 similar to Helicobacter pylori sodium- and chloride-dependent transporter; hypothetical protein 865507 1492576 HH0887 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860418.1 864254 D 235279 CDS NP_860419.1 32266387 1492577 complement(865512..866648) 1 NC_004917.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; carbamoyl phosphate synthase small subunit 866648 carA 1492577 carA Helicobacter hepaticus ATCC 51449 carbamoyl phosphate synthase small subunit NP_860419.1 865512 R 235279 CDS NP_860420.1 32266388 1492578 complement(866645..867196) 1 NC_004917.1 similar to Helicobacter pylori JHP1157; hypothetical protein 867196 1492578 HH0889 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860420.1 866645 R 235279 CDS NP_860421.1 32266389 1492579 complement(867266..869275) 1 NC_004917.1 penicillin-binding protein 869275 pbpA 1492579 pbpA Helicobacter hepaticus ATCC 51449 penicillin-binding protein NP_860421.1 867266 R 235279 CDS NP_860422.1 32266390 1492580 complement(869283..870689) 1 NC_004917.1 similar to Helicobacter pylori JHP0546; predicted methyl-accepting chemotaxis protein (MCP); hypothetical protein 870689 1492580 HH0891 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860422.1 869283 R 235279 CDS NP_860423.1 32266391 1492581 complement(870761..870859) 1 NC_004917.1 hypothetical protein 870859 1492581 HH0892 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860423.1 870761 R 235279 CDS NP_860424.1 32266392 1492582 870931..871392 1 NC_004917.1 ferric uptake regulation protein 871392 fur 1492582 fur Helicobacter hepaticus ATCC 51449 ferric uptake regulation protein NP_860424.1 870931 D 235279 CDS NP_860425.1 32266393 1492583 complement(871570..872250) 1 NC_004917.1 hypothetical protein 872250 1492583 HH0894 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860425.1 871570 R 235279 CDS NP_860426.1 32266394 1492584 complement(872253..873557) 1 NC_004917.1 similar to Helicobacter pylori conserved hypothetical integral membrane protein; hypothetical protein 873557 1492584 HH0895 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860426.1 872253 R 235279 CDS NP_860427.1 32266395 1492585 complement(873567..874793) 1 NC_004917.1 catalyzes the formation of 2-oxobutanoate from L-threonine; threonine dehydratase 874793 cysK 1492585 cysK Helicobacter hepaticus ATCC 51449 threonine dehydratase NP_860427.1 873567 R 235279 CDS NP_860428.1 32266396 1492586 complement(874793..875782) 1 NC_004917.1 similar to Helicobacter pylori HP1234; predicted membrane-associated; hypothetical protein 875782 1492586 HH0897 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860428.1 874793 R 235279 CDS NP_860429.1 32266397 1492587 complement(875779..875874) 1 NC_004917.1 hypothetical protein 875874 1492587 HH0898 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860429.1 875779 R 235279 CDS NP_860430.1 32266398 1492588 875956..876690 1 NC_004917.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; flagellar basal body L-ring protein 876690 flgH 1492588 flgH Helicobacter hepaticus ATCC 51449 flagellar basal body L-ring protein NP_860430.1 875956 D 235279 CDS NP_860431.1 32266399 1492589 876702..877409 1 NC_004917.1 acylneuraminate cytidylyltransferase 877409 neuA 1492589 neuA Helicobacter hepaticus ATCC 51449 acylneuraminate cytidylyltransferase NP_860431.1 876702 D 235279 CDS NP_860432.1 32266400 1492590 complement(877412..877660) 1 NC_004917.1 similar to Campylobacter jejuni CJ0761; hypothetical protein 877660 1492590 HH0901 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860432.1 877412 R 235279 CDS NP_860433.1 32266401 1492591 complement(877648..877845) 1 NC_004917.1 hypothetical protein 877845 1492591 HH0902 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860433.1 877648 R 235279 CDS NP_860434.1 32266402 1492592 complement(877863..879089) 1 NC_004917.1 predicted secreted protein; hypothetical protein 879089 1492592 HH0903 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860434.1 877863 R 235279 CDS NP_860435.1 32266403 1492593 complement(879109..879285) 1 NC_004917.1 hypothetical protein 879285 1492593 HH0904 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860435.1 879109 R 235279 CDS NP_860436.1 32266404 1492594 complement(879333..879662) 1 NC_004917.1 hypothetical protein 879662 1492594 HH0905 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860436.1 879333 R 235279 CDS NP_860437.1 32266405 1492595 879791..880048 1 NC_004917.1 hypothetical protein 880048 1492595 HH0906 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860437.1 879791 D 235279 CDS NP_860438.1 32266406 1492596 880147..881694 1 NC_004917.1 flagellar modification protein; hypothetical protein 881694 1492596 HH0907 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860438.1 880147 D 235279 CDS NP_860439.1 32266407 1492597 881691..882740 1 NC_004917.1 sialic acid synthase 882740 1492597 HH0908 Helicobacter hepaticus ATCC 51449 sialic acid synthase NP_860439.1 881691 D 235279 CDS NP_860440.1 32266408 1492598 882806..883921 1 NC_004917.1 possible aminotransferase; hypothetical protein 883921 1492598 HH0909 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860440.1 882806 D 235279 CDS NP_860441.1 32266409 1492599 883938..884846 1 NC_004917.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; tRNA delta(2)-isopentenylpyrophosphate transferase 884846 miaA 1492599 miaA Helicobacter hepaticus ATCC 51449 tRNA delta(2)-isopentenylpyrophosphate transferase NP_860441.1 883938 D 235279 CDS NP_860442.1 32266410 1492600 complement(884847..885248) 1 NC_004917.1 hypothetical protein 885248 1492600 HH0911 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860442.1 884847 R 235279 CDS NP_860443.1 32266411 1492601 complement(885259..885951) 1 NC_004917.1 similar to Helicobacter pylori HP0920; predicted membrane-associated; hypothetical protein 885951 1492601 HH0912 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860443.1 885259 R 235279 CDS NP_860444.1 32266412 1492602 complement(886069..887445) 1 NC_004917.1 possible ferredoxin-like protein; predicted membrane-associated; hypothetical protein 887445 1492602 HH0913 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860444.1 886069 R 235279 CDS NP_860445.1 32266413 1492603 887587..889197 1 NC_004917.1 ATP-binding protein; ABC transport system 889197 1492603 HH0914 Helicobacter hepaticus ATCC 51449 ABC transport system NP_860445.1 887587 D 235279 CDS NP_860446.1 32266414 1492604 complement(889349..889552) 1 NC_004917.1 hypothetical protein 889552 1492604 HH0915 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860446.1 889349 R 235279 CDS NP_860447.1 32266415 1492605 complement(889539..889829) 1 NC_004917.1 predicted secreted protein; hypothetical protein 889829 1492605 HH0916 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860447.1 889539 R 235279 CDS NP_860448.1 32266416 1492606 complement(889910..890683) 1 NC_004917.1 hypothetical protein 890683 1492606 HH0917 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860448.1 889910 R 235279 CDS NP_860449.1 32266417 1492607 890890..891300 1 NC_004917.1 hypothetical protein 891300 1492607 HH0918 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860449.1 890890 D 235279 CDS NP_860450.1 32266418 1492608 complement(891878..892390) 1 NC_004917.1 similar to Helicobacter pylori HP0952; CinA/YgaD-like; hypothetical protein 892390 1492608 HH0919 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860450.1 891878 R 235279 CDS NP_860451.1 32266419 1492609 892487..893566 1 NC_004917.1 similar to Campylobacter jejuni CJ0604; hypothetical protein 893566 1492609 HH0920 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860451.1 892487 D 235279 CDS NP_860452.1 32266420 1492610 893662..894405 1 NC_004917.1 carbonic anhydrase 894405 1492610 HH0921 Helicobacter hepaticus ATCC 51449 carbonic anhydrase NP_860452.1 893662 D 235279 CDS NP_860453.1 32266421 1492611 894455..894784 1 NC_004917.1 hypothetical protein 894784 1492611 HH0922 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860453.1 894455 D 235279 CDS NP_860454.1 32266422 1492612 894824..895498 1 NC_004917.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; glycerol-3-phosphate acyltransferase PlsY 895498 1492612 HH0923 Helicobacter hepaticus ATCC 51449 glycerol-3-phosphate acyltransferase PlsY NP_860454.1 894824 D 235279 CDS NP_860455.1 32266423 1492613 895498..895833 1 NC_004917.1 similar to Helicobacter pylori JHP1403; predicted dihydroneopterin aldolase; hypothetical protein 895833 1492613 HH0924 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860455.1 895498 D 235279 CDS NP_860456.1 32266424 1492614 complement(895838..896812) 1 NC_004917.1 hypothetical protein 896812 1492614 HH0925 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860456.1 895838 R 235279 CDS NP_860457.1 32266425 1492615 complement(896888..898282) 1 NC_004917.1 Charges one glutamine molecule and pairs it to its corresponding RNA trinucleotide during protein translation; glutamyl-tRNA synthetase 898282 gltX 1492615 gltX Helicobacter hepaticus ATCC 51449 glutamyl-tRNA synthetase NP_860457.1 896888 R 235279 CDS NP_860458.1 32266426 1492616 898426..899478 1 NC_004917.1 UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 899478 murG 1492616 murG Helicobacter hepaticus ATCC 51449 undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase NP_860458.1 898426 D 235279 CDS NP_860459.1 32266427 1492617 899641..900399 1 NC_004917.1 exodeoxyribonuclease LexA 900399 lexA 1492617 lexA Helicobacter hepaticus ATCC 51449 exodeoxyribonuclease LexA NP_860459.1 899641 D 235279 CDS NP_860460.1 32266428 1492618 900423..901052 1 NC_004917.1 possible uracil-DNA glycosylase; hypothetical protein 901052 1492618 HH0929 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860460.1 900423 D 235279 CDS NP_860461.1 32266429 1492619 902671..903975 1 NC_004917.1 similar to Helicobacter pylori HP0275; predicted secreted protein; hypothetical protein 903975 1492619 HH0930 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860461.1 902671 D 235279 CDS NP_860462.1 32266430 1492620 complement(903972..906002) 1 NC_004917.1 ATP-dependent DNA helicase 906002 rep 1492620 rep Helicobacter hepaticus ATCC 51449 ATP-dependent DNA helicase NP_860462.1 903972 R 235279 CDS NP_860463.1 32266431 1492621 complement(906013..906432) 1 NC_004917.1 binds to flagellin and appears to stabilize flagellin during flagella assembly; flagellar assembly protein FliW 906432 1492621 HH0932 Helicobacter hepaticus ATCC 51449 flagellar assembly protein FliW NP_860463.1 906013 R 235279 CDS NP_860464.1 32266432 1492622 906508..909207 1 NC_004917.1 valine--tRNA ligase; ValRS; converts valine ATP and tRNA(Val) to AMP PPi and valyl-tRNA(Val); class-I aminoacyl-tRNA synthetase type 1 subfamily; has a posttransfer editing process to hydrolyze mischarged Thr-tRNA(Val) which is done by the editing domain; valyl-tRNA synthetase 909207 valS 1492622 valS Helicobacter hepaticus ATCC 51449 valyl-tRNA synthetase NP_860464.1 906508 D 235279 CDS NP_860465.1 32266433 1492623 909813..910949 1 NC_004917.1 similar to Campylobacter jejuni CJ0760; hypothetical protein 910949 1492623 HH0934 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860465.1 909813 D 235279 CDS NP_860466.1 32266434 1492624 complement(910958..911314) 1 NC_004917.1 this protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site; 50S ribosomal protein L19 911314 rplS 1492624 rplS Helicobacter hepaticus ATCC 51449 50S ribosomal protein L19 NP_860466.1 910958 R 235279 CDS NP_860467.1 32266435 1492625 complement(911311..912036) 1 NC_004917.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; tRNA (guanine-N(1)-)-methyltransferase 912036 trmD 1492625 trmD Helicobacter hepaticus ATCC 51449 tRNA (guanine-N(1)-)-methyltransferase NP_860467.1 911311 R 235279 CDS NP_860468.1 32266436 1492626 complement(912033..912494) 1 NC_004917.1 hypothetical protein 912494 1492626 HH0937 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860468.1 912033 R 235279 CDS NP_860469.1 32266437 1492627 complement(912581..912820) 1 NC_004917.1 similar to Campylobacter jejuni CJ0711; hypothetical protein 912820 1492627 HH0938 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860469.1 912581 R 235279 CDS NP_860470.1 32266438 1492628 complement(912836..913069) 1 NC_004917.1 binds to lower part of 30S body where it stabilizes two domains; required for efficient assembly of 30S; in Escherichia coli this protein has nuclease activity; 30S ribosomal protein S16 913069 rpsP 1492628 rpsP Helicobacter hepaticus ATCC 51449 30S ribosomal protein S16 NP_860470.1 912836 R 235279 CDS NP_860471.1 32266439 1492629 complement(913144..914487) 1 NC_004917.1 signal recognition particle protein 914487 ffh 1492629 ffh Helicobacter hepaticus ATCC 51449 signal recognition particle protein NP_860471.1 913144 R 235279 CDS NP_860472.1 32266440 1492630 914523..914633 1 NC_004917.1 predicted membrane-associated; hypothetical protein 914633 1492630 HH0941 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860472.1 914523 D 235279 CDS NP_860473.1 32266441 1492631 914630..915040 1 NC_004917.1 FurR family; transcriptional regulator 915040 1492631 HH0942 Helicobacter hepaticus ATCC 51449 transcriptional regulator NP_860473.1 914630 D 235279 CDS NP_860474.1 32266442 1492632 complement(915045..917090) 1 NC_004917.1 similar to Helicobacter pylori JHP0417; hypothetical protein 917090 1492632 HH0943 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860474.1 915045 R 235279 CDS NP_860475.1 32266443 1492633 complement(917096..918154) 1 NC_004917.1 possible peptidase; hypothetical protein 918154 1492633 HH0944 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860475.1 917096 R 235279 CDS NP_860476.1 32266444 1492634 complement(918155..918631) 1 NC_004917.1 catalyzes the formation of 3-dehydroshikimate from 3-dehydroquinate in chorismate biosynthesis; 3-dehydroquinate dehydratase 918631 1492634 HH0945 Helicobacter hepaticus ATCC 51449 3-dehydroquinate dehydratase NP_860476.1 918155 R 235279 CDS NP_860477.1 32266445 1492635 complement(918751..920421) 1 NC_004917.1 hypothetical protein 920421 1492635 HH0946 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860477.1 918751 R 235279 CDS NP_860478.1 32266446 1492636 complement(920427..921578) 1 NC_004917.1 similar to Helicobacter pylori JHP0703; predicted membrane-associated; hypothetical protein 921578 1492636 HH0947 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860478.1 920427 R 235279 CDS NP_860479.1 32266447 1492637 complement(921637..921912) 1 NC_004917.1 similar to Helicobacter pylori HP0764; hypothetical protein 921912 1492637 HH0948 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860479.1 921637 R 235279 CDS NP_860480.1 32266448 1492638 922013..922258 1 NC_004917.1 hypothetical protein 922258 1492638 HH0949 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860480.1 922013 D 235279 CDS NP_860481.1 32266449 1492639 complement(922405..924891) 1 NC_004917.1 biotin sulfoxide reductase BisC 924891 bisC 1492639 bisC Helicobacter hepaticus ATCC 51449 biotin sulfoxide reductase BisC NP_860481.1 922405 R 235279 CDS NP_860482.1 32266450 1492640 complement(924891..925484) 1 NC_004917.1 similar to Campylobacter jejuni CJ0265c; predicted cytochrome c-type protein; hypothetical protein 925484 1492640 HH0951 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860482.1 924891 R 235279 CDS NP_860483.1 32266451 1492641 complement(925592..926404) 1 NC_004917.1 similar to Helicobacter pylori HP0257; predicted secreted protein; hypothetical protein 926404 1492641 HH0952 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860483.1 925592 R 235279 CDS NP_860484.1 32266452 1492642 complement(926401..926829) 1 NC_004917.1 similar to Caulobacter crescentus FliJ; similar to Helicobacter pylori HP0256; hypothetical protein 926829 1492642 HH0953 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860484.1 926401 R 235279 CDS NP_860485.1 32266453 1492643 complement(926836..928083) 1 NC_004917.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; adenylosuccinate synthetase 928083 purA 1492643 purA Helicobacter hepaticus ATCC 51449 adenylosuccinate synthetase NP_860485.1 926836 R 235279 CDS NP_860486.1 32266454 1492644 complement(928113..928955) 1 NC_004917.1 May allow the feedback regulation of ATP phosphoribosyltransferase activity by histidine; ATP phosphoribosyltransferase 928955 hisZ 1492644 hisZ Helicobacter hepaticus ATCC 51449 ATP phosphoribosyltransferase NP_860486.1 928113 R 235279 CDS NP_860487.1 32266455 1492645 929079..930116 1 NC_004917.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; tRNA-specific 2-thiouridylase MnmA 930116 mnmA 1492645 mnmA Helicobacter hepaticus ATCC 51449 tRNA-specific 2-thiouridylase MnmA NP_860487.1 929079 D 235279 CDS NP_860488.1 32266456 1492646 930235..930624 1 NC_004917.1 similar to Helicobacter pylori replication protein A; hypothetical protein 930624 1492646 HH0957 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860488.1 930235 D 235279 CDS NP_860489.1 32266457 1492647 complement(930633..930779) 1 NC_004917.1 hypothetical protein 930779 1492647 HH0958 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860489.1 930633 R 235279 CDS NP_860490.1 32266458 1492648 930886..931284 1 NC_004917.1 hypothetical protein 931284 1492648 HH0959 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860490.1 930886 D 235279 CDS NP_860491.1 32266459 1492649 931337..931993 1 NC_004917.1 predicted membrane-associated; hypothetical protein 931993 1492649 HH0960 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860491.1 931337 D 235279 CDS NP_860492.1 32266460 1492650 932075..932242 1 NC_004917.1 predicted secreted protein; hypothetical protein 932242 1492650 HH0961 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860492.1 932075 D 235279 CDS NP_860493.1 32266461 1492651 complement(933061..933525) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 933525 1492651 HH0962 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860493.1 933061 R 235279 CDS NP_860494.1 32266462 1492652 complement(933509..933943) 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein; predicted membrane-associated; hypothetical protein 933943 1492652 HH0963 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860494.1 933509 R 235279 CDS NP_860495.1 32266463 1492653 complement(933946..935253) 1 NC_004917.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; glutamate-1-semialdehyde aminotransferase 935253 hemL 1492653 hemL Helicobacter hepaticus ATCC 51449 glutamate-1-semialdehyde aminotransferase NP_860495.1 933946 R 235279 CDS NP_860496.1 32266464 1492654 935277..935369 1 NC_004917.1 predicted secreted protein; hypothetical protein 935369 1492654 HH0965 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860496.1 935277 D 235279 CDS NP_860497.1 32266465 1492655 935462..936022 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 936022 1492655 HH0966 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860497.1 935462 D 235279 CDS NP_860498.1 32266466 1492656 936181..937902 1 NC_004917.1 hypothetical protein 937902 1492656 HH0967 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860498.1 936181 D 235279 CDS NP_860499.1 32266467 1492657 complement(938005..938538) 1 NC_004917.1 hypothetical protein 938538 1492657 HH0968 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860499.1 938005 R 235279 CDS NP_860500.1 32266468 1492658 938727..939926 1 NC_004917.1 catalyzes the formation of N-acetyl-l-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine; acetylornithine aminotransferase 939926 argD 1492658 argD Helicobacter hepaticus ATCC 51449 acetylornithine aminotransferase NP_860500.1 938727 D 235279 CDS NP_860501.1 32266469 1492659 939907..941004 1 NC_004917.1 similar to Helicobacter pylori HP0812; hypothetical protein 941004 1492659 HH0970 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860501.1 939907 D 235279 CDS NP_860502.1 32266470 1492660 941085..943076 1 NC_004917.1 similar to Campylobacter jejuni methyl-accepting chemotaxis signal transduction protein; hypothetical protein 943076 1492660 HH0971 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860502.1 941085 D 235279 CDS NP_860503.1 32266471 1492661 complement(943104..944147) 1 NC_004917.1 hypothetical protein 944147 1492661 HH0972 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860503.1 943104 R 235279 CDS NP_860504.1 32266472 1492662 complement(944229..945089) 1 NC_004917.1 similar to Campylobacter jejuni CJ20248; hypothetical protein 945089 1492662 HH0973 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860504.1 944229 R 235279 CDS NP_860505.1 32266473 1492663 complement(945230..946540) 1 NC_004917.1 similar to Helicobacter pylori JHP0611; predicted glycerol-3-phosphate dehydrogenase GlpC; hypothetical protein 946540 1492663 HH0974 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860505.1 945230 R 235279 CDS NP_860506.1 32266474 1492664 complement(946550..947938) 1 NC_004917.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; coproporphyrinogen III oxidase 947938 hemN_1 1492664 hemN_1 Helicobacter hepaticus ATCC 51449 coproporphyrinogen III oxidase NP_860506.1 946550 R 235279 CDS NP_860507.1 32266475 1492665 complement(947953..948384) 1 NC_004917.1 similar to Helicobacter pylori HP0664; hypothetical protein 948384 1492665 HH0976 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860507.1 947953 R 235279 CDS NP_860508.1 32266476 1492666 complement(948388..949377) 1 NC_004917.1 ornithine carbamoyltransferase 949377 argF 1492666 argF Helicobacter hepaticus ATCC 51449 ornithine carbamoyltransferase NP_860508.1 948388 R 235279 CDS NP_860509.1 32266477 1492667 complement(949453..950025) 1 NC_004917.1 similar to Helicobacter pylori HP0838; predicted secreted protein; hypothetical protein 950025 1492667 HH0978 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860509.1 949453 R 235279 CDS NP_860510.1 32266478 1492668 complement(950049..950747) 1 NC_004917.1 similar to Campylobacter jejuni lipoprotein; hypothetical protein 950747 1492668 HH0979 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860510.1 950049 R 235279 CDS NP_860511.1 32266479 1492669 complement(951092..951847) 1 NC_004917.1 predicted glycosyl transferase; hypothetical protein 951847 1492669 HH0980 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860511.1 951092 R 235279 CDS NP_860512.1 32266480 1492670 complement(951837..952838) 1 NC_004917.1 glucosyl transferase; hypothetical protein 952838 1492670 HH0981 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860512.1 951837 R 235279 CDS NP_860513.1 32266481 1492671 complement(958823..959767) 1 NC_004917.1 acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; essential for survival; plays a role in cell responses to environmental changes; lipid A biosynthesis lauroyl acyltransferase 959767 1492671 HH0982 Helicobacter hepaticus ATCC 51449 lipid A biosynthesis lauroyl acyltransferase NP_860513.1 958823 R 235279 CDS NP_860514.1 32266482 1492672 complement(959767..960861) 1 NC_004917.1 lipopolysaccharide heptosyltransferase 960861 1492672 HH0983 Helicobacter hepaticus ATCC 51449 lipopolysaccharide heptosyltransferase NP_860514.1 959767 R 235279 CDS NP_860515.1 32266483 1492673 complement(960885..962357) 1 NC_004917.1 exopolyphosphatase 962357 ppx 1492673 ppx Helicobacter hepaticus ATCC 51449 exopolyphosphatase NP_860515.1 960885 R 235279 CDS NP_860516.1 32266484 1492674 complement(962357..962608) 1 NC_004917.1 ferredoxin 962608 fdxB 1492674 fdxB Helicobacter hepaticus ATCC 51449 ferredoxin NP_860516.1 962357 R 235279 CDS NP_860517.1 32266485 1492675 complement(962680..963330) 1 NC_004917.1 hypothetical protein 963330 1492675 HH0986 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860517.1 962680 R 235279 CDS NP_860518.1 32266486 1492676 complement(963348..963455) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 963455 1492676 HH0987 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860518.1 963348 R 235279 CDS NP_860519.1 32266487 1492677 complement(963965..964069) 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 964069 1492677 HH0988 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860519.1 963965 R 235279 CDS NP_860520.1 32266488 1492678 964113..965051 1 NC_004917.1 similar to Campylobacter jejuni CJ504c; hypothetical protein 965051 1492678 HH0989 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860520.1 964113 D 235279 CDS NP_860521.1 32266489 1492679 complement(965008..966270) 1 NC_004917.1 similar to Helicobacter pylori JHP0602; predicted protease; hypothetical protein 966270 1492679 HH0990 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860521.1 965008 R 235279 CDS NP_860522.1 32266490 1492680 complement(966321..967421) 1 NC_004917.1 similar to Helicobacter pylori JHP0601; hypothetical protein 967421 1492680 HH0991 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860522.1 966321 R 235279 CDS NP_860523.1 32266491 1492681 complement(967445..969682) 1 NC_004917.1 hypothetical protein 969682 1492681 HH0992 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860523.1 967445 R 235279 CDS NP_860524.1 32266492 1492682 complement(969751..970599) 1 NC_004917.1 catalyzes the formation of 4-hydroxyphenylpyruvate from prephenate; prephenate dehydrogenase 970599 tyrA 1492682 tyrA Helicobacter hepaticus ATCC 51449 prephenate dehydrogenase NP_860524.1 969751 R 235279 CDS NP_860525.1 32266493 1492683 complement(970627..971337) 1 NC_004917.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; 16S ribosomal RNA methyltransferase RsmE 971337 1492683 HH0994 Helicobacter hepaticus ATCC 51449 16S ribosomal RNA methyltransferase RsmE NP_860525.1 970627 R 235279 CDS NP_860526.1 32266494 1492684 complement(971338..971766) 1 NC_004917.1 similar to Helicobacter pylori HP0375; predicted membrane-associated; hypothetical protein 971766 1492684 HH0995 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860526.1 971338 R 235279 CDS NP_860527.1 32266495 1492685 971883..972818 1 NC_004917.1 protoheme ferro-lyase; catalyzes the insertion of a ferrous ion into protoporphyrin IX to form protoheme; involved in protoheme biosynthesis; in some organisms this protein is membrane-associated while in others it is cytosolic; ferrochelatase 972818 hemH 1492685 hemH Helicobacter hepaticus ATCC 51449 ferrochelatase NP_860527.1 971883 D 235279 CDS NP_860528.1 32266496 1492686 972844..973464 1 NC_004917.1 similar to Helicobacter pylori HP0377; predicted membrane-associated; hypothetical protein 973464 1492686 HH0997 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860528.1 972844 D 235279 CDS NP_860529.1 32266497 1492687 973476..976286 1 NC_004917.1 cytochrome c biogenesis protein 976286 1492687 HH0998 Helicobacter hepaticus ATCC 51449 cytochrome c biogenesis protein NP_860529.1 973476 D 235279 CDS NP_860530.1 32266498 1492688 976341..978386 1 NC_004917.1 predicted secreted protein; hypothetical protein 978386 1492688 HH0999 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860530.1 976341 D 235279 CDS NP_860531.1 32266499 1492689 complement(978924..979496) 1 NC_004917.1 similar to Helicobacter pylori HP1162; predicted membrane-associated; hypothetical protein 979496 1492689 HH1000 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860531.1 978924 R 235279 CDS NP_860532.1 32266500 1492690 complement(979529..980221) 1 NC_004917.1 ATP-binding component; ABC transporter 980221 ybbA 1492690 ybbA Helicobacter hepaticus ATCC 51449 ABC transporter NP_860532.1 979529 R 235279 CDS NP_860533.1 32266501 1492691 980385..980918 1 NC_004917.1 similar to Helicobacter pylori secreted protein; hypothetical protein 980918 1492691 HH1002 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860533.1 980385 D 235279 CDS NP_860534.1 32266502 1492692 complement(980432..980923) 1 NC_004917.1 similar to Helicobacter pylori JHP1206; predicted secreted protein; hypothetical protein 980923 1492692 HH1003 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860534.1 980432 R 235279 CDS NP_860535.1 32266503 1492693 complement(981080..981193) 1 NC_004917.1 hypothetical protein 981193 1492693 HH1004 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860535.1 981080 R 235279 CDS NP_860536.1 32266504 1492694 complement(981360..982226) 1 NC_004917.1 similar to two-component response regulator proteins; hypothetical protein 982226 1492694 HH1005 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860536.1 981360 R 235279 CDS NP_860537.1 32266505 1492695 complement(982465..983694) 1 NC_004917.1 cytochrome b subunit; ubiquinol cytochrome c oxidoreductase 983694 1492695 HH1006 Helicobacter hepaticus ATCC 51449 ubiquinol cytochrome c oxidoreductase NP_860537.1 982465 R 235279 CDS NP_860538.1 32266506 1492696 complement(983704..984213) 1 NC_004917.1 2Fe-2S subunit; ubiquinol cytochrome C oxidoreductase 984213 1492696 HH1007 Helicobacter hepaticus ATCC 51449 ubiquinol cytochrome C oxidoreductase NP_860538.1 983704 R 235279 CDS NP_860539.1 32266507 1492697 984364..985188 1 NC_004917.1 NH(3)-dependent NAD(+) synthetase NadE 985188 nadE 1492697 nadE Helicobacter hepaticus ATCC 51449 NH(3)-dependent NAD(+) synthetase NadE NP_860539.1 984364 D 235279 CDS NP_860540.1 32266508 1492698 985198..986100 1 NC_004917.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; tetraacyldisaccharide 4'-kinase 986100 lpxK 1492698 lpxK Helicobacter hepaticus ATCC 51449 tetraacyldisaccharide 4'-kinase NP_860540.1 985198 D 235279 CDS NP_860541.1 32266509 1492699 986130..986588 1 NC_004917.1 bacterioferritin comigratory protein Bcp 986588 bcp 1492699 bcp Helicobacter hepaticus ATCC 51449 bacterioferritin comigratory protein Bcp NP_860541.1 986130 D 235279 CDS NP_860542.1 32266510 1492700 complement(986623..989271) 1 NC_004917.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; translation initiation factor IF-2 989271 infB 1492700 infB Helicobacter hepaticus ATCC 51449 translation initiation factor IF-2 NP_860542.1 986623 R 235279 CDS NP_860543.1 32266511 1492701 complement(989259..989510) 1 NC_004917.1 similar to Helicobacter pylori HP1049; hypothetical protein 989510 1492701 HH1012 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860543.1 989259 R 235279 CDS NP_860544.1 32266512 1492702 complement(989530..990429) 1 NC_004917.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; homoserine kinase 990429 thrB 1492702 thrB Helicobacter hepaticus ATCC 51449 homoserine kinase NP_860544.1 989530 R 235279 CDS NP_860545.1 32266513 1492703 complement(990546..991031) 1 NC_004917.1 similar to Helicobacter pylori JHP0374; hypothetical protein 991031 1492703 HH1014 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860545.1 990546 R 235279 CDS NP_860546.1 32266514 1492704 complement(991065..991964) 1 NC_004917.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase 991964 lpxC 1492704 lpxC Helicobacter hepaticus ATCC 51449 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase NP_860546.1 991065 R 235279 CDS NP_860547.1 32266515 1492705 complement(991961..992557) 1 NC_004917.1 blocks the formation of polar Z-ring septums; septum formation inhibitor 992557 minC 1492705 minC Helicobacter hepaticus ATCC 51449 septum formation inhibitor NP_860547.1 991961 R 235279 CDS NP_860548.1 32266516 1492706 complement(992571..993956) 1 NC_004917.1 similar to Campylobacter jejuni CJ0131; predicted secreted protein; hypothetical protein 993956 1492706 HH1017 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860548.1 992571 R 235279 CDS NP_860549.1 32266517 1492707 complement(994014..995141) 1 NC_004917.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; flagellar biosynthesis protein FlhB 995141 flhB 1492707 flhB Helicobacter hepaticus ATCC 51449 flagellar biosynthesis protein FlhB NP_860549.1 994014 R 235279 CDS NP_860550.1 32266518 1492708 complement(995145..995714) 1 NC_004917.1 MobA; links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide; involved in molybdenum cofactor biosynthesis; molybdopterin-guanine dinucleotide biosynthesis protein A 995714 mobA 1492708 mobA Helicobacter hepaticus ATCC 51449 molybdopterin-guanine dinucleotide biosynthesis protein A NP_860550.1 995145 R 235279 CDS NP_860551.1 32266519 1492709 995808..996806 1 NC_004917.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; molybdenum cofactor biosynthesis protein A 996806 moaA 1492709 moaA Helicobacter hepaticus ATCC 51449 molybdenum cofactor biosynthesis protein A NP_860551.1 995808 D 235279 CDS NP_860552.1 32266520 1492710 996902..997987 1 NC_004917.1 similar to Campylobacter jejuni CJ1368; hypothetical protein 997987 1492710 HH1021 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860552.1 996902 D 235279 CDS NP_860553.1 32266521 1492711 998096..1000483 1 NC_004917.1 P-type; CopA-like; cation-transporting ATPase 1000483 1492711 HH1022 Helicobacter hepaticus ATCC 51449 cation-transporting ATPase NP_860553.1 998096 D 235279 CDS NP_860554.1 32266522 1492712 1000593..1001708 1 NC_004917.1 similar to Campylobacter jejuni CJ0069; hypothetical protein 1001708 1492712 HH1023 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860554.1 1000593 D 235279 CDS NP_860555.1 32266523 1492713 complement(1001785..1001988) 1 NC_004917.1 hypothetical protein 1001988 1492713 HH1024 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860555.1 1001785 R 235279 CDS NP_860556.1 32266524 1492714 1002152..1004662 1 NC_004917.1 similar to Escherichia coli Z1202; predicted helicase; hypothetical protein 1004662 1492714 HH1025 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860556.1 1002152 D 235279 CDS NP_860557.1 32266525 1492715 complement(1004715..1005527) 1 NC_004917.1 similar to Thermotoga maritima oxidoreductasealdo/keto reductase; hypothetical protein 1005527 1492715 HH1026 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860557.1 1004715 R 235279 CDS NP_860558.1 32266526 1492716 1005984..1006652 1 NC_004917.1 similar to Escherichia coli YfcA; predicted membrane-associated; hypothetical protein 1006652 1492716 HH1027 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860558.1 1005984 D 235279 CDS NP_860559.1 32266527 1492717 1007202..1007378 1 NC_004917.1 predicted secreted protein; hypothetical protein 1007378 1492717 HH1028 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860559.1 1007202 D 235279 CDS NP_860560.1 32266528 1492718 complement(1007349..1009586) 1 NC_004917.1 hypothetical protein 1009586 1492718 HH1029 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860560.1 1007349 R 235279 CDS NP_860561.1 32266529 1492719 complement(1009583..1011262) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1011262 1492719 HH1030 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860561.1 1009583 R 235279 CDS NP_860562.1 32266530 1492720 complement(1011450..1011923) 1 NC_004917.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; flavodoxin 1011923 1492720 HH1031 Helicobacter hepaticus ATCC 51449 flavodoxin NP_860562.1 1011450 R 235279 CDS NP_860563.1 32266531 1492721 complement(1011898..1012296) 1 NC_004917.1 hypothetical protein 1012296 1492721 HH1032 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860563.1 1011898 R 235279 CDS NP_860564.1 32266532 1492722 complement(1012403..1013440) 1 NC_004917.1 similar to Escherichia coli Z0347; predicted secreted protein; hypothetical protein 1013440 1492722 HH1033 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860564.1 1012403 R 235279 CDS NP_860565.1 32266533 1492723 complement(1013457..1014530) 1 NC_004917.1 predicted oxidoreductase; hypothetical protein 1014530 1492723 HH1034 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860565.1 1013457 R 235279 CDS NP_860566.1 32266534 1492724 1014704..1015282 1 NC_004917.1 hypothetical protein 1015282 1492724 HH1035 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860566.1 1014704 D 235279 CDS NP_860567.1 32266535 1492725 1015368..1015832 1 NC_004917.1 predicted secreted protein; hypothetical protein 1015832 1492725 HH1036 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860567.1 1015368 D 235279 CDS NP_860568.1 32266536 1492726 1015879..1016391 1 NC_004917.1 methylated DNA-protein cysteine methyltransferase 1016391 ogt 1492726 ogt Helicobacter hepaticus ATCC 51449 methylated DNA-protein cysteine methyltransferase NP_860568.1 1015879 D 235279 CDS NP_860569.1 32266537 1492727 1016511..1017746 1 NC_004917.1 modification methylase; type II R/M system 1017746 1492727 HH1038 Helicobacter hepaticus ATCC 51449 type II R/M system NP_860569.1 1016511 D 235279 CDS NP_860570.1 32266538 1492728 1017751..1019649 1 NC_004917.1 hypothetical protein 1019649 1492728 HH1039 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860570.1 1017751 D 235279 CDS NP_860571.1 32266539 1492729 1019651..1021045 1 NC_004917.1 hypothetical protein 1021045 1492729 HH1040 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860571.1 1019651 D 235279 CDS NP_860572.1 32266540 1492730 1021081..1021443 1 NC_004917.1 hypothetical protein 1021443 1492730 HH1041 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860572.1 1021081 D 235279 CDS NP_860573.1 32266541 1492731 complement(1021476..1022060) 1 NC_004917.1 predicted transcriptional regulator; hypothetical protein 1022060 1492731 HH1042 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860573.1 1021476 R 235279 CDS NP_860574.1 32266542 1492732 complement(1022057..1022470) 1 NC_004917.1 hypothetical protein 1022470 1492732 HH1043 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860574.1 1022057 R 235279 CDS NP_860575.1 32266543 1492733 complement(1022471..1023229) 1 NC_004917.1 hypothetical protein 1023229 1492733 HH1044 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860575.1 1022471 R 235279 CDS NP_860576.1 32266544 1492734 1023447..1024712 1 NC_004917.1 predicted secreted protein; hypothetical protein 1024712 1492734 HH1045 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860576.1 1023447 D 235279 CDS NP_860577.1 32266545 1492735 1024751..1025416 1 NC_004917.1 predicted acetyltransferase; hypothetical protein 1025416 1492735 HH1046 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860577.1 1024751 D 235279 CDS NP_860578.1 32266546 1492736 1025545..1025679 1 NC_004917.1 hypothetical protein 1025679 1492736 HH1047 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860578.1 1025545 D 235279 CDS NP_860579.1 32266547 1492737 complement(1025763..1026626) 1 NC_004917.1 arginase 1026626 rocF 1492737 rocF Helicobacter hepaticus ATCC 51449 arginase NP_860579.1 1025763 R 235279 CDS NP_860580.1 32266548 1492738 1026748..1027860 1 NC_004917.1 predicted secreted protein; hypothetical protein 1027860 1492738 HH1049 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860580.1 1026748 D 235279 CDS NP_860581.1 32266549 1492739 complement(1027876..1028889) 1 NC_004917.1 similar to Helicobacter pylori ulcer associated adenine specific DNA methyltransferase IceA; hypothetical protein 1028889 1492739 HH1050 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860581.1 1027876 R 235279 CDS NP_860582.1 32266550 1492740 complement(1028893..1029567) 1 NC_004917.1 similar to Neisseria lactamica type II restriction endonuclease; hypothetical protein 1029567 1492740 HH1051 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860582.1 1028893 R 235279 CDS NP_860583.1 32266551 1492741 1029637..1029759 1 NC_004917.1 hypothetical protein 1029759 1492741 HH1052 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860583.1 1029637 D 235279 CDS NP_860584.1 32266552 1492742 complement(1029756..1029863) 1 NC_004917.1 hypothetical protein 1029863 1492742 HH1053 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860584.1 1029756 R 235279 CDS NP_860585.1 32266553 1492743 1029866..1030384 1 NC_004917.1 similar to Listeria monocytogenes LMO2438; hypothetical protein 1030384 1492743 HH1054 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860585.1 1029866 D 235279 CDS NP_860586.1 32266554 1492744 complement(1030381..1030503) 1 NC_004917.1 hypothetical protein 1030503 1492744 HH1055 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860586.1 1030381 R 235279 CDS NP_860587.1 32266555 1492745 complement(1030508..1030915) 1 NC_004917.1 similar to Campylobacter jejuni CJ1556; hypothetical protein 1030915 1492745 HH1056 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860587.1 1030508 R 235279 CDS NP_860588.1 32266556 1492746 1031045..1031665 1 NC_004917.1 similar to Campylobacter jejuni CJ1555c; hypothetical protein 1031665 1492746 HH1057 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860588.1 1031045 D 235279 CDS NP_860589.1 32266557 1492747 1031695..1031820 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1031820 1492747 HH1058 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860589.1 1031695 D 235279 CDS NP_860590.1 32266558 1492748 1031810..1032202 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1032202 1492748 HH1059 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860590.1 1031810 D 235279 CDS NP_860591.1 32266559 1492749 1032321..1032878 1 NC_004917.1 similar to Listeria monocytogenes LMO2083; hypothetical protein 1032878 1492749 HH1060 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860591.1 1032321 D 235279 CDS NP_860592.1 32266560 1492750 1032985..1034748 1 NC_004917.1 similar to Helicobacter pylori JHP0572; hypothetical protein 1034748 1492750 HH1061 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860592.1 1032985 D 235279 CDS NP_860593.1 32266561 1492751 1034767..1035177 1 NC_004917.1 hypothetical protein 1035177 1492751 HH1062 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860593.1 1034767 D 235279 CDS NP_860594.1 32266562 1492752 1035272..1036153 1 NC_004917.1 similar to Bacillus subtilis aminoglycoside 6-adenyltransferase AAD(6); hypothetical protein 1036153 1492752 HH1063 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860594.1 1035272 D 235279 CDS NP_860595.1 32266563 1492753 1036272..1037438 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1037438 1492753 HH1064 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860595.1 1036272 D 235279 CDS NP_860596.1 32266564 1492754 1037674..1038366 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1038366 1492754 HH1065 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860596.1 1037674 D 235279 CDS NP_860597.1 32266565 1492755 complement(1038471..1039169) 1 NC_004917.1 similar to Helicobacter pylori JHP0907; predicted secreted protein; hypothetical protein 1039169 1492755 HH1066 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860597.1 1038471 R 235279 CDS NP_860598.1 32266566 1492756 1039241..1041352 1 NC_004917.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; glycyl-tRNA synthetase subunit beta 1041352 glyS 1492756 glyS Helicobacter hepaticus ATCC 51449 glycyl-tRNA synthetase subunit beta NP_860598.1 1039241 D 235279 CDS NP_860599.1 32266567 1492757 1041349..1042470 1 NC_004917.1 similar to Helicobacter pylori HP1486; hypothetical protein 1042470 1492757 HH1068 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860599.1 1041349 D 235279 CDS NP_860600.1 32266568 1492758 1042614..1042838 1 NC_004917.1 hypothetical protein 1042838 1492758 HH1069 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860600.1 1042614 D 235279 CDS NP_860601.1 32266569 1492759 complement(1042847..1043611) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1043611 1492759 HH1070 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860601.1 1042847 R 235279 CDS NP_860602.1 32266570 1492760 complement(1043638..1044705) 1 NC_004917.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; elongation factor Ts 1044705 tsf 1492760 tsf Helicobacter hepaticus ATCC 51449 elongation factor Ts NP_860602.1 1043638 R 235279 CDS NP_860603.1 32266571 1492761 complement(1044707..1045501) 1 NC_004917.1 one of the last subunits in the assembly of the 30S subunit; absence of S2 does not inhibit assembly but results in an inactive subunit; 30S ribosomal protein S2 1045501 rpsB 1492761 rpsB Helicobacter hepaticus ATCC 51449 30S ribosomal protein S2 NP_860603.1 1044707 R 235279 CDS NP_860604.1 32266572 1492762 1045584..1045679 1 NC_004917.1 hypothetical protein 1045679 1492762 HH1073 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860604.1 1045584 D 235279 CDS NP_860605.1 32266573 1492763 complement(1045704..1047014) 1 NC_004917.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; RNA polymerase factor sigma-54 1047014 rpoN 1492763 rpoN Helicobacter hepaticus ATCC 51449 RNA polymerase factor sigma-54 NP_860605.1 1045704 R 235279 CDS NP_860606.1 32266574 1492764 complement(1047011..1047733) 1 NC_004917.1 ABC-transporter ATP-binding protein 1047733 yhbG 1492764 yhbG Helicobacter hepaticus ATCC 51449 ABC-transporter ATP-binding protein NP_860606.1 1047011 R 235279 CDS NP_860607.1 32266575 1492765 complement(1047730..1048164) 1 NC_004917.1 similar to Helicobacter pylori HP0716; hypothetical protein 1048164 1492765 HH1076 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860607.1 1047730 R 235279 CDS NP_860608.1 32266576 1492766 complement(1048157..1049752) 1 NC_004917.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; DNA polymerase III subunits gamma and tau 1049752 dnaX 1492766 dnaX Helicobacter hepaticus ATCC 51449 DNA polymerase III subunits gamma and tau NP_860608.1 1048157 R 235279 CDS NP_860609.1 32266577 1492767 1049733..1049843 1 NC_004917.1 hypothetical protein 1049843 1492767 HH1078 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860609.1 1049733 D 235279 CDS NP_860610.1 32266578 1492768 complement(1049898..1050530) 1 NC_004917.1 similar to Campylobacter jejuni CJ0593c; predicted membrane-associated; hypothetical protein 1050530 1492768 HH1079 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860610.1 1049898 R 235279 CDS NP_860611.1 32266579 1492769 1050591..1050707 1 NC_004917.1 hypothetical protein 1050707 1492769 HH1080 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860611.1 1050591 D 235279 CDS NP_860612.1 32266580 1492770 1050682..1051470 1 NC_004917.1 makes up the distal portion of the flagellar basal body rod; flagellar basal body rod protein FlgG 1051470 flgG 1492770 flgG Helicobacter hepaticus ATCC 51449 flagellar basal body rod protein FlgG NP_860612.1 1050682 D 235279 CDS NP_860613.1 32266581 1492771 complement(1051483..1052742) 1 NC_004917.1 similar to Campylobacter jejuni CJ0609c; hypothetical protein 1052742 1492771 HH1082 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860613.1 1051483 R 235279 CDS NP_860614.1 32266582 1492772 complement(1052733..1054055) 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein CJ0610c; hypothetical protein 1054055 1492772 HH1083 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860614.1 1052733 R 235279 CDS NP_860615.1 32266583 1492773 complement(1054098..1055510) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1055510 1492773 HH1084 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860615.1 1054098 R 235279 CDS NP_860616.1 32266584 1492774 complement(1055672..1056340) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1056340 1492774 HH1085 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860616.1 1055672 R 235279 CDS NP_860617.1 32266585 1492775 complement(1056454..1057668) 1 NC_004917.1 similar to Xylella fastidiosa XF1738; predicted membrane-associated; hypothetical protein 1057668 1492775 HH1086 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860617.1 1056454 R 235279 CDS NP_860618.1 32266586 1492776 complement(1057760..1058146) 1 NC_004917.1 possible transcriptional regulator; hypothetical protein 1058146 1492776 HH1087 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860618.1 1057760 R 235279 CDS NP_860619.1 32266587 1492777 complement(1058232..1060208) 1 NC_004917.1 similar to Campylobacter jejuni methyl-accepting chemotaxis signal transduction protein CJ1564; hypothetical protein 1060208 1492777 HH1088 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860619.1 1058232 R 235279 CDS NP_860620.1 32266588 1492778 1060339..1060446 1 NC_004917.1 hypothetical protein 1060446 1492778 HH1089 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860620.1 1060339 D 235279 CDS NP_860621.1 32266589 1492779 1060468..1061301 1 NC_004917.1 similar to HP1092 (FlgG1/FlgF); flagellar distal rod protein FlgG 1061301 flgG_1 1492779 flgG_1 Helicobacter hepaticus ATCC 51449 flagellar distal rod protein FlgG NP_860621.1 1060468 D 235279 CDS NP_860622.1 32266590 1492780 1061331..1063022 1 NC_004917.1 modification subunit; type I restriction enzyme 1063022 1492780 HH1091 Helicobacter hepaticus ATCC 51449 type I restriction enzyme NP_860622.1 1061331 D 235279 CDS NP_860623.1 32266591 1492781 1063023..1063538 1 NC_004917.1 hypothetical protein 1063538 1492781 HH1092 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860623.1 1063023 D 235279 CDS NP_860624.1 32266592 1492782 1063535..1064248 1 NC_004917.1 similar to Helicobacter pylori HP1221; hypothetical protein 1064248 1492782 HH1093 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860624.1 1063535 D 235279 CDS NP_860625.1 32266593 1492783 1064330..1065544 1 NC_004917.1 malate oxidoreductase 1065544 1492783 HH1094 Helicobacter hepaticus ATCC 51449 malate oxidoreductase NP_860625.1 1064330 D 235279 CDS NP_860626.1 32266594 1492784 complement(1065853..1065990) 1 NC_004917.1 hypothetical protein 1065990 1492784 HH1095 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860626.1 1065853 R 235279 CDS NP_860627.1 32266595 1492785 complement(1066084..1066548) 1 NC_004917.1 hypothetical protein 1066548 1492785 HH1096 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860627.1 1066084 R 235279 CDS NP_860628.1 32266596 1492786 complement(1066717..1067298) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1067298 1492786 HH1097 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860628.1 1066717 R 235279 CDS NP_860629.1 32266597 1492787 complement(1067292..1068890) 1 NC_004917.1 similar to Helicobacter pylori HP1507; hypothetical protein 1068890 1492787 HH1098 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860629.1 1067292 R 235279 CDS NP_860630.1 32266598 1492788 1069035..1070015 1 NC_004917.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 1070015 lpxD 1492788 lpxD Helicobacter hepaticus ATCC 51449 UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase NP_860630.1 1069035 D 235279 CDS NP_860631.1 32266599 1492789 1070053..1071432 1 NC_004917.1 serine transporter 1071432 sdaC 1492789 sdaC Helicobacter hepaticus ATCC 51449 serine transporter NP_860631.1 1070053 D 235279 CDS NP_860632.1 32266600 1492790 complement(1071438..1071545) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1071545 1492790 HH1101 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860632.1 1071438 R 235279 CDS NP_860633.1 32266601 1493155 complement(1071562..1072686) 1 NC_004917.1 subunit II; cytochrome bd quinol oxidase 1072686 cydB 1493155 cydB Helicobacter hepaticus ATCC 51449 cytochrome bd quinol oxidase NP_860633.1 1071562 R 235279 CDS NP_860634.1 32266602 1492791 complement(1072686..1074260) 1 NC_004917.1 subunit I; cytochrome bd quinol oxidase 1074260 cydA 1492791 cydA Helicobacter hepaticus ATCC 51449 cytochrome bd quinol oxidase NP_860634.1 1072686 R 235279 CDS NP_860635.1 32266603 1492792 complement(1074287..1074538) 1 NC_004917.1 similar to Campylobacter jejuni CJ0080; hypothetical protein 1074538 1492792 HH1104 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860635.1 1074287 R 235279 CDS NP_860636.1 32266604 1492793 1074682..1077012 1 NC_004917.1 similar to Campylobacter jejuni CJ0411; predicted ATP/GTP binding protein; hypothetical protein 1077012 1492793 HH1105 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860636.1 1074682 D 235279 CDS NP_860637.1 32266605 1492794 1077025..1078869 1 NC_004917.1 similar to Campylobacter jejuni CJ0412; predicted ATP/GTP binding protein; hypothetical protein 1078869 1492794 HH1106 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860637.1 1077025 D 235279 CDS NP_860638.1 32266606 1492795 1078876..1079049 1 NC_004917.1 predicted secreted protein; hypothetical protein 1079049 1492795 HH1107 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860638.1 1078876 D 235279 CDS NP_860639.1 32266607 1492796 1079084..1079263 1 NC_004917.1 hypothetical protein 1079263 1492796 HH1108 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860639.1 1079084 D 235279 CDS NP_860640.1 32266608 1492797 complement(1079407..1080597) 1 NC_004917.1 similar to Campylobacter jejuni efflux protein CJ1687; hypothetical protein 1080597 1492797 HH1109 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860640.1 1079407 R 235279 CDS NP_860641.1 32266609 1492798 complement(1080619..1081989) 1 NC_004917.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself.; chromosome replication initiator DnaA 1081989 dnaA 1492798 dnaA Helicobacter hepaticus ATCC 51449 chromosome replication initiator DnaA NP_860641.1 1080619 R 235279 CDS NP_860642.1 32266610 1492799 1082089..1082646 1 NC_004917.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Holliday junction resolvase 1082646 ruvC 1492799 ruvC Helicobacter hepaticus ATCC 51449 Holliday junction resolvase NP_860642.1 1082089 D 235279 CDS NP_860643.1 32266611 1492800 1082643..1084046 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1084046 1492800 HH1112 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860643.1 1082643 D 235279 CDS NP_860644.1 32266612 1492801 1084036..1084674 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1084674 1492801 HH1113 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860644.1 1084036 D 235279 CDS NP_860645.1 32266613 1492802 1084671..1085057 1 NC_004917.1 predicted secreted protein; hypothetical protein 1085057 1492802 HH1114 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860645.1 1084671 D 235279 CDS NP_860646.1 32266614 1492803 1085054..1086655 1 NC_004917.1 similar to Neisseria meningitidis pilin PilQ; hypothetical protein 1086655 1492803 HH1115 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860646.1 1085054 D 235279 CDS NP_860647.1 32266615 1492804 1086655..1088223 1 NC_004917.1 similar to Neisseria meningitidis pilin PilT; hypothetical protein 1088223 gspE 1492804 gspE Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860647.1 1086655 D 235279 CDS NP_860648.1 32266616 1492805 1088211..1089455 1 NC_004917.1 similar to Neisseria meningitidis pilin PilG; hypothetical protein 1089455 1492805 HH1117 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860648.1 1088211 D 235279 CDS NP_860649.1 32266617 1492806 complement(1089442..1090548) 1 NC_004917.1 hypothetical protein 1090548 1492806 HH1118 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860649.1 1089442 R 235279 CDS NP_860650.1 32266618 1492807 1090590..1090733 1 NC_004917.1 hypothetical protein 1090733 1492807 HH1119 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860650.1 1090590 D 235279 CDS NP_860651.2 161546628 1492808 1090633..1091283 1 NC_004917.1 flavin dependent thymidylate synthase; ThyX; thymidylate synthase complementing protein; catalyzes the formation of dTMP and tetrahydrofolate from dUMP and methylenetetrahydrofolate; the enzyme from Mycobacterium tuberculosis forms homotetramers; uses FAD as a cofactor; FAD-dependent thymidylate synthase 1091283 thyX 1492808 thyX Helicobacter hepaticus ATCC 51449 FAD-dependent thymidylate synthase NP_860651.2 1090633 D 235279 CDS NP_860652.1 32266620 1492809 complement(1091289..1091885) 1 NC_004917.1 hypothetical protein 1091885 1492809 HH1121 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860652.1 1091289 R 235279 CDS NP_860653.1 32266621 1492810 complement(1091882..1092658) 1 NC_004917.1 similar to Helicobacter pylori HP1464; predicted membrane-associated; hypothetical protein 1092658 1492810 HH1122 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860653.1 1091882 R 235279 CDS NP_860654.1 32266622 1492811 complement(1092643..1093449) 1 NC_004917.1 ATP-binding component; ABC transporter 1093449 1492811 HH1123 Helicobacter hepaticus ATCC 51449 ABC transporter NP_860654.1 1092643 R 235279 CDS NP_860655.1 32266623 1492812 complement(1093446..1094492) 1 NC_004917.1 similar to Helicobacter pylori HP1466; predicted ABC transporter; hypothetical protein 1094492 1492812 HH1124 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860655.1 1093446 R 235279 CDS NP_860656.1 32266624 1492813 1094687..1094791 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1094791 1492813 HH1125 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860656.1 1094687 D 235279 CDS NP_860657.1 32266625 1492814 1094815..1095876 1 NC_004917.1 binds the polymerase to DNA and acts as a sliding clamp; DNA polymerase III subunit beta 1095876 dnaN 1492814 dnaN Helicobacter hepaticus ATCC 51449 DNA polymerase III subunit beta NP_860657.1 1094815 D 235279 CDS NP_860658.1 32266626 1492815 1095901..1098219 1 NC_004917.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit B 1098219 gyrB 1492815 gyrB Helicobacter hepaticus ATCC 51449 DNA gyrase subunit B NP_860658.1 1095901 D 235279 CDS NP_860659.1 32266627 1492816 complement(1098232..1099386) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1099386 1492816 HH1128 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860659.1 1098232 R 235279 CDS NP_860660.1 32266628 1492817 complement(1099396..1100643) 1 NC_004917.1 may become fused with HH1130 due to slipped strand mispairing; alginate O- acetylation protein 1100643 1492817 HH1129 Helicobacter hepaticus ATCC 51449 alginate O- acetylation protein NP_860660.1 1099396 R 235279 CDS NP_860661.1 32266629 1492818 complement(1100834..1101136) 1 NC_004917.1 may become fused with HH1129 due to slipped strand mispairing; alginate O- acetylation protein 1101136 1492818 HH1130 Helicobacter hepaticus ATCC 51449 alginate O- acetylation protein NP_860661.1 1100834 R 235279 CDS NP_860662.1 32266630 1492819 complement(1101120..1101302) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1101302 1492819 HH1131 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860662.1 1101120 R 235279 CDS NP_860663.1 32266631 1492820 complement(1101305..1101466) 1 NC_004917.1 hypothetical protein 1101466 1492820 HH1132 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860663.1 1101305 R 235279 CDS NP_860664.1 32266632 1492821 complement(1101584..1101727) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1101727 1492821 HH1133 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860664.1 1101584 R 235279 CDS NP_860665.1 32266633 1492822 complement(1101727..1102677) 1 NC_004917.1 isopropylmalate dehydrogenase 1102677 leuB 1492822 leuB Helicobacter hepaticus ATCC 51449 isopropylmalate dehydrogenase NP_860665.1 1101727 R 235279 CDS NP_860666.1 32266634 1492823 complement(1102817..1103314) 1 NC_004917.1 small subunit; 3-isopropylmalate dehydratase 1103314 leuD 1492823 leuD Helicobacter hepaticus ATCC 51449 3-isopropylmalate dehydratase NP_860666.1 1102817 R 235279 CDS NP_860667.1 32266635 1492824 complement(1103370..1104632) 1 NC_004917.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; 3-isopropylmalate dehydratase large subunit 1104632 leuC 1492824 leuC Helicobacter hepaticus ATCC 51449 3-isopropylmalate dehydratase large subunit NP_860667.1 1103370 R 235279 CDS NP_860668.1 32266636 1492825 complement(1104648..1106324) 1 NC_004917.1 2-isopropylmalate synthase 1106324 leuA 1492825 leuA Helicobacter hepaticus ATCC 51449 2-isopropylmalate synthase NP_860668.1 1104648 R 235279 CDS NP_860669.1 32266637 1492826 complement(1106493..1106693) 1 NC_004917.1 hypothetical protein 1106693 1492826 HH1138 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860669.1 1106493 R 235279 CDS NP_860670.1 32266638 1492827 1106723..1106827 1 NC_004917.1 hypothetical protein 1106827 1492827 HH1139 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860670.1 1106723 D 235279 CDS NP_860671.1 32266639 1492828 1106917..1107765 1 NC_004917.1 Important for the balance of metabolites in the pentose-phosphate pathway; transaldolase 1107765 tal 1492828 tal Helicobacter hepaticus ATCC 51449 transaldolase NP_860671.1 1106917 D 235279 CDS NP_860672.1 32266640 1492829 complement(1107776..1108522) 1 NC_004917.1 similar to Helicobacter pylori HP0231; possible protein disulfide isomerase; hypothetical protein 1108522 1492829 HH1141 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860672.1 1107776 R 235279 CDS NP_860673.1 32266641 1492830 1108600..1109127 1 NC_004917.1 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 1109127 folK 1492830 folK Helicobacter hepaticus ATCC 51449 7, 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase NP_860673.1 1108600 D 235279 CDS NP_860674.1 32266642 1492831 1109219..1110670 1 NC_004917.1 positive regulator of class III flagellar genes; flagellar biosynthesis regulator FlhF 1110670 flhF 1492831 flhF Helicobacter hepaticus ATCC 51449 flagellar biosynthesis regulator FlhF NP_860674.1 1109219 D 235279 CDS NP_860675.1 32266643 1492832 1110683..1111555 1 NC_004917.1 similar to Helicobacter pylori HP1034; predicted ATP-binding protein; hypothetical protein 1111555 1492832 HH1144 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860675.1 1110683 D 235279 CDS NP_860676.1 32266644 1492833 1111580..1111936 1 NC_004917.1 similar to Helicobacter pylori JHP0391; predicted membrane-associated; hypothetical protein 1111936 1492833 HH1145 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860676.1 1111580 D 235279 CDS NP_860677.2 161546627 1492834 1111948..1112655 1 NC_004917.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; flagellar biosynthesis sigma factor 1112655 fliA 1492834 fliA Helicobacter hepaticus ATCC 51449 flagellar biosynthesis sigma factor NP_860677.2 1111948 D 235279 CDS NP_860678.1 32266646 1492835 1112648..1113709 1 NC_004917.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; flagellar motor switch protein FliM 1113709 fliM 1492835 fliM Helicobacter hepaticus ATCC 51449 flagellar motor switch protein FliM NP_860678.1 1112648 D 235279 CDS NP_860679.1 32266647 1492836 1113706..1114542 1 NC_004917.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein FliY 1114542 fliY 1492836 fliY Helicobacter hepaticus ATCC 51449 flagellar motor switch protein FliY NP_860679.1 1113706 D 235279 CDS NP_860680.1 32266648 1492837 complement(1114619..1114822) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1114822 1492837 HH1149 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860680.1 1114619 R 235279 CDS NP_860681.1 32266649 1492838 1114921..1115544 1 NC_004917.1 hypothetical protein 1115544 1492838 HH1150 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860681.1 1114921 D 235279 CDS NP_860682.1 32266650 1492839 1115558..1116892 1 NC_004917.1 hypothetical protein 1116892 1492839 HH1151 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860682.1 1115558 D 235279 CDS NP_860683.1 32266651 1492840 1116993..1117568 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1117568 1492840 HH1152 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860683.1 1116993 D 235279 CDS NP_860684.1 32266652 1492841 complement(1117565..1118536) 1 NC_004917.1 similar to Helicobacter pylori HP1164; predicted thioredoxin reductase; hypothetical protein 1118536 trxB_2 1492841 trxB_2 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860684.1 1117565 R 235279 CDS NP_860685.1 32266653 1492842 complement(1118529..1118753) 1 NC_004917.1 similar to Helicobacter pylori HP1163; predicted secreted protein; hypothetical protein 1118753 1492842 HH1154 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860685.1 1118529 R 235279 CDS NP_860686.1 32266654 1492843 1118909..1120579 1 NC_004917.1 similar to methyl-accepting chemotaxis proteins; hypothetical protein 1120579 1492843 HH1155 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860686.1 1118909 D 235279 CDS NP_860687.1 32266655 1492844 complement(1120604..1122490) 1 NC_004917.1 catalyzes branch migration in Holliday junction intermediates; ATP-dependent DNA helicase RecG 1122490 recG 1492844 recG Helicobacter hepaticus ATCC 51449 ATP-dependent DNA helicase RecG NP_860687.1 1120604 R 235279 CDS NP_860688.1 32266656 1492845 complement(1122499..1123515) 1 NC_004917.1 glyceraldehyde-3-phosphate dehydrogenase 1123515 gap_1 1492845 gap_1 Helicobacter hepaticus ATCC 51449 glyceraldehyde-3-phosphate dehydrogenase NP_860688.1 1122499 R 235279 CDS NP_860689.1 32266657 1492846 1123611..1124375 1 NC_004917.1 predicted secreted protein; hypothetical protein 1124375 1492846 HH1158 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860689.1 1123611 D 235279 CDS NP_860690.1 32266658 1492847 complement(1124383..1126425) 1 NC_004917.1 similar to Pseudomonas aeruginosa PA1689; predicted membrane-associated; hypothetical protein 1126425 1492847 HH1159 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860690.1 1124383 R 235279 CDS NP_860691.1 32266659 1492848 complement(1126570..1126884) 1 NC_004917.1 thioredoxin 1126884 trxA_1 1492848 trxA_1 Helicobacter hepaticus ATCC 51449 thioredoxin NP_860691.1 1126570 R 235279 CDS NP_860692.1 32266660 1492849 complement(1126893..1127930) 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein; hypothetical protein 1127930 1492849 HH1161 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860692.1 1126893 R 235279 CDS NP_860693.1 32266661 1492850 complement(1128275..1128880) 1 NC_004917.1 similar to Helicobacter pylori JHP1206; predicted secreted protein; hypothetical protein 1128880 1492850 HH1162 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860693.1 1128275 R 235279 CDS NP_860694.1 32266662 1492851 complement(1128891..1129388) 1 NC_004917.1 predicted transcriptional regulator; hypothetical protein 1129388 1492851 HH1163 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860694.1 1128891 R 235279 CDS NP_860695.1 32266663 1492852 1129446..1129655 1 NC_004917.1 hypothetical protein 1129655 1492852 HH1164 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860695.1 1129446 D 235279 CDS NP_860696.1 32266664 1492853 1129745..1132216 1 NC_004917.1 similar to Helicobacter pylori HP0022; predicted membrane-associated; hypothetical protein 1132216 1492853 HH1165 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860696.1 1129745 D 235279 CDS NP_860697.1 32266665 1492854 1132409..1133500 1 NC_004917.1 NADP-dependent alcohol dehydrogenase 1133500 cad 1492854 cad Helicobacter hepaticus ATCC 51449 NADP-dependent alcohol dehydrogenase NP_860697.1 1132409 D 235279 CDS NP_860698.1 32266666 1492855 complement(1133517..1134779) 1 NC_004917.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 1134779 murD 1492855 murD Helicobacter hepaticus ATCC 51449 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase NP_860698.1 1133517 R 235279 CDS NP_860699.1 32266667 1492856 complement(1134789..1135868) 1 NC_004917.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; phospho-N-acetylmuramoyl-pentapeptide- transferase 1135868 mraY 1492856 mraY Helicobacter hepaticus ATCC 51449 phospho-N-acetylmuramoyl-pentapeptide- transferase NP_860699.1 1134789 R 235279 CDS NP_860700.1 32266668 1492857 1135976..1137448 1 NC_004917.1 catalyzes the interconversion of 2-phosphoglycerate and 3-phosphoglycerate; phosphoglyceromutase 1137448 pgm 1492857 pgm Helicobacter hepaticus ATCC 51449 phosphoglyceromutase NP_860700.1 1135976 D 235279 CDS NP_860701.1 32266669 1492858 complement(1137488..1138063) 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein CJ1356c; hypothetical protein 1138063 1492858 HH1170 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860701.1 1137488 R 235279 CDS NP_860702.1 32266670 1492859 complement(1138204..1138443) 1 NC_004917.1 hypothetical protein 1138443 1492859 HH1171 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860702.1 1138204 R 235279 CDS NP_860703.1 32266671 1492860 complement(1138476..1139444) 1 NC_004917.1 similar to Helicobacter pylori capsule biosynthesis protein KpsF (HP1429); hypothetical protein 1139444 1492860 HH1172 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860703.1 1138476 R 235279 CDS NP_860704.1 32266672 1492861 complement(1139457..1141604) 1 NC_004917.1 similar to Helicobacter pylori HP1430; hypothetical protein 1141604 1492861 HH1173 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860704.1 1139457 R 235279 CDS NP_860705.1 32266673 1492862 complement(1141558..1142409) 1 NC_004917.1 catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; dimethyladenosine transferase 1142409 ksgA 1492862 ksgA Helicobacter hepaticus ATCC 51449 dimethyladenosine transferase NP_860705.1 1141558 R 235279 CDS NP_860706.1 32266674 1492863 1142449..1142547 1 NC_004917.1 hypothetical protein 1142547 1492863 HH1175 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860706.1 1142449 D 235279 CDS NP_860707.1 32266675 1492864 1142585..1143340 1 NC_004917.1 cyclase 1143340 hisF 1492864 hisF Helicobacter hepaticus ATCC 51449 cyclase NP_860707.1 1142585 D 235279 CDS NP_860708.1 32266676 1492865 1143435..1144049 1 NC_004917.1 similar to Helicobacter pylori HP1530; hypothetical protein 1144049 1492865 HH1177 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860708.1 1143435 D 235279 CDS NP_860709.1 32266677 1492866 1144064..1145173 1 NC_004917.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; ribosomal RNA large subunit methyltransferase N 1145173 1492866 HH1178 Helicobacter hepaticus ATCC 51449 ribosomal RNA large subunit methyltransferase N NP_860709.1 1144064 D 235279 CDS NP_860710.1 32266678 1492867 1145202..1145297 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1145297 1492867 HH1179 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860710.1 1145202 D 235279 CDS NP_860711.1 32266679 1492868 1145332..1146438 1 NC_004917.1 similar to Helicobacter pylori HP0100; hypothetical protein 1146438 1492868 HH1180 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860711.1 1145332 D 235279 CDS NP_860712.1 32266680 1492869 1146482..1146991 1 NC_004917.1 in Pseudomonas aeruginosa this enzyme is a trimer of dimers; essential for membrane formation; performs third step of type II fatty acid biosynthesis; catalyzes dehydration of (3R)-hydroxyacyl-ACP to trans-2-acyl-ACP; (3R)-hydroxymyristoyl-ACP dehydratase 1146991 fabZ 1492869 fabZ Helicobacter hepaticus ATCC 51449 (3R)-hydroxymyristoyl-ACP dehydratase NP_860712.1 1146482 D 235279 CDS NP_860713.1 32266681 1492870 1147001..1147783 1 NC_004917.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; UDP-N-acetylglucosamine acyltransferase 1147783 lpxA 1492870 lpxA Helicobacter hepaticus ATCC 51449 UDP-N-acetylglucosamine acyltransferase NP_860713.1 1147001 D 235279 CDS NP_860714.1 32266682 1492871 1147776..1149056 1 NC_004917.1 binds and unfolds substrates as part of the ClpXP protease; ATP-dependent protease ATP-binding subunit ClpX 1149056 clpX 1492871 clpX Helicobacter hepaticus ATCC 51449 ATP-dependent protease ATP-binding subunit ClpX NP_860714.1 1147776 D 235279 CDS NP_860715.1 32266683 1492872 1149139..1150173 1 NC_004917.1 functions in MreBCD complex in some organisms; rod shape-determining protein MreB 1150173 mreB 1492872 mreB Helicobacter hepaticus ATCC 51449 rod shape-determining protein MreB NP_860715.1 1149139 D 235279 CDS NP_860716.1 32266684 1492873 1150182..1151069 1 NC_004917.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; rod shape-determining protein MreC 1151069 mreC 1492873 mreC Helicobacter hepaticus ATCC 51449 rod shape-determining protein MreC NP_860716.1 1150182 D 235279 CDS NP_860717.1 32266685 1492874 1150987..1153290 1 NC_004917.1 hypothetical protein 1153290 1492874 HH1186 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860717.1 1150987 D 235279 CDS NP_860718.1 32266686 1492875 1153450..1154892 1 NC_004917.1 predicted secreted protein; hypothetical protein 1154892 1492875 HH1187 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860718.1 1153450 D 235279 CDS NP_860719.1 32266687 1492876 1154913..1156160 1 NC_004917.1 hypothetical protein 1156160 1492876 HH1188 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860719.1 1154913 D 235279 CDS NP_860720.1 32266688 1492877 complement(1156157..1157095) 1 NC_004917.1 similar to Campylobacter jejuni CJ0021c; predicted isomerase; hypothetical protein 1157095 1492877 HH1189 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860720.1 1156157 R 235279 CDS NP_860721.1 32266689 1492878 1157210..1160002 1 NC_004917.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase type 1 subfamily; some organisms carry two different copies of this enzyme; isoleucyl-tRNA synthetase 1160002 ileS 1492878 ileS Helicobacter hepaticus ATCC 51449 isoleucyl-tRNA synthetase NP_860721.1 1157210 D 235279 CDS NP_860722.1 32266690 1492879 1160044..1160190 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1160190 1492879 HH1191 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860722.1 1160044 D 235279 CDS NP_860723.1 32266691 1492880 complement(1160206..1160730) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1160730 1492880 HH1192 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860723.1 1160206 R 235279 CDS NP_860724.1 32266692 1492881 1160896..1161228 1 NC_004917.1 similar to Campylobacter jejuni coiled-coil protein; hypothetical protein 1161228 1492881 HH1193 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860724.1 1160896 D 235279 CDS NP_860725.1 32266693 1492882 1161212..1161523 1 NC_004917.1 similar to Helicobacter pylori HP1391; predicted membrane-associated; hypothetical protein 1161523 1492882 HH1194 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860725.1 1161212 D 235279 CDS NP_860726.1 32266694 1492883 1161593..1162441 1 NC_004917.1 predicted secreted protein; hypothetical protein 1162441 1492883 HH1195 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860726.1 1161593 D 235279 CDS NP_860727.1 32266695 1492884 complement(1162683..1164887) 1 NC_004917.1 isocitrate dehydrogenase 1164887 1492884 HH1196 Helicobacter hepaticus ATCC 51449 isocitrate dehydrogenase NP_860727.1 1162683 R 235279 CDS NP_860728.1 32266696 1492885 complement(1165034..1165243) 1 NC_004917.1 hypothetical protein 1165243 1492885 HH1197 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860728.1 1165034 R 235279 CDS NP_860729.1 32266697 1492886 complement(1165389..1166435) 1 NC_004917.1 similar to Campylobacter jejuni CJ1633; hypothetical protein 1166435 1492886 HH1198 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860729.1 1165389 R 235279 CDS NP_860730.2 161546626 1492887 complement(1166413..1168071) 1 NC_004917.1 synthesizes RNA primers at the replication forks; DNA primase 1168071 dnaG 1492887 dnaG Helicobacter hepaticus ATCC 51449 DNA primase NP_860730.2 1166413 R 235279 CDS NP_860731.1 32266699 1492888 1168356..1168628 1 NC_004917.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; co-chaperonin GroES 1168628 groES 1492888 groES Helicobacter hepaticus ATCC 51449 co-chaperonin GroES NP_860731.1 1168356 D 235279 CDS NP_860732.1 32266700 1492889 1168662..1170299 1 NC_004917.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; molecular chaperone GroEL 1170299 groEL 1492889 groEL Helicobacter hepaticus ATCC 51449 molecular chaperone GroEL NP_860732.1 1168662 D 235279 CDS NP_860733.1 32266701 1492890 complement(1170403..1171128) 1 NC_004917.1 hypothetical protein 1171128 1492890 HH1202 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860733.1 1170403 R 235279 CDS NP_860734.1 32266702 1492891 complement(1171131..1173830) 1 NC_004917.1 phosphoenolpyruvate carboxylase 1173830 ppc 1492891 ppc Helicobacter hepaticus ATCC 51449 phosphoenolpyruvate carboxylase NP_860734.1 1171131 R 235279 CDS NP_860735.1 32266703 1492892 1173945..1174970 1 NC_004917.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; ketol-acid reductoisomerase 1174970 ilvC 1492892 ilvC Helicobacter hepaticus ATCC 51449 ketol-acid reductoisomerase NP_860735.1 1173945 D 235279 CDS NP_860736.1 32266704 1492893 1175065..1176465 1 NC_004917.1 predicted Na+ or K+ uptake protein; hypothetical protein 1176465 ktrB 1492893 ktrB Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860736.1 1175065 D 235279 CDS NP_860737.1 32266705 1492894 1176490..1177149 1 NC_004917.1 predicted potassium uptake protein; hypothetical protein 1177149 ktrA 1492894 ktrA Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860737.1 1176490 D 235279 CDS NP_860738.1 32266706 1492895 complement(1177139..1177900) 1 NC_004917.1 predicted biotin biosynthesis protein BioC; hypothetical protein 1177900 bioC 1492895 bioC Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860738.1 1177139 R 235279 CDS NP_860739.1 32266707 1492896 complement(1177879..1178574) 1 NC_004917.1 similar to Campylobacter jejuni CJ0305c; predicted membrane-associated; hypothetical protein 1178574 1492896 HH1208 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860739.1 1177879 R 235279 CDS NP_860740.1 32266708 1492897 complement(1178571..1179767) 1 NC_004917.1 8-amino-7-oxononanoate synthase 1179767 bioF 1492897 bioF Helicobacter hepaticus ATCC 51449 8-amino-7-oxononanoate synthase NP_860740.1 1178571 R 235279 CDS NP_860741.1 32266709 1492898 1179847..1181160 1 NC_004917.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 1181160 bioA 1492898 bioA Helicobacter hepaticus ATCC 51449 adenosylmethionine-8-amino-7-oxononanoate aminotransferase NP_860741.1 1179847 D 235279 CDS NP_860742.1 32266710 1492899 complement(1181162..1181791) 1 NC_004917.1 dethiobiotin synthetase 1181791 bioD 1492899 bioD Helicobacter hepaticus ATCC 51449 dethiobiotin synthetase NP_860742.1 1181162 R 235279 CDS NP_860743.1 32266711 1492900 complement(1181829..1182758) 1 NC_004917.1 similar to Pseudomonas aeruginosa PA3954; hypothetical protein 1182758 1492900 HH1212 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860743.1 1181829 R 235279 CDS NP_860744.1 32266712 1492901 complement(1182755..1182898) 1 NC_004917.1 hypothetical protein 1182898 1492901 HH1213 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860744.1 1182755 R 235279 CDS NP_860745.1 32266713 1492902 complement(1182873..1183880) 1 NC_004917.1 similar to Bacillus halodurans BH0835; hypothetical protein 1183880 1492902 HH1214 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860745.1 1182873 R 235279 CDS NP_860746.1 32266714 1492903 complement(1183870..1185315) 1 NC_004917.1 similar to Pseudomonas aeruginosa PA2326; hypothetical protein 1185315 1492903 HH1215 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860746.1 1183870 R 235279 CDS NP_860747.1 32266715 1492904 complement(1185656..1185919) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1185919 1492904 HH1216 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860747.1 1185656 R 235279 CDS NP_860748.1 32266716 1492905 1186029..1186238 1 NC_004917.1 predicted secreted protein; hypothetical protein 1186238 1492905 HH1217 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860748.1 1186029 D 235279 CDS NP_860749.1 32266717 1492906 complement(1186427..1186753) 1 NC_004917.1 divalent cation tolerance protein CutA 1186753 cutA 1492906 cutA Helicobacter hepaticus ATCC 51449 divalent cation tolerance protein CutA NP_860749.1 1186427 R 235279 CDS NP_860750.1 32266718 1492907 1186887..1187861 1 NC_004917.1 similar to Helicobacter pylori JHP0437; predicted catalase-like protein; hypothetical protein 1187861 1492907 HH1219 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860750.1 1186887 D 235279 CDS NP_860751.1 32266719 1492908 complement(1187865..1188959) 1 NC_004917.1 similar to Vibrio cholerae VCA0834; predicted membrane-associated; hypothetical protein 1188959 1492908 HH1220 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860751.1 1187865 R 235279 CDS NP_860752.1 32266720 1492909 1189082..1190296 1 NC_004917.1 catalyzes the formation of 2-N(omega)-(L-arginino)succinate from L-citrulline and L-aspartate in arginine biosynthesis, AMP-forming; argininosuccinate synthase 1190296 argG 1492909 argG Helicobacter hepaticus ATCC 51449 argininosuccinate synthase NP_860752.1 1189082 D 235279 CDS NP_860753.1 32266721 1492910 1190297..1191814 1 NC_004917.1 similar to Helicobacter pylori JHP0197; predicted secreted protein; hypothetical protein 1191814 1492910 HH1222 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860753.1 1190297 D 235279 CDS NP_860754.1 32266722 1492911 1191873..1192688 1 NC_004917.1 cell division inhibitor MinD 1192688 minD 1492911 minD Helicobacter hepaticus ATCC 51449 cell division inhibitor MinD NP_860754.1 1191873 D 235279 CDS NP_860755.1 32266723 1492912 1192685..1192921 1 NC_004917.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; cell division topological specificity factor MinE 1192921 minE 1492912 minE Helicobacter hepaticus ATCC 51449 cell division topological specificity factor MinE NP_860755.1 1192685 D 235279 CDS NP_860756.1 32266724 1492913 complement(1192918..1193034) 1 NC_004917.1 hypothetical protein 1193034 1492913 HH1225 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860756.1 1192918 R 235279 CDS NP_860757.1 32266725 1492914 1193051..1193920 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein CJ0633; hypothetical protein 1193920 1492914 HH1226 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860757.1 1193051 D 235279 CDS NP_860758.1 32266726 1492915 1193930..1194721 1 NC_004917.1 possibly involved in DNA uptake; DNA processing protein DprA 1194721 dprA 1492915 dprA Helicobacter hepaticus ATCC 51449 DNA processing protein DprA NP_860758.1 1193930 D 235279 CDS NP_860759.1 32266727 1492916 1194781..1195122 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1195122 1492916 HH1228 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860759.1 1194781 D 235279 CDS NP_860760.1 32266728 1492917 1195122..1195538 1 NC_004917.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Holliday junction resolvase-like protein 1195538 1492917 HH1229 Helicobacter hepaticus ATCC 51449 Holliday junction resolvase-like protein NP_860760.1 1195122 D 235279 CDS NP_860761.1 32266729 1492918 1195703..1196137 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein; hypothetical protein 1196137 1492918 HH1230 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860761.1 1195703 D 235279 CDS NP_860762.1 32266730 1492919 1196390..1197562 1 NC_004917.1 predicted secreted protein; hypothetical protein 1197562 1492919 HH1231 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860762.1 1196390 D 235279 CDS NP_860763.1 32266731 1492920 complement(1197567..1198058) 1 NC_004917.1 similar to Campylobacter jejuni CJ0121; metalloprotease 1198058 1492920 HH1232 Helicobacter hepaticus ATCC 51449 metalloprotease NP_860763.1 1197567 R 235279 CDS NP_860764.1 32266732 1492921 1198153..1200006 1 NC_004917.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; arginine decarboxylase 1200006 speA 1492921 speA Helicobacter hepaticus ATCC 51449 arginine decarboxylase NP_860764.1 1198153 D 235279 CDS NP_860765.1 32266733 1492922 1200006..1200710 1 NC_004917.1 serine acetyltransferase 1200710 cysE 1492922 cysE Helicobacter hepaticus ATCC 51449 serine acetyltransferase NP_860765.1 1200006 D 235279 CDS NP_860766.1 32266734 1492923 complement(1200719..1201744) 1 NC_004917.1 similar to Helicobacter pylori HP0948; predicted membrane-associated; hypothetical protein 1201744 1492923 HH1235 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860766.1 1200719 R 235279 CDS NP_860767.1 32266735 1492924 complement(1201744..1202100) 1 NC_004917.1 DnaK suppressor protein DskA 1202100 dksA 1492924 dksA Helicobacter hepaticus ATCC 51449 DnaK suppressor protein DskA NP_860767.1 1201744 R 235279 CDS NP_860768.2 229220791 1492925 complement(1202110..1202571) 1 NC_004917.1 SPOUT methyltransferase; crystal structure shows homodimer; in Escherichia coli this protein methylates pseudouridine at position 1915 of the 23S ribosomal RNA; rRNA large subunit methyltransferase 1202571 1492925 HH1237 Helicobacter hepaticus ATCC 51449 rRNA large subunit methyltransferase NP_860768.2 1202110 R 235279 CDS NP_860769.1 32266737 1492926 complement(1202543..1203421) 1 NC_004917.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; acetyl-CoA carboxylase subunit beta 1203421 accD 1492926 accD Helicobacter hepaticus ATCC 51449 acetyl-CoA carboxylase subunit beta NP_860769.1 1202543 R 235279 CDS NP_860770.1 32266738 1492927 complement(1203424..1204170) 1 NC_004917.1 similar to Campylobacter jejuni CJ0128c; predicted extragenic suppressor protein SuhB; hypothetical protein 1204170 suhB 1492927 suhB Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860770.1 1203424 R 235279 CDS NP_860771.1 32266739 1492928 1204239..1204865 1 NC_004917.1 similar to Helicobacter pylori HP0951; recombination protein RecO 1204865 1492928 HH1240 Helicobacter hepaticus ATCC 51449 recombination protein RecO NP_860771.1 1204239 D 235279 CDS NP_860772.1 32266740 1492929 1204978..1206330 1 NC_004917.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; glutamate dehydrogenase 1206330 gdhA 1492929 gdhA Helicobacter hepaticus ATCC 51449 glutamate dehydrogenase NP_860772.1 1204978 D 235279 CDS NP_860773.1 32266741 1492930 complement(1206415..1207467) 1 NC_004917.1 A/G-specific adenine glycosylase 1207467 mutY 1492930 mutY Helicobacter hepaticus ATCC 51449 A/G-specific adenine glycosylase NP_860773.1 1206415 R 235279 CDS NP_860774.1 32266742 1492931 1207616..1208821 1 NC_004917.1 NADH dehydrogenase Ndh 1208821 ndh 1492931 ndh Helicobacter hepaticus ATCC 51449 NADH dehydrogenase Ndh NP_860774.1 1207616 D 235279 CDS NP_860775.1 32266743 1492932 1209054..1209737 1 NC_004917.1 adenine-specific DNA methylase 1209737 1492932 HH1244 Helicobacter hepaticus ATCC 51449 adenine-specific DNA methylase NP_860775.1 1209054 D 235279 CDS NP_860776.1 32266744 1492933 1209808..1210815 1 NC_004917.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; phosphoribosylaminoimidazole synthetase 1210815 purM 1492933 purM Helicobacter hepaticus ATCC 51449 phosphoribosylaminoimidazole synthetase NP_860776.1 1209808 D 235279 CDS NP_860777.1 32266745 1492934 1210831..1211622 1 NC_004917.1 predicted secreted protein; hypothetical protein 1211622 1492934 HH1246 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860777.1 1210831 D 235279 CDS NP_860778.1 32266746 1492935 1211625..1212431 1 NC_004917.1 AroE; catalyzes the conversion of shikimate to 3-dehydroshikimate; shikimate 5-dehydrogenase 1212431 aroE 1492935 aroE Helicobacter hepaticus ATCC 51449 shikimate 5-dehydrogenase NP_860778.1 1211625 D 235279 CDS NP_860779.1 32266747 1492936 1212487..1212765 1 NC_004917.1 allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases; reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp-tRNA(Asn) or phospho-Glu-tRNA; some Mycoplasma proteins contain an N-terminal fusion to an unknown domain; aspartyl/glutamyl-tRNA amidotransferase subunit C 1212765 gatC 1492936 gatC Helicobacter hepaticus ATCC 51449 aspartyl/glutamyl-tRNA amidotransferase subunit C NP_860779.1 1212487 D 235279 CDS NP_860780.1 32266748 1492937 1212762..1213469 1 NC_004917.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; uracil-DNA glycosylase 1213469 ung 1492937 ung Helicobacter hepaticus ATCC 51449 uracil-DNA glycosylase NP_860780.1 1212762 D 235279 CDS NP_860781.1 32266749 1492938 complement(1213476..1215173) 1 NC_004917.1 glutathione-regulated potassium-efflux system protein KefB 1215173 kefB_2 1492938 kefB_2 Helicobacter hepaticus ATCC 51449 glutathione-regulated potassium-efflux system protein KefB NP_860781.1 1213476 R 235279 CDS NP_860782.1 32266750 1492939 1215345..1216604 1 NC_004917.1 similar to Campylobacter jejuni CJ0846; predicted membrane-associated; hypothetical protein 1216604 1492939 HH1251 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860782.1 1215345 D 235279 CDS NP_860783.1 32266751 1492940 1216753..1217451 1 NC_004917.1 similar to Campylobacter jejuni CJ0343c; predicted membrane-associated; hypothetical protein 1217451 1492940 HH1252 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860783.1 1216753 D 235279 CDS NP_860784.1 32266752 1492941 complement(1217538..1217687) 1 NC_004917.1 hypothetical protein 1217687 1492941 HH1253 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860784.1 1217538 R 235279 CDS NP_860785.1 32266753 1492942 1217707..1218495 1 NC_004917.1 similar to Campylobacter jejuni CJ1613c; hypothetical protein 1218495 1492942 HH1254 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860785.1 1217707 D 235279 CDS NP_860786.1 32266754 1492943 1218550..1219821 1 NC_004917.1 similar to Helicobacter pylori HP0728; predicted PP-loop superfamily ATPase; hypothetical protein 1219821 1492943 HH1255 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860786.1 1218550 D 235279 CDS NP_860787.1 32266755 1492944 1219927..1221390 1 NC_004917.1 CcoN; FixN; cbb3-type cytochrome c oxidase subunit I 1221390 fixN 1492944 fixN Helicobacter hepaticus ATCC 51449 cbb3-type cytochrome c oxidase subunit I NP_860787.1 1219927 D 235279 CDS NP_860788.1 32266756 1492945 1221406..1222146 1 NC_004917.1 CcoO; FixO; cbb3-type cytochrome c oxidase subunit II 1222146 fixO 1492945 fixO Helicobacter hepaticus ATCC 51449 cbb3-type cytochrome c oxidase subunit II NP_860788.1 1221406 D 235279 CDS NP_860789.1 32266757 1492946 1222143..1222373 1 NC_004917.1 cb-type cytochrome C oxidase subunit IV 1222373 fixQ 1492946 fixQ Helicobacter hepaticus ATCC 51449 cb-type cytochrome C oxidase subunit IV NP_860789.1 1222143 D 235279 CDS NP_860790.1 32266758 1492947 1222370..1223242 1 NC_004917.1 cb-type cytochrome C oxidase subunit III 1223242 fixP 1492947 fixP Helicobacter hepaticus ATCC 51449 cb-type cytochrome C oxidase subunit III NP_860790.1 1222370 D 235279 CDS NP_860791.1 32266759 1492948 1223254..1223454 1 NC_004917.1 similar to Campylobacter jejuni periplasmic protein; hypothetical protein 1223454 1492948 HH1260 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860791.1 1223254 D 235279 CDS NP_860792.1 32266760 1492949 1223464..1223571 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1223571 1492949 HH1261 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860792.1 1223464 D 235279 CDS NP_860793.1 32266761 1492950 1223575..1224249 1 NC_004917.1 similar to Helicobacter pylori HP0149; predicted secreted protein; hypothetical protein 1224249 1492950 HH1262 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860793.1 1223575 D 235279 CDS NP_860794.1 32266762 1492951 1224266..1224898 1 NC_004917.1 predicted secreted protein; hypothetical protein 1224898 1492951 HH1263 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860794.1 1224266 D 235279 CDS NP_860795.1 32266763 1492952 1224908..1225207 1 NC_004917.1 predicted secreted protein; hypothetical protein 1225207 1492952 HH1264 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860795.1 1224908 D 235279 CDS NP_860796.1 32266764 1492953 1225207..1225971 1 NC_004917.1 hypothetical protein 1225971 1492953 HH1265 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860796.1 1225207 D 235279 CDS NP_860797.1 32266765 1492954 1226034..1226378 1 NC_004917.1 hypothetical protein 1226378 1492954 HH1266 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860797.1 1226034 D 235279 CDS NP_860798.1 32266766 1492955 1226460..1227650 1 NC_004917.1 similar to Campylobacter jejuni CJ1687; predicted efflux protein; hypothetical protein 1227650 1492955 HH1267 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860798.1 1226460 D 235279 CDS NP_860799.1 32266767 1492956 complement(1227662..1230562) 1 NC_004917.1 similar to Helicobacter pylori HP1222; predicted D-lactate dehydrogenase Dld; hypothetical protein 1230562 dld 1492956 dld Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860799.1 1227662 R 235279 CDS NP_860800.1 32266768 1492957 complement(1230614..1231030) 1 NC_004917.1 similar to Campylobacter jejuni CJ0950c; predicted secreted protein; hypothetical protein 1231030 1492957 HH1269 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860800.1 1230614 R 235279 CDS NP_860801.1 32266769 1492958 complement(1231084..1234740) 1 NC_004917.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; DNA polymerase III subunit alpha 1234740 dnaE 1492958 dnaE Helicobacter hepaticus ATCC 51449 DNA polymerase III subunit alpha NP_860801.1 1231084 R 235279 CDS NP_860802.1 32266770 1492959 1234897..1236300 1 NC_004917.1 predicted secreted protein; hypothetical protein 1236300 1492959 HH1271 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860802.1 1234897 D 235279 CDS NP_860803.1 32266771 1492960 complement(1236297..1237424) 1 NC_004917.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; transcription elongation factor NusA 1237424 nusA 1492960 nusA Helicobacter hepaticus ATCC 51449 transcription elongation factor NusA NP_860803.1 1236297 R 235279 CDS NP_860804.1 32266772 1492961 1237600..1237860 1 NC_004917.1 similar to Campylobacter jejuni CJ0459c; hypothetical protein 1237860 1492961 HH1273 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860804.1 1237600 D 235279 CDS NP_860805.1 32266773 1492962 1237945..1239276 1 NC_004917.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); (dimethylallyl)adenosine tRNA methylthiotransferase 1239276 1492962 HH1274 Helicobacter hepaticus ATCC 51449 (dimethylallyl)adenosine tRNA methylthiotransferase NP_860805.1 1237945 D 235279 CDS NP_860806.1 32266774 1492963 1239270..1239914 1 NC_004917.1 similar to Helicobacter pylori HP0270; hypothetical protein 1239914 1492963 HH1275 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860806.1 1239270 D 235279 CDS NP_860807.1 32266775 1492964 1239977..1241017 1 NC_004917.1 hypothetical protein 1241017 1492964 HH1276 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860807.1 1239977 D 235279 CDS NP_860808.1 32266776 1492965 1241021..1241569 1 NC_004917.1 similar to Helicobacter pylori HP0272; predicted secreted protein; hypothetical protein 1241569 1492965 HH1277 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860808.1 1241021 D 235279 CDS NP_860809.1 32266777 1492966 1241562..1242143 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1242143 1492966 HH1278 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860809.1 1241562 D 235279 CDS NP_860810.1 32266778 1492967 1242153..1243106 1 NC_004917.1 similar to Helicobacter pylori HP0707; S-adenosyl-methyltransferase MraW 1243106 mraW 1492967 mraW Helicobacter hepaticus ATCC 51449 S-adenosyl-methyltransferase MraW NP_860810.1 1242153 D 235279 CDS NP_860811.1 32266779 1492968 1243107..1243475 1 NC_004917.1 similar to Campylobacter jejuni CJ0692c; predicted membrane-associated; hypothetical protein 1243475 1492968 HH1280 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860811.1 1243107 D 235279 CDS NP_860812.1 32266780 1492969 1243550..1243648 1 NC_004917.1 hypothetical protein 1243648 1492969 HH1281 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860812.1 1243550 D 235279 CDS NP_860813.2 161546625 1492970 1243745..1244680 1 NC_004917.1 ACP S-malonyltransferase 1244680 fabD 1492970 fabD Helicobacter hepaticus ATCC 51449 ACP S-malonyltransferase NP_860813.2 1243745 D 235279 CDS NP_860814.1 32266782 1492971 1244695..1245393 1 NC_004917.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1245393 1492971 HH1283 Helicobacter hepaticus ATCC 51449 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase NP_860814.1 1244695 D 235279 CDS NP_860815.1 32266783 1492972 1245405..1245923 1 NC_004917.1 similar to Campylobacter jejuni CJ1002c; hypothetical protein 1245923 1492972 HH1284 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860815.1 1245405 D 235279 CDS NP_860816.1 32266784 1492973 1245933..1246403 1 NC_004917.1 similar to Neisseria meningitidis pilin PilE; hypothetical protein 1246403 1492973 HH1285 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860816.1 1245933 D 235279 CDS NP_860817.1 32266785 1492974 complement(1246804..1247655) 1 NC_004917.1 similar to Campylobacter jejuni CJ1467; hypothetical protein 1247655 1492974 HH1286 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860817.1 1246804 R 235279 CDS NP_860818.1 32266786 1492975 1247726..1249081 1 NC_004917.1 similar to Helicobacter pylori HP1489; predicted secreted protein; hypothetical protein 1249081 1492975 HH1287 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860818.1 1247726 D 235279 CDS NP_860819.1 32266787 1492976 1249103..1250077 1 NC_004917.1 similar to Helicobacter pylori HP1488; predicted secreted protein; hypothetical protein 1250077 1492976 HH1288 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860819.1 1249103 D 235279 CDS NP_860820.1 32266788 1492977 1250147..1250335 1 NC_004917.1 required for 70S ribosome assembly; 50S ribosomal protein L28 1250335 rpmB 1492977 rpmB Helicobacter hepaticus ATCC 51449 50S ribosomal protein L28 NP_860820.1 1250147 D 235279 CDS NP_860821.1 32266789 1492978 1250353..1251480 1 NC_004917.1 similar to Helicobacter pylori HP0490; predicted potassium channel; hypothetical protein 1251480 1492978 HH1290 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860821.1 1250353 D 235279 CDS NP_860822.1 32266790 1492979 1251473..1252687 1 NC_004917.1 bifunctional arginine biosynthesis protein ArgJ; functions at the 1st and 5th steps in arginine biosynthesis; involved in synthesis of acetylglutamate from glutamate and acetyl-CoA and ornithine by transacetylation between acetylornithine and glutmate; bifunctional ornithine acetyltransferase/N-acetylglutamate synthase 1252687 argJ 1492979 argJ Helicobacter hepaticus ATCC 51449 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase NP_860822.1 1251473 D 235279 CDS NP_860823.1 32266791 1492980 1252803..1253024 1 NC_004917.1 hypothetical protein 1253024 1492980 HH1292 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860823.1 1252803 D 235279 CDS NP_860824.1 32266792 1492981 1253203..1253328 1 NC_004917.1 hypothetical protein 1253328 1492981 HH1293 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860824.1 1253203 D 235279 CDS NP_860825.1 32266793 1492982 complement(1253514..1254881) 1 NC_004917.1 fibronectin/fibrinogen-binding protein 1254881 1492982 HH1294 Helicobacter hepaticus ATCC 51449 fibronectin/fibrinogen-binding protein NP_860825.1 1253514 R 235279 CDS NP_860826.1 32266794 1492983 complement(1254904..1256445) 1 NC_004917.1 DNA repair protein RecN 1256445 recN 1492983 recN Helicobacter hepaticus ATCC 51449 DNA repair protein RecN NP_860826.1 1254904 R 235279 CDS NP_860827.1 32266795 1492984 complement(1256460..1257365) 1 NC_004917.1 possible kinase; hypothetical protein 1257365 1492984 HH1296 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860827.1 1256460 R 235279 CDS NP_860828.1 32266796 1492985 complement(1257374..1257982) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1257982 1492985 HH1297 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860828.1 1257374 R 235279 CDS NP_860829.1 32266797 1492986 1258222..1259448 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein; inner membrane protein 1259448 1492986 HH1298 Helicobacter hepaticus ATCC 51449 inner membrane protein NP_860829.1 1258222 D 235279 CDS NP_860830.1 32266798 1492987 1259460..1259699 1 NC_004917.1 similar to Campylobacter jejuni CJ1501; hypothetical protein 1259699 1492987 HH1299 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860830.1 1259460 D 235279 CDS NP_860831.1 32266799 1492988 1259771..1259893 1 NC_004917.1 hypothetical protein 1259893 1492988 HH1300 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860831.1 1259771 D 235279 CDS NP_860832.1 32266800 1492989 1259972..1260490 1 NC_004917.1 hypothetical protein 1260490 1492989 HH1301 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860832.1 1259972 D 235279 CDS NP_860833.1 32266801 1492990 1260715..1261971 1 NC_004917.1 hypothetical protein 1261971 1492990 HH1302 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860833.1 1260715 D 235279 CDS NP_860834.1 32266802 1492991 1262036..1262218 1 NC_004917.1 hypothetical protein 1262218 1492991 HH1303 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860834.1 1262036 D 235279 CDS NP_860835.1 32266803 1492992 1262296..1262907 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1262907 1492992 HH1304 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860835.1 1262296 D 235279 CDS NP_860836.1 32266804 1492993 complement(1262964..1264160) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1264160 1492993 HH1305 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860836.1 1262964 R 235279 CDS NP_860837.1 32266805 1492994 complement(1264183..1265091) 1 NC_004917.1 similar to Helicobacter pylori HP1336; hypothetical protein 1265091 1492994 HH1306 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860837.1 1264183 R 235279 CDS NP_860838.1 32266806 1492995 complement(1265215..1265691) 1 NC_004917.1 similar to Archaeoglobus fulgidus AF2335; hypothetical protein 1265691 1492995 HH1307 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860838.1 1265215 R 235279 CDS NP_860839.1 32266807 1492996 complement(1265773..1266978) 1 NC_004917.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; acetate kinase 1266978 ackA 1492996 ackA Helicobacter hepaticus ATCC 51449 acetate kinase NP_860839.1 1265773 R 235279 CDS NP_860840.1 32266808 1492997 complement(1266998..1267993) 1 NC_004917.1 phosphotransacetylase 1267993 pta 1492997 pta Helicobacter hepaticus ATCC 51449 phosphotransacetylase NP_860840.1 1266998 R 235279 CDS NP_860841.1 32266809 1492998 complement(1268185..1270191) 1 NC_004917.1 methyl-accepting chemotaxis protein 1270191 1492998 HH1310 Helicobacter hepaticus ATCC 51449 methyl-accepting chemotaxis protein NP_860841.1 1268185 R 235279 CDS NP_860842.1 32266810 1492999 complement(1270285..1271631) 1 NC_004917.1 similar to Campylobacter jejuni CJ1454c; hypothetical protein 1271631 1492999 HH1311 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860842.1 1270285 R 235279 CDS NP_860843.1 32266811 1493000 1271792..1272385 1 NC_004917.1 predicted secreted protein; hypothetical protein 1272385 1493000 HH1312 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860843.1 1271792 D 235279 CDS NP_860844.1 32266812 1493001 complement(1272382..1273212) 1 NC_004917.1 Catalyzes a key regulatory step in fatty acid biosynthesis; enoyl-ACP reductase 1273212 1493001 HH1313 Helicobacter hepaticus ATCC 51449 enoyl-ACP reductase NP_860844.1 1272382 R 235279 CDS NP_860845.1 32266813 1493002 1273345..1273731 1 NC_004917.1 predicted secreted protein; hypothetical protein 1273731 1493002 HH1314 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860845.1 1273345 D 235279 CDS NP_860846.1 32266814 1493003 complement(1273743..1274450) 1 NC_004917.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; triosephosphate isomerase 1274450 tpiA 1493003 tpiA Helicobacter hepaticus ATCC 51449 triosephosphate isomerase NP_860846.1 1273743 R 235279 CDS NP_860847.1 32266815 1493004 1274627..1275688 1 NC_004917.1 cytochrome c551 peroxidase 1275688 yhjA 1493004 yhjA Helicobacter hepaticus ATCC 51449 cytochrome c551 peroxidase NP_860847.1 1274627 D 235279 CDS NP_860848.1 32266816 1493005 1275810..1278548 1 NC_004917.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; DNA polymerase I 1278548 polA 1493005 polA Helicobacter hepaticus ATCC 51449 DNA polymerase I NP_860848.1 1275810 D 235279 CDS NP_860849.1 32266817 1493006 1278675..1278980 1 NC_004917.1 hypothetical protein 1278980 1493006 HH1318 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860849.1 1278675 D 235279 CDS NP_860850.1 32266818 1493007 complement(1279260..1280435) 1 NC_004917.1 similar to Helicobacter pylori HP1487; predicted membrane-associated; hypothetical protein 1280435 1493007 HH1319 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860850.1 1279260 R 235279 CDS NP_860851.1 32266819 1493008 complement(1280432..1280710) 1 NC_004917.1 similar to Helicobacter pylori HP1575 (FlhB2); flagellar basal body protein FlhB 1280710 flhB_2 1493008 flhB_2 Helicobacter hepaticus ATCC 51449 flagellar basal body protein FlhB NP_860851.1 1280432 R 235279 CDS NP_860852.1 32266820 1493009 complement(1280719..1281357) 1 NC_004917.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; riboflavin synthase subunit alpha 1281357 ribC 1493009 ribC Helicobacter hepaticus ATCC 51449 riboflavin synthase subunit alpha NP_860852.1 1280719 R 235279 CDS NP_860853.1 32266821 1493010 1281447..1282244 1 NC_004917.1 hypothetical protein 1282244 1493010 HH1322 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860853.1 1281447 D 235279 CDS NP_860854.1 32266822 1493011 1282265..1283389 1 NC_004917.1 similar to Helicobacter pylori HP1572; possibly regulatory protein DniR; hypothetical protein 1283389 dniR 1493011 dniR Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860854.1 1282265 D 235279 CDS NP_860855.1 32266823 1493012 1283404..1284300 1 NC_004917.1 rare lipoprotein A 1284300 rlpA 1493012 rlpA Helicobacter hepaticus ATCC 51449 rare lipoprotein A NP_860855.1 1283404 D 235279 CDS NP_860856.1 32266824 1493013 1284326..1284937 1 NC_004917.1 catalyzes the dehydration of D-erythro-1-(imidazol-4-yl)glycerol 3-phosphate to 3-(imidazol-4-yl)-2-oxopropyl phosphate in histidine biosynthesis; imidazoleglycerol-phosphate dehydratase 1284937 hisB 1493013 hisB Helicobacter hepaticus ATCC 51449 imidazoleglycerol-phosphate dehydratase NP_860856.1 1284326 D 235279 CDS NP_860857.1 32266825 1493014 1284934..1285428 1 NC_004917.1 similar to Helicobacter pylori HP1570; hypothetical protein 1285428 1493014 HH1326 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860857.1 1284934 D 235279 CDS NP_860858.1 32266826 1493015 1285394..1285942 1 NC_004917.1 predicted secreted protein; hypothetical protein 1285942 1493015 HH1327 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860858.1 1285394 D 235279 CDS NP_860859.1 32266827 1493016 1285942..1286412 1 NC_004917.1 similar to Helicobacter pylori HP1568; predicted membrane-associated; hypothetical protein 1286412 1493016 HH1328 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860859.1 1285942 D 235279 CDS NP_860860.1 32266828 1493017 1286457..1287125 1 NC_004917.1 binds guanine nucleotides; in Escherichia coli depletion results in defective cell division and filamentation; in Bacillus subtilis this gene is essential; ribosome biogenesis GTP-binding protein YsxC 1287125 engB 1493017 engB Helicobacter hepaticus ATCC 51449 ribosome biogenesis GTP-binding protein YsxC NP_860860.1 1286457 D 235279 CDS NP_860861.1 32266829 1493018 1287115..1287585 1 NC_004917.1 catalyzes the formation of N-acetyl-L-glutamate from acetyl-CoA and L-glutamate; acetyltransferase 1287585 1493018 HH1330 Helicobacter hepaticus ATCC 51449 acetyltransferase NP_860861.1 1287115 D 235279 CDS NP_860862.1 32266830 1493019 1287549..1288001 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1288001 1493019 HH1331 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860862.1 1287549 D 235279 CDS NP_860863.1 32266831 1493020 1287998..1289785 1 NC_004917.1 penicillin-binding protein 1289785 1493020 HH1332 Helicobacter hepaticus ATCC 51449 penicillin-binding protein NP_860863.1 1287998 D 235279 CDS NP_860864.1 32266832 1493021 1289800..1290798 1 NC_004917.1 flagellar glycosylation protein FlmA 1290798 flmA 1493021 flmA Helicobacter hepaticus ATCC 51449 flagellar glycosylation protein FlmA NP_860864.1 1289800 D 235279 CDS NP_860865.1 32266833 1493022 1290872..1291366 1 NC_004917.1 ferritin 1291366 1493022 HH1334 Helicobacter hepaticus ATCC 51449 ferritin NP_860865.1 1290872 D 235279 CDS NP_860866.1 32266834 1493023 1291455..1292696 1 NC_004917.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase 1292696 dfp 1493023 dfp Helicobacter hepaticus ATCC 51449 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase NP_860866.1 1291455 D 235279 CDS NP_860867.1 32266835 1493024 1292693..1293424 1 NC_004917.1 similar to Helicobacter pylori HP0842; hypothetical protein 1293424 1493024 HH1336 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860867.1 1292693 D 235279 CDS NP_860868.1 32266836 1493025 complement(1293458..1295563) 1 NC_004917.1 similar to Campylobacter jejuni MCP-type signal transduction protein CJ1506c; hypothetical protein 1295563 1493025 HH1337 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860868.1 1293458 R 235279 CDS NP_860869.1 32266837 1493026 complement(1295666..1296043) 1 NC_004917.1 similar to Campylobacter jejuni CJ0977; hypothetical protein 1296043 1493026 HH1338 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860869.1 1295666 R 235279 CDS NP_860870.1 32266838 1493027 1296081..1296179 1 NC_004917.1 hypothetical protein 1296179 1493027 HH1339 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860870.1 1296081 D 235279 CDS NP_860871.1 32266839 1493028 complement(1296137..1297084) 1 NC_004917.1 similar to Campylobacter jejuni CJ0976; predicted methyltransferase; hypothetical protein 1297084 1493028 HH1340 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860871.1 1296137 R 235279 CDS NP_860872.1 32266840 1493029 complement(1297062..1298105) 1 NC_004917.1 similar to Helicobacter pylori HP0418; hypothetical protein 1298105 1493029 HH1341 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860872.1 1297062 R 235279 CDS NP_860873.1 32266841 1493030 complement(1298124..1300055) 1 NC_004917.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; methionyl-tRNA synthetase 1300055 metG 1493030 metG Helicobacter hepaticus ATCC 51449 methionyl-tRNA synthetase NP_860873.1 1298124 R 235279 CDS NP_860874.1 32266842 1493031 complement(1300075..1300275) 1 NC_004917.1 similar to Helicobacter pylori HP1384; hypothetical protein 1300275 1493031 HH1343 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860874.1 1300075 R 235279 CDS NP_860875.1 32266843 1493032 complement(1300268..1301107) 1 NC_004917.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; fructose-1,6-bisphosphatase 1301107 fbp 1493032 fbp Helicobacter hepaticus ATCC 51449 fructose-1,6-bisphosphatase NP_860875.1 1300268 R 235279 CDS NP_860876.1 32266844 1493033 complement(1301155..1301850) 1 NC_004917.1 hypothetical protein 1301850 1493033 HH1345 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860876.1 1301155 R 235279 CDS NP_860877.1 32266845 1493034 1301932..1302582 1 NC_004917.1 catalyzes the interconversion of D-ribulose 5-phosphate to xylulose 5-phosphate; ribulose-phosphate 3-epimerase 1302582 rpe 1493034 rpe Helicobacter hepaticus ATCC 51449 ribulose-phosphate 3-epimerase NP_860877.1 1301932 D 235279 CDS NP_860878.1 32266846 1493035 1302588..1303388 1 NC_004917.1 3'-5' exonuclease of DNA polymerase III; DNA polymerase III subunit epsilon 1303388 dnaQ 1493035 dnaQ Helicobacter hepaticus ATCC 51449 DNA polymerase III subunit epsilon NP_860878.1 1302588 D 235279 CDS NP_860879.1 32266847 1493036 complement(1303366..1304205) 1 NC_004917.1 DNA methylase HemK 1304205 hemK 1493036 hemK Helicobacter hepaticus ATCC 51449 DNA methylase HemK NP_860879.1 1303366 R 235279 CDS NP_860880.1 32266848 1493037 complement(1304195..1305421) 1 NC_004917.1 zinc-metallo protease 1305421 1493037 HH1349 Helicobacter hepaticus ATCC 51449 zinc-metallo protease NP_860880.1 1304195 R 235279 CDS NP_860881.1 32266849 1493038 1305554..1307176 1 NC_004917.1 CTP synthase; CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; CTP synthetase 1307176 pyrG 1493038 pyrG Helicobacter hepaticus ATCC 51449 CTP synthetase NP_860881.1 1305554 D 235279 CDS NP_860882.1 32266850 1493039 1307193..1308761 1 NC_004917.1 single-stranded DNA-specific exonuclease 1308761 recJ 1493039 recJ Helicobacter hepaticus ATCC 51449 single-stranded DNA-specific exonuclease NP_860882.1 1307193 D 235279 CDS NP_860883.1 32266851 1493040 complement(1308775..1309554) 1 NC_004917.1 similar to Campylobacter jejuni CJ1056c; hypothetical protein 1309554 1493040 HH1352 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860883.1 1308775 R 235279 CDS NP_860884.1 32266852 1493041 1309759..1311090 1 NC_004917.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; adenylosuccinate lyase 1311090 purB 1493041 purB Helicobacter hepaticus ATCC 51449 adenylosuccinate lyase NP_860884.1 1309759 D 235279 CDS NP_860885.1 32266853 1493042 complement(1311068..1311646) 1 NC_004917.1 similar to Helicobacter pylori conserved hypothetical mitochondrial protein 4; hypothetical protein 1311646 1493042 HH1354 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860885.1 1311068 R 235279 CDS NP_860886.1 32266854 1493043 complement(1311652..1312266) 1 NC_004917.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; orotate phosphoribosyltransferase 1312266 pyrE 1493043 pyrE Helicobacter hepaticus ATCC 51449 orotate phosphoribosyltransferase NP_860886.1 1311652 R 235279 CDS NP_860887.1 32266855 1493044 complement(1312281..1312961) 1 NC_004917.1 hypothetical protein 1312961 1493044 HH1356 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860887.1 1312281 R 235279 CDS NP_860888.1 32266856 1493045 1313105..1313611 1 NC_004917.1 similar to Helicobacter pylori HP1028; predicted secreted protein; hypothetical protein 1313611 1493045 HH1357 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860888.1 1313105 D 235279 CDS NP_860889.1 32266857 1493046 1313613..1315727 1 NC_004917.1 DNA helicase II 1315727 1493046 HH1358 Helicobacter hepaticus ATCC 51449 DNA helicase II NP_860889.1 1313613 D 235279 CDS NP_860890.1 32266858 1493047 1315724..1316641 1 NC_004917.1 required for the assembly of the flagellar basal body P-ring; flagellar basal body P-ring biosynthesis protein FlgA 1316641 flgA 1493047 flgA Helicobacter hepaticus ATCC 51449 flagellar basal body P-ring biosynthesis protein FlgA NP_860890.1 1315724 D 235279 CDS NP_860891.1 32266859 1493048 1316695..1317288 1 NC_004917.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1317288 ubiD 1493048 ubiD Helicobacter hepaticus ATCC 51449 3-octaprenyl-4-hydroxybenzoate carboxy-lyase NP_860891.1 1316695 D 235279 CDS NP_860892.1 32266860 1493049 1317288..1317785 1 NC_004917.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; phosphopantetheine adenylyltransferase 1317785 coaD 1493049 coaD Helicobacter hepaticus ATCC 51449 phosphopantetheine adenylyltransferase NP_860892.1 1317288 D 235279 CDS NP_860893.1 32266861 1493050 1317785..1318372 1 NC_004917.1 catalyzes the reversible phosphoryl transfer from adenosine triphosphate (ATP) to thymidine monophosphate (dTMP) to form thymidine diphosphate (dTDP); thymidylate kinase 1318372 tmk 1493050 tmk Helicobacter hepaticus ATCC 51449 thymidylate kinase NP_860893.1 1317785 D 235279 CDS NP_860894.1 32266862 1493051 1318376..1318987 1 NC_004917.1 hypothetical protein 1318987 1493051 HH1363 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860894.1 1318376 D 235279 CDS NP_860895.1 32266863 1493052 1319075..1320601 1 NC_004917.1 FlaA; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin A 1320601 flaA_1 1493052 flaA_1 Helicobacter hepaticus ATCC 51449 flagellin A NP_860895.1 1319075 D 235279 CDS NP_860896.1 32266864 1493053 complement(1320660..1320986) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1320986 1493053 HH1365 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860896.1 1320660 R 235279 CDS NP_860897.1 32266865 1493054 1321061..1321921 1 NC_004917.1 catalyzes the formation of 5,10-methenyltetrahydrofolate from 5,10-methylenetetrahydrofolate and subsequent formation of 10-formyltetrahydrofolate from 5,10-methenyltetrahydrofolate; bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase 1321921 folD 1493054 folD Helicobacter hepaticus ATCC 51449 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase NP_860897.1 1321061 D 235279 CDS NP_860898.1 32266866 1493055 1321918..1322931 1 NC_004917.1 signal peptidase I 1322931 lepB 1493055 lepB Helicobacter hepaticus ATCC 51449 signal peptidase I NP_860898.1 1321918 D 235279 CDS NP_860899.1 32266867 1493056 1322943..1323386 1 NC_004917.1 catalyzes the interconversion of ribose 5-phosphate to ribulose 5-phosphate; enzyme from E. coli shows allose 6-phosphate isomerase activity; ribose-5-phosphate isomerase B 1323386 rpiB 1493056 rpiB Helicobacter hepaticus ATCC 51449 ribose-5-phosphate isomerase B NP_860899.1 1322943 D 235279 CDS NP_860900.1 32266868 1493057 1323402..1323755 1 NC_004917.1 similar to Campylobacter jejuni membrane protein; hypothetical protein 1323755 1493057 HH1369 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860900.1 1323402 D 235279 CDS NP_860901.1 32266869 1493058 1323783..1324319 1 NC_004917.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; adenine phosphoribosyltransferase 1324319 apt 1493058 apt Helicobacter hepaticus ATCC 51449 adenine phosphoribosyltransferase NP_860901.1 1323783 D 235279 CDS NP_860902.1 32266870 1493059 1324319..1325080 1 NC_004917.1 similar to Helicobacter pylori HP0571; predicted membrane-associated; hypothetical protein 1325080 1493059 HH1371 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860902.1 1324319 D 235279 CDS NP_860903.1 32266871 1493060 1325120..1326544 1 NC_004917.1 catalyzes the removal of N-terminal amino acids preferably leucine from various peptides; leucyl aminopeptidase 1326544 pepA 1493060 pepA Helicobacter hepaticus ATCC 51449 leucyl aminopeptidase NP_860903.1 1325120 D 235279 CDS NP_860904.1 32266872 1493061 1326545..1327645 1 NC_004917.1 translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; GTP-dependent nucleic acid-binding protein EngD 1327645 1493061 HH1373 Helicobacter hepaticus ATCC 51449 GTP-dependent nucleic acid-binding protein EngD NP_860904.1 1326545 D 235279 CDS NP_860905.1 32266873 1493062 complement(1327841..1328068) 1 NC_004917.1 hypothetical protein 1328068 1493062 HH1374 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860905.1 1327841 R 235279 CDS NP_860906.1 32266874 1493063 complement(1328065..1328511) 1 NC_004917.1 hypothetical protein 1328511 1493063 HH1375 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860906.1 1328065 R 235279 CDS NP_860907.1 32266875 1493064 complement(1328508..1329365) 1 NC_004917.1 hypothetical protein 1329365 1493064 HH1376 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860907.1 1328508 R 235279 CDS NP_860908.1 32266876 1493065 1329706..1330017 1 NC_004917.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; 30S ribosomal protein S10 1330017 rpsJ 1493065 rpsJ Helicobacter hepaticus ATCC 51449 30S ribosomal protein S10 NP_860908.1 1329706 D 235279 CDS NP_860909.2 161546624 1493066 1330073..1330651 1 NC_004917.1 binds directly near the 3' end of the 23S rRNA, where it nucleates assembly of the 50S subunit; essential for peptidyltransferase activity; mutations in this gene confer resistance to tiamulin; 50S ribosomal protein L3 1330651 rplC 1493066 rplC Helicobacter hepaticus ATCC 51449 50S ribosomal protein L3 NP_860909.2 1330073 D 235279 CDS NP_860910.1 32266878 1493067 1330663..1331286 1 NC_004917.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; 50S ribosomal protein L4 1331286 rplD 1493067 rplD Helicobacter hepaticus ATCC 51449 50S ribosomal protein L4 NP_860910.1 1330663 D 235279 CDS NP_860911.1 32266879 1493068 1331287..1331568 1 NC_004917.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; 50S ribosomal protein L23 1331568 rplW 1493068 rplW Helicobacter hepaticus ATCC 51449 50S ribosomal protein L23 NP_860911.1 1331287 D 235279 CDS NP_860912.1 32266880 1493069 1331578..1332405 1 NC_004917.1 one of the primary rRNA-binding proteins; required for association of the 30S and 50S subunits to form the 70S ribosome, for tRNA binding and peptide bond formation; 50S ribosomal protein L2 1332405 rplB 1493069 rplB Helicobacter hepaticus ATCC 51449 50S ribosomal protein L2 NP_860912.1 1331578 D 235279 CDS NP_860913.1 32266881 1493070 1332416..1332697 1 NC_004917.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; 30S ribosomal protein S19 1332697 rpsS 1493070 rpsS Helicobacter hepaticus ATCC 51449 30S ribosomal protein S19 NP_860913.1 1332416 D 235279 CDS NP_860914.1 32266882 1493071 1332707..1333279 1 NC_004917.1 binds specifically to 23S rRNA during the early stages of 50S assembly; makes contact with all 6 domains of the 23S rRNA in the assembled 50S subunit and ribosome; mutations in this gene result in erythromycin resistance; located near peptidyl-transferase center; 50S ribosomal protein L22 1333279 rplV 1493071 rplV Helicobacter hepaticus ATCC 51449 50S ribosomal protein L22 NP_860914.1 1332707 D 235279 CDS NP_860915.1 32266883 1493072 1333282..1333992 1 NC_004917.1 forms a complex with S10 and S14; binds the lower part of the 30S subunit head and the mRNA in the complete ribosome to position it for translation; 30S ribosomal protein S3 1333992 rpsC 1493072 rpsC Helicobacter hepaticus ATCC 51449 30S ribosomal protein S3 NP_860915.1 1333282 D 235279 CDS NP_860916.1 32266884 1493073 1333996..1334421 1 NC_004917.1 located in the peptidyl transferase center and may be involved in peptidyl transferase activity; similar to archaeal L10e; 50S ribosomal protein L16 1334421 rplP 1493073 rplP Helicobacter hepaticus ATCC 51449 50S ribosomal protein L16 NP_860916.1 1333996 D 235279 CDS NP_860917.1 32266885 1493074 1334408..1334596 1 NC_004917.1 one of the stabilizing components for the large ribosomal subunit; 50S ribosomal protein L29 1334596 rpmC 1493074 rpmC Helicobacter hepaticus ATCC 51449 50S ribosomal protein L29 NP_860917.1 1334408 D 235279 CDS NP_860918.1 32266886 1493075 1334600..1334866 1 NC_004917.1 primary binding protein; helps mediate assembly; involved in translation fidelity; 30S ribosomal protein S17 1334866 rpsQ 1493075 rpsQ Helicobacter hepaticus ATCC 51449 30S ribosomal protein S17 NP_860918.1 1334600 D 235279 CDS NP_860919.1 32266887 1493076 1334863..1335231 1 NC_004917.1 binds to the 23S rRNA between the centers for peptidyl transferase and GTPase; 50S ribosomal protein L14 1335231 rplN 1493076 rplN Helicobacter hepaticus ATCC 51449 50S ribosomal protein L14 NP_860919.1 1334863 D 235279 CDS NP_860920.1 32266888 1493077 1335231..1335467 1 NC_004917.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; 50S ribosomal protein L24 1335467 rplX 1493077 rplX Helicobacter hepaticus ATCC 51449 50S ribosomal protein L24 NP_860920.1 1335231 D 235279 CDS NP_860921.1 32266889 1493078 1335467..1336012 1 NC_004917.1 part of 50S and 5S/L5/L18/L25 subcomplex; contacts 5S rRNA and P site tRNA; forms a bridge to the 30S subunit in the ribosome by binding to S13; 50S ribosomal protein L5 1336012 rplE 1493078 rplE Helicobacter hepaticus ATCC 51449 50S ribosomal protein L5 NP_860921.1 1335467 D 235279 CDS YP_003856774.1 304339520 9711808 1336014..1336199 1 NC_004917.1 30S ribosomal protein S14 1336199 9711808 HH_1900 Helicobacter hepaticus ATCC 51449 30S ribosomal protein S14 YP_003856774.1 1336014 D 235279 CDS NP_860922.1 32266890 1493079 1336033..1336146 1 NC_004917.1 similar to Helicobacter pylori JHP1226; hypothetical protein 1336146 1493079 HH1391 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860922.1 1336033 D 235279 CDS NP_860923.1 32266891 1493080 1336209..1336604 1 NC_004917.1 binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit; 30S ribosomal protein S8 1336604 rpsH 1493080 rpsH Helicobacter hepaticus ATCC 51449 30S ribosomal protein S8 NP_860923.1 1336209 D 235279 CDS NP_860924.1 32266892 1493081 1336614..1337150 1 NC_004917.1 ribosomal protein L6 appears to have arisen as a result of an ancient gene duplication as based on structural comparison of the Bacillus stearothermophilus protein; RNA-binding appears to be in the C-terminal domain; mutations in the L6 gene confer resistance to aminoglycoside antibiotics such as gentamicin and these occur in truncations of the C-terminal domain; it has been localized to a region between the base of the L7/L12 stalk and the central protuberance; 50S ribosomal protein L6 1337150 rplF 1493081 rplF Helicobacter hepaticus ATCC 51449 50S ribosomal protein L6 NP_860924.1 1336614 D 235279 CDS NP_860925.1 32266893 1493082 1337166..1337522 1 NC_004917.1 binds 5S rRNA along with protein L5 and L25; 50S ribosomal protein L18 1337522 rplR 1493082 rplR Helicobacter hepaticus ATCC 51449 50S ribosomal protein L18 NP_860925.1 1337166 D 235279 CDS NP_860926.1 32266894 1493083 1337532..1337972 1 NC_004917.1 located at the back of the 30S subunit body where it stabilizes the conformation of the head with respect to the body; contacts S4 and S8; with S4 and S12 plays a role in translational accuracy; mutations in this gene result in spectinomycin resistance; 30S ribosomal protein S5 1337972 rpsE 1493083 rpsE Helicobacter hepaticus ATCC 51449 30S ribosomal protein S5 NP_860926.1 1337532 D 235279 CDS NP_860927.1 32266895 1493084 1337983..1338384 1 NC_004917.1 late assembly protein; 50S ribosomal protein L15 1338384 rplO 1493084 rplO Helicobacter hepaticus ATCC 51449 50S ribosomal protein L15 NP_860927.1 1337983 D 235279 CDS NP_860928.1 32266896 1493085 1338381..1339631 1 NC_004917.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; preprotein translocase subunit SecY 1339631 secY 1493085 secY Helicobacter hepaticus ATCC 51449 preprotein translocase subunit SecY NP_860928.1 1338381 D 235279 CDS NP_860929.1 32266897 1493086 1339633..1340391 1 NC_004917.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; methionine aminopeptidase 1340391 map 1493086 map Helicobacter hepaticus ATCC 51449 methionine aminopeptidase NP_860929.1 1339633 D 235279 CDS NP_860930.1 32266898 1493087 1340394..1340612 1 NC_004917.1 stimulates the activities of the other two initiation factors, IF-2 and IF-3; translation initiation factor IF-1 1340612 infA 1493087 infA Helicobacter hepaticus ATCC 51449 translation initiation factor IF-1 NP_860930.1 1340394 D 235279 CDS NP_860931.1 32266899 1493088 1340816..1341178 1 NC_004917.1 located at the top of the head of the 30S subunit, it contacts several helices of the 16S rRNA; makes contact with the large subunit via RNA-protein interactions and via protein-protein interactions with L5; contacts P-site tRNA; 30S ribosomal protein S13 1341178 rpsM 1493088 rpsM Helicobacter hepaticus ATCC 51449 30S ribosomal protein S13 NP_860931.1 1340816 D 235279 CDS NP_860932.1 32266900 1493089 1341188..1341580 1 NC_004917.1 located on the platform of the 30S subunit, it bridges several disparate RNA helices of the 16S rRNA; forms part of the Shine-Dalgarno cleft in the 70S ribosome; interacts with S7 and S18 and IF-3; 30S ribosomal protein S11 1341580 rpsK 1493089 rpsK Helicobacter hepaticus ATCC 51449 30S ribosomal protein S11 NP_860932.1 1341188 D 235279 CDS NP_860933.1 32266901 1493090 1341591..1342217 1 NC_004917.1 primary rRNA binding protein; nucleates 30S assembly; involved in translational accuracy with proteins S5 and S12; interacts with protein S5; involved in autogeneously regulating ribosomal proteins by binding to pseudoknot structures in the polycistronic mRNA; interacts with transcription complex and functions similar to protein NusA in antitermination; 30S ribosomal protein S4 1342217 rpsD 1493090 rpsD Helicobacter hepaticus ATCC 51449 30S ribosomal protein S4 NP_860933.1 1341591 D 235279 CDS NP_860934.1 32266902 1493091 1342245..1343249 1 NC_004917.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; DNA-directed RNA polymerase subunit alpha 1343249 rpoA 1493091 rpoA Helicobacter hepaticus ATCC 51449 DNA-directed RNA polymerase subunit alpha NP_860934.1 1342245 D 235279 CDS NP_860935.1 32266903 1493092 1343264..1343614 1 NC_004917.1 is a component of the macrolide binding site in the peptidyl transferase center; 50S ribosomal protein L17 1343614 rplQ 1493092 rplQ Helicobacter hepaticus ATCC 51449 50S ribosomal protein L17 NP_860935.1 1343264 D 235279 CDS NP_860936.1 32266904 1493093 1344048..1345619 1 NC_004917.1 hypothetical protein 1345619 1493093 HH1405 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860936.1 1344048 D 235279 CDS NP_860937.1 32266905 1493094 1345664..1346785 1 NC_004917.1 predicted secreted protein; hypothetical protein 1346785 1493094 HH1406 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860937.1 1345664 D 235279 CDS NP_860938.1 32266906 1493095 1346855..1347289 1 NC_004917.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; flagellar basal-body rod protein FlgB 1347289 flgB 1493095 flgB Helicobacter hepaticus ATCC 51449 flagellar basal-body rod protein FlgB NP_860938.1 1346855 D 235279 CDS NP_860939.1 32266907 1493096 1347308..1347799 1 NC_004917.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; flagellar basal body rod protein FlgC 1347799 flgC 1493096 flgC Helicobacter hepaticus ATCC 51449 flagellar basal body rod protein FlgC NP_860939.1 1347308 D 235279 CDS NP_860940.1 32266908 1493097 1347809..1348120 1 NC_004917.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; flagellar hook-basal body protein FliE 1348120 fliE 1493097 fliE Helicobacter hepaticus ATCC 51449 flagellar hook-basal body protein FliE NP_860940.1 1347809 D 235279 CDS NP_860941.1 32266909 1493098 1348129..1349922 1 NC_004917.1 probable penicillin-binding protein; hypothetical protein 1349922 1493098 HH1410 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860941.1 1348129 D 235279 CDS NP_860942.1 32266910 1493099 1349931..1350071 1 NC_004917.1 hypothetical protein 1350071 1493099 HH1411 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860942.1 1349931 D 235279 CDS NP_860943.1 32266911 1493100 1350151..1350705 1 NC_004917.1 similar to Helicobacter pylori JHP0216; hypothetical protein 1350705 1493100 HH1412 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860943.1 1350151 D 235279 CDS NP_860944.1 32266912 1493101 complement(1350702..1353566) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1353566 1493101 HH1413 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860944.1 1350702 R 235279 CDS NP_860945.1 32266913 1493102 complement(1353570..1354373) 1 NC_004917.1 alpha chain; tryptophan synthase 1354373 trpA 1493102 trpA Helicobacter hepaticus ATCC 51449 tryptophan synthase NP_860945.1 1353570 R 235279 CDS NP_860946.1 32266914 1493103 1354518..1355780 1 NC_004917.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; tryptophan synthase subunit beta 1355780 trpB 1493103 trpB Helicobacter hepaticus ATCC 51449 tryptophan synthase subunit beta NP_860946.1 1354518 D 235279 CDS NP_860947.1 32266915 1493104 complement(1355794..1356162) 1 NC_004917.1 this stereospecific enzymes reduces the R isomer of methionine sulfoxide while MsrA reduces the S form; a fusion protein of this enzyme with MsrA and thioredoxin provides protection against oxidative stress in Neisseria gonorrhoeae; methionine sulfoxide reductase B 1356162 1493104 HH1416 Helicobacter hepaticus ATCC 51449 methionine sulfoxide reductase B NP_860947.1 1355794 R 235279 CDS NP_860948.1 32266916 1493105 complement(1356164..1357156) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1357156 1493105 HH1417 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860948.1 1356164 R 235279 CDS NP_860949.1 32266917 1493106 1357286..1360006 1 NC_004917.1 hypothetical protein 1360006 1493106 HH1418 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860949.1 1357286 D 235279 CDS NP_860950.1 32266918 1493107 1360016..1360957 1 NC_004917.1 hypothetical protein 1360957 1493107 HH1419 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860950.1 1360016 D 235279 CDS NP_860951.1 32266919 1493108 1360957..1363026 1 NC_004917.1 hypothetical protein 1363026 1493108 HH1420 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860951.1 1360957 D 235279 CDS NP_860952.1 32266920 1493109 1363026..1364294 1 NC_004917.1 hypothetical protein 1364294 1493109 HH1421 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860952.1 1363026 D 235279 CDS NP_860953.1 32266921 1493110 1364426..1365442 1 NC_004917.1 similar to Neisseria meningitidis NMA1635; hypothetical protein 1365442 1493110 HH1422 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860953.1 1364426 D 235279 CDS NP_860954.1 32266922 1493111 1365552..1366979 1 NC_004917.1 methyltransferase subunit; type I restriction-modification system 1366979 1493111 HH1423 Helicobacter hepaticus ATCC 51449 type I restriction-modification system NP_860954.1 1365552 D 235279 CDS NP_860955.1 32266923 1493112 1367061..1368368 1 NC_004917.1 possible arsenical pump membrane protein; hypothetical protein 1368368 1493112 HH1424 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860955.1 1367061 D 235279 CDS NP_860956.1 32266924 1493113 1368440..1370017 1 NC_004917.1 hypothetical protein 1370017 1493113 HH1425 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860956.1 1368440 D 235279 CDS NP_860957.1 32266925 1493114 1370098..1370940 1 NC_004917.1 similar to Campylobacter jejuni CJ1420c; hypothetical protein 1370940 1493114 HH1426 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860957.1 1370098 D 235279 CDS NP_860958.1 32266926 1493115 1370990..1371775 1 NC_004917.1 possible methyltransferase; hypothetical protein 1371775 1493115 HH1427 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860958.1 1370990 D 235279 CDS NP_860959.1 32266927 1493116 1371816..1373408 1 NC_004917.1 hypothetical protein 1373408 1493116 HH1428 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860959.1 1371816 D 235279 CDS NP_860960.1 32266928 1493117 1373504..1374199 1 NC_004917.1 hypothetical protein 1374199 1493117 HH1429 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860960.1 1373504 D 235279 CDS NP_860961.1 32266929 1493118 1374211..1374552 1 NC_004917.1 hypothetical protein 1374552 1493118 HH1430 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860961.1 1374211 D 235279 CDS NP_860962.1 32266930 1493119 1374657..1374989 1 NC_004917.1 hypothetical protein 1374989 1493119 HH1431 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860962.1 1374657 D 235279 CDS NP_860963.1 32266931 1493120 1375002..1375514 1 NC_004917.1 predicted secreted protein; hypothetical protein 1375514 1493120 HH1432 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860963.1 1375002 D 235279 CDS NP_860964.1 32266932 1493121 1375515..1375691 1 NC_004917.1 hypothetical protein 1375691 1493121 HH1433 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860964.1 1375515 D 235279 CDS NP_860965.1 32266933 1493122 1376248..1379742 1 NC_004917.1 type I restriction/modification enzyme 1379742 1493122 HH1434 Helicobacter hepaticus ATCC 51449 type I restriction/modification enzyme NP_860965.1 1376248 D 235279 CDS NP_860966.1 32266934 1493123 1379811..1380461 1 NC_004917.1 possible restriction/modification enzyme; hypothetical protein 1380461 1493123 HH1435 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860966.1 1379811 D 235279 CDS NP_860967.1 32266935 1493124 1380629..1382962 1 NC_004917.1 similar to Campylobacter jejuni CJ1418c; hypothetical protein 1382962 1493124 HH1436 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860967.1 1380629 D 235279 CDS NP_860968.1 32266936 1493125 1382959..1383591 1 NC_004917.1 similar to Campylobacter jejuni CJ1417c; hypothetical protein 1383591 1493125 HH1437 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860968.1 1382959 D 235279 CDS NP_860969.1 32266937 1493126 1383594..1384199 1 NC_004917.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; adenylylsulfate kinase 1384199 cysC 1493126 cysC Helicobacter hepaticus ATCC 51449 adenylylsulfate kinase NP_860969.1 1383594 D 235279 CDS NP_860970.1 32266938 1493127 1384199..1384957 1 NC_004917.1 possible sugar nucleotidyltransferase; hypothetical protein 1384957 1493127 HH1439 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860970.1 1384199 D 235279 CDS NP_860971.1 32266939 1493128 1385005..1385805 1 NC_004917.1 probable CysQ protein homolog; hypothetical protein 1385805 cysQ 1493128 cysQ Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860971.1 1385005 D 235279 CDS NP_860972.1 32266940 1493129 complement(1386017..1386409) 1 NC_004917.1 similar to Campylobacter jejuni CJ1137c; hypothetical protein 1386409 1493129 HH1441 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860972.1 1386017 R 235279 CDS NP_860973.1 32266941 1493130 complement(1386465..1387922) 1 NC_004917.1 similar to Campylobacter jejuni CJ0140; hypothetical protein 1387922 1493130 HH1442 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860973.1 1386465 R 235279 CDS NP_860974.1 32266942 1493131 complement(1387897..1389909) 1 NC_004917.1 endonuclease 1389909 1493131 HH1443 Helicobacter hepaticus ATCC 51449 endonuclease NP_860974.1 1387897 R 235279 CDS NP_860975.1 32266943 1493132 1390108..1394235 1 NC_004917.1 guanosine monophosphate synthetase GuaA 1394235 guaA 1493132 guaA Helicobacter hepaticus ATCC 51449 guanosine monophosphate synthetase GuaA NP_860975.1 1390108 D 235279 CDS NP_860976.1 32266944 1493133 1394487..1394813 1 NC_004917.1 similar to Helicobacter pylori type II DNA modification enzyme JHP0045; hypothetical protein 1394813 1493133 HH1445 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860976.1 1394487 D 235279 CDS NP_860977.1 32266945 1493134 1395180..1395875 1 NC_004917.1 cytolethal distending toxin CdtA 1395875 cdtA 1493134 cdtA Helicobacter hepaticus ATCC 51449 cytolethal distending toxin CdtA NP_860977.1 1395180 D 235279 CDS NP_860978.1 32266946 1493135 1395895..1396716 1 NC_004917.1 cytolethal distending toxin CdtB 1396716 cdtB 1493135 cdtB Helicobacter hepaticus ATCC 51449 cytolethal distending toxin CdtB NP_860978.1 1395895 D 235279 CDS NP_860979.1 32266947 1493136 1396726..1397277 1 NC_004917.1 cytolethal distending toxin CdtC 1397277 cdtC 1493136 cdtC Helicobacter hepaticus ATCC 51449 cytolethal distending toxin CdtC NP_860979.1 1396726 D 235279 CDS NP_860980.1 32266948 1493137 1397252..1397521 1 NC_004917.1 hypothetical protein 1397521 1493137 HH1449 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860980.1 1397252 D 235279 CDS NP_860981.1 32266949 1493138 1397568..1398116 1 NC_004917.1 hypothetical protein 1398116 1493138 HH1450 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860981.1 1397568 D 235279 CDS NP_860982.1 32266950 1493139 1398440..1398871 1 NC_004917.1 possible cation efflux pump; hypothetical protein 1398871 1493139 HH1451 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860982.1 1398440 D 235279 CDS NP_860983.1 32266951 1493140 1398868..1399182 1 NC_004917.1 possible cation efflux pump; hypothetical protein 1399182 1493140 HH1452 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860983.1 1398868 D 235279 CDS NP_860984.1 32266952 1493141 1399278..1399382 1 NC_004917.1 hypothetical protein 1399382 1493141 HH1453 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860984.1 1399278 D 235279 CDS NP_860985.1 32266953 1493142 1399379..1400545 1 NC_004917.1 similar to Listeria monocytogenes antibiotic resistance protein LMO0872; hypothetical protein 1400545 1493142 HH1454 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860985.1 1399379 D 235279 CDS NP_860986.1 32266954 1493143 complement(1400613..1401536) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1401536 1493143 HH1455 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860986.1 1400613 R 235279 CDS NP_860987.1 32266955 1493144 complement(1401533..1402252) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1402252 1493144 HH1456 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860987.1 1401533 R 235279 CDS NP_860988.1 32266956 1493145 complement(1402252..1402944) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1402944 1493145 HH1457 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860988.1 1402252 R 235279 CDS NP_860989.1 32266957 1493146 complement(1402947..1403522) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1403522 1493146 HH1458 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860989.1 1402947 R 235279 CDS NP_860990.1 32266958 1493147 1403590..1403754 1 NC_004917.1 hypothetical protein 1403754 1493147 HH1459 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860990.1 1403590 D 235279 CDS NP_860991.1 32266959 1493148 1403772..1404287 1 NC_004917.1 similar to yersinia pestis YP1998; predicted secreted protein; hypothetical protein 1404287 1493148 HH1460 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860991.1 1403772 D 235279 CDS NP_860992.1 32266960 1493149 1404325..1405242 1 NC_004917.1 predicted secreted protein; hypothetical protein 1405242 1493149 HH1461 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860992.1 1404325 D 235279 CDS NP_860993.1 32266961 1493150 1405284..1406444 1 NC_004917.1 aldo/keto reductase 1406444 1493150 HH1462 Helicobacter hepaticus ATCC 51449 aldo/keto reductase NP_860993.1 1405284 D 235279 CDS NP_860994.1 32266962 1493151 complement(1406581..1407066) 1 NC_004917.1 similar to Bacillus halodurans BH0306; hypothetical protein 1407066 1493151 HH1463 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860994.1 1406581 R 235279 CDS NP_860995.1 32266963 1493152 1407211..1408713 1 NC_004917.1 similar to Pseudomonas aeruginosa PA1316; predicted efflux transporter; hypothetical protein 1408713 1493152 HH1464 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860995.1 1407211 D 235279 CDS NP_860996.1 32266964 1493153 1408875..1409483 1 NC_004917.1 hypothetical protein 1409483 1493153 HH1465 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860996.1 1408875 D 235279 CDS NP_860997.1 32266965 1492013 complement(1409556..1409666) 1 NC_004917.1 hypothetical protein 1409666 1492013 HH1466 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860997.1 1409556 R 235279 CDS NP_860998.1 32266966 1492014 1409791..1410048 1 NC_004917.1 predicted secreted protein; hypothetical protein 1410048 1492014 HH1467 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860998.1 1409791 D 235279 CDS NP_860999.1 32266967 1492015 1410045..1410554 1 NC_004917.1 similar to Lactococcus lactis gamma-carboxymuconolactone decarboxylase; hypothetical protein 1410554 1492015 HH1468 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_860999.1 1410045 D 235279 CDS NP_861000.1 32266968 1492016 1410599..1411216 1 NC_004917.1 possible galactoside acyltransferase; hypothetical protein 1411216 1492016 HH1469 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861000.1 1410599 D 235279 CDS NP_861001.1 32266969 1492017 1411334..1413265 1 NC_004917.1 predicted secreted protein; hypothetical protein 1413265 1492017 HH1470 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861001.1 1411334 D 235279 CDS NP_861002.1 32266970 1492018 1413597..1414475 1 NC_004917.1 aldo/keto reductase 1414475 1492018 HH1471 Helicobacter hepaticus ATCC 51449 aldo/keto reductase NP_861002.1 1413597 D 235279 CDS NP_861003.1 32266971 1492019 1414566..1415150 1 NC_004917.1 modulator of drug activity MdaB 1415150 mdaB 1492019 mdaB Helicobacter hepaticus ATCC 51449 modulator of drug activity MdaB NP_861003.1 1414566 D 235279 CDS NP_861004.1 32266972 1492020 1415203..1415952 1 NC_004917.1 predicted secreted protein; hypothetical protein 1415952 1492020 HH1473 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861004.1 1415203 D 235279 CDS NP_861005.1 32266973 1492021 complement(1415926..1416495) 1 NC_004917.1 similar to Bacteroides vulgaris nitroimidazole antibiotic resistance protein; hypothetical protein 1416495 1492021 HH1474 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861005.1 1415926 R 235279 CDS NP_861006.1 32266974 1492022 complement(1416672..1417043) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1417043 1492022 HH1475 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861006.1 1416672 R 235279 CDS NP_861007.1 32266975 1492023 complement(1416895..1417290) 1 NC_004917.1 similar to Campylobacter jejuni CJ1523c; hypothetical protein 1417290 1492023 HH1476 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861007.1 1416895 R 235279 CDS NP_861008.1 32266976 1492024 1417378..1417476 1 NC_004917.1 hypothetical protein 1417476 1492024 HH1477 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861008.1 1417378 D 235279 CDS NP_861009.1 32266977 1492025 1417559..1418596 1 NC_004917.1 similar to Escherichia coli HybA hydrogenase; hypothetical protein 1418596 1492025 HH1478 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861009.1 1417559 D 235279 CDS NP_861010.1 32266978 1492026 1418593..1419267 1 NC_004917.1 similar to Vibrio cholerae VC1511; predicted hydrogenase cytochrome B component; hypothetical protein 1419267 1492026 HH1479 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861010.1 1418593 D 235279 CDS NP_861011.1 32266979 1492027 1419518..1420183 1 NC_004917.1 ATP-binding protein; ABC-type amino-acid transporter 1420183 glnQ_2 1492027 glnQ_2 Helicobacter hepaticus ATCC 51449 ABC-type amino-acid transporter NP_861011.1 1419518 D 235279 CDS NP_861012.1 32266980 1492028 1420203..1420985 1 NC_004917.1 PEB1; bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein 1420985 1492028 HH1481 Helicobacter hepaticus ATCC 51449 bifunctional adhesin/ABC transporter aspartate/glutamate-binding protein NP_861012.1 1420203 D 235279 CDS NP_861013.1 32266981 1492029 1420990..1421739 1 NC_004917.1 ABC-type amino-acid transporter permease 1421739 1492029 HH1482 Helicobacter hepaticus ATCC 51449 ABC-type amino-acid transporter permease NP_861013.1 1420990 D 235279 CDS NP_861014.1 32266982 1492030 1421750..1422409 1 NC_004917.1 ABC-type amino-acid transporter permease 1422409 gltK 1492030 gltK Helicobacter hepaticus ATCC 51449 ABC-type amino-acid transporter permease NP_861014.1 1421750 D 235279 CDS NP_861015.1 32266983 1492031 complement(1422524..1422940) 1 NC_004917.1 similar to Campylobacter jejuni HP1065; hypothetical protein 1422940 1492031 HH1484 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861015.1 1422524 R 235279 CDS NP_861016.1 32266984 1492032 complement(1422937..1423158) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1423158 1492032 HH1485 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861016.1 1422937 R 235279 CDS NP_861017.1 32266985 1492033 complement(1423188..1423745) 1 NC_004917.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; 16S rRNA methyltransferase GidB 1423745 gidB 1492033 gidB Helicobacter hepaticus ATCC 51449 16S rRNA methyltransferase GidB NP_861017.1 1423188 R 235279 CDS NP_861018.1 32266986 1492034 complement(1423781..1424878) 1 NC_004917.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; S-adenosylmethionine:tRNA ribosyltransferase-isomerase 1424878 queA 1492034 queA Helicobacter hepaticus ATCC 51449 S-adenosylmethionine:tRNA ribosyltransferase-isomerase NP_861018.1 1423781 R 235279 CDS NP_861019.1 32266987 1492035 complement(1424875..1425672) 1 NC_004917.1 Sec-independent protein secretion pathway component TatC 1425672 tatC 1492035 tatC Helicobacter hepaticus ATCC 51449 Sec-independent protein secretion pathway component TatC NP_861019.1 1424875 R 235279 CDS NP_861020.1 32266988 1492036 complement(1425675..1426244) 1 NC_004917.1 mediates the export of protein precursors bearing twin-arginine signal peptides; sec-independent translocase 1426244 1492036 HH1489 Helicobacter hepaticus ATCC 51449 sec-independent translocase NP_861020.1 1425675 R 235279 CDS NP_861021.1 32266989 1492037 1426404..1427672 1 NC_004917.1 catalyzes a two-step reaction, first charging a serine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; seryl-tRNA synthetase 1427672 serS 1492037 serS Helicobacter hepaticus ATCC 51449 seryl-tRNA synthetase NP_861021.1 1426404 D 235279 CDS NP_861022.1 32266990 1492038 1427685..1430168 1 NC_004917.1 similar to Helicobacter pylori HP1479; predicted membrane-associated; hypothetical protein 1430168 1492038 HH1491 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861022.1 1427685 D 235279 CDS NP_861023.1 32266991 1492039 complement(1430179..1430532) 1 NC_004917.1 hypothetical protein 1430532 1492039 HH1492 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861023.1 1430179 R 235279 CDS NP_861024.1 32266992 1492040 1430783..1432066 1 NC_004917.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; type II citrate synthase 1432066 gltA 1492040 gltA Helicobacter hepaticus ATCC 51449 type II citrate synthase NP_861024.1 1430783 D 235279 CDS NP_861025.1 32266993 1492041 1432130..1432666 1 NC_004917.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; 50S ribosomal protein L25 1432666 rplY 1492041 rplY Helicobacter hepaticus ATCC 51449 50S ribosomal protein L25 NP_861025.1 1432130 D 235279 CDS NP_861026.1 32266994 1492042 1432666..1433337 1 NC_004917.1 Enables the recycling of peptidyl-tRNAs produced at termination of translation; peptidyl-tRNA hydrolase 1433337 pth 1492042 pth Helicobacter hepaticus ATCC 51449 peptidyl-tRNA hydrolase NP_861026.1 1432666 D 235279 CDS NP_861027.1 32266995 1492043 1433340..1434419 1 NC_004917.1 similar to Helicobacter pylori HP1498; predicted membrane-associated; hypothetical protein 1434419 1492043 HH1496 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861027.1 1433340 D 235279 CDS NP_861028.1 32266996 1492044 1434494..1435174 1 NC_004917.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; ATP synthase F0F1 subunit A 1435174 atpB 1492044 atpB Helicobacter hepaticus ATCC 51449 ATP synthase F0F1 subunit A NP_861028.1 1434494 D 235279 CDS NP_861029.1 32266997 1492045 1435161..1435760 1 NC_004917.1 similar to Aquifex aeolicus thiamine phosphate synthase AQ1366; hypothetical protein 1435760 1492045 HH1498 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861029.1 1435161 D 235279 CDS NP_861030.1 32266998 1492046 complement(1435729..1437816) 1 NC_004917.1 similar to Campylobacter jejuni integral membrane protein CJ1055c; hypothetical protein 1437816 1492046 HH1499 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861030.1 1435729 R 235279 CDS NP_861031.1 32266999 1492047 1437912..1438781 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1438781 1492047 HH1500 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861031.1 1437912 D 235279 CDS NP_861032.1 32267000 1492048 1438904..1439227 1 NC_004917.1 similar to Helicobacter pylori HP0945; predicted secreted protein; hypothetical protein 1439227 1492048 HH1501 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861032.1 1438904 D 235279 CDS NP_861033.1 32267001 1492049 complement(1439273..1440082) 1 NC_004917.1 similar to Bacillus halodurans BH0857; predicted secreted protein; hypothetical protein 1440082 1492049 HH1502 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861033.1 1439273 R 235279 CDS NP_861034.1 32267002 1492050 complement(1440051..1441856) 1 NC_004917.1 similar to Campylobacter jejuni CJ0522; predicted membrane-associated; hypothetical protein 1441856 1492050 HH1503 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861034.1 1440051 R 235279 CDS NP_861035.1 32267003 1492051 complement(1441879..1442784) 1 NC_004917.1 similar to Campylobacter jejuni CJ0937; predicted integral membrane protein; hypothetical protein 1442784 1492051 HH1504 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861035.1 1441879 R 235279 CDS NP_861036.1 32267004 1492052 1443006..1444109 1 NC_004917.1 ATP/GTP-binding protein 1444109 mpr 1492052 mpr Helicobacter hepaticus ATCC 51449 ATP/GTP-binding protein NP_861036.1 1443006 D 235279 CDS NP_861037.1 32267005 1492053 complement(1444106..1445434) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1445434 1492053 HH1506 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861037.1 1444106 R 235279 CDS NP_861038.1 32267006 1492054 1445971..1447245 1 NC_004917.1 diaminopimelate decarboxylase 1447245 lysA 1492054 lysA Helicobacter hepaticus ATCC 51449 diaminopimelate decarboxylase NP_861038.1 1445971 D 235279 CDS NP_861039.1 32267007 1492055 1447265..1448362 1 NC_004917.1 chorismate mutase 1448362 pheA 1492055 pheA Helicobacter hepaticus ATCC 51449 chorismate mutase NP_861039.1 1447265 D 235279 CDS NP_861040.1 32267008 1492056 1448391..1449278 1 NC_004917.1 similar to Helicobacter pylori JHP0277; hypothetical protein 1449278 1492056 HH1509 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861040.1 1448391 D 235279 CDS NP_861041.1 32267009 1492057 1449353..1450087 1 NC_004917.1 similar to Streptomyces globisporus lysozyme M1 precursor; hypothetical protein 1450087 1492057 HH1510 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861041.1 1449353 D 235279 CDS NP_861042.1 32267010 1492058 1450091..1451068 1 NC_004917.1 hypothetical protein 1451068 1492058 HH1511 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861042.1 1450091 D 235279 CDS NP_861043.1 32267011 1492059 1451159..1452391 1 NC_004917.1 hypothetical protein 1452391 1492059 HH1512 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861043.1 1451159 D 235279 CDS NP_861044.1 32267012 1492060 1452401..1453534 1 NC_004917.1 similar to Mycobacterium tuberculosis Rv1679; predicted acyl-CoA dehydrogenase; hypothetical protein 1453534 1492060 HH1513 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861044.1 1452401 D 235279 CDS NP_861045.1 32267013 1492061 1453537..1454409 1 NC_004917.1 similar to Mycobacterium tuberculosis Rv1680; hypothetical protein 1454409 1492061 HH1514 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861045.1 1453537 D 235279 CDS NP_861046.1 32267014 1492062 complement(1454406..1455563) 1 NC_004917.1 catalyzes the modification of U13 in tRNA(Glu); tRNA pseudouridine synthase D 1455563 truD 1492062 truD Helicobacter hepaticus ATCC 51449 tRNA pseudouridine synthase D NP_861046.1 1454406 R 235279 CDS NP_861047.1 32267015 1492063 complement(1455566..1456600) 1 NC_004917.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; alanine racemase 1456600 alr 1492063 alr Helicobacter hepaticus ATCC 51449 alanine racemase NP_861047.1 1455566 R 235279 CDS NP_861048.1 32267016 1492064 complement(1456645..1456950) 1 NC_004917.1 cytochrome c553 1456950 1492064 HH1517 Helicobacter hepaticus ATCC 51449 cytochrome c553 NP_861048.1 1456645 R 235279 CDS NP_861049.1 32267017 1492065 complement(1457046..1457633) 1 NC_004917.1 involved in a recombinational process of DNA repair, independent of the recBC complex; recombination protein RecR 1457633 recR 1492065 recR Helicobacter hepaticus ATCC 51449 recombination protein RecR NP_861049.1 1457046 R 235279 CDS NP_861050.1 32267018 1492066 1457748..1458905 1 NC_004917.1 co-chaperone and heat shock protein DnaJ 1458905 dnaJ_2 1492066 dnaJ_2 Helicobacter hepaticus ATCC 51449 co-chaperone and heat shock protein DnaJ NP_861050.1 1457748 D 235279 CDS NP_861051.1 32267019 1492067 complement(1458895..1459326) 1 NC_004917.1 hypothetical protein 1459326 1492067 HH1520 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861051.1 1458895 R 235279 CDS NP_861052.1 32267020 1492068 complement(1459358..1459903) 1 NC_004917.1 hypothetical protein 1459903 1492068 HH1521 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861052.1 1459358 R 235279 CDS NP_861053.1 32267021 1492069 complement(1460142..1460957) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1460957 1492069 HH1522 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861053.1 1460142 R 235279 CDS NP_861054.1 32267022 1492070 complement(1460961..1461254) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1461254 1492070 HH1523 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861054.1 1460961 R 235279 CDS NP_861055.1 32267023 1492071 complement(1461318..1461686) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1461686 1492071 HH1524 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861055.1 1461318 R 235279 CDS NP_861056.1 32267024 1492072 complement(1461758..1462057) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1462057 1492072 HH1525 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861056.1 1461758 R 235279 CDS NP_861057.1 32267025 1492073 complement(1462173..1462880) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1462880 1492073 HH1526 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861057.1 1462173 R 235279 CDS NP_861058.1 32267026 1492074 complement(1462898..1463215) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1463215 1492074 HH1527 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861058.1 1462898 R 235279 CDS NP_861059.1 32267027 1492075 complement(1463461..1464798) 1 NC_004917.1 hypothetical protein 1464798 1492075 HH1528 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861059.1 1463461 R 235279 CDS NP_861060.1 32267028 1492076 complement(1464820..1467849) 1 NC_004917.1 similar to Clostridium acetobutylicum CAC2401; predicted activator of 2-hydroxyglutaryl-CoA dehydratase; hypothetical protein 1467849 1492076 HH1529 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861060.1 1464820 R 235279 CDS NP_861061.1 32267029 1492077 complement(1467923..1468615) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1468615 1492077 HH1530 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861061.1 1467923 R 235279 CDS NP_861062.1 32267030 1492078 complement(1468560..1469150) 1 NC_004917.1 phosphoheptose isomerase 1469150 gmhA 1492078 gmhA Helicobacter hepaticus ATCC 51449 phosphoheptose isomerase NP_861062.1 1468560 R 235279 CDS NP_861063.1 32267031 1492079 complement(1469135..1470583) 1 NC_004917.1 similar to Campylobacter jejuni ADP-heptose synthase; hypothetical protein 1470583 1492079 HH1532 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861063.1 1469135 R 235279 CDS NP_861064.1 32267032 1492080 complement(1470607..1471614) 1 NC_004917.1 ADP-L-glycero-D-manno-heptose-6-epimerase 1471614 1492080 HH1533 Helicobacter hepaticus ATCC 51449 ADP-L-glycero-D-manno-heptose-6-epimerase NP_861064.1 1470607 R 235279 CDS NP_861065.1 32267033 1492081 complement(1471625..1472158) 1 NC_004917.1 phosphatase; hypothetical protein 1472158 1492081 HH1534 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861065.1 1471625 R 235279 CDS NP_861066.1 32267034 1492082 complement(1472392..1473138) 1 NC_004917.1 similar to Campylobacter jejuni CJ1493c; predicted membrane-associated; hypothetical protein 1473138 1492082 HH1535 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861066.1 1472392 R 235279 CDS NP_861067.1 32267035 1492083 complement(1473145..1474074) 1 NC_004917.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; ribose-phosphate pyrophosphokinase 1474074 prsA 1492083 prsA Helicobacter hepaticus ATCC 51449 ribose-phosphate pyrophosphokinase NP_861067.1 1473145 R 235279 CDS NP_861068.1 32267036 1492084 complement(1474131..1474841) 1 NC_004917.1 hypothetical protein 1474841 1492084 HH1537 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861068.1 1474131 R 235279 CDS NP_861069.1 32267037 1492085 1474976..1475068 1 NC_004917.1 hypothetical protein 1475068 1492085 HH1538 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861069.1 1474976 D 235279 CDS NP_861070.1 32267038 1492086 1475123..1476586 1 NC_004917.1 EngA; essential Neisserial GTPase; synchronizes cellular events by interacting with multiple targets with tandem G-domains; overexpression in Escherichia coli suppresses rrmJ mutation; structural analysis of the Thermotoga maritima ortholog shows different nucleotide binding affinities in the two binding domains; GTP-binding protein EngA 1476586 engA 1492086 engA Helicobacter hepaticus ATCC 51449 GTP-binding protein EngA NP_861070.1 1475123 D 235279 CDS NP_861071.1 32267039 1492087 complement(1476601..1477761) 1 NC_004917.1 methionine adenosyltransferase; catalyzes the formation of S-adenosylmethionine from methionine and ATP; methionine adenosyltransferase; S-adenosylmethionine synthetase 1477761 metK 1492087 metK Helicobacter hepaticus ATCC 51449 S-adenosylmethionine synthetase NP_861071.1 1476601 R 235279 CDS NP_861072.1 32267040 1492088 1477980..1479989 1 NC_004917.1 hypothetical protein 1479989 1492088 HH1541 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861072.1 1477980 D 235279 CDS NP_861073.1 32267041 1492089 1480045..1480188 1 NC_004917.1 predicted secreted protein; hypothetical protein 1480188 1492089 HH1542 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861073.1 1480045 D 235279 CDS NP_861074.1 32267042 1492090 1480257..1480847 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1480847 1492090 HH1543 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861074.1 1480257 D 235279 CDS NP_861075.1 32267043 1492091 1480946..1481542 1 NC_004917.1 alkyl hydroperoxide reductase 1481542 tsaA 1492091 tsaA Helicobacter hepaticus ATCC 51449 alkyl hydroperoxide reductase NP_861075.1 1480946 D 235279 CDS NP_861076.1 32267044 1492092 complement(1480949..1481569) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1481569 1492092 HH1545 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861076.1 1480949 R 235279 CDS NP_861077.1 32267045 1492093 1481826..1482209 1 NC_004917.1 similar to Pseudomonas aeruginosa PA3235; predicted membrane-associated; hypothetical protein 1482209 1492093 HH1546 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861077.1 1481826 D 235279 CDS NP_861078.1 32267046 1492094 1482209..1483858 1 NC_004917.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; acetate permease 1483858 actP 1492094 actP Helicobacter hepaticus ATCC 51449 acetate permease NP_861078.1 1482209 D 235279 CDS NP_861079.1 32267047 1492095 complement(1483878..1485854) 1 NC_004917.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; excinuclease ABC subunit B 1485854 uvrB 1492095 uvrB Helicobacter hepaticus ATCC 51449 excinuclease ABC subunit B NP_861079.1 1483878 R 235279 CDS NP_861080.1 32267048 1492096 1485924..1486145 1 NC_004917.1 similar to Campylobacter jejuni CJ0681; hypothetical protein 1486145 1492096 HH1549 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861080.1 1485924 D 235279 CDS NP_861081.1 32267049 1492097 1486145..1486411 1 NC_004917.1 similar to Helicobacter pylori HP0386; hypothetical protein 1486411 1492097 HH1550 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861081.1 1486145 D 235279 CDS NP_861082.1 32267050 1492098 1486408..1488321 1 NC_004917.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; primosome assembly protein PriA 1488321 priA 1492098 priA Helicobacter hepaticus ATCC 51449 primosome assembly protein PriA NP_861082.1 1486408 D 235279 CDS NP_861083.1 32267051 1492099 1488377..1488817 1 NC_004917.1 similar to Campylobacter jejuni CJ1460; hypothetical protein 1488817 1492099 HH1552 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861083.1 1488377 D 235279 CDS NP_861084.1 32267052 1492100 1488866..1489456 1 NC_004917.1 DNA methylase; hypothetical protein 1489456 1492100 HH1553 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861084.1 1488866 D 235279 CDS NP_861085.1 32267053 1492101 1489459..1490049 1 NC_004917.1 interacts with the cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; flagellar basal body protein FliL 1490049 fliL 1492101 fliL Helicobacter hepaticus ATCC 51449 flagellar basal body protein FliL NP_861085.1 1489459 D 235279 CDS NP_861086.1 32267054 1492102 1490054..1490416 1 NC_004917.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; 4'-phosphopantetheinyl transferase 1490416 acpS 1492102 acpS Helicobacter hepaticus ATCC 51449 4'-phosphopantetheinyl transferase NP_861086.1 1490054 D 235279 CDS NP_861087.1 32267055 1492103 complement(1490409..1490567) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1490567 1492103 HH1556 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861087.1 1490409 R 235279 CDS NP_861088.2 161546623 1492104 complement(1490656..1491999) 1 NC_004917.1 phospho-2-dehydro-3-deoxyheptonate aldolase 1491999 aroF 1492104 aroF Helicobacter hepaticus ATCC 51449 phospho-2-dehydro-3-deoxyheptonate aldolase NP_861088.2 1490656 R 235279 CDS NP_861089.1 32267057 1492105 complement(1491941..1492054) 1 NC_004917.1 hypothetical protein 1492054 1492105 HH1558 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861089.1 1491941 R 235279 CDS NP_861090.1 32267058 1492106 complement(1492063..1492815) 1 NC_004917.1 oxidoreductase 1492815 1492106 HH1559 Helicobacter hepaticus ATCC 51449 oxidoreductase NP_861090.1 1492063 R 235279 CDS NP_861091.1 32267059 1492107 complement(1492812..1493819) 1 NC_004917.1 similar to Pseudomonas aeruginosa PA1116; hypothetical protein 1493819 1492107 HH1560 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861091.1 1492812 R 235279 CDS NP_861092.1 32267060 1492108 complement(1493782..1494357) 1 NC_004917.1 hypothetical protein 1494357 1492108 HH1561 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861092.1 1493782 R 235279 CDS NP_861093.1 32267061 1492109 complement(1494380..1494481) 1 NC_004917.1 hypothetical protein 1494481 1492109 HH1562 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861093.1 1494380 R 235279 CDS NP_861094.1 32267062 1492110 complement(1494552..1495316) 1 NC_004917.1 possible ATP/GTP-binding protein; hypothetical protein 1495316 1492110 HH1563 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861094.1 1494552 R 235279 CDS NP_861095.1 32267063 1492111 complement(1495297..1497573) 1 NC_004917.1 ATP-binding subunit; ATP-dependent Clp protease ClpB 1497573 clpB 1492111 clpB Helicobacter hepaticus ATCC 51449 ATP-dependent Clp protease ClpB NP_861095.1 1495297 R 235279 CDS NP_861096.1 32267064 1492112 complement(1497586..1497849) 1 NC_004917.1 similar to Neisseria meningitidis NMB0837; hypothetical protein 1497849 1492112 HH1565 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861096.1 1497586 R 235279 CDS NP_861097.1 32267065 1492113 1497851..1497946 1 NC_004917.1 hypothetical protein 1497946 1492113 HH1566 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861097.1 1497851 D 235279 CDS NP_861098.1 32267066 1492114 complement(1498061..1498618) 1 NC_004917.1 Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates; 2-oxoglutarate-acceptor oxidoreductase subunit OorC 1498618 oorC 1492114 oorC Helicobacter hepaticus ATCC 51449 2-oxoglutarate-acceptor oxidoreductase subunit OorC NP_861098.1 1498061 R 235279 CDS NP_861099.1 32267067 1492115 complement(1498620..1499447) 1 NC_004917.1 Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; 2-oxoglutarate-acceptor oxidoreductase subunit OorB 1499447 oorB 1492115 oorB Helicobacter hepaticus ATCC 51449 2-oxoglutarate-acceptor oxidoreductase subunit OorB NP_861099.1 1498620 R 235279 CDS NP_861100.1 32267068 1492116 complement(1499449..1500573) 1 NC_004917.1 Couples the complete acetyl-CoA oxidation to aromatic ring reduction by the use of the low-potential electron shuttle ferredoxin; 2-oxoglutarate-acceptor oxidoreductase subunit OorA 1500573 oorA 1492116 oorA Helicobacter hepaticus ATCC 51449 2-oxoglutarate-acceptor oxidoreductase subunit OorA NP_861100.1 1499449 R 235279 CDS NP_861101.1 32267069 1492117 complement(1500583..1500894) 1 NC_004917.1 2-oxoglutarate-acceptor oxidoreductase subunit OorD 1500894 oorD 1492117 oorD Helicobacter hepaticus ATCC 51449 2-oxoglutarate-acceptor oxidoreductase subunit OorD NP_861101.1 1500583 R 235279 CDS NP_861102.1 32267070 1492118 complement(1500939..1501886) 1 NC_004917.1 malate dehydrogenase 1501886 mdh 1492118 mdh Helicobacter hepaticus ATCC 51449 malate dehydrogenase NP_861102.1 1500939 R 235279 CDS NP_861103.1 32267071 1492119 complement(1502015..1502917) 1 NC_004917.1 similar to Helicobacter pylori aminodeoxychorismate lyase HP0587; hypothetical protein 1502917 pabC 1492119 pabC Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861103.1 1502015 R 235279 CDS NP_861104.1 32267072 1492120 1502880..1505837 1 NC_004917.1 predicted secreted protein; hypothetical protein 1505837 1492120 HH1573 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861104.1 1502880 D 235279 CDS NP_861105.1 32267073 1492121 1505888..1506163 1 NC_004917.1 similar to Campylobacter jejuni CJ1397; hypothetical protein 1506163 1492121 HH1574 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861105.1 1505888 D 235279 CDS NP_861106.1 32267074 1492122 1506171..1506863 1 NC_004917.1 endonuclease III 1506863 nth 1492122 nth Helicobacter hepaticus ATCC 51449 endonuclease III NP_861106.1 1506171 D 235279 CDS NP_861107.1 32267075 1492123 1506941..1507345 1 NC_004917.1 hypothetical protein 1507345 1492123 HH1576 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861107.1 1506941 D 235279 CDS NP_861108.1 32267076 1492124 1507362..1507715 1 NC_004917.1 One of three proteins involved in switching the direction of the flagellar rotation; flagellar motor switch protein 1507715 fliN 1492124 fliN Helicobacter hepaticus ATCC 51449 flagellar motor switch protein NP_861108.1 1507362 D 235279 CDS NP_861109.1 32267077 1492125 1507833..1508624 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1508624 1492125 HH1578 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861109.1 1507833 D 235279 CDS NP_861110.1 32267078 1492126 1508624..1509382 1 NC_004917.1 similar to Helicobacter pylori HP0582; TonB-like; hypothetical protein 1509382 1492126 HH1579 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861110.1 1508624 D 235279 CDS NP_861111.1 32267079 1492127 complement(1509394..1509693) 1 NC_004917.1 hypothetical protein 1509693 1492127 HH1580 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861111.1 1509394 R 235279 CDS NP_861112.1 32267080 1492128 complement(1509707..1511080) 1 NC_004917.1 required for the synthesis of the hydromethylpyrimidine moiety of thiamine; thiamine biosynthesis protein ThiC 1511080 thiC 1492128 thiC Helicobacter hepaticus ATCC 51449 thiamine biosynthesis protein ThiC NP_861112.1 1509707 R 235279 CDS NP_861113.1 32267081 1492129 1511265..1512434 1 NC_004917.1 bifunctional enzyme involved in formation of 4-diphosphocytidyl-2-C-methyl-D-erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate and 2-C-methyl-D-erythritol 2,4-cyclodiphosphate and CMP from 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate; involved in isoprenoid and isopentenyl-PP biosynthesis; binds divalent cations; bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 1512434 ispDF 1492129 ispDF Helicobacter hepaticus ATCC 51449 bifunctional 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase/2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase NP_861113.1 1511265 D 235279 CDS NP_861114.1 32267082 1492130 1512482..1513390 1 NC_004917.1 similar to Campylobacter jejuni possible two-component response regulator CJ1608; hypothetical protein 1513390 1492130 HH1583 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861114.1 1512482 D 235279 CDS NP_861115.1 32267083 1492131 1513387..1513872 1 NC_004917.1 phosphatidylglycerophosphatase A 1513872 pgpA 1492131 pgpA Helicobacter hepaticus ATCC 51449 phosphatidylglycerophosphatase A NP_861115.1 1513387 D 235279 CDS NP_861116.1 32267084 1492132 complement(1513894..1514412) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1514412 1492132 HH1585 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861116.1 1513894 R 235279 CDS NP_861117.1 32267085 1492133 complement(1514436..1514537) 1 NC_004917.1 hypothetical protein 1514537 1492133 HH1586 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861117.1 1514436 R 235279 CDS NP_861118.1 32267086 1492134 complement(1514559..1515104) 1 NC_004917.1 hypothetical protein 1515104 1492134 HH1587 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861118.1 1514559 R 235279 CDS NP_861119.1 32267087 1492135 complement(1515149..1515961) 1 NC_004917.1 thiamine biosynthesis protein ThiF 1515961 thiF 1492135 thiF Helicobacter hepaticus ATCC 51449 thiamine biosynthesis protein ThiF NP_861119.1 1515149 R 235279 CDS NP_861120.1 32267088 1492136 complement(1515961..1518330) 1 NC_004917.1 paralysed flagella protein PflA 1518330 pflA 1492136 pflA Helicobacter hepaticus ATCC 51449 paralysed flagella protein PflA NP_861120.1 1515961 R 235279 CDS NP_861121.1 32267089 1492137 complement(1518370..1519848) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit N 1519848 nuoN 1492137 nuoN Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit N NP_861121.1 1518370 R 235279 CDS NP_861122.1 32267090 1492138 complement(1519850..1521427) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit M 1521427 nuoM 1492138 nuoM Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit M NP_861122.1 1519850 R 235279 CDS NP_861123.1 32267091 1492139 complement(1521424..1523301) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit L 1523301 nuoL 1492139 nuoL Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit L NP_861123.1 1521424 R 235279 CDS NP_861124.1 32267092 1492140 complement(1523304..1523606) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit K 1523606 nuoK 1492140 nuoK Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit K NP_861124.1 1523304 R 235279 CDS NP_861125.1 32267093 1492141 complement(1523603..1524124) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit J 1524124 nuoJ 1492141 nuoJ Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit J NP_861125.1 1523603 R 235279 CDS NP_861126.1 32267094 1492142 complement(1524117..1524755) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit I 1524755 nuoI 1492142 nuoI Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit I NP_861126.1 1524117 R 235279 CDS NP_861127.1 32267095 1492143 complement(1524764..1525762) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit H 1525762 nuoH 1492143 nuoH Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit H NP_861127.1 1524764 R 235279 CDS NP_861128.1 32267096 1492144 complement(1525759..1528233) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit G 1528233 nuoG 1492144 nuoG Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit G NP_861128.1 1525759 R 235279 CDS NP_861129.1 32267097 1492145 complement(1528230..1529042) 1 NC_004917.1 similar to Helicobacter pylori HP1265; predicted donor-ubiquinone reductase I; hypothetical protein 1529042 1492145 HH1598 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861129.1 1528230 R 235279 CDS NP_861130.1 32267098 1492146 complement(1529039..1529269) 1 NC_004917.1 similar to Helicobacter pylori 1264; predicted donor-ubiquinone reductase I; hypothetical protein 1529269 1492146 HH1599 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861130.1 1529039 R 235279 CDS NP_861131.1 32267099 1492147 complement(1529279..1530508) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to quinone; NADH dehydrogenase subunit D 1530508 nuoD 1492147 nuoD Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit D NP_861131.1 1529279 R 235279 CDS NP_861132.1 32267100 1492148 complement(1530505..1531248) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit C 1531248 nuoC 1492148 nuoC Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit C NP_861132.1 1530505 R 235279 CDS NP_861133.1 32267101 1492149 complement(1531262..1531771) 1 NC_004917.1 The point of entry for the majority of electrons that traverse the respiratory chain eventually resulting in the reduction of oxygen; NADH dehydrogenase subunit B 1531771 nuoB 1492149 nuoB Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit B NP_861133.1 1531262 R 235279 CDS NP_861134.1 32267102 1492150 complement(1531753..1532157) 1 NC_004917.1 Catalyzes the transfer of electrons from NADH to ubiquinone; NADH dehydrogenase subunit A 1532157 nuoA 1492150 nuoA Helicobacter hepaticus ATCC 51449 NADH dehydrogenase subunit A NP_861134.1 1531753 R 235279 CDS NP_861135.2 161546622 1492151 complement(1532285..1533001) 1 NC_004917.1 similar to Helicobacter pylori HP0162; hypothetical protein 1533001 yebC 1492151 yebC Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861135.2 1532285 R 235279 CDS NP_861136.1 32267104 1492152 1532989..1533093 1 NC_004917.1 hypothetical protein 1533093 1492152 HH1605 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861136.1 1532989 D 235279 CDS NP_861137.1 32267105 1492153 complement(1533122..1534099) 1 NC_004917.1 catalyzes the formation of porphobilinogen from 5-aminolevulinate; delta-aminolevulinic acid dehydratase 1534099 hemB 1492153 hemB Helicobacter hepaticus ATCC 51449 delta-aminolevulinic acid dehydratase NP_861137.1 1533122 R 235279 CDS NP_861138.1 32267106 1492154 complement(1534110..1535369) 1 NC_004917.1 two-component system histidine kinase 1535369 1492154 HH1607 Helicobacter hepaticus ATCC 51449 two-component system histidine kinase NP_861138.1 1534110 R 235279 CDS NP_861139.1 32267107 1492155 complement(1535384..1536049) 1 NC_004917.1 BaeR-like; two-component system response regulator 1536049 1492155 HH1608 Helicobacter hepaticus ATCC 51449 two-component system response regulator NP_861139.1 1535384 R 235279 CDS NP_861140.1 32267108 1492156 1536243..1536359 1 NC_004917.1 hypothetical protein 1536359 1492156 HH1609 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861140.1 1536243 D 235279 CDS NP_861141.1 32267109 1492157 complement(1536474..1536833) 1 NC_004917.1 hypothetical protein 1536833 1492157 HH1610 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861141.1 1536474 R 235279 CDS NP_861142.1 32267110 1492158 complement(1536803..1537066) 1 NC_004917.1 similar to Campylobacter jejuni CJ0787; hypothetical protein 1537066 1492158 HH1611 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861142.1 1536803 R 235279 CDS NP_861143.1 32267111 1492159 complement(1537143..1537946) 1 NC_004917.1 similar to Helicobacter pylori HP1182; hypothetical protein 1537946 1492159 HH1612 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861143.1 1537143 R 235279 CDS NP_861144.1 32267112 1492160 complement(1537936..1538244) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1538244 1492160 HH1613 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861144.1 1537936 R 235279 CDS NP_861145.1 32267113 1492161 complement(1538248..1539579) 1 NC_004917.1 similar to Helicobacter pylori HP1181; predicted efflux transporter; hypothetical protein 1539579 1492161 HH1614 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861145.1 1538248 R 235279 CDS NP_861146.1 32267114 1492162 complement(1539596..1540129) 1 NC_004917.1 peptidyl-prolyl cis-trans isomerase (rotamase) 1540129 ppiA 1492162 ppiA Helicobacter hepaticus ATCC 51449 peptidyl-prolyl cis-trans isomerase (rotamase) NP_861146.1 1539596 R 235279 CDS NP_861147.1 32267115 1492163 1540369..1541265 1 NC_004917.1 similar to Helicobacter pylori HP1440; hypothetical protein 1541265 1492163 HH1616 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861147.1 1540369 D 235279 CDS NP_861148.1 32267116 1492164 complement(1541277..1541369) 1 NC_004917.1 hypothetical protein 1541369 1492164 HH1617 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861148.1 1541277 R 235279 CDS NP_861149.1 32267117 1492165 1541379..1542764 1 NC_004917.1 protease 1542764 1492165 HH1618 Helicobacter hepaticus ATCC 51449 protease NP_861149.1 1541379 D 235279 CDS NP_861150.1 32267118 1492166 1542780..1543490 1 NC_004917.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; phosphoribosylaminoimidazole-succinocarboxamide synthase 1543490 purC 1492166 purC Helicobacter hepaticus ATCC 51449 phosphoribosylaminoimidazole-succinocarboxamide synthase NP_861150.1 1542780 D 235279 CDS NP_861151.1 32267119 1492167 1543500..1543742 1 NC_004917.1 predicted PurS-like protein; hypothetical protein 1543742 purS 1492167 purS Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861151.1 1543500 D 235279 CDS NP_861152.1 32267120 1492168 1543739..1544407 1 NC_004917.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase I 1544407 purQ 1492168 purQ Helicobacter hepaticus ATCC 51449 phosphoribosylformylglycinamidine synthase I NP_861152.1 1543739 D 235279 CDS NP_861153.1 32267121 1492169 1544420..1545514 1 NC_004917.1 similar to Helicobacter pylori JHP1268; predicted membrane-associated; hypothetical protein 1545514 1492169 HH1622 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861153.1 1544420 D 235279 CDS NP_861154.1 32267122 1492170 1545498..1546226 1 NC_004917.1 1-acyl-glycerol-3-phosphate acyltransferase 1546226 plsC 1492170 plsC Helicobacter hepaticus ATCC 51449 1-acyl-glycerol-3-phosphate acyltransferase NP_861154.1 1545498 D 235279 CDS NP_861155.1 32267123 1492171 1546443..1547849 1 NC_004917.1 Catalyzes (S)-dihydroorotate + O(2) = orotate + H(2)O(2) in the pyrimidine biosynthesis pathway; dihydroorotate dehydrogenase 1547849 pyrD 1492171 pyrD Helicobacter hepaticus ATCC 51449 dihydroorotate dehydrogenase NP_861155.1 1546443 D 235279 CDS NP_861156.1 32267124 1492172 1547880..1549178 1 NC_004917.1 zinc protease 1549178 1492172 HH1625 Helicobacter hepaticus ATCC 51449 zinc protease NP_861156.1 1547880 D 235279 CDS NP_861157.1 32267125 1492173 1549181..1550062 1 NC_004917.1 catalyzes the formation of dihydrodipicolinate from L-aspartate 4-semialdehyde and pyruvate in lysine and diaminopimelate biosynthesis; dihydrodipicolinate synthase 1550062 dapA 1492173 dapA Helicobacter hepaticus ATCC 51449 dihydrodipicolinate synthase NP_861157.1 1549181 D 235279 CDS NP_861158.1 32267126 1492174 1550059..1550862 1 NC_004917.1 Acts on the hydroxyl group at position 7 of the steroid frame; 7-alpha-hydroxysteroid dehydrogenase 1550862 1492174 HH1627 Helicobacter hepaticus ATCC 51449 7-alpha-hydroxysteroid dehydrogenase NP_861158.1 1550059 D 235279 CDS NP_861159.1 32267127 1492175 1551027..1552229 1 NC_004917.1 Transfers the fatty acyl group on membrane lipoproteins; apolipoprotein N-acyltransferase 1552229 1492175 HH1628 Helicobacter hepaticus ATCC 51449 apolipoprotein N-acyltransferase NP_861159.1 1551027 D 235279 CDS NP_861160.1 32267128 1492176 1552335..1553096 1 NC_004917.1 predicted secreted protein; hypothetical protein 1553096 1492176 HH1629 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861160.1 1552335 D 235279 CDS NP_861161.1 32267129 1492177 1553201..1554865 1 NC_004917.1 similar to Campylobacter jejuni CJ1679; hypothetical protein 1554865 1492177 HH1630 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861161.1 1553201 D 235279 CDS NP_861162.1 32267130 1492178 complement(1554891..1556297) 1 NC_004917.1 amino-acid transport protein 1556297 dagA 1492178 dagA Helicobacter hepaticus ATCC 51449 amino-acid transport protein NP_861162.1 1554891 R 235279 CDS NP_861163.1 32267131 1492179 complement(1556472..1557098) 1 NC_004917.1 similar to Escherichia coli YeaS; predicted membrane-associated; hypothetical protein 1557098 1492179 HH1632 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861163.1 1556472 R 235279 CDS NP_861164.1 32267132 1492180 1557237..1559711 1 NC_004917.1 negatively supercoils closed circular double-stranded DNA; DNA gyrase subunit A 1559711 gyrA 1492180 gyrA Helicobacter hepaticus ATCC 51449 DNA gyrase subunit A NP_861164.1 1557237 D 235279 CDS NP_861165.1 32267133 1492181 1559752..1560225 1 NC_004917.1 predicted secreted protein; hypothetical protein 1560225 1492181 HH1634 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861165.1 1559752 D 235279 CDS NP_861166.1 32267134 1492182 1560222..1561532 1 NC_004917.1 transcriptional activator FlgR 1561532 flgR 1492182 flgR Helicobacter hepaticus ATCC 51449 transcriptional activator FlgR NP_861166.1 1560222 D 235279 CDS NP_861167.1 32267135 1492183 1561553..1562074 1 NC_004917.1 predicted secreted protein; hypothetical protein 1562074 1492183 HH1636 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861167.1 1561553 D 235279 CDS NP_861168.1 32267136 1492184 complement(1562121..1562984) 1 NC_004917.1 similar to Vibrio cholerae VC0271; predicted membrane-associated; hypothetical protein 1562984 1492184 HH1637 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861168.1 1562121 R 235279 CDS NP_861169.1 32267137 1492185 complement(1563169..1564134) 1 NC_004917.1 similar to Vibrio cholerae VC0271; predicted membrane-associated; hypothetical protein 1564134 1492185 HH1638 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861169.1 1563169 R 235279 CDS NP_861170.1 32267138 1492186 complement(1564262..1565158) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1565158 1492186 HH1639 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861170.1 1564262 R 235279 CDS NP_861171.1 32267139 1492187 complement(1565151..1566386) 1 NC_004917.1 similar to Helicobacter pylori HP1026; recombination factor protein RarA 1566386 1492187 HH1640 Helicobacter hepaticus ATCC 51449 recombination factor protein RarA NP_861171.1 1565151 R 235279 CDS NP_861172.1 32267140 1492188 complement(1566380..1566757) 1 NC_004917.1 heat shock transcriptional regulator 1566757 hspR 1492188 hspR Helicobacter hepaticus ATCC 51449 heat shock transcriptional regulator NP_861172.1 1566380 R 235279 CDS NP_861173.1 32267141 1492189 complement(1566783..1567676) 1 NC_004917.1 curved DNA-binding protein CbpA 1567676 cbpA 1492189 cbpA Helicobacter hepaticus ATCC 51449 curved DNA-binding protein CbpA NP_861173.1 1566783 R 235279 CDS NP_861174.1 32267142 1492190 1567835..1570750 1 NC_004917.1 recombination protein RecB 1570750 1492190 HH1643 Helicobacter hepaticus ATCC 51449 recombination protein RecB NP_861174.1 1567835 D 235279 CDS NP_861175.1 32267143 1492191 1571029..1572411 1 NC_004917.1 similar to Helicobacter pylori NA(+)/H(+) antiporter 1 jhp1447; hypothetical protein 1572411 1492191 HH1644 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861175.1 1571029 D 235279 CDS NP_861176.1 32267144 1492192 1572432..1573766 1 NC_004917.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; pH-dependent sodium/proton antiporter 1573766 nhaA 1492192 nhaA Helicobacter hepaticus ATCC 51449 pH-dependent sodium/proton antiporter NP_861176.1 1572432 D 235279 CDS NP_861177.1 32267145 1492193 1573817..1574110 1 NC_004917.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; preprotein translocase subunit YajC 1574110 yajC 1492193 yajC Helicobacter hepaticus ATCC 51449 preprotein translocase subunit YajC NP_861177.1 1573817 D 235279 CDS NP_861178.1 32267146 1492194 1574117..1575955 1 NC_004917.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; preprotein translocase subunit SecD 1575955 secD 1492194 secD Helicobacter hepaticus ATCC 51449 preprotein translocase subunit SecD NP_861178.1 1574117 D 235279 CDS NP_861179.1 32267147 1492195 1575959..1576930 1 NC_004917.1 forms a complex with SecD and YajC; SecDFyajC stimulates the proton motive force-driven protein translocation; seems to modulate the cycling of SecA by stabilizing its membrane-inserted state and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; in some organisms, such as Bacillus subtilis, SecD is fused to SecF; preprotein translocase subunit SecF 1576930 secF 1492195 secF Helicobacter hepaticus ATCC 51449 preprotein translocase subunit SecF NP_861179.1 1575959 D 235279 CDS NP_861180.1 32267148 1492196 1576941..1577282 1 NC_004917.1 similar to Helicobacter pylori conserved hypothetical integral membrane protein; hypothetical protein 1577282 1492196 HH1649 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861180.1 1576941 D 235279 CDS NP_861181.1 32267149 1492197 1577318..1578031 1 NC_004917.1 hypothetical protein 1578031 1492197 HH1650 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861181.1 1577318 D 235279 CDS NP_861182.1 32267150 1492198 1578043..1580133 1 NC_004917.1 predicted secreted protein; hypothetical protein 1580133 1492198 HH1651 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861182.1 1578043 D 235279 CDS NP_861183.1 32267151 1492199 complement(1580137..1580598) 1 NC_004917.1 similar to Campylobacter jejuni hydrolase; hypothetical protein 1580598 1492199 HH1652 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861183.1 1580137 R 235279 CDS NP_861184.1 32267152 1492200 1580835..1582361 1 NC_004917.1 FlaA; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin A 1582361 flaA_2 1492200 flaA_2 Helicobacter hepaticus ATCC 51449 flagellin A NP_861184.1 1580835 D 235279 CDS NP_861185.1 32267153 1492201 1582612..1583280 1 NC_004917.1 similar to Escherichia coli YfcA; predicted membrane-associated; hypothetical protein 1583280 1492201 HH1654 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861185.1 1582612 D 235279 CDS NP_861186.1 32267154 1492202 1583353..1583769 1 NC_004917.1 similar to Helicobacter pylori HP0721; predicted secreted protein; hypothetical protein 1583769 1492202 HH1655 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861186.1 1583353 D 235279 CDS NP_861187.1 32267155 1492203 1583821..1584492 1 NC_004917.1 similar to Campylobacter jejuni chemotaxis two-component response regulator CJ1223c; hypothetical protein 1584492 1492203 HH1656 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861187.1 1583821 D 235279 CDS NP_861188.1 32267156 1492204 1584505..1585788 1 NC_004917.1 similar to Campylobacter jejuni chemotaxis two-component histidine kinase CJ1222c; hypothetical protein 1585788 1492204 HH1657 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861188.1 1584505 D 235279 CDS NP_861189.1 32267157 1492205 1585869..1587332 1 NC_004917.1 unwinds double stranded DNA; replicative DNA helicase 1587332 dnaB 1492205 dnaB Helicobacter hepaticus ATCC 51449 replicative DNA helicase NP_861189.1 1585869 D 235279 CDS NP_861190.1 32267158 1492206 1587342..1588679 1 NC_004917.1 similar to Helicobacter pylori competence protein ComE3; hypothetical protein 1588679 1492206 HH1659 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861190.1 1587342 D 235279 CDS NP_861191.1 32267159 1492207 complement(1588652..1589941) 1 NC_004917.1 possible UDP-glucose 6-dehydrogenase; hypothetical protein 1589941 1492207 HH1660 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861191.1 1588652 R 235279 CDS NP_861192.1 32267160 1492208 complement(1589941..1590522) 1 NC_004917.1 possible acyltransferase; hypothetical protein 1590522 1492208 HH1661 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861192.1 1589941 R 235279 CDS NP_861193.1 32267161 1492209 complement(1590519..1591481) 1 NC_004917.1 lipopolysaccharide biosynthesis protein wbpB 1591481 wbpB 1492209 wbpB Helicobacter hepaticus ATCC 51449 lipopolysaccharide biosynthesis protein wbpB NP_861193.1 1590519 R 235279 CDS NP_861194.1 32267162 1492210 complement(1591489..1592415) 1 NC_004917.1 similar to Campylobacter jejuni CJ0404; predicted transmembrane protein; hypothetical protein 1592415 1492210 HH1663 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861194.1 1591489 R 235279 CDS NP_861195.1 32267163 1492211 complement(1592460..1593005) 1 NC_004917.1 similar to Helicobacter pylori HP0184; hypothetical protein 1593005 1492211 HH1664 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861195.1 1592460 R 235279 CDS NP_861196.1 32267164 1492212 complement(1593017..1594267) 1 NC_004917.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; serine hydroxymethyltransferase 1594267 glyA 1492212 glyA Helicobacter hepaticus ATCC 51449 serine hydroxymethyltransferase NP_861196.1 1593017 R 235279 CDS NP_861197.1 32267165 1492213 complement(1594267..1595823) 1 NC_004917.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; lysyl-tRNA synthetase 1595823 lysS 1492213 lysS Helicobacter hepaticus ATCC 51449 lysyl-tRNA synthetase NP_861197.1 1594267 R 235279 CDS NP_861198.1 32267166 1492214 complement(1595836..1596459) 1 NC_004917.1 similar to Helicobacter pylori HP0181; predicted membrane-associated; hypothetical protein 1596459 1492214 HH1667 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861198.1 1595836 R 235279 CDS NP_861199.1 32267167 1492215 1596645..1597541 1 NC_004917.1 UbiA prenyltransferase catalyzes the transfer of a prenyl group to various acceptors with hydrophobic ring structures in the biosynthesis of respiratory quinones, hemes, chlorophylls, vitamin E, and shikonin; prenyltransferase 1597541 ubiA 1492215 ubiA Helicobacter hepaticus ATCC 51449 prenyltransferase NP_861199.1 1596645 D 235279 CDS NP_861200.1 32267168 1492216 1597531..1598097 1 NC_004917.1 hypothetical protein 1598097 1492216 HH1669 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861200.1 1597531 D 235279 CDS NP_861201.1 32267169 1492217 1598101..1598628 1 NC_004917.1 similar to Helicobacter pylori HP1358; predicted membrane-associated; hypothetical protein 1598628 1492217 HH1670 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861201.1 1598101 D 235279 CDS NP_861202.1 32267170 1492218 1598650..1599837 1 NC_004917.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1599837 1492218 HH1671 Helicobacter hepaticus ATCC 51449 aspartate aminotransferase NP_861202.1 1598650 D 235279 CDS NP_861203.1 32267171 1492219 1599841..1601133 1 NC_004917.1 similar to Helicobacter pylori HP0580; predicted membrane-associated; hypothetical protein 1601133 1492219 HH1672 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861203.1 1599841 D 235279 CDS NP_861204.1 32267172 1492220 1601130..1601804 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1601804 1492220 HH1673 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861204.1 1601130 D 235279 CDS NP_861205.1 32267173 1492221 1601878..1603848 1 NC_004917.1 similar to Helicobacter pylori HP0578; predicted membrane-associated; hypothetical protein 1603848 1492221 HH1674 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861205.1 1601878 D 235279 CDS NP_861206.1 32267174 1492222 1603852..1604619 1 NC_004917.1 hypothetical protein 1604619 1492222 HH1675 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861206.1 1603852 D 235279 CDS NP_861207.1 32267175 1492223 1604639..1604773 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; may become fused with HH1677 due to slipped strand mispairing; hypothetical protein 1604773 1492223 HH1676 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861207.1 1604639 D 235279 CDS NP_861208.1 32267176 1492224 1604823..1605452 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; may become fused with HH1676 due to slipped strand mispairing; hypothetical protein 1605452 omp30 1492224 omp30 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861208.1 1604823 D 235279 CDS NP_861209.1 32267177 1492225 complement(1605554..1606231) 1 NC_004917.1 similar to Campylobacter jejuni CJ0186c; predicted membrane-associated; hypothetical protein 1606231 1492225 HH1678 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861209.1 1605554 R 235279 CDS NP_861210.1 32267178 1492226 complement(1606267..1607235) 1 NC_004917.1 Mg and Co transporter 1607235 corA 1492226 corA Helicobacter hepaticus ATCC 51449 Mg and Co transporter NP_861210.1 1606267 R 235279 CDS NP_861211.1 32267179 1492227 1607380..1607925 1 NC_004917.1 phosphatidylglycerophosphate synthase 1607925 pgsA 1492227 pgsA Helicobacter hepaticus ATCC 51449 phosphatidylglycerophosphate synthase NP_861211.1 1607380 D 235279 CDS NP_861212.1 32267180 1492228 1607922..1608977 1 NC_004917.1 similar to Campylobacter jejuni CJ1068; predicted metallopeptidase; hypothetical protein 1608977 1492228 HH1681 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861212.1 1607922 D 235279 CDS NP_861213.1 32267181 1492229 1608987..1609655 1 NC_004917.1 similar to Helicobacter pylori HP0395; hypothetical protein 1609655 1492229 HH1682 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861213.1 1608987 D 235279 CDS NP_861214.1 32267182 1492230 1609652..1610038 1 NC_004917.1 predicted secreted protein; hypothetical protein 1610038 1492230 HH1683 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861214.1 1609652 D 235279 CDS NP_861215.1 32267183 1492231 1610064..1611374 1 NC_004917.1 hypothetical protein 1611374 1492231 HH1684 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861215.1 1610064 D 235279 CDS NP_861216.1 32267184 1492232 1611384..1612118 1 NC_004917.1 similar to Campylobacter jejuni CJ0984; hypothetical protein 1612118 1492232 HH1685 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861216.1 1611384 D 235279 CDS NP_861217.1 32267185 1492233 1612194..1613993 1 NC_004917.1 catalyzes the formation of oxaloacetate from pyruvate; pyruvate carboxylase subunit B 1613993 pycB 1492233 pycB Helicobacter hepaticus ATCC 51449 pyruvate carboxylase subunit B NP_861217.1 1612194 D 235279 CDS NP_861218.1 32267186 1492234 1613968..1615164 1 NC_004917.1 NifS family aminotransferase 1615164 nifS_1 1492234 nifS_1 Helicobacter hepaticus ATCC 51449 NifS family aminotransferase NP_861218.1 1613968 D 235279 CDS NP_861219.1 32267187 1492235 complement(1615161..1618514) 1 NC_004917.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; carbamoyl phosphate synthase large subunit 1618514 carB 1492235 carB Helicobacter hepaticus ATCC 51449 carbamoyl phosphate synthase large subunit NP_861219.1 1615161 R 235279 CDS NP_861220.1 32267188 1492236 1618719..1618895 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1618895 1492236 HH1689 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861220.1 1618719 D 235279 CDS NP_861221.1 32267189 1492237 complement(1618906..1619121) 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1619121 1492237 HH1690 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861221.1 1618906 R 235279 CDS NP_861222.1 32267190 1492238 complement(1619130..1619984) 1 NC_004917.1 produces formate from formyl-tetrahydrofolate which is the major source of formate for PurT in de novo purine nucleotide biosynthesis; has a role in one-carbon metabolism; forms a homohexamer; activated by methionine and inhibited by glycine; formyltetrahydrofolate deformylase 1619984 purU 1492238 purU Helicobacter hepaticus ATCC 51449 formyltetrahydrofolate deformylase NP_861222.1 1619130 R 235279 CDS NP_861223.1 32267191 1492239 complement(1619981..1620865) 1 NC_004917.1 similar to Helicobacter pylori HP1435; predicted protease; hypothetical protein 1620865 1492239 HH1692 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861223.1 1619981 R 235279 CDS NP_861224.1 32267192 1492240 complement(1620888..1621268) 1 NC_004917.1 similar to Campylobacter jejuni CJ1388; hypothetical protein 1621268 1492240 HH1693 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861224.1 1620888 R 235279 CDS NP_861225.1 32267193 1492241 1621338..1621805 1 NC_004917.1 predicted secreted protein; hypothetical protein 1621805 1492241 HH1694 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861225.1 1621338 D 235279 CDS NP_861226.1 32267194 1492242 1621909..1624476 1 NC_004917.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; flagellar hook-associated protein FlgL 1624476 flgL 1492242 flgL Helicobacter hepaticus ATCC 51449 flagellar hook-associated protein FlgL NP_861226.1 1621909 D 235279 CDS NP_861227.1 32267195 1492243 1624473..1625231 1 NC_004917.1 hypothetical protein 1625231 1492243 HH1696 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861227.1 1624473 D 235279 CDS NP_861228.1 32267196 1492244 1625279..1625959 1 NC_004917.1 similar to Campylobacter jejuni chemotaxis two-component response regulator CJ0355c; hypothetical protein 1625959 1492244 HH1697 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861228.1 1625279 D 235279 CDS NP_861229.1 32267197 1492245 complement(1626045..1626146) 1 NC_004917.1 hypothetical protein 1626146 1492245 HH1698 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861229.1 1626045 R 235279 CDS NP_861230.2 161546621 1492246 1626168..1626956 1 NC_004917.1 catalyzes the formation of spermidine from putrescine and S-adenosylmethioninamine; spermidine synthase 1626956 speE 1492246 speE Helicobacter hepaticus ATCC 51449 spermidine synthase NP_861230.2 1626168 D 235279 CDS NP_861231.1 32267199 1492247 1626959..1627582 1 NC_004917.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; dephospho-CoA kinase 1627582 coaE 1492247 coaE Helicobacter hepaticus ATCC 51449 dephospho-CoA kinase NP_861231.1 1626959 D 235279 CDS NP_861232.1 32267200 1492248 1627596..1628390 1 NC_004917.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; diaminopimelate epimerase 1628390 dapF 1492248 dapF Helicobacter hepaticus ATCC 51449 diaminopimelate epimerase NP_861232.1 1627596 D 235279 CDS NP_861233.1 32267201 1492249 complement(1628399..1628650) 1 NC_004917.1 similar to Campylobacter jejuni CJ0667; hypothetical protein 1628650 1492249 HH1702 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861233.1 1628399 R 235279 CDS NP_861234.1 32267202 1492250 complement(1628650..1629099) 1 NC_004917.1 similar to Helicobacter pylori JHP0852; hypothetical protein 1629099 1492250 HH1703 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861234.1 1628650 R 235279 CDS NP_861235.1 32267203 1492251 1629286..1631442 1 NC_004917.1 the hook connects flagellar basal body to the flagellar filament; flagellar hook protein FlgE 1631442 flgE 1492251 flgE Helicobacter hepaticus ATCC 51449 flagellar hook protein FlgE NP_861235.1 1629286 D 235279 CDS NP_861236.1 32267204 1492252 1631612..1632538 1 NC_004917.1 similar to Campylobacter jejuni possible periplasmic protein; hypothetical protein 1632538 1492252 HH1705 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861236.1 1631612 D 235279 CDS NP_861237.1 32267205 1492253 complement(1632561..1633073) 1 NC_004917.1 similar to Helicobacter pylori JHP0273; predicted membrane-associated; hypothetical protein 1633073 1492253 HH1706 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861237.1 1632561 R 235279 CDS NP_861238.1 32267206 1492254 1633186..1634340 1 NC_004917.1 FAD/NAD(P)-binding domain; oxidoreductase 1634340 1492254 HH1707 Helicobacter hepaticus ATCC 51449 oxidoreductase NP_861238.1 1633186 D 235279 CDS NP_861239.1 32267207 1492255 1634237..1635643 1 NC_004917.1 poly(A) polymerase 1635643 pcnB 1492255 pcnB Helicobacter hepaticus ATCC 51449 poly(A) polymerase NP_861239.1 1634237 D 235279 CDS NP_861240.1 32267208 1492256 complement(1635670..1637574) 1 NC_004917.1 similar to Campylobacter jejuni CiaB protein; hypothetical protein 1637574 1492256 HH1709 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861240.1 1635670 R 235279 CDS NP_861241.1 32267209 1492257 1637582..1637674 1 NC_004917.1 hypothetical protein 1637674 1492257 HH1710 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861241.1 1637582 D 235279 CDS NP_861242.1 32267210 1492258 1637704..1638633 1 NC_004917.1 metalloprotease; heat shock protein HtpX 1638633 htpX 1492258 htpX Helicobacter hepaticus ATCC 51449 heat shock protein HtpX NP_861242.1 1637704 D 235279 CDS NP_861243.1 32267211 1492259 1638709..1639329 1 NC_004917.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; GTP cyclohydrolase I 1639329 folE 1492259 folE Helicobacter hepaticus ATCC 51449 GTP cyclohydrolase I NP_861243.1 1638709 D 235279 CDS NP_861244.1 32267212 1492260 1639445..1640572 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1640572 1492260 HH1713 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861244.1 1639445 D 235279 CDS NP_861245.1 32267213 1492261 complement(1640747..1641535) 1 NC_004917.1 similar to Deinococcus radiodurans histidinol phosphatase DR0470; hypothetical protein 1641535 1492261 HH1714 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861245.1 1640747 R 235279 CDS NP_861246.1 32267214 1492262 1641680..1642093 1 NC_004917.1 hypothetical protein 1642093 1492262 HH1715 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861246.1 1641680 D 235279 CDS NP_861247.1 32267215 1492263 1642090..1642713 1 NC_004917.1 similar to Helicobacter pylori HP1485; hypothetical protein 1642713 1492263 HH1716 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861247.1 1642090 D 235279 CDS NP_861248.1 32267216 1492264 1642731..1643171 1 NC_004917.1 similar to Helicobacter pylori HP1484; predicted membrane-associated; hypothetical protein 1643171 1492264 HH1717 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861248.1 1642731 D 235279 CDS NP_861249.1 32267217 1492265 1643182..1644600 1 NC_004917.1 catalyzes the formation of arginine from (N-L-arginino)succinate; argininosuccinate lyase 1644600 argH 1492265 argH Helicobacter hepaticus ATCC 51449 argininosuccinate lyase NP_861249.1 1643182 D 235279 CDS NP_861250.1 32267218 1492266 1644593..1645324 1 NC_004917.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone; ubiquinone/menaquinone biosynthesis methyltransferase 1645324 ubiE 1492266 ubiE Helicobacter hepaticus ATCC 51449 ubiquinone/menaquinone biosynthesis methyltransferase NP_861250.1 1644593 D 235279 CDS NP_861251.1 32267219 1492267 1645523..1647007 1 NC_004917.1 malate dehydrogenase; catalyzes the oxidation of malate to oxaloacetate; malate:quinone oxidoreductase 1647007 1492267 HH1720 Helicobacter hepaticus ATCC 51449 malate:quinone oxidoreductase NP_861251.1 1645523 D 235279 CDS NP_861252.1 32267220 1492268 1647128..1648438 1 NC_004917.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; histidinol dehydrogenase 1648438 hisD 1492268 hisD Helicobacter hepaticus ATCC 51449 histidinol dehydrogenase NP_861252.1 1647128 D 235279 CDS NP_861253.1 32267221 1492269 1648442..1648705 1 NC_004917.1 similar to Campylobacter jejuni CJ0539; hypothetical protein 1648705 1492269 HH1722 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861253.1 1648442 D 235279 CDS NP_861254.1 32267222 1492270 1648698..1649174 1 NC_004917.1 similar to Helicobacter pylori HP0242; hypothetical protein 1649174 1492270 HH1723 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861254.1 1648698 D 235279 CDS NP_861255.1 32267223 1492271 1649171..1650082 1 NC_004917.1 possible geranyl transferase; hypothetical protein 1650082 1492271 HH1724 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861255.1 1649171 D 235279 CDS NP_861256.1 32267224 1492272 1650093..1651415 1 NC_004917.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; glutamyl-tRNA reductase 1651415 hemA 1492272 hemA Helicobacter hepaticus ATCC 51449 glutamyl-tRNA reductase NP_861256.1 1650093 D 235279 CDS NP_861257.1 32267225 1492273 1651425..1653191 1 NC_004917.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); prolyl-tRNA synthetase 1653191 proS 1492273 proS Helicobacter hepaticus ATCC 51449 prolyl-tRNA synthetase NP_861257.1 1651425 D 235279 CDS NP_861258.1 32267226 1492274 1653201..1654166 1 NC_004917.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; porphobilinogen deaminase 1654166 hemC 1492274 hemC Helicobacter hepaticus ATCC 51449 porphobilinogen deaminase NP_861258.1 1653201 D 235279 CDS NP_861259.1 32267227 1492275 complement(1654306..1654410) 1 NC_004917.1 hypothetical protein 1654410 1492275 HH1728 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861259.1 1654306 R 235279 CDS NP_861260.1 32267228 1492276 1654478..1654918 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1654918 1492276 HH1729 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861260.1 1654478 D 235279 CDS NP_861261.1 32267229 1492277 complement(1654971..1655858) 1 NC_004917.1 tRNA-processing ribonuclease BN 1655858 rbn 1492277 rbn Helicobacter hepaticus ATCC 51449 tRNA-processing ribonuclease BN NP_861261.1 1654971 R 235279 CDS NP_861262.1 32267230 1492278 complement(1655870..1656721) 1 NC_004917.1 catalyzes the formation of biotin from dethiobiotin and sulfur; biotin synthase 1656721 bioB 1492278 bioB Helicobacter hepaticus ATCC 51449 biotin synthase NP_861262.1 1655870 R 235279 CDS NP_861263.1 32267231 1492279 1656817..1658070 1 NC_004917.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; exodeoxyribonuclease VII large subunit 1658070 xseA 1492279 xseA Helicobacter hepaticus ATCC 51449 exodeoxyribonuclease VII large subunit NP_861263.1 1656817 D 235279 CDS NP_861264.1 32267232 1492280 complement(1658084..1658776) 1 NC_004917.1 hypothetical protein 1658776 1492280 HH1733 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861264.1 1658084 R 235279 CDS NP_861265.1 32267233 1492281 complement(1658852..1659745) 1 NC_004917.1 selenophosphate synthase 1659745 selD 1492281 selD Helicobacter hepaticus ATCC 51449 selenophosphate synthase NP_861265.1 1658852 R 235279 CDS NP_861266.1 32267234 1492282 1659762..1659869 1 NC_004917.1 hypothetical protein 1659869 1492282 HH1735 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861266.1 1659762 D 235279 CDS NP_861267.1 32267235 1492283 complement(1659908..1660522) 1 NC_004917.1 similar to Campylobacter jejuni CJ1505c; hypothetical protein 1660522 1492283 HH1736 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861267.1 1659908 R 235279 CDS NP_861268.1 32267236 1492284 complement(1660705..1663284) 1 NC_004917.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 1663284 acnB 1492284 acnB Helicobacter hepaticus ATCC 51449 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase NP_861268.1 1660705 R 235279 CDS NP_861269.1 32267237 1492285 1663392..1663628 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1663628 1492285 HH1738 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861269.1 1663392 D 235279 CDS NP_861270.1 32267238 1492286 1663628..1665055 1 NC_004917.1 similar to Helicobacter pylori HP0405; predicted NifS-like protein; hypothetical protein 1665055 nifS_2 1492286 nifS_2 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861270.1 1663628 D 235279 CDS NP_861271.1 32267239 1492287 complement(1665135..1666991) 1 NC_004917.1 molecular chaperone; heat shock protein 90 1666991 htpG 1492287 htpG Helicobacter hepaticus ATCC 51449 heat shock protein 90 NP_861271.1 1665135 R 235279 CDS NP_861272.1 32267240 1492288 1667185..1668099 1 NC_004917.1 similar to Campylobacter jejuni CJ1618c; hypothetical protein 1668099 1492288 HH1741 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861272.1 1667185 D 235279 CDS NP_861273.1 32267241 1492289 1668186..1669325 1 NC_004917.1 predicted secreted protein; hypothetical protein 1669325 1492289 HH1742 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861273.1 1668186 D 235279 CDS NP_861274.1 32267242 1492290 1669344..1670603 1 NC_004917.1 predicted secreted protein; hypothetical protein 1670603 1492290 HH1743 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861274.1 1669344 D 235279 CDS NP_861275.2 161546620 1492291 1670762..1670965 1 NC_004917.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster do not have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; 50S ribosomal protein L31 1670965 rpmE 1492291 rpmE Helicobacter hepaticus ATCC 51449 50S ribosomal protein L31 NP_861275.2 1670762 D 235279 CDS NP_861276.1 32267244 1492292 1670970..1671830 1 NC_004917.1 hypothetical protein 1671830 1492292 HH1745 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861276.1 1670970 D 235279 CDS NP_861277.1 32267245 1492293 1671835..1672524 1 NC_004917.1 possible rRNA methylase; hypothetical protein 1672524 1492293 HH1746 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861277.1 1671835 D 235279 CDS NP_861278.1 32267246 1492294 1672511..1673668 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1673668 1492294 HH1747 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861278.1 1672511 D 235279 CDS NP_861279.1 32267247 1492295 1673662..1674471 1 NC_004917.1 similar to Helicobacter pylori HP0555; predicted secreted protein; hypothetical protein 1674471 1492295 HH1748 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861279.1 1673662 D 235279 CDS NP_861280.1 32267248 1492296 1674507..1675715 1 NC_004917.1 catalyzes the formation of oxalozcetate and L-glutamate from L-aspartate and 2-oxoglutarate; aspartate aminotransferase 1675715 1492296 HH1749 Helicobacter hepaticus ATCC 51449 aspartate aminotransferase NP_861280.1 1674507 D 235279 CDS NP_861281.1 32267249 1492297 1675725..1677020 1 NC_004917.1 catalyzes the formation of L-aspartate 4-semialdehyde from L-homoserine; homoserine dehydrogenase 1677020 hom 1492297 hom Helicobacter hepaticus ATCC 51449 homoserine dehydrogenase NP_861281.1 1675725 D 235279 CDS NP_861282.1 32267250 1492298 1677044..1677376 1 NC_004917.1 similar to Helicobacter pylori HP0823; hypothetical protein 1677376 1492298 HH1751 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861282.1 1677044 D 235279 CDS NP_861283.1 32267251 1492299 complement(1677385..1677771) 1 NC_004917.1 hypothetical protein 1677771 1492299 HH1752 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861283.1 1677385 R 235279 CDS NP_861284.1 32267252 1492300 complement(1677761..1678234) 1 NC_004917.1 hypothetical protein 1678234 1492300 HH1753 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861284.1 1677761 R 235279 CDS NP_861285.1 32267253 1492301 1678266..1678358 1 NC_004917.1 hypothetical protein 1678358 1492301 HH1754 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861285.1 1678266 D 235279 CDS NP_861286.1 32267254 1492302 complement(1678355..1678816) 1 NC_004917.1 predicted secreted protein; hypothetical protein 1678816 1492302 HH1755 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861286.1 1678355 R 235279 CDS NP_861287.1 32267255 1492303 complement(1678833..1681379) 1 NC_004917.1 serine/threonine protein phosphatase 1681379 1492303 HH1756 Helicobacter hepaticus ATCC 51449 serine/threonine protein phosphatase NP_861287.1 1678833 R 235279 CDS NP_861288.1 32267256 1492304 complement(1681415..1681606) 1 NC_004917.1 similar to Helicobacter pylori HP0085; predicted secreted protein; hypothetical protein 1681606 1492304 HH1757 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861288.1 1681415 R 235279 CDS NP_861289.1 32267257 1492305 complement(1681603..1682415) 1 NC_004917.1 similar to Campylobacter jejuni CJ0141c; possible ABC transporter; hypothetical protein 1682415 1492305 HH1758 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861289.1 1681603 R 235279 CDS NP_861290.1 32267258 1492306 complement(1682408..1683139) 1 NC_004917.1 ATP-binding protein; ABC transporter 1683139 fecE 1492306 fecE Helicobacter hepaticus ATCC 51449 ABC transporter NP_861290.1 1682408 R 235279 CDS NP_861291.1 32267259 1492307 complement(1683143..1684012) 1 NC_004917.1 similar to Campylobacter jejuni CJ0143c; predicted periplasmic solute binding protein for ABC transport system; hypothetical protein 1684012 1492307 HH1760 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861291.1 1683143 R 235279 CDS NP_861292.1 32267260 1492308 complement(1684009..1685379) 1 NC_004917.1 similar to Helicobacter pylori HP0087; predicted secreted protein; hypothetical protein 1685379 1492308 HH1761 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861292.1 1684009 R 235279 CDS NP_861293.1 32267261 1492309 complement(1685380..1685763) 1 NC_004917.1 similar to Campylobacter jejuni CJ0717; hypothetical protein 1685763 1492309 HH1762 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861293.1 1685380 R 235279 CDS NP_861294.1 32267262 1492310 complement(1685775..1686275) 1 NC_004917.1 phosphotyrosine protein phosphatase 1686275 1492310 HH1763 Helicobacter hepaticus ATCC 51449 phosphotyrosine protein phosphatase NP_861294.1 1685775 R 235279 CDS NP_861295.1 32267263 1492311 complement(1686272..1687546) 1 NC_004917.1 Catalyzes the hydrolytic cleavage of a carbon-halogen bond in N-ethylammeline; chlorohydrolase 1687546 1492311 HH1764 Helicobacter hepaticus ATCC 51449 chlorohydrolase NP_861295.1 1686272 R 235279 CDS NP_861296.1 32267264 1492312 complement(1687546..1688370) 1 NC_004917.1 similar to Helicobacter pylori HP0983; predicted membrane-associated; hypothetical protein 1688370 1492312 HH1765 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861296.1 1687546 R 235279 CDS NP_861297.1 32267265 1492313 complement(1688370..1689650) 1 NC_004917.1 Catalyzes the reversible hydrolysis of the amide bond within dihydroorotate. This metabolic intermediate is required for the biosynthesis of pyrimidine nucleotides; dihydroorotase 1689650 pyrC_1 1492313 pyrC_1 Helicobacter hepaticus ATCC 51449 dihydroorotase NP_861297.1 1688370 R 235279 CDS NP_861298.1 32267266 1492314 complement(1689652..1690392) 1 NC_004917.1 cytochrome c biogenesis protein CcdA 1690392 ccdA 1492314 ccdA Helicobacter hepaticus ATCC 51449 cytochrome c biogenesis protein CcdA NP_861298.1 1689652 R 235279 CDS NP_861299.1 32267267 1492315 1690505..1692097 1 NC_004917.1 ATP-dependent RNA helicase DeaD 1692097 deaD 1492315 deaD Helicobacter hepaticus ATCC 51449 ATP-dependent RNA helicase DeaD NP_861299.1 1690505 D 235279 CDS NP_861300.1 32267268 1492316 1692110..1692691 1 NC_004917.1 hypothetical protein 1692691 1492316 HH1769 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861300.1 1692110 D 235279 CDS NP_861301.1 32267269 1492317 complement(1692710..1693534) 1 NC_004917.1 similar to Helicobacter pylori JHP0739; predicted membrane-associated; hypothetical protein 1693534 1492317 HH1770 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861301.1 1692710 R 235279 CDS NP_861302.1 32267270 1492318 1693612..1694184 1 NC_004917.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; adenylate kinase 1694184 adk 1492318 adk Helicobacter hepaticus ATCC 51449 adenylate kinase NP_861302.1 1693612 D 235279 CDS NP_861303.1 32267271 1492319 1694417..1696096 1 NC_004917.1 GTP-binding protein 1696096 yihK 1492319 yihK Helicobacter hepaticus ATCC 51449 GTP-binding protein NP_861303.1 1694417 D 235279 CDS NP_861304.1 32267272 1492320 1696168..1696791 1 NC_004917.1 similar to Helicobacter pylori HP0642 (FrxA); predicted nitroreductase; hypothetical protein 1696791 frxA 1492320 frxA Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861304.1 1696168 D 235279 CDS NP_861305.1 32267273 1492321 1696801..1699176 1 NC_004917.1 Catalyzes the rate-limiting step in dNTP synthesis; ribonucleotide-diphosphate reductase subunit alpha 1699176 nrdA 1492321 nrdA Helicobacter hepaticus ATCC 51449 ribonucleotide-diphosphate reductase subunit alpha NP_861305.1 1696801 D 235279 CDS NP_861306.1 32267274 1492322 1699244..1699597 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1699597 1492322 HH1775 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861306.1 1699244 D 235279 CDS NP_861307.1 32267275 1492323 complement(1699537..1700616) 1 NC_004917.1 alpha-1,3-fucosyltransferase 1700616 1492323 HH1776 Helicobacter hepaticus ATCC 51449 alpha-1,3-fucosyltransferase NP_861307.1 1699537 R 235279 CDS NP_861308.1 32267276 1492324 complement(1700613..1701680) 1 NC_004917.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; peptide chain release factor 1 1701680 prfA 1492324 prfA Helicobacter hepaticus ATCC 51449 peptide chain release factor 1 NP_861308.1 1700613 R 235279 CDS NP_861309.2 161546619 1492325 complement(1701706..1701978) 1 NC_004917.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; 30S ribosomal protein S20 1701978 rpsT 1492325 rpsT Helicobacter hepaticus ATCC 51449 30S ribosomal protein S20 NP_861309.2 1701706 R 235279 CDS NP_861310.1 32267278 1492326 1702066..1703427 1 NC_004917.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; phosphoglucosamine mutase 1703427 glmM 1492326 glmM Helicobacter hepaticus ATCC 51449 phosphoglucosamine mutase NP_861310.1 1702066 D 235279 CDS NP_861311.1 32267279 1492327 1703450..1703950 1 NC_004917.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; lipoprotein signal peptidase 1703950 lspA 1492327 lspA Helicobacter hepaticus ATCC 51449 lipoprotein signal peptidase NP_861311.1 1703450 D 235279 CDS NP_861312.1 32267280 1492328 1704224..1705066 1 NC_004917.1 predicted secreted protein; hypothetical protein 1705066 1492328 HH1781 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861312.1 1704224 D 235279 CDS NP_861313.1 32267281 1492329 1705076..1705948 1 NC_004917.1 predicted secreted protein; hypothetical protein 1705948 1492329 HH1782 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861313.1 1705076 D 235279 CDS NP_861314.1 32267282 1492330 1706005..1706241 1 NC_004917.1 similar to Campylobacter jejuni CJ0916c; hypothetical protein 1706241 1492330 HH1783 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861314.1 1706005 D 235279 CDS NP_861315.1 32267283 1492331 1706321..1707373 1 NC_004917.1 permease OppB; oligopeptide ABC transporter 1707373 oppB 1492331 oppB Helicobacter hepaticus ATCC 51449 oligopeptide ABC transporter NP_861315.1 1706321 D 235279 CDS NP_861316.1 32267284 1492332 1707366..1708433 1 NC_004917.1 permease OppC; oligopeptide ABC transporter 1708433 oppC 1492332 oppC Helicobacter hepaticus ATCC 51449 oligopeptide ABC transporter NP_861316.1 1707366 D 235279 CDS NP_861317.1 32267285 1492333 1708549..1710003 1 NC_004917.1 ATP-binding protein OppD; oligopeptide ABC transporter 1710003 oppD 1492333 oppD Helicobacter hepaticus ATCC 51449 oligopeptide ABC transporter NP_861317.1 1708549 D 235279 CDS NP_861318.1 32267286 1492334 1709942..1710655 1 NC_004917.1 3-methyladenine DNA glycosylase 1710655 magIII 1492334 magIII Helicobacter hepaticus ATCC 51449 3-methyladenine DNA glycosylase NP_861318.1 1709942 D 235279 CDS NP_861319.1 32267287 1492335 1710683..1711123 1 NC_004917.1 hypothetical protein 1711123 1492335 HH1788 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861319.1 1710683 D 235279 CDS NP_861320.1 32267288 1492336 1711202..1711333 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1711333 1492336 HH1789 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861320.1 1711202 D 235279 CDS NP_861321.1 32267289 1492337 1711412..1711690 1 NC_004917.1 predicted secreted protein; hypothetical protein 1711690 1492337 HH1790 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861321.1 1711412 D 235279 CDS NP_861322.1 32267290 1492338 1711838..1712500 1 NC_004917.1 hypothetical protein 1712500 1492338 HH1791 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861322.1 1711838 D 235279 CDS NP_861323.1 32267291 1492339 1712563..1713408 1 NC_004917.1 Catalyzes the reversible hydration of fumaric acid to yield I-malic acid; fumarate hydratase 1713408 ttdA 1492339 ttdA Helicobacter hepaticus ATCC 51449 fumarate hydratase NP_861323.1 1712563 D 235279 CDS NP_861324.1 32267292 1492340 1713419..1713976 1 NC_004917.1 beta subunit; fumarate hydratase 1713976 ttdB 1492340 ttdB Helicobacter hepaticus ATCC 51449 fumarate hydratase NP_861324.1 1713419 D 235279 CDS NP_861325.1 32267293 1492341 1714136..1714438 1 NC_004917.1 hypothetical protein 1714438 1492341 HH1794 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861325.1 1714136 D 235279 CDS NP_861326.1 32267294 1492342 complement(1715100..1717001) 1 NC_004917.1 similar to Campylobacter jejuni CJ1337; predicted secreted protein; hypothetical protein 1717001 1492342 HH1795 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861326.1 1715100 R 235279 CDS NP_861327.1 32267295 1492343 complement(1717033..1718577) 1 NC_004917.1 FlaB; structural flagella protein; in Helicobacter flagella are composed of flagellin A and flagellin B; the amounts of each seem to be controlled by environmental conditions; flagellin B 1718577 flaB 1492343 flaB Helicobacter hepaticus ATCC 51449 flagellin B NP_861327.1 1717033 R 235279 CDS NP_861328.1 32267296 1492344 complement(1718603..1718710) 1 NC_004917.1 hypothetical protein 1718710 1492344 HH1797 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861328.1 1718603 R 235279 CDS NP_861329.1 32267297 1492345 1718740..1720989 1 NC_004917.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; DNA topoisomerase I 1720989 topA 1492345 topA Helicobacter hepaticus ATCC 51449 DNA topoisomerase I NP_861329.1 1718740 D 235279 CDS NP_861330.1 32267298 1492346 1721226..1721777 1 NC_004917.1 similar to Helicobacter pylori Hop-family proteins; hypothetical protein 1721777 1492346 HH1799 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861330.1 1721226 D 235279 CDS NP_861331.1 32267299 1492347 complement(1721952..1722263) 1 NC_004917.1 similar to Thermotoga maritima TM0763; hypothetical protein 1722263 1492347 HH1800 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861331.1 1721952 R 235279 CDS NP_861332.1 32267300 1492348 complement(1722273..1724018) 1 NC_004917.1 catalyzes a two-step reaction, first charging an aspartate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; aspartyl-tRNA synthetase 1724018 aspS 1492348 aspS Helicobacter hepaticus ATCC 51449 aspartyl-tRNA synthetase NP_861332.1 1722273 R 235279 CDS NP_861333.1 32267301 1492349 complement(1724067..1725035) 1 NC_004917.1 similar to Helicobacter pylori HP0616 (CheV2); chemotaxis signal transduction protein CheV 1725035 cheV_2 1492349 cheV_2 Helicobacter hepaticus ATCC 51449 chemotaxis signal transduction protein CheV NP_861333.1 1724067 R 235279 CDS NP_861334.1 32267302 1492350 1725150..1727102 1 NC_004917.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; NAD-dependent DNA ligase LigA 1727102 ligA 1492350 ligA Helicobacter hepaticus ATCC 51449 NAD-dependent DNA ligase LigA NP_861334.1 1725150 D 235279 CDS NP_861335.1 32267303 1492351 complement(1727109..1727717) 1 NC_004917.1 similar to Helicobacter pylori HP1029; hypothetical protein 1727717 1492351 HH1804 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861335.1 1727109 R 235279 CDS NP_861336.1 32267304 1492352 complement(1727735..1728913) 1 NC_004917.1 dapE-encoded N-succinyl-L,L-diaminopimelic acid desuccinylase (DapE), catalyzes the hydrolysis of N-succinyl-L,Ldiaminopimelate L,L-SDAP to L,L-diaminopimelate and succinate. It is a metalloprotease containing dinuclear active sites. Its structure is similar to the carboxypeptidase G2 from Pseudomonas sp. strain RS-16 and the aminopeptidase from Aeromonas proteolytica.; succinyl-diaminopimelate desuccinylase 1728913 dapE 1492352 dapE Helicobacter hepaticus ATCC 51449 succinyl-diaminopimelate desuccinylase NP_861336.1 1727735 R 235279 CDS NP_861337.1 32267305 1492353 complement(1728915..1729301) 1 NC_004917.1 hypothetical protein 1729301 1492353 HH1806 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861337.1 1728915 R 235279 CDS NP_861338.1 32267306 1492354 complement(1729294..1729920) 1 NC_004917.1 similar to Pseudomonas aeruginosa PA1644; hypothetical protein 1729920 1492354 HH1807 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861338.1 1729294 R 235279 CDS NP_861339.1 32267307 1492355 complement(1729917..1731149) 1 NC_004917.1 ADP-heptose:LPS heptosyltransferase 1731149 1492355 HH1808 Helicobacter hepaticus ATCC 51449 ADP-heptose:LPS heptosyltransferase NP_861339.1 1729917 R 235279 CDS NP_861340.1 32267308 1492356 1731325..1732653 1 NC_004917.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; histidyl-tRNA synthetase 1732653 hisS 1492356 hisS Helicobacter hepaticus ATCC 51449 histidyl-tRNA synthetase NP_861340.1 1731325 D 235279 CDS NP_861341.1 32267309 1492357 1732655..1734511 1 NC_004917.1 oligoendopeptidase PepF 1734511 pepF 1492357 pepF Helicobacter hepaticus ATCC 51449 oligoendopeptidase PepF NP_861341.1 1732655 D 235279 CDS NP_861342.1 32267310 1492358 1734480..1734971 1 NC_004917.1 similar to Campylobacter jejuni CJ1100; hypothetical protein 1734971 1492358 HH1811 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861342.1 1734480 D 235279 CDS NP_861343.1 32267311 1492359 1735054..1735722 1 NC_004917.1 similar to Helicobacter pylori JHP0420; hypothetical protein 1735722 1492359 HH1812 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861343.1 1735054 D 235279 CDS NP_861344.1 32267312 1492360 1735740..1736555 1 NC_004917.1 similar to Helicobacter pylori JHP0420; hypothetical protein 1736555 1492360 HH1813 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861344.1 1735740 D 235279 CDS NP_861345.1 32267313 1492361 1736556..1736864 1 NC_004917.1 similar to Helicobacter pylori HP0467; predicted membrane-associated; hypothetical protein 1736864 1492361 HH1814 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861345.1 1736556 D 235279 CDS NP_861346.1 32267314 1492362 1736919..1737806 1 NC_004917.1 similar to Helicobacter pylori HP0466; hypothetical protein 1737806 1492362 HH1815 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861346.1 1736919 D 235279 CDS NP_861347.1 32267315 1492363 1737851..1738348 1 NC_004917.1 hypothetical protein 1738348 1492363 HH1816 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861347.1 1737851 D 235279 CDS NP_861348.1 32267316 1492364 complement(1738356..1738775) 1 NC_004917.1 similar to Campylobacter jejuni CJ0436; hypothetical protein 1738775 1492364 HH1817 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861348.1 1738356 R 235279 CDS NP_861349.1 32267317 1492365 complement(1738784..1739281) 1 NC_004917.1 thiol peroxidase 1739281 tpx 1492365 tpx Helicobacter hepaticus ATCC 51449 thiol peroxidase NP_861349.1 1738784 R 235279 CDS NP_861350.1 32267318 1492366 1739349..1740782 1 NC_004917.1 phosphate starvation-inducible protein PhoH; hypothetical protein 1740782 phoH 1492366 phoH Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861350.1 1739349 D 235279 CDS NP_861351.1 32267319 1492367 1740779..1741489 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1741489 1492367 HH1820 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861351.1 1740779 D 235279 CDS NP_861352.1 32267320 1492368 1741519..1742238 1 NC_004917.1 predicted lipoprotein; hypothetical protein 1742238 1492368 HH1821 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861352.1 1741519 D 235279 CDS NP_861353.1 32267321 1492369 1742338..1742661 1 NC_004917.1 similar to Campylobacter jejuni CJ1429c; may become fused with HH1823 due to slipped strand mispairing; hypothetical protein 1742661 1492369 HH1822 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861353.1 1742338 D 235279 CDS NP_861354.1 32267322 1492370 1742726..1743280 1 NC_004917.1 similar to Campylobacter jejuni CJ1429c; may become fused with HH1822 due to slipped strand mispairing; hypothetical protein 1743280 1492370 HH1823 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861354.1 1742726 D 235279 CDS NP_861355.1 32267323 1492371 complement(1743351..1745780) 1 NC_004917.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; phosphoenolpyruvate synthase 1745780 ppsA 1492371 ppsA Helicobacter hepaticus ATCC 51449 phosphoenolpyruvate synthase NP_861355.1 1743351 R 235279 CDS NP_861356.1 32267324 1492372 1745942..1748179 1 NC_004917.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; phosphoribosylformylglycinamidine synthase II 1748179 purL 1492372 purL Helicobacter hepaticus ATCC 51449 phosphoribosylformylglycinamidine synthase II NP_861356.1 1745942 D 235279 CDS NP_861357.1 32267325 1492373 1748192..1748740 1 NC_004917.1 predicted secreted protein; hypothetical protein 1748740 1492373 HH1826 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861357.1 1748192 D 235279 CDS NP_861358.1 32267326 1492374 complement(1748798..1750264) 1 NC_004917.1 similar to Helicobacter pylori HP0235; hypothetical protein 1750264 1492374 HH1827 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861358.1 1748798 R 235279 CDS NP_861359.1 32267327 1492375 complement(1750328..1750972) 1 NC_004917.1 thiamine monophosphate synthase 1750972 thiE 1492375 thiE Helicobacter hepaticus ATCC 51449 thiamine monophosphate synthase NP_861359.1 1750328 R 235279 CDS NP_861360.1 32267328 1492376 complement(1750979..1751704) 1 NC_004917.1 Conjugates Arg from its aminoacyl-tRNA to the N-termini of proteins containing an N-terminal aspartate or glutamate; arginyl-tRNA-protein transferase 1751704 1492376 HH1829 Helicobacter hepaticus ATCC 51449 arginyl-tRNA-protein transferase NP_861360.1 1750979 R 235279 CDS NP_861361.1 32267329 1492377 complement(1751701..1752927) 1 NC_004917.1 membrane-bound lytic murein transglycosylase C (MltC) 1752927 mltC 1492377 mltC Helicobacter hepaticus ATCC 51449 membrane-bound lytic murein transglycosylase C (MltC) NP_861361.1 1751701 R 235279 CDS NP_861362.1 32267330 1492378 1753076..1754008 1 NC_004917.1 similar to Helicobacter pylori HP0117; hypothetical protein 1754008 1492378 HH1831 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861362.1 1753076 D 235279 CDS NP_861363.1 32267331 1492379 1754121..1754756 1 NC_004917.1 superoxide dismutase 1754756 sodF 1492379 sodF Helicobacter hepaticus ATCC 51449 superoxide dismutase NP_861363.1 1754121 D 235279 CDS NP_861364.1 32267332 1492380 1754869..1755699 1 NC_004917.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; nicotinate-nucleotide pyrophosphorylase 1755699 nadC 1492380 nadC Helicobacter hepaticus ATCC 51449 nicotinate-nucleotide pyrophosphorylase NP_861364.1 1754869 D 235279 CDS NP_861365.1 32267333 1492381 1755703..1756704 1 NC_004917.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; thiamine monophosphate kinase 1756704 thiL 1492381 thiL Helicobacter hepaticus ATCC 51449 thiamine monophosphate kinase NP_861365.1 1755703 D 235279 CDS NP_861366.1 32267334 1492382 1756714..1757430 1 NC_004917.1 similar to Campylobacter jejuni CJ1374c; hypothetical protein 1757430 1492382 HH1835 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861366.1 1756714 D 235279 CDS NP_861367.1 32267335 1492383 1757518..1759320 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1759320 1492383 HH1836 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861367.1 1757518 D 235279 CDS NP_861368.1 32267336 1492384 1759343..1759915 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1759915 1492384 HH1837 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861368.1 1759343 D 235279 CDS NP_861369.1 32267337 1492385 1759912..1760697 1 NC_004917.1 catalyzes the decarboxylaton of phospatidyl-L-sering to phosphatidylethanolamine; phosphatidylserine decarboxylase 1760697 psd 1492385 psd Helicobacter hepaticus ATCC 51449 phosphatidylserine decarboxylase NP_861369.1 1759912 D 235279 CDS NP_861370.1 32267338 1492386 1760723..1761736 1 NC_004917.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; quinolinate synthetase 1761736 nadA 1492386 nadA Helicobacter hepaticus ATCC 51449 quinolinate synthetase NP_861370.1 1760723 D 235279 CDS NP_861371.1 32267339 1492387 1761899..1762396 1 NC_004917.1 predicted membrane-associated; hypothetical protein 1762396 1492387 HH1840 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861371.1 1761899 D 235279 CDS NP_861372.1 32267340 1492388 1762366..1762698 1 NC_004917.1 hypothetical protein 1762698 1492388 HH1841 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861372.1 1762366 D 235279 CDS NP_861373.1 32267341 1492389 complement(1762706..1763782) 1 NC_004917.1 in most organisms, only the N-terminal domain is present in a single polypeptide; in some archaea this domain is fused to a kinase domain; this gene is essential for growth in Escherichia coli and Bacillus subtilis; the secreted glycoprotease from Pasteurella haemolytica showed specificity for O-sialoglycosylated proteins; the Pyrococcus structure shows DNA-binding properties, iron-binding, ATP-binding, and AP endonuclease activity; DNA-binding/iron metalloprotein/AP endonuclease 1763782 gcp 1492389 gcp Helicobacter hepaticus ATCC 51449 DNA-binding/iron metalloprotein/AP endonuclease NP_861373.1 1762706 R 235279 CDS NP_861374.1 32267342 1492390 1763848..1764960 1 NC_004917.1 similar to Campylobacter jejuni CJ0949c; hypothetical protein 1764960 1492390 HH1843 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861374.1 1763848 D 235279 CDS NP_861375.1 32267343 1492391 complement(1765098..1765667) 1 NC_004917.1 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ 1765667 thiJ 1492391 thiJ Helicobacter hepaticus ATCC 51449 4-methyl-5(beta-hydroxyethyl)-thiazole monophosphate synthesis protein ThiJ NP_861375.1 1765098 R 235279 CDS NP_861376.1 32267344 1492392 1765915..1767003 1 NC_004917.1 integrase/recombinase XerD 1767003 xerD 1492392 xerD Helicobacter hepaticus ATCC 51449 integrase/recombinase XerD NP_861376.1 1765915 D 235279 CDS NP_861377.1 32267345 1492393 1767013..1767570 1 NC_004917.1 similar to Helicobacter pylori HP1580; predicted membrane-associated; hypothetical protein 1767570 1492393 HH1846 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861377.1 1767013 D 235279 CDS NP_861378.1 32267346 1492394 1768331..1770379 1 NC_004917.1 iron-regulated outer membrane protein FrpB 1770379 frpB 1492394 frpB Helicobacter hepaticus ATCC 51449 iron-regulated outer membrane protein FrpB NP_861378.1 1768331 D 235279 CDS NP_861379.1 32267347 1492395 1770458..1770958 1 NC_004917.1 catalyzes the hydrolysis of pyrophosphate; inorganic pyrophosphatase 1770958 ppa 1492395 ppa Helicobacter hepaticus ATCC 51449 inorganic pyrophosphatase NP_861379.1 1770458 D 235279 CDS NP_861380.1 32267348 1492396 1770994..1772418 1 NC_004917.1 biotin carboxylase; catalyses the carboxylation of the carrier protein which then transfers the carboxyl group to form malonyl-CoA, which in turn controls the rate of fatty acid metabolism; acetyl-CoA carboxylase subunit A 1772418 1492396 HH1849 Helicobacter hepaticus ATCC 51449 acetyl-CoA carboxylase subunit A NP_861380.1 1770994 D 235279 CDS NP_861381.1 32267349 1492397 1772435..1773868 1 NC_004917.1 similar to Helicobacter pylori HP1363; hypothetical protein 1773868 1492397 HH1850 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861381.1 1772435 D 235279 CDS NP_861382.1 32267350 1492398 1773865..1774656 1 NC_004917.1 functions in thiamine (vitamin B1) biosynthesis; in Bacillus subtilis this enzyme catalyzes the formation of thiazole from dehydroxyglycine and 1-deoxy-D-xylulose-5-phosphate and ThiS-thiocarboxylate; thiazole synthase 1774656 thiG 1492398 thiG Helicobacter hepaticus ATCC 51449 thiazole synthase NP_861382.1 1773865 D 235279 CDS NP_861383.1 32267351 1492399 1774672..1775391 1 NC_004917.1 similar to Campylobacter jejuni CJ0590; hypothetical protein 1775391 1492399 HH1852 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861383.1 1774672 D 235279 CDS NP_861384.1 32267352 1492400 1775563..1776204 1 NC_004917.1 hypothetical protein 1776204 1492400 HH1853 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861384.1 1775563 D 235279 CDS NP_861385.1 32267353 1492401 1776268..1776993 1 NC_004917.1 hypothetical protein 1776993 1492401 HH1854 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861385.1 1776268 D 235279 CDS NP_861386.1 32267354 1492402 1776997..1777635 1 NC_004917.1 similar to Escherichia coli ECS2092; predicted secreted protein; hypothetical protein 1777635 1492402 HH1855 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861386.1 1776997 D 235279 CDS NP_861387.1 32267355 1492403 complement(1777647..1778864) 1 NC_004917.1 ATP-binding component; ABC transporter 1778864 1492403 HH1856 Helicobacter hepaticus ATCC 51449 ABC transporter NP_861387.1 1777647 R 235279 CDS NP_861388.1 32267356 1492404 complement(1778864..1779553) 1 NC_004917.1 ATP-binding component; ABC transporter 1779553 1492404 HH1857 Helicobacter hepaticus ATCC 51449 ABC transporter NP_861388.1 1778864 R 235279 CDS NP_861389.1 32267357 1492405 complement(1779571..1780866) 1 NC_004917.1 similar to Campylobacter jejuni CJ0606; predicted membrane-associated; hypothetical protein 1780866 1492405 HH1858 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861389.1 1779571 R 235279 CDS NP_861390.1 32267358 1492406 complement(1780863..1782374) 1 NC_004917.1 similar to Campylobacter jejuni CJ0364c; predicted outer membrane channel protein; hypothetical protein 1782374 1492406 HH1859 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861390.1 1780863 R 235279 CDS NP_861391.1 32267359 1492407 complement(1782375..1782473) 1 NC_004917.1 hypothetical protein 1782473 1492407 HH1860 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861391.1 1782375 R 235279 CDS NP_861392.1 32267360 1492408 1782509..1783933 1 NC_004917.1 similar to Helicobacter pylori JHP0016; hypothetical protein 1783933 1492408 HH1861 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861392.1 1782509 D 235279 CDS NP_861393.1 32267361 1492409 1783971..1784531 1 NC_004917.1 similar to Helicobacter pylori HP1457; hypothetical protein 1784531 1492409 HH1862 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861393.1 1783971 D 235279 CDS NP_861394.1 32267362 1492410 1784556..1785134 1 NC_004917.1 similar to Helicobacter pylori HP1456; predicted lipoprotein; hypothetical protein 1785134 1492410 HH1863 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861394.1 1784556 D 235279 CDS NP_861395.1 32267363 1492411 1785166..1786080 1 NC_004917.1 predicted secreted protein; hypothetical protein 1786080 1492411 HH1864 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861395.1 1785166 D 235279 CDS NP_861396.1 32267364 1492412 complement(1786083..1787474) 1 NC_004917.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 1787474 murE 1492412 murE Helicobacter hepaticus ATCC 51449 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase NP_861396.1 1786083 R 235279 CDS NP_861397.1 32267365 1492413 complement(1787446..1788087) 1 NC_004917.1 similar to Helicobacter pylori HP1493; hypothetical protein 1788087 1492413 HH1866 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861397.1 1787446 R 235279 CDS NP_861398.1 32267366 1492414 complement(1788093..1788368) 1 NC_004917.1 similar to Helicobacter pylori HP1492; predicted NifU-like protein; hypothetical protein 1788368 1492414 HH1867 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861398.1 1788093 R 235279 CDS NP_861399.1 32267367 1492415 1788566..1789567 1 NC_004917.1 C4-dicarboxylatebinding periplasmic protein 1789567 1492415 HH1868 Helicobacter hepaticus ATCC 51449 C4-dicarboxylatebinding periplasmic protein NP_861399.1 1788566 D 235279 CDS NP_861400.1 32267368 1492416 1789585..1790202 1 NC_004917.1 similar to Wolinella succinogenes small integral C4-dicarboxylate membrane transport protein; hypothetical protein 1790202 1492416 HH1869 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861400.1 1789585 D 235279 CDS NP_861401.1 32267369 1492417 1790213..1791487 1 NC_004917.1 similar to Wolinella succinogenes large integral C4-dicarboxylate membrane transport protein; hypothetical protein 1791487 1492417 HH1870 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861401.1 1790213 D 235279 CDS NP_861402.1 32267370 1492418 1791499..1793088 1 NC_004917.1 phosphate permease 1793088 1492418 HH1871 Helicobacter hepaticus ATCC 51449 phosphate permease NP_861402.1 1791499 D 235279 CDS NP_861403.1 32267371 1492419 1793147..1794469 1 NC_004917.1 similar to Helicobacter pylori HP1490; predicted membrane-associated; hypothetical protein 1794469 1492419 HH1872 Helicobacter hepaticus ATCC 51449 hypothetical protein NP_861403.1 1793147 D 235279 CDS NP_861404.1 32267372 1492420 complement(1794458..1795480) 1 NC_004917.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; uroporphyrinogen decarboxylase 1795480 hemE 1492420 hemE Helicobacter hepaticus ATCC 51449 uroporphyrinogen decarboxylase NP_861404.1 1794458 R 235279 CDS NP_861405.1 32267373 1492421 complement(1795495..1796520) 1 NC_004917.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; aspartate-semialdehyde dehydrogenase 1796520 asd 1492421 asd Helicobacter hepaticus ATCC 51449 aspartate-semialdehyde dehydrogenase NP_861405.1 1795495 R 235279 CDS NP_861406.1 32267374 1492422 complement(1796866..1799037) 1 NC_004917.1 carbon starvation protein A-like protein 1799037 cstA 1492422 cstA Helicobacter hepaticus ATCC 51449 carbon starvation protein A-like protein NP_861406.1 1796866 R 235279 CDS