-- dump date 20140619_104017 -- class Genbank::CDS -- table cds_note -- id note YP_005055392.1 TIGRFAM: Chromosomal replication control, initiator DnaA; PFAM: Chromosomal replication control, initiator (DnaA)/regulator (Hda); Chromosomal replication initiator, DnaA C-terminal; KEGG: aca:ACP_2123 chromosomal replication initiator protein DnaA; SMART: Chromosomal replication initiator, DnaA C-terminal; ATPase, AAA+ type, core YP_005055394.1 SMART: DNA polymerase III, beta chain; TIGRFAM: DNA polymerase III, beta chain; KEGG: aca:ACP_2196 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain, N-terminal; DNA polymerase III, beta chain, central; DNA polymerase III, beta chain, C-terminal YP_005055395.1 PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; ABC transporter-like; KEGG: cyb:CYB_0268 taurine ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005055396.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cya:CYA_1065 taurine ABC transporter permease protein YP_005055397.1 KEGG: sus:Acid_0160 hypothetical protein YP_005055398.1 TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; KEGG: bja:blr1365 beta-glucosidase; PFAM: Glycoside hydrolase, family 1 YP_005055399.1 PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_0663 TonB-dependent receptor YP_005055400.1 KEGG: sus:Acid_6084 hypothetical protein YP_005055401.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cyn:Cyan7425_4650 transcriptional regulator, LysR family YP_005055402.1 SMART: Cupin 1; TIGRFAM: Bicupin, oxalate decarboxylase/oxidase; Twin-arginine translocation pathway, signal sequence; KEGG: sno:Snov_1310 bicupin, oxalate decarboxylase family; PFAM: Cupin 1 YP_005055403.1 KEGG: aca:ACP_2654 zinc transporter ZitB; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_005055404.1 KEGG: sus:Acid_1826 peptidase S9 prolyl oligopeptidase YP_005055405.1 PFAM: Protein of unknown function DUF1003; KEGG: sus:Acid_4548 hypothetical protein YP_005055406.1 TIGRFAM: Peptide chain release factor 1; PFAM: Peptide chain release factor; Peptide chain release factor class I/class II; KEGG: aca:ACP_2651 peptide chain release factor 1; SMART: Peptide chain release factor YP_005055407.1 PFAM: Protein of unknown function DUF882; KEGG: aba:Acid345_0205 hypothetical protein YP_005055408.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: bmq:BMQ_3928 Rieske (2Fe-2S) domain protein YP_005055409.1 TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: aba:Acid345_3735 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA YP_005055410.1 KEGG: cse:Cseg_0583 PEGA domain-containing protein YP_005055411.1 KEGG: bbt:BBta_6724 hypothetical protein YP_005055412.1 KEGG: aca:ACP_2050 hypothetical protein YP_005055413.1 PFAM: Domain of unknown function DUF2846; KEGG: aca:ACP_0279 hypothetical protein YP_005055414.1 PFAM: Protein of unknown function DUF433; KEGG: hde:HDEF_1049 hypothetical protein YP_005055415.1 KEGG: xfa:XF2029 hypothetical protein YP_005055416.1 KEGG: sha:SH0891 hypothetical protein YP_005055417.1 PFAM: Restriction endonuclease, type II, HindIII; KEGG: bbr:BB0306 putative restriction endonuclease YP_005055418.1 PFAM: DNA methylase N-4/N-6; KEGG: hin:HI1392 modification methylase YP_005055419.1 SMART: DNA topoisomerase, type IIA, subunit A/C-terminal; TIGRFAM: DNA gyrase, subunit A; KEGG: aca:ACP_2084 DNA gyrase, A subunit; PFAM: DNA topoisomerase, type IIA, subunit A/C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel YP_005055420.1 PFAM: Aldose 1-epimerase; KEGG: sus:Acid_7259 aldose 1-epimerase YP_005055421.1 KEGG: sus:Acid_1082 maf protein; TIGRFAM: Maf-like protein; PFAM: Maf-like protein YP_005055422.1 PFAM: Glycosyl transferase, family 2; KEGG: msv:Mesil_1836 glycosyl transferase family 2 YP_005055423.1 KEGG: cag:Cagg_2602 excinuclease ABC C subunit domain protein; PFAM: Excinuclease ABC, C subunit, N-terminal; SMART: Excinuclease ABC, C subunit, N-terminal YP_005055424.1 KEGG: aca:ACP_2425 hypothetical protein YP_005055425.1 KEGG: mdi:METDI3481 hypothetical protein; PFAM: Endonuclease III-like, iron-sulphur cluster loop motif; SMART: HhH-GPD domain YP_005055426.1 KEGG: aca:ACP_1906 asparaginase family protein; PFAM: Peptidase T2, asparaginase 2 YP_005055427.1 PFAM: Protein of unknown function DUF946; KEGG: vvi:100259944 hypothetical protein LOC100259944 YP_005055428.1 PFAM: Peptidase M20, dimerisation; Peptidase M20; KEGG: aca:ACP_1903 peptidase, M20/M25/M40 family YP_005055429.1 KEGG: mpo:Mpop_2236 hypothetical protein YP_005055430.1 PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; manually curated; TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; KEGG: aca:ACP_1902 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase YP_005055431.1 PFAM: DinB; KEGG: cpi:Cpin_2467 hypothetical protein YP_005055432.1 TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; KEGG: aca:ACP_2315 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK YP_005055433.1 PFAM: Protein of unknown function DUF2136; KEGG: rrs:RoseRS_0380 hypothetical protein YP_005055434.1 KEGG: cyt:cce_3944 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005055435.1 PFAM: Amine oxidase; KEGG: aca:ACP_0806 hypothetical protein YP_005055436.1 TIGRFAM: Chaperonin ClpB; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; KEGG: aca:ACP_2407 ATP-dependent chaperone protein ClpB; SMART: ATPase, AAA+ type, core YP_005055437.1 PFAM: Protein of unknown function DUF1275; KEGG: mfa:Mfla_0180 hypothetical protein YP_005055438.1 KEGG: cbk:CLL_A1598 hypothetical protein YP_005055439.1 KEGG: sus:Acid_4530 hypothetical protein YP_005055440.1 PFAM: Peptidase M28; KEGG: aba:Acid345_1362 peptidase M28 YP_005055441.1 TIGRFAM: Gamma-glutamyltranspeptidase; KEGG: aba:Acid345_4599 gamma-glutamyltransferase 1; PFAM: Gamma-glutamyltranspeptidase YP_005055442.1 KEGG: aba:Acid345_2688 TPR repeat-containing protein YP_005055443.1 KEGG: aca:ACP_2170 acyltransferase family protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_005055444.1 TIGRFAM: Folylpolyglutamate synthetase; KEGG: aca:ACP_2169 tetrahydrofolate synthase; PFAM: Mur ligase, central; Mur ligase, C-terminal YP_005055445.1 KEGG: aca:ACP_1064 putative methyltransferase, TIGR00027 family; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, putative; PFAM: Leucine carboxyl methyltransferase YP_005055446.1 TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; KEGG: aca:ACP_2265 acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: Carboxyl transferase YP_005055447.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: aca:ACP_2203 AP endonuclease, family 2 YP_005055448.1 TIGRFAM: Asparaginyl-tRNA synthetase, class IIb; KEGG: aca:ACP_2204 asparaginyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type YP_005055449.1 KEGG: soz:Spy49_1425 hypothetical protein YP_005055450.1 KEGG: bur:Bcep18194_C7213 hypothetical protein YP_005055451.1 KEGG: aba:Acid345_2912 hypothetical protein YP_005055452.1 PFAM: TROVE; KEGG: aba:Acid345_2911 hypothetical protein YP_005055453.1 PFAM: Protein of unknown function DUF2191; KEGG: maq:Maqu_2253 hypothetical protein YP_005055454.1 PFAM: PilT protein, N-terminal; KEGG: aba:Acid345_0990 PilT protein-like YP_005055455.1 KEGG: sbi:SORBI_04g023070 hypothetical protein YP_005055456.1 KEGG: gvi:gll3227 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055457.1 KEGG: sus:Acid_2176 hypothetical protein YP_005055458.1 KEGG: sus:Acid_4376 luciferase family protein; TIGRFAM: Conserved hypothetical protein CHP03858, luciferase-like monooxygenase, putative; PFAM: Luciferase-like, subgroup YP_005055459.1 KEGG: aca:ACP_3077 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005055460.1 KEGG: aca:ACP_2077 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: Conserved hypothetical protein CHP00092; PFAM: Domain of unknown function DUF933; GTP-binding protein, HSR1-related YP_005055461.1 TIGRFAM: D-alanine--D-alanine ligase; KEGG: aca:ACP_2209 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal YP_005055462.1 KEGG: ngr:NAEGRDRAFT_74742 hypothetical protein YP_005055463.1 KEGG: aca:ACP_1401 threonine ammonia-lyase; TIGRFAM: Threonine dehydratase II; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005055464.1 TIGRFAM: Conserved hypothetical protein CHP03118; KEGG: aba:Acid345_1897 hypothetical protein YP_005055465.1 KEGG: sus:Acid_0670 hypothetical protein YP_005055466.1 KEGG: csc:Csac_0361 galacturan 1,4-alpha-galacturonidase; PFAM: Glycoside hydrolase, family 28; SMART: Parallel beta-helix repeat YP_005055467.1 PFAM: Acetyl xylan esterase; KEGG: sus:Acid_7102 putative xylan esterase YP_005055468.1 PFAM: Penicillinase repressor; KEGG: aca:ACP_2859 MarR family transcriptional regulatory protein YP_005055469.1 KEGG: aca:ACP_2858 peptidase, M56 family/TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: Peptidase M56, BlaR1; TonB, C-terminal YP_005055470.1 KEGG: aca:ACP_2333 FAD-binding/oxidase/4Fe-4S binding domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal YP_005055471.1 KEGG: bmc:BAbS19_I02320 ATP/GTP-binding site motif A (P-loop); PFAM: Fumarylacetoacetase, C-terminal-like YP_005055472.1 KEGG: aca:ACP_2353 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, YjcE-like, bacteria; PFAM: Cation/H+ exchanger YP_005055473.1 KEGG: rca:Rcas_2945 cobalamin synthesis protein P47K; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YP_005055474.1 KEGG: pen:PSEEN5427 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28 YP_005055475.1 KEGG: afr:AFE_2669 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33 YP_005055476.1 KEGG: rrs:RoseRS_0845 hypothetical protein YP_005055477.1 PFAM: Ferric-uptake regulator; KEGG: mrb:Mrub_1469 ferric uptake regulator, Fur family YP_005055478.1 PFAM: Glutamine cyclotransferase; KEGG: aca:ACP_0738 glutaminyl-peptide cyclotransferase family protein YP_005055479.1 KEGG: min:Minf_1978 prolipoprotein diacylglyceryltransferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase YP_005055480.1 KEGG: avi:Avi_3801 phospholipase C protein; PFAM: Phosphoesterase YP_005055481.1 KEGG: tjr:TherJR_0948 bilirubin oxidase; PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1 YP_005055482.1 PFAM: ATPase, BadF/BadG/BcrA/BcrD type; KEGG: aca:ACP_1344 transcription regulators of NagC/XylR family, sugar kinase, putative YP_005055483.1 KEGG: sus:Acid_3341 hypothetical protein YP_005055484.1 KEGG: dmo:Dmoj_GI17380 GI17380 gene product from transcript GI17380-RA YP_005055485.1 KEGG: dse:Dsec_GM21002 GM21002 gene product from transcript GM21002-RA YP_005055486.1 KEGG: bcx:BCA_0661 hypothetical protein YP_005055487.1 KEGG: plm:Plim_1216 hypothetical protein YP_005055488.1 PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: bpd:BURPS668_A1151 IclR family transcriptional regulator YP_005055489.1 KEGG: sus:Acid_4210 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29 YP_005055490.1 KEGG: hdn:Hden_2260 hypothetical protein YP_005055492.1 KEGG: dma:DMR_45340 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005055493.1 KEGG: bac:BamMC406_1337 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055494.1 KEGG: msl:Msil_0385 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055495.1 TIGRFAM: Chorismate mutase, periplasmic; PFAM: Chorismate mutase, type II; KEGG: pfl:PFL_0385 chorismate mutase; SMART: Chorismate mutase YP_005055496.1 PFAM: Glycosyl transferase, family 39; KEGG: aca:ACP_2072 tetratricopeptide repeat protein YP_005055497.1 manually curated; KEGG: dal:Dalk_0875 beta-lactamase YP_005055498.1 PFAM: Beta-lactamase-related; Peptidase S12, Pab87-related, C-terminal; KEGG: cse:Cseg_0713 beta-lactamase YP_005055499.1 PFAM: DAHP synthetase I/KDSA; manually curated; KEGG: aca:ACP_1272 phospho-2-dehydro-3-deoxyheptonate aldolase; TIGRFAM: DHAP synthase, class 1 YP_005055500.1 PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: mei:Msip34_2649 pyridoxamine 5'-phosphate oxidase-related FMN-binding YP_005055501.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cyj:Cyan7822_0278 TetR family transcriptional regulator YP_005055502.1 PFAM: Chloramphenicol acetyltransferase; KEGG: fjo:Fjoh_0863 chloramphenicol acetyltransferase YP_005055503.1 KEGG: gdj:Gdia_2326 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055504.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: sno:Snov_4166 transcriptional regulator, TetR family YP_005055505.1 PFAM: Aminoglycoside phosphotransferase; KEGG: nda:Ndas_2262 aminoglycoside phosphotransferase YP_005055506.1 KEGG: bxe:Bxe_B2092 hypothetical protein YP_005055508.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: mmb:Mmol_1914 TonB-dependent siderophore receptor YP_005055509.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mlo:mll7054 transcriptional regulator YP_005055510.1 KEGG: bcm:Bcenmc03_2390 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055511.1 KEGG: ara:Arad_7657 transcriptional regulator protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055512.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cak:Caul_3998 NAD-dependent epimerase/dehydratase YP_005055513.1 KEGG: sus:Acid_7069 redoxin domain-containing protein; manually curated; PFAM: Redoxin YP_005055514.1 KEGG: sus:Acid_7071 PadR family transcriptional regulator; manually curated; PFAM: Transcription regulator PadR N-terminal-like YP_005055515.1 KEGG: sus:Acid_7070 hypothetical protein YP_005055516.1 KEGG: aba:Acid345_1451 3-demethylubiquinone-9 3-methyltransferase YP_005055517.1 KEGG: bmr:BMI_I1915 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/classII; SMART: HTH transcriptional regulator, GntR YP_005055518.1 TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: cli:Clim_2176 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005055519.1 KEGG: rfr:Rfer_0315 phenylacetic acid degradation-related protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_005055520.1 KEGG: mbt:JTY_3098 putative hydroxylaminobenzene mutase YP_005055521.1 PFAM: Protein of unknown function DUF1200; KEGG: cel:ZK643.3 hypothetical protein YP_005055522.1 KEGG: gme:Gmet_2971 radical SAM family protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB YP_005055523.1 KEGG: aca:ACP_3453 DedA family protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_005055524.1 KEGG: rpf:Rpic12D_4406 transcriptional regulator, AsnC family; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator AsnC-type YP_005055525.1 PFAM: Drug/metabolite transporter; KEGG: aca:ACP_2219 membrane protein YP_005055526.1 KEGG: nmg:Nmag_3913 peptidase S8 and S53 subtilisin kexin sedolisin YP_005055527.1 PFAM: YCII-related; KEGG: mlo:mlr2587 hypothetical protein YP_005055528.1 KEGG: scl:sce6417 ECF subfamily RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_005055529.1 PFAM: YCII-related; KEGG: aba:Acid345_3072 DGPFAETKE domain-containing protein YP_005055530.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; Protein of unknown function DUF1351; KEGG: aba:Acid345_1725 OmpA/MotB family outer membrane protein YP_005055531.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cyn:Cyan7425_4650 transcriptional regulator, LysR family YP_005055532.1 KEGG: bxe:Bxe_B2664 putative short-chain type dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055533.1 KEGG: aca:ACP_2511 putative trehalase; PFAM: Glycoside hydrolase, family 37 YP_005055534.1 PFAM: Glycoside hydrolase, family 5; KEGG: aca:ACP_0988 glycosyl hydrolase, family 5 YP_005055535.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_2009 TonB-dependent receptor YP_005055536.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: min:Minf_0628 inosine-uridine nucleoside N-ribohydrolase YP_005055537.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: gdj:Gdia_0631 inosine/uridine-preferring nucleoside hydrolase YP_005055538.1 PFAM: MgsA AAA+ ATPase C-terminal; KEGG: cdl:CDR20291_0789 hypothetical protein YP_005055539.1 KEGG: pzu:PHZ_c3511 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055540.1 PFAM: Peptidase M28; KEGG: aba:Acid345_2040 peptidase M28 YP_005055541.1 manually curated; KEGG: mpo:Mpop_3639 hypothetical protein YP_005055542.1 KEGG: mea:Mex_1p3673 hypothetical protein YP_005055543.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: bcv:Bcav_2574 binding-protein-dependent transport systems inner membrane component YP_005055544.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: cwo:Cwoe_2761 binding-protein-dependent transport systems inner membrane component YP_005055545.1 PFAM: ABC transporter-like; KEGG: art:Arth_0028 ABC transporter-like protein; SMART: ATPase, AAA+ type, core YP_005055546.1 KEGG: oan:Oant_2979 NMT1/THI5-like domain-containing protein YP_005055547.1 KEGG: scl:sce2182 naringenin-chalcone synthase; PFAM: Chalcone/stilbene synthase, C-terminal; Chalcone/stilbene synthase, N-terminal YP_005055548.1 PFAM: Methyltransferase type 12; KEGG: scl:sce2183 3-demethylubiquinone-9 3-O-methyltransferase YP_005055549.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: scl:sce2184 putative electron transfer oxidoreductase YP_005055550.1 PFAM: Protein of unknown function DUF1801; KEGG: gau:GAU_1233 hypothetical protein YP_005055551.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aca:ACP_2007 efflux ABC transporter, macrolide exporter (MacB) family, permease protein YP_005055552.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aba:Acid345_0722 ABC efflux pump, inner membrane subunit YP_005055553.1 TIGRFAM: Glycosyl transferase, family 2, hopene-associated, HpnI; KEGG: aca:ACP_2005 glycosyl tranferase, homolog YP_005055554.1 KEGG: sus:Acid_5476 cyclic nucleotide-binding protein; PFAM: Protein of unknown function DUF1003; Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain YP_005055555.1 PFAM: Glycosyl transferase, family 39; KEGG: aba:Acid345_0725 glycosyl transferase family protein YP_005055556.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: aca:ACP_1879 Rieske 2Fe-2S domain protein YP_005055557.1 KEGG: gbm:Gbem_2066 laccase family multicopper oxidase YP_005055558.1 KEGG: cwo:Cwoe_3562 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005055559.1 PFAM: Protein of unknown function DUF3536; Glycoside hydrolase, family 57, N-terminal; KEGG: aca:ACP_1878 hypothetical protein YP_005055560.1 KEGG: mpo:Mpop_3165 hypothetical protein YP_005055561.1 KEGG: aca:ACP_1877 putative DNA-3-methyladenine glycosylase; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1 YP_005055562.1 KEGG: aae:aq_871 tRNA modification GTPase TrmE YP_005055563.1 KEGG: aba:Acid345_3004 chaperone protein HtpG YP_005055564.1 KEGG: aba:Acid345_3003 Fe-S-cluster-containing hydrogenase YP_005055565.1 PFAM: Polysulphide reductase, NrfD; KEGG: aba:Acid345_3002 polysulphide reductase, NrfD YP_005055566.1 PFAM: Protein of unknown function DUF3341; KEGG: aba:Acid345_3001 transmembrane prediction YP_005055567.1 PFAM: Cytochrome c, class I; KEGG: aba:Acid345_3000 hypothetical protein YP_005055568.1 KEGG: sus:Acid_0494 hypothetical protein YP_005055569.1 KEGG: aba:Acid345_2998 hypothetical protein YP_005055570.1 KEGG: sus:Acid_0496 electron transport protein SCO1/SenC YP_005055571.1 KEGG: aba:Acid345_2996 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome c, class I YP_005055572.1 KEGG: aba:Acid345_2995 cytochrome-c oxidase; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I YP_005055573.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: aba:Acid345_2994 cytochrome c oxidase, subunit III YP_005055574.1 TIGRFAM: Caa(3)-type oxidase, subunit IV; KEGG: aba:Acid345_2993 Caa(3)-type oxidase, subunit IV YP_005055575.1 PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: gym:GYMC10_1010 membrane bound O-acyl transferase MBOAT family protein YP_005055577.1 KEGG: mau:Micau_2468 beta-ketoacyl synthase YP_005055578.1 PFAM: tRNA/rRNA methyltransferase, SpoU; KEGG: aba:Acid345_2117 RNA methyltransferase TrmH, group 1 YP_005055579.1 KEGG: aba:Acid345_0178 hypothetical protein YP_005055580.1 TIGRFAM: DNA primase, DnaG; PFAM: DNA primase, catalytic core, N-terminal; Zinc finger, CHC2-type; DNA primase, DnaB-helicase binding domain; Toprim domain; KEGG: aca:ACP_1818 DNA primase; SMART: Toprim domain YP_005055581.1 TIGRFAM: Peptidase M22, O-sialoglycoprotein peptidase; Peptidase M22, glycoprotease, subgroup; KEGG: aca:ACP_2221 putative DNA-binding/iron metalloprotein/AP endonuclease; PFAM: Peptidase M22, glycoprotease YP_005055582.1 KEGG: aca:ACP_2222 tRNA nucleotidyltransferase/poly(A) polymerase family protein; TIGRFAM: Uncharacterised protein family HDIG; PFAM: Poly A polymerase, head domain; Metal-dependent phosphohydrolase, HD subdomain YP_005055583.1 KEGG: rca:Rcas_2471 hypothetical protein YP_005055584.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: sml:Smlt4066 putative deaminase YP_005055585.1 PFAM: Protein of unknown function DUF985; KEGG: aba:Acid345_1992 hypothetical protein YP_005055586.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: sus:Acid_2556 xanthine/uracil/vitamin C permease YP_005055587.1 TIGRFAM: Peroxiredoxin, osmotically inducible protein C, subgroup; KEGG: aca:ACP_2516 putative organic hydroperoxide resistance protein; PFAM: Peroxiredoxin, OsmC-like protein YP_005055588.1 PFAM: Yip1 domain; KEGG: aba:Acid345_4732 hypothetical protein YP_005055589.1 PFAM: Amine oxidase; KEGG: sus:Acid_7729 amine oxidase YP_005055590.1 KEGG: dze:Dd1591_1434 pectate lyase; TIGRFAM: Pectic acid lyase; PFAM: Pectic acid lyase YP_005055592.1 KEGG: aca:ACP_2852 rare lipoprotein A family protein; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase; Sporulation-related domain YP_005055593.1 KEGG: aba:Acid345_0790 hypothetical protein YP_005055594.1 KEGG: sus:Acid_5879 hypothetical protein YP_005055595.1 KEGG: aca:ACP_2419 outer membrane protein, OMP85 family; TIGRFAM: Outer membrane assembly protein, YaeT; PFAM: Bacterial surface antigen (D15); Surface antigen variable number YP_005055596.1 PFAM: Exosortase EpsH-related; KEGG: ote:Oter_3270 hypothetical protein YP_005055597.1 KEGG: lch:Lcho_0042 lipocalin family protein YP_005055598.1 KEGG: aca:ACP_2312 ribosome recycling factor; TIGRFAM: Ribosome recycling factor; PFAM: Ribosome recycling factor YP_005055599.1 TIGRFAM: Dihydropteroate synthase; KEGG: aca:ACP_2249 dihydropteroate synthase; PFAM: Pterin-binding YP_005055600.1 TIGRFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C; KEGG: aca:ACP_2250 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase; PFAM: Peptidase S13, D-Ala-D-Ala carboxypeptidase C YP_005055601.1 KEGG: aca:ACP_2514 hypothetical protein YP_005055602.1 PFAM: Uncharacterised conserved protein UCP007050, HI0931; KEGG: esa:ESA_01271 hypothetical protein YP_005055603.1 KEGG: aca:ACP_2082 hypothetical protein YP_005055604.1 PFAM: YkuD domain; Peptidoglycan binding-like; KEGG: aba:Acid345_0206 peptidoglycan binding domain-containing protein YP_005055605.1 KEGG: oan:Oant_1180 helix-turn-helix type 11 domain-containing protein YP_005055606.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azl:AZL_004080 hypothetical protein YP_005055607.1 PFAM: PilT protein, N-terminal; KEGG: gox:GOX2554 plasmid stability-like protein YP_005055608.1 KEGG: bxe:Bxe_C0680 prevent-host-death protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein YP_005055609.1 TIGRFAM: DNA helicase, DnaB type; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; KEGG: aca:ACP_1389 replicative DNA helicase; SMART: ATPase, AAA+ type, core YP_005055610.1 KEGG: aca:ACP_2391 aminotransferase, class V; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_005055611.1 PFAM: Methyltransferase type 11; KEGG: plm:Plim_3523 methyltransferase type 11 YP_005055612.1 KEGG: aca:ACP_2390 GatB/YqeY domain protein YP_005055613.1 KEGG: aba:Acid345_3907 hypothetical protein YP_005055614.1 KEGG: sus:Acid_0962 hypothetical protein YP_005055615.1 KEGG: sus:Acid_0962 hypothetical protein YP_005055616.1 KEGG: aca:ACP_1932 amidase domain protein; PFAM: Amidase YP_005055617.1 PFAM: YCII-related; KEGG: aba:Acid345_2205 hypothetical protein YP_005055618.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rpa:RPA3696 TetR family transcriptional regulator YP_005055619.1 KEGG: afr:AFE_2012 hypothetical protein YP_005055620.1 PFAM: PilT protein, N-terminal; KEGG: fra:Francci3_1681 PilT protein-like YP_005055621.1 KEGG: cno:NT01CX_0053 MiaB-like tRNA modifying enzyme YP_005055622.1 KEGG: rec:RHECIAT_PC0000124 probable transcriptional regulator protein, AraC family; PFAM: HTH transcriptional regulator, AraC, arabinose-binding/dimerisation; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055623.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_0014 outer membrane efflux protein YP_005055624.1 PFAM: Protein AaeX; KEGG: aca:ACP_0013 hypothetical protein YP_005055625.1 PFAM: Secretion protein HlyD; KEGG: aca:ACP_0012 multidrug resistance protein MdtN YP_005055626.1 PFAM: Fusaric acid resistance protein, conserved region; KEGG: aca:ACP_0011 fusaric acid resistance domain protein YP_005055627.1 KEGG: sco:SCO7108 hypothetical protein YP_005055628.1 PFAM: Cupin 2, conserved barrel; KEGG: sus:Acid_5271 cupin 2 domain-containing protein YP_005055629.1 KEGG: kfl:Kfla_3877 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70, ECF type; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005055630.1 PFAM: Radical SAM; KEGG: aba:Acid345_0176 radical SAM family Fe-S protein YP_005055631.1 TIGRFAM: Para-aminobenzoate synthase, component I; KEGG: cts:Ctha_2549 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding, C-terminal; Aminotransferase, class IV YP_005055633.1 PFAM: Cytochrome b/b6, N-terminal; KEGG: sus:Acid_1448 thiosulfate reductase cytochrome b subunit (membrane anchoring protein)-like protein YP_005055634.1 PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: sli:Slin_4244 oxidoreductase molybdopterin binding protein YP_005055635.1 PFAM: Methyltransferase type 11; KEGG: cyc:PCC7424_5332 methyltransferase type 11 YP_005055636.1 PFAM: Protein of unknown function DUF2064; KEGG: mno:Mnod_3287 hypothetical protein YP_005055637.1 KEGG: mno:Mnod_3288 hypothetical protein YP_005055638.1 PFAM: Glycosyl transferase, family 2; KEGG: mno:Mnod_3290 glycosyl transferase family 2 YP_005055639.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: aba:Acid345_3265 NAD-dependent epimerase/dehydratase YP_005055640.1 KEGG: mpr:MPER_10133 hypothetical protein YP_005055641.1 TIGRFAM: DNA gyrase, subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, domain 2; ATPase-like, ATP-binding domain; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; KEGG: aca:ACP_2742 DNA gyrase, B subunit; SMART: DNA topoisomerase, type IIA, subunit B/N-terminal; ATPase-like, ATP-binding domain YP_005055642.1 KEGG: aba:Acid345_0126 MIP family channel protein; TIGRFAM: Aquaporin; PFAM: Major intrinsic protein YP_005055643.1 PFAM: Prevent-host-death protein; KEGG: ttj:TTHA0488 antitoxin of toxin-antitoxin stability system YP_005055644.1 PFAM: PilT protein, N-terminal; KEGG: alv:Alvin_3227 PilT protein domain protein YP_005055645.1 KEGG: aba:Acid345_1491 PgPepO oligopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal YP_005055646.1 PFAM: Acyltransferase 3; KEGG: cpi:Cpin_4745 acyltransferase 3 YP_005055647.1 KEGG: aca:ACP_2247 ribosomal protein L35; TIGRFAM: Ribosomal protein L35, non-mitochondrial; PFAM: Ribosomal protein L35 YP_005055648.1 KEGG: aca:ACP_2248 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; PFAM: Ribosomal protein L20 YP_005055649.1 PFAM: PilT protein, N-terminal; KEGG: mar:MAE_54730 PilT protein-like protein YP_005055650.1 PFAM: FAD linked oxidase, N-terminal; KEGG: sti:Sthe_2273 FAD linked oxidase domain protein YP_005055651.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: tra:Trad_2707 short-chain dehydrogenase/reductase SDR YP_005055652.1 PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_4190 TonB-dependent receptor YP_005055653.1 KEGG: bps:BPSS1434 membrane-anchored cell surface protein YP_005055654.1 KEGG: sus:Acid_0860 hypothetical protein YP_005055655.1 KEGG: aba:Acid345_4190 TonB-dependent receptor YP_005055656.1 PFAM: TonB-dependent receptor, beta-barrel; KEGG: aca:ACP_1982 TonB-dependent receptor YP_005055657.1 KEGG: aca:ACP_1579 histidine acid phosphatase family protein; PFAM: Histidine phosphatase superfamily, clade-2 YP_005055658.1 KEGG: dre:100006405 hypothetical LOC100006405 YP_005055659.1 KEGG: aba:Acid345_4448 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2 YP_005055660.1 PFAM: Lipase, GDSL; KEGG: npu:Npun_R5301 GDSL family lipase YP_005055661.1 PFAM: Helix-turn-helix, HxlR type; KEGG: ara:Arad_9310 transcriptional regulator protein YP_005055662.1 KEGG: ypb:YPTS_1286 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_005055663.1 KEGG: mbn:Mboo_1172 TPR repeat-containing protein YP_005055664.1 KEGG: cce:Ccel_0103 hypothetical protein YP_005055665.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sus:Acid_4132 GCN5-related N-acetyltransferase YP_005055666.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bcj:BCAS0688 TetR family regulatory protein YP_005055667.1 KEGG: pfs:PFLU4646 3-ketoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055668.1 KEGG: bxe:Bxe_B0549 putative short-chain type dehydrogenase/reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055669.1 PFAM: Protein of unknown function DUF427; KEGG: bxe:Bxe_A1300 hypothetical protein YP_005055670.1 PFAM: Protein of unknown function DUF1486; KEGG: cak:Caul_5094 hypothetical protein YP_005055671.1 KEGG: afw:Anae109_2150 NmrA family protein YP_005055672.1 KEGG: bgf:BC1003_4306 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055673.1 KEGG: gau:GAU_0289 putative oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055674.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bgf:BC1003_3820 short-chain dehydrogenase/reductase SDR YP_005055676.1 KEGG: gsu:GSU0801 hypothetical protein YP_005055677.1 KEGG: bur:Bcep18194_A4365 hypothetical protein YP_005055678.1 KEGG: pmr:PMI3662 hypothetical protein YP_005055679.1 KEGG: cyn:Cyan7425_4983 hypothetical protein YP_005055680.1 PFAM: RecF/RecN/SMC; KEGG: scl:sce1430 hypothetical protein YP_005055681.1 KEGG: sjp:SJA_C1-31980 hypothetical protein YP_005055682.1 KEGG: sjp:SJA_C1-31970 putative radical SAM; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005055683.1 SMART: Prolyl 4-hydroxylase, alpha subunit; KEGG: sjp:SJA_C1-31990 hypothetical protein YP_005055684.1 KEGG: sjp:SJA_C1-32000 hypothetical protein YP_005055685.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: aca:ACP_3196 ParB family protein; SMART: ParB-like nuclease YP_005055686.1 KEGG: aca:ACP_3195 hypothetical protein YP_005055687.1 KEGG: aca:ACP_1222 hypothetical protein YP_005055688.1 KEGG: aca:ACP_3225 hypothetical protein YP_005055689.1 KEGG: aca:ACP_3165 hypothetical protein YP_005055690.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aca:ACP_3164 transcriptional regulator, LysR family YP_005055692.1 KEGG: bgl:bglu_1g28500 tetratricopeptide TPR_2 YP_005055693.1 PFAM: Protein of unknown function DUF1016; KEGG: app:CAP2UW1_3124 protein of unknown function DUF1016 YP_005055694.1 PFAM: Integrase, catalytic core, phage; KEGG: aca:ACP_1233 phage integrase family protein YP_005055696.1 KEGG: aca:ACP_1989 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_005055697.1 KEGG: aba:Acid345_3851 putative anti-sigma factor YP_005055698.1 KEGG: aca:ACP_1992 hypothetical protein YP_005055699.1 SMART: Ribonuclease III; Double-stranded RNA-binding; TIGRFAM: Ribonuclease III, bacterial; KEGG: aca:ACP_2037 ribonuclease III; PFAM: Ribonuclease III; Double-stranded RNA-binding YP_005055700.1 TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: aca:ACP_2038 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_005055701.1 TIGRFAM: Peptidase S26A, signal peptidase I; KEGG: aca:ACP_2039 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_005055702.1 KEGG: aca:ACP_2039 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; Peptidase S26, conserved region YP_005055703.1 PFAM: AsmA; KEGG: aca:ACP_2040 hypothetical protein YP_005055704.1 KEGG: aca:ACP_2290 RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005055705.1 KEGG: aca:ACP_2291 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005055706.1 PFAM: Acriflavin resistance protein; KEGG: aca:ACP_2292 RND transporter, hydrophobe/amphiphile efflux-1 (HAE1) family, permease protein YP_005055707.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bge:BC1002_4174 transcriptional regulator, TetR family YP_005055708.1 KEGG: aba:Acid345_0507 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005055709.1 PFAM: Signal transduction histidine kinase, osmosensitive K+ channel sensor, N-terminal; UspA; KEGG: aba:Acid345_0508 osmosensitive K+ channel, histidine kinase sensor YP_005055710.1 KEGG: ava:Ava_B0199 hypothetical protein YP_005055711.1 PFAM: Glycosyl transferase, group 1; KEGG: geo:Geob_1923 glycosyl transferase group 1 YP_005055712.1 PFAM: Protein of unknown function DUF1597; KEGG: xal:XALc_2834 hypothetical protein YP_005055713.1 KEGG: aca:ACP_0428 hypothetical protein YP_005055714.1 TIGRFAM: ATPase, K+ transporting, A subunit; KEGG: aca:ACP_0429 potassium-transporting ATPase subunit A; PFAM: ATPase, K+ transporting, A subunit YP_005055715.1 TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: aba:Acid345_0511 potassium-translocating P-type ATPase, B subunit; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase YP_005055716.1 TIGRFAM: Potassium transporting ATPase, C subunit; KEGG: aba:Acid345_0512 potassium-transporting ATPase, C subunit; PFAM: Potassium transporting ATPase, C subunit YP_005055717.1 KEGG: dre:492787 cell adhesion molecule 4 YP_005055718.1 KEGG: dwi:Dwil_GK17419 GK17419 gene product from transcript GK17419-RA YP_005055719.1 PFAM: Tetratricopeptide TPR-1; KEGG: tpr:Tpau_3922 hypothetical protein YP_005055720.1 KEGG: hoh:Hoch_2332 von Willebrand factor type A; PFAM: von Willebrand factor, type A; Vault protein inter-alpha-trypsin; SMART: von Willebrand factor, type A YP_005055721.1 KEGG: dal:Dalk_2117 two component regulator propeller domain protein YP_005055722.1 TIGRFAM: 2-methylcitrate dehydratase PrpD; KEGG: bpt:Bpet1812 2-methylcitrate dehydratase; PFAM: MmgE/PrpD YP_005055723.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: bcj:BCAM2702 methylcitrate synthase; PFAM: Citrate synthase-like YP_005055724.1 TIGRFAM: Methylisocitrate lyase; KEGG: mmb:Mmol_0750 2-methylisocitrate lyase; PFAM: Isocitrate lyase/phosphorylmutase YP_005055725.1 PFAM: Metallo-dependent phosphatase; KEGG: aca:ACP_2727 hypothetical protein YP_005055726.1 KEGG: ddi:DDB_G0272516 hypothetical protein YP_005055727.1 KEGG: aca:ACP_1954 2,3-diketo-L-gulonate reductase; PFAM: Malate/L-lactate dehydrogenase YP_005055728.1 PFAM: Transport-associated; KEGG: aca:ACP_0576 hypothetical protein YP_005055729.1 KEGG: aca:ACP_1840 hypothetical protein YP_005055730.1 KEGG: ote:Oter_2177 hypothetical protein YP_005055731.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: aca:ACP_1776 3-oxoacyl-(acyl-carrier-protein) synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_005055732.1 KEGG: aca:ACP_1777 acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); PFAM: Phosphopantetheine-binding YP_005055733.1 PFAM: DNA recombination RmuC; KEGG: ajs:Ajs_2489 hypothetical protein YP_005055734.1 KEGG: gca:Galf_1420 hypothetical protein YP_005055735.1 PFAM: Plasmid stabilisation system; KEGG: gca:Galf_1421 plasmid stabilization system YP_005055736.1 KEGG: aca:ACP_3001 hypothetical protein YP_005055737.1 KEGG: aca:ACP_2383 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005055738.1 KEGG: aca:ACP_2551 FeS assembly protein IscX; TIGRFAM: ISC system FeS cluster assembly, IscX; PFAM: ISC system FeS cluster assembly, IscX YP_005055739.1 PFAM: Flagellin assembly, membrane protein MviN; KEGG: aca:ACP_2073 putative membrane protein MviN YP_005055740.1 SMART: HTH transcriptional regulator, MerR; KEGG: aca:ACP_2017 transcription regulator protein YP_005055741.1 KEGG: nfa:nfa21710 hypothetical protein YP_005055742.1 PFAM: FAD dependent oxidoreductase; KEGG: afw:Anae109_0239 FAD dependent oxidoreductase YP_005055743.1 PFAM: Protein of unknown function DUF1275; KEGG: reu:Reut_B5698 hypothetical protein YP_005055744.1 TIGRFAM: Tyrosyl-tRNA synthetase, class Ib; KEGG: aca:ACP_2327 tyrosine--tRNA ligase; PFAM: Aminoacyl-tRNA synthetase, class Ib YP_005055745.1 KEGG: bpy:Bphyt_1700 aldehyde reductase; PFAM: NADP-dependent oxidoreductase domain YP_005055746.1 KEGG: aca:ACP_1797 hypothetical protein YP_005055747.1 KEGG: deb:DehaBAV1_0058 hypothetical protein YP_005055748.1 KEGG: aca:ACP_3100 hypothetical protein YP_005055749.1 KEGG: aca:ACP_1792 oxidoreductase, short chain dehydrogenase/reductase family; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055750.1 KEGG: aca:ACP_1790 hypothetical protein YP_005055751.1 KEGG: aca:ACP_2637 beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ YP_005055752.1 TIGRFAM: Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; KEGG: aca:ACP_2638 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosamine O-acyltransferase; PFAM: Bacterial transferase hexapeptide repeat YP_005055753.1 PFAM: Protein of unknown function DUF891; KEGG: xfn:XfasM23_1023 hypothetical protein YP_005055754.1 KEGG: xfn:XfasM23_1024 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005055755.1 PFAM: Protein of unknown function DUF1009; KEGG: aca:ACP_2639 hypothetical protein YP_005055756.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sus:Acid_3599 redoxin domain-containing protein YP_005055757.1 KEGG: aca:ACP_2641 hypothetical protein YP_005055759.1 KEGG: aca:ACP_2642 transglycosylase, SLT family; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_005055760.1 KEGG: aca:ACP_2643 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_005055761.1 KEGG: aba:Acid345_0602 glycosylasparaginase; PFAM: Peptidase T2, asparaginase 2 YP_005055762.1 KEGG: aba:Acid345_0247 outer membrane chaperone Skp (OmpH); PFAM: Outer membrane chaperone Skp (OmpH); SMART: Outer membrane chaperone Skp (OmpH) YP_005055763.1 KEGG: aba:Acid345_0785 hypothetical protein YP_005055764.1 KEGG: afv:AFLA_063410 hypothetical protein YP_005055765.1 KEGG: bbt:BBta_6724 hypothetical protein YP_005055766.1 KEGG: psl:Psta_0275 uncharacterized peroxidase-related enzyme; TIGRFAM: Alkylhydroperoxidase AhpD core; Uncharacterised peroxidase-related; PFAM: Carboxymuconolactone decarboxylase YP_005055767.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cyt:cce_5272 TetR family transcriptional regulator YP_005055768.1 KEGG: llo:LLO_1401 hypothetical protein, SPFH domain/band 7 family; PFAM: Band 7 protein; SMART: Band 7 protein YP_005055769.1 TIGRFAM: Glucose-inhibited division protein A; HAMAP: Glucose-inhibited division protein A; KEGG: aca:ACP_2349 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; PFAM: Glucose-inhibited division protein A-related YP_005055770.1 PFAM: Protein of unknown function DUF480; KEGG: aba:Acid345_3645 hypothetical protein YP_005055771.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: aba:Acid345_4406 peptidase M16-like YP_005055772.1 TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; KEGG: aca:ACP_1923 malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_005055773.1 KEGG: aca:ACP_2289 hypothetical protein YP_005055774.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: sus:Acid_4915 glycerophosphoryl diester phosphodiesterase YP_005055775.1 KEGG: sus:Acid_6949 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005055776.1 PFAM: Acriflavin resistance protein; KEGG: sus:Acid_6950 acriflavin resistance protein YP_005055777.1 KEGG: sus:Acid_6951 acriflavin resistance protein; manually curated; PFAM: Acriflavin resistance protein YP_005055778.1 KEGG: sus:Acid_6952 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005055779.1 PFAM: UbiA prenyltransferase; KEGG: aav:Aave_0064 hypothetical protein YP_005055780.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain 1, bacterial; KEGG: aca:ACP_1828 phenylalanyl-tRNA synthetase, alpha subunit; PFAM: Phenylalanyl-tRNA synthetase YP_005055781.1 KEGG: aca:ACP_1829 hypothetical protein; manually curated; PFAM: 23S rRNA-associated protein YP_005055782.1 TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; KEGG: aca:ACP_1830 phenylalanyl-tRNA synthetase, beta subunit YP_005055783.1 KEGG: aba:Acid345_0719 hypothetical protein YP_005055784.1 PFAM: Cell division protein ZapA-like; KEGG: aca:ACP_1832 hypothetical protein YP_005055785.1 KEGG: ses:SARI_00897 hypothetical protein YP_005055786.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: rrs:RoseRS_0325 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_005055787.1 PFAM: Prolipoprotein diacylglyceryl transferase; KEGG: aca:ACP_1834 putative prolipoprotein diacylglyceryl transferase YP_005055788.1 TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: aca:ACP_1835 pseudouridine synthase, RluA family; SMART: RNA-binding S4 YP_005055789.1 TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aca:ACP_1808 hypothetical protein; SMART: von Willebrand factor, type A YP_005055790.1 KEGG: ddi:DDB_G0285349 anaphase promoting complex subunit 1 YP_005055791.1 KEGG: aca:ACP_1937 conserved hypothetical protein TIGR00730; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG YP_005055792.1 PFAM: Ribonuclease T2; KEGG: bbt:BBta_1732 putative ribonuclease T2 family protein YP_005055793.1 KEGG: amc:MADE_01948 P-aminobenzoate synthetase, component I YP_005055794.1 PFAM: DNA helicase, UvrD/REP type; KEGG: aca:ACP_1793 ATP-dependent DNA helicase, UvrD/REP family YP_005055795.1 KEGG: aca:ACP_1794 hypothetical protein YP_005055796.1 PFAM: Amino acid permease domain; KEGG: aca:ACP_1795 amino acid transpoprter, cationic amino acid transporter (CAT) family YP_005055797.1 PFAM: Protein of unknown function DUF2071; KEGG: chu:CHU_0378 hypothetical protein YP_005055798.1 PFAM: Inhibitor of apoptosis-promoting Bax1-related; KEGG: nis:NIS_1837 hypothetical protein YP_005055799.1 TIGRFAM: Adenosine deaminase; KEGG: aca:ACP_2020 adenosine deaminase; PFAM: Adenosine/AMP deaminase YP_005055800.1 PFAM: Protein of unknown function DUF1470; Zinc finger, CGNR; KEGG: pfs:PFLU2974 hypothetical protein YP_005055801.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bcj:BCAL1139 putative hydrolase YP_005055802.1 PFAM: Protein of unknown function DUF81; KEGG: aca:ACP_1934 hypothetical protein YP_005055803.1 PFAM: Gamma-butyrobetaine dioxygenase/Trimethyllysine dioxygenase, N-terminal; KEGG: aca:ACP_1936 hypothetical protein YP_005055804.1 PFAM: ABC transporter-like; KEGG: aca:ACP_1933 oligopeptide ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005055805.1 KEGG: gvi:glr3014 hypothetical protein YP_005055806.1 KEGG: pfl:PFL_1405 oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005055807.1 KEGG: aca:ACP_2687 heat shock protein 15; PFAM: RNA-binding S4; SMART: RNA-binding S4 YP_005055808.1 KEGG: sus:Acid_3638 Cna B domain-containing protein YP_005055810.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Lipoate synthase; KEGG: aba:Acid345_4487 lipoyl synthase; PFAM: Radical SAM YP_005055811.1 KEGG: rrs:RoseRS_2624 cyclic nucleotide-binding protein YP_005055812.1 KEGG: aca:ACP_2251 putative cytochrome c family protein YP_005055813.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: aba:Acid345_0157 PpiC-type peptidyl-prolyl cis-trans isomerase YP_005055814.1 KEGG: ppp:PHYPADRAFT_77008 hypothetical protein YP_005055815.1 TIGRFAM: D-3-phosphoglycerate dehydrogenase; KEGG: aca:ACP_2392 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; Amino acid-binding ACT YP_005055816.1 KEGG: ote:Oter_2177 hypothetical protein YP_005055817.1 KEGG: ote:Oter_2177 hypothetical protein YP_005055818.1 PFAM: Glutathionylspermidine synthase; KEGG: sus:Acid_7141 glutathionylspermidine synthase YP_005055819.1 KEGG: cai:Caci_8738 hypothetical protein YP_005055820.1 TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; KEGG: aca:ACP_2079 UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase YP_005055821.1 PFAM: Protein of unknown function DUF885; KEGG: sus:Acid_4336 hypothetical protein YP_005055822.1 PFAM: Condensation domain; KEGG: msl:Msil_3898 condensation domain protein YP_005055823.1 TIGRFAM: Transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Transcription-repair-coupling factor domain; KEGG: aca:ACP_2078 transcription-repair coupling factor; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal YP_005055824.1 TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Asn/Gln amidotransferase; KEGG: aca:ACP_2849 aspartyl/glutamyl-tRNA amidotransferase subunit B; SMART: Asn/Gln amidotransferase YP_005055825.1 KEGG: syg:sync_1872 arginine repressor domain-containing protein YP_005055826.1 KEGG: aba:Acid345_0032 hypothetical protein YP_005055827.1 PFAM: Protein of unknown function DUF541; KEGG: npu:Npun_R1843 hypothetical protein YP_005055828.1 KEGG: aca:ACP_1773 hypothetical protein YP_005055829.1 PFAM: Cytochrome C, Planctomycete; KEGG: psl:Psta_2730 protein of unknown function DUF1549 YP_005055830.1 PFAM: RDD; KEGG: aca:ACP_2127 RDD domain protein YP_005055831.1 PFAM: Organic solvent tolerance protein, C-terminal; KEGG: aba:Acid345_0160 organic solvent tolerance protein OstA-like YP_005055832.1 KEGG: aca:ACP_2130 putative lipoprotein YP_005055833.1 KEGG: aba:Acid345_3658 hypothetical protein YP_005055834.1 KEGG: aca:ACP_0488 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005055835.1 TIGRFAM: Molybdenum cofactor biosynthesis protein A; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; KEGG: aca:ACP_2936 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_005055836.1 KEGG: aca:ACP_2021 hypothetical protein YP_005055837.1 TIGRFAM: Regulatory protein, FmdB, putative; PFAM: Regulatory protein, FmdB, putative; KEGG: aba:Acid345_0034 type I antifreeze protein; SMART: Regulatory protein, FmdB, putative YP_005055838.1 KEGG: tfu:Tfu_0880 regulatory protein, MarR; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005055839.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: aca:ACP_2705 TonB-dependent receptor YP_005055840.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA helicase, Holliday junction RuvB type; KEGG: aca:ACP_2080 Holliday junction DNA helicase RuvB; HAMAP: DNA helicase, Holliday junction RuvB type; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal YP_005055841.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005055842.1 KEGG: aca:ACP_1386 glucokinase regulator (GCKR) family protein; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; PFAM: Sugar isomerase (SIS) YP_005055843.1 PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: aca:ACP_3065 transporter, major facilitator family YP_005055844.1 KEGG: aca:ACP_3066 hypothetical protein YP_005055845.1 PFAM: Carboxylesterase, type B; KEGG: pzu:PHZ_c2449 para-nitrobenzyl esterase YP_005055846.1 PFAM: Putative esterase; KEGG: aba:Acid345_1859 putative esterase YP_005055847.1 KEGG: aca:ACP_3068 phosphoenolpyruvate carboxykinase (GTP); PFAM: Phosphoenolpyruvate carboxylase YP_005055848.1 PFAM: Protein of unknown function DUF3052; KEGG: gau:GAU_0037 hypothetical protein YP_005055849.1 PFAM: Acyltransferase 3; KEGG: rme:Rmet_2746 acyltransferase 3 YP_005055850.1 TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: rpc:RPC_0016 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal YP_005055851.1 KEGG: aca:ACP_3071 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_005055852.1 KEGG: aca:ACP_3080 hypothetical protein YP_005055853.1 KEGG: aba:Acid345_4379 hypothetical protein YP_005055854.1 KEGG: aba:Acid345_4407 hypothetical protein; TIGRFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG; PFAM: Cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG YP_005055855.1 KEGG: aca:ACP_2848 hypothetical protein YP_005055856.1 PFAM: Glycosyl transferase, group 1; KEGG: aca:ACP_2588 glycosyl transferase, group 1 family YP_005055857.1 KEGG: ara:Arad_3387 transcriptional regulator protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055858.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: hch:HCH_04393 hypothetical protein YP_005055859.1 PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: mpo:Mpop_1988 alpha amylase catalytic region YP_005055860.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_1637 outer membrane efflux protein family YP_005055861.1 KEGG: aca:ACP_2833 hypothetical protein YP_005055862.1 PFAM: Ribonuclease H domain; KEGG: aca:ACP_2389 ribonuclease HI YP_005055863.1 KEGG: amt:Amet_2120 glutathione transferase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_005055864.1 KEGG: aca:ACP_2386 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005055865.1 KEGG: aca:ACP_2385 hypothetical protein YP_005055866.1 KEGG: aca:ACP_2384 nonpeptidase homolog, S1C (protease Do) family; PFAM: PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_005055867.1 PFAM: Ferredoxin; KEGG: aca:ACP_2550 ferredoxin, 2Fe-2S type, ISC system YP_005055868.1 KEGG: aca:ACP_2549 Fe-S protein assembly chaperone HscA; TIGRFAM: ISC system FeS cluster assembly, HscA chaperone; PFAM: Heat shock protein 70 YP_005055869.1 PFAM: Alcohol dehydrogenase, C-terminal; KEGG: bcj:BCAM1375 putative zinc-binding dehydrogenase YP_005055870.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smt:Smal_1233 glyoxalase/bleomycin resistance protein/dioxygenase YP_005055871.1 KEGG: aba:Acid345_3880 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005055872.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: aca:ACP_2548 tautomerase family protein YP_005055873.1 TIGRFAM: Co-chaperone Hsc20; PFAM: Heat shock protein DnaJ, N-terminal; KEGG: aba:Acid345_0481 heat shock protein DnaJ-like; SMART: Heat shock protein DnaJ, N-terminal YP_005055874.1 KEGG: xoo:XOO1338 hypothetical protein YP_005055875.1 PFAM: Integrase, catalytic core; KEGG: bxe:Bxe_A0541 putative transposase integrase YP_005055876.1 KEGG: fjo:Fjoh_3045 natural resistance-associated macrophage protein YP_005055877.1 KEGG: aca:ACP_2546 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis YP_005055878.1 KEGG: aca:ACP_2545 scaffold protein; TIGRFAM: ISC system FeS cluster assembly, IscU scaffold; PFAM: NIF system FeS cluster assembly, NifU, N-terminal YP_005055879.1 KEGG: aba:Acid345_0100 hypothetical protein YP_005055880.1 PFAM: Ankyrin repeat; KEGG: aas:Aasi_1435 hypothetical protein YP_005055881.1 KEGG: llo:LLO_2640 virulence factor MviN homolog YP_005055882.1 TIGRFAM: Cysteine desulfurase; KEGG: aca:ACP_2544 cysteine desulfurase IscS; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_005055883.1 KEGG: aca:ACP_2543 Rrf2 family protein; TIGRFAM: Transcription regulator Rrf2; PFAM: Transcription regulator Rrf2 YP_005055884.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aca:ACP_2541 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_005055885.1 KEGG: aba:Acid345_0165 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; PFAM: Ribosomal protein L28 YP_005055886.1 TIGRFAM: Methionine sulphoxide reductase B; KEGG: aca:ACP_1806 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B YP_005055887.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_1776 TonB-dependent receptor YP_005055888.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: aba:Acid345_2179 hypothetical protein YP_005055889.1 KEGG: aca:ACP_1807 putative endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; PFAM: Endoribonuclease L-PSP YP_005055890.1 PFAM: Protein of unknown function DUF937; KEGG: mms:mma_0219 hypothetical protein YP_005055891.1 KEGG: aba:Acid345_4632 hypothetical protein YP_005055892.1 TIGRFAM: Folate-dependent ribothymidyl synthase; KEGG: aca:ACP_1852 tRNA (uracil-5-)-methyltransferase Gid; PFAM: Glucose-inhibited division protein A-related YP_005055893.1 KEGG: pmy:Pmen_1241 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain YP_005055894.1 KEGG: aba:Acid345_4717 hypothetical protein YP_005055895.1 PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; Glycosyl transferase, group 1; KEGG: aca:ACP_1608 3-deoxy-D-manno-octulosonic-acid transferase YP_005055896.1 TIGRFAM: Tetraacyldisaccharide 4'-kinase; KEGG: aca:ACP_1607 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase YP_005055897.1 KEGG: aca:ACP_1606 lipopolysaccharide heptosyltransferase I; TIGRFAM: Lipopolysaccharide heptosyltransferase I; PFAM: Glycosyl transferase, family 9 YP_005055898.1 KEGG: aca:ACP_1605 hypothetical protein YP_005055899.1 KEGG: aca:ACP_1604 hypothetical protein YP_005055900.1 PFAM: Protein of unknown function DUF2007; KEGG: aca:ACP_2460 hypothetical protein YP_005055901.1 KEGG: aca:ACP_1848 ExsB protein; TIGRFAM: Queuosine synthesis; PFAM: Queuosine synthesis YP_005055902.1 PFAM: Tetratricopeptide TPR-1; Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_1847 hypothetical protein YP_005055903.1 TIGRFAM: Molybdenum cofactor synthesis; PFAM: MoeA, N-terminal and linker domain; Molybdopterin binding; MoeA, C-terminal, domain IV; KEGG: aba:Acid345_4646 molybdopterin molybdochelatase; SMART: Molybdopterin binding YP_005055904.1 KEGG: aca:ACP_1845 molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdenum cofactor biosynthesis C; PFAM: Molybdopterin cofactor biosynthesis C (MoaC) domain YP_005055905.1 KEGG: aca:ACP_1953 hypothetical protein; TIGRFAM: Methyltransferase-like; PFAM: Protein of unknown function DUF2260 YP_005055906.1 KEGG: aca:ACP_1952 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP03440; PFAM: Sulphatase-modifying factor YP_005055907.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: ppp:PHYPADRAFT_129414 hypothetical protein YP_005055908.1 KEGG: epy:EpC_10600 plasmid maintenance system antidote protein, probable fragment YP_005055909.1 PFAM: Helix-turn-helix, HxlR type; KEGG: bsb:Bresu_1566 transcriptional regulator, HxlR family YP_005055910.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: aca:ACP_2417 oxidoreductase, short-chain dehydrogenase/reductase family YP_005055911.1 KEGG: aca:ACP_2590 segregation and condensation protein B; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote YP_005055912.1 KEGG: pcs:Pc12g08920 Pc12g08920 YP_005055913.1 TIGRFAM: Pseudouridine synthase, RsuA/RluB/E/F; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; KEGG: aca:ACP_2589 pseudouridine synthase RsuA family protein; SMART: RNA-binding S4 YP_005055914.1 KEGG: aca:ACP_2263 hypothetical protein YP_005055915.1 KEGG: aca:ACP_2263 hypothetical protein YP_005055916.1 KEGG: dfe:Dfer_0760 hypothetical protein YP_005055917.1 KEGG: dma:DMR_38240 hypothetical protein YP_005055918.1 PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: pla:Plav_1959 membrane bound O-acyl transferase MBOAT family protein YP_005055919.1 PFAM: Protein of unknown function DUF417; KEGG: mpo:Mpop_5456 hypothetical protein YP_005055920.1 KEGG: mei:Msip34_2644 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005055921.1 KEGG: cai:Caci_8646 NHL repeat containing protein YP_005055922.1 KEGG: aca:ACP_0935 response regulator DrrA; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005055923.1 KEGG: aca:ACP_0934 sensory transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS YP_005055924.1 KEGG: tjr:TherJR_0948 bilirubin oxidase; PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3 YP_005055925.1 PFAM: Phosphoesterase; KEGG: avi:Avi_3801 phospholipase C protein YP_005055926.1 KEGG: aca:ACP_3399 hypothetical protein YP_005055927.1 KEGG: aba:Acid345_2975 ABC transporter, periplasmic phosphate binding protein; TIGRFAM: Periplasmic phosphate binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_005055928.1 KEGG: aba:Acid345_2974 phosphate ABC transporter inner membrane protein; TIGRFAM: Phosphate ABC transporter, permease protein PstC; PFAM: Binding-protein-dependent transport systems inner membrane component YP_005055929.1 KEGG: aba:Acid345_2973 ABC phosphate transporter, inner membrane subunit; TIGRFAM: Phosphate transport system permease protein 2; PFAM: Binding-protein-dependent transport systems inner membrane component YP_005055930.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Phosphate transport system permease protein 1; KEGG: aca:ACP_0933 phosphate ABC transporter, ATP-binding protein; PFAM: ABC transporter-like YP_005055931.1 KEGG: aca:ACP_0932 phosphate transport system regulatory protein PhoU; TIGRFAM: PhoU; PFAM: PhoU YP_005055932.1 PFAM: Dihydroorotate dehydrogenase, class 1/ 2; KEGG: bln:Blon_2323 dihydroorotate dehydrogenase YP_005055933.1 KEGG: rmr:Rmar_2181 orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyl transferase, clade 1; PFAM: Phosphoribosyltransferase YP_005055934.1 SMART: Orotidine 5'-phosphate decarboxylase domain; TIGRFAM: Orotidine 5'-phosphate decarboxylase, type 2; KEGG: cpc:Cpar_0074 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase domain YP_005055935.1 KEGG: lbf:LBF_0299 cyclic amidohydrolase; PFAM: Amidohydrolase 1 YP_005055936.1 TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; KEGG: zma:100282373 LOC100282373; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain YP_005055937.1 PFAM: Ferritin/Dps protein; KEGG: etr:ETAE_2762 DNA-binding ferritin-like protein (oxidative damage protectant) YP_005055938.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: aba:Acid345_4012 hypothetical protein YP_005055939.1 PFAM: Sodium/solute symporter; KEGG: bte:BTH_I0960 sodium:solute symporter family protein YP_005055940.1 KEGG: aca:ACP_2331 hypothetical protein YP_005055941.1 KEGG: aca:ACP_0304 hypothetical protein YP_005055942.1 KEGG: aca:ACP_2330 3-hydroxybutyryl-CoA dehydratase; PFAM: Crotonase, core YP_005055943.1 KEGG: aca:ACP_2328 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase YP_005055944.1 KEGG: aca:ACP_2329 transcription antitermination factor NusB; TIGRFAM: NusB antitermination factor; PFAM: NusB/RsmB/TIM44 YP_005055945.1 KEGG: aca:ACP_1459 putative lipoprotein YP_005055946.1 KEGG: aca:ACP_1458 peptidase, S9C (acylaminoacyl-peptidase) family YP_005055947.1 PFAM: FR47-like; KEGG: aca:ACP_2830 acetyltransferase, GNAT family YP_005055948.1 KEGG: aca:ACP_1456 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacteria; PFAM: Ribosomal protein S12/S23 YP_005055949.1 KEGG: aca:ACP_1455 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; PFAM: Ribosomal protein S7 YP_005055950.1 SMART: Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; manually curated; KEGG: aca:ACP_1454 elongation factor G; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal YP_005055951.1 KEGG: aca:ACP_2919 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2 YP_005055952.1 KEGG: aca:ACP_1452 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10 subgroup; PFAM: Ribosomal protein S10 YP_005055953.1 KEGG: aca:ACP_1451 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; PFAM: Ribosomal protein L3 YP_005055954.1 PFAM: Ribosomal protein L4/L1e; KEGG: aca:ACP_1450 50S ribosomal protein L4 YP_005055955.1 PFAM: Ribosomal protein L25/L23; KEGG: aca:ACP_1449 50S ribosomal protein L23 YP_005055956.1 KEGG: aca:ACP_1448 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; PFAM: Ribosomal protein L2, C-terminal; Ribosomal Proteins L2, RNA binding domain YP_005055957.1 KEGG: aca:ACP_1447 ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; PFAM: Ribosomal protein S19/S15 YP_005055958.1 KEGG: aca:ACP_1446 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; PFAM: Ribosomal protein L22/L17 YP_005055959.1 TIGRFAM: Ribosomal protein S3, bacterial; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; KEGG: aca:ACP_1445 ribosomal protein S3; SMART: K Homology YP_005055960.1 KEGG: aca:ACP_1444 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_005055961.1 KEGG: aca:ACP_1443 ribosomal protein L29; TIGRFAM: Ribosomal protein L29; PFAM: Ribosomal protein L29 YP_005055962.1 KEGG: aca:ACP_1442 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; PFAM: Ribosomal protein S17 YP_005055963.1 KEGG: aca:ACP_1441 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; PFAM: Ribosomal protein L14b/L23e YP_005055964.1 TIGRFAM: Ribosomal protein L24; PFAM: KOW; KEGG: aca:ACP_1440 50S ribosomal protein L24; SMART: KOW YP_005055965.1 PFAM: Ribosomal protein L5; KEGG: aca:ACP_1439 ribosomal protein L5 YP_005055966.1 PFAM: Ribosomal protein S14; KEGG: aca:ACP_1438 ribosomal protein S14 YP_005055967.1 PFAM: Ribosomal protein S8; KEGG: aca:ACP_1437 30S ribosomal protein S8 YP_005055968.1 KEGG: aca:ACP_1436 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; PFAM: Ribosomal protein L6, alpha-beta domain YP_005055969.1 KEGG: aca:ACP_1435 ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; PFAM: Ribosomal protein L18/L5 YP_005055970.1 KEGG: aca:ACP_1434 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; PFAM: Ribosomal protein S5, C-terminal; Ribosomal protein S5, N-terminal YP_005055971.1 KEGG: aca:ACP_1433 50S ribosomal protein L30; TIGRFAM: Ribosomal protein L30, bacterial-type; PFAM: Ribosomal protein L30, ferredoxin-like fold domain YP_005055972.1 KEGG: aca:ACP_1432 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; PFAM: Ribosomal protein L18e/L15 YP_005055973.1 KEGG: aca:ACP_1431 preprotein translocase, SecY subunit; TIGRFAM: SecY protein; PFAM: SecY protein YP_005055974.1 KEGG: aca:ACP_1430 adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; PFAM: Adenylate kinase; Adenylate kinase, active site lid domain YP_005055975.1 TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; KEGG: aba:Acid345_1248 methionine aminopeptidase, type I; PFAM: Peptidase M24, structural domain YP_005055976.1 KEGG: ote:Oter_0718 phosphoenolpyruvate carboxykinase; PFAM: Phosphoenolpyruvate carboxykinase, GTP-utilising YP_005055977.1 KEGG: aca:ACP_2469 NADH dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region YP_005055978.1 KEGG: blt:Balat_1100 hypothetical protein YP_005055979.1 TIGRFAM: Branched-chain amino acid aminotransferase I; KEGG: aca:ACP_2474 branched-chain-amino-acid transaminase; PFAM: Aminotransferase, class IV YP_005055980.1 KEGG: rpa:RPA4065 hypothetical protein YP_005055981.1 KEGG: aca:ACP_2475 membrane protein, MarC family; TIGRFAM: Multiple antibiotic resistance (MarC)-related; PFAM: Multiple antibiotic resistance (MarC)-related YP_005055982.1 KEGG: aba:Acid345_2352 hypothetical protein YP_005055983.1 manually curated; KEGG: aca:ACP_1672 hypothetical protein YP_005055984.1 KEGG: tac:Ta0862 hypothetical protein YP_005055985.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: ara:Arad_10051 epoxide hydrolase protein YP_005055986.1 KEGG: bpy:Bphyt_1694 epoxide hydrolase domain protein; PFAM: Epoxide hydrolase, N-terminal YP_005055987.1 TIGRFAM: PAS; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold-4; Helix-turn-helix, Fis-type; PAS fold-3; KEGG: afw:Anae109_1061 sigma-54 dependent trancsriptional regulator; SMART: ATPase, AAA+ type, core; PAC motif; PAS YP_005055988.1 KEGG: fjo:Fjoh_4367 hypothetical protein YP_005055989.1 KEGG: sro:Sros_2978 hypothetical protein YP_005055990.1 KEGG: aca:ACP_1888 hypothetical protein YP_005055991.1 KEGG: aca:ACP_1890 hypothetical protein YP_005055992.1 KEGG: aba:Acid345_1028 putative transmembrane transcriptional regulator YP_005055993.1 KEGG: aca:ACP_1893 RNA polymerase sigma-70 factor, ECF family protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_005055994.1 PFAM: Superoxide dismutase, copper/zinc binding; KEGG: pjd:Pjdr2_0456 superoxide dismutase copper/zinc binding YP_005055995.1 KEGG: ssp:SSP0765 thymidine kinase; PFAM: Thymidine kinase YP_005055996.1 KEGG: aba:Acid345_3745 alpha/beta hydrolase; PFAM: Alpha/beta hydrolase fold-1 YP_005055997.1 KEGG: aca:ACP_3302 hypothetical protein YP_005055998.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_1060 hypothetical protein YP_005055999.1 PFAM: Uncharacterised protein family UPF0145; KEGG: sus:Acid_4599 hypothetical protein YP_005056000.1 TIGRFAM: Anthranilate phosphoribosyl transferase; KEGG: aca:ACP_2598 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal YP_005056001.1 TIGRFAM: Succinyl-CoA synthetase, beta subunit; KEGG: aca:ACP_2612 succinyl-CoA synthetase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase YP_005056002.1 SMART: CoA-binding; TIGRFAM: Succinyl-CoA ligase, alpha subunit; KEGG: aca:ACP_2614 succinyl-CoA synthetase alpha chain; PFAM: CoA-binding; ATP-citrate lyase/succinyl-CoA ligase YP_005056003.1 SMART: Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; KEGG: aca:ACP_2617 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase YP_005056004.1 PFAM: Lipase, GDSL; KEGG: aca:ACP_2448 GDSL-like lipase/acylhydrolase domain protein YP_005056005.1 KEGG: aba:Acid345_0321 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_005056006.1 TIGRFAM: Fumarylacetoacetase; KEGG: aca:ACP_0315 fumarylacetoacetase; PFAM: Fumarylacetoacetase, C-terminal-like; Fumarylacetoacetase, N-terminal YP_005056007.1 KEGG: vei:Veis_1393 extracellular solute-binding protein YP_005056008.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: aca:ACP_2817 oxidoreductase, aldo/keto reductase family YP_005056009.1 TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; KEGG: aca:ACP_3311 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_005056010.1 KEGG: ddc:Dd586_0028 hypothetical protein YP_005056011.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ara:Arad_3573 short-chain oxidoreductase protein YP_005056012.1 KEGG: pag:PLES_39431 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056013.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: smd:Smed_5282 LysR family transcriptional regulator YP_005056014.1 KEGG: aca:ACP_2749 hypothetical protein YP_005056015.1 KEGG: lbz:LbrM15_V2.0820 ABC1 transporter-like protein YP_005056016.1 KEGG: aca:ACP_2748 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_005056017.1 KEGG: gca:Galf_1277 hypothetical protein YP_005056018.1 PFAM: O-antigen ligase-related; KEGG: aba:Acid345_0891 O-antigen polymerase YP_005056019.1 KEGG: psp:PSPPH_1438 poly(beta-D-mannuronate) C5 epimerase 3 (mannuronanepimerase 3) YP_005056020.1 PFAM: Uncharacterised protein family UPF0118; KEGG: aca:ACP_0952 hypothetical protein YP_005056021.1 KEGG: aca:ACP_0950 shikimate kinase domain protein; PFAM: Shikimate kinase YP_005056022.1 KEGG: aba:Acid345_2487 hypothetical protein YP_005056023.1 KEGG: rcu:RCOM_1806160 RNA polymerase sigma-H factor, putative; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005056024.1 PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; KEGG: aca:ACP_0601 ThiF family/MoeZ/MoeB domain protein YP_005056025.1 PFAM: Bacterial surface antigen (D15); Surface antigen variable number; KEGG: aca:ACP_0602 outer membrane protein, OMP85 family YP_005056026.1 PFAM: SurA N-terminal; KEGG: aca:ACP_0603 hypothetical protein YP_005056027.1 PFAM: Protein of unknown function DUF490; KEGG: aca:ACP_0604 hypothetical protein YP_005056028.1 PFAM: Transport-associated; KEGG: aca:ACP_0605 phospholipid-binding protein YP_005056029.1 KEGG: aca:ACP_0606 putative 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase-related; PFAM: UbiA prenyltransferase YP_005056031.1 KEGG: pti:PHATRDRAFT_54588 hypothetical protein YP_005056032.1 KEGG: cai:Caci_8646 NHL repeat containing protein YP_005056033.1 PFAM: CsbD-like; KEGG: aca:ACP_1814 CsbD family protein YP_005056034.1 KEGG: gbm:Gbem_0454 hypothetical protein YP_005056035.1 KEGG: aca:ACP_0608 prephenate dehydratase; PFAM: Prephenate dehydratase; Amino acid-binding ACT YP_005056036.1 KEGG: aba:Acid345_0272 hypothetical protein YP_005056037.1 KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005056038.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; KEGG: wch:wcw_0356 6-phosphogluconate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, C-terminal; 6-phosphogluconate dehydrogenase, NAD-binding YP_005056039.1 KEGG: aba:Acid345_1582 hypothetical protein YP_005056040.1 KEGG: nda:Ndas_4894 NADH/ubiquinone/plastoquinone (complex I) YP_005056041.1 KEGG: aca:ACP_3104 iron-sulfur cluster assembly accessory protein; TIGRFAM: FeS cluster insertion; PFAM: FeS cluster biogenesis YP_005056042.1 PFAM: Type II secretion system F domain; KEGG: aca:ACP_3111 putative type 4 fimbrial assembly protein PilC YP_005056043.1 KEGG: aba:Acid345_2637 prevent-host-death protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein YP_005056044.1 KEGG: aba:Acid345_2636 PilT protein-like; manually curated; PFAM: PilT protein, N-terminal YP_005056045.1 KEGG: aca:ACP_3110 type 4 fimbrial assembly protein; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core YP_005056046.1 KEGG: aca:ACP_3109 hypothetical protein YP_005056047.1 PFAM: Fimbrial assembly; KEGG: aca:ACP_3108 fimbrial assembly protein, PilN family YP_005056048.1 KEGG: aca:ACP_3107 hypothetical protein YP_005056049.1 KEGG: aca:ACP_3106 hypothetical protein YP_005056050.1 KEGG: aca:ACP_3105 putative secretion/fimbrial assembly protein YP_005056051.1 KEGG: aba:Acid345_4210 hypothetical protein YP_005056052.1 KEGG: aca:ACP_0810 hypothetical protein YP_005056053.1 PFAM: Peptidase M24, structural domain; KEGG: aca:ACP_0809 peptidase, M24B family YP_005056054.1 PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: bpy:Bphyt_4778 peptidase S53 propeptide; SMART: Peptidase S53, propeptide YP_005056055.1 KEGG: sus:Acid_6245 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005056056.1 KEGG: aba:Acid345_4251 YD repeat-containing protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: YD repeat YP_005056057.1 KEGG: hau:Haur_1973 tail collar domain-containing protein YP_005056058.1 KEGG: pno:SNOG_15864 hypothetical protein YP_005056059.1 KEGG: sjp:SJA_C1-29600 hypothetical protein YP_005056060.1 KEGG: aca:ACP_3327 IF-2 family protein; TIGRFAM: Translation initiation factor aIF-2, bacterial-like; Small GTP-binding protein; PFAM: Translation initiation factor IF- 2, domain 3; Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2 YP_005056061.1 TIGRFAM: Transcription termination factor NusA; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA-binding domain; KEGG: aca:ACP_3326 transcription termination factor NusA; SMART: RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1; K Homology YP_005056062.1 PFAM: Ribosome maturation factor RimP; KEGG: aca:ACP_3325 hypothetical protein YP_005056063.1 PFAM: Nucleotidyl transferase domain; KEGG: rpc:RPC_4901 DNA polymerase, beta-like region YP_005056064.1 PFAM: HEPN; KEGG: gur:Gura_2469 HEPN domain-containing protein YP_005056065.1 PFAM: Protein of unknown function DUF503; KEGG: aca:ACP_1062 hypothetical protein YP_005056066.1 KEGG: aca:ACP_1065 ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; PFAM: Ribosome-binding factor A YP_005056067.1 PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; KEGG: aca:ACP_1066 DHH family/DHHA1 domain protein YP_005056068.1 KEGG: aca:ACP_1067 dolichyl-phosphate-mannose-protein mannosyltransferase family protein YP_005056069.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aca:ACP_1068 acetyltransferase, GNAT family YP_005056070.1 SMART: Cystathionine beta-synthase, core; TIGRFAM: IMP dehydrogenase; KEGG: aca:ACP_3315 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core YP_005056071.1 KEGG: aba:Acid345_2854 amidase; PFAM: Amidase YP_005056072.1 KEGG: sus:Acid_0911 surface antigen YP_005056073.1 PFAM: Surface antigen variable number; KEGG: sus:Acid_0911 surface antigen YP_005056074.1 KEGG: rha:RHA1_ro03196 hypothetical protein YP_005056075.1 KEGG: svo:SVI_0679 hypothetical protein YP_005056076.1 KEGG: bcj:BCAS0321a hypothetical protein YP_005056077.1 KEGG: mau:Micau_2453 hypothetical protein YP_005056078.1 PFAM: Circadian clock protein KaiC/DNA repair protein RadA; KEGG: aba:Acid345_0067 putative circadian clock protein, KaiC; SMART: ATPase, AAA+ type, core YP_005056079.1 KEGG: afw:Anae109_0952 peptidase S9 prolyl oligopeptidase YP_005056080.1 KEGG: aca:ACP_2824 tagatose 1,6-diphosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_005056081.1 TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; KEGG: aca:ACP_2825 tRNA nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2 YP_005056082.1 KEGG: aba:Acid345_4444 hypothetical protein YP_005056083.1 PFAM: Iron sulphur-containing domain, CDGSH-type; KEGG: aca:ACP_0124 hypothetical protein YP_005056084.1 KEGG: aba:Acid345_3526 hypothetical protein YP_005056085.1 KEGG: aba:Acid345_3525 Cna B-type protein YP_005056086.1 KEGG: bpf:BpOF4_06055 alpha-amylase/pullulanase (includes: alpha-amylase (1,4-alpha-D-glucan glucanohydrolase); pullulanase) YP_005056087.1 KEGG: zma:100285770 skin secretory protein xP2 YP_005056088.1 KEGG: sbi:SORBI_01g034560 hypothetical protein YP_005056089.1 KEGG: ppp:PHYPADRAFT_190982 hypothetical protein YP_005056090.1 KEGG: pti:PHATRDRAFT_49748 hypothetical protein YP_005056091.1 KEGG: hch:HCH_00197 hypothetical protein YP_005056092.1 KEGG: rpb:RPB_1215 hypothetical protein YP_005056093.1 KEGG: rcu:RCOM_1410580 hypothetical protein YP_005056094.1 TIGRFAM: Homogentisate 1,2-dioxygenase; KEGG: aba:Acid345_2005 homogentisate 1,2-dioxygenase; PFAM: Homogentisate 1,2-dioxygenase YP_005056095.1 KEGG: xcv:XCV3148 putative aminopeptidase precursor YP_005056096.1 TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: sus:Acid_0364 amidase; PFAM: Peptidase M20 YP_005056097.1 PFAM: Cupin 2, conserved barrel; KEGG: msv:Mesil_1786 cupin 2 conserved barrel domain protein YP_005056098.1 TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: dge:Dgeo_2610 allantoate amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation YP_005056099.1 TIGRFAM: Uricase; KEGG: scl:sce4023 putative uricase; PFAM: Uricase YP_005056100.1 KEGG: scl:sce5881 transthyretin-related protein; TIGRFAM: Hydroxyisourate hydrolase; PFAM: Transthyretin/hydroxyisourate hydrolase YP_005056101.1 KEGG: hch:HCH_01094 putative OHCU decarboxylase; TIGRFAM: 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase, type 2; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase YP_005056102.1 TIGRFAM: Allantoinase; KEGG: scl:sce5876 allantoinase; PFAM: Amidohydrolase 1 YP_005056103.1 KEGG: bld:BLi01418 GuaD; PFAM: CMP/dCMP deaminase, zinc-binding YP_005056104.1 PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; KEGG: aca:ACP_0317 homoserine dehydrogenase YP_005056105.1 KEGG: aca:ACP_2889 rhodanese/MoeB/ThiF domain protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; Rhodanese-like; SMART: Rhodanese-like YP_005056106.1 PFAM: ThiamineS; KEGG: aca:ACP_2890 ThiS domain protein YP_005056107.1 KEGG: aca:ACP_2891 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1 YP_005056108.1 KEGG: aca:ACP_2892 putative cysteine synthase B; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005056109.1 KEGG: aba:Acid345_0195 hypothetical protein YP_005056110.1 KEGG: glo:Glov_3116 transposase IS4 family protein YP_005056111.1 KEGG: mpo:Mpop_4949 putative transcriptional regulator YP_005056112.1 TIGRFAM: Uncharacterised protein family UPF0011; HAMAP: Ribosomal RNA small subunit methyltransferase I; KEGG: aca:ACP_2904 tetrapyrrole methylase family protein; PFAM: Tetrapyrrole methylase YP_005056113.1 PFAM: Cystathionine beta-synthase, core; KEGG: aca:ACP_2905 peptidase, M50 family YP_005056114.1 KEGG: aca:ACP_2906 putative methyltransferase; TIGRFAM: RNA methyltransferase, RsmD; PFAM: RNA methyltransferase, RsmD YP_005056115.1 KEGG: sus:Acid_2325 hypothetical protein YP_005056116.1 TIGRFAM: Thiamine-monophosphate kinase; KEGG: aca:ACP_2909 thiamine-phosphate kinase; PFAM: AIR synthase-related protein; AIR synthase-related protein, C-terminal YP_005056117.1 KEGG: glo:Glov_3116 transposase IS4 family protein YP_005056118.1 PFAM: Amidohydrolase 1; KEGG: scl:sce0056 hypothetical protein YP_005056119.1 PFAM: Peptidase M23; KEGG: aca:ACP_2910 peptidase M23B family, nonpeptidase homolog YP_005056120.1 KEGG: xca:xccb100_3160 TonB-dependent outer membrane receptor YP_005056121.1 PFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: aca:ACP_0087 circadian phase modifier CpmA homolog YP_005056122.1 TIGRFAM: Conserved hypothetical protein CHP00268; KEGG: aca:ACP_0085 conserved hypothetical protein TIGR00268 YP_005056123.1 PFAM: Protein of unknown function DUF2088; KEGG: psl:Psta_1048 hypothetical protein YP_005056124.1 KEGG: aba:Acid345_1399 hypothetical protein YP_005056125.1 KEGG: sus:Acid_4572 hypothetical protein YP_005056126.1 KEGG: aba:Acid345_1402 flotillin; PFAM: Band 7 protein; SMART: Band 7 protein YP_005056127.1 PFAM: PspA/IM30; KEGG: aba:Acid345_1403 phage shock protein A, PspA YP_005056128.1 KEGG: cha:CHAB381_0750 flavodoxin YP_005056129.1 KEGG: lmc:Lm4b_02368 cell wall surface anchor family protein (LPXTG motif) YP_005056130.1 KEGG: gdj:Gdia_2326 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056131.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: azl:AZL_c03050 transcriptional regulator YP_005056132.1 KEGG: sus:Acid_2195 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain YP_005056133.1 KEGG: gau:GAU_2136 two-component histidine kinase; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005056134.1 KEGG: ter:Tery_3497 peptidase-like; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat YP_005056135.1 KEGG: cci:CC1G_10128 hypothetical protein YP_005056136.1 KEGG: sus:Acid_1999 hypothetical protein YP_005056137.1 PFAM: Protein of unknown function DUF3037; KEGG: ank:AnaeK_1723 hypothetical protein YP_005056138.1 KEGG: cai:Caci_8646 NHL repeat containing protein YP_005056139.1 KEGG: sus:Acid_2907 NHL repeat-containing protein YP_005056140.1 KEGG: aba:Acid345_4686 hypothetical protein YP_005056141.1 KEGG: aca:ACP_2915 hypothetical protein YP_005056142.1 KEGG: aca:ACP_2918 hypothetical protein YP_005056143.1 KEGG: aca:ACP_2919 elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2 YP_005056144.1 KEGG: aca:ACP_2920 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; PFAM: Ribosomal protein L33 YP_005056145.1 KEGG: aba:Acid345_4682 SecE subunit of protein translocation complex; TIGRFAM: SecE subunit of protein translocation complex; PFAM: Protein SecE/Sec61-gamma protein YP_005056146.1 TIGRFAM: Transcription antitermination protein, NusG; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; KEGG: aca:ACP_2923 transcription termination/antitermination factor NusG; SMART: Transcription antitermination protein, NusG, N-terminal; KOW YP_005056147.1 TIGRFAM: Ribosomal protein L11, bacterial-type; PFAM: Ribosomal protein L11, C-terminal domain; Ribosomal protein L11, N-terminal domain; KEGG: aba:Acid345_4680 50S ribosomal protein L11; SMART: Ribosomal protein L11 YP_005056148.1 KEGG: aba:Acid345_4601 TPR repeat-containing protein YP_005056149.1 PFAM: Sulfatase; KEGG: npu:Npun_F2392 sulfatase YP_005056150.1 KEGG: mau:Micau_6051 helix-turn-helix domain-containing protein YP_005056151.1 SMART: PDZ/DHR/GLGF; KEGG: gdj:Gdia_2079 hypothetical protein YP_005056152.1 KEGG: ter:Tery_1515 hypothetical protein YP_005056153.1 PFAM: Sugar transport; KEGG: sli:Slin_2647 putative integral membrane protein; putative sugar permease YP_005056154.1 TIGRFAM: Ribokinase, bacterial; KEGG: avi:Avi_7361 ribokinase; PFAM: Carbohydrate/purine kinase YP_005056155.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: gdi:GDI_2727 hypothetical protein YP_005056156.1 PFAM: HTH transcriptional regulator, LysR; LysR, substrate-binding; KEGG: ppf:Pput_3105 LysR family transcriptional regulator YP_005056157.1 KEGG: aca:ACP_3153 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005056158.1 TIGRFAM: Phospholipase C, phosphocholine-specific; Twin-arginine translocation pathway, signal sequence; KEGG: bid:Bind_1837 phospholipase C, phosphocholine-specific; PFAM: Phosphoesterase; Phospholipase C, bacterial, C-terminal YP_005056159.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: aba:Acid345_4312 sugar phosphate isomerases/epimerases YP_005056160.1 PFAM: Protein of unknown function DUF2062; KEGG: pif:PITG_10747 hypothetical protein YP_005056161.1 PFAM: Glycosyl hydrolase, family 88; KEGG: cpi:Cpin_5505 glycosyl hydrolase family 88 YP_005056162.1 KEGG: aca:ACP_3392 putative 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_005056163.1 KEGG: cim:CIMG_00926 hypothetical protein YP_005056164.1 KEGG: aca:ACP_2925 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; PFAM: Ribosomal protein L1 YP_005056165.1 PFAM: Ribosomal protein L10/acidic P0; KEGG: aca:ACP_2926 50S ribosomal protein L10 YP_005056166.1 KEGG: aca:ACP_2927 ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal YP_005056167.1 KEGG: aca:ACP_2928 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 2; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 7; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain YP_005056168.1 TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 5; RNA polymerase Rpb1, domain 3; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 4; KEGG: aca:ACP_2929 DNA-directed RNA polymerase, beta subunit; SMART: RNA polymerase, N-terminal YP_005056169.1 KEGG: har:HEAR0007 hypothetical protein YP_005056170.1 KEGG: ses:SARI_03884 hypothetical protein; PFAM: Reverse transcriptase YP_005056171.1 KEGG: amc:MADE_00630 prevent-host-death protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein YP_005056172.1 PFAM: PilT protein, N-terminal; KEGG: gvi:glr1771 hypothetical protein YP_005056173.1 PFAM: Transposase IS200-like; KEGG: aca:ACP_0645 hypothetical protein YP_005056174.1 manually curated; KEGG: scl:sce5302 3-oxoacyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056175.1 PFAM: S1/P1 nuclease; KEGG: azc:AZC_0874 endonuclease YP_005056176.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mex:Mext_4060 glyoxalase/bleomycin resistance protein/dioxygenase YP_005056177.1 KEGG: aca:ACP_1736 exodeoxyribonuclease VII, large subunit; TIGRFAM: Exonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type YP_005056178.1 PFAM: Ion transport 2; KEGG: aca:ACP_1734 hypothetical protein YP_005056179.1 KEGG: aba:Acid345_4139 hypothetical protein YP_005056180.1 KEGG: aca:ACP_2324 gas vesicle protein, GvpL/GvpF family; manually curated; PFAM: Gas vesicle protein GvpL/GvpF YP_005056181.1 KEGG: aca:ACP_2887 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_005056182.1 PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation domain; KEGG: aca:ACP_2883 glutamate dehydrogenase; SMART: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal YP_005056183.1 KEGG: dae:Dtox_4245 phage tail tape measure protein, TP901 family YP_005056184.1 KEGG: msl:Msil_0367 hypothetical protein YP_005056185.1 KEGG: pal:PAa_0446 hypothetical protein YP_005056186.1 KEGG: rec:RHECIAT_CH0003894 putative cobalamin synthesis protein, P47K family YP_005056187.1 TIGRFAM: Anthranilate synthase component I, PabB-like; KEGG: aca:ACP_2882 anthranilate synthase component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal YP_005056188.1 KEGG: acr:Acry_1522 hypothetical protein YP_005056189.1 KEGG: ecb:100055493 similar to TTX-resistant sodium channel YP_005056190.1 TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: aca:ACP_2879 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal YP_005056191.1 KEGG: aca:ACP_2878 hypothetical protein YP_005056192.1 TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: aca:ACP_2876 translation elongation factor P; SMART: Elongation factor P, C-terminal YP_005056193.1 PFAM: Acylphosphatase-like; KEGG: aca:ACP_2872 acylphosphatase YP_005056194.1 KEGG: aca:ACP_2871 adenine phosphoribosyltransferase; TIGRFAM: Adenine phosphoribosyl transferase; PFAM: Phosphoribosyltransferase YP_005056195.1 KEGG: aca:ACP_1385 TonB family C-terminal domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005056196.1 KEGG: aca:ACP_1764 oxidoreductase, zinc-binding dehydrogenase family; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal YP_005056197.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: aca:ACP_1901 hypothetical protein YP_005056198.1 KEGG: aba:Acid345_0670 hypothetical protein YP_005056199.1 KEGG: aca:ACP_1643 hypothetical protein YP_005056200.1 KEGG: aca:ACP_1488 hypothetical protein YP_005056201.1 KEGG: hvo:HVO_1134 hypothetical protein YP_005056202.1 KEGG: aca:ACP_1478 oxidoreductase, short chain dehydrogenase/reductase family; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056203.1 KEGG: shl:Shal_2645 hypothetical protein YP_005056204.1 KEGG: fbc:FB2170_14373 hypothetical protein YP_005056205.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: sus:Acid_1271 OmpA/MotB domain-containing protein YP_005056206.1 TIGRFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain; KEGG: aba:Acid345_2742 fumarase; PFAM: Fe-S hydro-lyase, tartrate dehydratase alpha-type, catalytic domain; Fe-S hydro-lyase, tartrate dehydratase beta-type, catalytic domain YP_005056207.1 KEGG: cbr:CBG05265 Hypothetical protein CBG05265 YP_005056208.1 PFAM: ABC transporter-like; KEGG: aca:ACP_1482 putative daunorubicin resistance ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005056209.1 KEGG: aca:ACP_1483 ABC transporter, permease protein YP_005056210.1 PFAM: NHL repeat; KEGG: mac:MA2021 hypothetical protein YP_005056211.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: aca:ACP_1486 pyridine nucleotide-disulfide oxidoreductase family YP_005056212.1 KEGG: aba:Acid345_1759 hypothetical protein YP_005056213.1 KEGG: hoh:Hoch_0525 tetratricopeptide TPR_2 repeat protein YP_005056214.1 KEGG: aca:ACP_1472 FtsK/SpoIIIE family protein; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase FtsK gamma; SMART: DNA translocase FtsK gamma; ATPase, AAA+ type, core YP_005056215.1 KEGG: bmj:BMULJ_03125 hypothetical protein YP_005056216.1 KEGG: psp:PSPPH_1192 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02284; PFAM: Domain of unknown function DUF2383 YP_005056217.1 KEGG: sli:Slin_5051 hypothetical protein YP_005056218.1 PFAM: Bacitracin resistance protein BacA; KEGG: aca:ACP_2396 putative undecaprenol kinase YP_005056219.1 PFAM: Zinc/iron permease; KEGG: sna:Snas_1529 zinc/iron permease YP_005056220.1 KEGG: ote:Oter_3918 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005056221.1 PFAM: Signal transduction response regulator, chemotaxis, protein-glutamate methylesterase; MCP methyltransferase, CheR-type, SAM-binding domain, C-terminal; MCP methyltransferase, CheR-type, all-alpha domain, N-terminal; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: ava:Ava_0314 signal transduction histidine kinase (STHK) with CheB and CheR activity; SMART: MCP methyltransferase, CheR-type; ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS YP_005056222.1 KEGG: aba:Acid345_1548 molybdenum-pterin binding protein; TIGRFAM: Molybdenum-pterin binding; Excisionase/Xis, DNA-binding; PFAM: Transport-associated OB, type 1 YP_005056223.1 PFAM: TonB-dependent receptor, plug; KEGG: bid:Bind_0859 TonB-dependent siderophore receptor YP_005056224.1 PFAM: Bacterial extracellular solute-binding, family 1; KEGG: pol:Bpro_2497 tungstate/molybdate binding protein YP_005056225.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005056226.1 KEGG: aba:Acid345_4242 beta-mannosidase; PFAM: Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel YP_005056227.1 KEGG: ote:Oter_3370 TPR repeat-containing protein YP_005056228.1 KEGG: cro:ROD_24901 putative sugar transporter; TIGRFAM: Sugar/inositol transporter; PFAM: General substrate transporter YP_005056229.1 KEGG: aca:ACP_0066 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D YP_005056230.1 KEGG: aba:Acid345_0908 LacI family transcription regulator; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_005056231.1 PFAM: Glycoside hydrolase, family 97; KEGG: ccs:CCNA_00838 alpha-glucosidase YP_005056232.1 PFAM: Aldose 1-epimerase; KEGG: gym:GYMC10_4393 hypothetical protein YP_005056233.1 PFAM: Cupin 2, conserved barrel; KEGG: msl:Msil_1874 cupin 2 conserved barrel domain protein YP_005056234.1 KEGG: gvi:gll2260 oxidoreductase; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 1; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like YP_005056235.1 KEGG: ara:Arad_0724 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056236.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bge:BC1002_4174 transcriptional regulator, TetR family YP_005056238.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: scl:sce5181 3-carboxymuconate cyclase YP_005056239.1 KEGG: sus:Acid_3407 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005056240.1 KEGG: sus:Acid_3408 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005056241.1 PFAM: Acriflavin resistance protein; KEGG: sus:Acid_3409 acriflavin resistance protein YP_005056242.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bte:BTH_I3119 transcriptional regulatory protein YP_005056243.1 KEGG: ddd:Dda3937_01181 xylosidase/arabinosidase; PFAM: Glycoside hydrolase, family 43 YP_005056244.1 KEGG: aca:ACP_2408 hypothetical protein YP_005056245.1 KEGG: mxa:MXAN_3914 PepSY-associated TM helix domain-containing protein YP_005056246.1 TIGRFAM: Cyanase; KEGG: mno:Mnod_1707 cyanate hydratase; PFAM: Cyanate lyase, C-terminal YP_005056247.1 KEGG: meh:M301_1345 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005056248.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: mlo:mll5399 transcriptional regulator YP_005056249.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mrb:Mrub_2943 major facilitator superfamily MFS_1 YP_005056250.1 PFAM: Carbohydrate/purine kinase; KEGG: rde:RD1_2419 ribokinase, putative YP_005056251.1 KEGG: rcp:RCAP_rcp00006 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR YP_005056252.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_2155 Cna protein B-type domain protein YP_005056253.1 KEGG: aba:Acid345_0977 hypothetical protein YP_005056254.1 KEGG: pfl:PFL_2254 hypothetical protein YP_005056255.1 PFAM: Carbohydrate/purine kinase; KEGG: sus:Acid_4808 ribokinase-like domain-containing protein YP_005056256.1 PFAM: Protein of unknown function DUF481; KEGG: aca:ACP_1643 hypothetical protein YP_005056257.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cak:Caul_5087 TetR family transcriptional regulator YP_005056258.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: pol:Bpro_2349 short-chain dehydrogenase/reductase SDR YP_005056259.1 KEGG: sus:Acid_1749 putative acetyl xylan esterase YP_005056260.1 PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; KEGG: ote:Oter_2278 glycoside hydrolase family protein YP_005056261.1 KEGG: sus:Acid_5553 peptidase M56, BlaR1; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738; Peptidase M56, BlaR1 YP_005056262.1 PFAM: Penicillinase repressor; KEGG: mmr:Mmar10_1882 CopY family transcriptional regulator YP_005056264.1 KEGG: aca:ACP_0065 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005056265.1 KEGG: rxy:Rxyl_2600 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005056266.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_2934 TonB-dependent receptor YP_005056267.1 KEGG: gym:GYMC10_4405 carbohydrate binding family 6; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG YP_005056268.1 KEGG: aba:Acid345_4242 beta-mannosidase; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel YP_005056269.1 KEGG: aca:ACP_0066 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D YP_005056270.1 KEGG: aca:ACP_3288 putative sensory transcriptional regulator; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; GAF; ANTAR; SMART: GAF YP_005056271.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobG-like; KEGG: caa:Caka_0346 precorrin-3B synthase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like YP_005056272.1 KEGG: caa:Caka_0623 sulfite reductase (NADPH) flavoprotein, alpha chain; PFAM: FAD-binding, type 1; Flavodoxin/nitric oxide synthase; Oxidoreductase FAD/NAD(P)-binding YP_005056273.1 PFAM: DMSO reductase anchor subunit (DmsC); KEGG: sus:Acid_0182 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_005056274.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; Molybdopterin oxidoreductase, Fe4S4 domain; KEGG: sus:Acid_0183 molybdopterin oxidoreductase; SMART: Molybdopterin oxidoreductase, Fe4S4 domain YP_005056275.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mrd:Mrad2831_2916 major facilitator transporter YP_005056276.1 KEGG: aba:Acid345_2441 hypothetical protein YP_005056277.1 KEGG: sus:Acid_6331 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005056278.1 KEGG: sth:STH1737 hypothetical protein YP_005056279.1 KEGG: msu:MS2229 RseA protein YP_005056280.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: vap:Vapar_3938 transcriptional regulator, TetR family YP_005056281.1 KEGG: cpi:Cpin_5653 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056282.1 KEGG: bur:Bcep18194_B1453 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005056283.1 PFAM: Methyltransferase type 11; KEGG: aba:Acid345_0880 amidohydrolase YP_005056284.1 KEGG: aba:Acid345_0879 radical SAM family Fe-S protein; PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005056285.1 PFAM: Methyltransferase type 12; KEGG: aba:Acid345_0877 hypothetical protein YP_005056286.1 KEGG: aba:Acid345_0876 radical SAM family Fe-S protein; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; SMART: Elongator protein 3/MiaB/NifB YP_005056287.1 KEGG: aba:Acid345_0874 radical SAM family Fe-S protein; PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005056288.1 KEGG: aba:Acid345_0873 radical SAM family Fe-S protein; PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005056289.1 KEGG: sus:Acid_6633 HPr(Ser) kinase/phosphatase YP_005056290.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rlg:Rleg_2527 transcriptional regulator, TetR family YP_005056291.1 KEGG: ppy:PPE_04899 putative ketoacyl reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056292.1 KEGG: bpy:Bphyt_6333 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056293.1 PFAM: Methyltransferase type 11; KEGG: gau:GAU_3004 hypothetical protein YP_005056294.1 PFAM: Protein of unknown function DUF899, thioredoxin-like; KEGG: aba:Acid345_1333 protein of unknown function DUF899, thioredoxin-like YP_005056295.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: sus:Acid_3367 hypothetical protein YP_005056296.1 KEGG: nfa:nfa21810 putative transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005056297.1 PFAM: Uncharacterised protein family, YqcI/YcgG; KEGG: bxe:Bxe_C0002 hypothetical protein YP_005056298.1 PFAM: Fatty acid hydroxylase; KEGG: bxe:Bxe_C0001 hypothetical protein YP_005056299.1 KEGG: aca:ACP_1302 putative transcriptional regulatory protein; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal YP_005056300.1 KEGG: aca:ACP_2822 nonpeptidase homolog, peptidase S53 family; PFAM: Peptidase S53, propeptide; SMART: Peptidase S53, propeptide YP_005056301.1 KEGG: aba:Acid345_0764 hypothetical protein YP_005056302.1 TIGRFAM: Phosphonoacetaldehyde hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; KEGG: rca:Rcas_0966 phosphonoacetaldehyde hydrolase; PFAM: Haloacid dehalogenase-like hydrolase YP_005056303.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ppu:PP_2548 major facilitator transporter YP_005056304.1 KEGG: sus:Acid_3085 hypothetical protein YP_005056305.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ppf:Pput_3167 major facilitator transporter YP_005056306.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6854 Cna B-type protein YP_005056307.1 PFAM: Amidohydrolase 3; KEGG: sli:Slin_0803 amidohydrolase 3 YP_005056308.1 TIGRFAM: 2-aminoethylphosphonate--pyruvate transaminase; 2-aminoethylphosphonate aminotransferase; KEGG: pjd:Pjdr2_4350 2-aminoethylphosphonate/pyruvate transaminase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_005056309.1 KEGG: bur:Bcep18194_B0754 NAD(P)H dehydrogenase (quinone); HAMAP: NADH-azoreductase, FMN-dependent; PFAM: Flavodoxin-like fold YP_005056310.1 KEGG: aba:Acid345_1302 hypothetical protein YP_005056311.1 KEGG: bgf:BC1003_5602 NmrA family protein YP_005056312.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bxe:Bxe_A2697 putative daunorubicin C-13 ketoreductase YP_005056313.1 PFAM: Polyketide cyclase/dehydrase; KEGG: msu:MS1404 hypothetical protein YP_005056314.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: bvi:Bcep1808_5850 LysR family transcriptional regulator YP_005056315.1 KEGG: mta:Moth_1234 6-phosphofructokinase; PFAM: Phosphofructokinase domain YP_005056316.1 PFAM: Carbohydrate/purine kinase; KEGG: aca:ACP_0858 putative 2-dehydro-3-deoxygluconokinase YP_005056317.1 PFAM: Sugar isomerase (SIS); KEGG: aca:ACP_0859 putative tagatose-6-phosphate aldose/ketose isomerase YP_005056318.1 PFAM: D-tagatose-bisphosphate aldolase, class II, non-catalytic subunit AgaZ; KEGG: vfi:VF_A1005 tagatose 6-phosphate aldolase 1 subunit KbaZ YP_005056319.1 KEGG: aca:ACP_0857 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal YP_005056320.1 KEGG: aca:ACP_0862 hypothetical protein YP_005056321.1 PFAM: Amidohydrolase 2; KEGG: rba:RB2092 hypothetical protein YP_005056322.1 KEGG: sus:Acid_2907 NHL repeat-containing protein YP_005056323.1 KEGG: sus:Acid_4741 hypothetical protein YP_005056324.1 KEGG: sus:Acid_6590 oxidoreductase domain-containing protein; PFAM: Oxidoreductase, N-terminal YP_005056325.1 KEGG: nde:NIDE3608 hypothetical protein YP_005056326.1 PFAM: Sugar isomerase (SIS); KEGG: aca:ACP_0859 putative tagatose-6-phosphate aldose/ketose isomerase YP_005056327.1 KEGG: rcu:RCOM_1511940 hypothetical protein YP_005056328.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_2170 TonB-dependent receptor, plug YP_005056329.1 PFAM: Oxidoreductase, N-terminal; KEGG: sus:Acid_6247 oxidoreductase domain-containing protein YP_005056330.1 KEGG: sus:Acid_2170 TonB-dependent receptor, plug YP_005056331.1 PFAM: Amidohydrolase 2; KEGG: fbc:FB2170_01577 hypothetical protein YP_005056332.1 KEGG: aca:ACP_0856 melibiase family/PKD domain protein; PFAM: Glycoside hydrolase, clan GH-D; PKD domain; SMART: PKD/Chitinase domain YP_005056333.1 PFAM: Amino acid permease domain; KEGG: aca:ACP_0855 amino acid transporter, amino acid-polyamine-organocation (APC) family YP_005056334.1 KEGG: gym:GYMC10_1212 glucosamine-6-phosphate deaminase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase YP_005056335.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sus:Acid_7221 major facilitator transporter YP_005056337.1 KEGG: aca:ACP_0857 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal YP_005056338.1 KEGG: sus:Acid_6775 Cna B domain-containing protein YP_005056339.1 PFAM: Squalene/phytoene synthase; KEGG: bpy:Bphyt_4026 squalene/phytoene synthase YP_005056340.1 KEGG: aca:ACP_0729 putative lipoprotein; TIGRFAM: Outer membrane insertion C-terminal signal, omp85; PFAM: TonB-dependent receptor, plug YP_005056341.1 KEGG: sus:Acid_6350 hypothetical protein YP_005056342.1 PFAM: Domain of unknown function DUF218; KEGG: zpr:ZPR_1627 hypothetical protein YP_005056343.1 KEGG: sus:Acid_2765 TonB-dependent receptor, plug YP_005056344.1 KEGG: sus:Acid_1827 hypothetical protein YP_005056345.1 PFAM: Protein of unknown function DUF1624; KEGG: nhl:Nhal_2920 hypothetical protein YP_005056346.1 PFAM: Domain of unknown function DUF1793; KEGG: aca:ACP_2528 glutaminase A YP_005056347.1 KEGG: aca:ACP_0330 sialate O-acetylesterase homolog; PFAM: Domain of unknown function DUF303, acetylesterase putative YP_005056348.1 PFAM: General substrate transporter; KEGG: reu:Reut_B3627 major facilitator transporter YP_005056349.1 KEGG: yli:YALI0F14927g YALI0F14927p YP_005056350.1 PFAM: Adenosine/AMP deaminase; KEGG: aca:ACP_1968 adenosine/AMP deaminase family protein YP_005056351.1 KEGG: mem:Memar_0961 hypothetical protein YP_005056352.1 TIGRFAM: Alpha-glucan phosphorylase; KEGG: aca:ACP_2293 alpha-glucan phosphorylase; PFAM: Glycosyl transferase, family 35 YP_005056353.1 KEGG: npu:Npun_AF180 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005056354.1 TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; KEGG: sus:Acid_1167 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_005056355.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: cyh:Cyan8802_1348 NAD-dependent epimerase/dehydratase YP_005056356.1 PFAM: Cupin 2, conserved barrel; KEGG: bph:Bphy_6639 cupin 2 domain-containing protein YP_005056357.1 KEGG: gme:Gmet_1010 alkylhydroperoxidase AhpD core; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase YP_005056358.1 KEGG: rxy:Rxyl_0136 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/classII; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_005056359.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: aca:ACP_2288 putative peroxiredoxin bcp YP_005056360.1 PFAM: Polysaccharide deacetylase; KEGG: aca:ACP_1974 putative polysaccharide deacetylase YP_005056361.1 PFAM: Protein of unknown function DUF2911; KEGG: aba:Acid345_1594 hypothetical protein YP_005056362.1 PFAM: Glycine cleavage system P-protein, N-terminal; KEGG: aca:ACP_2099 glycine dehydrogenase subunit 2 YP_005056363.1 KEGG: chl:Chy400_3947 hypothetical protein YP_005056364.1 KEGG: aca:ACP_2098 glycine dehydrogenase subunit 1; PFAM: Glycine cleavage system P-protein, N-terminal YP_005056365.1 KEGG: aca:ACP_2097 glycine cleavage system protein H; TIGRFAM: Glycine cleavage H-protein, subgroup; PFAM: Glycine cleavage H-protein YP_005056366.1 TIGRFAM: Glycine cleavage system T protein; KEGG: aca:ACP_2096 glycine cleavage system aminomethyltransferase T; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel YP_005056367.1 KEGG: aba:Acid345_2105 hypothetical protein YP_005056368.1 KEGG: aca:ACP_1897 hypothetical protein YP_005056369.1 KEGG: sml:Smlt0798 putative inner membrane transport permease YP_005056370.1 KEGG: aca:ACP_1895 hypothetical protein YP_005056371.1 TIGRFAM: Glucose-1-phosphate adenylyltransferase; KEGG: aca:ACP_1894 glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase YP_005056372.1 KEGG: aca:ACP_2095 hypothetical protein YP_005056373.1 KEGG: pth:PTH_2173 peptidoglycan-binding domain-containing protein YP_005056374.1 KEGG: aca:ACP_2093 twin-arginine translocation protein, TatA/E family; TIGRFAM: Twin-arginine translocation protein TatA/E; PFAM: Bacterial sec-independent translocation protein MttA/Hcf106 YP_005056375.1 KEGG: aba:Acid345_0575 polyphosphate:AMP phosphotransferase; TIGRFAM: Polyphosphate:nucleotide phosphotransferase, PPK2; PFAM: Polyphosphate kinase-2-related YP_005056376.1 PFAM: Drug/metabolite transporter; KEGG: mbu:Mbur_1659 hypothetical protein YP_005056377.1 KEGG: aca:ACP_1762 hypothetical protein; TIGRFAM: VWFA-related, acidobacterial-type; SMART: von Willebrand factor, type A YP_005056378.1 KEGG: sus:Acid_1238 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005056379.1 KEGG: aca:ACP_1760 hypothetical protein; TIGRFAM: VWFA-related, acidobacterial-type; SMART: von Willebrand factor, type A YP_005056380.1 KEGG: aca:ACP_2335 putative phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; PFAM: Histidine biosynthesis YP_005056381.1 TIGRFAM: Histidine biosynthesis, HisF; KEGG: aca:ACP_2336 imidazole glycerol phosphate synthase subunit HisF; PFAM: Histidine biosynthesis YP_005056382.1 KEGG: lic:LIC11964 hypothetical protein YP_005056383.1 KEGG: aca:ACP_2337 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; PFAM: Glutamine amidotransferase class-I, C-terminal YP_005056384.1 KEGG: aca:ACP_2338 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase YP_005056386.1 TIGRFAM: Histidinol-phosphate aminotransferase; KEGG: aca:ACP_2339 histidinol-phosphate transaminase; PFAM: Aminotransferase, class I/classII YP_005056387.1 TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; KEGG: aca:ACP_2340 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type YP_005056388.1 KEGG: rer:RER_14010 hypothetical protein YP_005056389.1 TIGRFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal; KEGG: aca:ACP_2341 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase, catalytic domain; Histidine biosynthesis HisG, C-terminal YP_005056390.1 PFAM: Phosphoribosyl-AMP cyclohydrolase; KEGG: aca:ACP_2342 phosphoribosyl-AMP cyclohydrolase YP_005056391.1 KEGG: sus:Acid_6900 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005056392.1 PFAM: Carbonic anhydrase; KEGG: pmy:Pmen_4475 carbonate dehydratase; SMART: Carbonic anhydrase YP_005056393.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: cyn:Cyan7425_0955 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_005056394.1 KEGG: aca:ACP_2822 nonpeptidase homolog, peptidase S53 family; PFAM: Peptidase S53, propeptide; SMART: Peptidase S53, propeptide YP_005056395.1 KEGG: sus:Acid_6398 HNH endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease YP_005056396.1 PFAM: Protein of unknown function DUF583; KEGG: aca:ACP_2015 hypothetical protein YP_005056397.1 KEGG: aca:ACP_1856 hypothetical protein YP_005056398.1 SMART: RNA-binding domain, S1; TIGRFAM: Translation initiation factor IF-1; KEGG: aba:Acid345_1249 translation initiation factor IF-1; HAMAP: Translation initiation factor IF-1; PFAM: RNA-binding domain, S1, IF1 type YP_005056399.1 TIGRFAM: Ribosomal protein L36; HAMAP: Ribosomal protein L36; KEGG: aca:ACP_1427 50S ribosomal protein L36; PFAM: Ribosomal protein L36 YP_005056400.1 KEGG: aca:ACP_1426 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; PFAM: Ribosomal protein S13 YP_005056401.1 KEGG: aca:ACP_1425 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; PFAM: Ribosomal protein S11 YP_005056402.1 KEGG: sal:Sala_2340 ABC transporter related YP_005056403.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: RNA-binding S4; Ribosomal protein S4/S9, N-terminal; KEGG: aca:ACP_1424 ribosomal protein S4; SMART: RNA-binding S4 YP_005056404.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase, alpha subunit, C-terminal; DNA-directed RNA polymerase, insert domain; DNA-directed RNA polymerase, dimerisation; KEGG: aca:ACP_1423 DNA-directed RNA polymerase subunit alpha; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type YP_005056405.1 KEGG: aca:ACP_1422 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; PFAM: Ribosomal protein L17 YP_005056406.1 KEGG: aca:ACP_1742 efflux ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_005056407.1 KEGG: aca:ACP_1741 putative transporter YP_005056408.1 PFAM: Domain of unknown function DUF374; KEGG: aca:ACP_1740 hypothetical protein YP_005056409.1 KEGG: aca:ACP_1739 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; PFAM: Queuosine biosynthesis protein YP_005056410.1 TIGRFAM: DNA polymerase 1; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, SAM-fold domain; 5'-3' exonuclease, alpha-helical arch, N-terminal; KEGG: aca:ACP_1738 DNA polymerase I; SMART: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2 YP_005056411.1 manually curated; TIGRFAM: Addiction module killer protein, HI1419; KEGG: btr:Btr_0316 hypothetical protein; PFAM: Protein of unknown function DUF891 YP_005056412.1 KEGG: pna:Pnap_4139 putative transcriptional regulator YP_005056413.1 TIGRFAM: Formyltetrahydrofolate deformylase; KEGG: mei:Msip34_2601 formyltetrahydrofolate deformylase; PFAM: Formyl transferase, N-terminal YP_005056414.1 TIGRFAM: Phosphoglucosamine mutase; KEGG: aca:ACP_1737 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal YP_005056415.1 TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aba:Acid345_3993 von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_005056416.1 KEGG: sus:Acid_1173 alpha/beta hydrolase YP_005056417.1 PFAM: Thioredoxin domain; KEGG: aca:ACP_1880 thioredoxin family homolog YP_005056418.1 PFAM: Ribonuclease BN-related; KEGG: aca:ACP_1881 YihY family protein YP_005056419.1 TIGRFAM: Pyruvate kinase; KEGG: aca:ACP_1882 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, C-terminal-like YP_005056420.1 KEGG: mlo:mlr2192 O-acetyltransferase, NodL; manually curated YP_005056421.1 TIGRFAM: DNA mismatch repair protein, N-terminal; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATPase-like, ATP-binding domain; KEGG: aca:ACP_1883 DNA mismatch repair protein MutL; SMART: MutL, C-terminal, dimerisation; ATPase-like, ATP-binding domain YP_005056422.1 KEGG: aca:ACP_1885 hypothetical protein YP_005056423.1 KEGG: aca:ACP_1887 cytidylate kinase; TIGRFAM: Cytidylate kinase; PFAM: Cytidylate kinase domain YP_005056424.1 KEGG: aca:ACP_2296 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_005056425.1 KEGG: mms:mma_1860 short chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056426.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rlg:Rleg_3554 transcriptional regulator, TetR family YP_005056427.1 KEGG: aba:Acid345_1842 hypothetical protein YP_005056428.1 PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: sus:Acid_7549 protein of unknown function DUF894, DitE YP_005056429.1 TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: aba:Acid345_3424 XRE family plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3 YP_005056430.1 PFAM: Plasmid maintenance system killer; KEGG: aba:Acid345_3425 plasmid maintenance system killer YP_005056431.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: 2-oxoglutarate dehydrogenase, E1 component; KEGG: aca:ACP_0050 2-oxoglutarate dehydrogenase E1 component; PFAM: Transketolase-like, pyrimidine-binding domain; Dehydrogenase, E1 component YP_005056432.1 KEGG: rcu:RCOM_0886440 structural constituent of cell wall, putative YP_005056433.1 PFAM: Prolipoprotein diacylglyceryl transferase; KEGG: aba:Acid345_2135 prolipoprotein diacylglyceryl transferase YP_005056434.1 KEGG: tcu:Tcur_0334 carbon starvation protein CstA YP_005056435.1 PFAM: Radical SAM; KEGG: aba:Acid345_2134 radical SAM family Fe-S protein YP_005056436.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005056437.1 PFAM: Ribonuclease II/R; KEGG: sus:Acid_5497 exoribonuclease II; SMART: Ribonuclease II/R; RNA-binding domain, S1 YP_005056438.1 KEGG: aca:ACP_3141 TonB-dependent receptor domain protein YP_005056440.1 PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: aba:Acid345_2376 hypothetical protein YP_005056442.1 PFAM: Lipase, GDSL; KEGG: ote:Oter_4273 pectinesterase YP_005056443.1 KEGG: rpe:RPE_1412 hypothetical protein; PFAM: RES; SMART: RES YP_005056444.1 TIGRFAM: Conserved hypothetical protein CHP02293; KEGG: bmj:BMULJ_06171 hypothetical protein YP_005056445.1 KEGG: psa:PST_4152 phosphoglucomutase; TIGRFAM: Phosphoglucomutase, alpha-D-glucose specific; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal YP_005056446.1 PFAM: S1/P1 nuclease; KEGG: aca:ACP_1728 hypothetical protein YP_005056447.1 KEGG: ppg:PputGB1_2375 putative ribosomal protein S1 YP_005056448.1 PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: aca:ACP_0986 nicotinate phosphoribosyltransferase YP_005056449.1 KEGG: mct:MCR_1636 RelA/SpoT domain protein; PFAM: RelA/SpoT; SMART: RelA/SpoT YP_005056450.1 KEGG: ccs:CCNA_02316 hypothetical protein YP_005056451.1 KEGG: cse:Cseg_2883 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005056453.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: cak:Caul_1667 alpha/beta hydrolase fold protein YP_005056454.1 KEGG: aca:ACP_1729 deoxyhypusine synthase-like protein; PFAM: Deoxyhypusine synthase YP_005056455.1 KEGG: aca:ACP_1723 putative uridine kinase; PFAM: Phosphoribulokinase/uridine kinase YP_005056456.1 TIGRFAM: Inosine guanosine/xanthosine phosphorylase; Purine nucleoside phosphorylase I, inosine/guanosine-specific; KEGG: bmd:BMD_4381 purine nucleoside phosphorylase; PFAM: Nucleoside phosphorylase domain YP_005056457.1 PFAM: Plasmid stabilisation system; KEGG: aca:ACP_3203 RelE/ParE family plasmid stabilization system protein YP_005056458.1 KEGG: ava:Ava_1707 hypothetical protein YP_005056459.1 PFAM: Na dependent nucleoside transporter, C-terminal; Na dependent nucleoside transporter; Nucleoside recognition; KEGG: aca:ACP_1720 nucleoside:Na+ symporter, concentrative nucleoside transporter (CNT) family YP_005056460.1 KEGG: aba:Acid345_1894 cold-shock DNA-binding protein family protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_005056461.1 KEGG: aba:Acid345_0250 hypothetical protein YP_005056462.1 SMART: Pyrimidine nucleoside phosphorylase, C-terminal; TIGRFAM: Pyrimidine-nucleoside phosphorylase, bacterial/eukaryotic; KEGG: aca:ACP_1719 pyrimidine-nucleoside phosphorylase; PFAM: Glycosyl transferase, family 3; Pyrimidine nucleoside phosphorylase, C-terminal; Glycosyl transferase, family 3, N-terminal YP_005056463.1 KEGG: aca:ACP_1718 cytidine deaminase; TIGRFAM: Cytidine deaminase, homotetrameric; PFAM: CMP/dCMP deaminase, zinc-binding YP_005056464.1 TIGRFAM: Pilus retraction protein PilT; PFAM: Type II secretion system protein E; KEGG: sus:Acid_1587 twitching motility protein; SMART: ATPase, AAA+ type, core YP_005056465.1 KEGG: aca:ACP_1717 DEAD/DEAH box helicase domain protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; ATPase, AAA+ type, core YP_005056466.1 PFAM: Peptidase S41; KEGG: rmr:Rmar_0124 carboxyl-terminal protease YP_005056467.1 KEGG: swi:Swit_1411 hypothetical protein YP_005056468.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: mlo:mll2253 hypothetical protein YP_005056469.1 KEGG: mlo:mll2255 transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005056470.1 KEGG: fra:Francci3_1347 malto-oligosyltrehalose trehalohydrolase YP_005056471.1 KEGG: sus:Acid_3131 putative secreted protein YP_005056472.1 PFAM: Domain of unknown function DUF305; KEGG: sus:Acid_3130 hypothetical protein YP_005056473.1 KEGG: aba:Acid345_2902 LuxR family transcriptional regulator; PFAM: Transcription regulator LuxR, C-terminal; SMART: Transcription regulator LuxR, C-terminal YP_005056474.1 KEGG: aba:Acid345_2901 hypothetical protein YP_005056475.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_1060 hypothetical protein YP_005056476.1 KEGG: sjp:SJA_C1-01700 phenazine biosynthesis protein YP_005056477.1 SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat; manually curated; KEGG: sus:Acid_3225 transcriptional regulator domain-containing protein; PFAM: Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-1 YP_005056478.1 KEGG: sus:Acid_7543 periplasmic component of the Tol biopolymer transport system-like protein; manually curated; PFAM: WD40-like Beta Propeller YP_005056479.1 manually curated; KEGG: ote:Oter_2198 periplasmic component of the Tol biopolymer transport system-like protein YP_005056480.1 KEGG: fbc:FB2170_01985 hypothetical protein YP_005056481.1 KEGG: tpr:Tpau_3216 hypothetical protein YP_005056482.1 KEGG: dap:Dacet_2365 DNA-directed DNA polymerase YP_005056483.1 PFAM: Rhamnose mutarotase; KEGG: hne:HNE_2132 hypothetical protein YP_005056484.1 PFAM: Domain of unknown function DUF162; KEGG: aca:ACP_0001 YkgG family protein YP_005056485.1 KEGG: aca:ACP_0002 iron-sulfur cluster binding protein; TIGRFAM: Iron-sulphur cluster binding protein; PFAM: Domain of unknown function DUF162 YP_005056486.1 KEGG: aca:ACP_0003 cysteine-rich domain protein; manually curated; PFAM: Cysteine-rich domain YP_005056487.1 PFAM: RhaT l-rhamnose-proton symport 2; KEGG: sus:Acid_5934 rhamnose-proton symporter YP_005056488.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: aca:ACP_0556 L-rhamnose isomerase YP_005056489.1 PFAM: Transcription regulator IclR, N-terminal; Periplasmic binding protein/LacI transcriptional regulator; KEGG: aca:ACP_0557 putative sugar uptake ABC transporter, solute-binding protein YP_005056490.1 KEGG: aca:ACP_0558 short chain dehydrogenase; TIGRFAM: Bifunctional rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; Class II aldolase/adducin, N-terminal YP_005056491.1 KEGG: aca:ACP_0559 rhamnulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal YP_005056492.1 PFAM: Amino acid permease domain; KEGG: mbn:Mboo_1999 amino acid permease-associated region YP_005056493.1 KEGG: aca:ACP_0537 hypothetical protein YP_005056494.1 KEGG: sus:Acid_0070 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005056495.1 KEGG: aca:ACP_1249 KdpE; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005056496.1 KEGG: sus:Acid_4530 hypothetical protein YP_005056497.1 KEGG: sus:Acid_5873 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_005056498.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: sli:Slin_0049 oxidoreductase domain protein YP_005056499.1 PFAM: Uncharacterised protein family YphA; KEGG: sno:Snov_2940 DoxX family protein YP_005056500.1 PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; KEGG: sus:Acid_0537 methylated-DNA-(protein)-cysteine S-methyltransferase YP_005056501.1 PFAM: Uracil-DNA glycosylase-like; KEGG: bph:Bphy_5004 uracil-DNA glycosylase superfamily protein YP_005056502.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sli:Slin_1290 acetyltransferase-like protein YP_005056503.1 KEGG: bpt:Bpet4649 putative methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Methylguanine DNA methyltransferase, ribonuclease-like YP_005056504.1 KEGG: wbr:WGLp461 hypothetical protein YP_005056505.1 KEGG: mei:Msip34_0689 pyridoxal-dependent decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase YP_005056506.1 KEGG: drm:Dred_3190 phenylacetate--CoA ligase YP_005056507.1 KEGG: fre:Franean1_4144 hypothetical protein YP_005056508.1 KEGG: vcj:VCD_000452 hypothetical protein YP_005056509.1 KEGG: fre:Franean1_4144 hypothetical protein YP_005056510.1 KEGG: vcj:VCD_000452 hypothetical protein YP_005056511.1 PFAM: Major intrinsic protein; KEGG: npu:Npun_F2213 major intrinsic protein YP_005056512.1 KEGG: nde:NIDE0029 formate hydrogenlyase transcriptional activator; PFAM: RNA polymerase sigma factor 54, interaction; GAF; Helix-turn-helix, Fis-type; SMART: GAF; ATPase, AAA+ type, core YP_005056513.1 manually curated; TIGRFAM: Conserved hypothetical protein CHP03440; KEGG: aca:ACP_1952 hypothetical protein; PFAM: Sulphatase-modifying factor YP_005056514.1 KEGG: dev:DhcVS_1078 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005056515.1 KEGG: bts:Btus_3269 fructose-1,6-bisphosphate aldolase, class II; PFAM: Ketose-bisphosphate aldolase, class-II YP_005056516.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bcj:BCAL1139 putative hydrolase YP_005056517.1 KEGG: rlg:Rleg_2690 hypothetical protein YP_005056518.1 KEGG: bpy:Bphyt_7173 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056519.1 PFAM: Protein of unknown function DUF1211, TMEM175; KEGG: rlg:Rleg_2689 protein of unknown function DUF1211 YP_005056520.1 KEGG: aca:ACP_2671 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005056521.1 PFAM: Protein of unknown function DUF417; KEGG: shl:Shal_1288 hypothetical protein YP_005056522.1 KEGG: bph:Bphy_6297 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_005056523.1 PFAM: Protein of unknown function DUF1624; KEGG: nhl:Nhal_0009 hypothetical protein YP_005056524.1 KEGG: fjo:Fjoh_0898 ankyrin; PFAM: Ankyrin repeat; SMART: Ankyrin repeat YP_005056525.1 KEGG: fjo:Fjoh_0897 ankyrin YP_005056526.1 PFAM: Patatin/Phospholipase A2-related; KEGG: cdl:CDR20291_2073 patatin-like phospholipase YP_005056528.1 KEGG: aba:Acid345_4776 hypothetical protein YP_005056529.1 PFAM: Malectin; KEGG: sus:Acid_3489 hypothetical protein YP_005056530.1 KEGG: aba:Acid345_2387 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 16; Fibronectin, type III; Malectin; SMART: Fibronectin, type III YP_005056531.1 PFAM: Malectin; KEGG: cai:Caci_3492 coagulation factor 5/8 type domain protein YP_005056533.1 KEGG: ava:Ava_1387 BNR repeat-containing glycosyl hydrolase YP_005056535.1 TIGRFAM: Sulphate adenylyltransferase, small subunit; KEGG: sus:Acid_6512 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase YP_005056536.1 TIGRFAM: Sulphate adenylyltransferase, large subunit; KEGG: sus:Acid_6513 sulfate adenylyltransferase subunit 1; PFAM: Protein synthesis factor, GTP-binding YP_005056537.1 KEGG: aba:Acid345_0830 phosphoadenylylsulfate reductase (thioredoxin); PFAM: Phosphoadenosine phosphosulphate reductase YP_005056538.1 KEGG: aca:ACP_2322 putative xanthine dehydrogenase accessory factor; PFAM: XdhC- CoxI YP_005056539.1 KEGG: scl:sce3338 hypothetical protein YP_005056540.1 KEGG: psa:PST_2875 acyl carrier protein YP_005056541.1 KEGG: aca:ACP_0840 hypothetical protein YP_005056542.1 KEGG: aca:ACP_0841 hypothetical protein YP_005056543.1 SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain; TIGRFAM: Trehalose synthase/alpha-amylase, N-terminal; Trehalose synthase/probable maltokinase, C-terminal; KEGG: aca:ACP_0842 trehalose synthase/probable maltokinase; PFAM: Glycosyl hydrolase, family 13, catalytic domain YP_005056544.1 PFAM: Protein of unknown function DUF3416; Glycosyl hydrolase, family 13, catalytic domain; KEGG: aca:ACP_0843 alpha-amylase family protein YP_005056545.1 PFAM: Glycoside hydrolase 15-related; KEGG: aca:ACP_3016 glycosyl hydrolase, family 15 YP_005056546.1 TIGRFAM: Malto-oligosyltrehalose synthase; KEGG: aca:ACP_2719 (1->4)-alpha-D-glucan 1-alpha-D-glucosylmutase; PFAM: Glycosyl hydrolase, family 13, catalytic domain YP_005056547.1 TIGRFAM: Malto-oligosyltrehalose trehalohydrolase; KEGG: aca:ACP_2720 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal YP_005056548.1 PFAM: NUDIX hydrolase domain; KEGG: aba:Acid345_4737 NUDIX hydrolase YP_005056549.1 TIGRFAM: DNA-3-methyladenine glycosylase I; KEGG: sjp:SJA_C1-00460 DNA-3-methyladenine glycosylase I; PFAM: Methyladenine glycosylase YP_005056550.1 SMART: von Willebrand factor, type A; KEGG: aca:ACP_1715 hypothetical protein YP_005056551.1 PFAM: Methyltransferase type 12; KEGG: atu:Atu4202 methyltransferase YP_005056552.1 PFAM: Methyltransferase type 11; KEGG: cpc:Cpar_1142 methyltransferase type 12 YP_005056553.1 PFAM: RNA polymerase sigma factor 54, interaction; KEGG: aca:ACP_1714 putative magnesium chelatase, ChlI subunit YP_005056554.1 KEGG: aba:Acid345_3254 hypothetical protein YP_005056555.1 PFAM: Thioesterase superfamily; KEGG: aca:ACP_1711 thioesterase domain protein YP_005056556.1 PFAM: ATPase-like, ParA/MinD; KEGG: aca:ACP_1710 hypothetical protein YP_005056557.1 KEGG: aca:ACP_2086 heat-inducible transcription repressor HrcA; TIGRFAM: Winged helix-turn-helix transcription repressor, HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA, C-terminal YP_005056558.1 PFAM: GrpE nucleotide exchange factor; KEGG: aca:ACP_2087 co-chaperone GrpE YP_005056559.1 TIGRFAM: Chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; Heat shock protein DnaJ, N-terminal; KEGG: aca:ACP_2088 chaperone protein DnaJ; SMART: Heat shock protein DnaJ, N-terminal YP_005056560.1 KEGG: aca:ACP_2307 16S ribosomal RNA methyltransferase RsmE; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; PFAM: Ribosomal RNA small subunit methyltransferase E YP_005056561.1 PFAM: Abortive infection protein; KEGG: aca:ACP_2308 protease, CAAX amino terminal family YP_005056562.1 TIGRFAM: Thiolase; KEGG: aca:ACP_2309 acetyl-CoA acetyltransferase family protein; PFAM: Thiolase, N-terminal; Thiolase, C-terminal YP_005056564.1 KEGG: slt:Slit_2958 transcriptional regulator, CopG family YP_005056565.1 TIGRFAM: Iron-sulphur-dependent L-serine dehydratase single chain form; KEGG: aca:ACP_2311 L-serine ammonia-lyase; PFAM: Serine dehydratase-like, alpha subunit; Serine dehydratase beta chain YP_005056566.1 KEGG: sus:Acid_3525 hypothetical protein YP_005056567.1 PFAM: Protein of unknown function DUF2239; Aminoglycoside phosphotransferase; KEGG: cse:Cseg_2267 aminoglycoside phosphotransferase YP_005056568.1 PFAM: HEAT; KEGG: sus:Acid_1899 heat repeat-containing PBS lyase YP_005056569.1 TIGRFAM: Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; Peptidase S16, Lon C-terminal; KEGG: aca:ACP_1980 putative Mg chelatase; SMART: ATPase, AAA+ type, core YP_005056570.1 KEGG: cpv:cgd1_3220 erythrocyte membrane-associated antigen YP_005056571.1 KEGG: aca:ACP_2496 hypothetical protein YP_005056572.1 TIGRFAM: Transcription termination factor Rho; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, N-terminal; Rho termination factor, RNA-binding; KEGG: aca:ACP_2495 transcription termination factor Rho; SMART: Cold shock protein; ATPase, AAA+ type, core; Rho termination factor, N-terminal YP_005056574.1 TIGRFAM: Lumazine-binding protein; KEGG: aca:ACP_3415 riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein YP_005056575.1 TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; KEGG: aca:ACP_3414 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding YP_005056576.1 TIGRFAM: Cell division transporter substrate-binding protein FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: aca:ACP_3413 signal recognition particle-docking protein FtsY; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core YP_005056577.1 PFAM: Domain of unknown function DUF820; KEGG: sus:Acid_5455 hypothetical protein YP_005056578.1 PFAM: Glycerol-3-phosphate dehydrogenase, NAD-dependent, N-terminal; Glycerol-3-phosphate dehydrogenase, NAD-dependent, C-terminal; KEGG: aca:ACP_3411 glycerol-3-phosphate dehydrogenase (NAD(+)) YP_005056579.1 KEGG: aca:ACP_3410 acyl-phosphate glycerol 3-phosphate acyltransferase; TIGRFAM: Glycerol-3-phosphate acyltransferase, bacteria; PFAM: Glycerol-3-phosphate acyltransferase, bacteria YP_005056580.1 TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; PFAM: CinA, C-terminal; Molybdopterin binding; KEGG: aca:ACP_3409 CinA homolog; SMART: Molybdopterin binding YP_005056581.1 KEGG: gme:Gmet_0489 hypothetical protein YP_005056582.1 KEGG: gau:GAU_1038 hypothetical membrane protein YP_005056583.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: aba:Acid345_2141 hypothetical protein YP_005056584.1 PFAM: Phosphatidylglycerophosphatase A; KEGG: aca:ACP_3407 phosphatidylglycerophosphatase A YP_005056585.1 PFAM: Uncharacterised protein family, zinc-binding; KEGG: aca:ACP_3406 hypothetical protein YP_005056586.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; KEGG: aca:ACP_3405 RNA modification enzyme, MiaB-family; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; PFAM: Methylthiotransferase, N-terminal; Radical SAM YP_005056587.1 PFAM: Helix-turn-helix, HxlR type; KEGG: bmj:BMULJ_03344 putative transcriptional regulator YP_005056588.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: swi:Swit_3334 short-chain dehydrogenase/reductase SDR YP_005056589.1 KEGG: ava:Ava_3329 Ap4A phosphorylase II YP_005056590.1 KEGG: dpe:Dper_GL18691 GL18691 gene product from transcript GL18691-RA YP_005056591.1 KEGG: aba:Acid345_1078 PgPepO oligopeptidase; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal YP_005056592.1 KEGG: aca:ACP_1993 MutS domain protein; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; SMART: DNA mismatch repair protein MutS, C-terminal YP_005056593.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); KEGG: aca:ACP_3048 3-oxoacyl-(acyl-carrier-protein) synthase III YP_005056594.1 PFAM: SNARE associated Golgi protein; KEGG: aba:Acid345_3343 membrane protein YP_005056595.1 KEGG: aca:ACP_3417 hypothetical protein YP_005056596.1 KEGG: aca:ACP_3418 DNA protecting protein DprA; TIGRFAM: DNA recombination-mediator protein A; PFAM: DNA recombination-mediator protein A YP_005056597.1 SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain; TIGRFAM: DNA topoisomerase I, bacterial-type; KEGG: aca:ACP_3419 DNA topoisomerase; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger YP_005056598.1 PFAM: Protein of unknown function DUF427; KEGG: aca:ACP_3423 hypothetical protein YP_005056599.1 KEGG: spa:M6_Spy1173 LPXTG anchored putative adhesin YP_005056600.1 KEGG: sus:Acid_2818 hypothetical protein YP_005056601.1 KEGG: mbr:MONBRDRAFT_28659 hypothetical protein YP_005056602.1 TIGRFAM: Acetohydroxy acid isomeroreductase; KEGG: aca:ACP_3464 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal YP_005056603.1 KEGG: aca:ACP_3465 acetolactate synthase small subunit; TIGRFAM: Acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT YP_005056604.1 KEGG: der:Dere_GG20351 GG20351 gene product from transcript GG20351-RA YP_005056605.1 TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; KEGG: aca:ACP_3466 acetolactate synthase, large subunit, biosynthetic type; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain YP_005056606.1 KEGG: rlt:Rleg2_1040 hypothetical protein YP_005056607.1 TIGRFAM: Dihydroxy-acid dehydratase; KEGG: aca:ACP_3467 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase YP_005056608.1 KEGG: aca:ACP_3468 3-isopropylmalate dehydratase, small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_005056609.1 KEGG: aca:ACP_3469 isopropylmalate isomerase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha YP_005056610.1 KEGG: kra:Krad_4616 chromosome partitioning ATPase YP_005056611.1 TIGRFAM: Isopropylmalate dehydrogenase; KEGG: aca:ACP_3470 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase YP_005056612.1 KEGG: aca:ACP_3471 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase YP_005056613.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aca:ACP_3472 transcriptional regulator, LysR family YP_005056614.1 KEGG: gur:Gura_1984 hypothetical protein YP_005056615.1 KEGG: aca:ACP_3473 hypothetical protein YP_005056616.1 KEGG: aca:ACP_0690 hypothetical protein YP_005056617.1 KEGG: aca:ACP_3475 hypothetical protein YP_005056618.1 KEGG: aca:ACP_3477 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005056619.1 PFAM: Protein of unknown function DUF421; KEGG: sus:Acid_7855 membrane protein-like protein YP_005056620.1 TIGRFAM: Acetate-CoA ligase; KEGG: aca:ACP_2811 acetate--CoA ligase; PFAM: AMP-dependent synthetase/ligase YP_005056621.1 KEGG: aca:ACP_3204 hypothetical protein YP_005056622.1 KEGG: aca:ACP_3203 RelE/ParE family plasmid stabilization system protein; manually curated; PFAM: Plasmid stabilisation system YP_005056623.1 KEGG: sus:Acid_4536 ketosteroid isomerase-like protein YP_005056624.1 PFAM: FecR protein; KEGG: vcn:VOLCADRAFT_99506 hypothetical protein YP_005056625.1 PFAM: Sodium:dicarboxylate symporter; KEGG: aba:Acid345_2088 sodium--dicarboxylate symporter YP_005056626.1 KEGG: nca:Noca_3201 phosphoesterase; PFAM: Phosphoesterase YP_005056628.1 KEGG: hdn:Hden_1520 hypothetical protein YP_005056629.1 KEGG: aca:ACP_2149 xylanase YP_005056630.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: fre:Franean1_4596 TetR family transcriptional regulator YP_005056631.1 KEGG: fjo:Fjoh_3999 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056632.1 KEGG: aca:ACP_2461 adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; PFAM: Lyase 1, N-terminal; Adenylosuccinate lyase C-terminal metazoa/fungi YP_005056633.1 KEGG: aba:Acid345_2951 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005056634.1 KEGG: sus:Acid_7899 CBS domain-containing protein; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core YP_005056635.1 PFAM: Glutaredoxin; KEGG: aba:Acid345_2784 glutaredoxin YP_005056636.1 KEGG: aba:Acid345_1823 hypothetical protein; manually curated; PFAM: Domain of unknown function DUF302 YP_005056637.1 KEGG: aba:Acid345_0013 hypothetical protein YP_005056638.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: aca:ACP_3015 glucose 1-dehydrogenase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_005056639.1 PFAM: Protein of unknown function DUF3175; KEGG: aca:ACP_3503 hypothetical protein YP_005056640.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: aca:ACP_1748 cytidine and deoxycytidylate deaminase zinc-binding region YP_005056641.1 KEGG: nhl:Nhal_1083 hypothetical protein YP_005056642.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aba:Acid345_4427 glyoxalase/bleomycin resistance protein/dioxygenase YP_005056643.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: ret:RHE_CH02579 dihydrofolate reductase protein YP_005056644.1 KEGG: ptr:471623 chondroitin sulfate synthase 3 YP_005056645.1 KEGG: aca:ACP_1746 peptidyl-arginine deiminase family protein; PFAM: Peptidyl-arginine deiminase, Porphyromonas-type YP_005056646.1 PFAM: Protein of unknown function DUF433; KEGG: rrs:RoseRS_4375 hypothetical protein YP_005056647.1 KEGG: rrs:RoseRS_0654 hypothetical protein YP_005056648.1 PFAM: Redoxin; KEGG: tye:THEYE_A0252 thiol-disulfide oxidoreductase ResA YP_005056649.1 KEGG: sus:Acid_1238 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005056650.1 KEGG: mmu:223825 XVHEAT repeat family member 7B2 YP_005056651.1 KEGG: hse:Hsero_3486 hypothetical protein YP_005056652.1 PFAM: Protein of unknown function DUF3455; KEGG: msl:Msil_2141 hypothetical protein YP_005056653.1 KEGG: sth:STH1718 polysaccharide deacetylase YP_005056654.1 KEGG: hch:HCH_03879 hypothetical protein YP_005056655.1 KEGG: aca:ACP_1745 hydrolase, carbon-nitrogen family; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_005056656.1 KEGG: amr:AM1_A0134 PilT domain-containing protein; PFAM: PilT protein, N-terminal; SMART: Nucleotide binding protein, PINc YP_005056657.1 KEGG: gvi:gsl3799 hypothetical protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein YP_005056658.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp; KEGG: aca:ACP_0595 glutamate--ammonia ligase YP_005056659.1 TIGRFAM: Isocitrate dehydrogenase NADP-dependent, prokaryotic; KEGG: aca:ACP_0089 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase YP_005056660.1 PFAM: PilT protein, N-terminal; KEGG: hde:HDEF_0976 addiction module, PIN domain protein YP_005056661.1 KEGG: bts:Btus_3182 prevent-host-death family protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein YP_005056662.1 TIGRFAM: Malate dehydrogenase, NAD-dependent; KEGG: aba:Acid345_1951 malate dehydrogenase (NAD); PFAM: Lactate/malate dehydrogenase, N-terminal; Lactate/malate dehydrogenase, C-terminal YP_005056663.1 KEGG: aca:ACP_0095 peptidyl-prolyl cis-trans isomerase, cyclophilin-type, putative; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_005056664.1 KEGG: aca:ACP_0096 peptidylprolyl cis-trans isomerase, cyclophilin-type, putative; PFAM: Peptidyl-prolyl cis-trans isomerase, cyclophilin-type YP_005056665.1 KEGG: bpy:Bphyt_4937 hypothetical protein YP_005056666.1 KEGG: aba:Acid345_2579 membrane dipeptidase; PFAM: Peptidase M19, renal dipeptidase YP_005056668.1 PFAM: Domain of unknown function DUF336; KEGG: aba:Acid345_2769 hypothetical protein YP_005056669.1 KEGG: aca:ACP_2618 hypothetical protein YP_005056670.1 PFAM: Domain of unknown function DUF1851; KEGG: sus:Acid_6460 hypothetical protein YP_005056671.1 PFAM: Transposase IS200-like; KEGG: chu:CHU_1441 transposase YP_005056672.1 KEGG: aba:Acid345_2572 succinate dehydrogenase iron-sulfur subunit; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein YP_005056673.1 KEGG: cbr:CBG10839 Hypothetical protein CBG10839 YP_005056674.1 KEGG: pno:SNOG_14701 hypothetical protein YP_005056675.1 TIGRFAM: Succinate dehydrogenase/fumarate reductase, flavoprotein subunit, low-GC Gram-positive bacteria; KEGG: aba:Acid345_2571 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_005056676.1 PFAM: Succinate dehydrogenase/Fumarate reductase, transmembrane subunit; KEGG: aba:Acid345_2570 succinate dehydrogenase subunit C YP_005056677.1 PFAM: Ham1-like protein; TIGRFAM: Ham1-like protein; HAMAP: Nucleoside-triphosphatase; KEGG: aca:ACP_0104 RdgB protein YP_005056678.1 PFAM: Protein of unknown function DUF318, transmembrane; KEGG: mbt:JTY_2979 putative integral membrane protein YP_005056679.1 KEGG: aba:Acid345_2202 glycosyl hydrolase YP_005056680.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: aca:ACP_0113 efflux ABC transporter, permease/ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005056681.1 PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; KEGG: sus:Acid_4147 peptidylprolyl isomerase, FKBP-type YP_005056682.1 PFAM: Permease YjgP/YjgQ, predicted; KEGG: aca:ACP_0114 permease, YjgP/YjgQ family YP_005056683.1 KEGG: sus:Acid_2403 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005056684.1 KEGG: aba:Acid345_4169 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005056685.1 KEGG: aba:Acid345_4171 delta-9 acyl-phospholipid desaturase; PFAM: Fatty acid desaturase, type 1 YP_005056686.1 KEGG: sus:Acid_2867 hypothetical protein YP_005056687.1 PFAM: Peptidoglycan binding-like; KEGG: aba:Acid345_1434 peptidoglycan binding domain-containing protein YP_005056688.1 KEGG: aba:Acid345_1435 peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF YP_005056689.1 PFAM: Drug/metabolite transporter; KEGG: aca:ACP_0272 DMT transporter, 10 TMS drug/metabolite exporter (DME) family YP_005056690.1 PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: aca:ACP_0689 peptidase, M20/M25/M40 family YP_005056691.1 KEGG: aca:ACP_0688 tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_005056692.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_0687 outer membrane efflux protein family YP_005056693.1 KEGG: aca:ACP_0267 hypothetical protein YP_005056694.1 PFAM: Mechanosensitive ion channel MscS; KEGG: aca:ACP_3158 transporter, MscS family YP_005056695.1 PFAM: Dehydrogenase, E1 component; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; KEGG: aca:ACP_3156 putative pyruvate dehydrogenase, E1 component; SMART: Transketolase-like, pyrimidine-binding domain YP_005056696.1 PFAM: Protein of unknown function DUF1800; KEGG: aba:Acid345_2867 hypothetical protein YP_005056697.1 PFAM: Protein of unknown function DUF1501; KEGG: aba:Acid345_2868 hypothetical protein YP_005056698.1 KEGG: aca:ACP_0724 hypothetical protein YP_005056699.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: aca:ACP_0722 iron-sulfur cluster-binding protein, Rieske family YP_005056700.1 TIGRFAM: Carbamoyl-phosphate synthase, small subunit; KEGG: aca:ACP_0686 carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal YP_005056701.1 KEGG: sbl:Sbal_4391 helix-turn-helix protein, CopG YP_005056702.1 KEGG: tgr:Tgr7_3231 hypothetical protein; TIGRFAM: Addiction module toxin, RelE/StbE; PFAM: Plasmid stabilisation system YP_005056703.1 SMART: Methylglyoxal synthase-like domain; TIGRFAM: Carbamoyl-phosphate synthase, large subunit; KEGG: aca:ACP_0685 carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Carbamoyl-phosphate synthetase, large subunit, oligomerisation; Methylglyoxal synthase-like domain; Carbamoyl-phosphate synthase, large subunit, N-terminal YP_005056704.1 PFAM: Dihydrodipicolinate synthetase; KEGG: aca:ACP_0327 dihydrodipicolinate synthetase family protein YP_005056705.1 PFAM: Negative transcriptional regulator; KEGG: met:M446_6596 FMN-binding negative transcriptional regulator YP_005056706.1 KEGG: sus:Acid_1238 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005056707.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: aca:ACP_1550 transcriptional regulator, PadR family YP_005056708.1 KEGG: aca:ACP_1549 hypothetical protein YP_005056709.1 KEGG: aba:Acid345_0590 TPR repeat-containing protein YP_005056710.1 PFAM: Outer membrane protein, OmpA/MotB, C-terminal; KEGG: aca:ACP_0501 OmpA family protein YP_005056711.1 PFAM: TolB, N-terminal; WD40-like Beta Propeller; KEGG: aca:ACP_0502 TolB protein, putative YP_005056712.1 KEGG: aca:ACP_0503 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005056713.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aca:ACP_0504 transport energizing protein, ExbD/TolR family YP_005056714.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: aca:ACP_0505 transporter, MotA/TolQ/ExbB proton channel family YP_005056715.1 KEGG: dvm:DvMF_1455 DNA-directed RNA polymerase subunit beta YP_005056716.1 KEGG: aca:ACP_0506 DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; PFAM: RecF/RecN/SMC YP_005056717.1 KEGG: sro:Sros_1017 hypothetical protein YP_005056718.1 PFAM: LytB protein; TIGRFAM: LytB protein; HAMAP: LytB protein; KEGG: aca:ACP_3328 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_005056719.1 TIGRFAM: Squalene cyclase; Hopene cyclase; KEGG: aca:ACP_3329 squalene-hopene cyclase; PFAM: Prenyltransferase/squalene oxidase YP_005056720.1 TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnH; PFAM: Domain of unknown function DUF3463; Radical SAM; KEGG: aca:ACP_3330 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_005056721.1 KEGG: aca:ACP_3331 hypothetical protein YP_005056722.1 KEGG: aca:ACP_0818 NAD dependent epimerase/dehydratase family protein; TIGRFAM: Hopanoid-associated sugar epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_005056723.1 PFAM: Nucleoside phosphorylase domain; KEGG: aca:ACP_0817 hypothetical protein YP_005056724.1 KEGG: aca:ACP_0816 oxidoreductase, zinc-binding dehydrogenase family; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal YP_005056725.1 KEGG: bja:bll3013 hypothetical protein YP_005056726.1 KEGG: mcu:HMPREF0573_10390 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_005056727.1 PFAM: Metallo-dependent phosphatase; KEGG: sus:Acid_1096 metallophosphoesterase YP_005056728.1 PFAM: Cytochrome c, class I; KEGG: sus:Acid_1097 cytochrome c, class I YP_005056729.1 KEGG: tcx:Tcr_2099 hypothetical protein YP_005056730.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: aca:ACP_0457 cytochrome c oxidase subunit III homolog YP_005056731.1 KEGG: sus:Acid_5590 cytochrome-c oxidase; PFAM: Cytochrome c oxidase, subunit I YP_005056732.1 PFAM: Cytochrome c oxidase subunit II C-terminal; KEGG: sus:Acid_5589 cytochrome c oxidase, subunit II YP_005056733.1 KEGG: aca:ACP_0458 glutamine amidotransferase subunit PdxT; TIGRFAM: Glutamine amidotransferase subunit PdxT; PFAM: Glutamine amidotransferase subunit PdxT YP_005056734.1 KEGG: cpi:Cpin_5201 hypothetical protein YP_005056735.1 PFAM: Vitamin B6 biosynthesis protein; KEGG: aba:Acid345_1856 pyridoxal biosynthesis lyase PdxS YP_005056736.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: aba:Acid345_0621 peptidase M16-like YP_005056737.1 PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; KEGG: aba:Acid345_0622 peptidase M16-like YP_005056738.1 TIGRFAM: Polyphosphate kinase; KEGG: aca:ACP_3449 polyphosphate kinase; PFAM: Polyphosphate kinase YP_005056739.1 KEGG: cin:100185055 similar to predicted protein YP_005056740.1 TIGRFAM: Methylmalonate-semialdehyde dehydrogenase; KEGG: bid:Bind_0175 methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain YP_005056741.1 KEGG: aca:ACP_3506 putative DNA ligase, ATP-dependent; TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain; DNA polymerase LigD, ligase domain; DNA ligase D, 3'-phosphoesterase domain; PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, C-terminal; DNA primase, small subunit YP_005056742.1 KEGG: aca:ACP_3505 Ku protein; TIGRFAM: Ku, prokaryotic type; PFAM: DNA helicase, ATP-dependent, Ku type YP_005056743.1 PFAM: Fumarylacetoacetase, C-terminal-like; KEGG: aca:ACP_3402 hypothetical protein YP_005056744.1 PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; KEGG: bvu:BVU_1809 beta-glycosidase YP_005056745.1 KEGG: aca:ACP_0277 Ser/Thr protein phosphatase family protein; TIGRFAM: Conserved hypothetical protein CHP00282; PFAM: Metallo-dependent phosphatase YP_005056746.1 PFAM: Aminotransferase, class I/classII; KEGG: bte:BTH_II1967 aminotransferase family protein YP_005056747.1 KEGG: aor:AO090005001598 hypothetical protein YP_005056749.1 PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; TIGRFAM: Lysyl-tRNA synthetase, class II; HAMAP: Lysyl-tRNA synthetase, class II; KEGG: aca:ACP_0278 lysine--tRNA ligase YP_005056750.1 KEGG: aca:ACP_0280 hypothetical protein YP_005056751.1 KEGG: aba:Acid345_1298 hypothetical protein YP_005056752.1 KEGG: aba:Acid345_1299 ATP synthase F0, A subunit; TIGRFAM: ATPase, F0 complex, subunit A; PFAM: ATPase, F0 complex, subunit A YP_005056753.1 PFAM: ATPase, F0/V0 complex, subunit C; KEGG: aca:ACP_0283 ATP synthase F0 subunit C YP_005056754.1 TIGRFAM: NAD(P)H-quinone oxidoreductase, subunit N/subunit 2; KEGG: aca:ACP_0284 NADH dehydrogenase I, N subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase YP_005056755.1 TIGRFAM: NADH-quinone oxidoreductase, chain M/4; KEGG: aca:ACP_0285 NADH dehydrogenase I, M subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 4, N-terminal YP_005056756.1 TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; KEGG: aca:ACP_0286 NADH dehydrogenase I, L subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; NADH:ubiquinone/plastoquinone oxidoreductase, chloroplast chain 5, C-terminal YP_005056757.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L/K; KEGG: aca:ACP_0287 NADH dehydrogenase I, K subunit YP_005056758.1 PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; KEGG: aca:ACP_0288 NADH dehydrogenase subunit J YP_005056759.1 KEGG: aca:ACP_0289 NADH dehydrogenase I, H subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit 1/F420H2 oxidoreductase subunit H YP_005056760.1 PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase; Ferredoxin; Molybdopterin oxidoreductase, Fe4S4 domain; KEGG: aca:ACP_0290 NADH dehydrogenase I, G subunit; SMART: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase, Fe4S4 domain YP_005056761.1 KEGG: aca:ACP_3001 hypothetical protein YP_005056762.1 SMART: NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; TIGRFAM: NADH ubiquinone oxidoreductase, F subunit; KEGG: aca:ACP_0291 NADH dehydrogenase I, F subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_005056763.1 TIGRFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; KEGG: aca:ACP_0292 NADH dehydrogenase I, E subunit; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit YP_005056764.1 KEGG: ssl:SS1G_14256 hypothetical protein YP_005056765.1 TIGRFAM: NADH dehydrogenase I, subunit D; KEGG: aca:ACP_0294 NADH dehydrogenase I, D subunit; PFAM: NADH-quinone oxidoreductase, subunit D YP_005056766.1 KEGG: aca:ACP_0295 NADH dehydrogenase I, C subunit; TIGRFAM: NADH dehydrogenase, subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit YP_005056767.1 KEGG: aca:ACP_0296 NADH dehydrogenase I, A subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3 YP_005056768.1 KEGG: aca:ACP_0170 prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV YP_005056769.1 KEGG: cak:Caul_4365 hypothetical protein YP_005056770.1 PFAM: Carbohydrate-selective porin OprB; KEGG: aca:ACP_0305 hypothetical protein YP_005056771.1 PFAM: Acyltransferase 3; KEGG: sus:Acid_2251 acyltransferase 3 YP_005056772.1 KEGG: aca:ACP_0534 thiazole synthase; HAMAP: Thiazole biosynthesis; PFAM: Thiazole biosynthesis YP_005056773.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rlt:Rleg2_0480 transcriptional regulator, TetR family YP_005056774.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: bpy:Bphyt_3970 short-chain dehydrogenase/reductase SDR YP_005056775.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: sus:Acid_5138 hypothetical protein YP_005056776.1 KEGG: sus:Acid_1238 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005056777.1 TIGRFAM: Pyrophosphate-energised proton pump; KEGG: aca:ACP_3157 membrane-bound proton-translocating pyrophosphatase; PFAM: Pyrophosphate-energised proton pump YP_005056778.1 KEGG: cbc:CbuK_1433 hypothetical membrane spanning protein YP_005056779.1 TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aca:ACP_1008 von Willebrand factor type A domain protein; SMART: von Willebrand factor, type A YP_005056780.1 KEGG: aca:ACP_1007 cysteine synthase A; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005056781.1 KEGG: aca:ACP_0820 AMP-binding enzyme; PFAM: AMP-dependent synthetase/ligase YP_005056782.1 PFAM: Acid phosphatase (Class B); KEGG: sen:SACE_3235 acid phosphatase, class B YP_005056783.1 PFAM: Beta-lactamase-like; KEGG: scb:SCAB_12751 hypothetical protein YP_005056784.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: aca:ACP_0126 transcriptional regulator, MerR family YP_005056785.1 KEGG: aca:ACP_0760 regulator of cell autolysis; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005056786.1 TIGRFAM: Enolase; KEGG: aca:ACP_0300 phosphopyruvate hydratase; PFAM: Enolase, C-terminal; Enolase, N-terminal YP_005056787.1 KEGG: art:Arth_2393 ribonuclease YP_005056788.1 TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: aca:ACP_0302 phosphoglyceromutase; PFAM: Metalloenzyme; BPG-independent PGAM, N-terminal YP_005056789.1 PFAM: Uncharacterised protein family UPF0175; KEGG: cyt:cce_4997 hypothetical protein YP_005056790.1 PFAM: Protein of unknown function DUF3368; KEGG: cyt:cce_3220 hypothetical protein YP_005056791.1 KEGG: acr:Acry_2003 acid phosphatase; PFAM: Metallo-dependent phosphatase YP_005056792.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005056793.1 KEGG: aca:ACP_0511 recombination protein RecR; TIGRFAM: RecR protein; SMART: Toprim domain; Helix-hairpin-helix DNA-binding motif, class 1 YP_005056794.1 KEGG: aca:ACP_0492 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0133; PFAM: Uncharacterised protein family UPF0133 YP_005056795.1 TIGRFAM: DNA polymerase III, subunit gamma/ tau; PFAM: ATPase, AAA-type, core; KEGG: aca:ACP_0491 DNA polymerase III, subunits gamma and tau; SMART: ATPase, AAA+ type, core YP_005056796.1 KEGG: aca:ACP_0167 SET domain protein; PFAM: SET domain; SMART: SET domain; Post-SET domain YP_005056797.1 PFAM: Tetratricopeptide TPR2; KEGG: aca:ACP_0168 hypothetical protein YP_005056798.1 PFAM: Cytochrome C biogenesis protein CcmH; KEGG: aba:Acid345_3206 hypothetical protein YP_005056799.1 PFAM: Cytochrome c assembly protein; KEGG: aca:ACP_2781 cytochrome c-type biogenesis protein CcmF YP_005056800.1 KEGG: aca:ACP_2780 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005056801.1 PFAM: Cupin 2, conserved barrel; KEGG: psl:Psta_3522 cupin 2 conserved barrel domain protein YP_005056802.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: aca:ACP_0332 serine/threonine-protein kinase; SMART: Tetratricopeptide repeat YP_005056803.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005056804.1 KEGG: aca:ACP_0299 hypothetical protein YP_005056805.1 PFAM: Glycosyl transferase, group 1; KEGG: aca:ACP_0761 glycosyl transferase, group 1 family YP_005056806.1 PFAM: Uncharacterised protein family UPF0249/HpnK; KEGG: aca:ACP_0759 hypothetical protein YP_005056807.1 TIGRFAM: Ketopantoate hydroxymethyltransferase; KEGG: aca:ACP_2003 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_005056808.1 KEGG: aca:ACP_2002 pantoate--beta-alanine ligase; TIGRFAM: Pantoate-beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_005056809.1 TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; KEGG: aca:ACP_0613 phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein, C-terminal; Flavoprotein YP_005056810.1 PFAM: Quinolinate synthetase A; TIGRFAM: Quinolinate synthetase A; HAMAP: Quinolinate synthase A; KEGG: lxx:Lxx16490 quinolinate synthetase YP_005056811.1 TIGRFAM: L-aspartate oxidase; KEGG: xce:Xcel_0349 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal YP_005056812.1 TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; KEGG: lxx:Lxx16510 nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal YP_005056813.1 KEGG: lxx:Lxx16520 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_005056814.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_1489 hypothetical protein YP_005056815.1 KEGG: syg:sync_2679 enantiomer-selective amidase; PFAM: Amidase YP_005056816.1 KEGG: syg:sync_2679 enantiomer-selective amidase; PFAM: Amidase YP_005056817.1 PFAM: Drug/metabolite transporter; KEGG: bbe:BBR47_11890 hypothetical protein YP_005056818.1 KEGG: syg:sync_2679 enantiomer-selective amidase; PFAM: Amidase YP_005056819.1 KEGG: sus:Acid_3262 TPR repeat-containing serine/threonin protein kinase YP_005056820.1 KEGG: pjd:Pjdr2_1411 GCN5-related N-acetyltransferase; manually curated; PFAM: GCN5-related N-acetyltransferase (GNAT) domain YP_005056821.1 KEGG: sus:Acid_0152 hypothetical protein YP_005056822.1 KEGG: sus:Acid_0153 polymorphic membrane protein; TIGRFAM: Domain of unknown function DUF11; Polymorphic membrane protein, Chlamydia; PFAM: FG-GAP YP_005056823.1 KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005056824.1 PFAM: Phage tail collar; KEGG: mlo:mll4442 microcystin dependent protein MdpB YP_005056825.1 PFAM: Phage tail collar; KEGG: sus:Acid_0150 phage tail collar domain-containing protein YP_005056826.1 PFAM: Phage tail collar; KEGG: sus:Acid_0149 phage tail collar domain-containing protein YP_005056827.1 KEGG: nve:NEMVE_v1g209555 hypothetical protein YP_005056828.1 KEGG: aba:Acid345_1361 hypothetical protein YP_005056829.1 TIGRFAM: Acetate kinase; KEGG: gau:GAU_2221 acetate kinase; PFAM: Acetate/butyrate kinase YP_005056830.1 PFAM: Protein of unknown function DUF159; KEGG: aba:Acid345_3891 hypothetical protein YP_005056831.1 KEGG: bpt:Bpet0581 hypothetical protein YP_005056832.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: aba:Acid345_4311 dehydrogenases related protein YP_005056833.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: aba:Acid345_4310 sugar phosphate isomerase/epimerase YP_005056834.1 PFAM: Thiamine synthesis ApbE/UPF0280; KEGG: sus:Acid_5201 ApbE family lipoprotein YP_005056835.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: zpr:ZPR_2991 putative hydrogenase YP_005056836.1 KEGG: aca:ACP_2410 alpha-glucosidase II; PFAM: Glycoside hydrolase, family 31 YP_005056837.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: afw:Anae109_0597 glucose-6-phosphate 1-dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding YP_005056838.1 KEGG: rme:Rmet_2094 NAD-dependent epimerase/dehydratase YP_005056839.1 PFAM: Helix-turn-helix, HxlR type; KEGG: bra:BRADO6176 MarR family transcriptional regulator YP_005056840.1 KEGG: aca:ACP_1645 hypothetical protein YP_005056841.1 KEGG: cak:Caul_2730 hypothetical protein YP_005056842.1 KEGG: cbd:CBUD_0086 hypothetical protein YP_005056843.1 KEGG: sun:SUN_1525 hypothetical protein YP_005056844.1 PFAM: Polysaccharide deacetylase; KEGG: bbe:BBR47_42490 hypothetical protein YP_005056845.1 PFAM: Glycosyl transferase, group 1; KEGG: cpo:COPRO5265_0428 glycosyl transferases group 1 YP_005056846.1 KEGG: hdn:Hden_1351 acyltransferase 3; manually curated; PFAM: Acyltransferase 3 YP_005056847.1 KEGG: mlo:mll1260 hypothetical protein YP_005056848.1 KEGG: bph:Bphy_1686 hypothetical protein YP_005056849.1 PFAM: Glycosyl transferase, family 2; Methyltransferase type 12; KEGG: afw:Anae109_4444 glycosyl transferase family protein YP_005056850.1 PFAM: Polysaccharide biosynthesis protein CapD-like; KEGG: rrs:RoseRS_4167 polysaccharide biosynthesis protein CapD YP_005056851.1 KEGG: pmt:PMT2147 hypothetical protein YP_005056852.1 KEGG: rmr:Rmar_1153 hypothetical protein YP_005056854.1 KEGG: bpl:BURPS1106A_A1946 putative cell surface protein YP_005056856.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: sfu:Sfum_3987 peptidase S24, S26A and S26B YP_005056857.1 KEGG: sfu:Sfum_2373 HPr kinase YP_005056858.1 KEGG: hoh:Hoch_0311 hypothetical protein YP_005056859.1 PFAM: Radical SAM; KEGG: hoh:Hoch_0444 radical SAM domain protein YP_005056860.1 PFAM: Methyltransferase type 11; KEGG: vei:Veis_4856 methyltransferase type 11 YP_005056861.1 KEGG: cth:Cthe_2342 hypothetical protein YP_005056862.1 KEGG: tit:Thit_0480 UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase,UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_005056863.1 KEGG: min:Minf_0567 rhs family protein fused to TPR repeats YP_005056864.1 TIGRFAM: Exopolysaccharide synthesis protein; KEGG: aba:Acid345_0835 protein-tyrosine kinase; PFAM: Lipopolysaccharide biosynthesis; Cobyrinic acid a,c-diamide synthase YP_005056865.1 PFAM: O-antigen ligase-related; KEGG: dat:HRM2_25580 O-antigen polymerase involved in exopolysaccharide biosynthesis YP_005056866.1 PFAM: Methyltransferase type 11; KEGG: hch:HCH_04637 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benz oquinol methylase YP_005056867.1 PFAM: Glycosyl transferase, group 1; KEGG: rbi:RB2501_13384 putative lipopolysaccharide biosynthesis protein YP_005056868.1 KEGG: avn:Avin_30030 hypothetical protein YP_005056869.1 TIGRFAM: Asparagine synthase, glutamine-hydrolyzing; KEGG: npu:Npun_F1373 asparagine synthase (glutamine-hydrolyzing); PFAM: Asparagine synthase YP_005056870.1 PFAM: Glycosyl transferase, group 1; KEGG: gwc:GWCH70_3258 glycosyl transferase group 1 YP_005056871.1 KEGG: gur:Gura_1698 undecaprenyl-phosphate galactose phosphotransferase; PFAM: Bacterial sugar transferase YP_005056872.1 TIGRFAM: Sialic acid O-acyltransferase, NeuD; KEGG: cha:CHAB381_0951 general glycosylation pathway protein YP_005056873.1 KEGG: dau:Daud_0028 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_005056874.1 PFAM: Polysaccharide export protein; KEGG: aba:Acid345_3311 polysaccharide export protein YP_005056875.1 KEGG: dba:Dbac_0363 hypothetical protein YP_005056876.1 KEGG: dhd:Dhaf_0884 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_005056877.1 PFAM: Nucleotidyl transferase; Cystathionine beta-synthase, core; KEGG: gsu:GSU1968 nucleotidyltransferase family protein YP_005056878.1 PFAM: Domain of unknown function DUF218; KEGG: sus:Acid_3847 hypothetical protein YP_005056879.1 KEGG: tin:Tint_2653 N-acylneuraminate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase YP_005056880.1 SMART: SAF domain; TIGRFAM: N-acetylneuraminate synthase; KEGG: mta:Moth_0756 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal; SAF domain YP_005056881.1 PFAM: Polysaccharide biosynthesis protein; KEGG: rca:Rcas_0772 polysaccharide biosynthesis protein YP_005056882.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_2934 TonB-dependent receptor YP_005056884.1 KEGG: kfl:Kfla_1942 hypothetical protein YP_005056885.1 PFAM: Cupin 2, conserved barrel; KEGG: sus:Acid_5271 cupin 2 domain-containing protein YP_005056886.1 PFAM: Uncharacterised protein family YphA; KEGG: cpi:Cpin_5758 DoxX family protein YP_005056887.1 PFAM: Small multidrug resistance protein; KEGG: mes:Meso_0982 small multidrug resistance protein YP_005056888.1 KEGG: reh:H16_B1784 signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005056889.1 KEGG: rec:RHECIAT_CH0002512 probable two-component response regulator protein; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005056890.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: rlt:Rleg2_2052 alpha/beta hydrolase fold YP_005056891.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sus:Acid_5199 glyoxalase/bleomycin resistance protein/dioxygenase YP_005056892.1 KEGG: msl:Msil_3585 putative cytochrome P460 YP_005056893.1 PFAM: Glutamine amidotransferase class-I, C-terminal; KEGG: azo:azo2531 glutamine amidotransferase YP_005056894.1 KEGG: ani:AN5911.2 hypothetical protein YP_005056895.1 KEGG: reh:H16_B0441 hypothetical protein YP_005056896.1 KEGG: sus:Acid_4026 hypothetical protein YP_005056897.1 KEGG: aba:Acid345_0901 beta-galactosidase; PFAM: Glycoside hydrolase, family 42, N-terminal; Beta-galactosidase trimerisation; Beta-galactosidase C-terminal YP_005056898.1 KEGG: dsy:DSY0542 hypothetical protein YP_005056899.1 PFAM: Uncharacterised protein family YphA; KEGG: aca:ACP_2672 DoxX family protein YP_005056900.1 KEGG: aca:ACP_2671 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2 YP_005056901.1 KEGG: aca:ACP_2670 hypothetical protein YP_005056902.1 KEGG: aca:ACP_2669 hypothetical protein YP_005056903.1 KEGG: bmj:BMULJ_04350 GntR family transcriptional regulator; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR YP_005056904.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: azl:AZL_d03140 glyoxalase/extradiol ring-cleavage dioxygenase YP_005056905.1 KEGG: gbm:Gbem_1549 type IV pilus assembly lipoprotein PilP YP_005056906.1 TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 2; KEGG: aca:ACP_2709 1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase domain YP_005056907.1 PFAM: Glycosyl transferase, family 2; Polysaccharide deacetylase; Glycoside hydrolase, family 18, catalytic domain; KEGG: aca:ACP_3012 polysaccharide deacetylase domain protein/glycosyl transferase, group 2 family protein YP_005056908.1 PFAM: Glycosyl transferase, family 39; KEGG: aca:ACP_3010 hypothetical protein YP_005056909.1 KEGG: aba:Acid345_0393 hypothetical protein YP_005056910.1 KEGG: aca:ACP_3009 hypothetical protein YP_005056911.1 TIGRFAM: Seryl-tRNA synthetase, class IIa; KEGG: aca:ACP_3008 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Seryl-tRNA synthetase, class IIa, N-terminal YP_005056912.1 KEGG: psl:Psta_1647 peptidase S11 D-alanyl-D-alanine carboxypeptidase 1 YP_005056913.1 KEGG: aca:ACP_0158 signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_005056914.1 TIGRFAM: Triosephosphate isomerase; KEGG: aba:Acid345_2544 triosephosphate isomerase; PFAM: Triosephosphate isomerase YP_005056915.1 PFAM: 23S rRNA-associated protein; KEGG: dly:Dehly_1438 30S ribosomal protein S23 YP_005056916.1 KEGG: aca:ACP_0631 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase YP_005056917.1 PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: aca:ACP_2201 hypothetical protein YP_005056918.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sus:Acid_6667 LysR family transcriptional regulator YP_005056919.1 PFAM: Endoribonuclease L-PSP; KEGG: dra:DR_0033 hypothetical protein YP_005056920.1 KEGG: nwa:Nwat_1664 hypothetical protein YP_005056921.1 SMART: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: aca:ACP_0629 glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain YP_005056922.1 KEGG: aca:ACP_0628 polynucleotide kinase domain protein YP_005056923.1 PFAM: ABC transporter-like; KEGG: aca:ACP_0627 amine ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005056924.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aca:ACP_0626 amine ABC transporter, quaternary amine uptake transporter (QAT) family, permease protein YP_005056925.1 PFAM: Uncharacterised protein family UPF0354; KEGG: slt:Slit_1110 hypothetical protein YP_005056926.1 PFAM: ABC-type glycine betaine transport system, substrate-binding domain; KEGG: aca:ACP_0625 amine ABC transporter, quaternary amine uptake transporter (QAT) family, periplasmic amine-binding protein YP_005056927.1 PFAM: Protein of unknown function DUF664; KEGG: aca:ACP_0624 hypothetical protein YP_005056928.1 KEGG: aca:ACP_1971 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005056929.1 KEGG: svi:Svir_26700 transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005056930.1 TIGRFAM: GTP cyclohydrolase II, RibA; KEGG: aca:ACP_0762 GTP cyclohydrolase II; PFAM: GTP cyclohydrolase II, RibA YP_005056931.1 PFAM: Metallo-dependent phosphatase; KEGG: aca:ACP_1059 Ser/Thr protein phosphatase family protein YP_005056932.1 PFAM: Peptidase M24, structural domain; Creatinase; KEGG: aca:ACP_0128 peptidase, M24 family YP_005056933.1 KEGG: aca:ACP_0129 acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; PFAM: Biotin/lipoyl attachment YP_005056934.1 SMART: Biotin carboxylase, C-terminal; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; KEGG: aca:ACP_0131 acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthetase, large subunit, ATP-binding; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal YP_005056935.1 KEGG: aba:Acid345_3286 thiamine-phosphate pyrophosphorylase; TIGRFAM: Thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase YP_005056936.1 PFAM: Amino acid permease domain; KEGG: aca:ACP_0121 amino acid transporter, L-type amino acid transporter (LAT) family YP_005056937.1 PFAM: Amino acid permease domain; KEGG: aba:Acid345_3284 amino acid transporter YP_005056938.1 KEGG: aba:Acid345_1927 hypothetical protein YP_005056939.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: nha:Nham_1409 excinuclease ABC subunit C YP_005056940.1 PFAM: ABC transporter-like; KEGG: aca:ACP_1370 efflux ABC transporter, macrolide exporter (MacB) family, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005056941.1 KEGG: aca:ACP_1369 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005056942.1 KEGG: aca:ACP_0028 SIS domain protein; PFAM: Sugar isomerase (SIS) YP_005056943.1 KEGG: aba:Acid345_3908 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal YP_005056944.1 PFAM: General substrate transporter; KEGG: ote:Oter_1004 general substrate transporter YP_005056945.1 KEGG: msl:Msil_2816 thiamine pyrophosphate protein domain protein TPP-binding; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain YP_005056946.1 KEGG: aba:Acid345_0918 Cna B-type protein YP_005056947.1 KEGG: caa:Caka_0543 nucleoside:H symporter YP_005056948.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; KEGG: aba:Acid345_2761 3-hydroxybutyryl-CoA dehydrogenase YP_005056949.1 KEGG: aca:ACP_0912 hypothetical protein YP_005056950.1 TIGRFAM: Glycoside hydrolase, family 77; KEGG: aca:ACP_1061 4-alpha-glucanotransferase; PFAM: Glycoside hydrolase, family 77 YP_005056951.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; KEGG: aca:ACP_1060 peptidylprolyl cis-trans isomerase, putative YP_005056952.1 PFAM: Transport-associated; KEGG: aca:ACP_1058 phospholipid-binding domain protein YP_005056953.1 KEGG: ote:Oter_3673 fibronectin type III domain-containing protein; PFAM: Malectin; Carbohydrate binding domain, family 6; SMART: Fibronectin, type III YP_005056954.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bph:Bphy_5894 major facilitator transporter YP_005056955.1 KEGG: bph:Bphy_5895 DeoR family transcriptional regulator; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal YP_005056956.1 KEGG: sco:SCO4303 transcriptional regulator; manually curated; PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal YP_005056957.1 KEGG: hse:Hsero_4463 short-chain alcohol dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056958.1 KEGG: dfe:Dfer_0017 hypothetical protein YP_005056959.1 PFAM: Protein of unknown function DUF1470; KEGG: rso:RS05465 hypothetical protein YP_005056960.1 KEGG: mno:Mnod_1453 alcohol dehydrogenase zinc-binding domain protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like YP_005056961.1 KEGG: bpr:GBP346_A1614 esterase YP_005056962.1 KEGG: msl:Msil_2679 hypothetical protein YP_005056963.1 PFAM: Protein of unknown function DUF892; KEGG: aca:ACP_0995 hypothetical protein YP_005056964.1 PFAM: Protein of unknown function DUF2252; KEGG: bpy:Bphyt_5840 hypothetical protein YP_005056965.1 KEGG: pgn:PGN_1811 putative alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29 YP_005056966.1 PFAM: Metallo-dependent phosphatase; KEGG: bph:Bphy_3624 metallophosphoesterase YP_005056967.1 KEGG: bpy:Bphyt_4137 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005056968.1 KEGG: pfo:Pfl01_2206 OsmC-like protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein YP_005056969.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: pfo:Pfl01_2257 alpha/beta hydrolase fold YP_005056970.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aca:ACP_0215 transcriptional regulator, LysR family YP_005056971.1 PFAM: Protein of unknown function DUF1348; KEGG: bte:BTH_II0011 hypothetical protein YP_005056972.1 KEGG: meh:M301_0051 catalase; PFAM: Catalase-related subgroup; Catalase-related immune responsive YP_005056973.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ctc:CTC00144 acetyltransferase YP_005056974.1 PFAM: Drug/metabolite transporter; KEGG: sli:Slin_0610 protein of unknown function DUF6 transmembrane YP_005056975.1 KEGG: ttr:Tter_2202 GHMP kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal YP_005056976.1 KEGG: cob:COB47_0138 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal YP_005056977.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6994 TonB-dependent receptor, plug YP_005056978.1 PFAM: Glycerophosphoryl diester phosphodiesterase; KEGG: sus:Acid_6993 glycerophosphoryl diester phosphodiesterase YP_005056979.1 KEGG: cak:Caul_1370 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005056980.1 PFAM: Protein of unknown function DUF1486; KEGG: smd:Smed_5224 hypothetical protein YP_005056981.1 KEGG: aca:ACP_3077 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005056982.1 KEGG: tgo:TGME49_014600 hypothetical protein YP_005056983.1 PFAM: Glycoside hydrolase, family 31; KEGG: aca:ACP_1639 alpha-xylosidase YP_005056984.1 KEGG: aca:ACP_1071 xylann 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal YP_005056985.1 KEGG: aca:ACP_0910 Cna protein B-type domain protein YP_005056986.1 KEGG: sus:Acid_6084 hypothetical protein YP_005056987.1 PFAM: Phosphoesterase; KEGG: aca:ACP_0118 hypothetical protein YP_005056988.1 KEGG: kol:Kole_1721 cell cycle protein YP_005056989.1 PFAM: Cytochrome c assembly protein; KEGG: aca:ACP_2756 putative heme exporter protein C YP_005056990.1 KEGG: aba:Acid345_1069 outer membrane protein YP_005056991.1 KEGG: aca:ACP_3487 peptidase, family M1 YP_005056992.1 PFAM: Glycosyl transferase, family 19; manually curated; KEGG: aca:ACP_3488 lipid-A-disaccharide synthase; TIGRFAM: Glycosyl transferase, family 19 YP_005056993.1 KEGG: reu:Reut_B4295 hypothetical protein YP_005056994.1 PFAM: Protein of unknown function DUF1905; KEGG: sro:Sros_6953 hypothetical protein YP_005056995.1 KEGG: sus:Acid_3905 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005056996.1 PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: sus:Acid_3904 major facilitator transporter YP_005056997.1 KEGG: sus:Acid_3903 hypothetical protein YP_005056998.1 PFAM: Isochorismatase-like; KEGG: aba:Acid345_2306 isochorismatase hydrolase YP_005056999.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: aca:ACP_3490 efflux ABC transporter, permease/ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057000.1 SMART: Elongator protein 3/MiaB/NifB; manually curated; KEGG: aca:ACP_3491 putative oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal YP_005057001.1 KEGG: aca:ACP_0847 threonine aldolase, low-specificity; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase YP_005057002.1 KEGG: aba:Acid345_3589 hypothetical protein YP_005057003.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: aca:ACP_0937 sporulation kinase A, putative; SMART: ATPase-like, ATP-binding domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005057004.1 KEGG: aba:Acid345_2462 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005057005.1 PFAM: DNA helicase, UvrD/REP type; KEGG: aca:ACP_0931 ATP-dependent DNA helicase, UvrD/REP family YP_005057006.1 TIGRFAM: DNA repair protein, predicted; KEGG: aca:ACP_0930 hypothetical protein YP_005057007.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005057008.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aca:ACP_0423 transporter, major facilitator family YP_005057009.1 PFAM: Copper chaperone SCO1/SenC; KEGG: aba:Acid345_3047 electron transport protein SCO1/SenC YP_005057010.1 KEGG: aca:ACP_0309 hypothetical protein YP_005057011.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: aca:ACP_0308 efflux ABC transporter, permease/ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057012.1 PFAM: Rv0623-like transcription factor; KEGG: rpc:RPC_1343 Rv0623-like transcription factor YP_005057013.1 PFAM: PilT protein, N-terminal; KEGG: cwo:Cwoe_0313 PilT protein domain protein YP_005057014.1 KEGG: aca:ACP_3000 peptidase, S9A family; PFAM: Peptidase S9A, oligopeptidase, N-terminal beta-propeller; Peptidase S9, prolyl oligopeptidase, catalytic domain YP_005057015.1 KEGG: geo:Geob_0289 putative outer membrane protein YP_005057016.1 PFAM: Protein of unknown function DUF477; KEGG: aca:ACP_3005 hypothetical protein YP_005057017.1 PFAM: LemA; KEGG: aca:ACP_3006 LemA family protein YP_005057018.1 KEGG: aca:ACP_2976 cation transporter, Mg2+ transporter-E (MgtE) family; PFAM: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core; SMART: Magnesium transporter, MgtE intracellular domain; Cystathionine beta-synthase, core YP_005057019.1 KEGG: rce:RC1_4023 hypothetical protein YP_005057020.1 PFAM: Glucose-methanol-choline oxidoreductase, C-terminal; Monooxygenase, FAD-binding; KEGG: rme:Rmet_5013 hypothetical protein YP_005057021.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: rme:Rmet_5014 hypothetical protein YP_005057022.1 PFAM: Natural resistance-associated macrophage protein; KEGG: aba:Acid345_2655 manganese transporter NRAMP YP_005057023.1 PFAM: NUDIX hydrolase domain; KEGG: aca:ACP_2978 hydrolase, NUDIX family YP_005057024.1 PFAM: Haloacid dehalogenase-like hydrolase; KEGG: aca:ACP_2980 hydrolase, haloacid dehalogenase-like family YP_005057025.1 KEGG: ttu:TERTU_0898 glucuronate isomerase; PFAM: Uronate isomerase YP_005057026.1 KEGG: alv:Alvin_1501 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_005057027.1 KEGG: aca:ACP_2681 hypothetical protein YP_005057028.1 TIGRFAM: Carbohydrate kinase, thermoresistant glucokinase; KEGG: aca:ACP_0310 shikimate kinase domain protein; PFAM: Shikimate kinase YP_005057029.1 KEGG: aca:ACP_2680 NAD dependent epimerase/dehydratase family protein; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057030.1 KEGG: aba:Acid345_4061 beta-glucosidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005057031.1 KEGG: aca:ACP_3437 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005057032.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_3347 putative acyltransferase YP_005057033.1 KEGG: afw:Anae109_2416 major facilitator transporter YP_005057034.1 KEGG: aca:ACP_0797 molecular chaperone DnaK; TIGRFAM: Chaperone DnaK; PFAM: Heat shock protein 70 YP_005057035.1 manually curated; KEGG: aca:ACP_0798 hypothetical protein YP_005057036.1 KEGG: xau:Xaut_1719 hypothetical protein YP_005057037.1 KEGG: aca:ACP_0800 putative formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; DNA glycosylase/AP lyase, catalytic domain; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase; SMART: DNA glycosylase/AP lyase, catalytic domain YP_005057038.1 KEGG: tra:Trad_1431 plasmid maintenance system killer; manually curated; PFAM: Plasmid maintenance system killer YP_005057039.1 SMART: Helix-turn-helix type 3; manually curated; KEGG: tra:Trad_1432 plasmid maintenance system antidote protein, XRE family; TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3 YP_005057040.1 KEGG: aca:ACP_0801 chaperone protein, DnaJ family; PFAM: Heat shock protein DnaJ, N-terminal; Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, cysteine-rich domain; SMART: Heat shock protein DnaJ, N-terminal; Zinc finger, CCHC-type YP_005057041.1 KEGG: pph:Ppha_1715 protein of unknown function DUF497; manually curated; PFAM: Protein of unknown function DUF497 YP_005057042.1 KEGG: pph:Ppha_1714 hypothetical protein YP_005057043.1 KEGG: aca:ACP_0804 transcriptional regulator, MerR family; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR YP_005057044.1 PFAM: Glycosyl transferase, family 2; KEGG: aba:Acid345_0724 ceramide glucosyltransferase, putative YP_005057045.1 PFAM: Glycosyl transferase, family 39; KEGG: aba:Acid345_0725 glycosyl transferase family protein YP_005057046.1 PFAM: Glycosyl transferase, family 39; KEGG: aca:ACP_3444 putative dolichyl-phosphate-mannose-protein mannosyltransferase YP_005057047.1 KEGG: aca:ACP_3447 putative exopolyphosphatase; PFAM: Ppx/GppA phosphatase YP_005057048.1 KEGG: aca:ACP_3446 phosphohistidine phosphatase SixA; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1 YP_005057049.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; Transposase, IS116/IS110/IS902; KEGG: ccs:CCNA_03018 transposase YP_005057050.1 KEGG: ote:Oter_0996 methyltransferase type 12 YP_005057051.1 KEGG: sus:Acid_5706 hypothetical protein YP_005057052.1 PFAM: Glycoside hydrolase, family 57, N-terminal; Domain of unknown function DUF1957; KEGG: pab:PAB1857 hypothetical protein YP_005057053.1 KEGG: aca:ACP_0576 hypothetical protein; PFAM: Transport-associated; SMART: Transport-associated and nodulation domain, bacteria YP_005057054.1 KEGG: aca:ACP_1069 hypothetical protein YP_005057055.1 KEGG: aca:ACP_1070 hypothetical protein YP_005057056.1 KEGG: aca:ACP_1647 tRNA-specific 2-thiouridylase MnmA; TIGRFAM: tRNA-specific 2-thiouridylase; PFAM: tRNA-specific 2-thiouridylase YP_005057057.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bph:Bphy_1506 major facilitator transporter YP_005057058.1 KEGG: aba:Acid345_1011 hypothetical protein YP_005057059.1 KEGG: bcs:BCAN_B0532 synaptic vesicle 2-related protein YP_005057060.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: aca:ACP_2180 hydrolase, alpha/beta fold family YP_005057061.1 PFAM: Protein of unknown function DUF72; KEGG: aca:ACP_2179 hypothetical protein YP_005057062.1 KEGG: aca:ACP_2176 hypothetical protein YP_005057063.1 KEGG: cim:CIMG_03208 hypothetical protein YP_005057064.1 KEGG: sus:Acid_6859 TPR repeat-containing protein YP_005057065.1 KEGG: sus:Acid_0945 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_005057066.1 SMART: Peptidase, metallopeptidase; KEGG: aba:Acid345_4249 peptidase M12A, astacin YP_005057067.1 KEGG: aba:Acid345_4248 hypothetical protein YP_005057068.1 KEGG: mtc:MT1497.1 PE_PGRS family protein YP_005057069.1 KEGG: fjo:Fjoh_4175 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; Carbohydrate binding domain, family 6; SMART: Chitinase II YP_005057070.1 PFAM: Peptidase M24, structural domain; KEGG: bbe:BBR47_04370 hypothetical protein YP_005057071.1 KEGG: htu:Htur_2377 zinc finger CHY domain protein YP_005057072.1 TIGRFAM: Methionine sulphoxide reductase B; Twin-arginine translocation pathway, signal sequence; KEGG: slt:Slit_2769 methionine-R-sulfoxide reductase; PFAM: Methionine sulphoxide reductase B YP_005057073.1 PFAM: Cytochrome c assembly protein, transmembrane domain; Redoxin; KEGG: rme:Rmet_1170 cytochrome c biogenesis protein, transmembrane region YP_005057074.1 KEGG: aba:Acid345_2653 putative GAF sensor protein; PFAM: GAF; SMART: GAF YP_005057075.1 PFAM: Cupin 2, conserved barrel; KEGG: msm:MSMEG_3484 cupin domain-containing protein YP_005057076.1 KEGG: cyt:cce_1768 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057077.1 PFAM: RDD; KEGG: sth:STH460 hypothetical protein YP_005057078.1 PFAM: Protein of unknown function DUF95, transmembrane; KEGG: cyn:Cyan7425_2278 protein of unknown function DUF95 transmembrane YP_005057079.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: fal:FRAAL1292 putative epoxide hydrolase YP_005057080.1 KEGG: sus:Acid_6523 peptidase S9 prolyl oligopeptidase YP_005057081.1 PFAM: Domain of unknown function DUF58; KEGG: sth:STH462 hypothetical protein YP_005057082.1 KEGG: sth:STH463 methanol dehydrogenase regulatory protein; PFAM: ATPase, AAA-3; SMART: ATPase, AAA+ type, core YP_005057083.1 KEGG: rrs:RoseRS_1833 hypothetical protein YP_005057084.1 manually curated; KEGG: mxa:MXAN_2477 hypothetical protein YP_005057085.1 KEGG: aca:ACP_2109 hypothetical protein YP_005057086.1 PFAM: Cytochrome c oxidase subunit II C-terminal; KEGG: aba:Acid345_0884 cytochrome c oxidase, subunit II YP_005057087.1 PFAM: Cytochrome c, class I; KEGG: aba:Acid345_0885 cytochrome c, class I YP_005057088.1 PFAM: Polysaccharide export protein; Domain of unknown function DUF1017; Soluble ligand binding domain; KEGG: aba:Acid345_0888 polysaccharide export protein YP_005057089.1 KEGG: aba:Acid345_0833 hypothetical protein YP_005057090.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: aba:Acid345_0889 lipopolysaccharide biosynthesis YP_005057091.1 PFAM: Polysaccharide biosynthesis protein; KEGG: aba:Acid345_0890 polysaccharide biosynthesis protein YP_005057092.1 PFAM: Glycosyl transferase, group 1; KEGG: sli:Slin_6405 glycosyl transferase group 1 YP_005057093.1 KEGG: aba:Acid345_0894 WecB/TagA/CpsF family glycosyl transferase; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; PFAM: Glycosyl transferase WecB/TagA/CpsF YP_005057094.1 PFAM: Glycosyl transferase, family 9; KEGG: wsu:WS1450 ADP-heptose-LPS heptosyltransferase II RfaF YP_005057095.1 PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; KEGG: sus:Acid_6633 HPr(Ser) kinase/phosphatase YP_005057096.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rci:RCIX86 major facilitator superfamily permease YP_005057097.1 PFAM: Major facilitator superfamily MFS-1; KEGG: rci:RCIX86 major facilitator superfamily permease YP_005057098.1 PFAM: Glycerophosphoryl diester phosphodiesterase; HEAT; KEGG: sus:Acid_6993 glycerophosphoryl diester phosphodiesterase YP_005057099.1 KEGG: aba:Acid345_0886 hypothetical protein YP_005057100.1 KEGG: aba:Acid345_4054 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005057101.1 KEGG: aba:Acid345_4055 periplasmic sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005057102.1 KEGG: aba:Acid345_0519 hypothetical protein YP_005057103.1 KEGG: aba:Acid345_0518 hypothetical protein YP_005057104.1 PFAM: Transposase IS200-like; KEGG: aca:ACP_2347 hypothetical protein YP_005057105.1 KEGG: cse:Cseg_1903 FAD-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_005057106.1 KEGG: cse:Cseg_1904 hypothetical protein YP_005057107.1 KEGG: mkm:Mkms_1761 beta-lactamase; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Uncharacterised conserved protein UCP016719; Beta-lactamase-related; Sodium/solute symporter YP_005057108.1 TIGRFAM: N-acetylglucosamine-6-phosphate deacetylase; KEGG: aca:ACP_1119 N-acetylglucosamine-6-phosphate deacetylase; PFAM: Amidohydrolase 1 YP_005057109.1 PFAM: Glycoside hydrolase, family 20, catalytic core; KEGG: aca:ACP_0036 glycosyl hydrolase, family 20, catalytic domain protein YP_005057110.1 KEGG: aca:ACP_3113 outer membrane lipoprotein carrier protein, LolA family; TIGRFAM: Outer membrane lipoprotein carrier protein LolA, Proteobacteria; PFAM: Outer membrane lipoprotein carrier protein LolA YP_005057111.1 KEGG: aca:ACP_3114 hypothetical protein YP_005057112.1 KEGG: aca:ACP_0056 insulinase family protein; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal YP_005057113.1 KEGG: rsc:RCFBP_20126 hypothetical protein YP_005057114.1 TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; PFAM: Radical SAM; KEGG: aca:ACP_0057 radical SAM enzyme, Cfr family; SMART: Elongator protein 3/MiaB/NifB YP_005057115.1 KEGG: aca:ACP_3420 addiction module antitoxin, RelB/DinJ family; TIGRFAM: RelB antitoxin; PFAM: RelB antitoxin YP_005057116.1 KEGG: aca:ACP_0060 hypothetical protein; TIGRFAM: Uncharacterised protein family UPF0052; PFAM: LPPG:FO 2-phospho-L-lactate transferase CofD/UPF0052 YP_005057117.1 PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-3; KEGG: aca:ACP_0061 TPR domain protein YP_005057118.1 KEGG: aca:ACP_0062 hypothetical protein YP_005057119.1 PFAM: Glycosyl transferase, family 9; KEGG: nhl:Nhal_1327 glycosyl transferase family 9 YP_005057120.1 KEGG: aca:ACP_0744 lipopolysaccharide core biosynthesis protein; TIGRFAM: RfaE bifunctional protein, domain I; RfaE bifunctional protein, domain II; Cytidyltransferase-related; PFAM: Carbohydrate/purine kinase; Cytidylyltransferase YP_005057121.1 KEGG: sus:Acid_3935 ATP-dependent carboxylate-amine ligase domain-containing protein YP_005057122.1 PFAM: Cytochrome P450; KEGG: sus:Acid_6622 cytochrome P450-like YP_005057123.1 KEGG: aba:Acid345_2105 hypothetical protein YP_005057124.1 KEGG: dac:Daci_3216 hypothetical protein YP_005057125.1 KEGG: she:Shewmr4_2784 phage transcriptional regulator, AlpA; manually curated; PFAM: Prophage CP4-57 regulatory YP_005057126.1 KEGG: dap:Dacet_0262 DNA binding domain protein, excisionase family YP_005057127.1 KEGG: msv:Mesil_1745 DNA binding domain protein, excisionase family YP_005057128.1 KEGG: sus:Acid_5714 TonB-dependent receptor YP_005057130.1 KEGG: cyh:Cyan8802_3621 protein of unknown function UPF0150 YP_005057131.1 KEGG: bfs:BF0497 hypothetical protein YP_005057132.1 KEGG: cjr:CJE0545 DNA binding domain-containing protein YP_005057133.1 KEGG: aba:Acid345_4251 YD repeat-containing protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: YD repeat YP_005057134.1 KEGG: sus:Acid_4694 hypothetical protein YP_005057135.1 PFAM: Transposase IS200-like; KEGG: aca:ACP_0645 hypothetical protein YP_005057136.1 KEGG: xtr:100495717 ribosomal protein S6 kinase alpha-2-like YP_005057137.1 KEGG: aeh:Mlg_2844 fructose-1,6-bisphosphate aldolase YP_005057138.1 KEGG: lbz:LbrM14_V2.1060 protein kinase YP_005057139.1 PFAM: Transglutaminase-like; KEGG: aca:ACP_0079 hypothetical protein YP_005057140.1 KEGG: aca:ACP_0078 hypothetical protein; manually curated; PFAM: Transglutaminase-like YP_005057141.1 PFAM: Amidohydrolase 2; KEGG: aor:AO090023000252 hypothetical protein YP_005057142.1 KEGG: msl:Msil_1918 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057143.1 KEGG: rle:pRL110137 putative cyclase/dehydrase; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005057144.1 KEGG: bpy:Bphyt_4346 NmrA family protein YP_005057145.1 KEGG: aca:ACP_1914 hypothetical protein YP_005057146.1 KEGG: psp:PSPPH_0962 hypothetical protein YP_005057147.1 KEGG: aca:ACP_2843 arginine--tRNA ligase YP_005057148.1 PFAM: Beta-lactamase-like; KEGG: cse:Cseg_1814 hypothetical protein YP_005057149.1 TIGRFAM: Diacylglycerol/lipid kinase; PFAM: Diacylglycerol kinase, catalytic domain; KEGG: aba:Acid345_4650 hypothetical protein; SMART: Diacylglycerol kinase, catalytic domain YP_005057150.1 KEGG: aca:ACP_2959 leucyl aminopeptidase; HAMAP: Peptidase, M17, probable cytosol aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; Peptidase M17, leucyl aminopeptidase, N-terminal YP_005057151.1 KEGG: aca:ACP_2960 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SsrA-binding protein YP_005057152.1 PFAM: Type II/III secretion system; Cellulosome anchoring protein, cohesin domain; KEGG: aca:ACP_2961 type II/III secretion system protein YP_005057153.1 PFAM: Type II secretion system protein G; KEGG: aca:ACP_2962 putative secretion protein YP_005057154.1 PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; KEGG: aca:ACP_2963 prepilin-type N-terminal cleavage/methylation domain protein YP_005057155.1 PFAM: Peptidase M48; KEGG: aca:ACP_0569 peptidase, M48 family YP_005057156.1 PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase; TIGRFAM: Nitrile oxidoreductase, NADPH-dependent, QueF; HAMAP: Nitrile oxidoreductase, NADPH-dependent, QueF; KEGG: aca:ACP_3035 7-cyano-7-deazaguanine reductase YP_005057157.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aca:ACP_3036 transporter, major facilitator family YP_005057158.1 PFAM: Glycosyl transferase, family 2; KEGG: aca:ACP_3037 glycosyl transferase, group 2 family YP_005057159.1 KEGG: aca:ACP_3039 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type YP_005057160.1 KEGG: sus:Acid_5553 peptidase M56, BlaR1; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057161.1 PFAM: Sulfatase; KEGG: psl:Psta_4203 sulfatase YP_005057162.1 PFAM: Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; Nitrite/sulphite reductase 4Fe-4S domain; KEGG: fal:FRAAL2331 cobalamin biosynthesis protein CobG YP_005057163.1 KEGG: sco:SCO3282 precorrin-8X methylmutase; PFAM: Cobalamin (vitamin B12) biosynthesis CobH/CbiC, precorrin-8X methylmutase, core YP_005057164.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobJ/CibH, precorrin-3B C17-methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CobI/CbiL, precorrin-2 C20-methyltransferase, core; KEGG: sro:Sros_5595 precorrin-3B methylase-like protein; PFAM: Tetrapyrrole methylase YP_005057165.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CbiE, precorrin-6Y methyltransferase, core; Cobalamin (vitamin B12) biosynthesis CbiT, precorrin-6Y methyltransferase-core; KEGG: sen:SACE_5944 precorrin-6Y C(5,15)-methyltransferase (decarboxylating); PFAM: Tetrapyrrole methylase; tRNA (guanine-N-7) methyltransferase YP_005057166.1 PFAM: Cobalamin (vitamin B12) biosynthesis CbiG, core; KEGG: rlt:Rleg2_2126 precorrin-3B C17-methyltransferase protein YP_005057167.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobM/CbiF, precorrin-4 C11-methyltransferase, core; KEGG: oan:Oant_1885 precorrin-4 C11-methyltransferase; PFAM: Tetrapyrrole methylase YP_005057168.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase; KEGG: gbr:Gbro_2478 precorrin-6x reductase; PFAM: Cobalamin (vitamin B12) biosynthesis CobK/CbiJ, precorrin-6x reductase YP_005057169.1 TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobF, precorrin-6A synthase; KEGG: fra:Francci3_2657 precorrin 6A synthase; PFAM: Tetrapyrrole methylase YP_005057170.1 KEGG: aca:ACP_1588 hypothetical protein YP_005057171.1 KEGG: sus:Acid_3740 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein YP_005057172.1 KEGG: aca:ACP_1245 protein MobD YP_005057173.1 KEGG: aca:ACP_2400 hypothetical protein YP_005057174.1 KEGG: sus:Acid_3264 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057175.1 KEGG: gvi:gll1813 hypothetical protein YP_005057176.1 KEGG: aba:Acid345_2105 hypothetical protein YP_005057177.1 KEGG: xtr:100495378 ryanodine receptor 1-like YP_005057178.1 KEGG: aba:Acid345_2105 hypothetical protein YP_005057179.1 PFAM: Integrase, catalytic core, phage; KEGG: sat:SYN_00695 phage integrase family protein YP_005057180.1 KEGG: hel:HELO_4196 hypothetical protein YP_005057182.1 KEGG: plm:Plim_1224 hypothetical protein YP_005057183.1 PFAM: Phage Gp37Gp68; KEGG: nmr:Nmar_1160 Gp37Gp68 family protein YP_005057184.1 KEGG: pwa:Pecwa_1877 flagellar hook-associated protein FlgK YP_005057185.1 PFAM: Phage Gp37Gp68; KEGG: mno:Mnod_3808 Gp37Gp68 family protein YP_005057186.1 KEGG: vap:Vapar_0954 putative histone H1/H5 family protein, HCT subfamily YP_005057187.1 KEGG: cob:COB47_0258 hypothetical protein YP_005057188.1 manually curated; KEGG: afw:Anae109_4222 hypothetical protein YP_005057189.1 manually curated YP_005057190.1 KEGG: mmi:MMAR_1943 hypothetical protein YP_005057191.1 KEGG: hel:HELO_2115 hypothetical protein YP_005057192.1 KEGG: tet:TTHERM_01276420 Dynein heavy chain family protein YP_005057193.1 PFAM: RNA polymerase sigma factor 70, region 4 type 2; KEGG: scl:sce7221 ECF family RNA polymerase sigma factor YP_005057194.1 KEGG: sli:Slin_1460 hypothetical protein YP_005057195.1 manually curated; PFAM: HNH endonuclease; KEGG: bss:BSUW23_09635 putative HNH endonuclease; SMART: HNH nuclease YP_005057196.1 KEGG: cag:Cagg_0300 von Willebrand factor type A YP_005057197.1 KEGG: nde:NIDE2649 hypothetical protein YP_005057198.1 KEGG: pvx:PVX_092160 hypothetical protein YP_005057199.1 PFAM: Protein of unknown function DUF2971; KEGG: gob:Gobs_3495 hypothetical protein YP_005057200.1 KEGG: pol:Bpro_2971 hypothetical protein YP_005057201.1 PFAM: Phage Terminase; KEGG: spq:SPAB_02167 hypothetical protein YP_005057202.1 KEGG: ccb:Clocel_0780 phage portal protein, HK97 family; TIGRFAM: Phage portal protein, HK97; PFAM: Phage portal protein YP_005057203.1 KEGG: glo:Glov_1679 phage prohead protease, HK97 family; TIGRFAM: Peptidase U35, phage prohead HK97; PFAM: Peptidase U35, phage prohead HK97 YP_005057204.1 TIGRFAM: Bacteriophage HK97, major capsid protein; KEGG: ecv:APECO1_1022 putative phage capsid protein YP_005057205.1 PFAM: Bacteriophage QLRG family, putative DNA packaging; KEGG: pla:Plav_0908 phiE125 gp8 hypothetical protein YP_005057206.1 KEGG: dvu:DVU1497 head-tail adaptor, putative; TIGRFAM: Phage head-tail joining protein; PFAM: Phage head-tail joining protein YP_005057207.1 PFAM: Protein of unknown function DUF3168; KEGG: dvm:DvMF_1650 hypothetical protein YP_005057208.1 PFAM: Phage major tail protein TP901-1; KEGG: dvm:DvMF_1649 hypothetical protein YP_005057209.1 KEGG: cbb:CLD_2067 hypothetical protein YP_005057210.1 KEGG: sbc:SbBS512_E0931 phage protein, HK97 GP10 family; TIGRFAM: Phage protein, HK97, gp10; PFAM: Protein of unknown function DUF646, phage head/tail component YP_005057211.1 KEGG: eck:EC55989_0804 minor tail protein precursor H YP_005057212.1 KEGG: aba:Acid345_3159 hypothetical protein YP_005057213.1 KEGG: rce:RC1_0087 hypothetical protein YP_005057214.1 TIGRFAM: Intron endonuclease, group I; PFAM: Excinuclease ABC, C subunit, N-terminal; Intron-encoded nuclease 2; KEGG: pol:Bpro_1923 excinuclease ABC subunit C; SMART: Excinuclease ABC, C subunit, N-terminal; Intron-encoded nuclease 2 YP_005057215.1 KEGG: aba:Acid345_3157 hypothetical protein YP_005057216.1 KEGG: aba:Acid345_3156 hypothetical protein YP_005057217.1 KEGG: xbo:XBJ1_1202 putative lysozyme (lysis protein) (muramidase) (endolysin) (P13); PFAM: Glycoside hydrolase, family 24 YP_005057218.1 KEGG: dmo:Dmoj_GI23691 GI23691 gene product from transcript GI23691-RA YP_005057219.1 KEGG: aca:ACP_0367 hypothetical protein YP_005057220.1 KEGG: tcr:511817.120 hypothetical protein YP_005057221.1 PFAM: Glycosyl transferase, family 2; KEGG: aca:ACP_0845 glycosyl transferase, group 2 family YP_005057222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mlo:mlr7086 hypothetical protein YP_005057223.1 KEGG: aba:Acid345_1089 radical SAM family Fe-S protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005057224.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: aca:ACP_0571 TonB-dependent receptor YP_005057225.1 KEGG: aca:ACP_1614 hypothetical protein YP_005057226.1 KEGG: bav:BAV2687 biodegradative arginine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal; Orn/Lys/Arg decarboxylase, N-terminal YP_005057227.1 PFAM: Uncharacterised protein family, inner membrane CreD; KEGG: hba:Hbal_2258 hypothetical protein YP_005057228.1 KEGG: gem:GM21_3843 flagellar basal body P-ring protein YP_005057229.1 KEGG: pfr:PFREUD_24120 OsmC protein YP_005057230.1 KEGG: ccu:Ccur_10700 signal transduction histidine kinase YP_005057231.1 KEGG: aca:ACP_0721 chaperonin GroEL; TIGRFAM: Chaperonin Cpn60; PFAM: Chaperonin Cpn60/TCP-1 YP_005057232.1 KEGG: aca:ACP_0720 chaperonin, 10 kDa; PFAM: Chaperonin Cpn10; SMART: Chaperonin Cpn10 YP_005057233.1 KEGG: aca:ACP_0535 hypothetical protein YP_005057234.1 KEGG: aca:ACP_0727 oxidoreductase, short chain dehydrogenase/reductase family; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057235.1 KEGG: hne:HNE_2953 cytochrome P450 family protein; PFAM: Cytochrome P450 YP_005057236.1 KEGG: aca:ACP_0726 exopolysaccharide biosynthesis protein YP_005057237.1 KEGG: aca:ACP_0493 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005057238.1 PFAM: Glycosyl transferase, family 2; KEGG: min:Minf_0545 glycosyltransferase YP_005057239.1 KEGG: aca:ACP_0127 putative acetyltransferase YP_005057240.1 PFAM: Glycosyl transferase, group 1; KEGG: bxe:Bxe_A3856 putative transferase YP_005057241.1 PFAM: Glycosyl transferase, group 1; KEGG: aca:ACP_0751 glycosyl transferase, group 1 family YP_005057242.1 PFAM: Polysaccharide export protein; KEGG: aba:Acid345_3311 polysaccharide export protein YP_005057243.1 TIGRFAM: Exopolysaccharide synthesis protein; KEGG: aba:Acid345_0835 protein-tyrosine kinase; PFAM: Cobyrinic acid a,c-diamide synthase; Lipopolysaccharide biosynthesis YP_005057244.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; manually curated; KEGG: aca:ACP_0750 UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase YP_005057245.1 KEGG: aca:ACP_3115 NAD-dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase YP_005057246.1 KEGG: sen:SACE_6222 secreted protein YP_005057247.1 PFAM: Alginate lyase 2; KEGG: afv:AFLA_097310 hypothetical protein YP_005057248.1 KEGG: sjp:SJA_C1-09550 AraC-family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057249.1 PFAM: Condensation domain; KEGG: bam:Bamb_5736 condensation domain-containing protein YP_005057250.1 KEGG: aca:ACP_0354 hypothetical protein YP_005057251.1 PFAM: Dehydrogenase, E1 component; KEGG: sfu:Sfum_2648 pyruvate dehydrogenase (acetyl-transferring) YP_005057252.1 TIGRFAM: 2-oxo-acid dehydrogenase E1 component homodimeric type; KEGG: aca:ACP_0355 pyruvate dehydrogenase subunit E1; PFAM: Transketolase, N-terminal YP_005057253.1 TIGRFAM: Arginine biosynthesis protein ArgJ; KEGG: aca:ACP_0361 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ YP_005057254.1 KEGG: aca:ACP_2763 thiamine biosynthesis protein ThiC; TIGRFAM: Thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC YP_005057255.1 KEGG: xcv:XCV1693 TonB-like protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005057256.1 KEGG: aca:ACP_0923 peptidase, family M28; PFAM: Peptidase M28; Protease-associated domain, PA; Transferrin receptor-like, dimerisation YP_005057257.1 KEGG: aca:ACP_0926 large conductance mechanosensitive channel protein; TIGRFAM: Large-conductance mechanosensitive channel; PFAM: Large-conductance mechanosensitive channel; Uncharacterised protein family UPF0547 YP_005057258.1 PFAM: Molybdopterin biosynthesis MoaE; ThiamineS; KEGG: aca:ACP_0944 molybdopterin converting factor, subunit 2 YP_005057259.1 TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aba:Acid345_2058 von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_005057260.1 PFAM: Like-Sm ribonucleoprotein (LSM) domain; KEGG: aca:ACP_0946 hypothetical protein YP_005057261.1 PFAM: Inositol monophosphatase; KEGG: aca:ACP_0947 inositol monophosphatase family protein YP_005057262.1 PFAM: 4Fe-4S binding domain; KEGG: aca:ACP_0948 iron-sulfur cluster-binding protein YP_005057263.1 KEGG: aca:ACP_0593 DNA repair protein RecO; TIGRFAM: Recombination protein O, RecO; PFAM: DNA replication/recombination mediator RecO, N-terminal; Recombination protein O, RecO YP_005057264.1 PFAM: Barstar (barnase inhibitor); KEGG: mau:Micau_4997 barstar (barnase inhibitor) YP_005057265.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; KEGG: aca:ACP_0592 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit YP_005057266.1 TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; KEGG: aca:ACP_0591 glycyl-tRNA synthetase, beta subunit YP_005057267.1 PFAM: Catalase-related subgroup; KEGG: aca:ACP_1705 catalase YP_005057268.1 KEGG: aca:ACP_0570 hypothetical protein YP_005057269.1 PFAM: Organic solvent tolerance-like, N-terminal; KEGG: aca:ACP_0623 hypothetical protein YP_005057270.1 PFAM: ABC transporter-like; KEGG: aca:ACP_0622 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057271.1 KEGG: aca:ACP_0621 RNA polymerase sigma-54 factor; TIGRFAM: RNA polymerase sigma factor 54; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54 YP_005057272.1 KEGG: aca:ACP_0620 ribosomal subunit interface protein; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein YP_005057273.1 KEGG: aca:ACP_0619 hypothetical protein YP_005057274.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: aca:ACP_0618 efflux ABC transporter, permease/ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057275.1 SMART: Guanylate kinase/L-type calcium channel; TIGRFAM: Guanylate kinase, sub-group; KEGG: aca:ACP_0616 guanylate kinase; PFAM: Guanylate kinase YP_005057276.1 PFAM: RNA polymerase, subunit omega/K/RPABC2; KEGG: aba:Acid345_3777 DNA-directed RNA polymerase, omega subunit YP_005057277.1 KEGG: aca:ACP_0612 uracil-DNA glycosylase, family 4; TIGRFAM: Phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like YP_005057278.1 PFAM: Protein of unknown function DUF2076; KEGG: xau:Xaut_1890 putative periplasmic ligand-binding sensor protein YP_005057279.1 KEGG: aba:Acid345_0459 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; SMART: Peptidase S53, propeptide YP_005057280.1 PFAM: FG-GAP; KEGG: aba:Acid345_0460 integrin-like protein YP_005057281.1 KEGG: sus:Acid_3814 TPR repeat-containing serine/threonin protein kinase; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal YP_005057283.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: swi:Swit_0937 prolyl aminopeptidase YP_005057284.1 PFAM: Sodium:dicarboxylate symporter; KEGG: phe:Phep_1622 sodium:dicarboxylate symporter YP_005057285.1 KEGG: sus:Acid_2405 Cna B domain-containing protein YP_005057286.1 PFAM: Peptidase M14, carboxypeptidase A; KEGG: sus:Acid_1640 peptidase M14, carboxypeptidase A YP_005057288.1 KEGG: adg:Adeg_2096 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR YP_005057289.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; TonB-dependent receptor, plug; KEGG: sus:Acid_4605 Cna B domain-containing protein YP_005057290.1 KEGG: sli:Slin_0636 peptidase S9 prolyl oligopeptidase active site domain protein YP_005057292.1 PFAM: Putative esterase; KEGG: fbc:FB2170_02290 hypothetical protein YP_005057293.1 KEGG: sus:Acid_7242 YVTN beta-propeller repeat-containing protein YP_005057294.1 KEGG: mch:Mchl_0752 methyl-accepting chemotaxis sensory transducer YP_005057295.1 KEGG: hna:Hneap_0788 acriflavin resistance protein YP_005057296.1 PFAM: Serine/threonine-protein kinase-like domain; PEGA; KEGG: sti:Sthe_0833 serine/threonine protein kinase with PASTA sensor(s) YP_005057297.1 TIGRFAM: Rhs element Vgr protein; KEGG: bfr:BF2845 hypothetical protein YP_005057298.1 PFAM: Gp5, C-terminal; KEGG: mdo:100023206 hypothetical protein LOC100023206 YP_005057299.1 KEGG: cgr:CAGL0F02959g hypothetical protein YP_005057300.1 KEGG: hba:Hbal_3209 phosphoribulokinase/uridine kinase YP_005057301.1 KEGG: neu:NE1277 hypothetical protein YP_005057302.1 PFAM: Metallo-dependent phosphatase; KEGG: sus:Acid_0953 metallophosphoesterase YP_005057303.1 KEGG: yli:YALI0B03575g YALI0B03575p YP_005057304.1 KEGG: azo:azo1429 hypothetical protein YP_005057305.1 KEGG: tet:TTHERM_00037650 hypothetical protein YP_005057306.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: fal:FRAAL0856 hypothetical protein YP_005057307.1 PFAM: Forkhead-associated (FHA) domain; KEGG: ssm:Spirs_0096 FHA domain containing protein YP_005057308.1 KEGG: gem:GM21_2439 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_005057309.1 PFAM: Uncharacterised conserved protein UCP028301; KEGG: vvy:VVA0987 hypothetical protein YP_005057310.1 KEGG: dfe:Dfer_3586 hypothetical protein YP_005057311.1 KEGG: dde:Dde_2351 hypothetical protein YP_005057312.1 KEGG: lch:Lcho_3046 hypothetical protein YP_005057313.1 KEGG: xop:PXO_00260 hypothetical protein YP_005057314.1 PFAM: Protein of unknown function DUF876; KEGG: gau:GAU_3867 hypothetical protein YP_005057315.1 KEGG: plm:Plim_2356 protein of unknown function DUF1080; PFAM: Forkhead-associated (FHA) domain; Protein of unknown function DUF1080; SMART: Forkhead-associated (FHA) domain YP_005057316.1 KEGG: cyt:cce_1768 transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057317.1 KEGG: bur:Bcep18194_C7540 beta-galactosidase/beta-glucuronidase family protein; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel YP_005057318.1 KEGG: aca:ACP_0575 glycosyl hydrolase, family 18; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II YP_005057319.1 KEGG: gvi:glr2490 hypothetical protein YP_005057320.1 KEGG: aca:ACP_2217 putative 4-aminobutyrate aminotransferase; PFAM: Aminotransferase class-III YP_005057322.1 KEGG: azc:AZC_4177 putative aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain YP_005057323.1 KEGG: aca:ACP_2333 FAD-binding/oxidase/4Fe-4S binding domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; Cysteine-rich domain YP_005057324.1 KEGG: bpd:BURPS668_A2082 hypothetical protein YP_005057325.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: azc:AZC_4178 transcriptional regulator YP_005057326.1 PFAM: Arginine repressor, C-terminal; Arginine repressor, DNA-binding domain; KEGG: aca:ACP_2996 arginine repressor YP_005057327.1 TIGRFAM: Ornithine aminotransferase; KEGG: aba:Acid345_1822 aminotransferase; PFAM: Aminotransferase class-III; Amidinotransferase YP_005057328.1 PFAM: Cyclodeaminase/cyclohydrolase; KEGG: dra:DR_0324 serine cycle enzyme, putative YP_005057329.1 KEGG: sus:Acid_5211 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type YP_005057330.1 PFAM: Phenylalanine/histidine ammonia-lyase; manually curated; KEGG: aca:ACP_3026 histidine ammonia-lyase; TIGRFAM: Histidine ammonia-lyase YP_005057331.1 TIGRFAM: Urocanase; KEGG: dge:Dgeo_2735 urocanate hydratase; PFAM: Urocanase YP_005057332.1 TIGRFAM: Imidazolonepropionase; KEGG: dge:Dgeo_2731 imidazolonepropionase; PFAM: Amidohydrolase 3 YP_005057333.1 TIGRFAM: Formiminoglutamate deiminase; KEGG: mxa:MXAN_1010 N-formimino-L-glutamate deiminase; PFAM: Amidohydrolase 1 YP_005057334.1 TIGRFAM: Acetylornithine deacetylase (ArgE); KEGG: mxa:MXAN_1012 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation YP_005057335.1 KEGG: aca:ACP_2353 Na+/H+ antiporter; TIGRFAM: Na+/H+ exchanger, YjcE-like, bacteria; PFAM: Cation/H+ exchanger YP_005057336.1 KEGG: ote:Oter_3726 hypothetical protein YP_005057337.1 KEGG: sus:Acid_7770 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 28 YP_005057338.1 KEGG: aba:Acid345_1738 hypothetical protein YP_005057339.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: cai:Caci_3410 4'-phosphopantetheinyl transferase YP_005057340.1 TIGRFAM: Amino acid adenylation; Non-ribosomal peptide synthase; KEGG: rop:ROP_51640 putative non-ribosomal peptide synthetase; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Thioesterase; Phosphopantetheine-binding YP_005057341.1 KEGG: sgr:SGR_452 putative MbtH-like protein; PFAM: MbtH-like protein; SMART: MbtH-like protein YP_005057342.1 KEGG: sus:Acid_6245 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057343.1 PFAM: Protein of unknown function DUF1801; KEGG: aba:Acid345_4585 hypothetical protein YP_005057344.1 PFAM: Creatininase; KEGG: aba:Acid345_1632 creatininase YP_005057345.1 PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: aba:Acid345_3074 transposase IS116/IS110/IS902 YP_005057346.1 KEGG: hoh:Hoch_1301 transcription factor jumonji; PFAM: Transcription factor jumonji; SMART: Transcription factor jumonji/aspartyl beta-hydroxylase YP_005057347.1 KEGG: pan:PODANSg8061 hypothetical protein YP_005057348.1 TIGRFAM: Transcription elongation factor GreB; HAMAP: Transcription elongation factor greA; KEGG: aba:Acid345_4579 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal YP_005057349.1 KEGG: xla:398197 ataxia telangiectasia and Rad3 related YP_005057350.1 KEGG: aca:ACP_1280 oxidoreductase, short chain dehydrogenase/reductase family; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057351.1 KEGG: sli:Slin_3345 amidase; PFAM: Amidase YP_005057352.1 PFAM: Acyltransferase 3; KEGG: fjo:Fjoh_3387 acyltransferase 3 YP_005057353.1 PFAM: Monooxygenase, FAD-binding; KEGG: gdj:Gdia_2837 monooxygenase FAD-binding YP_005057354.1 PFAM: Monooxygenase, FAD-binding; KEGG: mlo:mlr2028 oxygenase YP_005057355.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; Tetracycline transcriptional regulator, TetR, C-terminal; KEGG: gdj:Gdia_2840 transcriptional regulator, TetR family YP_005057356.1 PFAM: DinB; KEGG: psl:Psta_0758 DinB family protein YP_005057357.1 TIGRFAM: YVTN beta-propeller repeat; KEGG: sus:Acid_3983 hypothetical protein YP_005057358.1 PFAM: Peptidase S41; KEGG: sus:Acid_1599 peptidase S41 YP_005057359.1 PFAM: Protein of unknown function DUF1566; KEGG: dat:HRM2_03570 hypothetical protein YP_005057360.1 TIGRFAM: Transcription elongation factor GreB; HAMAP: Transcription elongation factor greA; KEGG: aba:Acid345_4579 GreA/GreB family elongation factor; PFAM: Transcription elongation factor, GreA/GreB, N-terminal; Transcription elongation factor, GreA/GreB, C-terminal YP_005057361.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: rhi:NGR_c22230 putative reductase protein YP_005057362.1 KEGG: msl:Msil_0385 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057363.1 KEGG: sus:Acid_4480 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057364.1 KEGG: lba:Lebu_1439 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain YP_005057365.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005057366.1 TIGRFAM: Peptidase S41A, C-terminal peptidase; PFAM: Peptidase S41; PDZ/DHR/GLGF; KEGG: aba:Acid345_2676 carboxyl-terminal protease; SMART: Peptidase S41; PDZ/DHR/GLGF YP_005057367.1 PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SurA N-terminal; KEGG: aca:ACP_3124 peptidylprolyl cis-trans isomerase SurA, putative YP_005057368.1 KEGG: aca:ACP_3125 OB-fold nucleic acid binding domain protein/HD domain protein; PFAM: Nucleic acid binding, OB-fold, tRNA/helicase-type; Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain YP_005057369.1 KEGG: bmd:BMD_1158 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR YP_005057370.1 KEGG: sus:Acid_6153 TonB-dependent receptor, plug YP_005057371.1 PFAM: TonB-dependent receptor, plug; Two component regulator three Y; Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_1398 Cna protein B-type domain protein YP_005057372.1 KEGG: aca:ACP_0787 putative LacI-family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005057373.1 PFAM: Protein of unknown function DUF1624; KEGG: aca:ACP_3497 hypothetical protein YP_005057374.1 PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; KEGG: sma:SAV_828 rhamnosidase YP_005057375.1 KEGG: sus:Acid_3646 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 39 YP_005057376.1 TIGRFAM: Chorismate synthase; KEGG: aca:ACP_3127 chorismate synthase; PFAM: Chorismate synthase YP_005057377.1 KEGG: aca:ACP_3128 peptide deformylase; TIGRFAM: Formylmethionine deformylase; PFAM: Formylmethionine deformylase YP_005057378.1 TIGRFAM: Methionyl-tRNA formyltransferase; KEGG: aca:ACP_3129 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, N-terminal; Formyl transferase, C-terminal YP_005057379.1 PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; KEGG: aca:ACP_3130 putative ribosomal RNA small subunit methyltransferase B YP_005057380.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_3021 hypothetical protein YP_005057381.1 KEGG: ecb:100146312 similar to GTRGEO22 YP_005057382.1 KEGG: aba:Acid345_4230 PASTA domain-containing protein; PFAM: PASTA; SMART: PASTA YP_005057383.1 KEGG: aca:ACP_3133 cation diffusion facilitator family transporter; TIGRFAM: Cation efflux protein; PFAM: Cation efflux protein YP_005057384.1 TIGRFAM: UbiE/COQ5 methyltransferase; HAMAP: UbiE/COQ5 methyltransferase; KEGG: aca:ACP_3134 menaquinone biosynthesis methyltransferase UbiE; PFAM: UbiE/COQ5 methyltransferase YP_005057385.1 TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; KEGG: aca:ACP_3135 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB YP_005057386.1 KEGG: gem:GM21_0915 integral membrane protein TerC; TIGRFAM: Integral membrane protein TerC, riboswitch-linked; PFAM: Integral membrane protein TerC YP_005057387.1 PFAM: Peptidase M28; KEGG: aba:Acid345_2681 peptidase M28 YP_005057388.1 KEGG: aca:ACP_3143 sec-independent protein translocase TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; PFAM: Sec-independent periplasmic protein translocase YP_005057389.1 PFAM: Bacterial sec-independent translocation protein MttA/Hcf106; KEGG: aca:ACP_3144 transporter, TatB family YP_005057390.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: aca:ACP_3148 hypothetical protein YP_005057391.1 KEGG: aca:ACP_1036 putative lipoprotein YP_005057392.1 KEGG: sro:Sros_3736 hypothetical protein YP_005057393.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: aba:Acid345_4343 DegT/DnrJ/EryC1/StrS aminotransferase YP_005057394.1 KEGG: aca:ACP_1035 Hfq protein; TIGRFAM: Host factor Hfq; PFAM: Like-Sm ribonucleoprotein (LSM) domain YP_005057395.1 KEGG: aca:ACP_1034 putative GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; PFAM: GTP-binding protein, HSR1-related YP_005057396.1 PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: aca:ACP_1033 ATP synthase F0, subunit B YP_005057397.1 PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; KEGG: aca:ACP_1032 ATP synthase F0, B subunit family YP_005057398.1 KEGG: aca:ACP_1031 ATP synthase F1, delta subunit; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; PFAM: ATPase, F1 complex, OSCP/delta subunit YP_005057399.1 KEGG: aca:ACP_1030 F0F1 ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal YP_005057400.1 KEGG: aca:ACP_1029 ATP synthase F1, gamma subunit; TIGRFAM: ATPase, F1 complex, gamma subunit; PFAM: ATPase, F1 complex, gamma subunit YP_005057401.1 TIGRFAM: ATPase, F1 complex, beta subunit; PFAM: ATPase, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; KEGG: aca:ACP_1028 F0F1 ATP synthase subunit beta; SMART: ATPase, AAA+ type, core YP_005057402.1 KEGG: aca:ACP_1027 ATP synthase F1, epsilon subunit; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal YP_005057403.1 PFAM: Pyrrolo-quinoline quinone repeat; KEGG: bge:BC1002_0547 pyrrolo-quinoline quinone YP_005057404.1 PFAM: Abortive infection protein; KEGG: shw:Sputw3181_0944 abortive infection protein YP_005057405.1 KEGG: bja:bll3994 hypothetical protein YP_005057406.1 KEGG: kpe:KPK_2398 quinate dehydrogenase (pyrroloquinoline-quinone) YP_005057407.1 KEGG: rer:RER_14190 hypothetical protein YP_005057408.1 KEGG: sli:Slin_0086 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057409.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: vap:Vapar_3938 transcriptional regulator, TetR family YP_005057410.1 KEGG: pzu:PHZ_c3511 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057411.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: hoh:Hoch_6264 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_005057412.1 PFAM: Amidohydrolase 1; KEGG: aba:Acid345_3491 Pro-Hyp dipeptidase YP_005057413.1 KEGG: sli:Slin_2366 hypothetical protein YP_005057414.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Cyclic nucleotide-binding domain; KEGG: msl:Msil_2331 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: Cyclic nucleotide-binding domain YP_005057415.1 PFAM: Protein of unknown function DUF1569; KEGG: aca:ACP_1400 hypothetical protein YP_005057416.1 TIGRFAM: DNA ligase, ATP-dependent; KEGG: aca:ACP_2652 DNA ligase, ATP-dependent; PFAM: DNA ligase, ATP-dependent, central; DNA ligase, ATP-dependent, N-terminal; DNA ligase, ATP-dependent, C-terminal YP_005057417.1 PFAM: Metallo-dependent phosphatase; KEGG: gdj:Gdia_1878 metallophosphoesterase YP_005057418.1 KEGG: gau:GAU_3452 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057419.1 PFAM: Beta-lactamase-related; KEGG: gau:GAU_3453 beta-lactamase family protein YP_005057420.1 PFAM: DNA methylase N-4/N-6; KEGG: hau:Haur_4064 site-specific DNA-methyltransferase (adenine-specific) YP_005057421.1 KEGG: aca:ACP_2967 3-hydroxyacyl-CoA dehydrogenase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal YP_005057422.1 PFAM: MaoC-like dehydratase; KEGG: hse:Hsero_1120 acyl dehydratase YP_005057423.1 KEGG: aca:ACP_2968 metallo-beta-lactamase family protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005057424.1 KEGG: aca:ACP_2969 hypothetical protein YP_005057425.1 PFAM: Peptidase S54, rhomboid domain; KEGG: aca:ACP_3298 peptidase, S54 (rhomboid) family YP_005057426.1 KEGG: aca:ACP_3299 DNA-binding protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005057427.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: aca:ACP_3303 3-oxoacyl-(acyl-carrier-protein) reductase; SMART: Polyketide synthase/Fatty acid synthase, KR YP_005057428.1 PFAM: Thymidylate synthase ThyX; KEGG: aca:ACP_3306 hypothetical protein YP_005057429.1 KEGG: aca:ACP_1514 hypothetical protein; TIGRFAM: Protein of unknown function DUF165; PFAM: Protein of unknown function DUF165 YP_005057430.1 SMART: ATPase, AAA+ type, core; TIGRFAM: DNA recombination and repair protein RecA; KEGG: aca:ACP_3307 RecA protein; HAMAP: DNA recombination and repair protein RecA; PFAM: DNA recombination and repair protein RecA YP_005057431.1 manually curated; PFAM: Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-1; KEGG: sus:Acid_3814 TPR repeat-containing serine/threonin protein kinase; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat YP_005057432.1 KEGG: aca:ACP_1301 Ig domain protein; TIGRFAM: Gloeobacter/Verrucomicrobia repeat; PFAM: Putative Ig YP_005057433.1 KEGG: aca:ACP_2822 nonpeptidase homolog, peptidase S53 family; PFAM: Peptidase S53, propeptide; SMART: Peptidase S53, propeptide YP_005057434.1 KEGG: tye:THEYE_A0194 transcriptional regulator, putative YP_005057435.1 KEGG: bfs:BF0497 hypothetical protein YP_005057436.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Cyclic nucleotide-binding domain; KEGG: bph:Bphy_4599 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: Cyclic nucleotide-binding domain YP_005057437.1 PFAM: Amino acid permease domain; KEGG: hau:Haur_0002 hypothetical protein YP_005057438.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gbm:Gbem_1244 GNAT family acetyltransferase YP_005057439.1 KEGG: sus:Acid_7795 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005057440.1 KEGG: slt:Slit_0930 hypothetical protein YP_005057442.1 KEGG: swo:Swol_1837 PilT protein-like protein; PFAM: PilT protein, N-terminal; SMART: Nucleotide binding protein, PINc YP_005057443.1 KEGG: gfo:GFO_3200 electron transport protein YP_005057444.1 TIGRFAM: Excinuclease ABC, B subunit; PFAM: Helicase, C-terminal; UvrB/UvrC protein; Restriction endonuclease, type I, R subunit/Type III, Res subunit; KEGG: aca:ACP_2786 excinuclease ABC subunit B; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal YP_005057445.1 KEGG: sus:Acid_7225 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1 YP_005057446.1 PFAM: ABC transporter-like; KEGG: aca:ACP_0362 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057447.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aba:Acid345_4156 N-acetylglutamate synthase YP_005057448.1 TIGRFAM: Argininosuccinate lyase; KEGG: aca:ACP_2991 argininosuccinate lyase; PFAM: Lyase 1, N-terminal YP_005057449.1 TIGRFAM: Argininosuccinate synthase; KEGG: aca:ACP_3096 argininosuccinate synthase; PFAM: Argininosuccinate synthase YP_005057450.1 KEGG: bvu:BVU_2516 hypothetical protein YP_005057451.1 TIGRFAM: Ornithine carbamoyltransferase; KEGG: aca:ACP_2992 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding domain; Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding YP_005057452.1 TIGRFAM: Acetylornithine/succinylornithine aminotransferase; KEGG: aca:ACP_2993 acetylornithine transaminase; PFAM: Aminotransferase class-III YP_005057453.1 TIGRFAM: Acetylglutamate kinase; KEGG: aca:ACP_2994 acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase YP_005057454.1 KEGG: aca:ACP_2995 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase, type 1; SMART: Semialdehyde dehydrogenase, NAD-binding YP_005057455.1 PFAM: Arginine repressor, C-terminal; Arginine repressor, DNA-binding domain; KEGG: aca:ACP_2996 arginine repressor YP_005057456.1 KEGG: aca:ACP_2997 NADPH-dependent glutamate synthetase; PFAM: Glutamate synthase, central-C; Glutamate synthase, central-N; Glutamate synthase, alpha subunit, C-terminal; Glutamine amidotransferase, class-II YP_005057457.1 KEGG: aca:ACP_1006 Cys/Met metabolism PLP-dependent enzyme; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme YP_005057458.1 KEGG: aba:Acid345_2300 hypothetical protein YP_005057459.1 KEGG: aca:ACP_1025 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central domain YP_005057460.1 TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; KEGG: aca:ACP_3308 pantetheine-phosphate adenylyltransferase; PFAM: Cytidylyltransferase YP_005057461.1 PFAM: Methyltransferase type 11; KEGG: sus:Acid_4469 methyltransferase type 11 YP_005057462.1 KEGG: aca:ACP_3309 aspartate aminotransferase; PFAM: Aminotransferase, class I/classII YP_005057463.1 KEGG: aca:ACP_1039 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase, type II, C-terminal YP_005057464.1 KEGG: aca:ACP_1038 phosphoglucomutase/phosphomannomutase family protein; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, C-terminal YP_005057465.1 KEGG: aca:ACP_3310 phosphatase YfbT; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_005057466.1 KEGG: aca:ACP_1759 hypothetical protein YP_005057467.1 TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; KEGG: aca:ACP_2812 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase YP_005057468.1 KEGG: lsl:LSL_1636 branched chain amino acid ABC transporter carrier protein YP_005057469.1 KEGG: aba:Acid345_4232 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; SMART: Peptidase S41; PDZ/DHR/GLGF YP_005057470.1 TIGRFAM: Penicillin-binding protein 1A; KEGG: aca:ACP_3346 penicillin-binding protein, 1A family; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_005057471.1 PFAM: FAD synthetase; Riboflavin kinase; KEGG: aca:ACP_3352 riboflavin biosynthesis protein RibF; SMART: Riboflavin kinase YP_005057472.1 KEGG: aba:Acid345_2630 beta-lactamase-like; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005057473.1 PFAM: Protein of unknown function DUF1844; KEGG: aca:ACP_3354 hypothetical protein YP_005057474.1 KEGG: aca:ACP_3355 folate-binding protein YgfZ; TIGRFAM: Folate-binding, YgfZ; PFAM: Glycine cleavage T-protein, N-terminal; Glycine cleavage T-protein, C-terminal barrel YP_005057475.1 KEGG: aca:ACP_3356 hypothetical protein YP_005057476.1 PFAM: Tetratricopeptide TPR-1; KEGG: aba:Acid345_0780 hypothetical protein YP_005057477.1 KEGG: vsa:VSAL_I2032 pyridoxal-dependent decarboxylase YP_005057478.1 KEGG: aca:ACP_1343 outer membrane efflux protein OprM; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005057479.1 KEGG: sus:Acid_4561 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005057480.1 PFAM: Acriflavin resistance protein; KEGG: gvi:gll0876 AcrB/AcrD/AcrF family multidrug efflux protein YP_005057481.1 KEGG: aba:Acid345_0027 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005057482.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; KEGG: aca:ACP_3456 NADH dehydrogenase I, I subunit; PFAM: 4Fe-4S binding domain YP_005057483.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: sus:Acid_5819 peptidase U62, modulator of DNA gyrase YP_005057484.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: sus:Acid_5820 peptidase U62, modulator of DNA gyrase YP_005057485.1 KEGG: aca:ACP_2760 YbaK/EbsC protein; TIGRFAM: Prolyl-tRNA editing protein, YbaK/EbsC; PFAM: YbaK/aminoacyl-tRNA synthetase-associated domain YP_005057486.1 KEGG: aca:ACP_2761 efflux ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_005057487.1 KEGG: aca:ACP_2762 putative cytochrome c-type biogenesis protein YP_005057488.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: aca:ACP_0499 oxidoreductase, NAD-binding YP_005057489.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_3451 outer membrane efflux protein family YP_005057490.1 PFAM: Secretion protein HlyD; KEGG: aca:ACP_3452 transporter, MFP family YP_005057491.1 KEGG: aca:ACP_3453 DedA family protein; PFAM: SNARE associated Golgi protein; Rhodanese-like; SMART: Rhodanese-like YP_005057492.1 KEGG: aca:ACP_2139 TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005057493.1 PFAM: Protein of unknown function DUF1624; KEGG: aca:ACP_3497 hypothetical protein YP_005057494.1 KEGG: aca:ACP_3455 decarboxylase, UbiD family; TIGRFAM: Menaquinone biosynthesis decarboxylase, SCO4490; Carboxylyase-related; PFAM: Carboxylyase-related YP_005057495.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: sru:SRU_0945 hypothetical protein YP_005057496.1 TIGRFAM: Methylthioadenosine phosphorylase; KEGG: aca:ACP_3357 methylthioadenosine phosphorylase; PFAM: Nucleoside phosphorylase domain YP_005057497.1 PFAM: Carbohydrate/purine kinase; KEGG: aca:ACP_3358 kinase, PfkB family YP_005057498.1 KEGG: aca:ACP_3359 hypothetical protein YP_005057499.1 PFAM: MgtC/SapB transporter; KEGG: aca:ACP_3360 MgtC family protein YP_005057500.1 TIGRFAM: Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; KEGG: aca:ACP_3361 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase YP_005057501.1 PFAM: Peptidase S66, LD-carboxypeptidase A; KEGG: aca:ACP_3362 LD-carboxypeptidase family protein YP_005057502.1 TIGRFAM: Murein peptide ligase; KEGG: aca:ACP_3363 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso- diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal YP_005057503.1 PFAM: Leucine-rich repeat; KEGG: sro:Sros_0991 hypothetical protein YP_005057504.1 KEGG: aca:ACP_3364 1-acyl-sn-glycerol-3-phosphate acyltransferase family protein; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase YP_005057505.1 PFAM: Sporulation-related domain; KEGG: aca:ACP_3366 sporulation/cell division repeat protein YP_005057506.1 KEGG: aca:ACP_0353 hypothetical protein YP_005057507.1 KEGG: aca:ACP_3369 hypothetical protein; PFAM: Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat YP_005057508.1 PFAM: Domain of unknown function DUF820; KEGG: sus:Acid_5455 hypothetical protein YP_005057509.1 TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; KEGG: aca:ACP_0153 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain YP_005057510.1 KEGG: swi:Swit_1054 quinoprotein glucose dehydrogenase; PFAM: PQQ-dependent enzyme, N-terminal; PQQ-dependent enzyme, C-terminal; Pyrrolo-quinoline quinone repeat YP_005057511.1 KEGG: aba:Acid345_3664 hypothetical protein YP_005057512.1 KEGG: aca:ACP_0155 N-acetylmuramic acid-6-phosphate etherase; TIGRFAM: N-acetylmuramic acid 6-phosphate etherase; PFAM: Sugar isomerase (SIS) YP_005057513.1 SMART: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain; TIGRFAM: AICARFT/IMPCHase bienzyme; KEGG: aca:ACP_3297 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme, transformylase domain; Methylglyoxal synthase-like domain YP_005057514.1 KEGG: aba:Acid345_4603 TPR repeat-containing protein YP_005057515.1 TIGRFAM: Deoxyguanosinetriphosphate triphosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: aca:ACP_1099 deoxyguanosinetriphosphate triphosphohydrolase, putative; SMART: Metal-dependent phosphohydrolase, HD domain YP_005057516.1 PFAM: Integrase, catalytic core, phage; KEGG: aca:ACP_3163 phage integrase family protein YP_005057517.1 PFAM: Amidohydrolase 1; KEGG: sus:Acid_3398 amidohydrolase YP_005057518.1 PFAM: Major facilitator superfamily MFS-1; KEGG: met:M446_6784 D-galactonate transporter YP_005057519.1 KEGG: aba:Acid345_1043 hydroxypyruvate reductase; PFAM: MOFRL domain YP_005057520.1 KEGG: aba:Acid345_3750 fis family transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core YP_005057521.1 KEGG: sus:Acid_3814 TPR repeat-containing serine/threonin protein kinase; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat YP_005057522.1 PFAM: Helix-turn-helix, HxlR type; KEGG: rlg:Rleg_3069 transcriptional regulator, HxlR family YP_005057523.1 KEGG: bpt:Bpet3662 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057524.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: ara:Arad_3573 short-chain oxidoreductase protein YP_005057525.1 KEGG: bid:Bind_1834 NADH:flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_005057526.1 KEGG: min:Minf_1323 formate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain YP_005057527.1 PFAM: Protein of unknown function DUF1348; KEGG: pct:PC1_2714 hypothetical protein YP_005057528.1 PFAM: Isochorismatase-like; KEGG: bja:bll4252 putative hydrolase YP_005057529.1 KEGG: pjd:Pjdr2_3149 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057530.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Cyclic nucleotide-binding domain; KEGG: bph:Bphy_4599 cyclic nucleotide-regulated FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: Cyclic nucleotide-binding domain YP_005057531.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mrd:Mrad2831_2101 alpha/beta hydrolase fold YP_005057532.1 KEGG: amr:AM1_6141 3-oxoacyl-(acyl carrier protein) reductase, putative; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057533.1 PFAM: Inositol monophosphatase; KEGG: psa:PST_1593 inositol-1-monophosphatase YP_005057534.1 PFAM: D-ribose pyranase RbsD/L-fucose mutarotase FucU; KEGG: xau:Xaut_2417 RbsD or FucU transport YP_005057535.1 KEGG: rcu:RCOM_1614620 hypothetical protein YP_005057536.1 KEGG: tgo:TGME49_094060 hypothetical protein YP_005057537.1 KEGG: bvi:Bcep1808_6500 cellulose synthase domain-containing protein; PFAM: Cellulose synthase operon C, C-terminal; SMART: Tetratricopeptide repeat YP_005057538.1 KEGG: aca:ACP_0076 endo-1,4-D-glucanase; PFAM: Glycoside hydrolase, family 8 YP_005057539.1 KEGG: aca:ACP_0075 cellulose synthase I; TIGRFAM: Cellulose synthase, subunit A; PFAM: Cellulose synthase BcsB, bacterial; Type IV pilus assembly PilZ; Glycosyl transferase, family 2 YP_005057540.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: aca:ACP_0074 cellulose synthase operon protein YhjQ YP_005057541.1 KEGG: gca:Galf_2568 multi-sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; MHYT; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, phosphotransfer (Hpt) domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005057542.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain; KEGG: sus:Acid_4616 response regulator receiver modulated diguanylate cyclase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver domain YP_005057543.1 TIGRFAM: Diguanylate cyclase, predicted; PFAM: Diguanylate cyclase, predicted; KEGG: smt:Smal_3384 diguanylate cyclase; SMART: Diguanylate cyclase, predicted YP_005057544.1 KEGG: cat:CA2559_10133 hypothetical protein YP_005057545.1 KEGG: nha:Nham_3087 outer membrane autotransporter barrel; TIGRFAM: Domain of unknown function DUF11; Polymorphic membrane protein, Chlamydia; PFAM: Domain of unknown function DUF11 YP_005057546.1 PFAM: Peroxiredoxin, OsmC-like protein; KEGG: sea:SeAg_B3662 hypothetical protein YP_005057547.1 KEGG: pca:Pcar_0280 hypothetical protein YP_005057548.1 TIGRFAM: RNA polymerase sigma-70 ECF-like; RNA polymerase sigma-70; KEGG: sus:Acid_1209 ECF subfamily RNA polymerase sigma-24 factor YP_005057549.1 KEGG: sus:Acid_3444 TPR repeat-containing serine/threonin protein kinase; PFAM: Serine/threonine-protein kinase-like domain YP_005057550.1 KEGG: sus:Acid_7272 beta-lactamase domain-containing protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_005057551.1 KEGG: pph:Ppha_2152 RNA polymerase sigma factor RpoE; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005057552.1 KEGG: bge:BC1002_3890 protein of unknown function UPF0047; TIGRFAM: Uncharacterised protein family UPF0047; PFAM: Uncharacterised protein family UPF0047 YP_005057553.1 KEGG: sus:Acid_3714 hypothetical protein YP_005057554.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_7831 hypothetical protein YP_005057555.1 KEGG: cpi:Cpin_1457 alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; Twin-arginine translocation pathway, signal sequence; PFAM: Glycosyl hydrolase 92 YP_005057556.1 KEGG: bja:bll1305 hypothetical protein YP_005057557.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: reu:Reut_B4058 TetR family transcriptional regulator YP_005057558.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rhi:NGR_c28870 putative glyoxylase YP_005057559.1 KEGG: msl:Msil_2215 3-demethylubiquinone-9 3-methyltransferase YP_005057560.1 KEGG: dsh:Dshi_0759 hypothetical protein YP_005057561.1 PFAM: Mechanosensitive ion channel MscS; KEGG: aca:ACP_1907 transporter, small conductance mechanosensitive ion channel family YP_005057562.1 PFAM: Phosphoesterase; KEGG: bts:Btus_0254 phospholipase C YP_005057563.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: aba:Acid345_4180 multicopper oxidase, type 2 YP_005057564.1 KEGG: sus:Acid_2618 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057565.1 KEGG: bja:blr7676 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain YP_005057566.1 KEGG: sus:Acid_4265 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like YP_005057567.1 PFAM: Oxidoreductase, N-terminal; KEGG: plm:Plim_2857 oxidoreductase domain protein YP_005057568.1 PFAM: Uncharacterised protein family UPF0126; KEGG: bpy:Bphyt_1759 protein of unknown function UPF0126 YP_005057569.1 KEGG: bpd:BURPS668_A0350 hypothetical protein YP_005057570.1 TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; Twin-arginine translocation pathway, signal sequence; KEGG: bja:blr1365 beta-glucosidase; PFAM: Glycoside hydrolase, family 1 YP_005057571.1 KEGG: srm:SRM_01838 two-component sensor histidine kinase YP_005057572.1 PFAM: Domain of unknown function DUF2520; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: gbm:Gbem_3158 hypothetical protein YP_005057573.1 PFAM: Protein of unknown function DUF1234; KEGG: rlg:Rleg_4455 protein of unknown function DUF1234 YP_005057574.1 KEGG: xcv:XCV0642 putative dipeptidyl peptidase IV YP_005057575.1 KEGG: sus:Acid_3119 hypothetical protein YP_005057576.1 PFAM: Domain of unknown function DUF418; KEGG: sli:Slin_3565 protein of unknown function DUF418 YP_005057577.1 KEGG: aca:ACP_3454 hypothetical protein YP_005057578.1 PFAM: Lipase, GDSL; KEGG: plm:Plim_2912 1-alkyl-2-acetylglycerophosphocholine esterase YP_005057579.1 KEGG: aba:Acid345_0514 alpha-1,2-mannosidase, putative; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005057580.1 KEGG: tps:THAPSDRAFT_11093 hypothetical protein YP_005057581.1 KEGG: cai:Caci_4337 coagulation factor 5/8 type domain protein; PFAM: Malectin; Ricin B lectin; SMART: Ricin B lectin; Parallel beta-helix repeat YP_005057582.1 KEGG: ote:Oter_4325 chondroitin AC lyase; PFAM: Polysaccharide lyase family 8, central domain; Polysaccharide lyase family 8, C-terminal; Polysaccharide lyase 8, N-terminal alpha-helical YP_005057583.1 PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel; KEGG: bth:BT_1768 beta-galactosidase YP_005057584.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: aba:Acid345_0913 hypothetical protein YP_005057585.1 KEGG: sus:Acid_3126 hypothetical protein YP_005057586.1 KEGG: aca:ACP_0787 putative LacI-family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005057587.1 KEGG: sus:Acid_3714 hypothetical protein YP_005057588.1 KEGG: tfu:Tfu_2771 putative dehydrogenase YP_005057589.1 PFAM: Protein of unknown function DUF2470; Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; KEGG: sus:Acid_5960 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_005057590.1 KEGG: aba:Acid345_2907 YVTN beta-propeller repeat-containing protein; TIGRFAM: YVTN beta-propeller repeat; PFAM: Lactonase, 7-bladed beta propeller YP_005057591.1 KEGG: aba:Acid345_2907 YVTN beta-propeller repeat-containing protein YP_005057592.1 KEGG: aca:ACP_1759 hypothetical protein YP_005057593.1 KEGG: aba:Acid345_1688 hypothetical protein YP_005057594.1 KEGG: aba:Acid345_2908 putative secreted glycosyl hydrolase YP_005057595.1 KEGG: aba:Acid345_2735 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b YP_005057596.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: sus:Acid_3125 redoxin domain-containing protein YP_005057597.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: sus:Acid_2048 xylose isomerase domain-containing protein YP_005057598.1 PFAM: ROK; HTH transcriptional regulator, MarR; KEGG: sth:STH2753 transcriptional repressor YP_005057599.1 PFAM: Sugar isomerase (SIS); KEGG: cyn:Cyan7425_4894 sugar isomerase (SIS) YP_005057600.1 manually curated; TIGRFAM: Sugar/inositol transporter; KEGG: htu:Htur_4102 sugar transporter; PFAM: General substrate transporter YP_005057601.1 KEGG: mau:Micau_1964 ROK family protein; PFAM: ROK YP_005057602.1 KEGG: bch:Bcen2424_3270 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase; PFAM: Fumarylacetoacetase, C-terminal-like YP_005057603.1 PFAM: Amino acid permease domain; KEGG: acr:Acry_0648 amino acid permease-associated region YP_005057604.1 PFAM: Amidohydrolase 1; KEGG: vap:Vapar_6063 amidohydrolase YP_005057605.1 KEGG: fjo:Fjoh_2131 cystathionine gamma-synthase YP_005057606.1 KEGG: aca:ACP_0032 transporter, gluconate:H+ symporter (GntP) family; TIGRFAM: Gluconate transporter; PFAM: Gluconate transporter YP_005057607.1 PFAM: Endoribonuclease L-PSP; KEGG: cti:RALTA_B1119 conserved hypothetical protein, endoribonuclease L-PSP domain YP_005057608.1 KEGG: aca:ACP_0034 N-acyl-D-aspartate deacylase; PFAM: Amidohydrolase 3; D-aminoacylase, C-terminal YP_005057609.1 PFAM: Alanine racemase, N-terminal; KEGG: aca:ACP_0035 hypothetical protein YP_005057610.1 KEGG: xcb:XC_1120 xylanase YP_005057611.1 PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 39; KEGG: aba:Acid345_0427 cellulase precursor YP_005057612.1 KEGG: aca:ACP_1262 putative transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005057613.1 PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_2136 TonB-dependent receptor YP_005057614.1 PFAM: Molybdenum cofactor sulfurase, C-terminal; KEGG: cyn:Cyan7425_3596 MOSC domain containing protein YP_005057615.1 KEGG: aca:ACP_2669 hypothetical protein YP_005057616.1 KEGG: sus:Acid_2871 sulfatase; PFAM: Sulfatase YP_005057617.1 PFAM: Cupin 2, conserved barrel; KEGG: gdj:Gdia_2532 cupin 2 conserved barrel domain protein YP_005057618.1 KEGG: bgl:bglu_1g30980 hypothetical protein; PFAM: CHRD; SMART: CHRD YP_005057619.1 KEGG: sus:Acid_5869 TonB-dependent receptor, plug YP_005057620.1 KEGG: msl:Msil_3129 conserved hypothetical rhodanese sulfurtransferase protein YP_005057621.1 PFAM: Protein of unknown function DUF1501; KEGG: psl:Psta_0319 protein of unknown function DUF1501 YP_005057622.1 PFAM: Domain of unknown function DUF1549; Domain of unknown function DUF1553; Cytochrome C, Planctomycete; KEGG: psl:Psta_0318 protein of unknown function DUF1549 YP_005057623.1 PFAM: BioY protein; KEGG: ara:Arad_1269 hypothetical protein YP_005057624.1 PFAM: Protein of unknown function DUF1284; KEGG: sno:Snov_4438 protein of unknown function DUF1284 YP_005057625.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aba:Acid345_1945 LysR family transcriptional regulator YP_005057626.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_1489 hypothetical protein YP_005057627.1 KEGG: sus:Acid_0861 beta-lactamase domain-containing protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005057628.1 PFAM: Cytochrome C, Planctomycete; KEGG: sus:Acid_0858 hypothetical protein YP_005057629.1 PFAM: Cytochrome c, class I; KEGG: aba:Acid345_0885 cytochrome c, class I YP_005057630.1 PFAM: Protein of unknown function DUF1501; KEGG: sus:Acid_0859 hypothetical protein YP_005057631.1 PFAM: Domain of unknown function DUF1549; Cytochrome C, Planctomycete; Domain of unknown function DUF1553; KEGG: sus:Acid_0858 hypothetical protein YP_005057632.1 PFAM: ABC transporter-like; KEGG: sus:Acid_0862 ABC transporter related protein; SMART: ATPase, AAA+ type, core YP_005057633.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: sus:Acid_0863 binding-protein-dependent transport systems inner membrane component YP_005057634.1 TIGRFAM: ABC transporter, urea utilisation-associated, substrate-binding protein; KEGG: sus:Acid_0864 ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic components YP_005057635.1 PFAM: Glutathione peroxidase; KEGG: sus:Acid_7250 glutathione peroxidase YP_005057636.1 KEGG: aca:ACP_1489 hypothetical protein YP_005057638.1 KEGG: sus:Acid_0856 hypothetical protein YP_005057639.1 KEGG: sus:Acid_0868 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989 YP_005057640.1 KEGG: sus:Acid_0867 hypothetical protein; TIGRFAM: Urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989 YP_005057641.1 SMART: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Allophanate hydrolase subunit 1; TIGRFAM: Urea carboxylase; Allophanate hydrolase subunit 2; KEGG: sus:Acid_0866 UreA amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Biotin carboxylase, C-terminal; Carbamoyl-phosphate synthase, large subunit, N-terminal; Biotin/lipoyl attachment; Allophanate hydrolase subunit 1; Carbamoyl-phosphate synthetase, large subunit, ATP-binding YP_005057642.1 TIGRFAM: Allophanate hydrolase; KEGG: sus:Acid_0865 allophanate hydrolase; PFAM: Amidase YP_005057643.1 KEGG: rcu:RCOM_0482760 lyase, putative YP_005057644.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0561 hypothetical protein YP_005057645.1 KEGG: sus:Acid_4054 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel YP_005057646.1 PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; KEGG: amd:AMED_7827 beta-galactosidase YP_005057647.1 KEGG: scl:sce8810 short chain dehydrogenase/reductase family oxidoreductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005057648.1 KEGG: aca:ACP_0550 lipase/acylhydrolase domain protein YP_005057649.1 KEGG: aca:ACP_0553 hypothetical protein YP_005057650.1 PFAM: Glycosyl hydrolase, family 88; Lipase, GDSL; KEGG: aca:ACP_0551 glycosyl hydrolase family 88 protein YP_005057651.1 KEGG: eum:ECUMN_2962 hypothetical protein YP_005057652.1 KEGG: chy:CHY_2509 hypothetical protein YP_005057653.1 KEGG: rxy:Rxyl_2269 hypothetical protein YP_005057654.1 KEGG: rer:RER_18380 non-ribosomal peptide synthetase YP_005057655.1 KEGG: sbi:SORBI_01g003850 hypothetical protein YP_005057656.1 KEGG: sco:SCP1.182 hypothetical protein; TIGRFAM: Conserved hypothetical protein CHP02391; PFAM: Conserved hypothetical protein CHP02391 YP_005057657.1 KEGG: sus:Acid_5553 peptidase M56, BlaR1; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057658.1 KEGG: sat:SYN_02406 hypothetical protein YP_005057659.1 KEGG: sma:SAV_1077 melibiase YP_005057660.1 PFAM: Amidase; KEGG: bgf:BC1003_0585 amidase YP_005057661.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bja:blr7984 transcriptional regulatory protein YP_005057662.1 KEGG: aca:ACP_0192 NAD-dependent epimerase/dehydratase family protein YP_005057663.1 KEGG: aca:ACP_0191 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057664.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bxe:Bxe_A4300 TetR family transcriptional regulator YP_005057665.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: mab:MAB_0717 dehydrogenase/reductase YP_005057666.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: cmi:CMM_1523 putative acetyltransferase YP_005057667.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: ank:AnaeK_3623 bifunctional deaminase-reductase domain protein YP_005057668.1 PFAM: YCII-related; KEGG: aba:Acid345_3072 DGPFAETKE domain-containing protein YP_005057669.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: ote:Oter_2130 alpha/beta hydrolase fold YP_005057670.1 PFAM: Cupin 2, conserved barrel; KEGG: bmd:BMD_1086 cupin domain-containing protein YP_005057671.1 KEGG: sus:Acid_4055 hypothetical protein YP_005057672.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0561 hypothetical protein YP_005057673.1 KEGG: bvu:BVU_0177 glycoside hydrolase family protein YP_005057674.1 SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; KEGG: cyt:cce_1186 two-component hybrid sensor and regulator YP_005057675.1 PFAM: Glycoside hydrolase, family 28; KEGG: ote:Oter_4285 glycoside hydrolase family protein YP_005057676.1 KEGG: ote:Oter_4269 hypothetical protein YP_005057677.1 KEGG: sus:Acid_4055 hypothetical protein YP_005057678.1 PFAM: Glycoside hydrolase, family 28; KEGG: aca:ACP_0554 glycosyl hydrolase, family 28 YP_005057679.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0561 hypothetical protein YP_005057680.1 PFAM: Bacterial alpha-L-rhamnosidase; Bacterial alpha-L-rhamnosidase N-terminal; KEGG: kfl:Kfla_2628 alpha-L-rhamnosidase YP_005057681.1 KEGG: cja:CJA_0384 pectate lyase, putative, pel10C; TIGRFAM: Pectic acid lyase; PFAM: Pectic acid lyase YP_005057682.1 KEGG: gym:GYMC10_0464 hypothetical protein YP_005057683.1 PFAM: Amidohydrolase 1; KEGG: amd:AMED_8462 amidohydrolase YP_005057684.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_5667 TonB-dependent receptor, plug YP_005057685.1 KEGG: aca:ACP_1286 hypothetical protein YP_005057686.1 PFAM: Endoribonuclease L-PSP; KEGG: bgf:BC1003_5617 endoribonuclease L-PSP YP_005057687.1 KEGG: mpo:Mpop_3318 threonine aldolase; PFAM: Aromatic amino acid beta-eliminating lyase/threonine aldolase YP_005057688.1 KEGG: pwa:Pecwa_0574 6-phosphogluconate dehydrogenase NAD-binding protein YP_005057689.1 PFAM: Superoxide dismutase, copper/zinc binding; KEGG: gox:GOX1879 superoxide dismutase [Cu-Zn] YP_005057690.1 PFAM: Protein of unknown function DUF477; KEGG: aba:Acid345_1517 hypothetical protein YP_005057691.1 KEGG: cak:Caul_0712 putative secreted protein YP_005057692.1 KEGG: sus:Acid_4323 peptidase M56, BlaR1 YP_005057693.1 KEGG: aca:ACP_0005 hypothetical protein YP_005057694.1 KEGG: aca:ACP_0004 hypothetical protein YP_005057695.1 KEGG: rsl:RPSI07_mp1702 putative transcriptional regulator, XRE family YP_005057696.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_6733 short-chain dehydrogenase/reductase SDR YP_005057697.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aba:Acid345_3089 TetR family transcriptional regulator YP_005057698.1 KEGG: rlg:Rleg_6351 hypothetical protein YP_005057699.1 KEGG: bpy:Bphyt_4636 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005057700.1 KEGG: msl:Msil_3310 Dyp-type peroxidase family; TIGRFAM: Dyp-type peroxidase; PFAM: Dyp-type peroxidase YP_005057701.1 PFAM: Maritimacin/linocin-M18 bacteriocin protein; KEGG: msl:Msil_3309 Linocin_M18 bacteriocin protein YP_005057702.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: aca:ACP_2430 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3 YP_005057703.1 PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: mxa:MXAN_5937 alkylated DNA repair protein AlkB YP_005057704.1 PFAM: Protein of unknown function DUF2086; KEGG: bja:blr2962 hypothetical protein YP_005057705.1 PFAM: Protein of unknown function DUF1772; KEGG: fre:Franean1_1292 hypothetical protein YP_005057706.1 SMART: Elongator protein 3/MiaB/NifB; Biotin/thiamin synthesis-associated protein; TIGRFAM: Biotin synthase; KEGG: scl:sce4247 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM YP_005057707.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_3219 hypothetical protein YP_005057708.1 KEGG: aca:ACP_3525 PepSY-associated TM helix domain protein YP_005057709.1 PFAM: Cation efflux protein; KEGG: aca:ACP_1950 hypothetical protein YP_005057710.1 PFAM: Protein of unknown function DUF156; KEGG: aca:ACP_0307 hypothetical protein YP_005057711.1 PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_0428 hypothetical protein YP_005057712.1 PFAM: MgtC/SapB transporter; KEGG: tra:Trad_0851 MgtC/SapB transporter YP_005057713.1 TIGRFAM: Adenosine deaminase; KEGG: rpc:RPC_4230 adenosine deaminase; PFAM: Adenosine/AMP deaminase YP_005057714.1 PFAM: Nitroreductase-like; KEGG: aca:ACP_0442 nitroreductase family protein YP_005057715.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sno:Snov_2937 alpha/beta hydrolase fold protein YP_005057716.1 PFAM: Drug/metabolite transporter; KEGG: cth:Cthe_1494 hypothetical protein YP_005057717.1 KEGG: aba:Acid345_2190 hypothetical protein YP_005057718.1 PFAM: Transcriptional coactivator/pterin dehydratase; KEGG: chl:Chy400_3417 transcriptional coactivator/pterin dehydratase YP_005057719.1 TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; KEGG: aba:Acid345_1714 glucosamine-1-phosphate N-acetyltransferase / UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase YP_005057720.1 TIGRFAM: DNA helicase, ATP-dependent, RecQ type; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain; KEGG: aca:ACP_0647 ATP-dependent DNA helicase RecQ; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase/RNase D C-terminal, HRDC domain YP_005057721.1 KEGG: mno:Mnod_4965 hypothetical protein YP_005057722.1 KEGG: rpi:Rpic_3374 aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead YP_005057723.1 KEGG: sli:Slin_2370 molybdopterin dehydrogenase FAD-binding protein; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal YP_005057724.1 KEGG: eck:EC55989_0291 putative xanthine dehydrogenase iron-sulfur-binding subunit; PFAM: [2Fe-2S]-binding; Ferredoxin YP_005057725.1 PFAM: Peptidase S10, serine carboxypeptidase; KEGG: aca:ACP_0741 serine carboxypeptidase family protein YP_005057726.1 KEGG: ppl:POSPLDRAFT_114400 candidate G-protein alpha subunit YP_005057727.1 KEGG: sli:Slin_4386 hypothetical protein YP_005057728.1 KEGG: ctl:CTLon_0302 hypothetical protein YP_005057729.1 KEGG: smd:Smed_6429 monophenol monooxygenase; PFAM: Tyrosinase YP_005057730.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; KEGG: bxe:Bxe_C1337 putative multicopper oxidase YP_005057731.1 KEGG: nha:Nham_1020 hypothetical protein YP_005057732.1 PFAM: ThiJ/PfpI; KEGG: nha:Nham_2960 ThiJ/PfpI YP_005057733.1 KEGG: aca:ACP_0641 hypothetical protein YP_005057734.1 KEGG: aca:ACP_0420 3,4-dihydroxy-2-butanone 4-phosphate synthase/putative GTP cyclohydrolase II; TIGRFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; PFAM: 3,4-dihydroxy-2-butanone 4-phosphate synthase, RibB; GTP cyclohydrolase II, RibA YP_005057735.1 KEGG: aca:ACP_0419 HAD-superfamily hydrolase, subfamily IA, variant 3; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_005057736.1 KEGG: aca:ACP_0421 aminotransferase, classes I and II; PFAM: Aminotransferase, class I/classII YP_005057737.1 KEGG: rme:Rmet_3458 hypothetical protein YP_005057738.1 KEGG: aca:ACP_0422 metallo-beta-lactamase family protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005057739.1 KEGG: aba:Acid345_1902 protein translocase subunit SecG; TIGRFAM: Preprotein translocase SecG subunit; PFAM: Preprotein translocase SecG subunit YP_005057740.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: ddr:Deide_3p01670 putative prolyl aminopeptidase YP_005057741.1 KEGG: bgf:BC1003_4193 hypothetical protein YP_005057742.1 KEGG: bur:Bcep18194_C7718 hypothetical protein YP_005057743.1 KEGG: bss:BSUW23_10790 putative GTP-binding protein YP_005057744.1 KEGG: aca:ACP_0453 hydrolase, haloacid dehalogenase family; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_005057745.1 KEGG: rpa:RPA4065 hypothetical protein YP_005057746.1 KEGG: sii:LD85_2613 glycoside hydrolase, family 3 domain protein; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal YP_005057747.1 PFAM: Glycosyl transferase, group 1; KEGG: lxx:Lxx08630 glucosyltransferase YP_005057748.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: aca:ACP_0159 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: Enolpyruvate transferase domain YP_005057749.1 TIGRFAM: Hypoxanthine phosphoribosyl transferase; KEGG: aba:Acid345_3058 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase YP_005057750.1 PFAM: Prolipoprotein diacylglyceryl transferase; KEGG: aca:ACP_0162 putative prolipoprotein diacylglyceryl transferase YP_005057751.1 KEGG: sus:Acid_4216 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057752.1 PFAM: Protein of unknown function DUF45; KEGG: aca:ACP_0163 hypothetical protein YP_005057753.1 KEGG: sus:Acid_3264 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057754.1 KEGG: aca:ACP_0165 TPR domain protein YP_005057755.1 KEGG: aca:ACP_0166 excinuclease ABC, A subunit; TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like YP_005057756.1 TIGRFAM: Peptidase A8, signal peptidase II; KEGG: aca:ACP_0490 signal peptidase II; PFAM: Peptidase A8, signal peptidase II YP_005057757.1 TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; KEGG: aca:ACP_0489 isoleucine--tRNA ligase YP_005057758.1 KEGG: aca:ACP_0488 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005057759.1 PFAM: Adenylate cyclase; KEGG: aca:ACP_2984 adenylate cyclase YP_005057760.1 KEGG: aca:ACP_2985 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; PFAM: Sua5/YciO/YrdC, N-terminal; SUA5 YP_005057761.1 KEGG: aca:ACP_2986 Hfq domain protein YP_005057762.1 KEGG: aca:ACP_2987 DNA polymerase III, delta prime subunit YP_005057763.1 KEGG: aca:ACP_2988 cytochrome P450 family protein; PFAM: Cytochrome P450 YP_005057764.1 PFAM: Thymidylate kinase; TIGRFAM: Thymidylate kinase; HAMAP: Thymidylate kinase; KEGG: aca:ACP_2989 dTMP kinase YP_005057765.1 KEGG: pop:POPTR_597059 hypothetical protein YP_005057766.1 KEGG: aca:ACP_0515 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region; Bacterial transferase hexapeptide repeat YP_005057767.1 KEGG: aba:Acid345_1936 hypothetical protein YP_005057768.1 PFAM: Poly A polymerase, head domain; KEGG: aca:ACP_0513 tRNA nucleotidyltransferase/poly(A) polymerase family protein YP_005057769.1 KEGG: bja:blr7102 hypothetical protein YP_005057770.1 KEGG: aca:ACP_0180 sigma-54 dependent DNA-binding response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core YP_005057771.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold; KEGG: aca:ACP_0181 sensor histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAS YP_005057772.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: aba:Acid345_0627 alpha/beta hydrolase YP_005057773.1 KEGG: aca:ACP_0264 hypothetical protein YP_005057774.1 PFAM: Peptidase M20; Peptidase M20, dimerisation; KEGG: aca:ACP_0266 acetylornithine deacetylase YP_005057775.1 KEGG: gca:Galf_1817 hypothetical protein YP_005057776.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: aca:ACP_3484 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal YP_005057777.1 KEGG: sus:Acid_5246 hypothetical protein YP_005057778.1 KEGG: sus:Acid_1324 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057779.1 PFAM: Uncharacterised protein family YphA; KEGG: cyj:Cyan7822_4082 DoxX family protein YP_005057780.1 TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; KEGG: aca:ACP_2464 acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit YP_005057781.1 PFAM: Abortive infection protein; KEGG: aca:ACP_2463 protease, CAAX amino terminal family YP_005057782.1 KEGG: sal:Sala_1982 gamma-glutamyltransferase; PFAM: Gamma-glutamyltranspeptidase YP_005057783.1 KEGG: adg:Adeg_2096 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR YP_005057784.1 KEGG: sus:Acid_3356 Cna B domain-containing protein YP_005057785.1 KEGG: sma:SAV_1077 melibiase; PFAM: Glycoside hydrolase, family 31 YP_005057786.1 KEGG: amd:AMED_4671 signal peptide protein YP_005057787.1 KEGG: aca:ACP_3485 hypothetical protein YP_005057788.1 PFAM: Amidinotransferase; KEGG: cyh:Cyan8802_3360 LOR/SDH bifunctional protein conserved domain protein YP_005057789.1 KEGG: aca:ACP_0904 rare lipoprotein A family protein; TIGRFAM: Rare lipoprotein A, bacterial; PFAM: Barwin-related endoglucanase YP_005057790.1 TIGRFAM: Phosphomethylpyrimidine kinase type-2; KEGG: aca:ACP_0903 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_005057791.1 PFAM: Protein of unknown function DUF1800; KEGG: aba:Acid345_2867 hypothetical protein YP_005057792.1 KEGG: tbd:Tbd_2127 thiamine-biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; PFAM: ThiamineS YP_005057793.1 PFAM: Glycosyl transferase, group 1; KEGG: aca:ACP_0466 glycosyl transferase, group 1 family YP_005057794.1 KEGG: cai:Caci_3492 coagulation factor 5/8 type domain protein; PFAM: Carbohydrate binding domain, family 6; Ricin B lectin; Fibronectin, type III; SMART: Ricin B lectin; Fibronectin, type III YP_005057795.1 KEGG: aba:Acid345_2449 hypothetical protein YP_005057796.1 PFAM: Uncharacterised protein family UPF0403; KEGG: dfe:Dfer_5785 protein of unknown function DUF1094 YP_005057797.1 KEGG: sus:Acid_2618 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057798.1 KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005057800.1 PFAM: Exosortase EpsH-related; KEGG: dvm:DvMF_0672 eight transmembrane protein EpsH YP_005057801.1 KEGG: amd:AMED_8380 putative chitinase; PFAM: Ricin B lectin; Glycoside hydrolase, family 18, catalytic domain; SMART: Ricin B lectin YP_005057802.1 KEGG: aca:ACP_3122 ISAca1, transposase YP_005057803.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; GAF; PAS fold-3; KEGG: smd:Smed_5522 PAS/PAC sensor signal transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS; GAF YP_005057804.1 KEGG: ara:Arad_8257 two-component nodulation response regulator protein; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005057805.1 KEGG: aba:Acid345_3728 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005057806.1 KEGG: aca:ACP_2496 hypothetical protein YP_005057807.1 KEGG: eat:EAT1b_1942 flavodoxin-like protein YP_005057808.1 PFAM: Protein of unknown function DUF2278; KEGG: scl:sce1560 hypothetical protein YP_005057809.1 KEGG: sdl:Sdel_1826 chemotaxis sensory transducer YP_005057810.1 PFAM: Glycoside hydrolase, family 18, catalytic domain; KEGG: bbe:BBR47_02930 putative chitinase D precursor; SMART: Carbohydrate-binding domain, family 5/12 YP_005057811.1 KEGG: sus:Acid_3443 glycyl aminopeptidase; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF YP_005057812.1 TIGRFAM: YVTN beta-propeller repeat; KEGG: amd:AMED_1395 YVTN beta-propeller repeat-containing protein YP_005057813.1 KEGG: pfo:Pfl01_2105 hypothetical protein YP_005057814.1 KEGG: plu:plu1121 hypothetical protein YP_005057815.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: cyn:Cyan7425_4650 transcriptional regulator, LysR family YP_005057816.1 KEGG: rop:ROP_03260 putative decarboxylase; PFAM: Cupin 1; SMART: Cupin 1 YP_005057817.1 KEGG: sus:Acid_4736 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat YP_005057818.1 KEGG: sus:Acid_3425 hypothetical protein YP_005057819.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aba:Acid345_2575 intradiol ring-cleavage dioxygenase YP_005057820.1 KEGG: uma:UM05948.1 hypothetical protein YP_005057822.1 KEGG: bid:Bind_0754 hypothetical protein YP_005057823.1 KEGG: cyj:Cyan7822_3021 tetratricopeptide repeat-containing protein; PFAM: Tetratricopeptide TPR-1; SMART: Tetratricopeptide repeat YP_005057824.1 KEGG: bpr:GBP346_A3175 hypothetical protein YP_005057825.1 KEGG: pmn:PMN2A_0408 hypothetical protein YP_005057826.1 KEGG: aba:Acid345_4466 hypothetical protein YP_005057827.1 KEGG: aca:ACP_2957 beta-glucosidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005057828.1 KEGG: app:CAP2UW1_0425 hypothetical protein YP_005057829.1 KEGG: phu:Phum_PHUM579690 heavy-chain filboin, putative YP_005057830.1 PFAM: Oxidoreductase, N-terminal; KEGG: sli:Slin_1698 oxidoreductase domain protein YP_005057831.1 KEGG: fjo:Fjoh_3124 putative alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005057832.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_1398 Cna protein B-type domain protein YP_005057833.1 KEGG: aca:ACP_1288 hypothetical protein YP_005057834.1 KEGG: aca:ACP_1286 hypothetical protein YP_005057835.1 KEGG: sus:Acid_0697 amidohydrolase 2; manually curated; PFAM: Amidohydrolase 2 YP_005057836.1 KEGG: dfe:Dfer_5434 beta-Ig-H3/fasciclin; PFAM: FAS1 domain; SMART: FAS1 domain YP_005057837.1 KEGG: bpy:Bphyt_1051 hypothetical protein YP_005057838.1 KEGG: aca:ACP_2800 hypothetical protein YP_005057839.1 KEGG: aba:Acid345_0545 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005057840.1 PFAM: Anti-sigma K factor RskA; KEGG: aba:Acid345_0544 hypothetical protein YP_005057841.1 PFAM: Domain of unknown function DUF151; KEGG: sus:Acid_6705 hypothetical protein YP_005057842.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; KEGG: aca:ACP_0463 tRNA-i(6)A37 thiotransferase enzyme MiaB; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; PFAM: Methylthiotransferase, N-terminal; Radical SAM YP_005057843.1 PFAM: Methyltransferase type 12; KEGG: aba:Acid345_1976 methyltransferase type 12 YP_005057844.1 KEGG: aba:Acid345_1977 metallophosphoesterase; PFAM: Metallo-dependent phosphatase YP_005057845.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: sna:Snas_6199 alpha/beta hydrolase fold protein YP_005057846.1 KEGG: aca:ACP_1759 hypothetical protein YP_005057847.1 KEGG: aca:ACP_0020 glycosyl hydrolase family, 3; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005057848.1 KEGG: mjl:Mjls_4525 amidohydrolase 2; PFAM: Amidohydrolase 2 YP_005057849.1 PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; KEGG: aca:ACP_2409 chloride transporter, ClC family YP_005057850.1 PFAM: Amylo-alpha-1,6-glucosidase; KEGG: aba:Acid345_0376 glycogen debranching protein YP_005057851.1 KEGG: msv:Mesil_0602 flavin reductase domain protein FMN-binding protein; PFAM: Flavin reductase-like, FMN-binding; SMART: Flavin reductase-like, FMN-binding YP_005057852.1 PFAM: Phosphoesterase; Phospholipase C, bacterial, C-terminal; manually curated; KEGG: aca:ACP_2725 Tat pathway signal sequence domain protein; TIGRFAM: Phospholipase C, phosphocholine-specific; Twin-arginine translocation pathway, signal sequence YP_005057853.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: hse:Hsero_4546 aryl-alcohol dehydrogenase YP_005057854.1 KEGG: xal:XALc_1885 putative peptidase, S15 family protein; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal YP_005057855.1 PFAM: Multiple antibiotic resistance (MarC)-related; KEGG: cvi:CV_2729 multiple antibiotic resistance protein MarC YP_005057856.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: sus:Acid_2620 hypothetical protein YP_005057857.1 KEGG: sus:Acid_2619 TonB-dependent receptor YP_005057858.1 KEGG: sus:Acid_5553 peptidase M56, BlaR1; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057859.1 KEGG: sus:Acid_6245 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738; Peptidase M56, BlaR1 YP_005057860.1 PFAM: Penicillinase repressor; KEGG: mmr:Mmar10_1882 CopY family transcriptional regulator YP_005057861.1 KEGG: sus:Acid_1238 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057862.1 KEGG: sus:Acid_3739 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057863.1 KEGG: sus:Acid_6245 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057864.1 KEGG: lbz:LbrM29_V2.0120 hypothetical protein YP_005057865.1 KEGG: aba:Acid345_0514 alpha-1,2-mannosidase, putative; TIGRFAM: Alpha-1,2-mannosidase, putative; Twin-arginine translocation pathway, signal sequence; PFAM: Glycosyl hydrolase 92 YP_005057866.1 KEGG: xca:xccb100_1259 exported conserved hypothetical protein; manually curated; PFAM: Uncharacterised conserved protein UCP028846 YP_005057867.1 KEGG: xcv:XCV3210 beta-mannosidase precursor; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding YP_005057868.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6153 TonB-dependent receptor, plug YP_005057869.1 KEGG: aca:ACP_1348 transcriptional regulator, DeoR family; PFAM: HTH transcriptional regulator, DeoR; HTH transcriptional regulator, DeoR N-terminal; SMART: HTH transcriptional regulator, DeoR N-terminal YP_005057870.1 KEGG: aca:ACP_0029 glycosyl hydrolase, family 20; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b YP_005057871.1 PFAM: Protein of unknown function DUF3320; KEGG: bbt:BBta_6903 putative DNA helicase related protein YP_005057872.1 TIGRFAM: Translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; KEGG: sus:Acid_3214 translation elongation factor P; SMART: Elongation factor P, C-terminal YP_005057873.1 TIGRFAM: Glycerol kinase; KEGG: aca:ACP_0837 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal YP_005057874.1 KEGG: aca:ACP_0838 oxidoreductase, FAD-dependent; PFAM: FAD dependent oxidoreductase YP_005057875.1 PFAM: Major intrinsic protein; KEGG: aca:ACP_0839 glycerol uptake facilitator protein YP_005057876.1 KEGG: aca:ACP_2972 alpha,alpha-trehalose-phosphate synthase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; Trehalose-phosphatase; PFAM: Glycosyl transferase, family 20; Trehalose-phosphatase YP_005057877.1 KEGG: tra:Trad_1517 transferase hexapeptide repeat containing protein YP_005057878.1 KEGG: sus:Acid_5553 peptidase M56, BlaR1; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005057879.1 KEGG: msv:Mesil_0291 N-acylglucosamine-6-phosphate 2-epimerase; PFAM: Putative N-acetylmannosamine-6-phosphate epimerase YP_005057880.1 KEGG: sus:Acid_3638 Cna B domain-containing protein YP_005057881.1 PFAM: Glycosyl transferase, family 39; KEGG: aba:Acid345_1201 TPR repeat-containing protein YP_005057882.1 KEGG: cyc:PCC7424_0085 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057883.1 KEGG: aca:ACP_0321 hypothetical protein YP_005057884.1 SMART: Molybdopterin oxidoreductase, Fe4S4 domain; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; TIGRFAM: Formate dehydrogenase, alpha subunit; KEGG: aca:ACP_0320 formate dehydrogenase, alpha subunit; PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding domain; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Molybdopterin oxidoreductase, Fe4S4 domain YP_005057885.1 KEGG: tcu:Tcur_3534 formate dehydrogenase family accessory protein FdhD; TIGRFAM: Formate dehydrogenase, subunit FdhD; PFAM: Formate dehydrogenase, subunit FdhD YP_005057886.1 KEGG: sus:Acid_2933 hypothetical protein YP_005057887.1 KEGG: aca:ACP_2512 hypothetical protein YP_005057888.1 SMART: Cupin 1; TIGRFAM: Bicupin, oxalate decarboxylase/oxidase; Twin-arginine translocation pathway, signal sequence; KEGG: bac:BamMC406_4476 oxalate decarboxylase; PFAM: Cupin 1 YP_005057889.1 KEGG: ngr:NAEGRDRAFT_75750 hypothetical protein YP_005057891.1 KEGG: afm:AFUA_1G01300 GPI anchored protein YP_005057892.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6854 Cna B-type protein YP_005057893.1 PFAM: Lipase, GDSL; KEGG: aca:ACP_0574 lipase/acylhydrolase, GDSL family YP_005057894.1 KEGG: aba:Acid345_2242 TPR repeat-containing protein YP_005057895.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; KEGG: aca:ACP_1477 6-phosphogluconate dehydrogenase NAD-binding domain protein YP_005057896.1 PFAM: Condensation domain; KEGG: dfe:Dfer_0880 condensation domain-containing protein YP_005057897.1 KEGG: bmi:BMEA_A0278 hypothetical protein YP_005057898.1 KEGG: pfr:PFREUD_10200 RNA polymerase sigma-70 factor, sigma-E factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005057899.1 KEGG: rme:Rmet_0596 putative transmembrane transcriptional regulator (anti-sigma factor) YP_005057900.1 KEGG: aca:ACP_0539 hypothetical protein YP_005057901.1 PFAM: Glycosyl transferase, group 1; KEGG: syf:Synpcc7942_2025 glycosyltransferase YP_005057902.1 PFAM: Acyltransferase 3; KEGG: bcg:BCG9842_B3700 acyltransferase family protein YP_005057903.1 PFAM: Acyltransferase 3; KEGG: chu:CHU_0898 acyltransferase family protein YP_005057904.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_1689 acyltransferase family protein YP_005057905.1 KEGG: afr:AFE_1350 hypothetical protein YP_005057906.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_1689 acyltransferase family protein YP_005057907.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_3347 putative acyltransferase YP_005057908.1 PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: aba:Acid345_3311 polysaccharide export protein YP_005057909.1 TIGRFAM: Exopolysaccharide synthesis protein; KEGG: aca:ACP_0755 chain length determinant family protein; PFAM: Lipopolysaccharide biosynthesis; Cobyrinic acid a,c-diamide synthase YP_005057910.1 PFAM: Glycosyl transferase, group 1; KEGG: afr:AFE_1355 glycosyl transferase, group 1 family protein YP_005057911.1 PFAM: Glycosyl transferase, group 1; KEGG: rmr:Rmar_1148 glycosyl transferase group 1 YP_005057912.1 PFAM: Glycosyl transferase, group 1; KEGG: afr:AFE_1351 glycosyl transferase, group 1 family protein YP_005057913.1 PFAM: Glycosyl transferase, group 1; KEGG: ter:Tery_1099 glycosyl transferase, group 1 YP_005057914.1 PFAM: Glycosyl transferase, group 1; KEGG: cyn:Cyan7425_4956 glycosyl transferase group 1 YP_005057915.1 KEGG: cyn:Cyan7425_4954 hypothetical protein YP_005057916.1 PFAM: Glycosyl transferase, family 2; KEGG: bgf:BC1003_1443 glycosyl transferase family 2 YP_005057917.1 KEGG: cyn:Cyan7425_4952 hypothetical protein YP_005057918.1 PFAM: Acyltransferase 3; KEGG: mxa:MXAN_1049 acyltransferase family protein YP_005057919.1 KEGG: plm:Plim_4019 hypothetical protein YP_005057920.1 PFAM: Acyltransferase 3; KEGG: amu:Amuc_1793 acyltransferase 3 YP_005057922.1 PFAM: Glycosyl transferase, family 2; KEGG: cyt:cce_0378 glycosyl transferase family protein YP_005057923.1 KEGG: chu:CHU_0881 hypothetical protein YP_005057924.1 PFAM: NHL repeat; KEGG: sli:Slin_6292 PA14 domain protein YP_005057925.1 KEGG: ame:726734 hypothetical protein LOC726734 YP_005057926.1 KEGG: aca:ACP_0354 hypothetical protein YP_005057927.1 PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; Tetratricopeptide TPR-4; KEGG: sus:Acid_4566 TPR repeat-containing protein YP_005057928.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_2982 Cna B-type protein YP_005057929.1 KEGG: sml:Smlt1473 poly(beta-D-mannuronate) lyase YP_005057930.1 KEGG: cpi:Cpin_3698 hypothetical protein YP_005057931.1 KEGG: aba:Acid345_1927 hypothetical protein YP_005057932.1 KEGG: mrd:Mrad2831_0518 pyrroloquinoline quinone biosynthesis protein PqqB YP_005057933.1 TIGRFAM: Coenzyme PQQ biosynthesis protein C; KEGG: gdj:Gdia_1980 pyrroloquinoline quinone biosynthesis protein PqqC; PFAM: TENA/THI-4 protein/Coenzyme PQQ biosynthesis protein C YP_005057934.1 TIGRFAM: Coenzyme PQQ synthesis D, bacteria; KEGG: mei:Msip34_1526 coenzyme PQQ synthesis D YP_005057935.1 TIGRFAM: Coenzyme PQQ biosynthesis protein E, bacteria; PFAM: Radical SAM; KEGG: mno:Mnod_5988 pyrroloquinoline quinone biosynthesis protein PqqE; SMART: Elongator protein 3/MiaB/NifB YP_005057936.1 TIGRFAM: 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; KEGG: dra:DR_A0291 2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase; PFAM: Aldehyde-lyase domain YP_005057937.1 KEGG: bpt:Bpet0581 hypothetical protein YP_005057938.1 KEGG: aca:ACP_1653 hypothetical protein YP_005057939.1 KEGG: ncr:NCU03056 hypothetical protein YP_005057940.1 PFAM: Protein of unknown function DUF507; KEGG: aca:ACP_0998 hypothetical protein YP_005057941.1 PFAM: Protein of unknown function DUF507; KEGG: aca:ACP_0999 hypothetical protein YP_005057942.1 KEGG: aca:ACP_1000 hypothetical protein YP_005057943.1 KEGG: aca:ACP_1001 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1 YP_005057944.1 KEGG: aca:ACP_3033 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005057945.1 PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; KEGG: aca:ACP_3032 hypothetical protein YP_005057946.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_3031 cation efflux system protein, putative YP_005057947.1 TIGRFAM: Hopanoid biosynthesis associated radical SAM protein HpnJ; PFAM: Radical SAM; Cobalamin (vitamin B12)-binding; KEGG: aca:ACP_3030 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_005057948.1 PFAM: Drug/metabolite transporter; KEGG: aca:ACP_3029 hypothetical protein YP_005057949.1 PFAM: Drug/metabolite transporter; KEGG: aca:ACP_3027 hypothetical protein YP_005057950.1 KEGG: aca:ACP_0813 phytoene desaturase; PFAM: Squalene/phytoene synthase YP_005057951.1 KEGG: aca:ACP_0815 oxidoreductase, zinc-binding dehydrogenase family; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal YP_005057952.1 KEGG: aca:ACP_0179 transporter, putative ER-chloroplast lipid translocase family; TIGRFAM: Domain of unknown function DUF140; PFAM: Domain of unknown function DUF140 YP_005057953.1 PFAM: ABC transporter-like; KEGG: aca:ACP_0178 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057954.1 PFAM: Dienelactone hydrolase; KEGG: meh:M301_1113 dienelactone hydrolase YP_005057955.1 PFAM: Phosphopantetheine-binding; KEGG: sus:Acid_0744 phosphopantetheine-binding YP_005057956.1 KEGG: sus:Acid_0743 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal YP_005057957.1 KEGG: sco:SCO5893 oxidoreductase; PFAM: NAD-dependent epimerase/dehydratase YP_005057958.1 KEGG: eat:EAT1b_0424 pyridoxal phosphate-dependent acyltransferase; PFAM: Aminotransferase, class I/classII YP_005057959.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aca:ACP_0495 inorganic anion ABC transporter, nitrate/nitrite/cyanate uptake transporter (NitT) family, permease protein YP_005057960.1 PFAM: ABC nitrate/sulphonate/bicarbonate family transporter, ATPase subunit; ABC transporter-like; KEGG: aca:ACP_0494 ion ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005057961.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related; KEGG: nve:NEMVE_v1g231483 hypothetical protein; PFAM: dTDP-4-dehydrorhamnose 3,5-epimerase-related YP_005057962.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: bmj:BMULJ_00638 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_005057963.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: eba:ebA2277 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_005057964.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; KEGG: ppu:PP_1785 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_005057965.1 PFAM: Glycosyl transferase, family 2; KEGG: xau:Xaut_3560 glycosyl transferase family protein YP_005057966.1 PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: aca:ACP_1872 polysaccharide biosynthesis/export protein YP_005057967.1 KEGG: aba:Acid345_0833 hypothetical protein YP_005057968.1 PFAM: Acyltransferase 3; KEGG: phe:Phep_3136 acyltransferase 3 YP_005057969.1 PFAM: Cupin 2, conserved barrel; KEGG: aca:ACP_0848 cupin domain protein YP_005057970.1 PFAM: Major facilitator superfamily MFS-1; KEGG: xau:Xaut_2308 major facilitator transporter YP_005057971.1 KEGG: gym:GYMC10_3545 phosphoesterase PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal YP_005057972.1 TIGRFAM: YVTN beta-propeller repeat; PFAM: Phosphoesterase; KEGG: sus:Acid_4558 YVTN beta-propeller repeat-containing protein; SMART: WD40 repeat YP_005057973.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: sus:Acid_4186 hypothetical protein YP_005057974.1 KEGG: aca:ACP_1286 hypothetical protein YP_005057975.1 KEGG: aba:Acid345_2768 hypothetical protein YP_005057976.1 PFAM: Protein of unknown function DUF2012; KEGG: aca:ACP_0435 hypothetical protein YP_005057977.1 KEGG: sus:Acid_2568 hypothetical protein YP_005057978.1 PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; KEGG: sno:Snov_3678 bifunctional deaminase-reductase domain protein YP_005057979.1 PFAM: Acyltransferase 3; KEGG: phe:Phep_1980 acyltransferase 3 YP_005057980.1 KEGG: aca:ACP_0020 glycosyl hydrolase family, 3; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005057981.1 KEGG: sme:SMa0180 epimerase; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_005057982.1 KEGG: bmj:BMULJ_04098 beta-glucosidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005057985.1 KEGG: apt:APA01_01990 glycosyl transferase; TIGRFAM: Glycosyl transferase, family 2, hopene-associated, HpnB; PFAM: Glycosyl transferase, family 2 YP_005057986.1 PFAM: MEKHLA; KEGG: bpr:GBP346_A2162 mekhla domain protein YP_005057987.1 PFAM: Protein of unknown function DUF2165, transmembrane; KEGG: aba:Acid345_0774 small integral membrane protein YP_005057988.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: bid:Bind_0900 TetR family transcriptional regulator YP_005057990.1 KEGG: swi:Swit_1907 hypothetical protein YP_005057991.1 KEGG: xcv:XCV2118 putative secreted protein YP_005057992.1 KEGG: msm:MSMEG_1746 6-hydroxy-D-nicotine oxidase; PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like YP_005057993.1 KEGG: amr:AM1_6316 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005057994.1 PFAM: Putative cyclase; KEGG: scl:sce7017 hypothetical protein YP_005057995.1 KEGG: iag:Igag_0491 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain YP_005057996.1 KEGG: pfl:PFL_3601 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005057997.1 KEGG: met:M446_0049 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005057998.1 KEGG: aca:ACP_3457 hypothetical protein YP_005057999.1 KEGG: sus:Acid_5292 DoxX YP_005058000.1 KEGG: sus:Acid_7648 hypothetical protein YP_005058001.1 KEGG: aca:ACP_1928 sorbitol oxidase; PFAM: FAD linked oxidase, N-terminal; D-arabinono-1,4-lactone oxidase YP_005058002.1 KEGG: aba:Acid345_0579 beta-glucuronidase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_005058003.1 KEGG: amt:Amet_3687 alkylhydroperoxidase; TIGRFAM: Alkylhydroperoxidase AhpD core; PFAM: Carboxymuconolactone decarboxylase YP_005058004.1 PFAM: CAP domain; KEGG: aca:ACP_0336 SCP-like extracellular family protein YP_005058005.1 PFAM: Glycosyl transferase WecB/TagA/CpsF; KEGG: aca:ACP_0344 glycosyl transferaseWecB/TagA/CpsF family YP_005058006.1 KEGG: aca:ACP_0749 NAD dependent epimerase/dehydratase family protein; PFAM: NAD-dependent epimerase/dehydratase YP_005058007.1 KEGG: pfd:PFDG_01863 conserved hypothetical protein YP_005058008.1 KEGG: aca:ACP_0335 ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, permease protein; manually curated; PFAM: Binding-protein-dependent transport systems inner membrane component YP_005058009.1 TIGRFAM: Phosphodiesterase MJ0936; KEGG: aca:ACP_0636 phosphodiesterase, MJ0936 family YP_005058010.1 PFAM: Binding-protein-dependent transport systems inner membrane component; KEGG: aba:Acid345_3533 ABC peptide transporter, inner membrane subunit YP_005058011.1 KEGG: aca:ACP_0638 CBS/transporter domain protein; PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; SMART: Cystathionine beta-synthase, core YP_005058012.1 PFAM: Protein of unknown function DUF433; KEGG: cyh:Cyan8802_1913 protein of unknown function DUF433 YP_005058013.1 KEGG: aca:ACP_0230 thioredoxin; TIGRFAM: Thioredoxin; PFAM: Thioredoxin domain YP_005058014.1 KEGG: aca:ACP_0229 homoserine kinase; TIGRFAM: Homoserine kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal YP_005058015.1 TIGRFAM: Threonine synthase; KEGG: aca:ACP_0228 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005058016.1 KEGG: aca:ACP_0226 molybdate ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; PFAM: Bacterial extracellular solute-binding, family 1 YP_005058017.1 KEGG: aca:ACP_0225 molybdate ABC transporter, permease protein; TIGRFAM: Molybdate ABC transporter, permease protein; PFAM: Binding-protein-dependent transport systems inner membrane component YP_005058018.1 PFAM: ABC transporter-like; KEGG: aca:ACP_0224 molybdate ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005058019.1 TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; KEGG: aca:ACP_0343 UDP-N-acetylmuramate dehydrogenase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal YP_005058020.1 PFAM: Uncharacterised protein family UPF0403; KEGG: aca:ACP_0268 hypothetical protein YP_005058021.1 TIGRFAM: Pyrroline-5-carboxylate reductase; KEGG: aca:ACP_1238 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent YP_005058022.1 PFAM: Heme A synthase/Protoheme IX farnesyltransferase; KEGG: aca:ACP_1239 cytochrome oxidase assembly protein YP_005058023.1 KEGG: scl:sce6419 4-aminobutyrate transaminase; PFAM: Aminotransferase class-III YP_005058024.1 KEGG: sus:Acid_7658 NCS1 nucleoside transporter; TIGRFAM: Nucleobase cation symporter-1, NCS1; PFAM: Permease, cytosine/purines, uracil, thiamine, allantoin YP_005058025.1 TIGRFAM: D-hydantoinase; KEGG: sus:Acid_7659 dihydropyrimidinase; PFAM: Amidohydrolase 1 YP_005058026.1 TIGRFAM: Dihydroorotate dehydrogenase, class 1; KEGG: sus:Acid_7660 dihydropyrimidine dehydrogenase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2 YP_005058027.1 KEGG: sus:Acid_7661 glutamate synthase (NADPH) small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region YP_005058028.1 TIGRFAM: Amidase, hydantoinase/carbamoylase; KEGG: msv:Mesil_1867 amidase, hydantoinase/carbamoylase family; PFAM: Peptidase M20 YP_005058029.1 KEGG: aca:ACP_2957 beta-glucosidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005058030.1 KEGG: bth:BT_3161 hypothetical protein YP_005058031.1 KEGG: bvu:BVU_0753 glycoside hydrolase family protein YP_005058032.1 KEGG: gym:GYMC10_4405 carbohydrate binding family 6 YP_005058033.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005058034.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005058035.1 KEGG: aac:Aaci_2204 SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter YP_005058036.1 KEGG: aca:ACP_0066 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D YP_005058037.1 KEGG: sma:SAV_1077 melibiase YP_005058038.1 KEGG: aca:ACP_0065 transcriptional regulator, LacI family; PFAM: HTH transcriptional regulator, LacI; Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_005058039.1 KEGG: rca:Rcas_2118 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058040.1 KEGG: rca:Rcas_2117 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_005058041.1 PFAM: RhaT l-rhamnose-proton symport 2; KEGG: bth:BT_2953 rhamnose-proton symporter YP_005058042.1 KEGG: hel:HELO_1505 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal YP_005058043.1 KEGG: aca:ACP_0788 glucokinase; PFAM: ROK YP_005058044.1 KEGG: aca:ACP_0025 MFS transporter, SP family; TIGRFAM: Sugar/inositol transporter; PFAM: General substrate transporter YP_005058045.1 PFAM: Glycosyl hydrolase, family 88; KEGG: aca:ACP_0551 glycosyl hydrolase family 88 protein YP_005058046.1 KEGG: aca:ACP_0787 putative LacI-family transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005058047.1 KEGG: ote:Oter_0067 LytTR family two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain YP_005058048.1 KEGG: ote:Oter_0068 signal transduction histidine kinase, LytS; PFAM: Signal transduction histidine kinase, internal region; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005058049.1 KEGG: nhl:Nhal_1083 hypothetical protein YP_005058050.1 KEGG: dfe:Dfer_3081 drug resistance transporter, Bcr/CflA subfamily; TIGRFAM: Drug resistance transporter Bcr/CflA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005058051.1 KEGG: aca:ACP_0863 S1 RNA binding domain protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA-binding domain; SMART: RNA-binding domain, S1; Helix-hairpin-helix DNA-binding motif, class 1; Resolvase, RNase H-like fold YP_005058052.1 KEGG: aca:ACP_0977 recombination factor protein RarA; PFAM: MgsA AAA+ ATPase C-terminal; ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core YP_005058053.1 KEGG: aca:ACP_0979 RNA methyltransferase, TrmH family protein; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; SMART: RNA 2-O ribose methyltransferase, substrate binding YP_005058054.1 manually curated; TIGRFAM: Sua5/YciO/YrdC/YwlC; KEGG: aca:ACP_0981 SUA5/YciO/YrdC/YwlC family protein; PFAM: Sua5/YciO/YrdC, N-terminal YP_005058055.1 PFAM: Domain of unknown function DUF218; KEGG: aca:ACP_0982 hypothetical protein YP_005058056.1 PFAM: Fatty acid hydroxylase; KEGG: phe:Phep_1488 fatty acid hydroxylase YP_005058057.1 KEGG: aca:ACP_1055 peptide chain release factor 2, programmed frameshift YP_005058058.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; manually curated; TIGRFAM: Apolipoprotein N-acyltransferase; KEGG: aca:ACP_3149 apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase YP_005058059.1 KEGG: cci:CC1G_03813 hypothetical protein YP_005058060.1 PFAM: Methyltransferase type 11; KEGG: aca:ACP_3155 hypothetical protein YP_005058061.1 KEGG: aca:ACP_0978 hypothetical protein YP_005058062.1 SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal; TIGRFAM: O-succinylbenzoic acid (OSB) synthetase, low GC Gram-positive bacteria/archaea; KEGG: aca:ACP_0173 O-succinylbenzoic acid synthetase; PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal; Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_005058063.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aba:Acid345_2186 GCN5-related N-acetyltransferase YP_005058064.1 KEGG: aca:ACP_0171 MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core YP_005058065.1 PFAM: Protein of unknown function DUF3311; KEGG: reu:Reut_B4493 hypothetical protein YP_005058066.1 TIGRFAM: Excinuclease ABC, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; KEGG: aca:ACP_1243 excinuclease ABC subunit C; SMART: Excinuclease ABC, C subunit, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1 YP_005058067.1 PFAM: PilT protein, N-terminal; KEGG: amr:AM1_2234 hypothetical protein YP_005058068.1 KEGG: gbm:Gbem_3980 aldo/keto reductase YvgN YP_005058069.1 PFAM: Beta-lactamase-related; KEGG: sus:Acid_2285 beta-lactamase YP_005058070.1 PFAM: Uncharacterised protein family, zinc metallopeptidase putative; KEGG: sus:Acid_6584 protein of unknown function, zinc metallopeptidase putative YP_005058071.1 PFAM: Glycosyl transferase, family 39; KEGG: sus:Acid_5939 glycosyl transferase family protein YP_005058072.1 PFAM: Amino acid permease domain; KEGG: aba:Acid345_3351 amino acid transporter YP_005058073.1 TIGRFAM: Ribosomal RNA adenine dimethylase; PFAM: Ribosomal RNA adenine methylase transferase; KEGG: aca:ACP_0528 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal YP_005058074.1 TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; KEGG: aca:ACP_0531 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_005058075.1 PFAM: Cell wall hydrolase/autolysin, catalytic; KEGG: aca:ACP_1009 N-acetylmuramoyl-L-alanine amidase domain protein YP_005058076.1 KEGG: aca:ACP_1011 putative lipoprotein; PFAM: GerMN domain; SMART: GerMN domain YP_005058077.1 TIGRFAM: Glutamate racemase; KEGG: aca:ACP_1012 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_005058078.1 PFAM: Protein of unknown function DUF55; KEGG: aba:Acid345_3598 hypothetical protein YP_005058079.1 KEGG: ddr:Deide_3p01700 putative isoamylase, precursor; PFAM: Glycoside hydrolase, family 13, N-terminal; Glycosyl hydrolase, family 13, catalytic domain YP_005058080.1 KEGG: aca:ACP_1013 enoyl-[acyl-carrier-protein] reductase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058081.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005058082.1 KEGG: aca:ACP_0346 ABC transporter, (putative) drug resistance ATPase (drug RA) family, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_005058083.1 KEGG: srt:Srot_2219 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi n synthase-like protein YP_005058084.1 KEGG: aca:ACP_1619 hypothetical protein YP_005058085.1 KEGG: deg:DehalGT_0041 hypothetical protein YP_005058086.1 PFAM: Uncharacterised protein family UPF0747; KEGG: aca:ACP_1620 hypothetical protein YP_005058087.1 PFAM: NUDIX hydrolase domain; KEGG: aca:ACP_1622 hydrolase, NUDIX family YP_005058088.1 KEGG: aca:ACP_1623 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein YP_005058089.1 KEGG: aca:ACP_1624 PHP domain protein; PFAM: PHP, C-terminal; SMART: DNA-directed DNA polymerase X; Helix-hairpin-helix DNA-binding motif, class 1; Polymerase/histidinol phosphatase, N-terminal YP_005058090.1 KEGG: aca:ACP_1625 Tat pathway signal sequence domain protein YP_005058091.1 KEGG: aca:ACP_1787 hypothetical protein YP_005058092.1 PFAM: FAD dependent oxidoreductase; KEGG: aba:Acid345_1735 glycine oxidase ThiO YP_005058093.1 TIGRFAM: 2-methylcitrate synthase/citrate synthase type I; KEGG: aca:ACP_1789 citrate synthase 2; PFAM: Citrate synthase-like YP_005058094.1 PFAM: DinB; KEGG: aba:Acid345_3332 hypothetical protein YP_005058095.1 KEGG: aba:Acid345_2334 hypothetical protein YP_005058096.1 KEGG: aba:Acid345_2334 hypothetical protein YP_005058097.1 KEGG: aca:ACP_1610 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_005058098.1 PFAM: Amino acid permease domain; KEGG: hau:Haur_0002 hypothetical protein YP_005058099.1 KEGG: xop:PXO_03223 glutathione peroxidase; PFAM: Glutathione peroxidase YP_005058100.1 KEGG: cak:Caul_3986 peptidase M61 domain-containing protein; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF YP_005058101.1 TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; KEGG: aca:ACP_3338 uroporphyrinogen-III C-methyltransferase; PFAM: Tetrapyrrole methylase YP_005058102.1 TIGRFAM: Sirohaem synthase, N-terminal; KEGG: aca:ACP_3018 siroheme synthase, N-terminal domain protein YP_005058103.1 KEGG: aca:ACP_3020 nitrite reductase; PFAM: Nitrite/sulphite reductase 4Fe-4S domain; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like YP_005058104.1 KEGG: aca:ACP_3318 phenylalanine 4-monooxygenase; PFAM: Aromatic amino acid hydroxylase, C-terminal YP_005058105.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aca:ACP_2813 transporter, major facilitator family YP_005058106.1 KEGG: phu:Phum_PHUM012930 acylamino-acid-releasing enzyme, putative YP_005058107.1 KEGG: sus:Acid_3924 hypothetical protein YP_005058108.1 PFAM: Peptidase M29, aminopeptidase II; KEGG: sus:Acid_3925 aminopeptidase YP_005058109.1 KEGG: cqu:CpipJ_CPIJ001254 nucleolar GTP-binding protein 2 YP_005058110.1 PFAM: NHL repeat; Two component regulator propeller; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005058111.1 KEGG: sus:Acid_3926 carboxylate-amine ligase; TIGRFAM: Carboxylate-amine ligase, predicted; PFAM: Glutamate--cysteine ligase, GCS2 YP_005058112.1 KEGG: mxa:MXAN_1340 hypothetical protein YP_005058113.1 KEGG: sus:Acid_3927 glutathione synthase/ribosomal protein S6 modification glutaminyl transferase-like protein YP_005058114.1 PFAM: Putative esterase; KEGG: sus:Acid_3928 putative esterase YP_005058115.1 PFAM: Putative esterase; KEGG: sus:Acid_3934 putative esterase YP_005058116.1 KEGG: aca:ACP_2809 ribosomal protein S16; TIGRFAM: Ribosomal protein S16; PFAM: Ribosomal protein S16 YP_005058117.1 KEGG: ara:Arad_3336 hypothetical protein YP_005058118.1 KEGG: aca:ACP_2807 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein YP_005058119.1 TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; KEGG: aca:ACP_2806 tRNA (guanine-N(1)-)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_005058120.1 KEGG: sus:Acid_2539 hypothetical protein YP_005058121.1 KEGG: aca:ACP_2803 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; PFAM: Ribosomal protein L19 YP_005058122.1 KEGG: aca:ACP_2802 ribonuclease HII; PFAM: Ribonuclease HII/HIII YP_005058123.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: aca:ACP_2801 GlcNAc-PI de-N-acetylase family protein YP_005058124.1 KEGG: aor:AO090012000774 hypothetical protein YP_005058125.1 PFAM: Protein of unknown function DUF1800; KEGG: aba:Acid345_2867 hypothetical protein YP_005058126.1 PFAM: Amino acid permease domain; KEGG: aba:Acid345_3333 amino acid transporter YP_005058127.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005058128.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: aca:ACP_3400 GlcNAc-PI de-N-acetylase family protein YP_005058129.1 KEGG: aca:ACP_0941 putative lipoprotein YP_005058130.1 KEGG: aca:ACP_0941 putative lipoprotein YP_005058131.1 TIGRFAM: Chromosome segregation protein SMC; PFAM: RecF/RecN/SMC; SMCs flexible hinge; KEGG: aca:ACP_0696 chromosome segregation protein SMC; SMART: SMCs flexible hinge YP_005058132.1 PFAM: Colicin V production, CvpA; KEGG: aca:ACP_0698 CvpA family protein YP_005058133.1 PFAM: Helix-turn-helix, Fis-type; KEGG: aca:ACP_0699 transcriptional regulator, fis family YP_005058134.1 PFAM: Type II/III secretion system; KEGG: aca:ACP_0701 outer membrane secretin YP_005058135.1 PFAM: Domain of unknown function DUF125, transmembrane; KEGG: aca:ACP_1765 hypothetical protein YP_005058136.1 PFAM: YkuD domain; KEGG: swi:Swit_3470 hypothetical protein YP_005058137.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: aca:ACP_0498 sensory box histidine kinase/response regulator; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAC motif; PAS YP_005058138.1 KEGG: pif:PITG_13568 hypothetical protein YP_005058139.1 KEGG: nha:Nham_2535 cyclic nucleotide-binding domain-containing protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain YP_005058140.1 KEGG: hse:Hsero_2398 hypothetical protein YP_005058141.1 TIGRFAM: Glycogen debranching enzyme; KEGG: gbm:Gbem_0822 glycogen debranching enzyme GlgX; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal YP_005058142.1 KEGG: mch:Mchl_1416 hypothetical protein YP_005058143.1 PFAM: UspA; KEGG: dak:DaAHT2_0427 UspA domain protein YP_005058144.1 PFAM: Streptococcal 67kDa myosin-cross-reactive antigen-like; KEGG: bxe:Bxe_A1856 myosin-cross-reactive antigen YP_005058145.1 SMART: ATPase, P-type cation-transporter, N-terminal; TIGRFAM: ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: bxe:Bxe_B1515 divalent cation transporting (P-type) ATPase; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase; ATPase, P-type cation-transporter, N-terminal YP_005058146.1 KEGG: tpr:Tpau_3122 hypothetical protein YP_005058147.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: ppf:Pput_1986 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_005058148.1 PFAM: DSBA-like thioredoxin domain; KEGG: rhi:NGR_b00650 hypothetical protein YP_005058149.1 PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal; manually curated; KEGG: sus:Acid_5165 alcohol dehydrogenase; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2 YP_005058150.1 KEGG: cin:100178764 similar to Thrombospondin-3 YP_005058151.1 PFAM: Spermine synthase; KEGG: tin:Tint_0280 spermine synthase YP_005058152.1 KEGG: cag:Cagg_0742 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005058153.1 KEGG: dbr:Deba_0008 response regulator receiver protein YP_005058154.1 PFAM: Protein of unknown function DUF1275; KEGG: reh:H16_A2205 hypothetical protein YP_005058155.1 PFAM: Major facilitator superfamily MFS-1; KEGG: ypb:YPTS_1979 major facilitator transporter YP_005058156.1 KEGG: aba:Acid345_3921 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase B/oxoprolinase YP_005058157.1 KEGG: aba:Acid345_2039 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal YP_005058158.1 KEGG: dae:Dtox_0202 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: GntR, C-terminal; HTH transcriptional regulator, GntR YP_005058159.1 PFAM: Protein of unknown function DUF2891; KEGG: gfo:GFO_2125 hypothetical protein YP_005058160.1 PFAM: Protein of unknown function DUF2891; KEGG: hne:HNE_2127 hypothetical protein YP_005058161.1 KEGG: sus:Acid_3065 hypothetical protein YP_005058162.1 KEGG: fre:Franean1_3558 binding-protein-dependent transport systems inner membrane component YP_005058163.1 TIGRFAM: Acetolactate synthase, catabolic; KEGG: aha:AHA_1126 acetolactate synthase; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain YP_005058164.1 TIGRFAM: Alpha-acetolactate decarboxylase; KEGG: sye:Syncc9902_1512 alpha-acetolactate decarboxylase; PFAM: Alpha-acetolactate decarboxylase YP_005058165.1 PFAM: Cytochrome d ubiquinol oxidase, subunit II; KEGG: scl:sce2438 terminal oxidase subunit II YP_005058166.1 PFAM: Cytochrome d ubiquinol oxidase, subunit I; KEGG: afw:Anae109_0981 cytochrome bd ubiquinol oxidase subunit I YP_005058167.1 KEGG: cpi:Cpin_4837 D-lactate dehydrogenase (cytochrome); PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal YP_005058168.1 PFAM: Secretion protein HlyD; KEGG: aca:ACP_1308 transporter, MFP family YP_005058169.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aca:ACP_1307 MFS transporter, drug:H+ antiporter-2 (DHA2) family YP_005058170.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_1306 outer membrane efflux protein family YP_005058171.1 KEGG: gdj:Gdia_2817 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR YP_005058172.1 PFAM: Isochorismatase-like; KEGG: bid:Bind_2950 isochorismatase hydrolase YP_005058173.1 KEGG: bid:Bind_2951 hypothetical protein YP_005058174.1 PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: gdj:Gdia_2814 major facilitator superfamily MFS_1 YP_005058175.1 KEGG: aba:Acid345_2442 periplasmic sensor signal transduction histidine kinase; PFAM: Two component regulator three Y; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; Two component regulator propeller; SMART: ATPase-like, ATP-binding domain YP_005058176.1 KEGG: aba:Acid345_2443 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005058177.1 KEGG: ret:RHE_PF00223 two-component response regulator protein (NodW mutant supressor protein); PFAM: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain; SMART: Transcription regulator LuxR, C-terminal; Signal transduction response regulator, receiver domain YP_005058178.1 KEGG: aba:Acid345_2444 hypothetical protein YP_005058179.1 KEGG: tfu:Tfu_0168 hypothetical protein YP_005058180.1 KEGG: ere:EUBREC_3479 ATP-dependent metalloprotease FtsH YP_005058181.1 KEGG: swd:Swoo_0280 integral membrane sensor signal transduction histidine kinase YP_005058182.1 KEGG: mbn:Mboo_1259 hypothetical protein YP_005058183.1 KEGG: aca:ACP_1393 OmpA family protein YP_005058184.1 PFAM: NHL repeat; KEGG: ngr:NAEGRDRAFT_70916 hypothetical protein YP_005058185.1 KEGG: bde:BDP_0482 PtsG PTS system, glucose-specific IIABC component YP_005058186.1 KEGG: sus:Acid_2471 serine/threonine protein kinase; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat YP_005058187.1 PFAM: Peptidase M64, IgA; KEGG: sma:SAV_5905 hypothetical protein YP_005058188.1 PFAM: Glycoside hydrolase, family 5; KEGG: cth:Cthe_0821 coagulation factor 5/8 type-like protein YP_005058189.1 KEGG: scl:sce3341 putative secreted protein YP_005058190.1 KEGG: aba:Acid345_2219 serine/threonine protein kinase; PFAM: Signal transduction response regulator, C-terminal; WD40-like Beta Propeller; SMART: Signal transduction response regulator, C-terminal YP_005058191.1 KEGG: sus:Acid_7250 glutathione peroxidase; PFAM: Glutathione peroxidase YP_005058192.1 PFAM: Peptidase M23; KEGG: sus:Acid_1535 peptidase M23B YP_005058193.1 PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; KEGG: sus:Acid_5714 TonB-dependent receptor YP_005058194.1 KEGG: bge:BC1002_1278 WD40 repeat, subgroup; PFAM: WD40 repeat, subgroup; SMART: WD40 repeat YP_005058195.1 KEGG: ote:Oter_0313 immunoglobulin I-set domain-containing protein; PFAM: Coagulation factor 5/8 type, C-terminal; Fibronectin, type III; Putative Ig; SMART: LamG-like jellyroll fold; Fibronectin, type III YP_005058196.1 KEGG: llo:LLO_3124 quinone oxidoreductase; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like YP_005058197.1 KEGG: mpi:Mpet_0327 tetratricopeptide repeat-containing protein YP_005058198.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: slt:Slit_1271 serine/threonine protein kinase; SMART: Tetratricopeptide repeat YP_005058199.1 PFAM: PAAR motif; KEGG: rrs:RoseRS_1664 PaaR repeat-containing protein YP_005058200.1 KEGG: pde:Pden_1248 extracellular solute-binding protein YP_005058201.1 KEGG: gbm:Gbem_3035 type VI secretion system VgrG family protein; TIGRFAM: Rhs element Vgr protein, subgroup; Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D YP_005058202.1 TIGRFAM: ATPase, type VI secretion system, ClpV1; PFAM: ATPase, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: sus:Acid_0239 ATPase; SMART: ATPase, AAA+ type, core YP_005058203.1 KEGG: sus:Acid_0238 hypothetical protein; TIGRFAM: Protein of unknown function DUF1305; PFAM: Protein of unknown function DUF1305 YP_005058204.1 KEGG: sus:Acid_0237 hypothetical protein; TIGRFAM: Type VI secretion system, VCA0110; PFAM: Type VI secretion system, VCA0110 YP_005058205.1 KEGG: sus:Acid_0236 hypothetical protein; TIGRFAM: Type VI secretion system, lysozyme-related; PFAM: GPW/gp25 YP_005058206.1 KEGG: sus:Acid_0235 ImpA domain-containing protein; TIGRFAM: Type VI secretion system-associated, ImpA; PFAM: ImpA, N-terminal YP_005058207.1 PFAM: virulence protein, SciE type; KEGG: sus:Acid_0234 virulence protein, SciE type YP_005058208.1 PFAM: Virulence factor, secretion apparatus; KEGG: msl:Msil_2362 type VI secretion system effector, Hcp1 family YP_005058209.1 KEGG: sus:Acid_0232 hypothetical protein; TIGRFAM: Protein of unknown function DUF877; PFAM: Protein of unknown function DUF877 YP_005058210.1 KEGG: sus:Acid_0231 hypothetical protein; TIGRFAM: Uncharacterised conserved protein UCP028301; PFAM: Uncharacterised conserved protein UCP028301 YP_005058212.1 KEGG: sus:Acid_0227 hypothetical protein; TIGRFAM: Protein of unknown function DUF876; PFAM: Protein of unknown function DUF876 YP_005058213.1 KEGG: sus:Acid_0226 hypothetical protein YP_005058214.1 KEGG: sus:Acid_0225 hypothetical protein; TIGRFAM: Protein of unknown function DUF876; PFAM: Protein of unknown function DUF876 YP_005058215.1 KEGG: sus:Acid_0224 hypothetical protein; TIGRFAM: Type IV / VI secretion system, DotU; PFAM: Type IV / VI secretion system, DotU YP_005058216.1 PFAM: ImcF-related; Domain of unknown function DUF1215; KEGG: sus:Acid_0223 ImcF domain-containing protein YP_005058217.1 PFAM: Sporulation stage II, protein E C-terminal; KEGG: aca:ACP_1026 serine/threonine protein phosphatase, 2C family; SMART: Protein phosphatase 2C-like YP_005058218.1 PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal; manually curated; KEGG: afw:Anae109_0596 6-phosphogluconate dehydrogenase-like protein; TIGRFAM: 6-phosphogluconate dehydrogenase-related protein YP_005058219.1 KEGG: aca:ACP_2435 cytochrome c oxidase, subunit II; TIGRFAM: Cytochrome c oxidase, subunit II; PFAM: Cytochrome c oxidase subunit II C-terminal; Cytochrome C oxidase subunit II, transmembrane domain; Cytochrome c, class I YP_005058220.1 KEGG: sus:Acid_7581 cytochrome-c oxidase; TIGRFAM: Cytochrome c oxidase, subunit I bacterial type; PFAM: Cytochrome c oxidase, subunit I YP_005058221.1 PFAM: Cytochrome c oxidase, subunit III; KEGG: sus:Acid_7582 cytochrome c oxidase, subunit III YP_005058222.1 KEGG: aca:ACP_2439 hypothetical protein YP_005058223.1 PFAM: Cytochrome c, class I; KEGG: aca:ACP_2440 cytochrome c family protein YP_005058224.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sus:Acid_7585 Rieske (2Fe-2S) domain-containing protein YP_005058225.1 PFAM: Cytochrome c, class I; KEGG: aca:ACP_2442 putative ubiquinol-cytochrome c reductase, cytochrome b subunit YP_005058226.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: sus:Acid_7587 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_005058228.1 TIGRFAM: Methylpurine-DNA glycosylase (MPG); KEGG: aca:ACP_2287 DNA-3-methyladenine glycosylase; PFAM: Methylpurine-DNA glycosylase (MPG) YP_005058229.1 PFAM: Protein of unknown function DUF488; KEGG: nmu:Nmul_A1714 hypothetical protein YP_005058230.1 KEGG: psp:PSPPH_2855 hypothetical protein YP_005058231.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_5667 TonB-dependent receptor, plug YP_005058232.1 KEGG: sus:Acid_1827 hypothetical protein YP_005058233.1 TIGRFAM: PAS; PFAM: CHASE3; ATPase-like, ATP-binding domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: aca:ACP_1972 putative sensory box histidine kinase; SMART: ATPase-like, ATP-binding domain; PAC motif; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005058234.1 KEGG: sme:SMc02632 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD subdomain; SMART: Metal-dependent phosphohydrolase, HD domain YP_005058235.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005058236.1 KEGG: sus:Acid_2992 alpha-N-arabinofuranosidase; PFAM: Alpha-L-arabinofuranosidase, C-terminal; SMART: Alpha-L-arabinofuranosidase, C-terminal YP_005058237.1 KEGG: aba:Acid345_3249 glycoside hydrolase, clan GH-D; PFAM: Glycoside hydrolase, clan GH-D YP_005058238.1 PFAM: Coagulation factor 5/8 type, C-terminal; KEGG: cak:Caul_3611 hypothetical protein YP_005058239.1 KEGG: aba:Acid345_0321 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_005058240.1 KEGG: aca:ACP_2791 L-ribulose-5-phosphate 4-epimerase; PFAM: Class II aldolase/adducin, N-terminal YP_005058241.1 KEGG: aba:Acid345_0326 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_005058242.1 KEGG: sus:Acid_4026 hypothetical protein YP_005058243.1 KEGG: aca:ACP_2787 ribulokinase; PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal YP_005058244.1 KEGG: aca:ACP_2794 transcriptional regulator, LacI family; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005058245.1 KEGG: ttr:Tter_2201 arabinan endo-1,5-alpha-L-arabinosidase; PFAM: Glycoside hydrolase, family 43 YP_005058246.1 KEGG: sus:Acid_3523 hypothetical protein YP_005058247.1 PFAM: Uncharacterised protein family UPF0157; KEGG: gym:GYMC10_3086 protein of unknown function UPF0157 YP_005058248.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ara:Arad_9844 MGC89112 protein YP_005058249.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bcm:Bcenmc03_4021 alpha/beta hydrolase fold YP_005058250.1 KEGG: rce:RC1_0937 epoxide hydrolase; PFAM: Alpha/beta hydrolase fold-1 YP_005058251.1 KEGG: sus:Acid_3137 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005058252.1 TIGRFAM: RNA helicase, ATP-dependent DEAH box, HrpB type; PFAM: RNA helicase, ATP-dependent, HrpB type, C-terminal; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; Helicase-associated domain; KEGG: aca:ACP_0186 ATP-dependent helicase HrpB; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; Helicase-associated domain YP_005058253.1 KEGG: aca:ACP_0994 hypothetical protein; PFAM: Cyclic nucleotide-binding domain; SMART: Cyclic nucleotide-binding domain YP_005058254.1 KEGG: aba:Acid345_2399 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005058255.1 KEGG: aeh:Mlg_1115 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: HTH transcriptional regulator, Crp YP_005058256.1 KEGG: rcu:RCOM_1267820 Polygalacturonase precursor, putative YP_005058257.1 KEGG: met:M446_0137 integral membrane sensor signal transduction histidine kinase YP_005058258.1 KEGG: mdi:METDI2738 putative DNA topoisomerase I YP_005058259.1 KEGG: bpy:Bphyt_5285 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region YP_005058260.1 KEGG: zma:100282586 calmodulin binding protein YP_005058261.1 KEGG: aba:Acid345_1970 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005058262.1 KEGG: ccs:CCNA_00187 NUP-family purine nucleoside permease; manually curated; PFAM: Purine nucleoside permease YP_005058263.1 TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; KEGG: aca:ACP_2117 membrane protein; PFAM: Membrane insertion protein, OxaA/YidC YP_005058264.1 KEGG: kra:Krad_3467 binding-protein-dependent transport systems inner membrane component YP_005058265.1 KEGG: mfe:Mefer_1435 CRISPR-associated protein Cas5 family YP_005058266.1 PFAM: Major facilitator superfamily MFS-1; KEGG: mms:mma_3253 major facilitator transporter YP_005058267.1 KEGG: cai:Caci_0160 transcriptional regulator, AraC family; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005058268.1 PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: bja:blr7676 hypothetical protein YP_005058269.1 KEGG: aca:ACP_2732 hypothetical protein YP_005058270.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_0737 outer membrane efflux protein YP_005058271.1 KEGG: aca:ACP_0735 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005058272.1 PFAM: Acriflavin resistance protein; KEGG: aba:Acid345_0307 acriflavin resistance protein YP_005058273.1 KEGG: aca:ACP_1041 YVTN family beta-propeller repeat protein; TIGRFAM: YVTN beta-propeller repeat; PFAM: Lactonase, 7-bladed beta propeller YP_005058274.1 KEGG: aca:ACP_2690 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain YP_005058275.1 KEGG: aca:ACP_2691 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005058276.1 PFAM: Fibronectin, type III; KEGG: amd:AMED_1486 hypothetical protein YP_005058277.1 KEGG: aca:ACP_3279 fucose: H+ symporter permease; TIGRFAM: L-fucose permease; PFAM: Major facilitator superfamily MFS-1 YP_005058278.1 KEGG: rxy:Rxyl_3012 mandelate racemase/muconate lactonizing-like protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_005058279.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: aca:ACP_3286 oxidoreductase, short chain dehydrogenase/reductase family; SMART: Polyketide synthase/Fatty acid synthase, KR YP_005058280.1 KEGG: aca:ACP_3287 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058281.1 TIGRFAM: UDP-glycosyltransferase, MGT; KEGG: bbt:BBta_4109 putative glycosyltransferase YP_005058282.1 PFAM: Phospholipase/carboxylesterase; KEGG: tra:Trad_2650 phospholipase/carboxylesterase YP_005058283.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sti:Sthe_3215 glyoxalase/bleomycin resistance protein/dioxygenase YP_005058284.1 KEGG: ote:Oter_1671 SSS family solute/sodium (Na+) symporter; TIGRFAM: Sodium/solute symporter, subgroup; PFAM: Sodium/solute symporter YP_005058285.1 KEGG: ote:Oter_1672 hypothetical protein YP_005058286.1 PFAM: GHMP kinase; Galactokinase galactose-binding domain; GHMP kinase, C-terminal; manually curated; KEGG: aca:ACP_2294 galactokinase; TIGRFAM: Galactokinase YP_005058287.1 TIGRFAM: Galactose-1-phosphate uridyl transferase, class I; KEGG: aba:Acid345_1703 galactose-1-phosphate uridylyltransferase; PFAM: Galactose-1-phosphate uridyl transferase, N-terminal; Galactose-1-phosphate uridyl transferase, C-terminal YP_005058288.1 TIGRFAM: UDP-glucose 4-epimerase; KEGG: aca:ACP_3478 UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_005058289.1 PFAM: Chloride channel, voltage gated; KEGG: rpf:Rpic12D_4094 chloride channel core YP_005058290.1 KEGG: ctt:CtCNB1_1350 ferric malleobactin transporter; TIGRFAM: TonB-dependent siderophore receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug YP_005058291.1 PFAM: Septum formation initiator; KEGG: aca:ACP_0142 putative cell division protein FtsL YP_005058292.1 PFAM: Protein of unknown function DUF178; KEGG: aca:ACP_0136 hypothetical protein YP_005058293.1 KEGG: dol:Dole_1751 methyl-accepting chemotaxis sensory transducer YP_005058294.1 KEGG: pmf:P9303_19271 hypothetical protein YP_005058295.1 KEGG: vpa:VP1109 hypothetical protein YP_005058296.1 KEGG: chy:CHY_2490 hypothetical protein YP_005058297.1 KEGG: mgm:Mmc1_1152 putative outer membrane adhesin like proteiin YP_005058298.1 KEGG: krh:KRH_03770 AEC family transporter YP_005058299.1 PFAM: Collagen triple helix repeat; KEGG: bcj:BCAL1560 hypothetical protein YP_005058301.1 KEGG: zro:ZYRO0F00660g hypothetical protein YP_005058302.1 KEGG: mmi:MMAR_4750 integral membrane transporter YP_005058303.1 KEGG: dan:Dana_GF22322 GF22322 gene product from transcript GF22322-RA YP_005058304.1 KEGG: sus:Acid_0153 polymorphic membrane protein YP_005058305.1 KEGG: dac:Daci_5282 ribonuclease YP_005058306.1 PFAM: Ribosomal protein L7/L12, C-terminal; KEGG: aca:ACP_2927 ribosomal protein L7/L12 YP_005058307.1 KEGG: nve:NEMVE_v1g217441 hypothetical protein YP_005058308.1 KEGG: mxa:MXAN_0568 hypothetical protein YP_005058309.1 KEGG: gym:GYMC10_3282 extracellular solute-binding protein family 1 YP_005058310.1 KEGG: snp:SPAP_1737 serine/threonine protein kinase YP_005058311.1 KEGG: mcc:714906 neuralized-like protein 4-like YP_005058312.1 KEGG: mru:mru_1968 MFS transporter YP_005058313.1 PFAM: Pentapeptide repeat; KEGG: dze:Dd1591_2569 pentapeptide repeat protein YP_005058314.1 PFAM: Pentapeptide repeat; KEGG: gvi:gll0206 hypothetical protein YP_005058315.1 KEGG: dze:Dd1591_2568 YD repeat protein YP_005058316.1 KEGG: bpu:BPUM_2790 methyl-accepting chemotaxis protein YP_005058317.1 KEGG: scl:sce3034 endo-1,4-beta-xylanase YP_005058318.1 KEGG: bcj:BCAL2476c putative lysozyme YP_005058319.1 KEGG: mpo:Mpop_4553 secretion protein HlyD family protein YP_005058321.1 KEGG: bbe:BBR47_21480 hypothetical protein YP_005058322.1 KEGG: btr:Btr_0306 phage-related lysozyme YP_005058323.1 KEGG: clj:CLJU_c00410 hypothetical protein YP_005058324.1 KEGG: fra:Francci3_3654 hypothetical protein YP_005058325.1 KEGG: ncr:NCU07863 hypothetical protein YP_005058326.1 KEGG: uma:UM05564.1 hypothetical protein YP_005058327.1 KEGG: rcu:RCOM_1704650 fkbp-rapamycin associated protein, putative YP_005058328.1 KEGG: mxa:MXAN_1195 hypothetical protein YP_005058329.1 KEGG: ppy:PPE_04123 hypothetical protein YP_005058330.1 KEGG: ngr:NAEGRDRAFT_65787 hypothetical protein YP_005058331.1 KEGG: gme:Gmet_2441 cobalamin (vitamin B12) biosynthesis CbiM protein YP_005058332.1 KEGG: ecb:100064897 bicaudal D homolog 1 (Drosophila) YP_005058333.1 KEGG: tmt:Tmath_0157 hydrolase, TatD family YP_005058334.1 KEGG: hdn:Hden_0155 protein of unknown function DUF264 YP_005058335.1 KEGG: afw:Anae109_0718 signal recognition particle-docking protein FtsY YP_005058336.1 KEGG: dpo:Dpse_GA27066 GA27066 gene product from transcript GA27066-RA YP_005058337.1 KEGG: tfu:Tfu_2239 hypothetical protein YP_005058338.1 KEGG: ele:Elen_1397 filamentation induced by cAMP protein Fic YP_005058339.1 KEGG: dbr:Deba_2389 electron transfer flavoprotein alpha/beta-subunit YP_005058340.1 KEGG: ach:Achl_4233 hypothetical protein YP_005058341.1 KEGG: mxa:MXAN_6728 zinc-binding dehydrogenase family oxidoreductase; PFAM: Alcohol dehydrogenase GroES-like YP_005058342.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS fold-3; KEGG: aca:ACP_2754 sensory transduction histidine kinase; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; PAS; PAC motif YP_005058343.1 KEGG: xcb:XC_1120 xylanase YP_005058344.1 KEGG: aba:Acid345_2372 ankyrin; PFAM: Ankyrin repeat; SMART: Ankyrin repeat YP_005058345.1 KEGG: aba:Acid345_3134 hypothetical protein YP_005058346.1 KEGG: aba:Acid345_3135 radical SAM family Fe-S protein; PFAM: Cobalamin (vitamin B12)-binding; Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005058347.1 TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: aba:Acid345_3136 undecaprenyl pyrophosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase-like YP_005058348.1 KEGG: aba:Acid345_3137 hypothetical protein YP_005058349.1 KEGG: aba:Acid345_3138 hypothetical protein YP_005058350.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_1406 outer membrane efflux protein YP_005058351.1 PFAM: Acriflavin resistance protein; KEGG: aba:Acid345_1699 acriflavin resistance protein YP_005058352.1 KEGG: aba:Acid345_1700 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005058353.1 KEGG: cpf:CPF_1153 magnesium-translocating P-type ATPase YP_005058354.1 KEGG: dac:Daci_3919 RND family efflux transporter MFP subunit YP_005058355.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Signal transduction response regulator, receiver domain; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; KEGG: aca:ACP_2711 pyridine nucleotide-disulphide oxidoreductase; SMART: Signal transduction response regulator, receiver domain YP_005058356.1 KEGG: aca:ACP_2712 two-component sensor histidine kinase all1088; PFAM: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain; SMART: ATPase-like, ATP-binding domain; Cyclic nucleotide-binding domain YP_005058357.1 PFAM: Glycoside hydrolase, family 43; KEGG: bth:BT_3516 arabinan endo-1,5-alpha-L-arabinosidase A precursor YP_005058358.1 PFAM: 2-nitropropane dioxygenase, NPD; KEGG: aca:ACP_0446 oxidoreductase, 2-nitropropane dioxygenase family YP_005058359.1 PFAM: Peptidase S41; WD40-like Beta Propeller; KEGG: fbc:FB2170_01836 protease, putative YP_005058360.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_0014 outer membrane efflux protein YP_005058361.1 KEGG: aca:ACP_0013 hypothetical protein YP_005058362.1 PFAM: Secretion protein HlyD; KEGG: aca:ACP_0012 multidrug resistance protein MdtN YP_005058363.1 PFAM: Fusaric acid resistance protein, conserved region; KEGG: aca:ACP_0011 fusaric acid resistance domain protein YP_005058364.1 KEGG: xfn:XfasM23_1192 putative phage repressor; PFAM: Peptidase S24/S26A/S26B, conserved region; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005058365.1 manually curated; PFAM: Signal transduction response regulator, C-terminal; KEGG: rle:RL2429 putative adenylate cyclase; SMART: Signal transduction response regulator, C-terminal YP_005058366.1 KEGG: sus:Acid_4774 hypothetical protein YP_005058367.1 KEGG: aca:ACP_1365 hypothetical protein YP_005058368.1 KEGG: aca:ACP_1367 hypothetical protein YP_005058369.1 KEGG: aca:ACP_2982 putative tyrosine recombinase XerC; HAMAP: Tyrosine recombinase xerC; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage YP_005058370.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: aca:ACP_2981 putative tyrosine recombinase XerD YP_005058371.1 TIGRFAM: Signal recognition particle, SRP; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, M-domain; Signal recognition particle, SRP54 subunit, helical bundle; KEGG: aca:ACP_3161 signal recognition particle protein; SMART: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; ATPase, AAA+ type, core YP_005058372.1 PFAM: Uncharacterised protein family UPF0175; KEGG: mar:MAE_06970 hypothetical protein YP_005058373.1 KEGG: cyt:cce_2872 hypothetical protein YP_005058374.1 PFAM: Carboxylesterase, type B; KEGG: swi:Swit_1619 carboxylesterase, type B YP_005058376.1 PFAM: Uncharacterised protein family UPF0324, prokaryote; KEGG: aba:Acid345_2376 hypothetical protein YP_005058377.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: aca:ACP_3041 hypothetical protein YP_005058378.1 KEGG: plm:Plim_2540 BioH protein, putative YP_005058379.1 KEGG: sus:Acid_5752 hypothetical protein YP_005058380.1 KEGG: aca:ACP_1037 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI) YP_005058381.1 TIGRFAM: Beta-ketoadipate transcriptional regulator, PcaR/PcaU/PobR; PFAM: Transcription regulator IclR, C-terminal; Transcription regulator IclR, N-terminal; KEGG: spe:Spro_2514 IclR family transcriptional regulator; SMART: Transcription regulator IclR, N-terminal YP_005058382.1 KEGG: aba:Acid345_4411 hypothetical protein YP_005058383.1 PFAM: Membrane bound O-acyl transferase, MBOAT; KEGG: aba:Acid345_4412 membrane bound O-acyl transferase, MBOAT YP_005058384.1 KEGG: aca:ACP_2785 putative phosphoglycolate phosphatase; PFAM: Haloacid dehalogenase-like hydrolase YP_005058385.1 KEGG: aba:Acid345_3530 hypothetical protein YP_005058386.1 KEGG: aca:ACP_0231 LexA repressor; TIGRFAM: Peptidase S24, LexA repressor; PFAM: LexA, DNA-binding domain; Peptidase S24/S26A/S26B, conserved region YP_005058387.1 KEGG: aca:ACP_0146 dienelactone hydrolase family protein; PFAM: Dienelactone hydrolase YP_005058388.1 KEGG: aca:ACP_0148 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; PFAM: Ribosomal protein S15 YP_005058389.1 KEGG: ssl:SS1G_09714 hypothetical protein YP_005058390.1 SMART: RNA-binding domain, S1; K Homology; TIGRFAM: Polyribonucleotide nucleotidyltransferase; KEGG: aca:ACP_0149 polynucleotide phosphorylase/polyadenylase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Ribosomal protein S1, RNA-binding domain; K Homology, type 1, subgroup; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type YP_005058391.1 KEGG: mjl:Mjls_2602 hypothetical protein YP_005058392.1 KEGG: cya:CYA_0302 hypothetical protein YP_005058393.1 KEGG: aca:ACP_0151 hypothetical protein YP_005058394.1 KEGG: aba:Acid345_2354 hypothetical protein YP_005058395.1 PFAM: ROK; KEGG: rce:RC1_0837 ROK family protein YP_005058396.1 KEGG: aca:ACP_2500 hypothetical protein; PFAM: Peptidase S53, propeptide; SMART: Peptidase S53, propeptide YP_005058397.1 KEGG: aca:ACP_1302 putative transcriptional regulatory protein; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal YP_005058398.1 PFAM: MgtC/SapB transporter; KEGG: apt:APA01_15670 cation transporter MgtC/SapB YP_005058399.1 KEGG: rer:RER_12650 hypothetical protein YP_005058400.1 PFAM: Glycosyl transferase, family 2; KEGG: cms:CMS_1024 putative glycosyl transferase YP_005058401.1 PFAM: Nodulation protein S, NodS-related; KEGG: gvi:glr3050 methyltransferase YP_005058402.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: nml:Namu_3271 LmbE family protein YP_005058403.1 PFAM: Protein of unknown function DUF3309; KEGG: aca:ACP_3086 hypothetical protein YP_005058404.1 KEGG: aca:ACP_2822 nonpeptidase homolog, peptidase S53 family; PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; SMART: Peptidase S53, propeptide YP_005058405.1 TIGRFAM: Gloeobacter/Verrucomicrobia repeat; PFAM: Putative Ig; KEGG: aca:ACP_1301 Ig domain protein; SMART: Bacterial Ig-like, group 2 YP_005058406.1 KEGG: sus:Acid_2471 serine/threonine protein kinase; PFAM: Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat YP_005058407.1 KEGG: aca:ACP_1288 hypothetical protein YP_005058408.1 PFAM: Metallo-dependent phosphatase; KEGG: sus:Acid_5668 metallophosphoesterase YP_005058409.1 KEGG: aca:ACP_1287 TonB-dependent receptor; manually curated; PFAM: TonB-dependent receptor, plug; Collagen-binding surface protein Cna-like, B-type domain YP_005058410.1 KEGG: aca:ACP_1286 hypothetical protein YP_005058411.1 PFAM: Sulphate transporter; Sulphate transporter/antisigma-factor antagonist STAS; KEGG: aca:ACP_1851 inorganic anion transporter, SulP family YP_005058412.1 PFAM: Mechanosensitive ion channel MscS; KEGG: aca:ACP_2930 transporter, MscS family YP_005058413.1 KEGG: mxa:MXAN_6161 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR; SMART: UbiC transcription regulator-associated; HTH transcriptional regulator, GntR YP_005058414.1 KEGG: phe:Phep_3349 chromate transporter, chromate ion transporter (CHR) family; TIGRFAM: Chromate transporter, long chain; PFAM: Chromate transporter YP_005058415.1 KEGG: aba:Acid345_0428 hypothetical protein; manually curated; PFAM: TonB-dependent receptor, plug YP_005058416.1 KEGG: mva:Mvan_5354 phosphoglycerate mutase; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1 YP_005058417.1 PFAM: Cobalt transporter subunit CbtB, putative; KEGG: bxe:Bxe_B2601 hypothetical protein YP_005058418.1 KEGG: bgl:bglu_2g19310 hypothetical protein YP_005058419.1 TIGRFAM: Cobaltochelatase, CobN subunit; KEGG: ddr:Deide_2p01670 putative cobaltochelatase, CobN subunit (hydrogenobyrinic acid a,c-diamide cobaltochelatase); PFAM: CobN/magnesium chelatase YP_005058420.1 PFAM: ATPase, AAA-5; von Willebrand factor, type A; KEGG: cvi:CV_1570 chelatase protein; SMART: von Willebrand factor, type A; ATPase, AAA+ type, core YP_005058421.1 KEGG: dol:Dole_1229 adenosylcobinamide-phosphate guanylyltransferase; PFAM: Cobinamide kinase/cobinamide phosphate guanyltransferase YP_005058422.1 TIGRFAM: Cobyrinic acid a,c-diamide synthase CbiA; HAMAP: Cobyrinic acid a,c-diamide synthase CbiA; KEGG: dau:Daud_1850 cobyrinic acid a,c-diamide synthase; PFAM: CobB/CobQ-like glutamine amidotransferase; Cobyrinic acid a,c-diamide synthase YP_005058423.1 TIGRFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase, prokaryotic; KEGG: glo:Glov_3678 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase-like YP_005058424.1 KEGG: bpy:Bphyt_0999 cobalamin synthase; TIGRFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase; PFAM: Cobalamin (vitamin B12) biosynthesis CobS, cobalamin-5-phosphate synthase YP_005058425.1 KEGG: hmo:HM1_2405 phosphoglycerate mutase domain protein; PFAM: Histidine phosphatase superfamily, clade-1; SMART: Histidine phosphatase superfamily, clade-1 YP_005058426.1 KEGG: mno:Mnod_8165 hypothetical protein YP_005058427.1 KEGG: fba:FIC_02267 Cob(I)alamin adenosyltransferase PduO; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type YP_005058428.1 TIGRFAM: Cob(II)yrinic acid a,c-diamide reductase; KEGG: mgm:Mmc1_1683 cob(II)yrinic acid a,c-diamide reductase; PFAM: Nitroreductase-like YP_005058429.1 TIGRFAM: Cobyric acid synthase CobQ; HAMAP: Cobyric acid synthase CobQ; KEGG: dae:Dtox_3093 cobyric acid synthase; PFAM: Cobyrinic acid a,c-diamide synthase; CobB/CobQ-like glutamine amidotransferase YP_005058430.1 TIGRFAM: Cobalamin biosynthesis CobD/CbiB; HAMAP: Cobalamin biosynthesis CobD/CbiB; KEGG: gur:Gura_0042 cobalamin biosynthesis protein CobD; PFAM: Cobalamin biosynthesis CobD/CbiB YP_005058431.1 PFAM: Aminotransferase, class I/classII; KEGG: gme:Gmet_0487 L-threonine O-3-phosphate decarboxylase YP_005058432.1 KEGG: gem:GM21_0119 ribonuclease BN; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related YP_005058433.1 KEGG: mrd:Mrad2831_3057 hypothetical protein YP_005058434.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_2933 transcriptional regulatory protein YP_005058435.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: sus:Acid_6734 putative oxidoreductase YP_005058436.1 PFAM: Ribosomal protein S1, RNA-binding domain; KEGG: sus:Acid_1915 SSU ribosomal protein S1P YP_005058437.1 KEGG: aca:ACP_2822 nonpeptidase homolog, peptidase S53 family; PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; SMART: Peptidase S53, propeptide YP_005058438.1 KEGG: cak:Caul_0623 hypothetical protein YP_005058439.1 KEGG: aba:Acid345_3749 putative signal transduction histidine kinase; PFAM: Two component regulator three Y; Two component regulator propeller; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005058440.1 KEGG: aba:Acid345_2443 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005058441.1 KEGG: aba:Acid345_3980 TPR repeat-containing serine/threonin protein kinase; PFAM: Signal transduction response regulator, C-terminal; Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat YP_005058442.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0549 hypothetical protein YP_005058443.1 KEGG: gvi:glr0080 putative alpha-mannosidase; PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, central domain; Glycoside hydrolase, family 38, core; SMART: Glycoside hydrolase, family 38, central domain YP_005058444.1 PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; KEGG: cai:Caci_3376 peptidase S53 propeptide; SMART: Peptidase S53, propeptide YP_005058445.1 KEGG: ami:Amir_3849 alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005058446.1 PFAM: Dienelactone hydrolase; KEGG: rmr:Rmar_0409 phospholipase/carboxylesterase YP_005058447.1 PFAM: Sulphatase-modifying factor; KEGG: sus:Acid_3984 hypothetical protein YP_005058448.1 KEGG: chl:Chy400_1863 ribokinase; PFAM: Carbohydrate/purine kinase YP_005058449.1 KEGG: sli:Slin_2647 putative integral membrane protein; putative sugar permease YP_005058450.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aba:Acid345_0663 TonB-dependent receptor YP_005058451.1 KEGG: dth:DICTH_1600 transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005058452.1 KEGG: reu:Reut_B4961 IclR family transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; Transcription regulator IclR, C-terminal; SMART: Transcription regulator IclR, N-terminal YP_005058453.1 PFAM: 2-hydroxycarboxylate transporter; KEGG: mrd:Mrad2831_4129 citrate carrier protein YP_005058454.1 KEGG: bur:Bcep18194_B1719 L-carnitine dehydratase/bile acid-inducible protein F; PFAM: CoA-transferase family III YP_005058455.1 KEGG: vap:Vapar_3898 citrate (pro-3S)-lyase; PFAM: Aldehyde-lyase domain YP_005058456.1 KEGG: aba:Acid345_0459 peptidase S8/S53 subtilisin kexin sedolisin; PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; SMART: Peptidase S53, propeptide YP_005058457.1 PFAM: FG-GAP; KEGG: aba:Acid345_0460 integrin-like protein YP_005058458.1 KEGG: sus:Acid_3814 TPR repeat-containing serine/threonin protein kinase; PFAM: Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, C-terminal; Tetratricopeptide repeat YP_005058459.1 PFAM: Protein of unknown function DUF1801; KEGG: sus:Acid_3039 hypothetical protein YP_005058460.1 KEGG: bmd:BMD_2327 alcohol dehydrogenase GroES-like domain/oxidoreductase, zinc-binding dehydrogenase family protein; PFAM: Alcohol dehydrogenase, C-terminal; Alcohol dehydrogenase GroES-like YP_005058461.1 KEGG: kfl:Kfla_4161 alpha/beta hydrolase fold protein; PFAM: Alpha/beta hydrolase fold-1 YP_005058462.1 KEGG: slo:Shew_2450 hypothetical protein YP_005058463.1 KEGG: pzu:PHZ_c0847 hypothetical protein YP_005058464.1 KEGG: bfu:BC1G_12229 hypothetical protein YP_005058465.1 KEGG: dan:Dana_GF17870 GF17870 gene product from transcript GF17870-RA YP_005058466.1 PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_3909 TonB-dependent receptor YP_005058467.1 KEGG: aca:ACP_3399 hypothetical protein YP_005058468.1 KEGG: aca:ACP_1929 hypothetical protein YP_005058469.1 KEGG: sus:Acid_4657 Ig domain-containing protein YP_005058470.1 KEGG: sus:Acid_0138 hypothetical protein YP_005058471.1 KEGG: sus:Acid_0137 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005058472.1 KEGG: dac:Daci_5804 cell surface receptor IPT/TIG domain-containing protein; PFAM: Cell surface receptor IPT/TIG; SMART: Cell surface receptor IPT/TIG YP_005058473.1 KEGG: ssl:SS1G_08263 hypothetical protein YP_005058474.1 KEGG: ami:Amir_0776 peptidase S15 YP_005058475.1 KEGG: bwe:BcerKBAB4_5389 YVTN beta-propeller repeat-containing protein YP_005058476.1 manually curated; KEGG: mmi:MMAR_4261 hypothetical protein YP_005058477.1 PFAM: Cupin 2, conserved barrel; KEGG: sus:Acid_7737 cupin 2 domain-containing protein YP_005058480.1 KEGG: gym:GYMC10_2959 hypothetical protein YP_005058481.1 KEGG: aca:ACP_0548 putative alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005058482.1 PFAM: TonB-dependent receptor, plug; KEGG: aba:Acid345_2388 Cna B-type protein YP_005058483.1 KEGG: sus:Acid_4622 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1 YP_005058484.1 PFAM: Glycoside hydrolase, family 76; KEGG: ssl:SS1G_12937 hypothetical protein YP_005058485.1 KEGG: ddi:DDB_G0272242 cup family protein YP_005058486.1 PFAM: Metallo-dependent phosphatase; KEGG: dfe:Dfer_4802 metallophosphoesterase YP_005058487.1 PFAM: Protein of unknown function DUF3223; KEGG: bja:bll1929 hypothetical protein YP_005058488.1 KEGG: cpi:Cpin_6217 TonB-dependent receptor YP_005058490.1 KEGG: aca:ACP_3182 conjugative relaxase domain protein; TIGRFAM: Conjugative relaxase, N-terminal; PFAM: TrwC relaxase YP_005058491.1 PFAM: Type IV secretion system, TraD, DNA-binding domain; KEGG: aca:ACP_1194 hypothetical protein YP_005058492.1 KEGG: aca:ACP_0658 hypothetical protein YP_005058493.1 KEGG: aca:ACP_3216 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005058494.1 PFAM: Anti-sigma K factor RskA; KEGG: aca:ACP_3218 hypothetical protein YP_005058495.1 PFAM: Integrase, catalytic core, phage; KEGG: pol:Bpro_0712 phage integrase YP_005058496.1 PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; KEGG: afr:AFE_2397 site-specific recombinase, phage integrase family YP_005058497.1 KEGG: mac:MA0763 hypothetical protein YP_005058498.1 PFAM: Protein of unknown function DUF159; KEGG: aca:ACP_3200 hypothetical protein YP_005058499.1 PFAM: DNA recombination and repair protein RecA; KEGG: aca:ACP_3199 hypothetical protein YP_005058500.1 manually curated; KEGG: aca:ACP_3198 hypothetical protein YP_005058501.1 SMART: Polymerase/histidinol phosphatase, N-terminal; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: aca:ACP_3197 DNA polymerase III, alpha subunit; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal YP_005058503.1 KEGG: rba:RB11416 hypothetical protein YP_005058504.1 KEGG: rba:RB11415 hypothetical protein YP_005058505.1 PFAM: Restriction endonuclease, type I, S subunit, EcoBI; KEGG: app:CAP2UW1_0883 restriction endonuclease S subunits-like protein YP_005058506.1 PFAM: DNA methylase, adenine-specific; N6 adenine-specific DNA methyltransferase, N12 class, N-terminal; KEGG: psl:Psta_4442 N-6 DNA methylase YP_005058507.1 PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Protein of unknown function DUF3559; Helicase, C-terminal; Restriction endonuclease, type I, EcoRI, R subunit/Type III, Res subunit, N-terminal; KEGG: psl:Psta_4443 type III restriction protein res subunit; SMART: DEAD-like helicase, N-terminal YP_005058508.1 PFAM: Integrase, catalytic core, phage; KEGG: mmr:Mmar10_2345 putative site-specific recombinase, phage integrase family protein YP_005058509.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: aba:Acid345_2691 lytic transglycosylase, catalytic YP_005058510.1 KEGG: aca:ACP_3529 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005058511.1 KEGG: aca:ACP_3528 hypothetical protein YP_005058512.1 KEGG: aca:ACP_0518 hypothetical protein YP_005058513.1 TIGRFAM: Formiminotransferase catalytic domain; KEGG: aca:ACP_0519 glutamate formimidoyltransferase; PFAM: Formiminotransferase, N-terminal subdomain; Formiminotransferase, C-terminal subdomain YP_005058514.1 PFAM: Lipid A 3-O-deacylase-related; KEGG: aca:ACP_0520 hypothetical protein YP_005058515.1 KEGG: aca:ACP_0521 hypothetical protein; TIGRFAM: Protein of unknown function DUF28; PFAM: Protein of unknown function DUF28 YP_005058516.1 PFAM: CopG-like DNA-binding; KEGG: plu:plu2305 hypothetical protein YP_005058517.1 PFAM: Plasmid stabilisation system; KEGG: plu:plu2306 hypothetical protein YP_005058518.1 TIGRFAM: Diaminopimelate decarboxylase; KEGG: aca:ACP_0222 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2, N-terminal; Orn/DAP/Arg decarboxylase 2, C-terminal YP_005058519.1 PFAM: Phage shock domain; KEGG: aca:ACP_0220 two-component system, sensory transduction histidine kinase YP_005058520.1 KEGG: aca:ACP_0219 hypothetical protein YP_005058521.1 KEGG: aba:Acid345_3205 hypothetical protein YP_005058522.1 KEGG: aca:ACP_2783 hypothetical protein YP_005058523.1 KEGG: aca:ACP_2777 hypothetical protein YP_005058524.1 TIGRFAM: VWFA-related, acidobacterial-type; PFAM: von Willebrand factor, type A; KEGG: aca:ACP_2773 hypothetical protein; SMART: von Willebrand factor, type A YP_005058525.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aca:ACP_2768 lipoprotein releasing system, transmembrane protein, LolC/E family YP_005058526.1 KEGG: glo:Glov_3116 transposase IS4 family protein YP_005058527.1 PFAM: ABC transporter-like; KEGG: aca:ACP_2766 lipoprotein-releasing system, ATP-binding protein LolD; SMART: ATPase, AAA+ type, core YP_005058528.1 KEGG: ote:Oter_4281 pectate lyase YP_005058529.1 PFAM: Peptidase M23; KEGG: pzu:PHZ_c0370 peptidase YP_005058530.1 PFAM: Beta-lactamase-related; KEGG: kko:Kkor_1240 beta-lactamase YP_005058531.1 KEGG: aca:ACP_2765 ATP-dependent Clp protease, ATP-binding subunit ClpC; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core YP_005058532.1 KEGG: ote:Oter_3738 cupin 2 domain-containing protein; manually curated; PFAM: Cupin 2, conserved barrel YP_005058533.1 KEGG: aca:ACP_2764 putative lipoprotein YP_005058534.1 PFAM: Uracil-DNA glycosylase-like; KEGG: aba:Acid345_1564 uracil-DNA glycosylase superfamily protein YP_005058535.1 PFAM: Aldose 1-epimerase; KEGG: aca:ACP_0795 aldose epimerase family YP_005058536.1 TIGRFAM: Trigger factor; HAMAP: Trigger factor; KEGG: aca:ACP_3434 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial YP_005058537.1 KEGG: aca:ACP_3433 ATP-dependent Clp protease, proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP YP_005058538.1 TIGRFAM: Clp protease, ATP-binding subunit ClpX; PFAM: ATPase, AAA-2; Clp ATPase, C-terminal; Zinc finger, C4-type; KEGG: aca:ACP_3432 ATP-dependent protease ATP-binding subunit ClpX; SMART: ATPase, AAA+ type, core YP_005058539.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: aca:ACP_3431 endopeptidase La; PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core YP_005058540.1 KEGG: bid:Bind_3236 hypothetical protein YP_005058541.1 KEGG: aca:ACP_3391 aminotransferase, classes I and II family protein; PFAM: Aminotransferase, class I/classII YP_005058542.1 TIGRFAM: Protein of unknown function DUF3738; KEGG: sus:Acid_3264 hypothetical protein YP_005058543.1 PFAM: ThiamineS; KEGG: aca:ACP_3390 ThiS domain protein YP_005058544.1 TIGRFAM: Threonine synthase; KEGG: aca:ACP_3389 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005058545.1 PFAM: Putative esterase; KEGG: sli:Slin_1343 hypothetical protein YP_005058546.1 PFAM: Cytochrome c-type biogenesis protein CcmB; KEGG: aca:ACP_2759 putative heme exporter protein CcmB YP_005058547.1 PFAM: Cytochrome c assembly protein; KEGG: aca:ACP_2756 putative heme exporter protein C YP_005058549.1 KEGG: aca:ACP_2752 beta-propeller repeat protein, YVTN family; TIGRFAM: YVTN beta-propeller repeat; PFAM: Lactonase, 7-bladed beta propeller YP_005058550.1 KEGG: aca:ACP_3119 YihY family protein; TIGRFAM: Ribonuclease BN; PFAM: Ribonuclease BN-related YP_005058551.1 PFAM: Domain of unknown function DUF1730; KEGG: aca:ACP_3117 putative iron-sulfur cluster binding protein YP_005058552.1 PFAM: Zinc/iron permease; KEGG: sna:Snas_1529 zinc/iron permease YP_005058553.1 KEGG: sus:Acid_1746 hypothetical protein YP_005058554.1 KEGG: ssm:Spirs_0285 heat shock protein HSP90; PFAM: Heat shock protein Hsp90, C-terminal; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005058555.1 KEGG: sus:Acid_1173 alpha/beta hydrolase YP_005058556.1 manually curated; TIGRFAM: UDP-glycosyltransferase, MGT; KEGG: mar:MAE_05250 glycosyl transferase; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyl transferase, family 28 YP_005058557.1 PFAM: Integrase, catalytic core; KEGG: rpf:Rpic12D_3165 integrase catalytic region YP_005058558.1 KEGG: sus:Acid_1827 hypothetical protein YP_005058559.1 KEGG: sus:Acid_6854 Cna B-type protein YP_005058560.1 PFAM: Type I phosphodiesterase/nucleotide pyrophosphatase/phosphate transferase; KEGG: sus:Acid_3473 type I phosphodiesterase/nucleotide pyrophosphatase YP_005058561.1 KEGG: bvi:Bcep1808_3846 putative 3-hydroxyphenylpropionic transporter MhpT YP_005058562.1 KEGG: pic:PICST_32265 hypothetical protein YP_005058563.1 TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; KEGG: scl:sce7733 methionine synthase; PFAM: Vitamin B12-dependent methionine synthase, activation domain; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Pterin-binding YP_005058564.1 KEGG: scl:sce7733 methionine synthase; PFAM: Homocysteine S-methyltransferase YP_005058565.1 PFAM: Protein of unknown function DUF763; KEGG: sus:Acid_7730 hypothetical protein YP_005058566.1 KEGG: aca:ACP_0214 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like YP_005058567.1 KEGG: dgr:Dgri_GH22854 GH22854 gene product from transcript GH22854-RA YP_005058568.1 KEGG: sme:SM_b20988 hypothetical protein; manually curated; PFAM: NUDIX hydrolase domain YP_005058569.1 KEGG: aca:ACP_0549 hypothetical protein YP_005058570.1 KEGG: dfe:Dfer_4742 alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005058571.1 KEGG: aca:ACP_0728 hypothetical protein YP_005058572.1 manually curated; KEGG: ngr:NAEGRDRAFT_46022 hypothetical protein YP_005058573.1 KEGG: rpe:RPE_2652 filamentous haemagglutinin outer membrane protein YP_005058574.1 KEGG: adg:Adeg_0451 glycogen/starch synthase, ADP-glucose type YP_005058575.1 KEGG: mbr:MONBRDRAFT_33819 hypothetical protein YP_005058576.1 KEGG: sus:Acid_3977 hypothetical protein YP_005058577.1 KEGG: aca:ACP_2429 glycosyl hydrolase, family 2; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, TIM barrel YP_005058578.1 KEGG: sus:Acid_3714 hypothetical protein YP_005058579.1 PFAM: Glycosyl transferase, family 28; KEGG: cyc:PCC7424_4779 glycosyl transferase family 28 YP_005058580.1 PFAM: Uncharacterised protein family UPF0061; KEGG: mno:Mnod_4843 protein of unknown function UPF0061 YP_005058581.1 KEGG: pai:PAE3454 pullulanase YP_005058582.1 KEGG: mau:Micau_3365 glycoside hydrolase family 16 protein; PFAM: Glycoside hydrolase, family 16; Ricin B lectin; SMART: Ricin B lectin YP_005058583.1 KEGG: aca:ACP_0561 hypothetical protein YP_005058584.1 KEGG: dfe:Dfer_2051 sulfatase; PFAM: Sulfatase YP_005058585.1 PFAM: Terpene synthase, metal-binding domain; KEGG: rca:Rcas_0622 terpene synthase metal-binding domain-containing protein YP_005058586.1 KEGG: aba:Acid345_4155 transcriptional regulatory protein-like; PFAM: Signal transduction response regulator, C-terminal; WD40-like Beta Propeller; SMART: Signal transduction response regulator, C-terminal YP_005058587.1 PFAM: Metallo-dependent phosphatase; KEGG: gdi:GDI_1164 hypothetical protein YP_005058588.1 KEGG: sus:Acid_1189 Cna B domain-containing protein YP_005058589.1 KEGG: cpi:Cpin_5894 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D YP_005058590.1 KEGG: scl:sce4671 rhs element Vgr protein YP_005058591.1 KEGG: bpd:BURPS668_A1402 hypothetical protein YP_005058592.1 KEGG: bte:BTH_II1434 YD repeat-containing protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: RHS protein; YD repeat YP_005058593.1 KEGG: cpi:Cpin_5684 hypothetical protein YP_005058594.1 KEGG: bth:BT_0158 Na(+)/H(+) antiporter YP_005058595.1 SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: rso:RS05859 peptide synthetase protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding; Thioesterase YP_005058596.1 SMART: Polyketide synthase, phosphopantetheine-binding; TIGRFAM: Amino acid adenylation; KEGG: rso:RS05860 peptide synthetase protein; PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Condensation domain YP_005058597.1 KEGG: bbt:BBta_6814 arthrofactin synthetase/syringopeptin synthetase C-related non-ribosomal peptide synthetase module; TIGRFAM: Amino acid adenylation; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Phosphopantetheine-binding YP_005058598.1 PFAM: Aminotransferase, class IV; KEGG: bph:Bphy_2495 para-aminobenzoate synthase, subunit I YP_005058599.1 KEGG: kfl:Kfla_4134 para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal YP_005058600.1 TIGRFAM: Anthranilate synthase, glutamine amidotransferase domain; KEGG: plu:plu3563 hypothetical protein; PFAM: Glutamine amidotransferase class-I, C-terminal YP_005058601.1 SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase/Fatty acid synthase, KR; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase, acyl transferase domain; TIGRFAM: Amino acid adenylation; KEGG: bam:Bamb_6476 amino acid adenylation domain-containing protein; PFAM: AMP-dependent synthetase/ligase; Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; Polyketide synthase, KR; Phosphopantetheine-binding; Acyl transferase; Condensation domain YP_005058602.1 PFAM: AMP-dependent synthetase/ligase; Polyketide synthase, KR; Beta-ketoacyl synthase, C-terminal; Beta-ketoacyl synthase, N-terminal; Phosphopantetheine-binding; KEGG: bam:Bamb_6478 beta-ketoacyl synthase; SMART: Polyketide synthase, beta-ketoacyl synthase domain; Polyketide synthase, phosphopantetheine-binding; Polyketide synthase/Fatty acid synthase, KR YP_005058603.1 PFAM: Luciferase-like, subgroup; KEGG: bja:bll2235 hypothetical protein YP_005058604.1 TIGRFAM: Aspartate decarboxylase; KEGG: bph:Bphy_2198 aspartate alpha-decarboxylase; PFAM: Aspartate decarboxylase YP_005058605.1 TIGRFAM: Cyclic peptide transporter; PFAM: ABC transporter-like; KEGG: xbo:XBJ1_2154 ABC transport protein XpsD (fragment) (modular protein); SMART: ATPase, AAA+ type, core YP_005058606.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: fra:Francci3_1504 4'-phosphopantetheinyl transferase YP_005058607.1 manually curated; KEGG: mau:Micau_3884 oleoyl-(acyl-carrier-protein) hydrolase; PFAM: Thioesterase YP_005058608.1 KEGG: kra:Krad_0162 hypothetical protein YP_005058609.1 KEGG: aba:Acid345_1066 hypothetical protein YP_005058610.1 KEGG: sus:Acid_7414 hypothetical protein YP_005058611.1 KEGG: aca:ACP_3195 hypothetical protein YP_005058612.1 KEGG: aca:ACP_1222 hypothetical protein YP_005058614.1 KEGG: ncr:NCU09432 hypothetical protein YP_005058615.1 KEGG: aca:ACP_3165 hypothetical protein YP_005058616.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aca:ACP_3164 transcriptional regulator, LysR family YP_005058617.1 KEGG: acp:A2cp1_3427 DNA binding domain protein, excisionase family YP_005058618.1 TIGRFAM: Ketopantoate reductase ApbA/PanE; KEGG: ote:Oter_2165 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal YP_005058619.1 KEGG: tbi:Tbis_0484 hypothetical protein YP_005058620.1 KEGG: api:100162087 similar to putative GABA-B receptor 2 (AGAP004595-PA) YP_005058621.1 PFAM: Integrase, catalytic core, phage; KEGG: azl:AZL_018910 integrase YP_005058622.1 KEGG: swi:Swit_5324 hypothetical protein YP_005058623.1 KEGG: swi:Swit_5323 histidine kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005058624.1 PFAM: Phosphoadenosine phosphosulphate reductase; KEGG: swi:Swit_5329 phosphoadenosine phosphosulfate reductase YP_005058625.1 KEGG: swi:Swit_5327 hypothetical protein YP_005058626.1 TIGRFAM: DGQHR-containing domain; KEGG: fba:FIC_01228 hypothetical protein YP_005058627.1 KEGG: cfl:Cfla_1947 excinuclease ABC, C subunit YP_005058628.1 PFAM: Metallo-dependent phosphatase; KEGG: maq:Maqu_0200 metallophosphoesterase YP_005058629.1 KEGG: pvx:PVX_098880 transporter YP_005058630.1 PFAM: Integrase, catalytic core, phage; KEGG: dat:HRM2_20860 phage integrase protein (DNA breaking and rejoining enzyme) YP_005058631.1 TIGRFAM: Excisionase/Xis, DNA-binding; KEGG: nde:NIDE2278 hypothetical protein YP_005058632.1 PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain; KEGG: aca:ACP_1016 semialdehyde dehydrogenase, NAD binding domain protein YP_005058633.1 KEGG: aca:ACP_1017 CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_005058634.1 TIGRFAM: Phosphatidylserine decarboxylase-related protein; KEGG: aca:ACP_1018 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related YP_005058635.1 KEGG: aca:ACP_1020 acetyltransferase, GNAT family; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase (GNAT) domain YP_005058636.1 KEGG: aca:ACP_1021 peptidase family M22, nonpeptidase homolog; TIGRFAM: Conserved hypothetical protein CHP03725, YeaZ; PFAM: Peptidase M22, glycoprotease YP_005058637.1 PFAM: Protein of unknown function DUF488; KEGG: rcu:RCOM_1887540 hypothetical protein YP_005058639.1 SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; TIGRFAM: Peptidase S16, ATP-dependent protease La; KEGG: aca:ACP_0609 endopeptidase La; PFAM: Peptidase S16, Lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core YP_005058640.1 PFAM: Protein of unknown function DUF3467; KEGG: aca:ACP_3371 hypothetical protein YP_005058641.1 PFAM: GPI mannosyltransferase; KEGG: aca:ACP_3370 hypothetical protein YP_005058642.1 KEGG: cfl:Cfla_0316 chitin-binding domain 3 protein YP_005058643.1 KEGG: sus:Acid_4967 hypothetical protein YP_005058644.1 KEGG: psl:Psta_1905 PepSY-associated TM helix domain protein YP_005058645.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aba:Acid345_2315 GCN5-related N-acetyltransferase YP_005058646.1 PFAM: Vancomycin resistance VanW; KEGG: bbe:BBR47_06840 hypothetical protein YP_005058647.1 TIGRFAM: FO synthase, subunit 2; Menaquinone biosynthesis, SCO4494, predicted; PFAM: Radical SAM; KEGG: aca:ACP_0913 conserved hypothetical protein TIGR00423; SMART: Elongator protein 3/MiaB/NifB YP_005058648.1 KEGG: aca:ACP_0916 BNR/Asp-box repeat domain/two component regulator propeller YP_005058649.1 KEGG: aba:Acid345_3272 hypothetical protein YP_005058650.1 SMART: PKD/Chitinase domain; KEGG: aba:Acid345_3272 hypothetical protein YP_005058651.1 TIGRFAM: NADH-ubiquinone oxidoreductase, 20 Kd subunit; KEGG: aca:ACP_0918 NADH dehydrogenase subunit B; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit YP_005058653.1 PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Metal-dependent phosphohydrolase, HD subdomain; Amino acid-binding ACT; KEGG: aca:ACP_0921 protein-P-II uridylyltransferase, putative; SMART: Metal-dependent phosphohydrolase, HD domain YP_005058654.1 KEGG: aca:ACP_0920 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII YP_005058655.1 KEGG: aba:Acid345_1490 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter YP_005058656.1 PFAM: Cupin 2, conserved barrel; KEGG: aca:ACP_3396 cupin domain protein YP_005058657.1 KEGG: aba:Acid345_2841 N-acetylneuraminate synthase; PFAM: N-acetylneuraminic acid synthase, N-terminal YP_005058658.1 PFAM: HAD superfamily hydrolase-like, type 3; KEGG: sus:Acid_2245 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_005058659.1 KEGG: sus:Acid_2243 thiamine pyrophosphate binding domain-containing protein; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Thiamine pyrophosphate enzyme, central domain YP_005058660.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: aba:Acid345_2848 xylose isomerase-like TIM barrel YP_005058661.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cts:Ctha_2576 short-chain dehydrogenase/reductase SDR YP_005058662.1 KEGG: hne:HNE_2754 NAD dependent epimerase/dehydratase family protein; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058663.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: aba:Acid345_0796 short-chain dehydrogenase/reductase SDR; SMART: Polyketide synthase/Fatty acid synthase, KR YP_005058664.1 KEGG: sus:Acid_2240 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058665.1 PFAM: GtrA-like protein; KEGG: cpc:Cpar_1458 hypothetical protein YP_005058666.1 PFAM: Glycosyl transferase, family 2; KEGG: aba:Acid345_2849 glycosyl transferase family protein YP_005058667.1 PFAM: Sugar isomerase (SIS); KEGG: cac:CA_C3054 phosphoheptose isomerase YP_005058668.1 PFAM: Ankyrin repeat; KEGG: csa:Csal_3164 ankyrin YP_005058669.1 KEGG: aba:Acid345_3250 beta and gamma crystallin YP_005058670.1 PFAM: Major facilitator superfamily, enterobactin exporter EntS; KEGG: aca:ACP_0147 transporter, major facilitator family YP_005058671.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_2247 NAD-dependent epimerase/dehydratase YP_005058672.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; KEGG: sus:Acid_2248 DegT/DnrJ/EryC1/StrS aminotransferase YP_005058673.1 TIGRFAM: Glucose-1-phosphate cytidylyltransferase; KEGG: slt:Slit_2899 glucose-1-phosphate cytidylyltransferase; PFAM: Nucleotidyl transferase YP_005058674.1 TIGRFAM: CDP-glucose 4,6-dehydratase; KEGG: eca:ECA1423 CDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_005058675.1 TIGRFAM: Glycogen debranching enzyme; KEGG: sti:Sthe_2691 glycogen debranching enzyme GlgX; PFAM: Glycosyl hydrolase, family 13, catalytic domain; Glycoside hydrolase, family 13, N-terminal YP_005058676.1 KEGG: aca:ACP_2964 ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related YP_005058677.1 manually curated; KEGG: aca:ACP_0705 putative myo-inositol-1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo-inositol-1-phosphate synthase, GAPDH-like YP_005058678.1 KEGG: bph:Bphy_2276 hypothetical protein YP_005058679.1 manually curated; KEGG: aba:Acid345_2119 hypothetical protein YP_005058680.1 KEGG: aba:Acid345_3490 hypothetical protein YP_005058681.1 KEGG: aca:ACP_2462 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; PFAM: Flavoprotein YP_005058682.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mva:Mvan_4279 alpha/beta hydrolase fold YP_005058683.1 PFAM: Nitroreductase-like; KEGG: aca:ACP_2901 nitroreductase family protein YP_005058684.1 KEGG: aca:ACP_2900 hypothetical protein YP_005058685.1 KEGG: aca:ACP_2898 hypothetical protein YP_005058687.1 TIGRFAM: Excinuclease ABC, A subunit; PFAM: ABC transporter-like; KEGG: aca:ACP_2896 excinuclease ABC, A subunit; SMART: ATPase, AAA+ type, core YP_005058688.1 PFAM: Abortive infection protein; KEGG: aca:ACP_2895 protease, CAAX amino terminal family YP_005058689.1 KEGG: sus:Acid_1324 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005058690.1 KEGG: tpr:Tpau_4148 cysteine dioxygenase type I; PFAM: Cysteine dioxygenase type I; Rhodanese-like; SMART: Rhodanese-like YP_005058691.1 KEGG: mpr:MPER_06923 hypothetical protein YP_005058692.1 KEGG: cak:Caul_4845 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058693.1 KEGG: nde:NIDE2796 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC, N-terminal; HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005058694.1 KEGG: sus:Acid_4210 alpha-L-fucosidase; PFAM: Glycoside hydrolase, family 29; SMART: Glycoside hydrolase, family 29 YP_005058695.1 PFAM: Glycoside hydrolase, family 67, alpha glucuronidase, N-terminal; KEGG: cpi:Cpin_2251 coagulation factor 5/8 type domain protein YP_005058696.1 KEGG: ecv:APECO1_4271 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase YP_005058697.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: har:HEAR0063 putative glyoxalase/bleomycin resistance protein/dihydroxybiphenyl dioxygenase family protein YP_005058698.1 KEGG: bcl:ABC1420 hypothetical protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005058699.1 KEGG: sus:Acid_3264 hypothetical protein; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005058700.1 KEGG: mar:MAE_11730 hypothetical protein YP_005058701.1 KEGG: sus:Acid_5824 RluA family pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F YP_005058702.1 PFAM: DinB; KEGG: aba:Acid345_2760 hypothetical protein YP_005058703.1 KEGG: sus:Acid_5553 peptidase M56, BlaR1; TIGRFAM: Protein of unknown function DUF3738; PFAM: Protein of unknown function DUF3738 YP_005058704.1 PFAM: NADP oxidoreductase, coenzyme F420-dependent; KEGG: rhi:NGR_c30250 pyrroline-5-carboxylate reductase YP_005058705.1 PFAM: ThiJ/PfpI; KEGG: pmy:Pmen_1143 ThiJ/PfpI domain-containing protein YP_005058706.1 KEGG: bgf:BC1003_5602 NmrA family protein YP_005058707.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rlg:Rleg_4851 transcriptional regulator, LysR family YP_005058708.1 TIGRFAM: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; KEGG: aca:ACP_0311 methylthioribose-1-phosphate isomerase; PFAM: Initiation factor 2B-related YP_005058709.1 KEGG: xca:xccb100_4463 TonB-dependent outer membrane receptor precursor YP_005058710.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: aba:Acid345_4012 hypothetical protein YP_005058711.1 KEGG: aau:AAur_3988 putative permease YP_005058712.1 PFAM: Major facilitator superfamily MFS-1; KEGG: bur:Bcep18194_B2718 major facilitator transporter YP_005058713.1 KEGG: nde:NIDE1902 RNA polymerase sigma factor, sigma-70 family; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_005058714.1 TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; KEGG: aca:ACP_2842 methionine--tRNA ligase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding domain YP_005058715.1 PFAM: Cupin 2, conserved barrel; KEGG: sus:Acid_4750 cupin 2 domain-containing protein YP_005058716.1 PFAM: Cupin 2, conserved barrel; KEGG: ote:Oter_3738 cupin 2 domain-containing protein YP_005058717.1 KEGG: aba:Acid345_2029 TatD-related deoxyribonuclease; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; PFAM: Deoxyribonuclease, TatD-related YP_005058718.1 PFAM: Protein of unknown function DUF520; KEGG: aca:ACP_2840 putative nucleotide-binding protein YP_005058719.1 KEGG: aca:ACP_2839 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase YP_005058720.1 PFAM: Zeta toxin; KEGG: bpy:Bphyt_7291 hypothetical protein YP_005058722.1 KEGG: pap:PSPA7_1059 exodeoxyribonuclease VII small subunit; TIGRFAM: Exonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit YP_005058723.1 KEGG: aca:ACP_1004 bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase protein; PFAM: Homocysteine S-methyltransferase; Methylenetetrahydrofolate reductase YP_005058724.1 KEGG: aca:ACP_1003 hypothetical protein YP_005058725.1 PFAM: N-acetylglucosaminyl phosphatidylinositol deacetylase; KEGG: aca:ACP_1002 GlcNAc-PI de-N-acetylase family protein YP_005058726.1 KEGG: aca:ACP_3459 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; PFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase, non-repeat region YP_005058727.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; KEGG: aca:ACP_3458 lipid A biosynthesis acyltransferase YP_005058728.1 KEGG: aca:ACP_3457 hypothetical protein YP_005058729.1 PFAM: SNARE associated Golgi protein; KEGG: aca:ACP_0706 DedA family protein YP_005058730.1 PFAM: Chlorite dismutase; KEGG: nde:NIDE3081 chlorite dismutase YP_005058731.1 SMART: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; TIGRFAM: Endonuclease III/Nth; KEGG: aba:Acid345_1954 endonuclease III / DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain YP_005058732.1 PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; KEGG: sfu:Sfum_3201 uroporphyrin-III C-methyltransferase YP_005058733.1 KEGG: gvi:glr0080 putative alpha-mannosidase; PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, central domain; Glycoside hydrolase, family 38, core; SMART: Glycoside hydrolase, family 38, central domain YP_005058735.1 TIGRFAM: Deoxyribose-phosphate aldolase; KEGG: aca:ACP_3482 deoxyribose-phosphate aldolase; PFAM: Deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_005058736.1 PFAM: Aldehyde dehydrogenase domain; KEGG: aca:ACP_3483 aldehyde dehydrogenase (NAD) family protein YP_005058737.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: aca:ACP_1591 oxidoreductase, short chain dehydrogenase/reductase family YP_005058738.1 PFAM: Helix-turn-helix, HxlR type; KEGG: aca:ACP_1589 transcriptional regulatory protein YP_005058739.1 PFAM: ROK; KEGG: nwi:Nwi_1575 polyphosphate glucokinase YP_005058740.1 TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; KEGG: ank:AnaeK_1557 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005058741.1 KEGG: bba:Bd0798 hypothetical protein; PFAM: Catalase-related subgroup; Catalase-related immune responsive YP_005058742.1 PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-terminal domain; manually curated; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; KEGG: aca:ACP_0711 hydroxymethylbilane synthase; HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase YP_005058743.1 manually curated; KEGG: bja:blr1254 hypothetical protein YP_005058744.1 KEGG: aba:Acid345_2564 glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, dimerisation domain; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_005058745.1 PFAM: Cytochrome c assembly protein; KEGG: aca:ACP_0713 cytochrome c assembly protein YP_005058746.1 KEGG: aca:ACP_1145 hypothetical protein YP_005058747.1 TIGRFAM: DNA mismatch repair protein MutS, type 1; PFAM: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS-like, N-terminal; DNA mismatch repair protein MutS, connector; DNA mismatch repair protein MutS, core; DNA mismatch repair protein MutS, clamp; KEGG: aca:ACP_0716 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core YP_005058748.1 PFAM: Anhydro-N-acetylmuramic acid kinase; KEGG: aca:ACP_0718 anhydro-N-acetylmuramic acid kinase YP_005058749.1 PFAM: Bacterial extracellular solute-binding protein, family 5; KEGG: aca:ACP_0719 ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, periplasmic substrate-binding protein YP_005058750.1 KEGG: aca:ACP_0730 hypothetical protein YP_005058751.1 KEGG: sus:Acid_0138 hypothetical protein YP_005058752.1 KEGG: srm:SRM_02715 RNA polymerase sigma-E factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005058753.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005058754.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0729 putative lipoprotein YP_005058755.1 KEGG: aca:ACP_2182 pectin acetylesterase YP_005058756.1 KEGG: aca:ACP_0049 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D YP_005058757.1 PFAM: Glycoside hydrolase, family 28; KEGG: phe:Phep_3113 glycoside hydrolase family 28 YP_005058758.1 KEGG: cpf:CPF_0826 glycosy hydrolase family protein; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_005058759.1 KEGG: dfe:Dfer_4742 alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005058760.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: sus:Acid_1227 Cna B domain-containing protein YP_005058761.1 KEGG: sus:Acid_5935 periplasmic binding protein/LacI transcriptional regulator; PFAM: Transcription regulator IclR, N-terminal; SMART: Transcription regulator IclR, N-terminal YP_005058762.1 TIGRFAM: Mannonate dehydratase; KEGG: cko:CKO_00609 mannonate dehydratase; PFAM: Mannonate dehydratase YP_005058763.1 KEGG: sme:SMa0059 short chain alcohol dehydrogenase-related dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058764.1 PFAM: SMP-30/Gluconolaconase/LRE-like region; KEGG: bps:BPSS2074 senescence marker protein-30 (SMP-30) family protein YP_005058765.1 PFAM: NHL repeat; KEGG: cpi:Cpin_3272 NHL repeat containing protein YP_005058767.1 KEGG: sus:Acid_4186 hypothetical protein YP_005058768.1 manually curated; KEGG: psl:Psta_2514 alpha/beta hydrolase fold-3 domain protein YP_005058769.1 PFAM: Glycosyl hydrolases 38, C-terminal; Glycoside hydrolase, family 38, central domain; Glycoside hydrolase, family 38, core; KEGG: aba:Acid345_3122 glycosyl hydrolases 38-like; SMART: Glycoside hydrolase, family 38, central domain YP_005058770.1 PFAM: Multicopper oxidase, type 3; Multicopper oxidase, type 2; Multicopper oxidase, type 1; KEGG: sus:Acid_3062 multicopper oxidase, type 3 YP_005058771.1 KEGG: acr:Acry_2003 acid phosphatase; PFAM: Metallo-dependent phosphatase YP_005058772.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aca:ACP_0215 transcriptional regulator, LysR family YP_005058773.1 KEGG: psb:Psyr_4208 haem catalase/peroxidase; TIGRFAM: Catalase-peroxidase haem; PFAM: Haem peroxidase, plant/fungal/bacterial YP_005058774.1 TIGRFAM: Malonate decarboxylase, epsilon subunit; KEGG: rpc:RPC_4587 acyl transferase region; PFAM: Acyl transferase YP_005058775.1 KEGG: rpc:RPC_4588 phosphoribosyl-dephospho-CoA transferase; TIGRFAM: Holo-ACP synthase, malonate decarboxylase-specific; PFAM: Holo-ACP synthase, malonate decarboxylase-specific YP_005058776.1 PFAM: Auxin efflux carrier; KEGG: bja:bll0264 malonate decarboxylase subunit YP_005058777.1 KEGG: rpc:RPC_4589 malonate decarboxylase gamma subunit; TIGRFAM: Malonate decarboxylase gamma subunit; PFAM: Malonate decarboxylase gamma subunit YP_005058778.1 KEGG: bxe:Bxe_B1847 malonate decarboxylase subunit beta; TIGRFAM: Malonate decarboxylase, beta subunit; PFAM: Carboxyl transferase YP_005058779.1 KEGG: bph:Bphy_5085 malonate decarboxylase subunit delta; TIGRFAM: Malonate decarboxylase delta subunit; PFAM: Malonate decarboxylase delta subunit YP_005058780.1 TIGRFAM: Triphosphoribosyl-dephospho-CoA synthas, MdcB; KEGG: rpc:RPC_4592 triphosphoribosyl-dephospho-CoA synthase; PFAM: Triphosphoribosyl-dephospho-CoA protein YP_005058781.1 TIGRFAM: Malonate decarboxylase, alpha subunit; KEGG: bgf:BC1003_5655 malonate decarboxylase subunit alpha YP_005058782.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: rpc:RPC_4595 LysR family transcriptional regulator YP_005058783.1 KEGG: nhl:Nhal_2738 glycosyltransferase, MGT family; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyl transferase, family 28 YP_005058784.1 KEGG: sus:Acid_4762 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058785.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_2942 transcriptional regulator, TetR family YP_005058786.1 KEGG: bja:bll6252 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005058787.1 KEGG: sus:Acid_0211 hypothetical protein YP_005058788.1 KEGG: sus:Acid_0210 hypothetical protein YP_005058789.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_0067 putative Oar protein YP_005058790.1 PFAM: Glycoside hydrolase, family 35; KEGG: cse:Cseg_1823 beta-galactosidase YP_005058791.1 KEGG: xal:XALc_2226 putative alpha-L-fucosidase protein; PFAM: Glycoside hydrolase, family 29; Coagulation factor 5/8 type, C-terminal; SMART: Glycoside hydrolase, family 29 YP_005058792.1 PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal; KEGG: xal:XALc_2221 putative beta-glucosidase protein; SMART: PA14 YP_005058793.1 PFAM: Pyridoxal phosphate-dependent transferase; KEGG: sli:Slin_3968 L-seryl-tRNA(ser) selenium transferase protein YP_005058794.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: rso:RS02398 oxidoreductase protein YP_005058796.1 PFAM: Major facilitator superfamily MFS-1; KEGG: sjp:SJA_C2-01020 putative MFS permease YP_005058797.1 manually curated; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; Two component regulator three Y; KEGG: aca:ACP_2112 two component regulator propeller/histidine kinase domain protein; SMART: ATPase-like, ATP-binding domain YP_005058798.1 KEGG: aca:ACP_2113 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005058799.1 PFAM: Ribonuclease E inhibitor RraA/Dimethylmenaquinone methyltransferase; KEGG: sus:Acid_3345 dimethylmenaquinone methyltransferase YP_005058800.1 KEGG: cpi:Cpin_6463 selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein YP_005058801.1 PFAM: Amidohydrolase 1; KEGG: sus:Acid_6154 dihydroorotase YP_005058802.1 PFAM: Protein of unknown function DUF3299; KEGG: bba:Bd1108 hypothetical protein YP_005058803.1 PFAM: ABC transporter-like; KEGG: gau:GAU_0631 putative ABC transporter ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005058804.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: bba:Bd1112 peptide ABC transporter permease YP_005058805.1 PFAM: Endoribonuclease L-PSP; KEGG: dfe:Dfer_2445 endoribonuclease L-PSP YP_005058806.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6158 hypothetical protein YP_005058807.1 PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: rsc:RCFBP_21395 putative FAD linked oxidase oxidoreductase protein YP_005058808.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: rpi:Rpic_3701 6-phosphogluconolactonase YP_005058809.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: sus:Acid_7587 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_005058810.1 PFAM: Domain of unknown function DUF140; KEGG: rmr:Rmar_0705 protein of unknown function DUF140 YP_005058811.1 PFAM: ABC transporter-like; KEGG: drt:Dret_0677 ABC transporter related; SMART: ATPase, AAA+ type, core YP_005058812.1 PFAM: Mammalian cell entry-related; KEGG: phe:Phep_0795 mammalian cell entry related domain protein YP_005058813.1 PFAM: Glycoside hydrolase, family 35; KEGG: aca:ACP_0071 glycosyl hydrolase, family 35 YP_005058814.1 KEGG: bpy:Bphyt_0224 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058815.1 KEGG: cyc:PCC7424_0085 transcriptional regulator, AraC family; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005058816.1 KEGG: bld:BLi02843 hypothetical protein YP_005058817.1 PFAM: Cupin 2, conserved barrel; KEGG: gdj:Gdia_2532 cupin 2 conserved barrel domain protein YP_005058818.1 KEGG: sus:Acid_2907 NHL repeat-containing protein YP_005058819.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: sli:Slin_6541 aldo/keto reductase YP_005058820.1 KEGG: avn:Avin_33900 aldo/keto reductase with a twin-arginine translocation pathway signal; PFAM: NADP-dependent oxidoreductase domain YP_005058821.1 PFAM: Cupin 2, conserved barrel; KEGG: mea:Mex_1p0949 putative mannose-6-phosphate isomerase YP_005058822.1 PFAM: NIPSNAP; KEGG: sli:Slin_0535 NIPSNAP family containing protein YP_005058823.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: cti:RALTA_A0666 putative transcriptional regulator, TetR/AcrR family YP_005058824.1 TIGRFAM: XapX domain; KEGG: sus:Acid_1566 hypothetical protein YP_005058825.1 KEGG: gur:Gura_1272 MetA-pathway phenol degradation-like protein YP_005058826.1 PFAM: NADPH-dependent FMN reductase; KEGG: acr:Acry_2828 NADPH-dependent FMN reductase YP_005058827.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: sno:Snov_0418 transcriptional regulator, LysR family YP_005058828.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: cak:Caul_4611 xylose isomerase domain-containing protein YP_005058829.1 KEGG: chl:Chy400_0394 xylose isomerase domain protein TIM barrel; PFAM: Xylose isomerase, TIM barrel domain YP_005058830.1 KEGG: cce:Ccel_1239 carbohydrate binding family 6; PFAM: Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Glycoside hydrolase, family 2, TIM barrel YP_005058831.1 KEGG: iag:Igag_0510 hypothetical protein YP_005058832.1 KEGG: rba:RB3550 endo-1,4-beta-xylanase B YP_005058833.1 KEGG: hor:Hore_20490 beta-galactosidase; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_005058834.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aca:ACP_1966 glyoxalase family protein YP_005058835.1 KEGG: rle:RL1049 putative solute-binding component of ABC transporter YP_005058836.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aca:ACP_1900 MFS transporter, anion:cation symporter (ACS) family YP_005058837.1 KEGG: rsh:Rsph17029_0834 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058838.1 KEGG: sus:Acid_7535 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal YP_005058839.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_0867 putative lipoprotein YP_005058840.1 PFAM: Glycoside hydrolase, family 35; KEGG: ote:Oter_1364 beta-galactosidase YP_005058841.1 KEGG: aca:ACP_2113 two-component response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005058842.1 KEGG: sus:Acid_2684 histidine kinase; PFAM: ATPase-like, ATP-binding domain; Two component regulator three Y; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; Two component regulator propeller; SMART: ATPase-like, ATP-binding domain; Fibronectin, type III YP_005058843.1 KEGG: aca:ACP_1301 Ig domain protein; PFAM: Glycosyl hydrolase 53; Putative Ig; Ricin B lectin; SMART: Ricin B lectin YP_005058844.1 KEGG: aba:Acid345_2278 hypothetical protein; PFAM: Alpha/beta hydrolase fold-1 YP_005058845.1 PFAM: Protein of unknown function DUF1080; KEGG: tra:Trad_1254 protein of unknown function DUF1080 YP_005058846.1 PFAM: Protein of unknown function DUF1080; KEGG: cpi:Cpin_5826 protein of unknown function DUF1080 YP_005058847.1 KEGG: aca:ACP_2517 TolB domain protein; PFAM: Signal transduction response regulator, C-terminal; WD40-like Beta Propeller; SMART: Signal transduction response regulator, C-terminal YP_005058848.1 KEGG: hoh:Hoch_2510 two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core YP_005058849.1 KEGG: aba:Acid345_0662 parallel beta-helix repeat-containing protein YP_005058850.1 PFAM: UspA; KEGG: bav:BAV3184 universal stress protein YP_005058851.1 KEGG: rfr:Rfer_0702 undecaprenyl-phosphate galactosephosphotransferase; TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase YP_005058852.1 KEGG: aar:Acear_2127 DegT/DnrJ/EryC1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_005058853.1 KEGG: aca:ACP_1490 exopolysaccharide biosynthesis protein; PFAM: NAD-dependent epimerase/dehydratase YP_005058854.1 KEGG: pjd:Pjdr2_4167 NAD-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_005058855.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_4430 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_005058856.1 PFAM: Bacterial transferase hexapeptide repeat; KEGG: tnp:Tnap_0557 hexapaptide repeat-containing transferase YP_005058857.1 PFAM: Glycosyl transferase, family 2; KEGG: psl:Psta_1435 glycosyl transferase family 2 YP_005058858.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: aba:Acid345_2833 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation YP_005058859.1 PFAM: Oxidoreductase, N-terminal; KEGG: hoh:Hoch_0307 oxidoreductase domain protein YP_005058860.1 PFAM: Drug/metabolite transporter; KEGG: rca:Rcas_3972 hypothetical protein YP_005058861.1 PFAM: Drug/metabolite transporter; KEGG: psp:PSPPH_2807 hypothetical protein YP_005058862.1 PFAM: Amine oxidase; KEGG: psl:Psta_1439 FAD dependent oxidoreductase YP_005058864.1 PFAM: Polysaccharide deacetylase; KEGG: tin:Tint_1509 polysaccharide deacetylase YP_005058865.1 PFAM: Glycosyl transferase, group 1; KEGG: gme:Gmet_2001 glycosyl transferase, group 1 YP_005058866.1 PFAM: Glycosyl transferase, group 1; KEGG: cwo:Cwoe_0095 glycosyl transferase group 1 YP_005058867.1 PFAM: Polysaccharide export protein; Soluble ligand binding domain; KEGG: mxa:MXAN_3225 polysaccharide biosynthesis/export protein YP_005058868.1 KEGG: bpm:BURPS1710b_A1170 adhesin/hemolysin YP_005058869.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: dat:HRM2_19670 GumC1 YP_005058870.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: mxa:MXAN_1025 capsular exopolysaccharide family protein YP_005058871.1 KEGG: sus:Acid_6175 hypothetical protein YP_005058872.1 PFAM: Protein of unknown function DUF2079, membrane; KEGG: hau:Haur_4272 membrane protein-like protein YP_005058873.1 PFAM: Polysaccharide biosynthesis protein; KEGG: lch:Lcho_3073 polysaccharide biosynthesis protein YP_005058874.1 PFAM: O-antigen ligase-related; KEGG: gme:Gmet_2009 O-antigen polymerase YP_005058875.1 PFAM: Glycosyl transferase, group 1; KEGG: gme:Gmet_2004 glycosyl transferase, group 1 YP_005058876.1 PFAM: Glycosyl transferase, family 2; KEGG: gme:Gmet_2008 glycosyl transferase family protein YP_005058877.1 PFAM: Polysaccharide deacetylase; KEGG: tgr:Tgr7_2375 polysaccharide deacetylase YP_005058878.1 PFAM: Glycosyl transferase, group 1; KEGG: tbd:Tbd_0302 glycosyltransferase YP_005058879.1 KEGG: mms:mma_0640 serine O-acetyltransferase YP_005058880.1 KEGG: aba:Acid345_0662 parallel beta-helix repeat-containing protein YP_005058881.1 TIGRFAM: PAS; PFAM: PAS fold; KEGG: naz:Aazo_0288 multi-sensor signal transduction histidine kinase; SMART: PAC motif; PAS YP_005058882.1 KEGG: aba:Acid345_1498 Crp/FNR family transcriptional regulator; PFAM: Cyclic nucleotide-binding domain; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding domain YP_005058883.1 KEGG: apt:APA01_15220 feruloyl esterase; PFAM: Tannase/feruloyl esterase YP_005058884.1 KEGG: aba:Acid345_0356 alpha amylase, catalytic region; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain YP_005058885.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aba:Acid345_0918 Cna B-type protein YP_005058886.1 KEGG: aba:Acid345_1711 hypothetical protein YP_005058887.1 KEGG: bcm:Bcenmc03_5539 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005058888.1 KEGG: bcj:BCAM1946 putative quinoxaline efflux system transporter protein; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein YP_005058889.1 manually curated; TIGRFAM: Secretion protein HlyD; KEGG: nde:NIDE2964 multidrug efflux transporter, membrane fusion protein; PFAM: Secretion protein HlyD YP_005058890.1 TIGRFAM: Conserved hypothetical protein CHP03118; KEGG: aba:Acid345_1897 hypothetical protein YP_005058891.1 KEGG: aca:ACP_2664 putative lipoprotein; PFAM: Peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A YP_005058892.1 KEGG: bja:bll3646 hypothetical protein YP_005058893.1 KEGG: bja:bll3645 hypothetical protein YP_005058894.1 KEGG: bxe:Bxe_C1225 xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding; Aldehyde oxidase/xanthine dehydrogenase, a/b hammerhead YP_005058895.1 KEGG: oca:OCAR_5617 oxidoreductase; PFAM: Molybdopterin dehydrogenase, FAD-binding; CO dehydrogenase flavoprotein, C-terminal YP_005058896.1 KEGG: bpt:Bpet3936 putative xanthine dehydrogenase; PFAM: [2Fe-2S]-binding; Ferredoxin YP_005058897.1 KEGG: sus:Acid_4922 peptidase S45, penicillin amidase; PFAM: Peptidase S45, penicillin amidase YP_005058898.1 PFAM: Amidohydrolase 1; KEGG: aba:Acid345_2377 amidohydrolase YP_005058899.1 KEGG: aca:ACP_0640 hypothetical protein YP_005058900.1 PFAM: Amidohydrolase 1; KEGG: aca:ACP_1652 amidohydrolase family protein YP_005058901.1 KEGG: saq:Sare_4899 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 12; Ricin B lectin; SMART: Ricin B lectin YP_005058902.1 KEGG: bgl:bglu_2g08980 putative secreted protein YP_005058903.1 KEGG: sma:SAV_1077 melibiase; PFAM: Glycoside hydrolase, family 31 YP_005058904.1 PFAM: Domain of unknown function DUF336; KEGG: bph:Bphy_6609 hypothetical protein YP_005058905.1 KEGG: aba:Acid345_1715 hypothetical protein YP_005058906.1 KEGG: sus:Acid_4579 hypothetical protein YP_005058907.1 KEGG: bts:Btus_0523 40-residue YVTN family beta-propeller repeat protein; TIGRFAM: YVTN beta-propeller repeat; PFAM: Phosphoesterase; Lactonase, 7-bladed beta propeller YP_005058908.1 KEGG: bid:Bind_1167 hypothetical protein YP_005058909.1 KEGG: bid:Bind_1167 hypothetical protein YP_005058910.1 PFAM: Metallo-dependent phosphatase; KEGG: acr:Acry_2003 acid phosphatase YP_005058911.1 KEGG: sus:Acid_3341 hypothetical protein YP_005058912.1 KEGG: snp:SPAP_0423 ribonuclease HIII YP_005058913.1 KEGG: aca:ACP_1259 TcrA; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005058914.1 KEGG: aca:ACP_1260 sensor histidine kinase, putative; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain YP_005058915.1 KEGG: sli:Slin_6734 hypothetical protein YP_005058916.1 KEGG: sus:Acid_1644 Cna B domain-containing protein YP_005058917.1 KEGG: sus:Acid_6896 heavy metal sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain YP_005058918.1 KEGG: aba:Acid345_0311 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005058919.1 KEGG: sus:Acid_3341 hypothetical protein YP_005058920.1 SMART: Pyrrolo-quinoline quinone beta-propeller repeat; KEGG: aca:ACP_1580 hypothetical protein YP_005058922.1 KEGG: gym:GYMC10_3438 xylan 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 43 YP_005058923.1 PFAM: Glycoside hydrolase, family 31; KEGG: aca:ACP_1639 alpha-xylosidase YP_005058924.1 KEGG: aca:ACP_0908 xylann 1,4-beta-xylosidase; PFAM: Glycoside hydrolase, family 39 YP_005058925.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_1258 hypothetical protein YP_005058926.1 KEGG: sus:Acid_6084 hypothetical protein YP_005058927.1 PFAM: Glycoside hydrolase, family 35; KEGG: xca:xccb100_2508 exported beta-galactosidase-like glycoside hydrolase YP_005058928.1 KEGG: aca:ACP_2108 beta-glucosidase; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005058929.1 KEGG: aca:ACP_3025 sugar MFS transporter, fucose:H+ symporter (FHS) family; TIGRFAM: Bacterial glucose/galactose transporter; PFAM: Major facilitator superfamily MFS-1 YP_005058930.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aca:ACP_0894 ABC transporter, permease protein YP_005058931.1 PFAM: ABC transporter-like; KEGG: aca:ACP_0895 efflux ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005058932.1 KEGG: aca:ACP_0896 acyl-CoA thioesterase I; PFAM: Lipase, GDSL YP_005058933.1 KEGG: aca:ACP_0897 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase II, TruB; PFAM: Pseudouridine synthase II YP_005058934.1 TIGRFAM: GTP cyclohydrolase I; KEGG: aca:ACP_0898 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_005058935.1 PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: aba:Acid345_2209 6-pyruvoyl tetrahydropterin synthase YP_005058936.1 PFAM: 6-pyruvoyl tetrahydropterin synthase-related; KEGG: aba:Acid345_2210 6-pyruvoyl tetrahydropterin synthase YP_005058937.1 PFAM: Glycosyl transferase, family 2; KEGG: aca:ACP_0900 glycosyl transferase, group 2 family YP_005058938.1 PFAM: Redoxin; KEGG: aca:ACP_0901 putative thioredoxin family protein YP_005058939.1 KEGG: aca:ACP_0902 hypothetical protein YP_005058940.1 KEGG: afr:AFE_1141 hypothetical protein YP_005058941.1 KEGG: aac:Aaci_2317 hypothetical protein YP_005058942.1 PFAM: Iron permease FTR1; Protein of unknown function DUF2318, membrane; KEGG: aba:Acid345_1870 iron permease FTR1 YP_005058943.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aba:Acid345_1869 ABC efflux pump, inner membrane subunit YP_005058944.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aba:Acid345_1868 ABC efflux pump, inner membrane subunit YP_005058945.1 PFAM: ABC transporter-like; KEGG: aba:Acid345_1867 ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core YP_005058946.1 PFAM: Inorganic polyphosphate/ATP-NAD kinase, predicted; KEGG: aca:ACP_0680 NAD(+)/NADH kinase YP_005058947.1 TIGRFAM: Haemolysin A; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4; KEGG: aca:ACP_0681 hemolysin A; SMART: RNA-binding S4 YP_005058948.1 KEGG: aca:ACP_0984 hypothetical protein YP_005058949.1 KEGG: aca:ACP_0976 thioredoxin, DsbD family; PFAM: Cytochrome c assembly protein, transmembrane domain; Domain of unknown function DUF255 YP_005058950.1 KEGG: dmo:Dmoj_GI16284 GI16284 gene product from transcript GI16284-RA YP_005058951.1 KEGG: rbi:RB2501_02390 aspartate aminotransferase YP_005058952.1 KEGG: rbi:RB2501_02390 aspartate aminotransferase YP_005058953.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, ATPase subunit; KEGG: tth:TTC0137 phosphoribosylaminoimidazole carboxylase ATPase subunit; PFAM: ATP-grasp fold, ATP-dependent carboxylate-amine ligase-type YP_005058954.1 TIGRFAM: Phosphoribosylaminoimidazole carboxylase, core; KEGG: ftn:FTN_0422 N5-carboxyaminoimidazole ribonucleotide mutase; PFAM: Phosphoribosylaminoimidazole carboxylase, core YP_005058955.1 TIGRFAM: Phosphoribosylglycinamide formyltransferase; KEGG: pif:PITG_12300 phosphoribosylglycinamide synthetase, putative; PFAM: Formyl transferase, N-terminal YP_005058956.1 TIGRFAM: Phosphoribosylglycinamide synthetase; KEGG: ftn:FTN_0420 SAICAR synthetase/phosphoribosylamine-glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_005058957.1 KEGG: lpa:lpa_02418 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_005058958.1 TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: fph:Fphi_0419 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein YP_005058959.1 TIGRFAM: Phosphoribosylformylglycinamidine synthase; KEGG: avn:Avin_39660 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein YP_005058960.1 TIGRFAM: Amidophosphoribosyl transferase; KEGG: pag:PLES_19521 amidophosphoribosyltransferase; PFAM: Phosphoribosyltransferase; Glutamine amidotransferase, class-II YP_005058961.1 KEGG: dsy:DSY1256 hypothetical protein YP_005058962.1 PFAM: DSBA-like thioredoxin domain; KEGG: aca:ACP_0670 DsbA-like thioredoxin domain protein YP_005058963.1 KEGG: aca:ACP_0671 NAD+ synthetase; TIGRFAM: NAD synthase; PFAM: NAD/GMP synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_005058964.1 TIGRFAM: Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; KEGG: aca:ACP_0742 putative galactosyl transferase CpsE; PFAM: Bacterial sugar transferase YP_005058965.1 PFAM: ABC transporter-like; KEGG: aca:ACP_3546 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005058966.1 HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: aca:ACP_3545 putative molybdopterin-guanine dinucleotide biosynthesis protein A YP_005058967.1 KEGG: aca:ACP_3542 peptidase, M20/M25/M40 family; PFAM: Peptidase M20; Peptidase M20, dimerisation YP_005058968.1 KEGG: sus:Acid_7681 hypothetical protein YP_005058969.1 PFAM: Lipase, GDSL; KEGG: aca:ACP_0560 rhamnogalacturonan acetylesterase YP_005058970.1 KEGG: met:M446_2308 AMP-dependent synthetase and ligase YP_005058971.1 SMART: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; TIGRFAM: SecA protein; KEGG: aca:ACP_2983 preprotein translocase, SecA subunit; HAMAP: SecA protein; PFAM: SecA DEAD-like, N-terminal; SecA preprotein, cross-linking domain; SecA Wing/Scaffold; SEC-C motif YP_005058972.1 PFAM: Activator of Hsp90 ATPase homologue 1-like; KEGG: msl:Msil_1119 activator of HSP90 ATPase 1 family protein YP_005058973.1 KEGG: msl:Msil_1120 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005058974.1 KEGG: aba:Acid345_2282 rhodanese/sulfurtransferase-like protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_005058975.1 PFAM: HEAT; KEGG: sus:Acid_3888 hypothetical protein YP_005058976.1 TIGRFAM: KDPG/KHG aldolase; KEGG: sus:Acid_5289 2-keto-3-deoxy-phosphogluconate aldolase; PFAM: KDPG/KHG aldolase YP_005058977.1 PFAM: Carbohydrate/purine kinase; KEGG: scl:sce5155 putative 2-dehydro-3-deoxygluconokinase YP_005058978.1 KEGG: caa:Caka_0816 4-deoxy-L-threo-5-hexosulose-uronateketol-isomer ase; PFAM: KduI/IolB isomerase YP_005058979.1 PFAM: Cupin 2, conserved barrel; KEGG: cse:Cseg_0361 cupin 2 conserved barrel domain-containing protein YP_005058980.1 KEGG: aca:ACP_2465 2-deoxy-D-gluconate 3-dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005058981.1 PFAM: Integrase, catalytic core; KEGG: bxe:Bxe_A0541 putative transposase integrase YP_005058982.1 PFAM: Protein of unknown function DUF3224; KEGG: aba:Acid345_1450 hypothetical protein YP_005058983.1 KEGG: aba:Acid345_1461 rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; PFAM: Cell shape determining protein MreB/Mrl YP_005058984.1 TIGRFAM: Alanine dehydrogenase/pyridine nucleotide transhydrogenase; KEGG: aca:ACP_1690 alanine dehydrogenase; PFAM: Alanine dehydrogenase/PNT, C-terminal; Alanine dehydrogenase/PNT, N-terminal YP_005058985.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: aca:ACP_1692 nitrogen regulation protein NtrY, putative; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005058986.1 KEGG: aca:ACP_1693 sigma-54 dependent DNA-binding response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver domain; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver domain; ATPase, AAA+ type, core YP_005058987.1 PFAM: Domain of unknown function DUF1731, C-terminal; NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_0960 hypothetical protein YP_005058988.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: mpd:MCP_0973 GCN5-related N-acetyltransferase family protein YP_005058989.1 TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; KEGG: aca:ACP_1697 GTP-binding protein Era; SMART: ATPase, AAA+ type, core YP_005058990.1 PFAM: Domain of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated domain; KEGG: aca:ACP_1698 CBS/transporter domain protein YP_005058991.1 KEGG: aca:ACP_1699 conserved hypothetical protein TIGR00043; TIGRFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted; PFAM: Uncharacterised protein family UPF0054, metalloprotease YbeY, predicted YP_005058992.1 PFAM: PhoH-like protein; KEGG: aca:ACP_1700 PhoH family protein YP_005058993.1 KEGG: aca:ACP_1707 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; PFAM: Ribosomal protein S20 YP_005058994.1 KEGG: msm:MSMEG_2945 Holliday junction DNA helicase RuvB YP_005058995.1 KEGG: aca:ACP_2297 peptidase, M13 (neprilysin) family; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal YP_005058996.1 PFAM: Drug/metabolite transporter; KEGG: aca:ACP_2000 membrane protein YP_005058997.1 PFAM: Protein of unknown function DUF3761; KEGG: rme:Rmet_5664 hypothetical protein YP_005058998.1 PFAM: Fusaric acid resistance protein, conserved region; KEGG: mxa:MXAN_1396 hypothetical protein YP_005058999.1 KEGG: aba:Acid345_4034 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005059000.1 KEGG: cyh:Cyan8802_0726 putative transcriptional regulator, CopG/Arc/MetJ family YP_005059001.1 manually curated; TIGRFAM: Cof protein; HAD-superfamily hydrolase, subfamily IIB; KEGG: aca:ACP_1749 HAD-superfamily hydrolase, subfamily IIB; PFAM: HAD superfamily hydrolase-like, type 3 YP_005059002.1 PFAM: Lytic transglycosylase-like, catalytic; KEGG: aca:ACP_1751 transglycosylase SLT domain protein YP_005059003.1 PFAM: Lysylphosphatidylglycerol synthetase/UPF0104; KEGG: aca:ACP_1752 hypothetical protein YP_005059004.1 KEGG: aca:ACP_1461 transcriptional regulator NrdR; TIGRFAM: Ribonucleotide reductase regulator NrdR-like; PFAM: ATP-cone YP_005059005.1 KEGG: aca:ACP_1462 putative isocitrate dehydrogenase, NAD-dependent; PFAM: Isocitrate/isopropylmalate dehydrogenase YP_005059006.1 KEGG: sus:Acid_4384 hypothetical protein YP_005059007.1 KEGG: uma:UsmafMp09 NADH:ubiquinone oxidoreductase subunit 4 YP_005059008.1 SMART: Semialdehyde dehydrogenase, NAD-binding; TIGRFAM: Aspartate-semialdehyde dehydrogenase, peptidoglycan lacking; KEGG: aca:ACP_1463 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation domain YP_005059009.1 TIGRFAM: Aspartate kinase domain; KEGG: aca:ACP_1464 aspartate kinase III; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT YP_005059010.1 TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; KEGG: aca:ACP_1466 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase, C-terminal; Dihydrodipicolinate reductase, N-terminal YP_005059011.1 KEGG: bcj:BCAL0585 hypothetical protein YP_005059012.1 PFAM: Peptidase M29, aminopeptidase II; KEGG: aba:Acid345_3212 aminopeptidase T YP_005059013.1 PFAM: PilT protein, N-terminal; KEGG: ava:Ava_3324 PilT protein-like YP_005059014.1 KEGG: sth:STH2290 hypothetical protein YP_005059015.1 PFAM: Protein of unknown function DUF1211, TMEM175; KEGG: hau:Haur_2934 hypothetical protein YP_005059016.1 TIGRFAM: Dihydrodipicolinate synthase subfamily; KEGG: aca:ACP_1467 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase YP_005059017.1 KEGG: sus:Acid_3103 mandelate racemase/muconate lactonizing protein; PFAM: Mandelate racemase/muconate lactonizing enzyme, C-terminal; SMART: Mandelate racemase/muconate lactonizing enzyme, C-terminal YP_005059018.1 KEGG: sus:Acid_5627 hypothetical protein YP_005059019.1 PFAM: Acetyl xylan esterase; KEGG: sus:Acid_1122 dipeptidyl aminopeptidases/acylaminoacyl-peptidase-like protein YP_005059020.1 KEGG: aca:ACP_1468 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_005059021.1 KEGG: aca:ACP_1340 hypothetical protein YP_005059022.1 KEGG: aca:ACP_1469 metallo-beta-lactamase family protein; PFAM: Beta-lactamase-like; RNA-metabolising metallo-beta-lactamase; SMART: Beta-lactamase-like YP_005059023.1 PFAM: Protein of unknown function DUF3617; KEGG: mei:Msip34_1137 hypothetical protein YP_005059024.1 KEGG: aba:Acid345_0395 hypothetical protein YP_005059025.1 PFAM: Protein of unknown function DUF2059; KEGG: pfo:Pfl01_4092 hypothetical protein YP_005059026.1 KEGG: aca:ACP_2061 oligopeptide transporter, OPT family; TIGRFAM: Oligopeptide transporter OPT; Oligopeptide transporter OPT superfamily; PFAM: Oligopeptide transporter OPT superfamily YP_005059027.1 KEGG: aca:ACP_1920 tetratricopeptide repeat protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat YP_005059028.1 manually curated; KEGG: oan:Oant_3185 cobyrinic acid ac-diamide synthase YP_005059029.1 KEGG: cak:Caul_3277 glycoside hydrolase family protein YP_005059030.1 KEGG: nwa:Nwat_2433 hypothetical protein YP_005059031.1 SMART: ATPase, AAA+ type, core; KEGG: bph:Bphy_4982 hypothetical protein YP_005059032.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0549 hypothetical protein YP_005059033.1 PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 29; KEGG: cpi:Cpin_6474 coagulation factor 5/8 type domain protein; SMART: Glycoside hydrolase, family 29 YP_005059034.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aba:Acid345_0663 TonB-dependent receptor YP_005059035.1 KEGG: xcv:XCV2155 two-component system sensor protein; PFAM: Two component regulator three Y; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; Two component regulator propeller; SMART: ATPase-like, ATP-binding domain; Fibronectin, type III YP_005059036.1 KEGG: cre:CHLREDRAFT_15852 cytosine-C5 specific DNA methyltransferase YP_005059037.1 KEGG: cak:Caul_0621 two component LuxR family transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005059038.1 KEGG: dak:DaAHT2_2586 HipA N-terminal domain protein; TIGRFAM: HipA, N-terminal; PFAM: HipA-like, N-terminal; HipA-like, C-terminal YP_005059039.1 KEGG: asc:ASAC_0635 subtilisin-like serine protease YP_005059040.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bte:BTH_II2362 esterase EstC YP_005059041.1 TIGRFAM: VCBS repeat; Domain of unknown function DUF11; PFAM: Coagulation factor 5/8 type, C-terminal; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich; Immunoglobulin I-set; KEGG: cce:Ccel_1239 carbohydrate binding family 6; SMART: Coagulation factor 5/8 type, C-terminal; Immunoglobulin subtype YP_005059042.1 PFAM: Condensation domain; KEGG: msl:Msil_3898 condensation domain protein YP_005059043.1 KEGG: mlo:msr1859 hypothetical protein YP_005059044.1 PFAM: Oxoglutarate/iron-dependent oxygenase; KEGG: mxa:MXAN_5937 alkylated DNA repair protein AlkB YP_005059045.1 PFAM: Protein of unknown function DUF2086; KEGG: bja:blr2962 hypothetical protein YP_005059046.1 TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Ada DNA repair, metal-binding; HTH transcriptional regulator, AraC; KEGG: mpt:Mpe_A3753 transcriptional regulator Ada / DNA-O6-methylguanine--protein-cysteine S-methyltransferase; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005059047.1 KEGG: meh:M301_2685 DNA-3-methyladenine glycosylase II; PFAM: HhH-GPD domain; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1 YP_005059048.1 KEGG: rha:RHA1_ro02332 methylated-DNA--[protein]-cysteine S-methyltransferase; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding YP_005059049.1 KEGG: scb:SCAB_57142 hypothetical protein; TIGRFAM: DNA mismatch endonuclease vsr; PFAM: DNA mismatch endonuclease vsr YP_005059050.1 KEGG: aca:ACP_1341 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059051.1 KEGG: aca:ACP_1342 transporter, hydrophobe/amphiphile efflux-1 family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein YP_005059052.1 KEGG: aca:ACP_1343 outer membrane efflux protein OprM; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005059053.1 PFAM: ABC transporter, transmembrane domain; ABC transporter-like; KEGG: sus:Acid_4432 ABC transporter related; SMART: ATPase, AAA+ type, core YP_005059054.1 PFAM: Protein of unknown function DUF1486; KEGG: bur:Bcep18194_A4917 hypothetical protein YP_005059055.1 KEGG: bxe:Bxe_A3363 hypothetical protein YP_005059056.1 KEGG: hne:HNE_2953 cytochrome P450 family protein; PFAM: Cytochrome P450 YP_005059057.1 KEGG: aba:Acid345_0450 protease; PFAM: Peptidase S53, propeptide; Peptidase S8/S53, subtilisin/kexin/sedolisin; SMART: Peptidase S53, propeptide YP_005059058.1 KEGG: lel:LELG_01613 hypothetical protein YP_005059059.1 KEGG: yen:YE3257 hypothetical protein YP_005059060.1 KEGG: ppd:Ppro_2604 ATP-dependent protease La YP_005059061.1 KEGG: bfu:BC1G_09656 hypothetical protein YP_005059062.1 SMART: HTH transcriptional regulator, Crp; KEGG: npu:Npun_F2502 cyclic nucleotide-binding protein YP_005059063.1 KEGG: amr:AM1_6106 AraC family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005059064.1 KEGG: xce:Xcel_0427 fibronectin type III domain protein YP_005059065.1 KEGG: dwi:Dwil_GK19939 GK19939 gene product from transcript GK19939-RA YP_005059066.1 KEGG: xcv:XCV2152 two component system sensor protein; PFAM: Two component regulator three Y; Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005059067.1 KEGG: apt:APA01_03830 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP-binding domain; Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_005059068.1 KEGG: eba:ebA3804 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; HTH transcriptional regulator, MarR; SMART: Transcription regulator AsnC-type YP_005059069.1 KEGG: aca:ACP_3028 aromatic-L-amino-acid decarboxylase; PFAM: Pyridoxal phosphate-dependent decarboxylase YP_005059070.1 KEGG: bcj:BCAL2530 hypothetical protein YP_005059071.1 TIGRFAM: Chorismate mutase, periplasmic; PFAM: Chorismate mutase, type II; KEGG: hse:Hsero_0433 chorismate mutase; SMART: Chorismate mutase YP_005059072.1 PFAM: Cupin 2, conserved barrel; KEGG: msm:MSMEG_3484 cupin domain-containing protein YP_005059073.1 KEGG: tbi:Tbis_2923 ECF subfamily RNA polymerase sigma-24; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005059074.1 KEGG: nha:Nham_2675 putative transmembrane transcriptional regulator (anti-sigma factor) YP_005059076.1 KEGG: kfl:Kfla_5216 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2 YP_005059077.1 manually curated; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; KEGG: aba:Acid345_3748 two component LuxR family transcriptional regulator; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005059078.1 KEGG: ncr:NCU02068 hypothetical protein YP_005059079.1 KEGG: rsc:RCFBP_10528 putative hydrolases or acyltransferases (alpha/beta hydrolase superfamily) YP_005059080.1 PFAM: Protein of unknown function DUF1634; KEGG: aba:Acid345_3911 hypothetical protein YP_005059081.1 PFAM: Protein of unknown function DUF81; KEGG: aba:Acid345_3912 hypothetical protein YP_005059082.1 PFAM: Lipase, GDSL; KEGG: bcm:Bcenmc03_2650 phospholipase/lecithinase/hemolysin-like protein YP_005059083.1 KEGG: aca:ACP_2557 antioxidant, AhpC/TSA family; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal YP_005059085.1 KEGG: rlt:Rleg2_0482 NAD-dependent epimerase/dehydratase YP_005059086.1 KEGG: bpy:Bphyt_5494 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region YP_005059087.1 KEGG: sus:Acid_4774 hypothetical protein YP_005059088.1 PFAM: Protein of unknown function DUF1486; KEGG: bur:Bcep18194_A4917 hypothetical protein YP_005059089.1 KEGG: sus:Acid_5713 pyrrolo-quinoline quinone; PFAM: Pyrrolo-quinoline quinone repeat; PQQ-dependent enzyme, N-terminal; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_005059090.1 PFAM: General substrate transporter; KEGG: har:HEAR3004 MFS family transporter YP_005059091.1 KEGG: cse:Cseg_2284 hypothetical protein YP_005059092.1 KEGG: mmi:MMAR_4427 dehydrogenase fad flavoprotein GMC oxidoreductase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal YP_005059094.1 PFAM: Domain of unknown function DUF418; KEGG: sli:Slin_3566 protein of unknown function DUF418 YP_005059095.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: aca:ACP_3196 ParB family protein; SMART: ParB-like nuclease YP_005059096.1 KEGG: aca:ACP_3195 hypothetical protein YP_005059097.1 KEGG: aca:ACP_1222 hypothetical protein YP_005059098.1 KEGG: iag:Igag_1681 type II secretion system F domain YP_005059099.1 KEGG: hne:HNE_3190 ISHne2, transposase; manually curated; PFAM: Integrase, catalytic core YP_005059100.1 KEGG: nve:NEMVE_v1g225269 hypothetical protein YP_005059101.1 KEGG: aca:ACP_3225 hypothetical protein YP_005059102.1 KEGG: aca:ACP_3165 hypothetical protein YP_005059103.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aca:ACP_3164 transcriptional regulator, LysR family YP_005059104.1 KEGG: enc:ECL_03704 putative IS3 family transposase orfB YP_005059105.1 PFAM: Integrase, catalytic core, phage; KEGG: aba:Acid345_4275 phage integrase YP_005059106.1 KEGG: aca:ACP_2677 endo-polygalacturonase/pectinesterase; PFAM: Glycoside hydrolase, family 28 YP_005059107.1 KEGG: aca:ACP_1918 hypothetical protein YP_005059108.1 KEGG: aba:Acid345_1153 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; Localisation of periplasmic protein complexes; SMART: Cell wall hydrolase/autolysin, catalytic YP_005059109.1 TIGRFAM: Alanyl-tRNA synthetase, class IIc; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Phosphoesterase, DHHA1; Threonyl/alanyl tRNA synthetase, SAD; KEGG: sus:Acid_4756 alanyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD YP_005059110.1 PFAM: Prevent-host-death protein; KEGG: rca:Rcas_1056 hypothetical protein YP_005059111.1 KEGG: cob:COB47_1162 PilT protein domain protein; manually curated; PFAM: PilT protein, N-terminal YP_005059112.1 KEGG: rcu:RCOM_1935660 hypothetical protein YP_005059113.1 KEGG: rcu:RCOM_1935670 Regulatory protein recX, putative; HAMAP: Regulatory protein RecX; PFAM: Regulatory protein RecX YP_005059114.1 KEGG: aba:Acid345_4193 peptidase S9, prolyl oligopeptidase active site region YP_005059115.1 KEGG: aca:ACP_1784 hypothetical protein YP_005059116.1 KEGG: aca:ACP_2057 HNH endonuclease domain protein; PFAM: HNH endonuclease; SMART: HNH nuclease YP_005059117.1 PFAM: Phosphoribosyltransferase; KEGG: aca:ACP_2058 ComF family protein YP_005059118.1 KEGG: aca:ACP_2397 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA oxidase/dehydrogenase, central domain; Acyl-CoA dehydrogenase, N-terminal YP_005059119.1 KEGG: ddi:DDB_G0278453 hypothetical protein YP_005059120.1 KEGG: aca:ACP_0953 protoheme IX farnesyltransferase; TIGRFAM: Protohaem IX farnesyltransferase; PFAM: UbiA prenyltransferase YP_005059121.1 PFAM: Protein of unknown function DUF420; KEGG: aca:ACP_0956 hypothetical protein YP_005059122.1 KEGG: aca:ACP_0957 hypothetical protein YP_005059123.1 KEGG: aca:ACP_0958 single-strand binding protein; TIGRFAM: Single-strand DNA-binding; PFAM: Primosome PriB/single-strand DNA-binding YP_005059124.1 KEGG: cai:Caci_5218 lipolytic protein G-D-S-L family; PFAM: Bulb-type lectin domain; Lipase, GDSL; SMART: Bulb-type lectin domain YP_005059125.1 TIGRFAM: Conserved hypothetical protein CHP03790; PFAM: Carbohydrate binding domain, family 6; KEGG: cth:Cthe_1271 carbohydrate-binding family 6 protein; SMART: Cellulose binding, type IV YP_005059126.1 KEGG: aca:ACP_0867 putative lipoprotein YP_005059127.1 KEGG: rlg:Rleg_3782 glycoside hydrolase family 2 TIM barrel; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_005059128.1 PFAM: Protein of unknown function DUF1624; KEGG: aca:ACP_3497 hypothetical protein YP_005059129.1 KEGG: amu:Amuc_0060 alpha-N-acetylglucosaminidase; PFAM: Alpha-N-acetylglucosaminidase YP_005059130.1 KEGG: sne:SPN23F_17820 cell wall surface anchored protein YP_005059131.1 manually curated; KEGG: aca:ACP_0728 hypothetical protein YP_005059132.1 PFAM: Protein of unknown function DUF3455; KEGG: scl:sce1235 hypothetical protein YP_005059133.1 KEGG: cyj:Cyan7822_3721 outer membrane protein YP_005059134.1 KEGG: kra:Krad_0162 hypothetical protein YP_005059135.1 TIGRFAM: Conserved hypothetical protein CHP03118; KEGG: mno:Mnod_3253 hypothetical protein YP_005059136.1 PFAM: Glycoside hydrolase, family 65, central catalytic; KEGG: cai:Caci_5219 hypothetical protein YP_005059137.1 KEGG: sus:Acid_3235 putative alpha-1,2-mannosidase; TIGRFAM: Alpha-1,2-mannosidase, putative; PFAM: Glycosyl hydrolase 92 YP_005059139.1 PFAM: Drug/metabolite transporter; KEGG: ote:Oter_0662 sugar transport family protein YP_005059140.1 KEGG: sus:Acid_0468 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005059141.1 KEGG: sli:Slin_5242 inositol oxygenase; PFAM: Inositol oxygenase YP_005059142.1 KEGG: smd:Smed_4133 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 2, TIM barrel; Glycoside hydrolase, family 2, carbohydrate-binding; Glycoside hydrolase, family 2, immunoglobulin-like beta-sandwich YP_005059143.1 TIGRFAM: Glycoside hydrolase, family 1, beta-glucosidase; Twin-arginine translocation pathway, signal sequence; KEGG: ttr:Tter_1939 beta-galactosidase; PFAM: Glycoside hydrolase, family 1 YP_005059144.1 KEGG: app:CAP2UW1_0807 organic solvent tolerance protein YP_005059145.1 KEGG: dge:Dgeo_1002 NHL repeat-containing protein YP_005059146.1 KEGG: sus:Acid_7945 Cna B domain-containing protein YP_005059147.1 KEGG: glo:Glov_3116 transposase IS4 family protein YP_005059148.1 PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; KEGG: aca:ACP_0316 transcriptional regulator, putative YP_005059149.1 KEGG: aca:ACP_0216 hypothetical protein; TIGRFAM: Frataxin-like; PFAM: Frataxin-like YP_005059150.1 PFAM: Glycosyl transferase, family 2; KEGG: aca:ACP_1266 glycosyl transferase, group 2 family YP_005059151.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: sus:Acid_4762 short-chain dehydrogenase/reductase SDR YP_005059152.1 KEGG: aca:ACP_2834 thioesterase family protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; PFAM: Thioesterase superfamily YP_005059153.1 KEGG: aba:Acid345_1426 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core YP_005059154.1 KEGG: aca:ACP_1662 HMGL domain protein; PFAM: Pyruvate carboxyltransferase YP_005059155.1 KEGG: aca:ACP_1664 carboxyl transferase domain protein; PFAM: Carboxyl transferase YP_005059156.1 KEGG: aba:Acid345_2884 transcriptional regulator YP_005059157.1 PFAM: Plasmid stabilisation system; KEGG: cyc:PCC7424_3207 plasmid stabilization system YP_005059158.1 KEGG: bra:BRADO2106 nicotinamidase/pyrazinamidase; PFAM: Isochorismatase-like YP_005059159.1 KEGG: rer:RER_01670 hypothetical protein YP_005059160.1 PFAM: Metal-dependent phosphohydrolase, HD subdomain; KEGG: gau:GAU_0528 hypothetical protein YP_005059161.1 KEGG: gbr:Gbro_3732 amino acid adenylation domain protein YP_005059162.1 KEGG: aba:Acid345_1414 XRE family transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005059163.1 PFAM: Di-trans-poly-cis-decaprenylcistransferase-like; TIGRFAM: Di-trans-poly-cis-decaprenylcistransferase-like; HAMAP: Di-trans-poly-cis-decaprenylcistransferase-like; KEGG: aca:ACP_1627 undecaprenyl diphosphate synthase YP_005059164.1 KEGG: chu:CHU_0679 hypothetical protein YP_005059165.1 KEGG: aba:Acid345_2105 hypothetical protein YP_005059166.1 PFAM: Phosphatidate cytidylyltransferase; KEGG: aca:ACP_1613 phosphatidate cytidylyltransferase YP_005059167.1 KEGG: ttu:TERTU_2541 hypothetical protein YP_005059168.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: aca:ACP_1612 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_005059169.1 TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; PFAM: Peptidase M50; KEGG: aca:ACP_1611 peptidase, M50 family; SMART: PDZ/DHR/GLGF YP_005059170.1 PFAM: CopG-like DNA-binding; KEGG: gvi:gsr2076 hypothetical protein YP_005059171.1 PFAM: Plasmid stabilisation system; KEGG: nhl:Nhal_0317 addiction module toxin, RelE/StbE family YP_005059172.1 PFAM: Phosphoesterase, DHHA1; KEGG: aca:ACP_1660 hypothetical protein YP_005059173.1 PFAM: Abortive infection protein; KEGG: aba:Acid345_3225 abortive infection protein YP_005059174.1 KEGG: aba:Acid345_3370 penicillin amidase; PFAM: Peptidase S45, penicillin amidase YP_005059175.1 PFAM: Membrane protein, 6-pyruvoyl-tetrahydropterin synthase-related domain; KEGG: aba:Acid345_2733 hypothetical protein YP_005059176.1 KEGG: aca:ACP_1656 geranylgeranyl diphosphate synthase; PFAM: Polyprenyl synthetase YP_005059177.1 KEGG: ppp:PHYPADRAFT_164863 hypothetical protein YP_005059178.1 PFAM: Domain of unknown function DUF59; KEGG: aba:Acid345_1805 hypothetical protein YP_005059179.1 KEGG: hoh:Hoch_1306 hypothetical protein YP_005059181.1 KEGG: aca:ACP_3160 conserved hypothetical protein TIGR00150; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria YP_005059182.1 KEGG: aca:ACP_3159 YjeF family protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; PFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal YP_005059183.1 PFAM: Penicillin-binding protein, transpeptidase; KEGG: aca:ACP_1079 putative penicillin-binding protein YP_005059184.1 TIGRFAM: Cell division protein FtsZ, N-terminal; PFAM: Tubulin/FtsZ, GTPase domain; KEGG: aca:ACP_1080 cell division protein FtsZ; SMART: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain YP_005059185.1 KEGG: sbn:Sbal195_0170 outer membrane adhesin like proteiin YP_005059186.1 TIGRFAM: Cell division protein family FtsA; PFAM: Cell division protein FtsA domain; KEGG: aca:ACP_1081 cell division protein FtsA; SMART: Cell division protein FtsA domain YP_005059187.1 PFAM: Polypeptide-transport-associated, FtsQ-type; KEGG: aca:ACP_1082 hypothetical protein YP_005059188.1 TIGRFAM: UDP-N-acetylmuramate-alanine ligase; KEGG: aca:ACP_1083 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, C-terminal; Mur ligase, N-terminal; Mur ligase, central YP_005059189.1 PFAM: FR47-like; KEGG: sna:Snas_1374 GCN5-related N-acetyltransferase YP_005059190.1 PFAM: Acetamidase/Formamidase; KEGG: aca:ACP_3388 transcriptional regulatory protein YP_005059191.1 KEGG: aba:Acid345_0178 hypothetical protein YP_005059192.1 TIGRFAM: N-acetylglucosaminyltransferase, MurG; KEGG: aca:ACP_1086 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28 YP_005059193.1 KEGG: aca:ACP_1087 cell division protein FtsW; TIGRFAM: Cell division protein FtsW; PFAM: Cell cycle protein YP_005059194.1 KEGG: aca:ACP_1088 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal YP_005059195.1 TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; KEGG: aca:ACP_1089 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_005059196.1 TIGRFAM: UDP-MurNAc-pentapeptide synthetase; KEGG: aba:Acid345_3633 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal YP_005059197.1 TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase; KEGG: aca:ACP_1091 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal YP_005059198.1 KEGG: aca:ACP_1092 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PASTA YP_005059199.1 PFAM: Cell division protein FtsL; KEGG: aca:ACP_1093 hypothetical protein YP_005059200.1 KEGG: aca:ACP_1094 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW YP_005059201.1 PFAM: MraZ domain; KEGG: aca:ACP_1095 putative MraZ protein YP_005059202.1 KEGG: aca:ACP_1096 hypothetical protein YP_005059203.1 KEGG: gau:GAU_2727 putative hydroxylase; PFAM: Oxoglutarate/iron-dependent oxygenase; SMART: Prolyl 4-hydroxylase, alpha subunit YP_005059204.1 KEGG: aca:ACP_1277 TonB-dependent receptor; PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; SMART: Secretin/TonB, short N-terminal YP_005059205.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Deoxyxylulose-5-phosphate synthase; KEGG: aca:ACP_2818 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; Thiamine pyrophosphate enzyme, C-terminal TPP-binding YP_005059206.1 TIGRFAM: Deoxycytidine triphosphate deaminase; KEGG: aca:ACP_3335 deoxycytidine triphosphate deaminase; PFAM: DeoxyUTP pyrophosphatase domain YP_005059207.1 KEGG: aca:ACP_3334 DNA-binding protein HU 1; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein YP_005059208.1 TIGRFAM: Primosomal protein n; PFAM: Restriction endonuclease, type I, R subunit/Type III, Res subunit; Helicase, C-terminal; KEGG: aca:ACP_0611 primosomal protein N'; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal YP_005059209.1 KEGG: aca:ACP_2423 threonyl and alanyl tRNA synthetase/DHHA1 domain protein; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; SMART: Threonyl/alanyl tRNA synthetase, SAD YP_005059210.1 KEGG: psl:Psta_4531 inositol phosphatase/fructose-16-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase class 1/Sedoheputulose-1,7-bisphosphatase YP_005059211.1 KEGG: sus:Acid_6650 peptidase M24; PFAM: Peptidase M24, structural domain; Creatinase YP_005059212.1 PFAM: Protein of unknown function DUF1330; KEGG: bxe:Bxe_A0727 hypothetical protein YP_005059213.1 KEGG: aba:Acid345_2820 peptidase S15; TIGRFAM: CocE/NonD hydrolase; SMART: Peptidase S15/CocE/NonD, C-terminal YP_005059214.1 KEGG: sus:Acid_1083 von Willebrand factor, type A YP_005059215.1 KEGG: aca:ACP_1997 DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III, delta YP_005059216.1 manually curated; KEGG: aba:Acid345_2357 hypothetical protein YP_005059217.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: ote:Oter_4155 GCN5-related N-acetyltransferase YP_005059218.1 PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: svo:SVI_4322 aminopeptidase family YP_005059219.1 KEGG: sfu:Sfum_3969 hypothetical protein YP_005059220.1 SMART: ATPase, AAA+ type, core; TIGRFAM: Peptidase M41, FtsH; KEGG: aca:ACP_2036 ATP-dependent metalloprotease FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular YP_005059221.1 TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; HAMAP: Lysidine-tRNA(Ile) synthetase; KEGG: aba:Acid345_0062 tRNA(Ile)-lysidine synthetase-like; PFAM: tRNA(Ile)-lysidine/2-thiocytidine synthase YP_005059222.1 KEGG: bte:BTH_I0654 M48 family peptidase YP_005059223.1 KEGG: gox:GOX1736 hypothetical protein YP_005059224.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aca:ACP_2232 acetyltransferase, GNAT family YP_005059225.1 KEGG: aca:ACP_1617 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_005059226.1 TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; KEGG: aca:ACP_1616 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core YP_005059227.1 KEGG: aca:ACP_0600 hypothetical protein YP_005059228.1 TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; KEGG: hoh:Hoch_4662 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_005059229.1 KEGG: aca:ACP_1679 hypothetical protein YP_005059230.1 PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; KEGG: aca:ACP_1678 thiol-disulfide oxidoreductase YP_005059231.1 TIGRFAM: KpsF/GutQ; KEGG: aca:ACP_1676 sugar isomerase, KpsF/GutQ family; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core YP_005059232.1 KEGG: reh:H16_A2057 PII uridylyl-transferase YP_005059233.1 KEGG: aca:ACP_2832 proline--tRNA ligase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; YbaK/aminoacyl-tRNA synthetase-associated domain; Anticodon-binding YP_005059234.1 TIGRFAM: Penicillin-binding protein 1A; KEGG: aca:ACP_2831 penicillin-binding protein; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase YP_005059235.1 KEGG: aca:ACP_1040 mannose-6-phosphate isomerase, class I; PFAM: Mannose-6-phosphate isomerase, type I YP_005059236.1 KEGG: aca:ACP_3025 sugar MFS transporter, fucose:H+ symporter (FHS) family; TIGRFAM: Bacterial glucose/galactose transporter; PFAM: Major facilitator superfamily MFS-1 YP_005059237.1 KEGG: aca:ACP_1574 IPT/TIG domain protein; TIGRFAM: Domain of unknown function DUF11; PFAM: Cell surface receptor IPT/TIG YP_005059238.1 KEGG: mrb:Mrub_1388 allantoinase YP_005059239.1 TIGRFAM: Thioredoxin reductase; KEGG: aca:ACP_2700 thioredoxin-disulfide reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region YP_005059240.1 KEGG: chl:Chy400_1351 hypothetical protein YP_005059241.1 KEGG: aca:ACP_1673 ribonuclease, Rne/Rng family, insertion; TIGRFAM: Ribonuclease E/G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G YP_005059243.1 KEGG: aca:ACP_1674 rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; PFAM: Cell cycle protein YP_005059244.1 TIGRFAM: Penicillin-binding protein 2; KEGG: aca:ACP_1684 penicillin-binding protein; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain YP_005059245.1 KEGG: aca:ACP_1685 rod shape-determining protein MreD; TIGRFAM: Cell shape-determining protein MreD; PFAM: Cell shape-determining protein MreD YP_005059246.1 PFAM: Acyltransferase 3; KEGG: gox:GOX1137 lipopolysaccharide modification acyltransferase YP_005059247.1 KEGG: afu:AF1542 hypothetical protein; manually curated; PFAM: Transcription regulator PadR N-terminal-like YP_005059248.1 KEGG: ade:Adeh_0541 hypothetical protein YP_005059249.1 KEGG: bte:BTH_II1776 hypothetical protein YP_005059250.1 KEGG: bac:BamMC406_6175 hypothetical protein YP_005059251.1 KEGG: aca:ACP_2863 two-component hybrid sensor and regulator, putative; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059252.1 KEGG: aba:Acid345_3099 two component transcriptional regulator; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005059253.1 KEGG: scl:sce2182 naringenin-chalcone synthase; PFAM: Chalcone/stilbene synthase, C-terminal; Chalcone/stilbene synthase, N-terminal YP_005059254.1 PFAM: Methyltransferase type 11; KEGG: scl:sce2183 3-demethylubiquinone-9 3-O-methyltransferase YP_005059255.1 PFAM: Protein of unknown function DUF2306, membrane; KEGG: aba:Acid345_2268 hypothetical protein YP_005059256.1 PFAM: FAD dependent oxidoreductase; KEGG: scl:sce2184 putative electron transfer oxidoreductase YP_005059257.1 KEGG: aca:ACP_0881 hypothetical protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like YP_005059258.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: sus:Acid_1745 multicopper oxidase, type 2 YP_005059259.1 KEGG: sus:Acid_7015 hypothetical protein YP_005059260.1 TIGRFAM: Doubled CXXCH motif; KEGG: sus:Acid_7220 cytochrome c family protein YP_005059261.1 PFAM: O-methyltransferase, family 3; KEGG: aba:Acid345_3881 O-methyltransferase family protein YP_005059262.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: xcv:XCV0477 putative secreted protein YP_005059263.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: sco:SCO6619 dehydrogenase YP_005059264.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: mag:amb4163 transcriptional regulator YP_005059265.1 TIGRFAM: Conserved hypothetical protein CHP03118; KEGG: aba:Acid345_1897 hypothetical protein YP_005059266.1 KEGG: cro:ROD_07171 putative ammonia monooxygenase YP_005059267.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: tra:Trad_2131 GCN5-related N-acetyltransferase YP_005059268.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: hau:Haur_1851 short-chain dehydrogenase/reductase SDR YP_005059269.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gdj:Gdia_2524 GCN5-related N-acetyltransferase YP_005059270.1 KEGG: aca:ACP_1686 rod shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; PFAM: Rod shape-determining protein MreC YP_005059271.1 TIGRFAM: DNA helicase, ATP-dependent, RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; KEGG: aca:ACP_1743 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal YP_005059272.1 PFAM: Protein of unknown function DUF891; KEGG: eba:ebA3772 hypothetical protein YP_005059273.1 KEGG: gur:Gura_1358 helix-turn-helix domain-containing protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005059274.1 KEGG: aba:Acid345_0967 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005059275.1 KEGG: aba:Acid345_0966 phenazine biosynthesis PhzC/PhzF protein; TIGRFAM: Phenazine biosynthesis PhzC/PhzF protein; PFAM: Phenazine biosynthesis PhzC/PhzF protein YP_005059276.1 KEGG: aca:ACP_2557 antioxidant, AhpC/TSA family; PFAM: Alkyl hydroperoxide reductase subunit C/ Thiol specific antioxidant; Peroxiredoxin, C-terminal YP_005059277.1 KEGG: sus:Acid_2840 hypothetical protein YP_005059278.1 KEGG: aca:ACP_2717 hypothetical protein YP_005059279.1 KEGG: gbm:Gbem_1171 sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059280.1 KEGG: aba:Acid345_0509 two component transcriptional regulator; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005059281.1 KEGG: aba:Acid345_4465 hypothetical protein YP_005059282.1 TIGRFAM: Potassium-transporting ATPase, B chain; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; KEGG: aca:ACP_0430 K+-transporting ATPase, B subunit; PFAM: ATPase, P-type, ATPase-associated domain; Haloacid dehalogenase-like hydrolase YP_005059283.1 KEGG: aba:Acid345_2411 PAS/PAC sensor hybrid histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059284.1 KEGG: npu:Npun_R2263 hybrid histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; Signal transduction response regulator, receiver domain; ATPase-like, ATP-binding domain YP_005059285.1 KEGG: npu:Npun_R2264 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: Sporulation stage II, protein E C-terminal; SMART: Protein phosphatase 2C-like YP_005059286.1 KEGG: mrd:Mrad2831_5231 putative anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005059287.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2415 anti-sigma-factor antagonist YP_005059288.1 PFAM: Sulphate transporter/antisigma-factor antagonist STAS; KEGG: aba:Acid345_2416 anti-sigma-factor antagonist YP_005059289.1 KEGG: aba:Acid345_1067 secretion protein HlyD; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059290.1 KEGG: aba:Acid345_1068 hydrophobe/amphiphile efflux-1 HAE1; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein YP_005059291.1 KEGG: aba:Acid345_2110 glycoside hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; Glycoside hydrolase, family 3, C-terminal YP_005059292.1 KEGG: spe:Spro_2306 peptidyl-dipeptidase DCP; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F YP_005059293.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: ote:Oter_2130 alpha/beta hydrolase fold YP_005059294.1 PFAM: Putative esterase; KEGG: sus:Acid_3215 putative esterase YP_005059295.1 TIGRFAM: YVTN beta-propeller repeat; PFAM: Phosphoesterase; KEGG: sus:Acid_4558 YVTN beta-propeller repeat-containing protein; SMART: WD40 repeat YP_005059296.1 KEGG: aca:ACP_2717 hypothetical protein YP_005059297.1 KEGG: sus:Acid_0070 integral membrane sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059298.1 KEGG: aca:ACP_1249 KdpE; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005059299.1 TIGRFAM: Formylmethionine deformylase; KEGG: mca:MCA1371 peptide deformylase; PFAM: Formylmethionine deformylase YP_005059300.1 TIGRFAM: Cysteine desulfurase, SufS; KEGG: mag:amb1849 cysteine desulfurase 1; PFAM: Aminotransferase, class V/Cysteine desulfurase YP_005059301.1 KEGG: neu:NE0574 major membrane protein I YP_005059302.1 KEGG: aba:Acid345_0634 AsnC family transcriptional regulator; PFAM: Transcription regulator AsnC-type, C-terminal; SMART: Transcription regulator AsnC-type YP_005059303.1 PFAM: Protein of unknown function DUF2029; KEGG: aba:Acid345_0896 hypothetical protein YP_005059304.1 PFAM: Radical SAM; KEGG: aba:Acid345_0881 radical SAM family Fe-S protein YP_005059305.1 PFAM: Amidohydrolase 1; KEGG: aba:Acid345_0880 amidohydrolase YP_005059306.1 PFAM: Methyltransferase type 11; KEGG: aba:Acid345_0878 hypothetical protein YP_005059307.1 KEGG: aba:Acid345_0875 radical SAM family Fe-S protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB YP_005059308.1 KEGG: aca:ACP_2717 hypothetical protein YP_005059309.1 KEGG: sus:Acid_3085 hypothetical protein YP_005059310.1 PFAM: Major facilitator superfamily MFS-1; KEGG: pau:PA14_49610 MFS family transporter YP_005059311.1 TIGRFAM: Phospholipase C, phosphocholine-specific; Twin-arginine translocation pathway, signal sequence; KEGG: bch:Bcen2424_3145 phospholipase C; PFAM: Phosphoesterase; Phospholipase C, bacterial, C-terminal YP_005059312.1 KEGG: aca:ACP_2662 hypothetical protein YP_005059313.1 KEGG: cpb:Cphamn1_2463 DNA topoisomerase I YP_005059314.1 KEGG: gla:GL50803_40496 Dynein heavy chain YP_005059315.1 KEGG: aca:ACP_1343 outer membrane efflux protein OprM; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005059316.1 KEGG: aca:ACP_1342 transporter, hydrophobe/amphiphile efflux-1 family; TIGRFAM: Hydrophobe/amphiphile efflux-1 HAE1; PFAM: Acriflavin resistance protein YP_005059317.1 KEGG: aca:ACP_1341 efflux transporter, RND family, MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059318.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_2212 transcriptional regulatory protein, putative YP_005059319.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_4916 TonB-dependent receptor, plug YP_005059320.1 PFAM: Glycerol-3-phosphate responsive antiterminator; KEGG: dtu:Dtur_0128 glycerol-3-phosphate responsive antiterminator, GlpP YP_005059321.1 KEGG: aca:ACP_1286 hypothetical protein YP_005059322.1 KEGG: cai:Caci_8646 NHL repeat containing protein YP_005059323.1 KEGG: sus:Acid_5965 hypothetical protein YP_005059324.1 KEGG: sus:Acid_3638 Cna B domain-containing protein YP_005059325.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: rpi:Rpic_3701 6-phosphogluconolactonase YP_005059326.1 PFAM: FAD linked oxidase, N-terminal; Berberine/berberine-like; KEGG: rpi:Rpic_3700 berberine/berberine domain protein YP_005059327.1 KEGG: sus:Acid_6153 TonB-dependent receptor, plug YP_005059328.1 KEGG: sus:Acid_6084 hypothetical protein YP_005059329.1 KEGG: fbc:FB2170_14038 hypothetical protein YP_005059330.1 KEGG: aca:ACP_0049 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D YP_005059331.1 KEGG: bfr:BF4121 hypothetical protein YP_005059332.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: sus:Acid_7945 Cna B domain-containing protein YP_005059333.1 KEGG: aba:Acid345_1711 hypothetical protein YP_005059334.1 KEGG: sus:Acid_6257 hypothetical protein; PFAM: Ricin B lectin; Pyrrolo-quinoline quinone repeat; SMART: Ricin B lectin; Pyrrolo-quinoline quinone beta-propeller repeat YP_005059335.1 TIGRFAM: Extracellular HAF; KEGG: geo:Geob_2007 extracellular repeat protein, HAF family YP_005059336.1 PFAM: Glycosyl hydrolase, family 13, catalytic domain; KEGG: aca:ACP_0985 alpha amylase domain protein YP_005059337.1 PFAM: Acriflavin resistance protein; KEGG: sus:Acid_7568 acriflavin resistance protein YP_005059338.1 KEGG: sus:Acid_7569 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059339.1 PFAM: Outer membrane efflux protein; KEGG: sus:Acid_7567 outer membrane efflux protein YP_005059340.1 KEGG: aba:Acid345_4017 hypothetical protein YP_005059341.1 KEGG: glo:Glov_1807 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005059342.1 KEGG: gbm:Gbem_2673 HAMP domain-containing sensor histidine kinase; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; HAMP linker domain YP_005059343.1 KEGG: aca:ACP_1259 TcrA; PFAM: Signal transduction response regulator, C-terminal; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005059344.1 KEGG: aca:ACP_1260 sensor histidine kinase, putative; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059345.1 PFAM: TonB-dependent receptor, plug; Collagen-binding surface protein Cna-like, B-type domain; TonB-dependent receptor, beta-barrel; KEGG: sus:Acid_3639 TonB-dependent receptor YP_005059347.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059348.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059349.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059350.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059351.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059352.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059353.1 KEGG: nde:NIDE0214 putative heme utilization protein YP_005059354.1 PFAM: NHL repeat; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059355.1 KEGG: aca:ACP_2433 ferrochelatase; TIGRFAM: Ferrochelatase; PFAM: Ferrochelatase YP_005059356.1 PFAM: Type II/III secretion system; KEGG: aca:ACP_0097 hypothetical protein YP_005059357.1 KEGG: cal:CaO19.9736 similar to S. cerevisiae VRP1 (YLR337C) proline-rich protein verprolin; potential actin-interacting WH2 motif YP_005059358.1 manually curated; TIGRFAM: RNA polymerase sigma-70; KEGG: bbt:BBta_7492 RNA polymerase sigma factor; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005059359.1 TIGRFAM: Uroporphyrinogen decarboxylase HemE; KEGG: aca:ACP_2432 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_005059360.1 KEGG: lbc:LACBIDRAFT_326979 hypothetical protein YP_005059361.1 KEGG: aca:ACP_1499 inorganic diphosphatase; PFAM: Inorganic pyrophosphatase YP_005059362.1 PFAM: Amino acid permease domain; KEGG: aca:ACP_1500 putative amino acid transporter YP_005059363.1 KEGG: kko:Kkor_0590 beta-lactamase domain protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005059364.1 TIGRFAM: Amino acid adenylation; KEGG: xal:XALc_1145 probable non-ribosomal peptide synthetase protein; PFAM: AMP-dependent synthetase/ligase; Condensation domain; Thioesterase; Phosphopantetheine-binding YP_005059365.1 KEGG: xal:XALc_1144 putative glycosyltransferase protein; PFAM: Glycosyl transferase, family 28; UDP-glucuronosyl/UDP-glucosyltransferase YP_005059366.1 PFAM: Condensation domain; KEGG: cpi:Cpin_1443 alcohol acetyltransferase YP_005059367.1 PFAM: Condensation domain; KEGG: cpi:Cpin_1444 condensation domain protein YP_005059368.1 PFAM: Glycosyl transferase, family 2; KEGG: bur:Bcep18194_B0560 rhamnosyltransferase YP_005059369.1 PFAM: Condensation domain; KEGG: cpi:Cpin_1443 alcohol acetyltransferase YP_005059370.1 PFAM: ABC transporter-like; KEGG: sus:Acid_0602 ABC transporter related; SMART: ATPase, AAA+ type, core YP_005059371.1 PFAM: ABC-2 type transporter; KEGG: sus:Acid_0603 ABC-2 type transporter YP_005059372.1 KEGG: pau:PA14_19110 rhamnosyltransferase chain B YP_005059373.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: bac:BamMC406_3435 alpha/beta hydrolase fold YP_005059374.1 KEGG: dvi:Dvir_GJ18936 GJ18936 gene product from transcript GJ18936-RA YP_005059375.1 PFAM: Multicopper oxidase, type 2; Multicopper oxidase, type 3; Multicopper oxidase, type 1; KEGG: aba:Acid345_4180 multicopper oxidase, type 2 YP_005059376.1 PFAM: PEGA; Prophage tail fibre N-terminal; KEGG: aba:Acid345_3525 Cna B-type protein YP_005059377.1 KEGG: xtr:100489557 olfactory receptor 10A7-like YP_005059378.1 KEGG: sus:Acid_6153 TonB-dependent receptor, plug YP_005059379.1 KEGG: cyh:Cyan8802_2979 hypothetical protein YP_005059380.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: gtn:GTNG_0852 acetyltransferase YP_005059381.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: mlo:mlr0493 peroxidase YP_005059382.1 KEGG: bmj:BMULJ_05860 AraC subfamily transcriptional regulator; PFAM: ThiJ/PfpI; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005059383.1 KEGG: nmu:Nmul_A0915 hypothetical protein YP_005059384.1 KEGG: bbt:BBta_0109 organic hydroperoxide resistance protein; TIGRFAM: Peroxiredoxin, organic hydroperoxide resistance-related; PFAM: Peroxiredoxin, OsmC-like protein YP_005059385.1 KEGG: bxe:Bxe_B1746 hypothetical protein YP_005059386.1 KEGG: bja:bll7410 hypothetical protein YP_005059387.1 PFAM: Cytochrome b/b6, N-terminal; KEGG: sli:Slin_4243 hypothetical protein YP_005059388.1 PFAM: Oxidoreductase, molybdopterin-binding domain; KEGG: sus:Acid_1449 oxidoreductase, molybdopterin binding YP_005059389.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: acr:Acry_3308 LysR family transcriptional regulator YP_005059390.1 KEGG: rlt:Rleg2_2367 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005059391.1 PFAM: Endoribonuclease L-PSP; KEGG: rlt:Rleg2_2368 endoribonuclease L-PSP YP_005059392.1 PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b; KEGG: aca:ACP_0029 glycosyl hydrolase, family 20 YP_005059393.1 KEGG: sen:SACE_5672 hypothetical protein YP_005059394.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_3219 hypothetical protein YP_005059395.1 KEGG: sus:Acid_0138 hypothetical protein; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2 YP_005059396.1 PFAM: WD40-like Beta Propeller; KEGG: aba:Acid345_4155 transcriptional regulatory protein-like YP_005059397.1 KEGG: sus:Acid_6854 Cna B-type protein YP_005059398.1 KEGG: swi:Swit_0698 protein tyrosine/serine phosphatase YP_005059399.1 PFAM: Protein of unknown function DUF2075; KEGG: pol:Bpro_0004 hypothetical protein YP_005059400.1 KEGG: bmn:BMA10247_0632 putative lipoprotein YP_005059401.1 KEGG: ftn:FTN_1485 chitin-binding protein YP_005059402.1 PFAM: Protein of unknown function DUF1223; KEGG: aba:Acid345_3896 hypothetical protein YP_005059403.1 KEGG: aca:ACP_1800 hypothetical protein YP_005059404.1 KEGG: aba:Acid345_0526 hypothetical protein YP_005059405.1 PFAM: Uncharacterised protein family UPF0276; KEGG: aca:ACP_2674 hypothetical protein YP_005059406.1 PFAM: Protein of unknown function DUF2063; KEGG: aca:ACP_2673 hypothetical protein YP_005059407.1 KEGG: avn:Avin_33880 twin-arginine translocation pathway signal and cupin region containing protein YP_005059408.1 KEGG: aba:Acid345_2802 hypothetical protein YP_005059409.1 KEGG: glo:Glov_0050 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver domain; Signal transduction response regulator, C-terminal YP_005059410.1 KEGG: scl:sce4827 hypothetical protein; PFAM: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059411.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: plu:plu1744 hypothetical protein YP_005059412.1 KEGG: sus:Acid_6952 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059413.1 PFAM: Acriflavin resistance protein; KEGG: aba:Acid345_2830 acriflavin resistance protein YP_005059414.1 PFAM: Acriflavin resistance protein; KEGG: sus:Acid_6950 acriflavin resistance protein YP_005059415.1 KEGG: sus:Acid_6949 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005059416.1 KEGG: sna:Snas_1951 hypothetical protein YP_005059417.1 KEGG: cai:Caci_3492 coagulation factor 5/8 type domain protein; PFAM: Malectin; Fibronectin, type III; SMART: Fibronectin, type III YP_005059418.1 KEGG: rmr:Rmar_0525 glycoside hydrolase family 9; manually curated; PFAM: Glycoside hydrolase, family 9 YP_005059419.1 KEGG: sli:Slin_3356 chitinase; PFAM: Glycoside hydrolase, family 18, catalytic domain; SMART: Chitinase II YP_005059420.1 PFAM: Protein of unknown function DUF1624; KEGG: cpi:Cpin_5069 hypothetical protein YP_005059421.1 PFAM: Sulphur relay, DsrE/F-like protein; KEGG: slt:Slit_1694 domain of unknown function DUF1791 YP_005059422.1 KEGG: ure:UREG_02792 hypothetical protein YP_005059423.1 PFAM: Amino acid permease domain; KEGG: xac:XAC3079 cationic amino acid transporter YP_005059424.1 PFAM: Carbohydrate/purine kinase; KEGG: sus:Acid_1926 ribokinase-like domain-containing protein YP_005059425.1 KEGG: amd:AMED_4460 lipase/esterase YP_005059426.1 PFAM: ROK; KEGG: cwo:Cwoe_4996 ROK family protein YP_005059427.1 PFAM: Glycoside hydrolase, family 18, catalytic domain; Carbohydrate-binding domain, family 5/12; Fibronectin, type III; KEGG: aca:ACP_0038 chitinase A; SMART: Chitinase II; Carbohydrate-binding domain, family 5/12; Fibronectin, type III YP_005059428.1 PFAM: TonB-dependent receptor, plug; Collagen-binding surface protein Cna-like, B-type domain; KEGG: aca:ACP_0040 TonB-dependent receptor plug domain protein YP_005059429.1 KEGG: aba:Acid345_2735 beta-N-acetylhexosaminidase; PFAM: Glycoside hydrolase, family 20, catalytic core; Acetylhexosaminidase, subunit a/b YP_005059430.1 PFAM: Glycosyl transferase, family 39; KEGG: aca:ACP_2072 tetratricopeptide repeat protein YP_005059431.1 PFAM: AMP-dependent synthetase/ligase; Phosphopantetheine-binding; Phospholipid/glycerol acyltransferase; KEGG: aca:ACP_2704 AMP-binding enzyme; SMART: Phospholipid/glycerol acyltransferase YP_005059432.1 KEGG: eic:NT01EI_2151 fibronectin type III domain protein; PFAM: Glycoside hydrolase, family 18, catalytic domain; Carbohydrate binding domain, family 6 YP_005059433.1 PFAM: Glycoside hydrolase, family 5; KEGG: pjd:Pjdr2_4071 glycoside hydrolase family 5 YP_005059434.1 KEGG: nde:NIDE4051 hypothetical protein YP_005059435.1 TIGRFAM: Ribosomal protein S4, bacterial-type; PFAM: RNA-binding S4; Ribosomal protein S4/S9, N-terminal; KEGG: bba:Bd3112 30S ribosomal protein S4; SMART: RNA-binding S4 YP_005059436.1 KEGG: aca:ACP_0273 hypothetical protein YP_005059437.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: ara:Arad_15031 phytanoil-CoA alpha hydroxylase protein YP_005059438.1 KEGG: cti:RALTA_A0221 hypothetical protein YP_005059439.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: aba:Acid345_2433 TonB-dependent receptor YP_005059440.1 KEGG: aca:ACP_1864 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; PFAM: Amidase YP_005059441.1 KEGG: aca:ACP_1865 glutamyl-tRNA; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase, C subunit YP_005059442.1 PFAM: Protein of unknown function DUF721/UPF0232; KEGG: aba:Acid345_0498 hypothetical protein YP_005059443.1 PFAM: Glycosyl transferase, family 9; KEGG: dds:Ddes_1756 glycosyl transferase family 9 YP_005059444.1 KEGG: vpr:Vpar_0021 exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: Bacterial sugar transferase YP_005059445.1 TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; Histidinol-phosphate phosphatase; HAD-superfamily hydrolase, subfamily IIIA; KEGG: dak:DaAHT2_1101 D,D-heptose 1,7-bisphosphate phosphatase YP_005059446.1 PFAM: Glycosyl transferase, family 9; KEGG: mfe:Mefer_0513 glycosyl transferase family 9 YP_005059447.1 KEGG: hna:Hneap_0491 glycosyl transferase group 1 YP_005059448.1 KEGG: pfl:PFL_5101 O-acetyltransferase, putative YP_005059449.1 KEGG: asa:ASA_0141 hypothetical protein YP_005059450.1 TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; KEGG: hmg:100214331 similar to Mannose-1-phosphate guanyltransferase beta; PFAM: Nucleotidyl transferase YP_005059451.1 TIGRFAM: Protoporphyrinogen oxidase; KEGG: aca:ACP_2434 protoporphyrinogen oxidase; PFAM: Amine oxidase YP_005059452.1 TIGRFAM: FO synthase, subunit 2; Menaquinone biosynthesis, SCO4550; PFAM: Radical SAM; KEGG: aca:ACP_1642 radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_005059453.1 KEGG: cyn:Cyan7425_2845 hypothetical protein YP_005059454.1 PFAM: Protein of unknown function DUF497; KEGG: npu:Npun_F0976 hypothetical protein YP_005059455.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rle:RL0363 putative glyoxalase YP_005059456.1 KEGG: aba:Acid345_2904 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2 YP_005059457.1 KEGG: aca:ACP_1672 hypothetical protein YP_005059458.1 KEGG: sus:Acid_5879 hypothetical protein YP_005059459.1 KEGG: aba:Acid345_4204 hypothetical protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; PFAM: Alanine racemase, N-terminal YP_005059460.1 KEGG: app:CAP2UW1_3597 protein of unknown function DUF167; HAMAP: Protein of unknown function DUF167; PFAM: Protein of unknown function DUF167 YP_005059461.1 KEGG: mei:Msip34_0783 MgtC/SapB transporter YP_005059462.1 KEGG: aca:ACP_2679 polygalacturonase; PFAM: Glycoside hydrolase, family 28 YP_005059463.1 PFAM: Domain of unknown function DUF262; KEGG: dly:Dehly_0806 hypothetical protein YP_005059464.1 KEGG: xtr:100488850 fatty-acid amide hydrolase 2-like YP_005059465.1 PFAM: Protein of unknown function DUF1680; KEGG: ppy:PPE_00225 DUF1680 domain containing protein YP_005059466.1 PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; NAD/GMP synthase; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; HAMAP: GMP synthase; KEGG: aca:ACP_1114 GMP synthase YP_005059467.1 KEGG: aca:ACP_1116 hypothetical protein YP_005059468.1 TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; KEGG: aca:ACP_1117 leucyl-tRNA synthetase YP_005059469.1 KEGG: aba:Acid345_3665 hypothetical protein YP_005059470.1 SMART: Endodeoxyribonuclease IV; TIGRFAM: Endodeoxyribonuclease IV; KEGG: aca:ACP_1118 deoxyribonuclease IV (phage-T(4)-induced); PFAM: Xylose isomerase, TIM barrel domain YP_005059471.1 manually curated; KEGG: mca:MCA0431 flavodoxin domain-containing protein; PFAM: Oxidoreductase FAD/NAD(P)-binding; FAD-binding, type 1 YP_005059472.1 KEGG: mab:MAB_0555 non-hemolytic phospholipase C; PFAM: Phosphoesterase YP_005059473.1 KEGG: sus:Acid_2638 glucosylceramidase; PFAM: Glycoside hydrolase, family 30 YP_005059474.1 KEGG: aca:ACP_0424 putative transcriptional regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; HTH transcriptional regulator, LacI; SMART: HTH transcriptional regulator, LacI YP_005059475.1 KEGG: aca:ACP_0423 transporter, major facilitator family YP_005059476.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_3347 putative acyltransferase YP_005059477.1 PFAM: Acyltransferase 3; KEGG: aba:Acid345_3043 acyltransferase 3 YP_005059478.1 PFAM: Protein of unknown function DUF2029; KEGG: sen:SACE_3999 hypothetical protein YP_005059479.1 PFAM: Transposase, IS111A/IS1328/IS1533, N-terminal; KEGG: ccs:CCNA_03018 transposase YP_005059480.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_3347 putative acyltransferase YP_005059481.1 PFAM: PQQ-dependent enzyme, N-terminal; PQQ-dependent enzyme, C-terminal; Pyrrolo-quinoline quinone repeat; KEGG: sus:Acid_4075 quinoprotein glucose dehydrogenase; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_005059482.1 KEGG: apr:Apre_0667 serine/threonine protein kinase with PASTA sensor(s); PFAM: Serine/threonine-protein kinase-like domain; SMART: Serine/threonine-protein kinase domain; Tyrosine-protein kinase, catalytic domain YP_005059483.1 KEGG: dpo:Dpse_GA23052 GA23052 gene product from transcript GA23052-RA YP_005059484.1 KEGG: rha:RHA1_ro03472 UreA amidolyase YP_005059485.1 KEGG: gbe:GbCGDNIH1_0340 hypothetical protein YP_005059486.1 PFAM: UBA/THIF-type NAD/FAD binding fold; KEGG: fal:FRAAL0856 hypothetical protein YP_005059487.1 PFAM: Forkhead-associated (FHA) domain; KEGG: cyj:Cyan7822_6380 hypothetical protein YP_005059488.1 KEGG: tcu:Tcur_1863 von Willebrand factor type A; PFAM: von Willebrand factor, type A; SMART: von Willebrand factor, type A YP_005059489.1 KEGG: vvy:VVA0987 hypothetical protein YP_005059490.1 KEGG: dfe:Dfer_3586 hypothetical protein YP_005059491.1 KEGG: fre:Franean1_2214 hypothetical protein YP_005059492.1 KEGG: swo:Swol_0193 flagellin-like protein YP_005059493.1 KEGG: bfs:BF2026 hypothetical protein YP_005059494.1 KEGG: csa:Csal_1989 methyl-accepting chemotaxis sensory transducer YP_005059495.1 KEGG: aau:AAur_3615 putative phage-related protein YP_005059496.1 PFAM: Protein of unknown function DUF1305; KEGG: tau:Tola_0198 type VI secretion protein, VC_A0111 family YP_005059497.1 KEGG: xoo:XOO3484 hypothetical protein YP_005059498.1 KEGG: mgm:Mmc1_0147 ATPase; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core YP_005059499.1 KEGG: psl:Psta_4238 protein of unknown function DUF1080; PFAM: Forkhead-associated (FHA) domain; Protein of unknown function DUF1080; SMART: Forkhead-associated (FHA) domain YP_005059500.1 KEGG: aca:ACP_1026 serine/threonine protein phosphatase, 2C family; PFAM: Protein phosphatase 2C, N-terminal; SMART: Protein phosphatase 2C-like YP_005059501.1 KEGG: chu:CHU_0660 hypothetical protein; TIGRFAM: Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D YP_005059502.1 KEGG: rsk:RSKD131_3714 ribonucleoside-diphosphate reductase YP_005059503.1 KEGG: mxa:MXAN_4800 rhs element Vgr family protein YP_005059504.1 KEGG: smm:Smp_034080 erythrocyte membrane protein YP_005059505.1 KEGG: cyh:Cyan8802_2957 TPR repeat-containing protein YP_005059506.1 KEGG: sro:Sros_6360 hypothetical protein YP_005059507.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_0770 transcriptional regulator, TetR family YP_005059508.1 KEGG: bja:bll6962 transcriptional regulatory protein; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005059509.1 KEGG: dfe:Dfer_5441 hypothetical protein YP_005059511.1 KEGG: aca:ACP_0769 hypothetical protein YP_005059512.1 KEGG: cse:Cseg_1400 hypothetical protein YP_005059513.1 PFAM: Type II/III secretion system; KEGG: aca:ACP_2961 type II/III secretion system protein YP_005059514.1 KEGG: aca:ACP_0743 aminotransferase, classes I and II; PFAM: Aminotransferase, class I/classII YP_005059515.1 PFAM: Protein of unknown function DUF899, thioredoxin-like; KEGG: rhi:NGR_c19940 hypothetical protein YP_005059516.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: aca:ACP_3121 acetyltransferase, GNAT family YP_005059517.1 KEGG: sus:Acid_4209 (NiFe) hydrogenase maturation protein HypF; TIGRFAM: Carbamoyltransferase, HypF-type; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type YP_005059518.1 KEGG: aca:ACP_3060 hydrogenase assembly chaperone HypC/HupF; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC YP_005059519.1 KEGG: aca:ACP_3059 hydrogenase expression/formation protein HypD; TIGRFAM: Hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein YP_005059520.1 KEGG: aca:ACP_3058 hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein YP_005059521.1 TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; KEGG: sus:Acid_6555 NADH ubiquinone oxidoreductase, 20 kDa subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit YP_005059522.1 KEGG: reh:PHG065 putative [NiFe] hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit YP_005059523.1 PFAM: NIF system FeS cluster assembly, NifU, C-terminal; KEGG: rer:RER_26520 hypothetical protein YP_005059524.1 KEGG: tcu:Tcur_4591 hypothetical protein YP_005059525.1 KEGG: sus:Acid_6558 hypothetical protein YP_005059526.1 KEGG: reh:PHG068 hypothetical protein YP_005059527.1 KEGG: reh:PHG069 hypothetical protein YP_005059528.1 KEGG: sti:Sthe_2494 hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; PFAM: Peptidase A31, hydrogen uptake protein YP_005059529.1 KEGG: rme:Rmet_4011 protocatechuate (4-hydroxybenzoate) transmembrane transporter YP_005059530.1 PFAM: Hydrogenase nickel incorporation protein HypA/HybF; KEGG: aba:Acid345_0925 hydrogenase expression/synthesis, HypA YP_005059531.1 KEGG: aba:Acid345_0924 hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like YP_005059532.1 PFAM: Nickel/cobalt transporter, high-affinity; KEGG: bts:Btus_0400 high-affinity nickel-transporter YP_005059533.1 KEGG: aca:ACP_1332 RNA polymerase sigma-70 factor, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005059534.1 KEGG: aba:Acid345_1341 hypothetical protein YP_005059535.1 PFAM: Protein of unknown function DUF3106; KEGG: aba:Acid345_1340 hypothetical protein YP_005059536.1 manually curated; KEGG: aca:ACP_1336 proline dehydrogenase; PFAM: Proline dehydrogenase YP_005059537.1 KEGG: bte:BTH_II1882 hypothetical protein YP_005059538.1 KEGG: dae:Dtox_0142 hypothetical protein YP_005059539.1 KEGG: aca:ACP_0785 hypothetical protein; TIGRFAM: Rhs repeat-associated core; YD repeat; PFAM: Conserved hyptothetical protein CHP02269, MYXXA; YD repeat YP_005059540.1 KEGG: aca:ACP_1629 glycosyl transferase, group 2 family; PFAM: Glycosyl transferase, family 2 YP_005059541.1 KEGG: aba:Acid345_4106 signal peptide peptidase A; TIGRFAM: Peptidase S49, SppA; PFAM: Peptidase S49 YP_005059542.1 KEGG: aca:ACP_1628 DNA-binding protein HU 1; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein YP_005059543.1 KEGG: bmn:BMA10247_A1668 ImpA-related N-terminal family protein YP_005059544.1 PFAM: NHL repeat; Two component regulator propeller; KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059545.1 PFAM: ABC transporter-like; KEGG: aba:Acid345_3570 ABC transporter, ATPase subunit; SMART: ATPase, AAA+ type, core YP_005059546.1 KEGG: aba:Acid345_3571 hypothetical protein YP_005059547.1 KEGG: aca:ACP_1585 conserved hypothetical protein TIGR00726; TIGRFAM: Multi-copper polyphenol oxidoreductase, laccase; PFAM: Multi-copper polyphenol oxidoreductase, laccase YP_005059548.1 TIGRFAM: Shikimate dehydrogenase; Dehydroquinase class I; KEGG: aca:ACP_2227 3-dehydroquinate dehydratase, type I domain/shikimate 5-dehydrogenase domain protein; PFAM: Dehydroquinase class I; Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase YP_005059549.1 TIGRFAM: Secretion protein HlyD; KEGG: aca:ACP_1563 efflux transporter, RND family, MFP subunit YP_005059550.1 KEGG: sus:Acid_4885 CzcA family heavy metal efflux protein; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein YP_005059551.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_1564 outer membrane efflux protein, putative YP_005059552.1 KEGG: sen:SACE_5523 hypothetical protein YP_005059553.1 KEGG: aca:ACP_2228 peptidase, M3 family; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F YP_005059554.1 PFAM: Vitamin K epoxide reductase; KEGG: aca:ACP_3002 vitamin K epoxide reductase family protein YP_005059555.1 KEGG: ecb:100051094 similar to blocked early in transport 1 homolog (S. cerevisiae) like YP_005059556.1 KEGG: aba:Acid345_2095 hypothetical protein YP_005059557.1 PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; KEGG: aca:ACP_1470 threonine dehydratase catabolic YP_005059558.1 KEGG: aca:ACP_1471 hypothetical protein YP_005059559.1 PFAM: Sulphatase-modifying factor; KEGG: tcu:Tcur_4811 non-specific serine/threonine protein kinase YP_005059560.1 PFAM: Sulfatase; KEGG: sus:Acid_0717 sulfatase YP_005059561.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005059562.1 KEGG: aba:Acid345_0533 LacI family transcription regulator; PFAM: Periplasmic binding protein/LacI transcriptional regulator; SMART: HTH transcriptional regulator, LacI YP_005059563.1 KEGG: aca:ACP_1493 hypothetical protein YP_005059564.1 KEGG: aca:ACP_1578 glycosyl hydrolase, family 39; PFAM: Glycoside hydrolase, family 39 YP_005059565.1 KEGG: aca:ACP_1578 glycosyl hydrolase, family 39; PFAM: Glycoside hydrolase, family 39 YP_005059566.1 PFAM: Protein of unknown function DUF2329; KEGG: aba:Acid345_0531 hypothetical protein YP_005059567.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: glo:Glov_0152 transcriptional regulator, LysR family YP_005059568.1 PFAM: Acriflavin resistance protein; KEGG: sus:Acid_3409 acriflavin resistance protein YP_005059569.1 KEGG: sus:Acid_3408 RND family efflux transporter MFP subunit; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059570.1 KEGG: sus:Acid_3407 RND efflux system outer membrane lipoprotein; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; PFAM: Outer membrane efflux protein YP_005059571.1 TIGRFAM: NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; NAD-dependent DNA ligase, OB-fold; KEGG: aca:ACP_1809 DNA ligase, NAD-dependent; SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT YP_005059572.1 PFAM: Fe(II) trafficking protein YggX; KEGG: aca:ACP_1973 hypothetical protein YP_005059573.1 PFAM: ABC transporter-like; KEGG: aav:Aave_2066 ABC transporter-related protein; SMART: ATPase, AAA+ type, core YP_005059574.1 KEGG: cci:CC1G_04667 hypothetical protein YP_005059575.1 KEGG: cyh:Cyan8802_3412 hypothetical protein YP_005059577.1 KEGG: rop:ROP_37950 hypothetical protein YP_005059578.1 KEGG: sus:Acid_2590 TPR repeat-containing protein; manually curated; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR-4 YP_005059579.1 KEGG: sus:Acid_2589 hypothetical protein YP_005059580.1 KEGG: sus:Acid_2588 hypothetical protein YP_005059581.1 KEGG: sus:Acid_2587 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma factor 70, region 4 type 2 YP_005059582.1 KEGG: aca:ACP_2263 hypothetical protein YP_005059583.1 PFAM: Glycosyl hydrolase, family 13, catalytic domain; Cyclomaltodextrinase, N-terminal; KEGG: aca:ACP_2520 alpha amylase family protein; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain YP_005059584.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_2519 hypothetical protein YP_005059585.1 KEGG: aca:ACP_2517 TolB domain protein; PFAM: Signal transduction response regulator, C-terminal; WD40-like Beta Propeller; SMART: Signal transduction response regulator, C-terminal YP_005059586.1 PFAM: Glycoside hydrolase, family 31; KEGG: aca:ACP_2410 alpha-glucosidase II YP_005059587.1 KEGG: aba:Acid345_3008 von Willebrand factor, type A; TIGRFAM: VWFA-related, acidobacterial-type; SMART: von Willebrand factor, type A YP_005059588.1 KEGG: aba:Acid345_3920 L-threonine 3-dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal YP_005059589.1 KEGG: eca:ECA0318 hypothetical protein YP_005059590.1 KEGG: aba:Acid345_4293 hypothetical protein YP_005059591.1 TIGRFAM: 8-amino-7-oxononanoate synthase/2-amino-3-ketobutyrate coenzyme A ligase; KEGG: aca:ACP_1916 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/classII YP_005059592.1 KEGG: sus:Acid_3429 peptidoglycan-binding LysM; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup YP_005059593.1 PFAM: Zeta toxin; KEGG: swi:Swit_4943 hypothetical protein YP_005059594.1 SMART: RelA/SpoT; Metal-dependent phosphohydrolase, HD domain; TIGRFAM: RelA/SpoT protein; KEGG: aca:ACP_2888 GTP pyrophosphokinase; PFAM: RelA/SpoT; TGS; Amino acid-binding ACT; Metal-dependent phosphohydrolase, HD subdomain YP_005059595.1 KEGG: sli:Slin_1558 hypothetical protein YP_005059596.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: aca:ACP_1912 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_005059597.1 KEGG: aca:ACP_1911 hypothetical protein YP_005059598.1 KEGG: aba:Acid345_4555 TonB-like protein YP_005059599.1 TIGRFAM: Molybdenum cofactor synthesis; PFAM: Molybdopterin binding; KEGG: aba:Acid345_4649 molybdopterin adenylyltransferase; SMART: Molybdopterin binding YP_005059600.1 PFAM: SNARE associated Golgi protein; KEGG: aca:ACP_1908 hypothetical protein YP_005059601.1 PFAM: Peptidase S1/S6, chymotrypsin/Hap; PEGA; KEGG: rpf:Rpic12D_3784 protease Do YP_005059602.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0067 putative Oar protein YP_005059604.1 KEGG: tai:Taci_1311 response regulator receiver modulated CheB methylesterase YP_005059605.1 PFAM: CMP/dCMP deaminase, zinc-binding; KEGG: pay:PAU_00119 deoxycytidylate deaminase-like protein YP_005059607.1 TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: aca:ACP_1586 vitamin B12-dependent ribonucleotide reductase; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase class II vitamin B12-dependent YP_005059608.1 KEGG: met:M446_6024 major facilitator transporter YP_005059609.1 KEGG: ton:TON_1541 hypothetical membrane protein, conserved YP_005059610.1 KEGG: aca:ACP_2498 ABC transporter, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_005059611.1 KEGG: aca:ACP_2497 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR YP_005059612.1 KEGG: aca:ACP_3486 YceI family protein; PFAM: Lipid/polyisoprenoid-binding, YceI-like; SMART: Lipid/polyisoprenoid-binding, YceI-like YP_005059613.1 KEGG: nph:NP1094A magnesium chelatase (protoporphyrin IX magnesium-chelatase), fused subunits ChlI/ChlD YP_005059614.1 PFAM: ThiJ/PfpI; KEGG: rcu:RCOM_0007380 hypothetical protein YP_005059615.1 manually curated; PFAM: ThiJ/PfpI; HTH transcriptional regulator, AraC; KEGG: rpf:Rpic12D_3749 transcriptional regulator, AraC family; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005059616.1 PFAM: Endoribonuclease L-PSP; KEGG: rlg:Rleg_0682 endoribonuclease L-PSP YP_005059617.1 PFAM: TonB-dependent receptor, beta-barrel; TonB-dependent receptor, plug; KEGG: sus:Acid_3639 TonB-dependent receptor YP_005059618.1 KEGG: phe:Phep_2967 hypothetical protein YP_005059619.1 PFAM: Integrase, catalytic core, phage; KEGG: xoo:XOO0599 phage integrase family site specific recombinase YP_005059620.1 KEGG: cai:Caci_6238 hypothetical protein YP_005059622.1 KEGG: mch:Mchl_5585 phosphoglycerate mutase YP_005059623.1 KEGG: aba:Acid345_4446 ammonium transporter; TIGRFAM: Ammonium transporter; PFAM: Ammonium transporter YP_005059624.1 KEGG: aba:Acid345_4445 nitrogen regulatory protein P-II, GlnB, GlnK; PFAM: Nitrogen regulatory protein PII; SMART: Nitrogen regulatory protein PII YP_005059625.1 KEGG: aca:ACP_2210 hypothetical protein YP_005059626.1 PFAM: Uncharacterised protein family UPF0102; KEGG: aca:ACP_1755 hypothetical protein YP_005059627.1 TIGRFAM: CTP synthase; KEGG: aca:ACP_2453 CTP synthetase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal YP_005059628.1 KEGG: bcm:Bcenmc03_4636 YadA domain-containing protein YP_005059629.1 KEGG: sus:Acid_0035 hypothetical protein YP_005059630.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: sus:Acid_0036 hypothetical protein YP_005059631.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: aba:Acid345_4012 hypothetical protein YP_005059632.1 PFAM: Tetratricopeptide TPR-1; KEGG: sus:Acid_2003 TPR repeat-containing protein YP_005059633.1 KEGG: sli:Slin_6557 hypothetical protein YP_005059634.1 KEGG: aca:ACP_2035 helicase, DEAD/DEAH domain protein; PFAM: DEAD/H associated; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal; ATPase, AAA+ type, core YP_005059635.1 PFAM: Cupin 2, conserved barrel; KEGG: rpt:Rpal_2960 cupin 2 conserved barrel domain protein YP_005059636.1 TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; KEGG: aba:Acid345_3769 phosphatase KdsC; PFAM: HAD superfamily hydrolase-like, type 3 YP_005059637.1 KEGG: pfs:PFLU2608 hypothetical protein YP_005059638.1 KEGG: aca:ACP_2229 hypothetical protein YP_005059639.1 PFAM: Protein of unknown function DUF457, transmembrane; KEGG: aca:ACP_2230 putative hydrolase YP_005059640.1 SMART: Ribonuclease II/R; RNA-binding domain, S1; Cold shock protein; TIGRFAM: Ribonuclease R, bacterial; Ribonuclease II/ribonuclease R, bacteria; KEGG: aca:ACP_2014 ribonuclease R; PFAM: Ribonuclease II/R; Ribosomal protein S1, RNA-binding domain; Ribonuclease B, N-terminal OB domain YP_005059641.1 KEGG: aca:ACP_2858 peptidase, M56 family/TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: Peptidase M56, BlaR1; TonB, C-terminal YP_005059642.1 PFAM: Penicillinase repressor; KEGG: aca:ACP_2859 MarR family transcriptional regulatory protein YP_005059643.1 PFAM: Beta-lactamase-related; KEGG: aca:ACP_3440 beta-lactamase YP_005059644.1 TIGRFAM: Ribosomal S1 synthesis/modification protein; PFAM: Ribosomal protein S1, RNA-binding domain; KEGG: aca:ACP_2317 ribosomal protein S1; SMART: RNA-binding domain, S1 YP_005059645.1 PFAM: Histidine triad (HIT) protein; KEGG: aca:ACP_1780 HIT domain protein YP_005059646.1 KEGG: azl:AZL_020220 hypothetical protein YP_005059647.1 KEGG: aca:ACP_2258 hypothetical protein YP_005059648.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: aca:ACP_2259 antibiotic biosynthesis monooxygenase domain protein YP_005059649.1 SMART: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase; KEGG: aca:ACP_2260 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase YP_005059650.1 PFAM: Protein of unknown function DUF1572; KEGG: rbi:RB2501_15129 hypothetical protein YP_005059651.1 KEGG: aca:ACP_0465 flippase domain protein YP_005059652.1 SMART: DNA glycosylase/AP lyase, catalytic domain; TIGRFAM: DNA glycosylase/AP lyase; KEGG: aca:ACP_2261 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; Zinc finger, DNA glycosylase/AP lyase/isoleucyl tRNA synthetase YP_005059653.1 TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: rlg:Rleg_0834 XRE family plasmid maintenance system antidote protein; SMART: Helix-turn-helix type 3 YP_005059654.1 PFAM: ROK; KEGG: aca:ACP_2379 hypothetical protein YP_005059655.1 KEGG: aca:ACP_2380 soluble pyridine nucleotide transhydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_005059656.1 PFAM: Thiamine monophosphate synthase; KEGG: aca:ACP_2381 putative thiamine-phosphate pyrophosphorylase YP_005059657.1 PFAM: FecR protein; KEGG: pol:Bpro_4325 putative prolin-rich exported protein YP_005059658.1 PFAM: NHL repeat; KEGG: cai:Caci_8646 NHL repeat containing protein YP_005059659.1 PFAM: NHL repeat; KEGG: cai:Caci_8646 NHL repeat containing protein YP_005059660.1 KEGG: aba:Acid345_2596 hypothetical protein YP_005059661.1 KEGG: aba:Acid345_2596 hypothetical protein YP_005059662.1 KEGG: aca:ACP_0347 ABC transporter, (putative) drug resistance ATPase-1 (drug RA1) family, ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core YP_005059663.1 KEGG: npu:Npun_F3675 multi-sensor signal transduction histidine kinase; PFAM: ATPase-like, ATP-binding domain; CHASE3; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; SMART: ATPase-like, ATP-binding domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059664.1 KEGG: aca:ACP_0497 response regulator; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005059665.1 TIGRFAM: PAS; PFAM: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain; KEGG: aca:ACP_0498 sensory box histidine kinase/response regulator; SMART: ATPase-like, ATP-binding domain; Signal transduction response regulator, receiver domain; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005059666.1 PFAM: Protein of unknown function DUF2237; KEGG: fra:Francci3_2396 hypothetical protein YP_005059667.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0537 hypothetical protein YP_005059668.1 KEGG: aca:ACP_1975 peptidase, S1C (protease Do) family; PFAM: Peptidase S1/S6, chymotrypsin/Hap; SMART: PDZ/DHR/GLGF YP_005059669.1 TIGRFAM: Dephospho-CoA kinase; KEGG: aca:ACP_1976 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_005059670.1 KEGG: aba:Acid345_4424 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_005059671.1 KEGG: aca:ACP_1978 hypothetical protein YP_005059672.1 KEGG: smt:Smal_3613 hypothetical protein YP_005059673.1 KEGG: aca:ACP_1925 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: Phospholipid biosynthesis protein, PlsX-like; PFAM: Fatty acid synthesis PlsX protein YP_005059674.1 KEGG: aca:ACP_1926 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; PFAM: Ribosomal protein L32p YP_005059675.1 PFAM: Protein of unknown function DUF177; KEGG: aca:ACP_1927 hypothetical protein YP_005059676.1 KEGG: rmr:Rmar_1279 iron (metal) dependent repressor, DtxR family; PFAM: Iron dependent repressor; Iron dependent repressor, N-terminal; SMART: Iron dependent repressor, diptheria toxin type YP_005059677.1 PFAM: Protein of unknown function DUF885; KEGG: aba:Acid345_0262 hypothetical protein YP_005059678.1 KEGG: aca:ACP_2008 hypothetical protein YP_005059679.1 KEGG: aca:ACP_2010 hypothetical protein YP_005059680.1 HAMAP: Bifunctional protein PyrR; KEGG: aca:ACP_2011 phosphoribosyl transferase domain protein; PFAM: Phosphoribosyltransferase YP_005059681.1 PFAM: Major facilitator superfamily MFS-1; KEGG: aba:Acid345_2643 major facilitator transporter YP_005059682.1 TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3; KEGG: aca:ACP_2207 addiction module antidote protein, HigA family; SMART: Helix-turn-helix type 3 YP_005059683.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aca:ACP_2136 biopolymer transport protein, ExbD/TolR family YP_005059684.1 KEGG: aca:ACP_2135 TPR domain protein YP_005059685.1 PFAM: Short-chain dehydrogenase/reductase SDR; KEGG: cwo:Cwoe_1065 short-chain dehydrogenase/reductase SDR YP_005059686.1 KEGG: aca:ACP_2254 transcriptional regulatory protein CpxR homolog; PFAM: Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain YP_005059687.1 KEGG: bpy:Bphyt_5273 putative phosphoketolase; PFAM: Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, N-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase, C-terminal; Xylulose 5-phosphate/Fructose 6-phosphate phosphoketolase YP_005059688.1 TIGRFAM: Acetate kinase; KEGG: bge:BC1002_3880 acetate kinase; PFAM: Acetate/butyrate kinase YP_005059689.1 KEGG: aca:ACP_1205 hypothetical protein YP_005059690.1 PFAM: Outer membrane efflux protein; KEGG: aca:ACP_1204 outer membrane efflux protein YP_005059691.1 KEGG: aca:ACP_1203 heavy metal efflux RND transporter, MFP subunit CusB; TIGRFAM: Secretion protein HlyD; PFAM: Secretion protein HlyD YP_005059692.1 KEGG: aca:ACP_1202 heavy metal efflux RND transporter CusA; TIGRFAM: Heavy metal efflux pump CzcA; PFAM: Acriflavin resistance protein YP_005059694.1 PFAM: Peptidase S41; WD40-like Beta Propeller; KEGG: sus:Acid_3719 peptidase S41 YP_005059695.1 KEGG: csc:Csac_1155 esterase/lipase-like protein YP_005059696.1 PFAM: Translation initiation factor 3, N-terminal; Translation initiation factor 3, C-terminal; manually curated; TIGRFAM: Translation initiation factor 3; KEGG: aca:ACP_2253 translation initiation factor IF-3; HAMAP: Translation initiation factor 3 YP_005059697.1 KEGG: scl:sce1827 hypothetical protein YP_005059698.1 KEGG: aca:ACP_2016 oxidoreductase, FAD/FMN-binding; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal YP_005059699.1 PFAM: Peptidase M50; KEGG: aba:Acid345_2595 peptidase M50 YP_005059700.1 KEGG: sbi:SORBI_10g012110 hypothetical protein YP_005059701.1 TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; KEGG: aca:ACP_1372 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase-related protein, C-terminal; AIR synthase-related protein YP_005059702.1 TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; KEGG: aca:ACP_2074 glutamate-1-semialdehyde aminotransferase; PFAM: Aminotransferase class-III YP_005059703.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aba:Acid345_0151 biopolymer transport protein ExbD/TolR YP_005059704.1 PFAM: Biopolymer transport protein ExbD/TolR; KEGG: aca:ACP_2137 transport energizing protein, ExbD/TolR family YP_005059705.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: aca:ACP_2138 transporter, MotA/TolQ/ExbB proton channel family YP_005059706.1 KEGG: aca:ACP_2139 TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005059707.1 KEGG: aca:ACP_2140 protein-export membrane protein SecF; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal YP_005059708.1 KEGG: aca:ACP_2141 protein-export membrane protein SecD; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein, bacteria; PFAM: Preprotein translocase, SecD/SecF/SecDF; SecD/SecF/SecDF export membrane protein, GG motif, N-terminal YP_005059709.1 KEGG: aba:Acid345_0145 protein translocase subunit YajC; TIGRFAM: Preprotein translocase YajC; PFAM: Preprotein translocase YajC YP_005059710.1 KEGG: cwo:Cwoe_0841 NHL repeat containing protein YP_005059711.1 KEGG: aca:ACP_2943 multidrug resistance protein B; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005059712.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_2942 transcriptional regulator, TetR family YP_005059713.1 KEGG: llo:LLO_1664 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain YP_005059714.1 manually curated; KEGG: pfh:PFHG_01831 conserved hypothetical protein YP_005059715.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: aca:ACP_0799 putative excinuclease ABC YP_005059716.1 KEGG: sus:Acid_0348 MATE efflux family protein; TIGRFAM: Multi antimicrobial extrusion protein; PFAM: Multi antimicrobial extrusion protein YP_005059717.1 KEGG: tps:THAPSDRAFT_6086 hypothetical protein YP_005059718.1 KEGG: aca:ACP_3100 hypothetical protein YP_005059719.1 PFAM: Flavodoxin-like fold; KEGG: aca:ACP_3099 acyl carrier protein phosphodiesterase YP_005059720.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_3098 transcriptional regulator, TetR family YP_005059721.1 KEGG: sye:Syncc9902_1274 hypothetical protein YP_005059722.1 KEGG: bmj:BMULJ_04722 plasmid stability protein-like protein YP_005059723.1 PFAM: PilT protein, N-terminal; KEGG: pna:Pnap_4764 PilT domain-containing protein YP_005059724.1 TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; KEGG: aca:ACP_2154 tRNA-guanine transglycosylase; PFAM: Queuine/other tRNA-ribosyltransferase YP_005059725.1 KEGG: aba:Acid345_4399 hypothetical protein YP_005059726.1 KEGG: aca:ACP_2401 hypothetical protein YP_005059727.1 manually curated; TIGRFAM: RNA polymerase sigma-70; KEGG: aca:ACP_2402 RNA polymerase sigma-70 factor, ECF family; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005059728.1 KEGG: aca:ACP_0978 hypothetical protein YP_005059729.1 PFAM: Protein of unknown function DUF1597; KEGG: xal:XALc_2834 hypothetical protein YP_005059730.1 KEGG: aca:ACP_2717 hypothetical protein YP_005059731.1 PFAM: Polyketide cyclase/dehydrase; KEGG: sus:Acid_0961 hypothetical protein YP_005059732.1 KEGG: aca:ACP_2650 ribosomal protein L11 methyltransferase; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; PFAM: Methyltransferase small YP_005059733.1 KEGG: rlg:Rleg_6743 hypothetical protein YP_005059734.1 KEGG: aca:ACP_2846 serine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase YP_005059735.1 PFAM: Protein of unknown function DUF2048; KEGG: aca:ACP_2051 hypothetical protein YP_005059736.1 KEGG: nde:NIDE2144 putative transcriptional regulator; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3 YP_005059737.1 PFAM: Protein of unknown function DUF891; KEGG: ava:Ava_4644 hypothetical protein YP_005059738.1 PFAM: Alanine racemase, N-terminal; Alanine racemase, C-terminal; TIGRFAM: Alanine racemase; HAMAP: Alanine racemase; KEGG: aca:ACP_2160 alanine racemase YP_005059739.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: ank:AnaeK_1383 peptidase U62 modulator of DNA gyrase YP_005059740.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: sus:Acid_5819 peptidase U62, modulator of DNA gyrase YP_005059741.1 PFAM: Peptidase M48; KEGG: aca:ACP_2851 peptidase, M48 family YP_005059742.1 PFAM: Histidine triad (HIT) protein; KEGG: aca:ACP_2075 histidine triad family protein YP_005059743.1 TIGRFAM: Peptide methionine sulphoxide reductase MsrA; KEGG: aba:Acid345_3735 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA YP_005059744.1 KEGG: clj:CLJU_c22270 hypothetical protein YP_005059745.1 PFAM: Patatin/Phospholipase A2-related; KEGG: aba:Acid345_4068 patatin YP_005059746.1 PFAM: Metallo-dependent phosphatase; KEGG: aca:ACP_2298 Ser/Thr protein phosphatase family protein YP_005059747.1 PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: aca:ACP_2398 oligopeptide ABC transporter, peptide/opine/nickel uptake transporter (PepT) family, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005059748.1 KEGG: oaa:100091404 similar to ifapsoriasin YP_005059749.1 KEGG: pla:Plav_1074 luciferase family protein; TIGRFAM: Luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup YP_005059750.1 PFAM: Protein of unknown function DUF2167, membrane; KEGG: bge:BC1002_0432 protein of unknown function DUF2167, membrane YP_005059751.1 KEGG: bph:Bphy_5880 citrate transporter YP_005059752.1 KEGG: aba:Acid345_2824 geranylgeranyl reductase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; PFAM: Monooxygenase, FAD-binding YP_005059753.1 KEGG: aca:ACP_2155 Cna protein B-type domain protein YP_005059754.1 KEGG: aca:ACP_2159 GTPase ObgE; TIGRFAM: GTP-binding protein Obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related YP_005059755.1 KEGG: avn:Avin_08210 hypothetical protein YP_005059756.1 KEGG: aca:ACP_0939 metallo-beta-lactamase family protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005059757.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aba:Acid345_0168 TetR family transcriptional regulator YP_005059758.1 PFAM: Polyketide cyclase/dehydrase; KEGG: saq:Sare_2473 hypothetical protein YP_005059759.1 KEGG: nda:Ndas_5190 hypothetical protein YP_005059760.1 KEGG: sfx:S3178 serine protease precurser YP_005059761.1 KEGG: aca:ACP_1766 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase YP_005059762.1 TIGRFAM: Gamma-glutamyl phosphate reductase GPR; KEGG: cyj:Cyan7822_5466 gamma-glutamyl phosphate reductase; PFAM: Aldehyde dehydrogenase domain YP_005059763.1 KEGG: lca:LSEI_2358 glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase/delta-1-pyrroline-5-carboxylate synthase; PFAM: Aspartate/glutamate/uridylate kinase YP_005059764.1 TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; KEGG: aca:ACP_1767 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA YP_005059765.1 KEGG: aca:ACP_1768 chorismate mutase; PFAM: Chorismate mutase, type II; SMART: Chorismate mutase YP_005059766.1 TIGRFAM: Tryptophan synthase, alpha chain; KEGG: aca:ACP_1769 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain YP_005059767.1 TIGRFAM: Tryptophan synthase, beta chain; KEGG: aca:ACP_1770 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit YP_005059768.1 KEGG: dgr:Dgri_GH12961 GH12961 gene product from transcript GH12961-RA YP_005059769.1 PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); KEGG: aca:ACP_1771 N-(5'phosphoribosyl)anthranilate isomerase YP_005059770.1 PFAM: Domain of unknown function DUF820; KEGG: sus:Acid_5455 hypothetical protein YP_005059771.1 KEGG: aca:ACP_1772 indole-3-glycerol phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_005059772.1 TIGRFAM: Aconitase/iron regulatory protein 2; KEGG: aca:ACP_2022 aconitate hydratase 1; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel YP_005059773.1 KEGG: ttm:Tthe_0253 Mn2+/Fe2+ transporter, NRAMP family; TIGRFAM: Natural resistance-associated macrophage protein; PFAM: Natural resistance-associated macrophage protein YP_005059774.1 KEGG: aca:ACP_2746 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; PFAM: Ribosomal protein L27 YP_005059775.1 KEGG: aca:ACP_2747 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; PFAM: Ribosomal protein L21 YP_005059776.1 KEGG: aca:ACP_1799 hypothetical protein YP_005059777.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: aca:ACP_1798 NAD dependent epimerase/dehydratase family protein YP_005059778.1 KEGG: aca:ACP_1799 hypothetical protein YP_005059779.1 PFAM: ABC transporter-like; KEGG: rce:RC1_1686 ABC transporter, ATP-binding protein, putative; SMART: ATPase, AAA+ type, core YP_005059780.1 KEGG: mxa:MXAN_4075 hypothetical protein YP_005059781.1 KEGG: sus:Acid_0414 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase; PFAM: DeoxyUTP pyrophosphatase domain YP_005059782.1 KEGG: rca:Rcas_2471 hypothetical protein YP_005059783.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: rlt:Rleg2_0480 transcriptional regulator, TetR family YP_005059784.1 KEGG: bja:bll0271 hypothetical protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005059785.1 KEGG: aca:ACP_2646 metallo-beta-lactamase family protein; PFAM: Beta-lactamase-like; SMART: Beta-lactamase-like YP_005059786.1 KEGG: aca:ACP_2256 hypothetical protein YP_005059787.1 TIGRFAM: Ribosomal protein S21; HAMAP: Ribosomal protein S21; KEGG: aca:ACP_2257 30S ribosomal protein S21; PFAM: Ribosomal protein S21 YP_005059788.1 manually curated; KEGG: aca:ACP_1827 transferase hexapeptide domain protein YP_005059789.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: vap:Vapar_4999 glyoxalase/bleomycin resistance protein/dioxygenase YP_005059790.1 PFAM: Transglutaminase-like; KEGG: aba:Acid345_3005 TPR repeat-containing protein YP_005059791.1 PFAM: Ferritin/Dps protein; KEGG: aca:ACP_3404 bacterioferritin family protein YP_005059792.1 KEGG: mmx:MmarC6_0142 chymotrypsin serine protease YP_005059793.1 KEGG: rxy:Rxyl_0243 hypothetical protein YP_005059794.1 KEGG: rca:Rcas_0024 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005059795.1 KEGG: ami:Amir_1073 bifunctional preprotein translocase subunit SecD/SecF YP_005059796.1 TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; KEGG: aca:ACP_2348 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Anticodon-binding YP_005059797.1 PFAM: Protein of unknown function DUF1287; KEGG: ccs:CCNA_01443 hypothetical protein YP_005059798.1 TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; KEGG: aca:ACP_2346 aspartate--tRNA ligase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type YP_005059799.1 KEGG: sen:SACE_4661 4-oxalocrotonate tautomerase YP_005059800.1 PFAM: Peptidase S54, rhomboid domain; KEGG: aca:ACP_1823 peptidase S54 (rhomboid) family protein, nonpeptidase homolog YP_005059801.1 PFAM: Peptidase M28; KEGG: aba:Acid345_4664 peptidase M28 YP_005059802.1 KEGG: aca:ACP_1825 hypothetical protein YP_005059803.1 manually curated; KEGG: aca:ACP_1826 hypothetical protein YP_005059804.1 KEGG: aca:ACP_1813 ImpB/MucB/SamB family protein; PFAM: DNA-repair protein, UmuC-like YP_005059805.1 PFAM: RDD; KEGG: pat:Patl_2514 RDD domain-containing protein YP_005059806.1 PFAM: ABC transporter-like; KEGG: aca:ACP_1075 ABC transporter, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005059807.1 PFAM: ABC-2 type transporter; KEGG: aca:ACP_1074 ABC transporter, permease protein YP_005059808.1 KEGG: aca:ACP_1073 histidine kinase domain protein; PFAM: Signal transduction histidine kinase, subgroup 3, dimerisation and phosphoacceptor domain; ATPase-like, ATP-binding domain; SMART: ATPase-like, ATP-binding domain YP_005059809.1 KEGG: aca:ACP_1072 DNA-binding response regulator; PFAM: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal; SMART: Signal transduction response regulator, receiver domain; Transcription regulator LuxR, C-terminal YP_005059810.1 KEGG: ote:Oter_2388 glutamyl-tRNA synthetase class Ic; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_005059811.1 KEGG: bpy:Bphyt_7382 putative secreted protein YP_005059812.1 PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; KEGG: sus:Acid_0469 peptidase S9B dipeptidylpeptidase IV subunit YP_005059813.1 SMART: Cysteinyl-tRNA synthetase, class Ia, DALR; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; KEGG: aca:ACP_2220 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia; Cysteinyl-tRNA synthetase, class Ia, DALR YP_005059815.1 KEGG: xca:xccb100_0238 hypothetical protein YP_005059816.1 PFAM: Uncharacterised protein family UPF0175; KEGG: met:M446_2313 hypothetical protein YP_005059817.1 PFAM: Drug/metabolite transporter; KEGG: aca:ACP_2219 membrane protein YP_005059818.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_2151 Cna protein B-type domain protein YP_005059819.1 KEGG: bcq:BCQ_2300 drug resistance transporter, EmrB/QacA family YP_005059820.1 KEGG: sus:Acid_5699 electron transfer flavoprotein, alpha subunit; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal YP_005059821.1 KEGG: aca:ACP_0764 electron transfer flavoprotein, beta subunit; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SMART: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal YP_005059822.1 PFAM: NHL repeat; Two component regulator propeller; KEGG: aca:ACP_1177 hypothetical protein YP_005059823.1 KEGG: syg:sync_2679 enantiomer-selective amidase; PFAM: Amidase YP_005059824.1 KEGG: pop:POPTR_572938 hypothetical protein YP_005059825.1 KEGG: fba:FIC_01633 hypothetical protein YP_005059826.1 KEGG: bba:Bd1800 hypothetical protein YP_005059827.1 PFAM: Divalent ion symporter; KEGG: aca:ACP_2262 arsenical pump membrane protein YP_005059828.1 PFAM: Major facilitator superfamily MFS-1; KEGG: srt:Srot_0094 major facilitator superfamily protein YP_005059829.1 PFAM: Cysteine-rich domain; KEGG: aca:ACP_0763 putative iron-sulfur cluster binding protein YP_005059830.1 KEGG: dda:Dd703_4020 putative inner membrane protein YP_005059831.1 KEGG: aca:ACP_2938 hypothetical protein YP_005059832.1 KEGG: aca:ACP_2940 hypothetical protein YP_005059833.1 PFAM: Protein of unknown function DUF541; KEGG: aca:ACP_2597 hypothetical protein YP_005059834.1 PFAM: Peptidase M50; KEGG: aca:ACP_2594 peptidase, M50B family YP_005059835.1 KEGG: cpi:Cpin_3136 short-chain dehydrogenase/reductase SDR; PFAM: Short-chain dehydrogenase/reductase SDR YP_005059836.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sus:Acid_2973 glyoxalase/bleomycin resistance protein/dioxygenase YP_005059837.1 PFAM: Xylose isomerase, TIM barrel domain; KEGG: aba:Acid345_1695 sugar phosphate isomerases/epimerases YP_005059838.1 PFAM: Xylose isomerase, TIM barrel domain; AP endonuclease, family 2, C-terminal; KEGG: gtn:GTNG_2013 hypothetical protein YP_005059839.1 PFAM: O-methyltransferase, family 3; KEGG: sno:Snov_2332 O-methyltransferase family 3 YP_005059840.1 TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; KEGG: aba:Acid345_3860 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib YP_005059841.1 PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; KEGG: aca:ACP_2591 segregation and condensation protein A YP_005059842.1 PFAM: Protein of unknown function DUF3532; KEGG: cyj:Cyan7822_1444 hypothetical protein YP_005059843.1 manually curated; KEGG: met:M446_7005 hypothetical protein YP_005059844.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: sus:Acid_5131 GCN5-related N-acetyltransferase YP_005059845.1 KEGG: sti:Sthe_0834 thioesterase superfamily protein; TIGRFAM: Phenylacetic acid degradation-related protein; PFAM: Thioesterase superfamily YP_005059846.1 PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; KEGG: aba:Acid345_4637 LysR family transcriptional regulator YP_005059847.1 KEGG: aca:ACP_2515 alpha amylase family protein; PFAM: Glycosyl hydrolase, family 13, catalytic domain; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic domain YP_005059848.1 PFAM: NADP-dependent oxidoreductase domain; KEGG: aba:Acid345_2253 aldo/keto reductase YP_005059849.1 PFAM: Purine nucleoside permease; KEGG: cja:CJA_0573 putative purine nucleoside permease YP_005059850.1 KEGG: bge:BC1002_0615 hypothetical protein YP_005059851.1 PFAM: Cation/H+ exchanger; KEGG: sml:Smlt1521 putative transmembrane Na+/H+ exchanger family transporter protein YP_005059852.1 KEGG: mlo:mll0858 hypothetical protein; PFAM: Monooxygenase, FAD-binding YP_005059853.1 KEGG: vap:Vapar_1354 Appr-1-p processing domain protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing YP_005059854.1 PFAM: Phosphate transporter; KEGG: bge:BC1002_4579 phosphate transporter YP_005059855.1 KEGG: aba:Acid345_2313 hypothetical protein YP_005059856.1 PFAM: Acyltransferase 3; KEGG: aca:ACP_2950 putative acyltransferase YP_005059857.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: sli:Slin_5049 inosine/uridine-preferring nucleoside hydrolase YP_005059858.1 KEGG: aca:ACP_2949 uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; PFAM: Aspartate/glutamate/uridylate kinase YP_005059859.1 KEGG: ttr:Tter_2128 ApbE family lipoprotein YP_005059860.1 KEGG: hau:Haur_1518 coagulation factor 5/8 type domain-containing protein YP_005059861.1 KEGG: aca:ACP_2115 hypothetical protein; TIGRFAM: Protein of unknown function DUF124; PFAM: Protein of unknown function DUF124 YP_005059862.1 KEGG: sus:Acid_6361 hypothetical protein YP_005059863.1 PFAM: Dienelactone hydrolase; KEGG: rmr:Rmar_2600 carboxymethylenebutenolidase YP_005059864.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: aca:ACP_2951 putative lipoprotein YP_005059865.1 PFAM: Lactonase, 7-bladed beta propeller; KEGG: aca:ACP_2952 hypothetical protein YP_005059866.1 KEGG: aca:ACP_2953 peptidase, M13 family; PFAM: Peptidase M13; Peptidase M13, neprilysin, C-terminal YP_005059868.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: afw:Anae109_1540 glyoxalase/bleomycin resistance protein/dioxygenase YP_005059869.1 PFAM: Mammalian cell entry-related; KEGG: aca:ACP_2954 Mce family protein YP_005059870.1 KEGG: aba:Acid345_4518 4'-phosphopantetheinyl transferase; TIGRFAM: Holo-[acyl carrier protein] synthase; Phosphopantethiene-protein transferase; PFAM: 4'-phosphopantetheinyl transferase YP_005059871.1 PFAM: ABC transporter-like; KEGG: aca:ACP_2560 efflux ABC transporter, lipoprotein translocase (LPT) family, ATP-binding protein; SMART: ATPase, AAA+ type, core YP_005059872.1 KEGG: aca:ACP_2139 TonB domain protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005059873.1 KEGG: sus:Acid_6583 hypothetical protein YP_005059874.1 KEGG: aca:ACP_2446 putative lipoprotein YP_005059875.1 TIGRFAM: Adenosylhomocysteinase; KEGG: sus:Acid_5273 S-adenosyl-L-homocysteine hydrolase; PFAM: Adenosylhomocysteinase; S-adenosyl-L-homocysteine hydrolase, NAD binding YP_005059876.1 TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; Ada DNA repair, metal-binding; HTH transcriptional regulator, AraC; Methylguanine DNA methyltransferase, ribonuclease-like; KEGG: azl:AZL_a05180 methylated-DNA-[protein]-cysteine S-methyltransferase; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005059877.1 KEGG: gbe:GbCGDNIH1_1338 transglutaminase-like enzymes, putative cysteine proteases; PFAM: Transglutaminase-like; SMART: Transglutaminase-like YP_005059878.1 PFAM: S-adenosylmethionine synthetase, C-terminal; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal; TIGRFAM: S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthetase; KEGG: aba:Acid345_3661 S-adenosylmethionine synthetase YP_005059879.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_6153 TonB-dependent receptor, plug YP_005059881.1 KEGG: aca:ACP_1489 hypothetical protein YP_005059882.1 KEGG: aba:Acid345_3660 hypothetical protein YP_005059883.1 PFAM: Acyltransferase 3; KEGG: mxa:MXAN_7325 acyltransferase family protein YP_005059884.1 KEGG: pca:Pcar_1799 hypothetical protein YP_005059885.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aca:ACP_1853 permease subunit of a ABC-type transport system involved in lipoprotein release, putative YP_005059886.1 KEGG: svi:Svir_06020 protein of unknown function (DUF2029) YP_005059887.1 KEGG: rrs:RoseRS_3908 hypothetical protein YP_005059888.1 KEGG: lbl:LBL_2410 hypothetical protein YP_005059889.1 PFAM: Acyltransferase 3; KEGG: hdn:Hden_1351 acyltransferase 3 YP_005059890.1 KEGG: aca:ACP_0488 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005059891.1 KEGG: aba:Acid345_3525 Cna B-type protein YP_005059892.1 KEGG: aca:ACP_2944 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; PFAM: Ribosomal protein L13 YP_005059893.1 PFAM: Ribosomal protein S9; KEGG: aca:ACP_2945 ribosomal protein S9 YP_005059894.1 KEGG: aca:ACP_2946 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid; PFAM: Ribosomal protein S2 YP_005059895.1 KEGG: aca:ACP_2947 elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal YP_005059896.1 PFAM: Uncharacterised protein family UPF0027; KEGG: hau:Haur_0812 hypothetical protein YP_005059897.1 KEGG: ter:Tery_3571 signal transduction protein YP_005059898.1 KEGG: mgm:Mmc1_1776 ribonuclease E YP_005059899.1 KEGG: saq:Sare_0720 glycosyl transferase family protein YP_005059900.1 KEGG: ent:Ent638_4230 hypothetical protein YP_005059901.1 TIGRFAM: VWFA-related, acidobacterial-type; KEGG: aba:Acid345_4012 hypothetical protein YP_005059902.1 PFAM: Transglycosylase-associated protein; KEGG: bpy:Bphyt_4801 transglycosylase-associated protein YP_005059903.1 TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; KEGG: aca:ACP_2344 2-dehydro-3-deoxyphosphooctonate aldolase; PFAM: DAHP synthetase I/KDSA YP_005059904.1 KEGG: aca:ACP_1821 hypothetical protein YP_005059905.1 PFAM: IstB-like ATP-binding protein; KEGG: aca:ACP_1819 primosomal protein DnaI YP_005059906.1 KEGG: reu:Reut_B5490 ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit YP_005059907.1 KEGG: aav:Aave_4775 ethanolamine ammonia-lyase small subunit; PFAM: Ethanolamine ammonia-lyase light chain YP_005059908.1 KEGG: rce:RC1_0589 cobalamin synthesis protein CobW, putative; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal; SMART: Cobalamin (vitamin B12) biosynthesis CobW-like, C-terminal YP_005059909.1 KEGG: aca:ACP_3082 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; PFAM: Ribosomal protein L31 YP_005059910.1 PFAM: tRNA-dihydrouridine synthase; KEGG: aca:ACP_3084 putative tRNA-dihydrouridine synthase YP_005059911.1 KEGG: ttj:TTHB006 hypothetical protein YP_005059912.1 PFAM: Protein of unknown function DUF497; KEGG: ttj:TTHB007 hypothetical protein YP_005059913.1 KEGG: aca:ACP_3083 hypothetical protein YP_005059914.1 KEGG: aca:ACP_2627 hypothetical protein YP_005059915.1 PFAM: Domain of unknown function DUF1906; KEGG: aca:ACP_2937 hypothetical protein YP_005059916.1 PFAM: Acyltransferase 3; KEGG: xac:XAC3920 acyltransferase YP_005059917.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: aca:ACP_2626 TldD protein YP_005059918.1 KEGG: azc:AZC_3924 hypothetical protein YP_005059919.1 PFAM: Peptidase U62, modulator of DNA gyrase; KEGG: aba:Acid345_4760 microcin-processing peptidase 1 YP_005059920.1 KEGG: aca:ACP_2624 excinuclease ABC, C subunit homolog YP_005059921.1 PFAM: Oxidoreductase, N-terminal; KEGG: bps:BPSL1869 putative oxidoreductase YP_005059922.1 KEGG: sus:Acid_0667 EmrB/QacA family drug resistance transporter; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005059923.1 TIGRFAM: Ribulose-phosphate 3-epimerase; KEGG: aca:ACP_2585 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase YP_005059924.1 TIGRFAM: Outer membrane assembly lipoprotein YfiO; KEGG: aca:ACP_2584 tetratricopeptide repeat protein YP_005059925.1 TIGRFAM: Valyl-tRNA synthetase; KEGG: aca:ACP_2583 valine--tRNA ligase YP_005059926.1 PFAM: Metallo-dependent phosphatase; KEGG: bge:BC1002_4261 metallophosphoesterase YP_005059927.1 KEGG: aba:Acid345_0135 biotin--acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal YP_005059928.1 TIGRFAM: Type III pantothenate kinase; KEGG: aba:Acid345_0136 pantothenate kinase; PFAM: Type III pantothenate kinase YP_005059929.1 KEGG: aca:ACP_2579 hypothetical protein YP_005059930.1 PFAM: (Uracil-5)-methyltransferase; KEGG: aca:ACP_2578 23S rRNA (uracil-5-)-methyltransferase YP_005059931.1 TIGRFAM: Competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; Beta-lactamase-like; KEGG: aca:ACP_2577 DNA internalization-related competence protein ComEC/Rec2; SMART: Beta-lactamase-like YP_005059932.1 KEGG: aba:Acid345_4724 hypothetical protein YP_005059933.1 PFAM: TonB-dependent receptor, plug; KEGG: aca:ACP_0561 hypothetical protein YP_005059934.1 PFAM: Exosortase EpsH-related; KEGG: nde:NIDE2403 hypothetical protein YP_005059936.1 KEGG: ots:OTBS_0787 hypothetical protein YP_005059937.1 KEGG: pmr:PMI1480 ABC transporter, substrate binding protein YP_005059938.1 KEGG: dze:Dd1591_4066 16S rRNA m(2)G966-methyltransferase YP_005059939.1 KEGG: cai:Caci_7497 glycoside hydrolase family 2 sugar binding YP_005059940.1 KEGG: sgr:SGR_3091 putative 4-coumarate:CoA ligase YP_005059941.1 KEGG: tad:TRIADDRAFT_52022 hypothetical protein YP_005059942.1 KEGG: vap:Vapar_3947 glycosyl transferase family 2 YP_005059943.1 KEGG: rcu:RCOM_1852770 Extracellular protease precursor, putative YP_005059945.1 KEGG: ppr:PBPRA1470 hypothetical protein YP_005059946.1 KEGG: dwi:Dwil_GK11913 GK11913 gene product from transcript GK11913-RA YP_005059947.1 manually curated; KEGG: gtn:GTNG_2186 hypothetical protein YP_005059948.1 KEGG: son:SO_4053 methyl-accepting chemotaxis protein YP_005059949.1 KEGG: aap:NT05HA_0674 B12-dependent methionine synthase YP_005059950.1 KEGG: scl:sce6784 hypothetical protein YP_005059951.1 KEGG: tdn:Suden_0939 HipA-like-like YP_005059952.1 KEGG: ppg:PputGB1_1005 TonB-dependent hemoglobin/transferrin/lactoferrin family receptor YP_005059953.1 KEGG: cpi:Cpin_5894 rhs element Vgr protein; TIGRFAM: Rhs element Vgr protein; PFAM: Phage baseplate assembly protein V; Phage late control D YP_005059955.1 KEGG: phu:Phum_PHUM515720 mitotic checkpoint protein BUB3, putative YP_005059956.1 KEGG: pha:PSHAa0132 hydrolase YP_005059957.1 PFAM: Glycosyl hydrolase, family 88; KEGG: aca:ACP_0551 glycosyl hydrolase family 88 protein YP_005059958.1 TIGRFAM: Glucokinase; KEGG: aca:ACP_2282 glucokinase; PFAM: Glucokinase YP_005059959.1 TIGRFAM: 6-phosphogluconolactonase, DevB-type; KEGG: aca:ACP_2281 6-phosphogluconolactonase; PFAM: Glucosamine/galactosamine-6-phosphate isomerase YP_005059960.1 TIGRFAM: Glucose-6-phosphate dehydrogenase; KEGG: aca:ACP_2280 glucose-6-phosphate dehydrogenase; PFAM: Glucose-6-phosphate dehydrogenase, C-terminal; Glucose-6-phosphate dehydrogenase, NAD-binding YP_005059961.1 TIGRFAM: 6-phosphogluconate dehydrogenase-related protein; KEGG: aca:ACP_2279 6-phosphogluconate dehydrogenase-like protein; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; 6-phosphogluconate dehydrogenase, C-terminal YP_005059962.1 KEGG: bxe:Bxe_A2674 short chain dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR YP_005059963.1 TIGRFAM: Ribose 5-phosphate isomerase, type A; KEGG: azc:AZC_2358 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase, type A YP_005059964.1 SMART: Transketolase-like, pyrimidine-binding domain; TIGRFAM: Transketolase, bacterial-like; KEGG: aca:ACP_2276 transketolase; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal YP_005059965.1 KEGG: oca:OCAR_5411 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005059966.1 KEGG: rsc:RCFBP_11426 hypothetical protein YP_005059967.1 KEGG: pfo:Pfl01_1950 glyoxalase/bleomycin resistance protein/dioxygenase YP_005059968.1 KEGG: aca:ACP_2274 putative glucan 1,4-alpha-glucosidase; PFAM: Glucodextranase N; Glycoside hydrolase 15-related YP_005059969.1 KEGG: aca:ACP_2273 superoxide dismutase, Mn; PFAM: Manganese/iron superoxide dismutase, C-terminal; Manganese/iron superoxide dismutase, N-terminal YP_005059970.1 KEGG: pno:SNOG_12834 hypothetical protein YP_005059971.1 KEGG: bgr:Bgr_p00260 plasmid maintenance system antidote protein; TIGRFAM: Addiction module antidote protein, HigA; PFAM: Helix-turn-helix type 3 YP_005059972.1 KEGG: nfa:nfa39430 hypothetical protein YP_005059973.1 KEGG: aca:ACP_2631 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal YP_005059974.1 PFAM: Domain of unknown function DUF404; Domain of unknown function DUF407; KEGG: aba:Acid345_3320 hypothetical protein YP_005059975.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase domain; KEGG: min:Minf_0628 inosine-uridine nucleoside N-ribohydrolase YP_005059976.1 PFAM: Domain of unknown function DUF403; KEGG: aba:Acid345_3319 hypothetical protein YP_005059977.1 KEGG: aba:Acid345_3318 transglutaminase-like; PFAM: Bacterial transglutaminase-like, N-terminal; Transglutaminase-like; SMART: Transglutaminase-like YP_005059978.1 KEGG: psa:PST_1685 hypothetical protein; PFAM: Rhodanese-like; SMART: Rhodanese-like YP_005059979.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: aca:ACP_1402 transcriptional regulatory protein YP_005059980.1 PFAM: Isochorismatase-like; KEGG: aca:ACP_1403 isochorismatase family protein YP_005059981.1 KEGG: gdj:Gdia_2404 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005059982.1 PFAM: Domain of unknown function DUF214, ABC transporter permease; KEGG: aca:ACP_2648 efflux ABC transporter, macrolide exporter (MacB) family, permease protein YP_005059983.1 KEGG: sus:Acid_7196 hypothetical protein YP_005059984.1 KEGG: sus:Acid_7195 hypothetical protein YP_005059985.1 KEGG: mmr:Mmar10_2545 hypothetical protein YP_005059986.1 KEGG: aca:ACP_2064 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal YP_005059987.1 KEGG: aba:Acid345_4536 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; PFAM: Ribosomal protein S18 YP_005059988.1 KEGG: aca:ACP_2066 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; PFAM: Ribosomal protein S6 YP_005059989.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; KEGG: aba:Acid345_4538 peptidyl-tRNA hydrolase YP_005059990.1 KEGG: aca:ACP_2068 ribosomal protein L25, Ctc-form; TIGRFAM: Ribosomal protein L25, long-form; PFAM: Ribosomal protein L25, short-form YP_005059991.1 TIGRFAM: Phosphoribosyl pyrophosphokinase; KEGG: aca:ACP_2069 ribose-phosphate pyrophosphokinase family protein; PFAM: Phosphoribosyltransferase YP_005059992.1 KEGG: aca:ACP_2071 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal YP_005059993.1 PFAM: Domain of unknown function DUF820; KEGG: sus:Acid_1913 hypothetical protein YP_005059994.1 TIGRFAM: FkbH domain; HAD-superfamily phosphatase, subfamily IIIC; KEGG: psa:PST_2876 enzyme involved in methoxymalonyl-ACP biosynthesis YP_005059995.1 KEGG: zmn:Za10_0489 prolyl oligopeptidase YP_005059996.1 KEGG: aca:ACP_0488 TonB family protein; TIGRFAM: TonB, C-terminal; PFAM: TonB, C-terminal YP_005059997.1 KEGG: aba:Acid345_0587 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005059998.1 KEGG: aca:ACP_1971 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005059999.1 PFAM: Transcription regulator, TetR-like, DNA-binding, bacterial/archaeal; KEGG: vap:Vapar_3720 transcriptional regulator, TetR family YP_005060000.1 PFAM: Peptidase S10, serine carboxypeptidase; KEGG: aca:ACP_0546 serine carboxypeptidase family protein YP_005060001.1 PFAM: Protein of unknown function DUF885; KEGG: xca:xccb100_1758 hypothetical protein YP_005060002.1 manually curated; TIGRFAM: Glycogen synthase, corynebacterial; KEGG: chl:Chy400_3319 glycogen synthase; PFAM: Glycosyl transferase, group 1 YP_005060003.1 KEGG: cyh:Cyan8802_2163 transaldolase/EF-hand domain-containing protein; TIGRFAM: Transaldolase 1; PFAM: Transaldolase YP_005060004.1 PFAM: Protein of unknown function DUF2029; KEGG: dol:Dole_1869 hypothetical protein YP_005060005.1 PFAM: Glycosyl transferase, family 2; KEGG: azl:AZL_008870 glycosyl transferase family 2 YP_005060006.1 PFAM: CopG-like DNA-binding; KEGG: gca:Galf_1420 hypothetical protein YP_005060007.1 PFAM: Plasmid stabilisation system; KEGG: gca:Galf_1421 plasmid stabilization system YP_005060008.1 KEGG: rlg:Rleg_2764 hypothetical protein YP_005060009.1 KEGG: bph:Bphy_1686 hypothetical protein YP_005060010.1 KEGG: afv:AFLA_085810 OPT peptide transporter Mtd1, putative YP_005060011.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: dra:DR_0374 hypothetical protein YP_005060012.1 TIGRFAM: Heat shock protein HslU; PFAM: ATPase, AAA-2; ATPase, AAA-type, core; Clp ATPase, C-terminal; KEGG: aca:ACP_2657 ATP-dependent protease ATP-binding subunit HslU; SMART: ATPase, AAA+ type, core YP_005060013.1 KEGG: aba:Acid345_2105 hypothetical protein YP_005060014.1 TIGRFAM: ATP-dependent protease, HslV subunit; HAMAP: ATP-dependent protease, HslV subunit; KEGG: aca:ACP_2656 ATP-dependent protease peptidase subunit; PFAM: Proteasome, subunit alpha/beta YP_005060015.1 KEGG: aca:ACP_2655 hypothetical protein YP_005060016.1 PFAM: Peptidase M28; Protease-associated domain, PA; KEGG: aba:Acid345_0806 peptidase M28 YP_005060017.1 KEGG: aca:ACP_2019 A/G-specific adenine glycosylase, putative; PFAM: HhH-GPD domain; Helix-hairpin-helix motif; SMART: HhH-GPD domain; Helix-hairpin-helix DNA-binding motif, class 1; Endonuclease III-like, iron-sulphur cluster loop motif YP_005060018.1 KEGG: cai:Caci_8646 NHL repeat containing protein YP_005060019.1 KEGG: npu:Npun_F0403 SH3 type 3 domain-containing protein YP_005060020.1 KEGG: aba:Acid345_4044 aldo/keto reductase; PFAM: NADP-dependent oxidoreductase domain YP_005060021.1 PFAM: Protein of unknown function DUF72; KEGG: mch:Mchl_1478 protein of unknown function DUF72 YP_005060022.1 KEGG: aca:ACP_1971 drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1 YP_005060023.1 KEGG: aba:Acid345_3787 HAD family hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase-like hydrolase YP_005060024.1 PFAM: Protein of unknown function DUF164; KEGG: sus:Acid_0817 hypothetical protein YP_005060025.1 KEGG: bcl:ABC0323 5'(3')-deoxyribonucleotidase YP_005060026.1 KEGG: aca:ACP_2634 fibronectin type III domain protein YP_005060027.1 KEGG: aca:ACP_0319 oxidoreductase, aldo/keto reductase family; PFAM: NADP-dependent oxidoreductase domain YP_005060028.1 KEGG: aca:ACP_1490 exopolysaccharide biosynthesis protein; PFAM: NAD-dependent epimerase/dehydratase YP_005060029.1 TIGRFAM: Nucleotide sugar dehydrogenase; KEGG: aba:Acid345_2833 UDP-glucose/GDP-mannose dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation YP_005060030.1 manually curated; TIGRFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like; KEGG: aba:Acid345_0413 HI0933-like protein; PFAM: Conserved hypothetical protein CHP00275, flavoprotein HI0933-like YP_005060031.1 KEGG: aca:ACP_2736 malate dehydrogenase; PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; SMART: Malic enzyme, NAD-binding YP_005060032.1 PFAM: Protein of unknown function DUF2252; KEGG: scb:SCAB_81611 hypothetical protein YP_005060033.1 PFAM: Domain of unknown function DUF336; KEGG: spe:Spro_1996 hypothetical protein YP_005060034.1 PFAM: S-adenosylmethionine-dependent methyltransferase; KEGG: aca:ACP_2325 hypothetical protein YP_005060035.1 PFAM: Protein of unknown function DUF2147; KEGG: rce:RC1_2402 hypothetical protein YP_005060036.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_0872 TonB-dependent receptor, plug YP_005060037.1 KEGG: aba:Acid345_0800 putative lipoprotein signal peptide YP_005060038.1 PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; KEGG: aca:ACP_1875 deoxyribodipyrimidine photolyase YP_005060039.1 PFAM: GCN5-related N-acetyltransferase (GNAT) domain; KEGG: pzu:PHZ_c2589 acetyltransferase, GNAT family protein YP_005060040.1 PFAM: Acyltransferase 3; KEGG: cpi:Cpin_4185 acyltransferase 3 YP_005060041.1 KEGG: smm:Smp_124600 hypothetical protein YP_005060042.1 TIGRFAM: 6-phosphogluconate dehydratase; KEGG: bid:Bind_2868 phosphogluconate dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase YP_005060043.1 KEGG: aca:ACP_2445 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 4 YP_005060044.1 KEGG: vcn:VOLCADRAFT_98328 hypothetical protein YP_005060045.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aba:Acid345_0663 TonB-dependent receptor YP_005060046.1 KEGG: hau:Haur_3780 hypothetical protein YP_005060047.1 manually curated; KEGG: bid:Bind_0292 hypothetical protein YP_005060048.1 PFAM: Filamentation induced by cAMP/death on curing-related; KEGG: aca:ACP_1374 Fic family protein YP_005060049.1 KEGG: xal:XALc_1954 hypothetical protein YP_005060050.1 PFAM: Protein of unknown function DUF885; KEGG: dfe:Dfer_1442 protein of unknown function DUF885 YP_005060051.1 PFAM: Glycoside hydrolase, family 31; KEGG: sus:Acid_7605 glycoside hydrolase family protein YP_005060052.1 PFAM: Protein of unknown function DUF885; KEGG: nth:Nther_2188 protein of unknown function DUF885 YP_005060053.1 PFAM: Peptidase S9B, dipeptidylpeptidase IV N-terminal; Peptidase S9, prolyl oligopeptidase, catalytic domain; KEGG: sus:Acid_4917 peptidase S9 prolyl oligopeptidase YP_005060054.1 KEGG: dac:Daci_4515 APHP domain-containing protein YP_005060055.1 KEGG: cli:Clim_2021 arsenical-resistance protein; TIGRFAM: Arsenical-resistance protein ACR3; PFAM: Bile acid:sodium symporter YP_005060056.1 KEGG: aca:ACP_3441 arsenical resistance operon repressor; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR YP_005060057.1 KEGG: scl:sce5614 arsenate reductase (glutaredoxin); PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_005060058.1 KEGG: sli:Slin_3131 hypothetical protein YP_005060059.1 KEGG: aba:Acid345_3979 hypothetical protein YP_005060060.1 PFAM: Peptidase S54, rhomboid domain; KEGG: bth:BT_1807 hypothetical protein YP_005060061.1 TIGRFAM: Formaldehyde dehydrogenase, glutathione-independent; KEGG: pde:Pden_1186 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase GroES-like YP_005060063.1 KEGG: gvi:gll2841 oxidoreductase; PFAM: NADP-dependent oxidoreductase domain YP_005060064.1 PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal; KEGG: svo:SVI_4322 aminopeptidase family YP_005060065.1 KEGG: aca:ACP_2734 transcription regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; GntR, C-terminal YP_005060066.1 KEGG: bpy:Bphyt_4560 proline racemase; PFAM: Proline racemase YP_005060067.1 PFAM: FAD dependent oxidoreductase; KEGG: aca:ACP_3274 oxidoreductase, FAD-dependent YP_005060068.1 KEGG: bpy:Bphyt_4562 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_005060069.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: aca:ACP_3273 pyridine nucleotide-disulfide oxidoreductase YP_005060070.1 KEGG: aca:ACP_3272 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase YP_005060071.1 KEGG: aca:ACP_1267 hypothetical protein YP_005060072.1 KEGG: aca:ACP_1267 hypothetical protein YP_005060073.1 KEGG: sus:Acid_2820 alpha-galactosidase; PFAM: Glycoside hydrolase, clan GH-D YP_005060074.1 KEGG: aca:ACP_1268 hypothetical protein YP_005060075.1 KEGG: bja:bll2087 hypothetical protein YP_005060076.1 PFAM: Glycoside hydrolase, family 43; KEGG: xal:XALc_1951 putative xylosidase precursor protein YP_005060077.1 KEGG: afe:Lferr_0128 resolvase domain YP_005060078.1 PFAM: Amino acid permease domain; KEGG: sus:Acid_1245 amino acid permease-associated region YP_005060079.1 KEGG: aca:ACP_2787 ribulokinase; PFAM: Carbohydrate kinase, FGGY, C-terminal; Carbohydrate kinase, FGGY, N-terminal YP_005060080.1 KEGG: aba:Acid345_0326 L-arabinose isomerase; PFAM: L-arabinose isomerase YP_005060081.1 KEGG: bph:Bphy_4441 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain YP_005060082.1 PFAM: Protein of unknown function DUF1680; Coagulation factor 5/8 type, C-terminal; KEGG: sus:Acid_7231 hypothetical protein YP_005060083.1 KEGG: rso:RS01740 putative cytochrome P-450-like monooxygenase oxidoreductase protein; PFAM: Cytochrome P450 YP_005060084.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; KEGG: nfa:nfa14390 hypothetical protein YP_005060085.1 KEGG: sus:Acid_4536 ketosteroid isomerase-like protein YP_005060086.1 KEGG: cvi:CV_1939 hypothetical protein YP_005060087.1 KEGG: cja:CJA_0228 hypothetical protein YP_005060088.1 KEGG: ter:Tery_2111 glycosyl transferase family protein; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyl transferase, family 28 YP_005060089.1 KEGG: tva:TVAG_023990 hypothetical protein YP_005060090.1 KEGG: sjp:SJA_C1-09550 AraC-family transcriptional regulator; PFAM: HTH transcriptional regulator, AraC; SMART: Helix-turn-helix, AraC type, DNA binding domain YP_005060091.1 KEGG: mar:MAE_05250 glycosyl transferase; TIGRFAM: UDP-glycosyltransferase, MGT; PFAM: UDP-glucuronosyl/UDP-glucosyltransferase; Glycosyl transferase, family 28 YP_005060092.1 PFAM: Protein of unknown function DUF422; KEGG: aca:ACP_2245 hypothetical protein YP_005060093.1 KEGG: srm:SRM_02094 conserved hypothetical protein containing TonB-dependent receptor YP_005060094.1 TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; KEGG: aca:ACP_1497 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: Sugar isomerase (SIS); Glutamine amidotransferase, class-II YP_005060095.1 KEGG: sus:Acid_5246 hypothetical protein YP_005060096.1 KEGG: aca:ACP_2665 hypothetical protein YP_005060097.1 KEGG: aca:ACP_2062 methanesulfonate sulfonatase MsuD; PFAM: Luciferase-like, subgroup YP_005060098.1 PFAM: ATP-grasp fold, RimK-type; KEGG: aca:ACP_2063 hypothetical protein YP_005060099.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit A; KEGG: aca:ACP_0927 3-oxoacid CoA-transferase, A subunit; PFAM: Coenzyme A transferase YP_005060100.1 SMART: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; KEGG: aca:ACP_0929 3-oxoadipate CoA-succinyl transferase, beta subunit; PFAM: Coenzyme A transferase YP_005060101.1 KEGG: gvi:glr2725 hypothetical protein; PFAM: RES; SMART: RES YP_005060102.1 KEGG: nph:NP5158A phosphohexomutase 4 (phosphoglucomutase, phosphomannomutase) YP_005060103.1 KEGG: rlt:Rleg2_6567 putative addiction module antidote protein, CopG/Arc/MetJ family; TIGRFAM: Putative addiction module antidote protein, CC2985; PFAM: Uncharacterised protein family UPF0156/MetJ /Arc repressor YP_005060104.1 KEGG: aca:ACP_2350 ATP-dependent RNA helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; Helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; Helicase, C-terminal YP_005060105.1 PFAM: Glycosyl transferase, family 2; KEGG: gca:Galf_2841 glycosyl transferase family 2 YP_005060106.1 PFAM: Polysaccharide biosynthesis protein; KEGG: bte:BTH_II1980 hypothetical protein YP_005060107.1 KEGG: aca:ACP_1127 ROK family protein; PFAM: ROK YP_005060108.1 KEGG: rru:Rru_A0250 xylulokinase; TIGRFAM: Xylulokinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal YP_005060109.1 PFAM: L-fucose isomerase-like, C-terminal; KEGG: aca:ACP_2788 putative L-fucose isomerase YP_005060110.1 KEGG: rmr:Rmar_0474 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_005060111.1 PFAM: Ankyrin repeat; KEGG: gau:GAU_2812 hypothetical protein YP_005060112.1 KEGG: sus:Acid_3443 glycyl aminopeptidase; PFAM: Peptidase M61; SMART: PDZ/DHR/GLGF YP_005060113.1 KEGG: aca:ACP_2284 peptidase, family M1; PFAM: Peptidase M1, membrane alanine aminopeptidase, N-terminal YP_005060114.1 PFAM: Sodium/solute symporter; KEGG: aca:ACP_2304 transporter, SSS family YP_005060115.1 KEGG: vcn:VOLCADRAFT_105000 hypothetical protein YP_005060116.1 PFAM: Radical SAM; KEGG: aca:ACP_2696 radical SAM domain protein YP_005060117.1 KEGG: aca:ACP_2697 putative 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; PFAM: 6-pyruvoyl tetrahydropterin synthase-related YP_005060118.1 KEGG: rme:Rmet_1117 pyridoxal-5'-phosphate-dependent enzyme, subunit beta YP_005060119.1 KEGG: aca:ACP_1651 putative DnaQ family exonuclease/DinG family helicase; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal YP_005060120.1 KEGG: sus:Acid_3638 Cna B domain-containing protein YP_005060121.1 TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; KEGG: aca:ACP_1648 GTP-binding protein EngA; SMART: ATPase, AAA+ type, core YP_005060122.1 PFAM: Oxidoreductase, N-terminal; KEGG: sus:Acid_2175 oxidoreductase domain-containing protein YP_005060123.1 PFAM: Protein of unknown function DUF497; KEGG: rrs:RoseRS_0832 hypothetical protein YP_005060124.1 KEGG: pph:Ppha_1714 hypothetical protein YP_005060125.1 KEGG: aca:ACP_0808 hypothetical protein YP_005060126.1 KEGG: aca:ACP_2049 response regulators of cell autolysis; PFAM: LytTr, DNA-binding domain; Signal transduction response regulator, receiver domain; SMART: Signal transduction response regulator, receiver domain; LytTr, DNA-binding domain YP_005060127.1 KEGG: aca:ACP_2048 hypothetical protein YP_005060128.1 KEGG: bfo:BRAFLDRAFT_90204 hypothetical protein YP_005060129.1 KEGG: aca:ACP_2046 RNA polymerase sigma-70 factor; TIGRFAM: RNA polymerase sigma-70; PFAM: RNA polymerase sigma-70 region 2; RNA polymerase sigma factor 70, region 4 type 2 YP_005060130.1 KEGG: hch:HCH_01563 esterase/lipase YP_005060131.1 KEGG: mlo:mlr7407 hypothetical protein YP_005060132.1 PFAM: Transcription regulator PadR N-terminal-like; KEGG: sus:Acid_5187 PadR family transcriptional regulator YP_005060133.1 KEGG: cpi:Cpin_7119 hypothetical protein YP_005060134.1 PFAM: Serine/threonine-protein kinase-like domain; KEGG: sus:Acid_4099 sporulation domain-containing protein YP_005060135.1 KEGG: rlg:Rleg_4223 pyridoxal-5'-phosphate-dependent protein beta subunit YP_005060136.1 KEGG: geo:Geob_1207 alpha/beta hydrolase fold protein YP_005060137.1 PFAM: Alpha/beta hydrolase fold-1; KEGG: aba:Acid345_0627 alpha/beta hydrolase YP_005060138.1 TIGRFAM: RNA methyltransferase TrmH, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; RNA 2-O ribose methyltransferase, substrate binding; KEGG: aca:ACP_2042 RNA methyltransferase, TrmH family, group 3; SMART: RNA 2-O ribose methyltransferase, substrate binding YP_005060139.1 KEGG: aca:ACP_2041 hypothetical protein YP_005060140.1 SMART: PA14; manually curated; KEGG: aca:ACP_2415 beta-xylosidase B; PFAM: Glycoside hydrolase, family 3, C-terminal; Glycoside hydrolase, family 3, N-terminal YP_005060141.1 KEGG: pif:PITG_11743 nuclear pore complex protein, putative YP_005060142.1 KEGG: rme:Rmet_4845 hypothetical protein YP_005060143.1 PFAM: Radical SAM; KEGG: aca:ACP_2855 radical SAM domain protein YP_005060144.1 KEGG: aba:Acid345_3008 von Willebrand factor, type A; TIGRFAM: VWFA-related, acidobacterial-type; SMART: von Willebrand factor, type A YP_005060145.1 KEGG: spe:Spro_1967 hypothetical protein YP_005060146.1 KEGG: aca:ACP_2271 MutS2 family protein; PFAM: DNA mismatch repair protein MutS, C-terminal; Smr protein/MutS2 C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor domain YP_005060147.1 KEGG: aca:ACP_2189 hypothetical protein YP_005060148.1 KEGG: aca:ACP_2188 delta-aminolevulinic acid dehydratase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase YP_005060149.1 PFAM: Excinuclease ABC, C subunit, N-terminal; KEGG: azo:azo0008 hypothetical protein YP_005060150.1 TIGRFAM: Dihydrolipoamide dehydrogenase; KEGG: aca:ACP_2857 dihydrolipoyl dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation YP_005060151.1 TIGRFAM: Octanoyltransferase; KEGG: aca:ACP_2861 lipoate-protein ligase B; PFAM: Biotin/lipoate A/B protein ligase YP_005060152.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component; KEGG: aca:ACP_2354 putative dihydrolipoamide acetyltransferase; PFAM: 2-oxoacid dehydrogenase acyltransferase, catalytic domain; Biotin/lipoyl attachment; E3 binding YP_005060153.1 PFAM: Protein of unknown function DUF3037; KEGG: aca:ACP_2367 hypothetical protein YP_005060154.1 KEGG: aca:ACP_2369 hypothetical protein YP_005060155.1 KEGG: aca:ACP_2377 hypothetical protein YP_005060156.1 PFAM: Oxidoreductase, N-terminal; Oxidoreductase, C-terminal; KEGG: aca:ACP_2378 oxidoreductase, NAD-binding YP_005060157.1 KEGG: aca:ACP_2192 putative lipoprotein YP_005060158.1 KEGG: aca:ACP_2191 conserved hypothetical protein TIGR00247; TIGRFAM: Uncharacterised protein family UPF0755; PFAM: Uncharacterised protein family UPF0755 YP_005060159.1 KEGG: sgr:SGR_2096 hypothetical protein YP_005060160.1 SMART: Resolvase, RNase H-like fold; TIGRFAM: Resolvase, holliday junction-type, YqgF-like; KEGG: aca:ACP_2190 conserved hypothetical protein TIGR00250; HAMAP: Resolvase, holliday junction-type, YqgF-like; PFAM: Resolvase, holliday junction-type, YqgF-like YP_005060161.1 PFAM: Transcription elongation factor, GreA/GreB, C-terminal; Transcription elongation factor, GreA/GreB, N-terminal; KEGG: aca:ACP_2223 transcription elongation factor GreA YP_005060162.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: aca:ACP_2224 CDP-alcohol phosphatidyltransferase family protein YP_005060163.1 KEGG: aca:ACP_3445 hypothetical protein; PFAM: CHAD; SMART: CHAD YP_005060164.1 TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; KEGG: aca:ACP_1380 nicotinate-nucleotide adenylyltransferase; PFAM: Cytidylyltransferase YP_005060165.1 KEGG: aca:ACP_1382 iojap family protein; TIGRFAM: Ribosome-associated, Iojap-like; PFAM: Ribosome-associated, Iojap-like YP_005060166.1 PFAM: Collagen-binding surface protein Cna-like, B-type domain; KEGG: aba:Acid345_0395 hypothetical protein YP_005060167.1 PFAM: SPOUT methyltransferase, predicted; KEGG: aba:Acid345_0024 hypothetical protein YP_005060168.1 PFAM: TonB-dependent receptor, plug; Collagen-binding surface protein Cna-like, B-type domain; KEGG: sus:Acid_3594 hypothetical protein YP_005060169.1 PFAM: Cupin 2, conserved barrel; KEGG: cpi:Cpin_4272 cupin 2 conserved barrel domain protein YP_005060170.1 KEGG: gau:GAU_3021 hypothetical membrane protein YP_005060171.1 KEGG: aca:ACP_2030 DNA-binding protein HU; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein YP_005060172.1 KEGG: aca:ACP_2029 conserved hypothetical protein TIGR02453; TIGRFAM: Conserved hypothetical protein CHP02453; PFAM: Conserved hypothetical protein CHP02453 YP_005060173.1 PFAM: Peptidase M28; KEGG: aba:Acid345_2040 peptidase M28 YP_005060174.1 KEGG: rca:Rcas_3157 peptidase M50 YP_005060175.1 KEGG: aca:ACP_2055 hypothetical protein YP_005060176.1 PFAM: Peptidase M48; KEGG: aba:Acid345_0608 peptidase M48, Ste24p YP_005060177.1 PFAM: Protein of unknown function DUF2339, transmembrane; KEGG: aba:Acid345_0607 hypothetical protein YP_005060178.1 KEGG: scl:sce5221 hypothetical protein YP_005060179.1 PFAM: Glycosyl transferase, family 2; KEGG: pcu:pc0188 hypothetical protein YP_005060180.1 PFAM: Glycosyl transferase, family 2; KEGG: tbd:Tbd_1875 glycosyl transferase, group 2 family protein YP_005060181.1 PFAM: Glycosyl transferase, family 2; KEGG: mba:Mbar_A0237 putative glycosyl transferase YP_005060182.1 PFAM: Polysaccharide biosynthesis protein; KEGG: sbm:Shew185_2896 polysaccharide biosynthesis protein YP_005060183.1 PFAM: Lipopolysaccharide biosynthesis; KEGG: aca:ACP_1871 chain length determinant protein domain protein YP_005060184.1 PFAM: O-antigen ligase-related; KEGG: wch:wcw_1806 hypothetical protein YP_005060185.1 KEGG: bcm:Bcenmc03_5354 outer membrane autotransporter YP_005060186.1 KEGG: maq:Maqu_1643 hypothetical protein YP_005060187.1 KEGG: aca:ACP_2183 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related YP_005060188.1 TIGRFAM: Membrane insertion protein, OxaA/YidC; Membrane insertion protein, OxaA/YidC, bacterial; HAMAP: Membrane insertion protein, OxaA/YidC, bacterial; KEGG: aca:ACP_2117 membrane protein; PFAM: Membrane insertion protein, OxaA/YidC YP_005060189.1 KEGG: aca:ACP_2184 R3H domain protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H YP_005060190.1 KEGG: mxa:MXAN_6728 zinc-binding dehydrogenase family oxidoreductase; PFAM: Alcohol dehydrogenase GroES-like; Alcohol dehydrogenase, C-terminal YP_005060191.1 PFAM: PilT protein, N-terminal; KEGG: amr:AM1_A0134 PilT domain-containing protein YP_005060192.1 KEGG: aba:Acid345_2637 prevent-host-death protein; TIGRFAM: Prevent-host-death protein; PFAM: Prevent-host-death protein YP_005060193.1 KEGG: sus:Acid_0961 hypothetical protein YP_005060194.1 TIGRFAM: Threonyl-tRNA synthetase, class IIa; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved domain; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; KEGG: aca:ACP_2162 threonyl-tRNA synthetase; SMART: Threonyl/alanyl tRNA synthetase, SAD YP_005060195.1 PFAM: TonB-dependent receptor, plug; KEGG: sus:Acid_4916 TonB-dependent receptor, plug YP_005060196.1 TIGRFAM: ParB-like partition protein; PFAM: ParB-like nuclease; KEGG: aca:ACP_2174 chromosome partitioning protein ParB; SMART: ParB-like nuclease YP_005060197.1 PFAM: Cobyrinic acid a,c-diamide synthase; KEGG: aca:ACP_2173 chromosome partitioning protein ParA YP_005060198.1 KEGG: aca:ACP_2172 methyltransferase GidB; TIGRFAM: rRNA small subunit methyltransferase G; PFAM: rRNA small subunit methyltransferase G YP_005060199.1 PFAM: Peptidase C26; KEGG: aca:ACP_2171 class-I glutamine amidotransferase family protein YP_005060200.1 KEGG: sbi:SORBI_09g004950 hypothetical protein YP_005060201.1 KEGG: aba:Acid345_0883 hypothetical protein YP_005060202.1 KEGG: aba:Acid345_0882 hypothetical protein YP_005060203.1 TIGRFAM: Bacterial DNA recombination protein RuvA; HAMAP: Bacterial DNA recombination protein RuvA; KEGG: aca:ACP_2054 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; Helix-hairpin-helix motif; DNA helicase, Holliday junction RuvA type, domain III, C-terminal YP_005060204.1 TIGRFAM: Protein of unknown function DUF37; HAMAP: Protein of unknown function DUF37; KEGG: syr:SynRCC307_0622 hypothetical protein; PFAM: Protein of unknown function DUF37 YP_005060205.1 TIGRFAM: Ribonuclease P; HAMAP: Ribonuclease P; KEGG: aca:ACP_2120 ribonuclease P protein component; PFAM: Ribonuclease P YP_005060206.1 KEGG: aca:ACP_2121 ribosomal protein L34; TIGRFAM: Ribosomal protein L34; PFAM: Ribosomal protein L34