-- dump date 20140619_102646 -- class Genbank::CDS -- table cds_note -- id note YP_003407184.1 KEGG: tfu:Tfu_0001 chromosomal replication initiation protein; TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_003407185.1 KEGG: sco:SCO3878 DNA polymerase III subunit beta; TIGRFAM: DNA polymerase III, beta subunit; PFAM: DNA polymerase III beta chain; SMART: DNA polymerase III beta chain YP_003407186.1 TIGRFAM: 6-phosphogluconate dehydrogenase, decarboxylating; PFAM: 6-phosphogluconate dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase domain protein; KEGG: sma:SAV_1771 6-phosphogluconate dehydrogenase- like protein YP_003407187.1 TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein; KEGG: sen:SACE_0005 recombination protein F YP_003407188.1 PFAM: protein of unknown function DUF721; KEGG: nfa:nfa40 hypothetical protein YP_003407189.1 KEGG: sma:SAV_5061 integral membrane protein YP_003407190.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: sco:SCO3235 ABC transporter YP_003407191.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; short-chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sco:SCO0841 oxidoreductase YP_003407192.1 PFAM: amino acid permease-associated region; KEGG: rop:ROP_66300 putative amino acid transporter YP_003407193.1 KEGG: rha:RHA1_ro03674 DNA gyrase subunit B; TIGRFAM: DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; DNA gyrase subunit B domain protein; TOPRIM domain protein; ATP-binding region ATPase domain protein; SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein YP_003407194.1 KEGG: stp:Strop_0009 DNA gyrase subunit A; TIGRFAM: DNA gyrase, A subunit; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; SMART: DNA gyrase/topoisomerase IV subunit A YP_003407195.1 KEGG: mul:MUL_0007 hypothetical protein YP_003407197.1 PFAM: integrase family protein; KEGG: nfa:nfa7110 putative phage integrase YP_003407198.1 PFAM: regulatory protein MerR; KEGG: nca:Noca_1723 hypothetical protein YP_003407199.1 PFAM: TrwC relaxase; KEGG: nca:Noca_1102 exonuclease V subunit alpha YP_003407200.1 PFAM: Tetracyclin repressor domain protein; regulatory protein TetR; KEGG: rha:RHA1_ro02950 TetR family transcriptional regulator YP_003407201.1 KEGG: nca:Noca_4894 hypothetical protein YP_003407202.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02951 oxidoreductase, Zn-binding YP_003407203.1 KEGG: hau:Haur_5238 hypothetical protein YP_003407204.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcv:Bcav_1052 ABC transporter related YP_003407205.1 KEGG: bcv:Bcav_1051 putative integral membrane transport protein YP_003407206.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ana:alr7095 hypothetical protein YP_003407208.1 KEGG: bpr:GBP346_A1212 cell divisionftsk/spoiiie YP_003407209.1 PFAM: peptidase S49; KEGG: tel:tlr1610 protease IV-like protein YP_003407210.1 KEGG: sen:SACE_0308 hypothetical protein YP_003407211.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: sgr:SGR_3716 putative peptidyl-prolyl cis- trans isomerase YP_003407212.1 KEGG: mpa:MAP0012c hypothetical protein YP_003407213.1 KEGG: fre:Franean1_3657 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003407214.1 PFAM: protein of unknown function UPF0233; KEGG: nfa:nfa760 putative septation inhibitor protein YP_003407215.1 PFAM: protein of unknown function DUF881; KEGG: saq:Sare_0057 hypothetical protein YP_003407216.1 TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I; KEGG: fal:FRAAL6756 para-aminobenzoate synthase component II YP_003407217.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; aminoglycoside phosphotransferase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: rha:RHA1_ro03696 serine/threonine protein kinase YP_003407218.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: art:Arth_0021 serine/threonine protein kinase YP_003407219.1 PFAM: penicillin-binding protein transpeptidase; KEGG: ace:Acel_0020 peptidoglycan glycosyltransferase YP_003407220.1 PFAM: cell cycle protein; KEGG: nfa:nfa830 putative cell division protein YP_003407221.1 KEGG: sen:SACE_0048 protein serine/threonine phosphatases; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein YP_003407222.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: sen:SACE_0049 FHA domain-containing protein YP_003407223.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: stp:Strop_0042 FHA domain-containing protein YP_003407224.1 PFAM: protein of unknown function DUF1486; KEGG: gvi:glr2060 hypothetical protein YP_003407225.1 PFAM: protein of unknown function DUF1707; KEGG: nfa:nfa41690 hypothetical protein YP_003407226.1 PFAM: Aldose 1-epimerase; KEGG: saq:Sare_0514 aldose 1-epimerase YP_003407227.1 PFAM: MOSC domain protein beta barrel domain protein; MOSC domain containing protein; KEGG: tgr:Tgr7_2591 hypothetical protein YP_003407228.1 KEGG: rop:ROP_35520 hypothetical protein YP_003407229.1 PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: saq:Sare_4251 aminotransferase YP_003407230.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: pfs:PFLU5051 putative hydrolase YP_003407231.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rop:ROP_19820 hypothetical protein YP_003407232.1 PFAM: Domain of unknown function DUF2382-like; KEGG: aau:AAur_3970 hypothetical protein YP_003407233.1 PFAM: CHAD domain containing protein; adenylate cyclase; KEGG: nca:Noca_2705 CHAD domain-containing protein YP_003407234.1 PFAM: metallophosphoesterase; KEGG: mgi:Mflv_4868 metallophosphoesterase YP_003407235.1 PFAM: regulatory protein TetR; KEGG: sco:SCO7809 TetR family transcriptional regulator YP_003407236.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: aau:AAur_2055 GntR family transcriptional regulator YP_003407238.1 KEGG: nca:Noca_1471 integral membrane protein YP_003407239.1 KEGG: nca:Noca_1872 hypothetical protein YP_003407240.1 KEGG: sco:SCO7708 hypothetical protein YP_003407242.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa21600 putative enoyl-CoA hydratase/isomerase family protein YP_003407243.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: nfa:nfa810 putative serine/threonine protein kinase YP_003407244.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: nfa:nfa810 putative serine/threonine protein kinase YP_003407245.1 KEGG: hypothetical protein YP_003407246.1 PFAM: CinA domain protein; molybdopterin binding domain; KEGG: mjl:Mjls_2737 competence damage-inducible protein A YP_003407247.1 KEGG: bbe:BBR47_04260 hypothetical protein YP_003407248.1 KEGG: mlu:Mlut_22710 hypothetical protein YP_003407250.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spe:Spro_1487 GCN5-related N- acetyltransferase YP_003407251.1 SMART: HNH nuclease; KEGG: fal:FRAAL3457 hypothetical protein YP_003407252.1 KEGG: ddr:Deide_1p00099 putative diguanylate- cyclase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003407253.1 KEGG: kra:Krad_1483 hypothetical protein YP_003407254.1 PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: rsk:RSKD131_1430 phospholipase D/transphosphatidylase YP_003407255.1 PFAM: formate/nitrite transporter; KEGG: cby:CLM_1107 formate/nitrite transporter family protein YP_003407256.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sen:SACE_7205 hypothetical protein YP_003407257.1 KEGG: rxy:Rxyl_2783 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein; PAS domain containing protein YP_003407258.1 PFAM: type IV pilus assembly PilZ; KEGG: nca:Noca_1824 type IV pilus assembly PilZ YP_003407259.1 PFAM: type IV pilus assembly PilZ; KEGG: ace:Acel_0863 type IV pilus assembly PilZ YP_003407260.1 KEGG: mkm:Mkms_1572 putative ABC transporter YP_003407261.1 KEGG: bcv:Bcav_2640 GTP-binding protein HSR1- related protein YP_003407262.1 PFAM: ATP-binding region ATPase domain protein; KEGG: nca:Noca_1263 response regulator receiver YP_003407263.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: kra:Krad_4213 putative GAF sensor protein YP_003407264.1 PFAM: Inosine/uridine-preferring nucleoside hydrolase; KEGG: sbo:SBO_0514 ribonucleoside hydrolase 1 YP_003407265.1 PFAM: amino acid permease-associated region; KEGG: mkm:Mkms_5270 amino acid permease-associated region YP_003407266.1 KEGG: Gm3773; predicted gene 3773 YP_003407267.1 KEGG: kra:Krad_0098 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein YP_003407268.1 KEGG: bcv:Bcav_0090 pyrrolo-quinoline quinone YP_003407269.1 PFAM: periplasmic solute binding protein; KEGG: bcv:Bcav_1775 periplasmic solute binding protein YP_003407270.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: mva:Mvan_5750 kojibiose phosphorylase YP_003407271.1 PFAM: thiamine monophosphate synthase; KEGG: stp:Strop_3885 thiamine monophosphate synthase YP_003407272.1 PFAM: thiazole biosynthesis family protein; KEGG: stp:Strop_3886 thiazole biosynthesis family protein YP_003407273.1 TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein; KEGG: sde:Sde_1455 hypothetical protein YP_003407274.1 TIGRFAM: glycine oxidase ThiO; PFAM: FAD dependent oxidoreductase; KEGG: sgr:SGR_5394 putative glycine oxidase YP_003407275.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rrs:RoseRS_2771 putative hydroxymethylpyrimidine transporter CytX YP_003407276.1 PFAM: TENA/THI-4 domain protein; KEGG: rxy:Rxyl_2792 TenA family transcription regulator YP_003407277.1 PFAM: TENA/THI-4 domain protein; KEGG: npu:Npun_R3311 TenA family transcription regulator YP_003407278.1 KEGG: fra:Francci3_4323 hypothetical protein YP_003407279.1 TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein; KEGG: rxy:Rxyl_0654 manganese transport protein MntH YP_003407280.1 PFAM: protein of unknown function DUF82; KEGG: sen:SACE_5199 putative zinc finger protein YP_003407281.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ace:Acel_1455 glyoxalase/bleomycin resistance protein/dioxygenase YP_003407282.1 PFAM: GCN5-related N-acetyltransferase; KEGG: saq:Sare_1733 GCN5-related N- acetyltransferase YP_003407283.1 KEGG: rsa:RSal33209_2919 hypothetical protein YP_003407285.1 KEGG: rha:RHA1_ro04011 protein-methionine-S-oxide reductase; TIGRFAM: peptide methionine sulfoxide reductase; PFAM: Methionine sulfoxide reductase A YP_003407286.1 PFAM: methyltransferase small; Methyltransferase type 11; Methyltransferase type 12; putative RNA methylase; KEGG: nfa:nfa48380 hypothetical protein YP_003407287.1 PFAM: Methyltransferase type 11; methyltransferase small; O-methyltransferase family 2; Methyltransferase type 12; KEGG: rop:ROP_19900 hypothetical protein YP_003407288.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: nca:Noca_1974 chemotaxis sensory transducer YP_003407290.1 TIGRFAM: hydroxyisourate hydrolase; PFAM: Transthyretin; KEGG: nfa:nfa52430 hypothetical protein YP_003407291.1 TIGRFAM: OHCU decarboxylase; PFAM: Oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase; KEGG: aau:AAur_3522 putative OHCU decarboxylase YP_003407292.1 KEGG: fal:FRAAL1466 hypothetical protein YP_003407293.1 KEGG: mva:Mvan_1931 multi-sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; GAF domain protein; Sulfate transporter/antisigma-factor antagonist STAS; PAS fold domain protein; PAS fold-4 domain protein; histidine kinase A domain protein; PAS fold-3 domain protein; response regulator receiver; SMART: response regulator receiver; protein phosphatase 2C domain protein; PAC repeat-containing protein; histidine kinase A domain protein; GAF domain protein; PAS domain containing protein; ATP-binding region ATPase domain protein YP_003407294.1 KEGG: nfa:nfa18850 hypothetical protein YP_003407295.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; SMART: regulatory protein MarR; KEGG: ara:Arad_4437 transcriptional regulator protein YP_003407296.1 PFAM: ATP dependent DNA ligase; KEGG: ach:Achl_4500 ATP dependent DNA ligase YP_003407297.1 PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; KEGG: kra:Krad_0960 hypothetical protein YP_003407300.1 PFAM: Hydantoinase B/oxoprolinase; KEGG: rer:RER_58720 hydantoinase B YP_003407301.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase domain protein; KEGG: rha:RHA1_ro03487 hydantoin utilization protein A YP_003407304.1 PFAM: FAD linked oxidase domain protein; KEGG: sen:SACE_3870 putative glycolate oxidase YP_003407305.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: bcv:Bcav_0314 fumarylacetoacetate (FAA) hydrolase YP_003407306.1 KEGG: fal:FRAAL4146 hypothetical protein YP_003407307.1 PFAM: protein of unknown function DUF1707; KEGG: nfa:nfa41690 hypothetical protein YP_003407308.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: bcv:Bcav_0776 transcriptional regulator, MarR family YP_003407309.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: bcv:Bcav_0777 ABC transporter related YP_003407310.1 KEGG: sen:SACE_0039 hypothetical protein YP_003407311.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sen:SACE_0038 putative sortase-like protein YP_003407312.1 KEGG: cmi:CMM_0825 putative cell surface protein; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: PKD domain containing protein; Gram-positive anchor; SMART: PKD domain containing protein YP_003407313.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: ank:AnaeK_1068 bifunctional deaminase- reductase domain protein YP_003407314.1 PFAM: EAL domain protein; GAF domain protein; SMART: EAL domain protein; GAF domain protein; KEGG: kra:Krad_0179 diguanylate cyclase/phosphodiesterase with GAF sensor YP_003407315.1 TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: ach:Achl_3681 luciferase-like monooxygenase YP_003407316.1 KEGG: ach:Achl_0802 hypothetical protein YP_003407317.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bwe:BcerKBAB4_2400 glyoxalase/bleomycin resistance protein/dioxygenase YP_003407318.1 PFAM: Polyketide synthesis cyclase; KEGG: sma:SAV_2842 cyclase II YP_003407319.1 PFAM: cytochrome P450; KEGG: sco:SCO3099 cytochrome P450 hydroxylase YP_003407320.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; Antibiotic biosynthesis monooxygenase; KEGG: rha:RHA1_ro04915 monooxygenase YP_003407321.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: fra:Francci3_2848 antibiotic biosynthesis monooxygenase YP_003407322.1 PFAM: Beta-ketoacyl synthase; KEGG: fre:Franean1_2394 beta-ketoacyl synthase YP_003407323.1 PFAM: Beta-ketoacyl synthase; KEGG: fre:Franean1_2393 beta-ketoacyl synthase YP_003407324.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: fre:Franean1_2392 cupin 2 domain-containing protein YP_003407325.1 KEGG: bpa:BPP3306 acyl-carrier-protein S- malonyltransferase YP_003407326.1 PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; KEGG: fre:Franean1_2391 cyclase/dehydrase YP_003407327.1 KEGG: fre:Franean1_2390 putative actinorhodin polyketide synthase acyl carrier protein (ACP) (ActI ORF3) YP_003407328.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: fra:Francci3_2926 carbamoyl-phosphate synthase L chain, ATP-binding YP_003407329.1 TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: stp:Strop_2504 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_003407330.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; carboxyl transferase; KEGG: sen:SACE_0026 acetyl carboxylase YP_003407331.1 PFAM: Polyketide synthesis cyclase; KEGG: sma:SAV_2842 cyclase II YP_003407332.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: tfu:Tfu_0767 LuxR response regulator receiver YP_003407333.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; SMART: regulatory protein LuxR; KEGG: sen:SACE_0148 two-component system response regulator YP_003407334.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: kra:Krad_0152 NADH:flavin oxidoreductase/NADH oxidase YP_003407335.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sgr:SGR_5629 MarR family transcriptional regulator YP_003407336.1 KEGG: bcv:Bcav_0294 hypothetical protein YP_003407337.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: rop:ROP_60110 hypothetical protein YP_003407338.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO5870 ABC transporter ATP-binding protein YP_003407339.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rca:Rcas_4355 AbrB family transcriptional regulator YP_003407340.1 PFAM: protein of unknown function DUF214; KEGG: sgr:SGR_1440 putative ABC transporter permease protein YP_003407341.1 PFAM: beta-lactamase; KEGG: rha:RHA1_ro02594 lactone hydrolase YP_003407342.1 KEGG: bcv:Bcav_1465 hypothetical protein YP_003407344.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: stp:Strop_2970 short-chain dehydrogenase/reductase SDR YP_003407345.1 PFAM: carbon monoxide dehydrogenase subunit G; Polyketide cyclase/dehydrase; KEGG: rop:ROP_32810 hypothetical protein YP_003407346.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: nca:Noca_1491 xanthine dehydrogenase, molybdenum binding subunit apoprotein YP_003407347.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: nca:Noca_1490 2Fe-2S iron-sulfur cluster binding domain-containing protein YP_003407348.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: nca:Noca_1489 carbon-monoxide dehydrogenase (acceptor) YP_003407349.1 TIGRFAM: uracil-xanthine permease; PFAM: Xanthine/uracil/vitamin C permease; KEGG: rop:ROP_32850 putative uracil permease YP_003407350.1 PFAM: FdrA family protein; KEGG: nca:Noca_1485 FdrA family protein YP_003407351.1 PFAM: protein of unknown function DUF1116; KEGG: nca:Noca_1484 hypothetical protein YP_003407352.1 KEGG: mgi:Mflv_1144 hypothetical protein YP_003407353.1 KEGG: saq:Sare_4818 30S ribosomal protein S4; TIGRFAM: ribosomal protein S4; PFAM: RNA-binding S4 domain protein; ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_003407354.1 PFAM: phosphotransferase KptA/Tpt1; KEGG: sco:SCO3953 RNA 2'-phosphotransferase-like protein YP_003407356.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: mva:Mvan_2982 stress responsive alpha-beta barrel domain-containing protein YP_003407357.1 PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: bbt:BBta_6635 methyl-accepting chemotaxis protein YP_003407358.1 KEGG: rer:RER_58820 barbiturase; TIGRFAM: ring-opening amidohydrolase; PFAM: Amidohydrolase ring-opening AtzD/TrzD YP_003407359.1 PFAM: aspartate/glutamate/uridylate kinase; KEGG: nca:Noca_1504 carbamate kinase YP_003407360.1 TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein; KEGG: dhd:Dhaf_2109 histidinol phosphate phosphatase HisJ family YP_003407361.1 KEGG: mlu:Mlut_03530 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicase YP_003407362.1 KEGG: sco:SCO7302 hypothetical protein YP_003407363.1 KEGG: rop:ROP_66400 hypothetical membrane protein YP_003407364.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rop:ROP_66410 putative ABC transporter ATP- binding protein YP_003407365.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: nfa:nfa3720 putative transcriptional regulator YP_003407366.1 KEGG: msm:MSMEG_3627 urease subunit gamma; TIGRFAM: urease, gamma subunit; PFAM: Urease gamma subunit region YP_003407367.1 KEGG: rop:ROP_57390 urease beta subunit; TIGRFAM: urease, beta subunit; PFAM: Urease beta subunit YP_003407368.1 KEGG: rha:RHA1_ro05680 urease subunit alpha; TIGRFAM: urease, alpha subunit; PFAM: amidohydrolase; Urease alpha-subunit domain protein YP_003407369.1 KEGG: mva:Mvan_3081 urease accessory protein UreF YP_003407370.1 TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K; KEGG: msm:MSMEG_3623 urease accessory protein UreG YP_003407371.1 KEGG: mva:Mvan_3079 putative urease accessory protein YP_003407372.1 KEGG: rop:ROP_44360 allantoicase; TIGRFAM: allantoicase; PFAM: Allantoicase region YP_003407373.1 KEGG: rer:RER_08950 hypothetical protein YP_003407374.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: fra:Francci3_0845 amidohydrolase YP_003407375.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: msm:MSMEG_6246 pyridoxal-phosphate-dependent transferase YP_003407376.1 KEGG: ach:Achl_0375 putative transmembrane anti- sigma factor YP_003407377.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: kra:Krad_3107 ECF subfamily RNA polymerase sigma-24 factor YP_003407379.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function DUF2260; KEGG: msm:MSMEG_6247 hypothetical protein YP_003407380.1 KEGG: mjl:Mjls_5248 hypothetical protein YP_003407381.1 PFAM: protein of unknown function DUF323; KEGG: msm:MSMEG_6249 hypothetical protein YP_003407382.1 TIGRFAM: glutamate/cysteine ligase family protein; PFAM: glutamate--cysteine ligase GCS2; KEGG: msm:MSMEG_6250 glutamate--cysteine ligase YP_003407383.1 PFAM: protein of unknown function DUF309; KEGG: sgr:SGR_879 hypothetical protein YP_003407384.1 KEGG: rxy:Rxyl_1741 hypothetical protein YP_003407386.1 PFAM: Polyketide cyclase/dehydrase; KEGG: jan:Jann_2303 hypothetical protein YP_003407387.1 KEGG: sen:SACE_6567 hypothetical protein YP_003407388.1 PFAM: transcriptional regulator PadR family protein; KEGG: kra:Krad_2816 PadR-like family transcriptional regulator YP_003407389.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: nca:Noca_0113 malate dehydrogenase YP_003407391.1 PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; DNA glycosylase/AP lyase, H2TH DNA- binding; KEGG: sma:SAV_7289 formamidopyrimidine-DNA glycosylase YP_003407392.1 PFAM: beta-lactamase domain protein; KEGG: rop:ROP_50980 hypothetical protein YP_003407393.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: fal:FRAAL1456 putative oxidoreductase, Rieske [2Fe-2S] region YP_003407394.1 PFAM: protein of unknown function DUF485; KEGG: bcv:Bcav_3374 protein of unknown function DUF485 YP_003407395.1 TIGRFAM: SSS sodium solute transporter superfamily; PFAM: Na+/solute symporter; KEGG: kra:Krad_3659 SSS family solute/sodium (Na+) symporter YP_003407397.1 PFAM: manganese containing catalase; KEGG: mes:Meso_1876 manganese containing catalase YP_003407398.1 PFAM: ATP-binding region ATPase domain protein; KEGG: mva:Mvan_0011 integral membrane sensor signal transduction histidine kinase YP_003407399.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: mva:Mvan_0010 two component LuxR family transcriptional regulator YP_003407400.1 PFAM: membrane-flanked domain; KEGG: tfu:Tfu_1948 hypothetical protein YP_003407401.1 PFAM: membrane-flanked domain; KEGG: rer:RER_41850 hypothetical protein YP_003407402.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: kra:Krad_0166 rhodanese domain-containing protein YP_003407403.1 PFAM: glycoside hydrolase family 8; KEGG: mva:Mvan_4861 glycoside hydrolase family protein YP_003407404.1 PFAM: GtrA family protein; KEGG: pfo:Pfl01_1381 GtrA-like protein YP_003407405.1 PFAM: glycosyl transferase family 2; KEGG: gbm:Gbem_1049 glycosyl transferase family 2 YP_003407406.1 PFAM: glycosyl transferase group 1; KEGG: fre:Franean1_5300 glycosyl transferase group 1 YP_003407407.1 PFAM: glycoside hydrolase family 8; KEGG: ank:AnaeK_1847 glycosyl transferase family 2 YP_003407408.1 PFAM: glycosyl transferase family 2; KEGG: reu:Reut_C6029 cellulose synthase (UDP- forming) YP_003407409.1 KEGG: seg:SG1482 hypothetical protein YP_003407410.1 PFAM: 1, 4-beta cellobiohydrolase; KEGG: fre:Franean1_1657 glycoside hydrolase family protein YP_003407411.1 PFAM: AMP-dependent synthetase and ligase; KEGG: mva:Mvan_0905 AMP-dependent synthetase and ligase YP_003407412.1 PFAM: cytochrome P450; KEGG: sen:SACE_0125 putative cytochrome P450 YP_003407413.1 PFAM: SEC-C motif domain protein; KEGG: sen:SACE_0127 hypothetical protein YP_003407414.1 KEGG: bcv:Bcav_2998 putative sugar ABC transporter YP_003407415.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_2945 ABC transporter-related protein YP_003407416.1 PFAM: inner-membrane translocator; KEGG: kra:Krad_2944 monosaccharide-transporting ATPase YP_003407417.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: art:Arth_0219 LacI family transcription regulator YP_003407418.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: cpy:Cphy_1145 carbohydrate kinase FGGY YP_003407419.1 PFAM: class II aldolase/adducin family protein; KEGG: nca:Noca_0381 L-ribulose-5-phosphate 4- epimerase YP_003407420.1 PFAM: L-arabinose isomerase; KEGG: nca:Noca_0382 L-arabinose isomerase YP_003407421.1 PFAM: amidinotransferase; KEGG: stp:Strop_4517 arginine deiminase YP_003407422.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mjl:Mjls_2652 short-chain dehydrogenase/reductase SDR YP_003407423.1 KEGG: sgr:SGR_303 hypothetical protein YP_003407424.1 PFAM: FAD linked oxidase domain protein; KEGG: sen:SACE_4261 (S)-2-hydroxy-acid oxidase, subunit D YP_003407425.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sen:SACE_4263 glycolate oxidase, iron-sulfur subunit YP_003407426.1 KEGG: ade:Adeh_0244 LigA YP_003407428.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; Methyltransferase type 12; KEGG: rha:RHA1_ro05897 hypothetical protein YP_003407429.1 PFAM: TipAS antibiotic-recognition domain protein; regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: sco:SCO3413 transcriptional regulator YP_003407430.1 PFAM: protein of unknown function DUF664; KEGG: art:Arth_3852 hypothetical protein YP_003407431.1 PFAM: alpha/beta hydrolase fold; KEGG: mmi:MMAR_0112 haloalkane dehalogenase YP_003407432.1 PFAM: Domain of unknown function DUF1905; KEGG: bcv:Bcav_1963 domain of unknown function DUF1905 YP_003407433.1 PFAM: ABC-2 type transporter; KEGG: sen:SACE_0206 ABC-2 type transporter YP_003407434.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_0207 daunorubicin resistance ABC transporter ATPase subunit YP_003407435.1 KEGG: sma:SAV_7325 hypothetical protein YP_003407436.1 PFAM: protein of unknown function UPF0016; KEGG: kra:Krad_0157 hypothetical protein YP_003407437.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO1457 transport protein YP_003407438.1 SMART: Helix-turn-helix, AraC domain; KEGG: bcv:Bcav_0118 transcriptional regulator, AraC family YP_003407439.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_4455 glyoxalase/bleomycin resistance protein/dioxygenase YP_003407440.1 KEGG: nca:Noca_0169 circadian phase modifier CpmA; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003407441.1 KEGG: sen:SACE_0749 putative responce regulator with diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003407442.1 PFAM: prephenate dehydratase; amino acid-binding ACT domain protein; KEGG: saq:Sare_5032 prephenate dehydratase YP_003407443.1 PFAM: MMPL domain protein; KEGG: rha:RHA1_ro03267 hypothetical protein YP_003407444.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sco:SCO2209 transcriptional regulator YP_003407445.1 PFAM: chaperonin Cpn10; KEGG: sen:SACE_7319 GroES family molecular chaperone YP_003407446.1 PFAM: protein of unknown function DUF1025; KEGG: msm:MSMEG_6415 hypothetical protein YP_003407447.1 KEGG: tfu:Tfu_2440 inosine 5-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase family protein; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003407448.1 PFAM: glycosyl transferase family 2; chitin synthase; KEGG: krh:KRH_23180 putative glycosyltransferase YP_003407449.1 PFAM: PBS lyase HEAT domain protein repeat- containing protein; KEGG: rrs:RoseRS_1736 heat repeat-containing PBS lyase YP_003407450.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nca:Noca_1748 response regulator receiver YP_003407451.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; Hpt domain protein; CHASE3 domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; Hpt domain protein; response regulator receiver; histidine kinase HAMP region domain protein; KEGG: mag:amb3735 signal transduction histidine kinase YP_003407452.1 KEGG: msm:MSMEG_6413 seryl-tRNA synthetase; TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl- tRNA synthetase, class IIa-like YP_003407453.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: stp:Strop_4525 Cof-like hydrolase YP_003407454.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3; sucrose-6F-phosphate phosphohydrolase; KEGG: sgr:SGR_3642 putative hydrolase YP_003407455.1 PFAM: GAF domain protein; transcriptional regulator domain protein; KEGG: sen:SACE_2916 transcriptional regulator YP_003407456.1 PFAM: protein of unknown function DUF336; KEGG: msm:MSMEG_1544 PduO protein YP_003407457.1 PFAM: dehydratase small subunit; KEGG: msm:MSMEG_1546 coenzyme B12-dependent glycerol dehydrogenase small subunit YP_003407458.1 PFAM: dehydratase large subunit; KEGG: msm:MSMEG_1547 glycerol dehydratase large subunit YP_003407459.1 PFAM: dehydratase medium subunit; KEGG: msm:MSMEG_1548 propanediol utilization: dehydratase, medium subunit YP_003407460.1 PFAM: Diol/glycerol dehydratase reactivating factor large subunit; KEGG: yen:YE2733 putative propanediol utilization protein: diol dehydratase reactivation YP_003407461.1 KEGG: msm:MSMEG_1550 PduH protein YP_003407462.1 PFAM: Protein of unknown function DUF2587; KEGG: rer:RER_02610 hypothetical protein YP_003407463.1 KEGG: stp:Strop_1769 cysteine desulfurase family protein; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V YP_003407464.1 TIGRFAM: NAD(P)H quinone oxidoreductase, PIG3 family; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sma:SAV_4368 quinone oxidoreductase YP_003407465.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bcv:Bcav_1816 transcriptional regulator, AraC family YP_003407466.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro05328 CoA ligase YP_003407467.1 PFAM: thioesterase superfamily protein; KEGG: rxy:Rxyl_0908 phenylacetic acid degradation- related protein YP_003407468.1 KEGG: saq:Sare_0649 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003407469.1 PFAM: MaoC domain protein dehydratase; KEGG: sgr:SGR_5802 hypothetical protein YP_003407470.1 PFAM: beta-lactamase; KEGG: sen:SACE_2212 beta-lactamase YP_003407471.1 PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein; KEGG: bcv:Bcav_2752 histone family protein DNA- binding protein YP_003407472.1 PFAM: aldo/keto reductase; KEGG: sco:SCO4109 oxidoreductase YP_003407473.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: ace:Acel_0529 diguanylate phosphodiesterase YP_003407474.1 PFAM: protein of unknown function UPF0126; KEGG: rpa:RPA2993 hypothetical protein YP_003407475.1 PFAM: Amidase; KEGG: aau:AAur_pTC20148 amidase YP_003407476.1 PFAM: acyl-CoA oxidase domain protein; acyl-CoA dehydrogenase domain protein; KEGG: sen:SACE_7372 acyl-CoA oxidase YP_003407477.1 PFAM: regulatory protein TetR; KEGG: kra:Krad_4029 TetR family transcriptional regulator YP_003407478.1 KEGG: nca:Noca_2847 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003407479.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: stp:Strop_0141 3-ketoacyl-(acyl-carrier- protein) reductase YP_003407480.1 PFAM: MaoC domain protein dehydratase; KEGG: sen:SACE_7302 MaoC-like dehydratase YP_003407481.1 PFAM: glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 TIM barrel; KEGG: scl:sce3052 glycoside hydrolase family protein YP_003407482.1 PFAM: extracellular solute-binding protein family 5; KEGG: kra:Krad_3863 extracellular solute-binding protein YP_003407483.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_3862 binding-protein-dependent transport systems inner membrane component YP_003407484.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_3861 binding-protein-dependent transport systems inner membrane component YP_003407485.1 KEGG: kra:Krad_3860 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003407486.1 KEGG: kra:Krad_3859 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003407487.1 TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sen:SACE_4416 pyridoxamine 5'-phosphate oxidase-related,FMN-binding protein YP_003407488.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; Methionine biosynthesis MetW protein; KEGG: ana:alr5231 hypothetical protein YP_003407489.1 KEGG: fra:Francci3_0140 hypothetical protein YP_003407491.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: mlu:Mlut_00860 hypothetical protein YP_003407492.1 KEGG: mlu:Mlut_00850 hypothetical protein YP_003407493.1 PFAM: conserved hypothetical protein; KEGG: cgb:cg3127 hypothetical protein YP_003407494.1 PFAM: UspA domain protein; KEGG: ach:Achl_0593 UspA domain protein YP_003407495.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: stp:Strop_0862 geranylgeranyl reductase YP_003407496.1 PFAM: conserved hypothetical protein; KEGG: bur:Bcep18194_A5601 hypothetical protein YP_003407497.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: fra:Francci3_3798 endonuclease/exonuclease/phosphatase YP_003407498.1 TIGRFAM: naphthoate synthase; PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nca:Noca_0258 1,4-dihydroxy-2-naphthoate synthase YP_003407500.1 PFAM: regulatory protein TetR; KEGG: kra:Krad_2037 TetR family transcriptional regulator YP_003407501.1 PFAM: regulatory protein TetR; KEGG: mrd:Mrad2831_4515 TetR family transcriptional regulator YP_003407502.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mkm:Mkms_3978 oxidoreductase domain- containing protein YP_003407503.1 PFAM: glycosyl transferase group 1; KEGG: mjl:Mjls_3920 glycosyl transferase, group 1 YP_003407504.1 PFAM: glycosyl transferase family 2; KEGG: tfu:Tfu_1730 putative glucosyl-3- phosphoglycerate synthase YP_003407505.1 PFAM: glycosyl transferase family 2; KEGG: stp:Strop_2961 putative glucosyl-3- phosphoglycerate synthase YP_003407506.1 PFAM: membrane protein of unknown function; KEGG: sco:SCO6527 hypothetical protein YP_003407507.1 PFAM: SNARE associated Golgi protein; KEGG: sgr:SGR_1143 putative integral membrane protein YP_003407508.1 KEGG: sgr:SGR_1142 hypothetical protein YP_003407509.1 KEGG: aau:AAur_1197 hypothetical protein YP_003407510.1 PFAM: molybdopterin oxidoreductase Fe4S4 region; KEGG: kra:Krad_1601 molybdopterin oxidoreductase Fe4s4 region YP_003407511.1 PFAM: molydopterin dinucleotide-binding region; molybdopterin oxidoreductase; KEGG: rxy:Rxyl_2724 formate dehydrogenase YP_003407512.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: msm:MSMEG_1847 4Fe-4S ferredoxin, iron-sulfur binding protein YP_003407513.1 PFAM: Polysulphide reductase NrfD; KEGG: sen:SACE_3564 polysulphide reductase, NrfD YP_003407514.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcv:Bcav_2376 short-chain dehydrogenase/reductase SDR YP_003407515.1 PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: cyn:Cyan7425_3212 glycosyl transferase group 1 YP_003407516.1 PFAM: ABC-2 type transporter; KEGG: cag:Cagg_1558 ABC-2 type transporter YP_003407517.1 KEGG: mrd:Mrad2831_5905 hypothetical protein YP_003407518.1 KEGG: gur:Gura_3796 glycosyl transferase, group 1 YP_003407519.1 PFAM: glycosyl transferase family 2; KEGG: art:Arth_3199 glycosyl transferase family protein YP_003407520.1 PFAM: glycosyl transferase group 1; KEGG: nar:Saro_0752 glycosyl transferase, group 1 YP_003407521.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; PFAM: glycosyl transferase WecB/TagA/CpsF; KEGG: bav:BAV2638 capsular polysaccharide biosynthesis glucosyltransferase YP_003407522.1 KEGG: xac:XAC0048 hypothetical protein YP_003407523.1 KEGG: xac:XAC2151 YapH protein YP_003407524.1 KEGG: rha:RHA1_ro05453 protein-tyrosine kinase; TIGRFAM: capsular exopolysaccharide family; PFAM: lipopolysaccharide biosynthesis protein YP_003407525.1 PFAM: aminoglycoside phosphotransferase; KEGG: noc:Noc_1968 UbiE/COQ5 methyltransferase YP_003407527.1 KEGG: xca:xccb100_4118 thymidylate kinase YP_003407528.1 PFAM: C-methyltransferase; Methyltransferase domain protein; Methyltransferase type 12; KEGG: sco:SCO0392 methyltransferase YP_003407529.1 KEGG: bra:BRADO4833 hypothetical protein YP_003407530.1 PFAM: C-methyltransferase; KEGG: rha:RHA1_ro05743 transferase YP_003407531.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: msm:MSMEG_5977 dTDP-4-dehydrorhamnose 3,5- epimerase YP_003407532.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; KEGG: sco:SCO0395 epimerase/dehydratase YP_003407533.1 PFAM: LmbE family protein; KEGG: sco:SCO0394 hypothetical protein YP_003407534.1 KEGG: sco:SCO0393 transferase YP_003407535.1 PFAM: glycosyl transferase group 1; KEGG: kra:Krad_0892 glycosyl transferase group 1 YP_003407536.1 KEGG: fal:FRAAL1794 hypothetical protein YP_003407537.1 PFAM: glycosyl transferase family 2; KEGG: kra:Krad_0566 glycosyltransferase-like protein YP_003407538.1 KEGG: kra:Krad_1048 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003407539.1 KEGG: hypothetical protein YP_003407540.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: mav:MAV_4319 transposase, mutator family protein YP_003407543.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: rca:Rcas_3084 NAD-dependent epimerase/dehydratase YP_003407545.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: mlu:Mlut_08810 cell envelope-related function transcriptional attenuator common domain protein YP_003407546.1 PFAM: glycoside hydrolase family 3 domain protein; KEGG: bcv:Bcav_3777 beta-N-acetylhexosaminidase YP_003407547.1 SMART: protein phosphatase 2C domain protein; KEGG: ach:Achl_1336 protein serine/threonine phosphatase YP_003407548.1 PFAM: acyltransferase 3; KEGG: cmi:CMM_2512 putative acyltransferase YP_003407549.1 PFAM: glycoside hydrolase family 16; KEGG: gdj:Gdia_1873 glycoside hydrolase family 16 YP_003407550.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: cms:CMS_0167 putative Wzz-related membrane protein YP_003407551.1 PFAM: glycosyl transferase family 2; KEGG: rpd:RPD_1648 glycosyl transferase family protein YP_003407552.1 PFAM: ABC-2 type transporter; KEGG: cag:Cagg_1558 ABC-2 type transporter YP_003407553.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: ote:Oter_2770 ABC transporter related YP_003407554.1 PFAM: glycosyl transferase family 2; KEGG: lxx:Lxx04970 rhamnosyltransferase YP_003407555.1 KEGG: sil:SPO3864 hypothetical protein YP_003407556.1 PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL6117 putative glycosyltransferase protein YP_003407557.1 PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0735 putative glycosyltransferase protein YP_003407558.1 KEGG: gdj:Gdia_0732 hypothetical protein YP_003407559.1 KEGG: rle:RL3827 hypothetical protein YP_003407560.1 PFAM: FAD dependent oxidoreductase; KEGG: ara:Arad_9376 hypothetical protein YP_003407561.1 PFAM: glycosyl transferase group 1; KEGG: mno:Mnod_0871 glycosyl transferase group 1 YP_003407562.1 PFAM: polysaccharide biosynthesis protein; KEGG: mlu:Mlut_05840 membrane protein involved in the export of O-antigen and teichoic acid YP_003407563.1 PFAM: glycosyl transferase group 1; glycosyl transferase family 2; KEGG: cyn:Cyan7425_3212 glycosyl transferase group 1 YP_003407564.1 PFAM: glycosyl transferase group 1; KEGG: tro:trd_0452 glycosyl transferases group 1 YP_003407565.1 PFAM: glycosyl transferase family 2; KEGG: cyn:Cyan7425_1730 glycosyl transferase family 2 YP_003407566.1 PFAM: Methyltransferase type 11; KEGG: met:M446_3307 glycosyl transferase family protein YP_003407567.1 PFAM: glycosyl transferase family 2; KEGG: nar:Saro_2628 glycosyl transferase family protein YP_003407568.1 PFAM: polysaccharide deacetylase; KEGG: met:M446_3306 polysaccharide deacetylase YP_003407569.1 KEGG: bcm:Bcenmc03_6751 glycosyl transferase family protein YP_003407570.1 PFAM: glycosyl transferase group 1; KEGG: rha:RHA1_ro05732 hypothetical protein YP_003407571.1 PFAM: glycosyl transferase group 1; KEGG: rca:Rcas_4314 glycosyl transferase group 1 YP_003407572.1 PFAM: glycosyl transferase family 2; KEGG: mpt:Mpe_A0735 putative glycosyltransferase protein YP_003407573.1 KEGG: kra:Krad_1048 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003407574.1 KEGG: kra:Krad_0013 undecaprenyl-phosphate galactose phosphotransferase; TIGRFAM: exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase; PFAM: sugar transferase YP_003407577.1 KEGG: kra:Krad_3900 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase YP_003407578.1 PFAM: GMC oxidoreductase; FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: bra:BRADO2203 hypothetical protein YP_003407579.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: sma:SAV_364 IS110 family transposase YP_003407580.1 KEGG: GK21299 gene product from transcript GK21299- RA YP_003407581.1 PFAM: glycosyl transferase family 2; KEGG: fra:Francci3_1586 glycosyl transferase family protein YP_003407582.1 KEGG: hypothetical protein YP_003407583.1 PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL6118 putative glycosyltransferase YP_003407584.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: sco:SCO2988 UDP-glucose 4-epimerase YP_003407585.1 PFAM: acyltransferase 3; KEGG: ach:Achl_2626 acyltransferase 3 YP_003407586.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: fal:FRAAL1880 mixed type I polyketide synthase-non ribosomal peptide synthetase YP_003407587.1 PFAM: glycosyl transferase family 2; KEGG: fra:Francci3_1581 glycosyl transferase family protein YP_003407589.1 KEGG: fal:FRAAL6112 putative serine/threonine protein kinase; putative membrane protein YP_003407590.1 PFAM: polysaccharide biosynthesis protein; KEGG: mva:Mvan_2675 AMP-dependent synthetase and ligase YP_003407591.1 KEGG: rop:ROP_58310 hypothetical protein YP_003407592.1 KEGG: rop:ROP_54530 hypothetical protein YP_003407593.1 PFAM: polysaccharide deacetylase; KEGG: sma:SAV_6571 polysaccharide deacetylase YP_003407594.1 PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL6119 putative succinoglycan biosynthesis protein YP_003407596.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; Thioesterase; KEGG: cti:RALTA_B0309 putative acetoacetyl-coenzyme A synthetase YP_003407597.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: ppd:Ppro_3119 4'-phosphopantetheinyl transferase YP_003407598.1 PFAM: glycoside hydrolase family 16; KEGG: fal:FRAAL6120 hypothetical protein YP_003407599.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: tro:trd_1797 hypothetical protein YP_003407600.1 PFAM: glycosyl transferase family 2; KEGG: fal:FRAAL6118 putative glycosyltransferase YP_003407601.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: sma:SAV_7440 hypothetical protein YP_003407602.1 PFAM: DoxX family protein; KEGG: sen:SACE_0149 DoxX YP_003407603.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sen:SACE_2253 putative glycerophosphatase YP_003407604.1 PFAM: protein of unknown function DUF1470; KEGG: sen:SACE_5922 hypothetical protein YP_003407605.1 PFAM: major facilitator superfamily MFS_1; KEGG: cmi:CMM_2809 putative sugar MFS permease YP_003407606.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: rxy:Rxyl_1052 lactate 2-monooxygenase YP_003407607.1 KEGG: GK19423 gene product from transcript GK19423- RA YP_003407608.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: fre:Franean1_1577 MarR family transcriptional regulator YP_003407609.1 TIGRFAM: hydrolase, HAD-superfamily, subfamily IIIA; histidinol-phosphate phosphatase family protein; HAD- superfamily hydrolase, subfamily IA, variant 3; HAD- superfamily hydrolase, subfamily IA, variant 1; PFAM: glycosyl transferase family 2; Haloacid dehalogenase domain protein hydrolase; KEGG: rxy:Rxyl_0716 HAD family hydrolase YP_003407610.1 PFAM: glycosyl transferase family 9; KEGG: sen:SACE_5573 glycosyl transferase family protein YP_003407611.1 KEGG: sco:SCO6184 transferase YP_003407612.1 PFAM: glycosyl transferase group 1; KEGG: mav:MAV_4082 transferase YP_003407613.1 PFAM: sugar isomerase (SIS); KEGG: sco:SCO6186 phosphoheptose isomerase YP_003407614.1 TIGRFAM: rfaE bifunctional protein; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase; PfkB domain protein; KEGG: sco:SCO6187 bifunctional synthase/transferase YP_003407615.1 PFAM: glycosyl transferase family 9; KEGG: sco:SCO6188 transferase YP_003407616.1 SMART: von Willebrand factor type A; KEGG: tfu:Tfu_2266 von Willebrand factor, type A YP_003407617.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: fal:FRAAL5747 dTDP-glucose 4-6-dehydratase YP_003407618.1 KEGG: aau:AAur_0071 hypothetical protein YP_003407619.1 PFAM: Prephenate dehydrogenase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase NAD-binding; KEGG: sen:SACE_0231 prephenate dehydrogenase YP_003407620.1 PFAM: thioesterase superfamily protein; KEGG: mta:Moth_0402 phenylacetic acid degradation protein PaaD YP_003407621.1 PFAM: O-methyltransferase family 3; KEGG: fal:FRAAL5009 caffeoyl O-methyltransferase (partial match) YP_003407622.1 KEGG: mab:MAB_0267 hypothetical protein YP_003407623.1 TIGRFAM: HAD-superfamily hydrolase, phosphatase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sal:Sala_2121 epoxide hydrolase domain- containing phosphatase YP_003407624.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: fal:FRAAL0635 tRNA-specific adenosine deaminase YP_003407625.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: nfa:nfa31920 putative serine/threonine protein kinase YP_003407627.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sco:SCO1362 integral membrane protein YP_003407628.1 KEGG: sen:SACE_0251 putative DNA polymerase III gamma subunit; TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_003407629.1 PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: fre:Franean1_4113 activator of HSP90 ATPase 1 family protein YP_003407630.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: fre:Franean1_4112 ArsR family transcriptional regulator YP_003407631.1 PFAM: conserved hypothetical protein; KEGG: rop:ROP_41370 hypothetical protein YP_003407632.1 KEGG: tfu:Tfu_0044 recombination protein RecR; TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain protein; Zinc finger C4-type, RecR; SMART: Toprim sub domain protein YP_003407633.1 PFAM: extracellular solute-binding protein family 5; KEGG: sen:SACE_0257 dipeptide ABC transporter substrate-binding protein YP_003407634.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_2997 binding-protein-dependent transport systems inner membrane component YP_003407635.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_0259 oligopeptide ABC transporter (permease) YP_003407636.1 KEGG: stp:Strop_0219 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003407637.1 KEGG: sen:SACE_0261 oligopeptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003407638.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: mpl:Mpal_1282 Rieske (2Fe-2S) domain protein YP_003407639.1 PFAM: protein of unknown function DUF477; KEGG: kra:Krad_1453 hypothetical protein YP_003407640.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mul:MUL_0158 hypothetical protein YP_003407641.1 TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: rha:RHA1_ro02455 hypothetical protein YP_003407642.1 KEGG: tmz:Tmz1t_1382 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003407643.1 PFAM: Pirin domain protein; KEGG: sma:SAV_7355 pirin-like protein YP_003407644.1 KEGG: fre:Franean1_5413 hypothetical protein YP_003407645.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: kra:Krad_3204 UDP-N-acetylmuramyl-tripeptide synthetase YP_003407646.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_0784 ABC transporter related YP_003407647.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: kra:Krad_0046 putative monovalent cation/H+ antiporter subunit A YP_003407648.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: rsa:RSal33209_2209 potassium efflux system protein YP_003407649.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: ach:Achl_3658 NADH dehydrogenase (quinone) YP_003407650.1 KEGG: kra:Krad_0043 multisubunit Na+/H+ antiporter MnhE subunit-like protein YP_003407651.1 PFAM: multiple resistance and pH regulation protein F; KEGG: kra:Krad_0042 multiple resistance and pH regulation protein F YP_003407652.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: bcv:Bcav_3813 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_003407653.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mgi:Mflv_5064 glyoxalase/bleomycin resistance protein/dioxygenase YP_003407654.1 TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain; KEGG: kra:Krad_3377 2-isopropylmalate synthase YP_003407655.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcv:Bcav_3642 transcriptional regulator, XRE family YP_003407656.1 PFAM: phospholipase D/Transphosphatidylase; SMART: phospholipase D/Transphosphatidylase; KEGG: msm:MSMEG_0375 phospholipase D family protein YP_003407657.1 TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein; KEGG: saq:Sare_0265 aspartate kinase YP_003407658.1 KEGG: ace:Acel_2011 aspartate-semialdehyde dehydrogenase; TIGRFAM: aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003407659.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sen:SACE_0309 peptide hydrolase YP_003407660.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: nca:Noca_2719 hypothetical protein YP_003407661.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: fre:Franean1_1954 hypothetical protein YP_003407662.1 PFAM: metallophosphoesterase; KEGG: nfa:nfa3370 hypothetical protein YP_003407663.1 PFAM: Protein of unknown function YOR215C, mitochondrial; KEGG: nca:Noca_0325 GatB/YqeY domain-containing protein YP_003407664.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rop:ROP_42240 penicillin-binding protein 1 YP_003407665.1 PFAM: Anion-transporting ATPase; KEGG: rer:RER_04650 anion-transporting ATPase YP_003407666.1 PFAM: Anion-transporting ATPase; KEGG: fal:FRAAL6550 putative ion-transporting ATPase YP_003407667.1 KEGG: mlu:Mlut_18310 hypothetical protein YP_003407668.1 PFAM: Endoribonuclease L-PSP; KEGG: rer:RER_04680 hypothetical protein YP_003407669.1 PFAM: NUDIX hydrolase; KEGG: tfu:Tfu_0115 hypothetical protein YP_003407670.1 PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: saq:Sare_4762 Crp/FNR family transcriptional regulator YP_003407671.1 KEGG: rop:ROP_42320 hypothetical protein YP_003407672.1 KEGG: ach:Achl_3166 endonuclease III; TIGRFAM: endonuclease III; PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop YP_003407673.1 PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: saq:Sare_4758 redoxin domain-containing protein YP_003407674.1 PFAM: NUDIX hydrolase; KEGG: fre:Franean1_0325 NUDIX hydrolase YP_003407675.1 PFAM: blue (type 1) copper domain protein; KEGG: fre:Franean1_0324 blue (type1) copper domain- containing protein YP_003407676.1 PFAM: Colicin V production protein; peptidase S1 and S6 chymotrypsin/Hap; KEGG: saq:Sare_4756 peptidase S1 and S6 chymotrypsin/Hap YP_003407677.1 PFAM: alpha/beta hydrolase fold; KEGG: fal:FRAAL6562 putative hydrolase YP_003407678.1 PFAM: protein of unknown function DUF1469; KEGG: cjk:jk1966 hypothetical protein YP_003407679.1 TIGRFAM: acetate/CoA ligase; PFAM: AMP-dependent synthetase and ligase; KEGG: sma:SAV_4599 acetyl-CoA synthetase YP_003407680.1 PFAM: ferric iron reductase; KEGG: rop:ROP_62850 hypothetical protein YP_003407681.1 TIGRFAM: GTP-binding proten HflX; PFAM: GTP-binding protein HSR1-related; KEGG: tfu:Tfu_0820 small GTP-binding protein domain- containing protein YP_003407682.1 PFAM: Queuosine biosynthesis protein; KEGG: rxy:Rxyl_2617 putative S- adenosylmethionine:tRNA ribosyltransferase-isomerase YP_003407683.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rha:RHA1_ro00215 short chain dehydrogenase YP_003407684.1 KEGG: fra:Francci3_3453 MerR family transcriptional regulator; TIGRFAM: redox-sensitive transcriptional activator SoxR; PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_003407685.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: msm:MSMEG_0043 extradiol ring-cleavage dioxygenase, class III enzyme, subunit B YP_003407686.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: stp:Strop_3164 helix-turn-helix domain- containing protein YP_003407687.1 KEGG: sgr:SGR_5218 hypothetical protein YP_003407688.1 TIGRFAM: uroporphyrin-III C-methyltransferase; siroheme synthase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: nca:Noca_2600 uroporphyrinogen-III C- methyltransferase YP_003407689.1 KEGG: tfu:Tfu_2222 cob(II)yrinic acid a,c-diamide reductase; TIGRFAM:nicotinate-nucleotide/dimethylbenzimidazole phosphoribosyltransferase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase YP_003407690.1 PFAM: aminotransferase class I and II; aminotransferase class V; KEGG: stp:Strop_3547 hypothetical protein YP_003407691.1 KEGG: nfa:nfa40800 hypothetical protein YP_003407692.1 KEGG: sco:SCO5958 cobalt transport system ATP binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003407693.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: sco:SCO5959 cobalt transport integral membrane protein YP_003407694.1 PFAM: Cobalt transport protein CbiN; KEGG: pac:PPA0432 cobalt transport protein CbiN YP_003407695.1 TIGRFAM: cobalamin biosynthesis protein CbiM; PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: sco:SCO5961 cobalt transport protein CbiM YP_003407696.1 TIGRFAM: cobyrinic acid a,c-diamide synthase; PFAM: Cobyrinic acid ac-diamide synthase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: sgr:SGR_5641 cobyrinic acid a,c-diamide synthase YP_003407697.1 KEGG: mgi:Mflv_4049 cob(I)yrinic acid a,c-diamide adenosyltransferase; TIGRFAM: cob(I)alamin adenosyltransferase; PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_003407698.1 KEGG: sco:SCO1850 chelatase; TIGRFAM: cobaltochelatase subunit; PFAM: ATPase associated with various cellular activities AAA_5; von Willebrand factor type A; SMART: von Willebrand factor type A; AAA ATPase YP_003407699.1 KEGG: ccs:CCNA_03497 hypothetical protein YP_003407700.1 KEGG: gox:GOX1145 transcriptional regulator YP_003407701.1 TIGRFAM: membrane protein AbrB duplication; PFAM: putative ammonia monooxygenase; KEGG: kra:Krad_3869 putative ammonia monooxygenase YP_003407702.1 KEGG: sen:SACE_5636 hypothetical protein YP_003407703.1 KEGG: kra:Krad_1943 hypothetical protein YP_003407704.1 PFAM: Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: fre:Franean1_4877 methyltransferase type 11 YP_003407705.1 KEGG: kra:Krad_3034 hypothetical protein YP_003407707.1 KEGG: rer:RER_46760 hypothetical protein YP_003407708.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: bbt:BBta_6238 hypothetical protein YP_003407709.1 PFAM: thioesterase superfamily protein; KEGG: mva:Mvan_3023 thioesterase superfamily protein YP_003407710.1 TIGRFAM: cobyric acid synthase CobQ; PFAM: CobB/CobQ domain protein glutamine amidotransferase; Cobyrinic acid ac-diamide synthase; KEGG: sco:SCO1848 cobyric acid synthase YP_003407711.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: nca:Noca_1494 phospholipid/glycerol acyltransferase YP_003407712.1 PFAM: ANTAR domain protein; PAS fold-3 domain protein; KEGG: nfa:nfa20280 putative transcription antitermination regulator YP_003407713.1 TIGRFAM: cobalamin biosynthesis protein CobD; PFAM: cobalamin biosynthesis protein CbiB; KEGG: stp:Strop_3555 cobalamin biosynthesis protein YP_003407714.1 KEGG: kra:Krad_0402 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003407715.1 KEGG: sen:SACE_5944 precorrin-6Y C(5,15)- methyltransferase (decarboxylating); TIGRFAM: precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit; precorrin-6Y C5,15- methyltransferase (decarboxylating), CbiT subunit; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; Methyltransferase type 12 YP_003407716.1 KEGG: sen:SACE_5945 precorrin-4 C11- methyltransferase; TIGRFAM: precorrin-4 C11-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_003407717.1 TIGRFAM: cobalamin biosynthesis protein CbiD; PFAM: cobalamin (vitamin B12) biosynthesis CbiD protein; KEGG: sen:SACE_5949 cobalt-precorrin-6A synthase YP_003407718.1 KEGG: sen:SACE_5950 precorrin-6A reductase; TIGRFAM: precorrin-6x reductase; PFAM: Precorrin-6x reductase CbiJ/CobK YP_003407719.1 KEGG: mgi:Mflv_2014 hypothetical protein YP_003407720.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ach:Achl_1821 haloacid dehalogenase domain protein hydrolase YP_003407721.1 PFAM: ThiJ/PfpI domain protein; KEGG: sfu:Sfum_2512 ThiJ/PfpI domain-containing protein YP_003407722.1 SMART: regulatory protein MarR; KEGG: sma:SAV_4553 MarR family transcriptional regulator YP_003407723.1 KEGG: nfa:nfa31350 hypothetical protein YP_003407724.1 PFAM: major facilitator superfamily MFS_1; KEGG: fra:Francci3_2282 major facilitator transporter YP_003407725.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: fal:FRAAL3579 putative FMN-dependent alpha- hydroxy acid dehydrogenase YP_003407726.1 TIGRFAM: precorrin-3B C17-methyltransferase; precorrin-2 C20-methyltransferase; PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sen:SACE_5951 precorrin-3B C17- methyltransferase YP_003407727.1 PFAM: Precorrin-8X methylmutase CbiC/CobH; KEGG: sco:SCO3282 precorrin-8X methylmutase YP_003407728.1 TIGRFAM: precorrin-3B synthase; PFAM: nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: nfa:nfa31400 hypothetical protein YP_003407729.1 KEGG: sen:SACE_1735 hypothetical protein YP_003407730.1 KEGG: tfu:Tfu_2133 hypothetical protein YP_003407731.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: saq:Sare_0041 XRE family transcriptional regulator YP_003407732.1 KEGG: met:M446_2019 hypothetical protein YP_003407735.1 KEGG: sen:SACE_5955 cobaltochelatase subunit CobN; TIGRFAM: cobaltochelatase, CobN subunit; PFAM: CobN/magnesium chelatase YP_003407736.1 KEGG: hypothetical protein YP_003407737.1 PFAM: cobalamin-5-phosphate synthase CobS; KEGG: sgr:SGR_5332 putative cobalamin 5'-phosphate synthase YP_003407738.1 PFAM: cobalbumin biosynthesis protein; KEGG: sen:SACE_1651 cobinamide kinase / conamide phosphate guanylyltransferase YP_003407739.1 PFAM: Phosphoglycerate mutase; KEGG: pac:PPA0417 phosphoglycerate mutase family protein YP_003407740.1 KEGG: tfu:Tfu_0130 hypothetical protein YP_003407741.1 PFAM: aldo/keto reductase; KEGG: mmi:MMAR_3520 hypothetical protein YP_003407742.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sen:SACE_0365 HAD family hydrolase YP_003407743.1 KEGG: sma:SAV_4605 septum site determining protein YP_003407744.1 PFAM: type II secretion system protein E; KEGG: rha:RHA1_ro04340 conjugal transfer protein YP_003407745.1 KEGG: nfa:nfa3600 hypothetical protein YP_003407746.1 PFAM: Type II secretion system F domain; KEGG: tfu:Tfu_0126 putative integral membrane protein YP_003407747.1 KEGG: ace:Acel_1979 hypothetical protein YP_003407748.1 PFAM: TadE family protein; KEGG: kra:Krad_0480 TadE family protein YP_003407749.1 KEGG: mab:MAB_0475 hypothetical protein YP_003407750.1 KEGG: msm:MSMEG_4458 transmembrane transport protein YP_003407751.1 PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: art:Arth_0847 XRE family transcriptional regulator YP_003407752.1 PFAM: DEAD/DEAH box helicase domain protein; Protein of unknown function DUF1998; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: saq:Sare_4414 DEAD/DEAH box helicase domain- containing protein YP_003407753.1 KEGG: stp:Strop_4030 membrane-bound proton- translocating pyrophosphatase; TIGRFAM: V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H pyrophosphatase YP_003407754.1 KEGG: ace:Acel_0800 hypothetical protein YP_003407755.1 PFAM: protein of unknown function DUF1023; KEGG: sgr:SGR_3828 hypothetical protein YP_003407756.1 KEGG: fre:Franean1_0309 DNA topoisomerase I; TIGRFAM: DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain protein YP_003407757.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: kra:Krad_0454 methyltransferase type 11 YP_003407758.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: msm:MSMEG_4913 LpqM protein YP_003407759.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sma:SAV_3570 trans-aconitate methyltransferase YP_003407760.1 KEGG: stp:Strop_4023 thymidylate kinase; TIGRFAM: thymidylate kinase; PFAM: thymidylate kinase YP_003407761.1 KEGG: nfa:nfa3680 DNA polymerase III subunit delta'; TIGRFAM: DNA polymerase III, delta prime subunit; SMART: AAA ATPase YP_003407762.1 PFAM: Inorganic pyrophosphatase; KEGG: nca:Noca_0438 inorganic diphosphatase YP_003407763.1 TIGRFAM: D-alanyl-D-alanine carboxypeptidase/D- alanyl-D-alanine-endopeptidase; PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: saq:Sare_4750 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_003407764.1 TIGRFAM: conserved hypothetical protein; PFAM: Protein of unknown function DUF2342; KEGG: fal:FRAAL6586 hypothetical protein YP_003407765.1 TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; KEGG: sco:SCO3406 hypothetical protein YP_003407766.1 KEGG: sen:SACE_0395 hypoxanthine-guanine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003407767.1 KEGG: stp:Strop_4308 ATP-dependent metalloprotease FtsH; TIGRFAM: ATP-dependent metalloprotease FtsH; PFAM: peptidase M41; peptidase M41 FtsH extracellular; AAA ATPase central domain protein; SMART: AAA ATPase YP_003407768.1 KEGG: mbt:JTY_3674 GTP cyclohydrolase I; TIGRFAM: GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_003407769.1 KEGG: saq:Sare_4732 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003407770.1 TIGRFAM: dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase; KEGG: tfu:Tfu_2891 dihydroneopterin aldolase YP_003407771.1 KEGG: sen:SACE_0400 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase; TIGRFAM:2-amino-4-hydroxy-6-hydroxymethyldihydropter idinepyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin- pyrophosphokinase HPPK YP_003407772.1 KEGG: rer:RER_06300 hypothetical protein YP_003407773.1 KEGG: sgr:SGR_4097 putative ABC transporter ATP- binding protein; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase YP_003407774.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: saq:Sare_4725 binding-protein-dependent transport systems inner membrane component YP_003407775.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: stp:Strop_4289 binding-protein-dependent transport systems inner membrane component YP_003407776.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: bcv:Bcav_2671 substrate-binding region of ABC- type glycine betaine transport system YP_003407777.1 KEGG: ace:Acel_0612 hypothetical protein YP_003407778.1 SMART: LamG domain protein jellyroll fold domain protein; KEGG: cmi:CMM_0825 putative cell surface protein YP_003407779.1 KEGG: mva:Mvan_5366 hypothetical protein YP_003407780.1 PFAM: Domain of unknown function DUF2520; NADP oxidoreductase coenzyme F420-dependent; Putative oxidoreductase/dehydrogenase, Rossmann-like domain; KEGG: sco:SCO3384 hypothetical protein YP_003407781.1 KEGG: nca:Noca_0460 pantothenate synthetase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_003407782.1 KEGG: sco:SCO0978 aspartate alpha-decarboxylase; TIGRFAM: aspartate 1-decarboxylase; PFAM: aspartate decarboxylase YP_003407783.1 TIGRFAM: L-aspartate oxidase; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: stp:Strop_4280 L-aspartate oxidase YP_003407784.1 KEGG: saq:Sare_4714 nicotinate-nucleotide pyrophosphorylase; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_003407785.1 TIGRFAM: transcriptional activator, Baf family; PFAM: Bvg accessory factor; KEGG: stp:Strop_4278 Baf family transcriptional activator YP_003407786.1 KEGG: sen:SACE_0409 lysyl-tRNA synthetase class II; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_003407787.1 KEGG: mab:MAB_0545 protein lsr2 precursor YP_003407790.1 PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: sen:SACE_0414 putative ATP-dependent Clp protease YP_003407791.1 PFAM: HhH-GPD family protein; helix-hairpin-helix motif; iron-sulfur cluster loop; SMART: HhH-GPD family protein; KEGG: sen:SACE_0432 A/G-specific adenine glycosylase YP_003407792.1 KEGG: msm:MSMEG_6081 hypothetical protein YP_003407793.1 PFAM: DNA integrity scanning, DisA, linker region; protein of unknown function DUF147; helix-hairpin-helix motif; KEGG: saq:Sare_4700 DNA integrity scanning protein DisA YP_003407794.1 TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase; KEGG: sen:SACE_0436 DNA repair protein RadA YP_003407795.1 KEGG: saq:Sare_4698 hypothetical protein YP_003407796.1 PFAM: deoxyribodipyrimidine photolyase-related protein; DNA photolyase FAD-binding; KEGG: kra:Krad_3082 deoxyribodipyrimidine photolyase-related protein YP_003407797.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: ace:Acel_0379 ECF subfamily RNA polymerase sigma-24 factor YP_003407798.1 KEGG: mmr:Mmar10_0078 hypothetical protein YP_003407799.1 PFAM: UbiA prenyltransferase; KEGG: sgr:SGR_473 hypothetical protein YP_003407800.1 PFAM: transcription factor CarD; KEGG: fal:FRAAL6525 putative CarD-like transcriptional regulator YP_003407801.1 TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; KEGG: nfa:nfa4360 2-C-methyl-D-erythritol 4- phosphate cytidylyltransferase YP_003407802.1 KEGG: mmi:MMAR_5081 2-C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4- cyclodiphosphate synthase; PFAM: MECDP-synthase YP_003407803.1 KEGG: nca:Noca_4021 cysteinyl-tRNA synthetase; TIGRFAM: cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR; tRNA synthetase class I (M) YP_003407804.1 TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: mkm:Mkms_4822 RNA methyltransferase YP_003407805.1 KEGG: rop:ROP_53610 hypothetical protein YP_003407806.1 PFAM: protein of unknown function DUF445; KEGG: ach:Achl_0542 protein of unknown function DUF445 YP_003407807.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: cmi:CMM_1278 putative serine protease YP_003407808.1 PFAM: conserved hypothetical protein; KEGG: sen:SACE_3493 putative ABC transport system permease protein YP_003407809.1 PFAM: UspA domain protein; KEGG: sco:SCO7299 stress-inducible protein YP_003407810.1 KEGG: rha:RHA1_ro08278 hypothetical protein YP_003407811.1 KEGG: fre:Franean1_2844 hypothetical protein YP_003407812.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: bcv:Bcav_1651 lysine exporter protein (LysE/YggA) YP_003407813.1 TIGRFAM: transcriptional regulator, ArgP family; PFAM: regulatory protein LysR; KEGG: kra:Krad_4012 LysR family transcriptional regulator YP_003407814.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: nca:Noca_2219 helix-turn-helix domain- containing protein YP_003407815.1 KEGG: stp:Strop_4461 hypothetical protein YP_003407816.1 KEGG: sco:SCP1.166 putative ATP/GTP-binding protein YP_003407817.1 PFAM: SAF domain protein; KEGG: nca:Noca_2220 SAF domain-containing protein YP_003407818.1 KEGG: sma:SAV_184 hypothetical protein YP_003407819.1 PFAM: type II secretion system protein E; KEGG: stp:Strop_4457 type II secretion system protein E YP_003407820.1 PFAM: Type II secretion system F domain; KEGG: saq:Sare_4969 type II secretion system protein YP_003407821.1 PFAM: Type II secretion system F domain; KEGG: stp:Strop_4455 type II secretion system protein YP_003407823.1 PFAM: TadE family protein; KEGG: sma:SAV_189 hypothetical protein YP_003407824.1 PFAM: TadE family protein; KEGG: sco:SCP1.174 hypothetical protein YP_003407825.1 KEGG: sma:SAV_191 hypothetical protein YP_003407826.1 PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: nca:Noca_2229 peptidoglycan-binding LysM YP_003407827.1 KEGG: sen:SACE_1126 hypothetical protein YP_003407829.1 PFAM: protein of unknown function DUF1526; KEGG: rru:Rru_A1986 hypothetical protein YP_003407830.1 KEGG: nca:Noca_4716 hypothetical protein YP_003407831.1 KEGG: nca:Noca_2238 hypothetical protein YP_003407832.1 KEGG: nca:Noca_4714 hypothetical protein YP_003407833.1 KEGG: nca:Noca_1570 hypothetical protein YP_003407834.1 KEGG: nca:Noca_1571 hypothetical protein YP_003407835.1 KEGG: nca:Noca_2243 ATP-binding protein YP_003407836.1 PFAM: Peptidase M23; KEGG: stp:Strop_4302 peptidase M23B YP_003407837.1 KEGG: nca:Noca_1576 type IV secretory pathway VirD4 components-like YP_003407838.1 KEGG: aau:AAur_pTC10039 hypothetical protein YP_003407839.1 KEGG: nca:Noca_4800 DNA primase catalytic core YP_003407841.1 KEGG: GK21216 gene product from transcript GK21216- RA YP_003407842.1 PFAM: Integrase catalytic region; KEGG: lxx:Lxx22540 transposase, ISlxx5 YP_003407843.1 KEGG: lxx:Lxx14080 hypothetical protein YP_003407844.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase YP_003407845.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: fre:Franean1_5853 glycosyl transferase family protein YP_003407846.1 PFAM: Capsule synthesis protein, CapA; KEGG: stp:Strop_4320 hypothetical protein YP_003407850.1 KEGG: fre:Franean1_2455 tetratricopeptide TPR_4 YP_003407851.1 PFAM: regulatory protein LuxR; Sigma-70 region 4 type 2; response regulator receiver; SMART: regulatory protein LuxR; response regulator receiver; KEGG: tfu:Tfu_0767 LuxR response regulator receiver YP_003407852.1 KEGG: sma:SAV_2410 hypothetical protein YP_003407856.1 PFAM: Collagen triple helix repeat; KEGG: hypothetical protein YP_003407859.1 KEGG: ach:Achl_4013 hypothetical protein YP_003407860.1 KEGG: ace:Acel_0218 putative Lsr2-like protein YP_003407863.1 KEGG: tfu:Tfu_1944 putative secreted protein YP_003407867.1 KEGG: scl:sce7068 hypothetical protein YP_003407868.1 KEGG: art:Arth_1351 hypothetical protein YP_003407869.1 KEGG: mbt:JTY_0035 hypothetical protein YP_003407871.1 KEGG: fra:Francci3_3498 putative Lsr2-like protein YP_003407872.1 KEGG: nfa:nfa20590 putative restriction- modification system endonuclease/methyltransferase YP_003407874.1 KEGG: oan:Oant_0516 hypothetical protein YP_003407877.1 TIGRFAM: death-on-curing family protein; KEGG: fra:Francci3_1091 death-on-curing protein YP_003407879.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fra:Francci3_2849 glucose 1-dehydrogenase YP_003407880.1 KEGG: fre:Franean1_5526 transposase IS4 family protein YP_003407882.1 KEGG: fre:Franean1_1635 hypothetical protein YP_003407886.1 SMART: TIR protein; KEGG: mar:MAE_37310 hypothetical protein YP_003407887.1 PFAM: TrwC relaxase; DNA primase catalytic core domain; TOPRIM domain protein; SMART: Toprim sub domain protein; KEGG: nca:Noca_4800 DNA primase catalytic core YP_003407888.1 KEGG: amr:AM1_A0019 response regulator receiver YP_003407889.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: amr:AM1_A0018 sensor histidine kinase, putative YP_003407891.1 PFAM: sigma-70 region 4 domain protein; KEGG: rfr:Rfer_4430 XRE family transcriptional regulator YP_003407892.1 PFAM: Abortive phage infection; KEGG: stp:Strop_0571 hypothetical protein YP_003407893.1 KEGG: mxa:MXAN_3603 hypothetical protein YP_003407894.1 PFAM: Putative endonuclease, Z1 domain; KEGG: mxa:MXAN_3602 hypothetical protein YP_003407895.1 KEGG: mxa:MXAN_3601 ATPase YP_003407896.1 TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase; iron- sulfur cluster loop; KEGG: stp:Strop_0568 DNA-cytosine methyltransferase YP_003407897.1 KEGG: stp:Strop_0567 hypothetical protein YP_003407898.1 TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr; KEGG: nfa:nfa2330 putative DNA mismatch endonuclease YP_003407900.1 KEGG: scl:sce5216 transposase YP_003407901.1 KEGG: krh:KRH_03510 hypothetical protein YP_003407903.1 PFAM: integrase family protein; KEGG: fre:Franean1_1457 integrase family protein YP_003407905.1 PFAM: histidine kinase A domain protein; ATP- binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase A domain protein; histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein; KEGG: sco:SCO6369 two-component sensor YP_003407906.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sma:SAV_139 two-component system response regulator YP_003407907.1 PFAM: protein of unknown function DUF1458; KEGG: azo:azo1263 hypothetical protein YP_003407908.1 KEGG: sen:SACE_3415 hypothetical protein YP_003407909.1 PFAM: CBS domain containing protein; SMART: CBS domain containing protein; KEGG: nfa:nfa25690 hypothetical protein YP_003407910.1 TIGRFAM: RarD protein, DMT superfamily transporter; PFAM: protein of unknown function DUF6 transmembrane; KEGG: stp:Strop_0394 transporter DMT superfamily protein YP_003407911.1 KEGG: nfa:nfa53000 hypothetical protein YP_003407912.1 KEGG: Hypothetical protein CBG02561 YP_003407913.1 PFAM: ABC transporter related; peptidase S15; alpha/beta hydrolase fold; SMART: AAA ATPase; KEGG: stp:Strop_0256 ABC transporter related YP_003407914.1 KEGG: saq:Sare_0297 hypothetical protein YP_003407915.1 PFAM: Haloacid dehalogenase domain protein hydrolase type 3; KEGG: fre:Franean1_0177 hydrolase YP_003407916.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: saq:Sare_0305 threonine synthase YP_003407917.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ace:Acel_0392 cold-shock DNA-binding protein family protein YP_003407918.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: scl:sce0805 oxidoreductase YP_003407919.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: kra:Krad_3636 chaperonin GroEL YP_003407920.1 TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase; KEGG: rha:RHA1_ro05641 glucose-6-phosphate 1- dehydrogenase YP_003407921.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: ach:Achl_2865 fibronectin type III domain protein YP_003407922.1 PFAM: protein of unknown function DUF72; KEGG: sma:SAV_6567 hypothetical protein YP_003407923.1 KEGG: predicted protein YP_003407924.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mab:MAB_2306c putative oxidoreductase YP_003407925.1 KEGG: lxx:Lxx08030 hypothetical protein YP_003407926.1 KEGG: sgr:SGR_3194 hypothetical protein YP_003407927.1 TIGRFAM: acetylornithine deacetylase or succinyl- diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: kra:Krad_2177 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase YP_003407928.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: sen:SACE_1420 putative MFS dicarboxylate transporter YP_003407930.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sma:SAV_2729 LuxR family transcriptional regulator YP_003407931.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; AAA ATPase; KEGG: kra:Krad_3772 type III restriction protein res subunit YP_003407932.1 PFAM: PilT protein domain protein; KEGG: mbt:JTY_3478 hypothetical protein YP_003407933.1 TIGRFAM: prevent-host-death family protein; KEGG: mva:Mvan_1716 prevent-host-death family protein YP_003407934.1 PFAM: Abortive infection protein; KEGG: art:Arth_3477 abortive infection protein YP_003407935.1 PFAM: Abortive infection protein; KEGG: art:Arth_3477 abortive infection protein YP_003407936.1 KEGG: rhi:NGR_b08140 hypothetical protein YP_003407937.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sen:SACE_4748 protein kinase/LuxR family transcriptional regulator YP_003407938.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: fre:Franean1_0173 helicase domain-containing protein YP_003407939.1 KEGG: sen:SACE_0561 hypothetical protein YP_003407941.1 KEGG: rop:ROP_50270 hypothetical protein YP_003407942.1 PFAM: AMP-dependent synthetase and ligase; KEGG: nfa:nfa41500 AMP-binding domain protein YP_003407943.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: mpa:MAP3240 hypothetical protein YP_003407944.1 KEGG: fal:FRAAL0713 hypothetical protein YP_003407945.1 KEGG: nca:Noca_2928 hypothetical protein YP_003407946.1 PFAM: protein of unknown function DUF202; KEGG: sco:SCO1687 hypothetical protein YP_003407947.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: ace:Acel_0104 cold-shock DNA-binding protein family protein YP_003407948.1 KEGG: fra:Francci3_4420 hypothetical protein YP_003407949.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_0596 hypothetical protein YP_003407950.1 KEGG: sen:SACE_0598 hypothetical protein YP_003407951.1 KEGG: tfu:Tfu_0239 hypothetical protein YP_003407952.1 PFAM: Xanthine/uracil/vitamin C permease; KEGG: kra:Krad_1382 xanthine/uracil/vitamin C permease YP_003407953.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rer:RER_46250 MarR family transcriptional regulator YP_003407954.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: rha:RHA1_ro04974 multidrug ABC transporter YP_003407955.1 KEGG: ace:Acel_0780 hypothetical protein YP_003407956.1 TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX; KEGG: ace:Acel_0111 2'-5' RNA ligase YP_003407957.1 PFAM: Animal haem peroxidase; KEGG: gvi:glr3599 hypothetical protein YP_003407958.1 PFAM: aldo/keto reductase; KEGG: rrs:RoseRS_4538 aldo/keto reductase YP_003407959.1 KEGG: nca:Noca_1148 hypothetical protein YP_003407960.1 KEGG: fre:Franean1_0160 hypothetical protein YP_003407961.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: sen:SACE_0626 putative tRNA/rRNA methyltransferase YP_003407962.1 KEGG: sen:SACE_1044 transmembrane protein YP_003407963.1 KEGG: sco:SCO5855 DNA-binding protein YP_003407964.1 TIGRFAM: phosphoserine aminotransferase; PFAM: aminotransferase class V; KEGG: mva:Mvan_5033 phosphoserine aminotransferase YP_003407965.1 PFAM: Citrate synthase; KEGG: sma:SAV_3859 citrate synthase 2 YP_003407966.1 KEGG: bvi:Bcep1808_2662 pyridoxamine 5'-phosphate oxidase; TIGRFAM: pyridoxamine 5'-phosphate oxidase; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; Pyridoxine 5'-phosphate oxidase, dimerisation- like YP_003407967.1 PFAM: major facilitator superfamily MFS_1; protein of unknown function DUF894 DitE; KEGG: rop:ROP_50560 putative MFS transporter YP_003407968.1 TIGRFAM: peroxiredoxin, Ohr subfamily; PFAM: OsmC family protein; KEGG: ppw:PputW619_1469 OsmC family protein YP_003407969.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: ace:Acel_0118 phage SPO1 DNA polymerase- related protein YP_003407970.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fre:Franean1_0107 ABC transporter related YP_003407971.1 KEGG: rha:RHA1_ro05017 ABC transporter permease YP_003407972.1 PFAM: Tetratricopeptide TPR_2 repeat protein; Tetratricopeptide TPR_4; KEGG: kra:Krad_2758 TPR repeat-containing protein YP_003407973.1 KEGG: sen:SACE_0039 hypothetical protein YP_003407974.1 TIGRFAM: sortase family protein; PFAM: peptidase C60 sortase A and B; KEGG: sen:SACE_0038 putative sortase-like protein YP_003407975.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: cms:CMS_0950 hypothetical protein YP_003407976.1 PFAM: phosphoenolpyruvate carboxylase; KEGG: rha:RHA1_ro07181 phosphoenolpyruvate carboxylase YP_003407977.1 PFAM: inositol monophosphatase; KEGG: bbt:BBta_6561 CysQ protein YP_003407978.1 PFAM: Protein of unknown function DUF2182, transmembrane, metal-binding; KEGG: nca:Noca_4910 hypothetical protein YP_003407979.1 PFAM: protein of unknown function DUF1326; KEGG: nca:Noca_4909 hypothetical protein YP_003407980.1 KEGG: ddr:Deide_12540 putative ferredoxin--NADP(+) reductase (NADPH:adrenodoxin oxidoreductase) YP_003407981.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: mjl:Mjls_2107 antibiotic biosynthesis monooxygenase YP_003407982.1 KEGG: art:Arth_3899 hypothetical protein YP_003407983.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: kra:Krad_3521 DNA-(apurinic or apyrimidinic site) lyase YP_003407984.1 PFAM: DNA photolyase FAD-binding; DNA photolyase domain protein; KEGG: kra:Krad_3554 deoxyribodipyrimidine photo- lyase YP_003407985.1 KEGG: sen:SACE_3941 hypothetical protein YP_003407986.1 KEGG: nfa:nfa28190 hypothetical protein YP_003407987.1 KEGG: sco:SCO0827 hypothetical protein YP_003407988.1 PFAM: alpha/beta hydrolase fold; KEGG: hau:Haur_1044 alpha/beta hydrolase fold YP_003407989.1 PFAM: major facilitator superfamily MFS_1; KEGG: sgr:SGR_4242 putative grixazone transporter YP_003407992.1 PFAM: transcriptional activator domain; NB-ARC domain protein; transcriptional regulator domain protein; KEGG: fal:FRAAL0468 putative ATP/GTP binding protein YP_003407993.1 PFAM: TrwC relaxase; KEGG: nca:Noca_1102 exonuclease V subunit alpha YP_003407994.1 KEGG: nca:Noca_1723 hypothetical protein YP_003407995.1 PFAM: integrase family protein; KEGG: mkm:Mkms_3068 phage integrase family protein YP_003407996.1 PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV_7067 hydrolase YP_003407997.1 PFAM: permease for cytosine/purines uracil thiamine allantoin; KEGG: rer:RER_53030 cytosine permease YP_003407998.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: rer:RER_53040 cytosine deaminase YP_003407999.1 PFAM: Polyketide cyclase/dehydrase; KEGG: sco:SCO6482 hypothetical protein YP_003408000.1 PFAM: Silent information regulator protein Sir2; KEGG: saq:Sare_2516 silent information regulator protein Sir2 YP_003408001.1 KEGG: cms:CMS_2945 hypothetical protein YP_003408002.1 KEGG: kra:Krad_0382 hypothetical protein YP_003408003.1 PFAM: aminoglycoside phosphotransferase; KEGG: sen:SACE_7240 hypothetical protein YP_003408004.1 PFAM: thioesterase superfamily protein; KEGG: rop:ROP_34540 hypothetical protein YP_003408005.1 KEGG: stp:Strop_0692 hypothetical protein YP_003408006.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: tfu:Tfu_0591 hypothetical protein YP_003408007.1 KEGG: cdi:DIP0859 large-conductance mechanosensitive channel YP_003408008.1 TIGRFAM: Flp pilus assembly protein CpaB; PFAM: SAF domain protein; KEGG: nca:Noca_0786 SAF domain-containing protein YP_003408009.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: mjl:Mjls_4670 FmdB family regulatory protein YP_003408010.1 PFAM: protein of unknown function DUF1348; KEGG: mva:Mvan_4732 hypothetical protein YP_003408011.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kra:Krad_0913 MarR family transcriptional regulator YP_003408012.1 PFAM: carboxyl transferase; KEGG: rer:RER_58860 acetyl-CoA carboxylase beta chain YP_003408013.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: rha:RHA1_ro02936 formyl-CoA transferase YP_003408014.1 PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: rop:ROP_26610 putative dicarboxylate carrier protein YP_003408016.1 TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; KEGG: sen:SACE_0773 5-formyltetrahydrofolate cyclo- ligase YP_003408017.1 TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; PFAM: Nucleotidyl transferase; KEGG: sco:SCO3182 UTP-glucose-1-phosphate uridylyltransferase YP_003408018.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: rer:RER_43880 molybdopterin biosynthesis protein MoeA YP_003408019.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL6393 putative ribosomal-protein- alanine N-acetyltransferase YP_003408020.1 KEGG: stp:Strop_0748 hypothetical protein YP_003408021.1 PFAM: PRC-barrel domain protein; KEGG: sgr:SGR_6643 hypothetical protein YP_003408022.1 KEGG: ace:Acel_0612 hypothetical protein YP_003408023.1 TIGRFAM: peptidase S26B, signal peptidase; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ace:Acel_0959 peptidase S26B, signal peptidase YP_003408024.1 KEGG: ace:Acel_0621 hypothetical protein YP_003408025.1 KEGG: ace:Acel_0620 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003408026.1 KEGG: tgr:Tgr7_3263 VcfQ-like protein YP_003408027.1 SMART: Fibronectin type III domain protein; KEGG: mxa:MXAN_0510 putative cell wall surface anchor family protein YP_003408028.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa41970 putative enoyl-CoA hydratase/isomerase family protein YP_003408029.1 PFAM: glycosyl transferase family 39; KEGG: mkm:Mkms_4360 glycosyl transferase family protein YP_003408030.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: sgr:SGR_4347 putative tetrapyrrole methylase YP_003408031.1 KEGG: mpa:MAP2795 hypothetical protein YP_003408032.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: sma:SAV_6264 metal-transport protein YP_003408033.1 PFAM: amino acid permease-associated region; KEGG: sco:SCO6014 cationic amino acid transporter YP_003408034.1 KEGG: ank:AnaeK_3189 hypothetical protein YP_003408035.1 KEGG: tfu:Tfu_0389 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; PFAM: tRNA synthetase class I (M) YP_003408036.1 TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease; KEGG: saq:Sare_0725 TatD family hydrolase YP_003408037.1 KEGG: fal:FRAAL3265 transmembrane efflux protein YP_003408038.1 PFAM: Transglycosylase domain protein; protein of unknown function DUF348; G5 domain protein; KEGG: kra:Krad_1044 transglycosylase domain- containing protein YP_003408039.1 KEGG: tfu:Tfu_0405 dimethyladenosine transferase; TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase- like YP_003408040.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein; KEGG: rer:RER_43520 4-diphosphocytidyl-2-C-methyl-D- erythritol kinase YP_003408041.1 PFAM: regulatory protein TetR; KEGG: stp:Strop_0787 regulatory protein, TetR YP_003408042.1 PFAM: fatty acid desaturase; KEGG: sco:SCO3128 fatty acid desaturase (membrane) YP_003408043.1 KEGG: saq:Sare_0732 UDP-N-acetylglucosamine pyrophosphorylase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_003408044.1 KEGG: saq:Sare_0733 ribose-phosphate pyrophosphokinase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_003408045.1 KEGG: kra:Krad_3900 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP- glucose/GDP-mannose dehydrogenase dimerisation; UDP- glucose/GDP-mannose dehydrogenase YP_003408046.1 TIGRFAM: ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; PFAM: Ribosomal protein L25-like; KEGG: nca:Noca_0911 50S ribosomal protein L25P YP_003408047.1 KEGG: fra:Francci3_3951 peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_003408048.1 KEGG: saq:Sare_0829 transcription-repair coupling factor; TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; helicase domain protein; TRCF domain protein; DEAD/DEAH box helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_003408049.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; Thioesterase; phosphopantetheine-binding; KEGG: cti:RALTA_B0309 putative acetoacetyl-coenzyme A synthetase YP_003408050.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: sma:SAV_3193 phosphopantetheinyl transferase YP_003408051.1 KEGG: ace:Acel_1911 PpiC-type peptidyl-prolyl cis- trans isomerase YP_003408052.1 TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase; KEGG: saq:Sare_0831 nucleoside triphosphate pyrophosphohydrolase YP_003408053.1 KEGG: fra:Francci3_3923 phosphopyruvate hydratase; TIGRFAM: enolase; PFAM: enolase YP_003408054.1 PFAM: Septum formation initiator; KEGG: tfu:Tfu_0429 hypothetical protein YP_003408055.1 PFAM: protein of unknown function DUF501; KEGG: fre:Franean1_0809 hypothetical protein YP_003408056.1 PFAM: Ppx/GppA phosphatase; KEGG: stp:Strop_0894 Ppx/GppA phosphatase YP_003408057.1 KEGG: fra:Francci3_1317 hypothetical protein YP_003408058.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: ace:Acel_1903 uracil-DNA glycosylase superfamily protein YP_003408059.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: stp:Strop_0905 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003408060.1 PFAM: peptidase M28; protease-associated PA domain protein; peptidase M20; KEGG: tfu:Tfu_2403 aminopeptidase Y YP_003408061.1 PFAM: protein of unknown function DUF1112; KEGG: sen:SACE_0895 hypothetical protein YP_003408062.1 KEGG: sma:SAV_3512 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003408063.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sma:SAV_3511 secreted protein YP_003408064.1 PFAM: Protein of unknown function DUF2252; KEGG: mmc:Mmcs_1350 hypothetical protein YP_003408065.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ace:Acel_0804 GCN5-related N- acetyltransferase YP_003408066.1 SMART: von Willebrand factor type A; KEGG: fre:Franean1_0822 von Willebrand factor type A YP_003408067.1 KEGG: fre:Franean1_0823 putative magnesium chelatase YP_003408068.1 TIGRFAM: threonine dehydratase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; amino acid-binding ACT domain protein; KEGG: nca:Noca_0979 threonine dehydratase YP_003408069.1 KEGG: rer:RER_07210 ABC transporter ATP-binding protein; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003408070.1 PFAM: ABC-2 type transporter; KEGG: nca:Noca_1483 ABC-2 type transporter YP_003408071.1 PFAM: peptidase M3A and M3B thimet/oligopeptidase F; KEGG: cmi:CMM_1468 putative peptidyl-dipeptidase YP_003408072.1 KEGG: dge:Dgeo_1350 hypothetical protein YP_003408073.1 TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain protein; KEGG: stp:Strop_0923 transcription elongation factor GreA YP_003408074.1 TIGRFAM: mycothiol conjugate amidase Mca; PFAM: LmbE family protein; KEGG: stp:Strop_0925 LmbE family protein YP_003408075.1 KEGG: mav:MAV_1207 hypothetical protein YP_003408076.1 KEGG: mjl:Mjls_2610 hypothetical protein YP_003408077.1 PFAM: protein of unknown function DUF255; KEGG: sen:SACE_0923 hypothetical protein YP_003408078.1 KEGG: rop:ROP_52070 hypothetical protein YP_003408079.1 KEGG: msm:MSMEG_2246 hypothetical protein YP_003408080.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro01992 dehydrogenase YP_003408081.1 TIGRFAM: channel protein, hemolysin III family; PFAM: Hly-III family protein; KEGG: stp:Strop_0096 hemolysin III family channel protein YP_003408082.1 KEGG: ace:Acel_1881 undecaprenyl pyrophosphate synthetase; TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_003408083.1 KEGG: msm:MSMEG_5250 CalR9 protein YP_003408086.1 PFAM: PhoH family protein; SMART: Nucleotide binding protein PINc; KEGG: sen:SACE_0915 PhoH-like phosphate starvation- induced protein YP_003408087.1 KEGG: rha:RHA1_ro05202 hypothetical protein YP_003408089.1 KEGG: GH10507 gene product from transcript GH10507- RA YP_003408090.1 TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein; KEGG: nca:Noca_0739 flagellar biosynthesis protein FlhA YP_003408091.1 PFAM: type III secretion exporter; KEGG: nca:Noca_0740 type III secretion exporter YP_003408092.1 TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein; KEGG: kra:Krad_1668 flagellar biosynthetic protein FliR YP_003408093.1 PFAM: export protein FliQ family 3; KEGG: ace:Acel_0858 flagellar biosynthetic protein FliQ YP_003408094.1 TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein; KEGG: ace:Acel_0857 flagellar biosynthesis protein FliP YP_003408095.1 KEGG: nca:Noca_0744 hypothetical protein YP_003408096.1 TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; KEGG: nca:Noca_0745 flagellar motor switch protein FliN YP_003408097.1 PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein; KEGG: ace:Acel_0854 flagellar motor switch protein FliM YP_003408098.1 PFAM: flagellar basal body-associated protein FliL; KEGG: kra:Krad_1662 flagellar basal body-associated protein FliL YP_003408099.1 PFAM: OmpA/MotB domain protein; KEGG: ace:Acel_0852 OmpA/MotB domain-containing protein YP_003408100.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: nca:Noca_0749 MotA/TolQ/ExbB proton channel YP_003408101.1 PFAM: flagellar FlbD family protein; KEGG: ace:Acel_0850 flagellar FlbD family protein YP_003408102.1 TIGRFAM: fagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body FlaE domain protein; flagellar basal body rod protein; KEGG: ace:Acel_0849 hypothetical protein YP_003408103.1 PFAM: flagellar hook capping protein; KEGG: nca:Noca_0752 flagellar hook capping protein YP_003408104.1 PFAM: flagellar hook-length control protein; KEGG: kra:Krad_1656 flagellar hook-length control protein YP_003408105.1 PFAM: Lytic transglycosylase catalytic; NLP/P60 protein; Transglycosylase domain protein; KEGG: nca:Noca_0754 lytic transglycosylase, catalytic YP_003408106.1 KEGG: dds:Ddes_0097 ErfK/YbiS/YcfS/YnhG family protein YP_003408107.1 KEGG: ace:Acel_0844 flagellar protein export ATPase FliI; TIGRFAM: flagellar protein export ATPase FliI; ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_003408108.1 PFAM: Flagellar assembly protein FliH/Type III secretion system HrpE; KEGG: ace:Acel_0843 flagellar biosynthesis/type III secretory pathway protein-like YP_003408109.1 TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG; KEGG: ace:Acel_0842 flagellar motor switch protein FliG YP_003408110.1 TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein; KEGG: nca:Noca_0759 flagellar M-ring protein FliF YP_003408111.1 TIGRFAM: flagellar hook-basal body complex subunit FliE; PFAM: flagellar hook-basal body complex protein FliE; KEGG: kra:Krad_1649 flagellar hook-basal body complex subunit FliE YP_003408112.1 PFAM: protein of unknown function DUF1078 domain protein; KEGG: kra:Krad_1648 hypothetical protein YP_003408113.1 TIGRFAM: flagellar basal-body rod protein FlgB; KEGG: kra:Krad_1647 flagellar basal-body rod protein FlgB YP_003408114.1 KEGG: kra:Krad_1629 hypothetical protein YP_003408115.1 TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS; KEGG: ace:Acel_0836 flagellar protein FliS YP_003408116.1 PFAM: flagellar hook-associated 2 domain protein; flagellin hook IN repeat protein; flagellar hook- associated protein 2 domain protein; KEGG: nca:Noca_0765 flagellar hook-associated 2 domain-containing protein YP_003408117.1 PFAM: flagellin domain protein; KEGG: hor:Hore_17080 flagellin domain protein YP_003408118.1 KEGG: gsu:GSU3023 glycosyl transferase, group 1/2 family protein YP_003408119.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein; KEGG: ace:Acel_2032 RNA polymerase, sigma 28 subunit YP_003408120.1 PFAM: FlgN family protein; KEGG: ace:Acel_0833 hypothetical protein YP_003408121.1 TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein; KEGG: ace:Acel_0832 flagellar hook-associated protein FlgK YP_003408122.1 TIGRFAM: flagellar hook-associated protein 3; PFAM: flagellin domain protein; KEGG: nca:Noca_0770 flagellar hook-associated protein 3 YP_003408123.1 PFAM: protein of unknown function DUF180; KEGG: nca:Noca_0771 hypothetical protein YP_003408124.1 TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator; KEGG: kra:Krad_1677 carbon storage regulator, CsrA YP_003408125.1 KEGG: rru:Rru_A2343 hypothetical protein YP_003408126.1 KEGG: ace:Acel_2032 RNA polymerase, sigma 28 subunit YP_003408128.1 KEGG: mem:Memar_1293 peptidase U32 YP_003408129.1 PFAM: NLP/P60 protein; peptidase M15B and M15C DD- carboxypeptidase VanY/endolysin; KEGG: ace:Acel_0587 peptidase M15B and M15C, D,D- carboxypeptidase VanY/endolysins YP_003408131.1 KEGG: sen:SACE_0649 citrate synthase; TIGRFAM: citrate synthase I; PFAM: Citrate synthase YP_003408132.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: fal:FRAAL6152 fumarate hydratase YP_003408133.1 KEGG: hypothetical protein YP_003408134.1 PFAM: protein of unknown function DUF1707; KEGG: fal:FRAAL2404 hypothetical protein YP_003408135.1 KEGG: rer:RER_42390 fructose 1,6-bisphosphatase class II; TIGRFAM: fructose-1,6-bisphosphatase, class II; PFAM: GlpX family protein YP_003408136.1 KEGG: stp:Strop_0876 hypothetical protein YP_003408137.1 PFAM: Exonuclease VII small subunit; KEGG: sgr:SGR_2475 exodeoxyribonuclease VII small subunit YP_003408138.1 KEGG: stp:Strop_0878 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_003408139.1 KEGG: cmi:CMM_0897 hypothetical protein YP_003408140.1 KEGG: rop:ROP_59320 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein YP_003408141.1 KEGG: ace:Acel_1859 hypothetical protein YP_003408142.1 PFAM: protein of unknown function DUF195; KEGG: stp:Strop_0882 hypothetical protein YP_003408143.1 TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: nfa:nfa47910 putative methylated-DNA:protein- cysteine methyltransferase YP_003408144.1 PFAM: Ada metal-binding domain protein; AlkA domain protein; HhH-GPD family protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; HhH-GPD family protein; KEGG: stp:Strop_3783 alcohol dehydrogenase YP_003408145.1 KEGG: nfa:nfa14560 hypothetical protein YP_003408146.1 PFAM: UspA domain protein; KEGG: sen:SACE_7258 UspA domain-containing protein YP_003408147.1 PFAM: regulatory protein TetR; KEGG: bcv:Bcav_1090 transcriptional regulator, TetR family YP_003408149.1 PFAM: isochorismatase hydrolase; KEGG: mlo:mlr4509 hypothetical protein YP_003408150.1 PFAM: LmbE family protein; KEGG: kra:Krad_3426 LmbE family protein YP_003408151.1 PFAM: glycosyl transferase group 1; KEGG: mch:Mchl_2912 glycosyl transferase group 1 YP_003408152.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: met:M446_2286 xylose isomerase domain- containing protein YP_003408153.1 PFAM: protein of unknown function DUF181; KEGG: kra:Krad_3428 hypothetical protein YP_003408154.1 KEGG: kra:Krad_3429 hypothetical protein YP_003408155.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: mrd:Mrad2831_3595 oxidoreductase domain- containing protein YP_003408156.1 KEGG: mch:Mchl_2908 methyltransferase type 11 YP_003408157.1 KEGG: met:M446_2290 hypothetical protein YP_003408158.1 PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: mch:Mchl_2906 inositol-3-phosphate synthase YP_003408159.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_0672 ABC transporter-related protein YP_003408160.1 PFAM: ABC-2 type transporter; KEGG: kra:Krad_0671 ABC-2 type transporter YP_003408161.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: cms:CMS_0993 putative two-component system sensor kinase YP_003408162.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sgr:SGR_204 putative two-component system response regulator YP_003408163.1 PFAM: GCN5-related N-acetyltransferase; KEGG: jan:Jann_1855 acetyltransferase YP_003408164.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: aau:AAur_3146 cupin domain-containing protein YP_003408165.1 TIGRFAM: GTP-binding protein YchF; PFAM: Protein of unknown function DUF933; GTP- binding protein HSR1-related; KEGG: saq:Sare_4160 GTP-dependent nucleic acid- binding protein EngD YP_003408166.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: krh:KRH_21580 putative oxidoreductase YP_003408167.1 KEGG: mpa:MAP2535 hypothetical protein YP_003408168.1 KEGG: rha:RHA1_ro00231 hypothetical protein YP_003408169.1 PFAM: ribonuclease BN; KEGG: sen:SACE_1794 ribonuclease BN YP_003408170.1 PFAM: alpha/beta hydrolase fold; KEGG: azc:AZC_4505 putative hydrolase YP_003408171.1 PFAM: FAD dependent oxidoreductase; KEGG: bur:Bcep18194_C6776 flavin-containing monooxygenase FMO YP_003408172.1 KEGG: lxx:Lxx01060 protoporphyrinogen oxidase YP_003408173.1 KEGG: rop:ROP_01720 hypothetical protein YP_003408174.1 KEGG: cak:Caul_0033 translation initiation factor IF-2 YP_003408175.1 PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase; KEGG: art:Arth_3967 cyclase/dehydrase YP_003408176.1 PFAM: Patatin; KEGG: fal:FRAAL1315 hypothetical protein YP_003408177.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ddr:Deide_2p02100 putative NADPH:quinone reductase (quinone oxidoreductase) YP_003408178.1 KEGG: afw:Anae109_3553 hypothetical protein YP_003408179.1 PFAM: aldo/keto reductase; KEGG: kra:Krad_1519 aryl-alcohol dehydrogenase (NADP(+)) YP_003408180.1 PFAM: PspC domain protein; KEGG: cag:Cagg_0912 phage shock protein C, PspC YP_003408181.1 KEGG: saq:Sare_4415 hypothetical protein YP_003408182.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tfu:Tfu_2451 succinate dehydrogenase/fumarate reductase iron-sulfur subunit YP_003408183.1 TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunit; PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: tfu:Tfu_2452 succinate dehydrogenase flavoprotein subunit YP_003408184.1 TIGRFAM: succinate dehydrogenase (or fumarate reductase) cytochrome b subunit, b558 family; KEGG: sma:SAV_7307 cytochrome b subunit YP_003408185.1 PFAM: oxidoreductase molybdopterin binding; KEGG: cmi:CMM_1423 putative sulfite oxidase YP_003408186.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: cms:CMS_1519 putative oxidoreductase YP_003408187.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: saq:Sare_4225 peptidase M1 membrane alanine aminopeptidase YP_003408188.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO4496 acetyltransferase YP_003408189.1 KEGG: kra:Krad_3222 hypothetical protein YP_003408191.1 PFAM: formate/nitrite transporter; KEGG: mgi:Mflv_1015 formate/nitrate transporter YP_003408192.1 KEGG: bcj:BCAS0604 hypothetical protein YP_003408193.1 PFAM: Domain of unknown function DUF1990; KEGG: mva:Mvan_2554 hypothetical protein YP_003408194.1 KEGG: sgr:SGR_6214 hypothetical protein YP_003408195.1 KEGG: sco:SCO1348 hypothetical protein YP_003408196.1 KEGG: fal:FRAAL4556 hypothetical protein YP_003408197.1 PFAM: protein of unknown function DUF839; KEGG: stp:Strop_4049 hypothetical protein YP_003408198.1 PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: vap:Vapar_3549 transcriptional regulator, LuxR family YP_003408199.1 PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; KEGG: sen:SACE_7324 phosphoenolpyruvate synthase YP_003408200.1 PFAM: Methyltransferase type 11; O- methyltransferase family 2; Methyltransferase type 12; KEGG: min:Minf_1110 SAM-dependent methyltransferase YP_003408201.1 PFAM: transcriptional coactivator/pterin dehydratase; KEGG: saq:Sare_4055 transcriptional coactivator/pterin dehydratase YP_003408202.1 TIGRFAM: adenylylsulfate reductase, thioredoxin dependent; phosphoadenosine phosphosulfate reductase; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: sco:SCO6100 phosphoadenosine phosphosulfate reductase YP_003408203.1 KEGG: sma:SAV_2128 hypothetical protein YP_003408204.1 PFAM: nitrite and sulphite reductase 4Fe-4S region; nitrite/sulfite reductase hemoprotein beta-component ferrodoxin domain protein; KEGG: tfu:Tfu_1888 putative nitrite/sulphite reductase YP_003408205.1 KEGG: tfu:Tfu_0425 adenylylsulfate kinase; TIGRFAM: adenylylsulfate kinase; PFAM: adenylylsulfate kinase YP_003408206.1 TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074; KEGG: rer:RER_03370 Rrf2 family DNA-binding protein YP_003408207.1 PFAM: NUDIX hydrolase; KEGG: fre:Franean1_0863 NUDIX hydrolase YP_003408208.1 PFAM: CsbD family protein; KEGG: mjl:Mjls_5089 CsbD family protein YP_003408209.1 PFAM: extracellular solute-binding protein family 5; KEGG: mab:MAB_0426 peptide ABC transporter DppA YP_003408210.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0427 peptide ABC transporter transmembrane protein YP_003408211.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mab:MAB_0428 peptide ABC transporter DppC YP_003408212.1 KEGG: sgr:SGR_2415 putative peptide ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003408213.1 KEGG: saq:Sare_4209 oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter domain protein; SMART: AAA ATPase YP_003408214.1 TIGRFAM:1D-myo-inosityl-2-acetamido-2-deoxy-alpha- D- glucopyranosidedeacetylase; PFAM: LmbE family protein; KEGG: ace:Acel_1868 LmbE family protein YP_003408215.1 KEGG: sen:SACE_1009 hypothetical protein YP_003408216.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kra:Krad_1137 GCN5-related N- acetyltransferase YP_003408217.1 PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: tfu:Tfu_0491 ferredoxin YP_003408218.1 TIGRFAM: succinyldiaminopimelate transaminase; PFAM: aminotransferase class I and II; KEGG: fra:Francci3_3857 N-succinyldiaminopimelate aminotransferase YP_003408219.1 PFAM: gamma-glutamyltranspeptidase; KEGG: sen:SACE_0096 putative gamma-glutamyl transferase YP_003408220.1 KEGG: bcv:Bcav_1131 hypothetical protein YP_003408221.1 PFAM: alpha/beta hydrolase fold; KEGG: dge:Dgeo_0803 alpha/beta hydrolase fold YP_003408222.1 TIGRFAM:2,3,4,5-tetrahydropyridine-2, 6-dicarboxylate N-succinyltransferase; PFAM: transferase hexapeptide repeat containing protein; KEGG: sen:SACE_1013 2,3,4,5-tetrahydropyridine-2,6- dicarboxylate N-succinyltransferase YP_003408223.1 TIGRFAM: succinyl-diaminopimelate desuccinylase; PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: fre:Franean1_0874 succinyl-diaminopimelate desuccinylase YP_003408224.1 PFAM: conserved hypothetical protein; KEGG: fra:Francci3_3841 hypothetical protein YP_003408225.1 TIGRFAM: DivIVA domain; KEGG: rha:RHA1_ro05970 hypothetical protein YP_003408226.1 PFAM: Polyketide cyclase/dehydrase; KEGG: stp:Strop_0704 hypothetical protein YP_003408228.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: mlu:Mlut_21060 predicted membrane protein YP_003408229.1 PFAM: Protein of unknown function DUF2243, membrane; KEGG: kra:Krad_3085 hypothetical protein YP_003408230.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: ank:AnaeK_1673 protein of unknown function DUF6 transmembrane YP_003408231.1 PFAM: Fibronectin type III domain protein; SMART: Fibronectin type III domain protein; KEGG: nmr:Nmar_1073 fibronectin type III domain- containing protein YP_003408232.1 KEGG: sen:SACE_1027 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase YP_003408233.1 KEGG: mlb:MLBr_01067 hypothetical protein YP_003408234.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sen:SACE_1030 leucine aminopeptidase YP_003408235.1 KEGG: cag:Cagg_2661 hypothetical protein YP_003408236.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sgr:SGR_2259 GntR family transcriptional regulator YP_003408237.1 KEGG: sgr:SGR_2260 hypothetical protein YP_003408238.1 TIGRFAM: phytoene desaturase; PFAM: FAD dependent oxidoreductase; amine oxidase; KEGG: kra:Krad_3225 zeta-phytoene desaturase YP_003408239.1 KEGG: sgr:SGR_1774 hypothetical protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein YP_003408240.1 PFAM: Radical SAM domain protein; KEGG: sco:SCO7402 lyase YP_003408241.1 TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: ach:Achl_2862 signal peptidase I YP_003408242.1 KEGG: fre:Franean1_5744 hypothetical protein YP_003408243.1 PFAM: multicopper oxidase type 2; multicopper oxidase type 3; multicopper oxidase type 1; Twin-arginine translocation pathway, signal sequence, subgroup; KEGG: ach:Achl_2863 bilirubin oxidase YP_003408244.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: nca:Noca_2634 ATPase domain-containing protein YP_003408245.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: tth:TTC0668 two-component response regulator YP_003408246.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sco:SCO3226 two component system response regulator YP_003408247.1 KEGG: kra:Krad_4493 hypothetical protein YP_003408248.1 KEGG: cef:CE1943 hypothetical protein YP_003408249.1 TIGRFAM: glycogen synthase; PFAM: glycosyl transferase group 1; KEGG: kra:Krad_2900 glycogen synthase YP_003408250.1 TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; KEGG: rer:RER_41600 glucose-1-phosphate adenylyltransferase YP_003408251.1 KEGG: met:M446_4604 hypothetical protein YP_003408252.1 PFAM: O-methyltransferase family 3; KEGG: nfa:nfa47280 putative O-methyltransferase YP_003408253.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: sma:SAV_3117 RNA polymerase sigma factor SigE YP_003408254.1 KEGG: sen:SACE_1036 hypothetical protein YP_003408255.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein; KEGG: sen:SACE_1034 possinble serine protease YP_003408256.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: fre:Franean1_0887 sec-independent translocase YP_003408257.1 PFAM: ATPase-like, ParA/MinD; protein of unknown function DUF59; KEGG: stp:Strop_0715 hypothetical protein YP_003408258.1 PFAM: AzlC family protein; KEGG: nca:Noca_3162 AzlC family protein YP_003408259.1 PFAM: branched-chain amino acid transport; KEGG: nca:Noca_3163 branched-chain amino acid transport YP_003408261.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: rop:ROP_17340 putative MerR family transcriptional regulator YP_003408262.1 KEGG: rop:ROP_15160 hypothetical protein YP_003408263.1 PFAM: protein of unknown function DUF1003; KEGG: rop:ROP_60440 hypothetical membrane protein YP_003408264.1 PFAM: MgtE intracellular region; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: fal:FRAAL6070 magnesium transporter YP_003408265.1 TIGRFAM: phenazine biosynthesis protein PhzF family; PFAM: Phenazine biosynthesis PhzC/PhzF protein; KEGG: saq:Sare_0665 PhzF family phenazine biosynthesis protein YP_003408266.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: saq:Sare_0667 hypothetical protein YP_003408267.1 PFAM: HpcH/HpaI aldolase; KEGG: sgr:SGR_1172 putative lyase YP_003408268.1 KEGG: rer:RER_58340 hypothetical protein YP_003408269.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: mjl:Mjls_1740 acyl-CoA dehydrogenase domain- containing protein YP_003408270.1 KEGG: fre:Franean1_5292 putative secreted protein YP_003408271.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: fal:FRAAL1683 putative zinc-binding oxidoreductase YP_003408272.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rha:RHA1_ro10185 ethyl tert-butyl ether degradation protein YP_003408273.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: mav:MAV_0648 hypothetical protein YP_003408274.1 KEGG: dge:Dgeo_1940 hypothetical protein YP_003408275.1 PFAM: OsmC family protein; KEGG: kra:Krad_3648 OsmC family protein YP_003408277.1 TIGRFAM: patatin-related protein; PFAM: Patatin; KEGG: fre:Franean1_2668 hypothetical protein YP_003408278.1 KEGG: cef:CE0579 hypothetical protein YP_003408281.1 PFAM: Resolvase domain; Recombinase; KEGG: mkm:Mkms_3591 recombinase YP_003408283.1 KEGG: chl:Chy400_3111 hypothetical protein YP_003408284.1 KEGG: chl:Chy400_1045 hypothetical protein YP_003408285.1 KEGG: reu:Reut_A2013 hypothetical protein YP_003408286.1 KEGG: chl:Chy400_3111 hypothetical protein YP_003408287.1 PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; KEGG: mac:MA2525 WD-40 repeat-containing protein YP_003408288.1 PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin; KEGG: fal:FRAAL2125 hypothetical protein YP_003408289.1 KEGG: kra:Krad_3292 hypothetical protein YP_003408290.1 KEGG: mxa:MXAN_2141 EndA/NucM family protease / nuclease YP_003408291.1 KEGG: fal:FRAAL0468 putative ATP/GTP binding protein YP_003408292.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: mkm:Mkms_2746 pyridoxal-dependent decarboxylase YP_003408293.1 KEGG: reh:H16_A3217 hypothetical protein YP_003408295.1 KEGG: avn:Avin_33510 transcriptional regulator YP_003408296.1 TIGRFAM: esterase, PHB depolymerase family; PFAM: Esterase PHB depolymerase; phospholipase/Carboxylesterase; KEGG: met:M446_5706 PHB depolymerase family esterase YP_003408299.1 KEGG: swi:Swit_0276 hypothetical protein YP_003408301.1 KEGG: bcv:Bcav_1647 iron-regulated LSR2 protein precursor YP_003408302.1 PFAM: protein of unknown function DUF1486; KEGG: swi:Swit_4153 hypothetical protein YP_003408303.1 KEGG: rha:RHA1_ro10031 transposase YP_003408305.1 PFAM: peptidase M28; protease-associated PA domain protein; peptidase M20; KEGG: psa:PST_2956 aminopeptidase YP_003408307.1 KEGG: sma:SAV_501 nuclease YP_003408308.1 KEGG: rop:ROP_19820 hypothetical protein YP_003408309.1 PFAM: peptidase M4 thermolysin; Peptidase M4 thermolysin; KEGG: npu:Npun_F5602 peptidase M4, thermolysin YP_003408311.1 PFAM: peptidase M28; KEGG: sen:SACE_5007 hypothetical protein YP_003408315.1 KEGG: ccr:CC_0554 hypothetical protein YP_003408316.1 PFAM: transposase IS4 family protein; KEGG: mac:MA2835 transposase YP_003408317.1 KEGG: pfo:Pfl01_2084 hypothetical protein YP_003408319.1 KEGG: mba:Mbar_A2759 hypothetical protein YP_003408320.1 KEGG: rba:RB4283 hypothetical protein YP_003408322.1 PFAM: transposase IS3/IS911 family protein; KEGG: mbt:JTY_2827 putative transposase YP_003408323.1 PFAM: Integrase catalytic region; KEGG: mtb:TBMG_03676 transposase YP_003408324.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO7812 insertion element transposase YP_003408325.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: gbm:Gbem_1827 alpha amylase catalytic region YP_003408326.1 PFAM: Protein of unknown function DUF2235; KEGG: hch:HCH_00503 hypothetical protein YP_003408327.1 KEGG: fre:Franean1_2455 tetratricopeptide TPR_4 YP_003408328.1 PFAM: Type II secretion system F domain; KEGG: fre:Franean1_5825 type II secretion system protein YP_003408329.1 PFAM: Type II secretion system F domain; KEGG: fal:FRAAL1321 hypothetical protein YP_003408330.1 KEGG: fre:Franean1_5823 hypothetical protein YP_003408331.1 PFAM: TadE family protein; KEGG: fre:Franean1_5822 TadE family protein YP_003408332.1 KEGG: fra:Francci3_0784 hypothetical protein YP_003408333.1 KEGG: aau:AAur_2664 putative type II/IV secretion system protein YP_003408334.1 PFAM: Integrase catalytic region; KEGG: mtc:MT3100 IS6110, transposase YP_003408335.1 PFAM: transposase IS3/IS911 family protein; KEGG: kra:Krad_2846 transposase IS3/IS911 family protein YP_003408336.1 KEGG: mjl:Mjls_2154 transposase IS3/IS911 family protein YP_003408337.1 PFAM: Animal haem peroxidase; KEGG: mva:Mvan_3099 prostaglandin-endoperoxide synthase YP_003408338.1 KEGG: dra:DR_A0146 hypothetical protein YP_003408340.1 PFAM: transcriptional activator domain; KEGG: rca:Rcas_0060 transcriptional activator domain-containing protein YP_003408341.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: ace:Acel_1410 ECF subfamily RNA polymerase sigma-24 factor YP_003408342.1 KEGG: msm:MSMEG_1386 hypothetical protein YP_003408343.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: ach:Achl_0876 hypothetical protein YP_003408346.1 PFAM: Patatin; KEGG: mva:Mvan_1130 patatin YP_003408347.1 PFAM: CutA1 divalent ion tolerance protein; KEGG: nfa:nfa51950 hypothetical protein YP_003408348.1 KEGG: mrd:Mrad2831_4259 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003408349.1 KEGG: sen:SACE_2936 hypothetical protein YP_003408350.1 TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: sco:SCO2972 peptide chain release factor 2 YP_003408351.1 KEGG: sen:SACE_1106 cell division ATP-binding protein; TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; SMART: AAA ATPase YP_003408352.1 PFAM: protein of unknown function DUF214; KEGG: sen:SACE_1107 putative cell division membrane protein YP_003408353.1 TIGRFAM: SsrA-binding protein; PFAM: SmpB protein; KEGG: fra:Francci3_0801 SsrA-binding protein YP_003408354.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sen:SACE_5172 alcohol dehydrogenase YP_003408355.1 PFAM: amidohydrolase 2; KEGG: sco:SCO4016 hypothetical protein YP_003408356.1 PFAM: monooxygenase FAD-binding; KEGG: gvi:gll1952 hypothetical protein YP_003408357.1 PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_6586 alpha/beta hydrolase, putative YP_003408358.1 KEGG: sen:SACE_4612 hypothetical protein YP_003408359.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bcv:Bcav_1925 GCN5-related protein N- acetyltransferase YP_003408360.1 KEGG: sgr:SGR_6862 hypothetical protein YP_003408361.1 KEGG: sgr:SGR_983 hypothetical protein YP_003408362.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: sen:SACE_5050 carboxymuconolactone decarboxylase YP_003408363.1 PFAM: protein of unknown function UPF0157; KEGG: cmi:CMM_0656 hypothetical protein YP_003408364.1 TIGRFAM: magnesium and cobalt transport protein CorA; PFAM: Mg2 transporter protein CorA family protein; KEGG: kra:Krad_3987 magnesium and cobalt transport protein CorA YP_003408365.1 PFAM: Dicarboxylate carrier MatC domain protein; Citrate transporter; KEGG: sco:SCO2443 carrier protein membrane protein YP_003408366.1 PFAM: Asp/Glu/hydantoin racemase; KEGG: reu:Reut_B5483 Asp/Glu racemase YP_003408367.1 KEGG: sen:SACE_0842 hypothetical protein YP_003408368.1 KEGG: kra:Krad_2009 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein YP_003408370.1 PFAM: TrkA-N domain protein; Ion transport 2 domain protein; KEGG: sma:SAV_4367 hypothetical protein YP_003408371.1 PFAM: Patatin; KEGG: fre:Franean1_0999 patatin YP_003408372.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: fal:FRAAL3448 glycerophosphoryl diester phosphodiesteraseglycerophosphoryl diester phosphodiesterase YP_003408373.1 KEGG: fal:FRAAL0468 putative ATP/GTP binding protein YP_003408374.1 PFAM: DSBA oxidoreductase; KEGG: scl:sce1376 DSBA oxidoreductase YP_003408375.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kra:Krad_2941 MarR family transcriptional regulator YP_003408376.1 PFAM: YceI family protein; KEGG: ace:Acel_0530 YceI family protein YP_003408377.1 PFAM: monooxygenase FAD-binding; KEGG: sen:SACE_1728 monooxygenase, FAD-binding YP_003408378.1 KEGG: krh:KRH_05810 hypothetical protein YP_003408380.1 TIGRFAM: GTP-binding protein TypA; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; KEGG: fra:Francci3_3865 GTP-binding protein TypA YP_003408381.1 PFAM: Aldose 1-epimerase; KEGG: kra:Krad_0621 aldose 1-epimerase YP_003408382.1 KEGG: mpa:MAP0102 hypothetical protein YP_003408383.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; KEGG: sma:SAV_5993 reductase YP_003408384.1 PFAM: protein of unknown function DUF81; KEGG: tfu:Tfu_1694 hypothetical protein YP_003408385.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sma:SAV_898 ECF subfamily RNA polymerase sigma factor YP_003408386.1 KEGG: sen:SACE_2116 integral membrane protein YP_003408387.1 PFAM: copper resistance protein CopC; copper resistance D domain protein; KEGG: fra:Francci3_4174 copper resistance protein CopC YP_003408388.1 PFAM: nuclear export factor GLE1; KEGG: fre:Franean1_7242 nuclear export factor GLE1 YP_003408389.1 PFAM: electron transport protein SCO1/SenC; KEGG: fal:FRAAL1595 putative Sco1/SenC family protein; putative signal peptide YP_003408390.1 KEGG: fre:Franean1_7244 hypothetical protein YP_003408391.1 KEGG: kra:Krad_1575 UDP-N-acetylglucosamine pyrophosphorylase related protein YP_003408392.1 PFAM: CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase; KEGG: kra:Krad_3986 CDP- glycerol:poly(glycerophosphate) glycerophosphotransferase YP_003408393.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mav:MAV_1053 hypothetical protein YP_003408394.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: kra:Krad_4205 mannitol dehydrogenase domain- containing protein YP_003408395.1 PFAM: Peptidase M23; KEGG: rha:RHA1_ro05571 lipoprotein YP_003408397.1 PFAM: pentapeptide repeat protein; KEGG: dra:DR_2633 OxrA-related protein YP_003408398.1 KEGG: bra:BRADO5212 putative cyclase YP_003408399.1 PFAM: Endoribonuclease L-PSP; KEGG: mlo:mlr8316 hypothetical protein YP_003408400.1 PFAM: helix-turn-helix HxlR type; KEGG: pla:Plav_2404 HxlR family transcriptional regulator YP_003408402.1 KEGG: mgi:Mflv_1359 muconolactone delta-isomerase; TIGRFAM: muconolactone delta-isomerase; PFAM: Muconolactone delta-isomerase YP_003408403.1 TIGRFAM: catechol 1,2-dioxygenase; PFAM: intradiol ring-cleavage dioxygenase; Catechol dioxygenase domain protein; KEGG: art:Arth_1933 catechol 1,2-dioxygenase YP_003408404.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: sen:SACE_4381 mandelate racemase/muconate lactonizing enzyme-like protein YP_003408405.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sen:SACE_4380 LysR family transcriptional regulator YP_003408406.1 TIGRFAM: benzoate 1,2-dioxygenase, large subunit; PFAM: Rieske [2Fe-2S] iron-sulphur domain; Aromatic- ring-hydroxylating dioxygenase, alpha subunit-like; KEGG: sen:SACE_4379 benzoate 1,2-dioxygenase alpha subunit YP_003408407.1 KEGG: msm:MSMEG_1907 toluate 1,2-dioxygenase beta subunit; TIGRFAM: benzoate 1,2-dioxygenase, small subunit; PFAM: aromatic-ring-hydroxylating dioxygenase beta subunit YP_003408408.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; ferredoxin; KR domain protein; FAD-binding 9 siderophore- interacting domain protein; GntR domain protein; short- chain dehydrogenase/reductase SDR; KEGG: sen:SACE_4377 oxidoreductase FAD-binding region YP_003408409.1 PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: rha:RHA1_ro02391 transcriptional regulator YP_003408410.1 KEGG: rer:RER_48870 hypothetical protein YP_003408411.1 KEGG: fal:FRAAL5693 hypothetical protein YP_003408412.1 PFAM: Collagen triple helix repeat; KEGG: hypothetical protein YP_003408413.1 PFAM: GPR1/FUN34/yaaH family protein; KEGG: pth:PTH_2591 hypothetical protein YP_003408414.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: kra:Krad_0122 stage II sporulation E family protein YP_003408417.1 KEGG: bch:Bcen2424_1977 heat domain-containing protein YP_003408418.1 PFAM: ANTAR domain protein; KEGG: kra:Krad_2459 response regulator receiver/ANTAR domain-containing protein YP_003408420.1 PFAM: Bile acid:sodium symporter; KEGG: kra:Krad_0419 bile acid:sodium symporter YP_003408422.1 PFAM: flagellar FlbD family protein; KEGG: ace:Acel_0850 flagellar FlbD family protein YP_003408423.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: ote:Oter_4275 methyltransferase type 11 YP_003408424.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: cef:CE0278 sensory transduction protein YP_003408425.1 KEGG: bcv:Bcav_0339 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_003408426.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: pde:Pden_5113 response regulator receiver protein YP_003408427.1 KEGG: kra:Krad_0808 hypothetical protein YP_003408428.1 PFAM: protein of unknown function DUF1469; KEGG: aau:AAur_0123 putative protein of unknown function (DUF1469) YP_003408429.1 KEGG: cms:CMS_1037 hypothetical protein YP_003408430.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: sgr:SGR_5888 putative siderophore-interacting protein YP_003408431.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: kra:Krad_0944 protein of unknown function zinc metallopeptidase putative YP_003408432.1 PFAM: formate/nitrite transporter; KEGG: kra:Krad_1605 formate/nitrite transporter YP_003408433.1 KEGG: rsa:RSal33209_1942 hypothetical protein YP_003408434.1 PFAM: glutathionylspermidine synthase; KEGG: nfa:nfa41710 hypothetical protein YP_003408435.1 KEGG: sco:SCO0775 hypothetical protein YP_003408436.1 KEGG: mlo:mll8055 hypothetical protein YP_003408437.1 KEGG: kra:Krad_4328 hypothetical protein YP_003408438.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: swi:Swit_2003 short-chain dehydrogenase/reductase SDR YP_003408439.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: ace:Acel_0489 methyltransferase type 12 YP_003408441.1 KEGG: swp:swp_2875 hypothetical protein YP_003408442.1 PFAM: phosphoribosyltransferase; KEGG: tfu:Tfu_1746 hypothetical protein YP_003408444.1 KEGG: cms:CMS_0245 hypothetical protein YP_003408445.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6512 ABC transporter ATP-binding protein YP_003408446.1 KEGG: sco:SCO1460 hypothetical protein YP_003408447.1 PFAM: aldo/keto reductase; KEGG: vap:Vapar_6037 aldo/keto reductase YP_003408448.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO2254 transmembrane efflux protein YP_003408449.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sgr:SGR_6670 putative dehydrogenase YP_003408450.1 PFAM: Peptidase M23; KEGG: rha:RHA1_ro01366 M24/M37 family peptidase YP_003408451.1 TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: sco:SCO6751 efflux protein YP_003408452.1 PFAM: Cytochrome c oxidase caa3-type, assembly factor CtaG-related; KEGG: sco:SCO1215 integral membrane protein YP_003408453.1 TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase; KEGG: nfa:nfa21890 putative phosphoesterase YP_003408454.1 PFAM: major facilitator superfamily MFS_1; KEGG: msm:MSMEG_2380 sugar transporter family protein YP_003408455.1 PFAM: Methyltransferase type 11; KEGG: ank:AnaeK_1716 methyltransferase type 11 YP_003408456.1 KEGG: mva:Mvan_2082 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_003408457.1 KEGG: rer:RER_23580 phosphoserine phosphatase; TIGRFAM: phosphoserine phosphatase SerB; HAD- superfamily hydrolase, subfamily IB (PSPase-like); PFAM: Haloacid dehalogenase domain protein hydrolase; sucrose-6F-phosphate phosphohydrolase; Haloacid dehalogenase domain protein hydrolase type 3 YP_003408458.1 PFAM: isochorismatase hydrolase; KEGG: tfu:Tfu_2374 putative pyrazinamidase / nicotinamidase YP_003408459.1 TIGRFAM: nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like; KEGG: kra:Krad_3767 putative nicotinate phosphoribosyltransferase YP_003408460.1 PFAM: ATP-dependent Clp protease adaptor protein ClpS; KEGG: mgi:Mflv_2349 ATP-dependent Clp protease adaptor protein ClpS YP_003408461.1 PFAM: Domain of unknown function DUF2017; KEGG: saq:Sare_0988 hypothetical protein YP_003408462.1 PFAM: Mov34/MPN/PAD-1 family protein; SMART: Mov34/MPN/PAD-1 family protein; KEGG: ace:Acel_1689 Mov34/MPN/PAD-1 family protein YP_003408463.1 PFAM: thiamineS protein; KEGG: saq:Sare_0990 thiamineS protein YP_003408464.1 TIGRFAM: cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: fre:Franean1_5652 cysteine synthase YP_003408465.1 PFAM: beta-lactamase domain protein; KEGG: sco:SCO2908 hypothetical protein YP_003408466.1 PFAM: DNA primase small subunit; KEGG: saq:Sare_4039 DNA polymerase LigD polymerase subunit YP_003408467.1 KEGG: fal:FRAAL3774 hypothetical protein YP_003408468.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sma:SAV_5176 bacterioferritin comigratory protein YP_003408469.1 PFAM: protein of unknown function UPF0047; KEGG: sma:SAV_1557 hypothetical protein YP_003408470.1 KEGG: kra:Krad_3763 ribonuclease PH; TIGRFAM: ribonuclease PH; PFAM: 3' exoribonuclease; Exoribonuclease, phosphorolytic domain 2 YP_003408471.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; PFAM: Ham1 family protein; KEGG: mab:MAB_1485 HAM1 protein homolog (NTPase) YP_003408472.1 KEGG: kra:Krad_1237 hypothetical protein YP_003408473.1 KEGG: smd:Smed_5397 hypothetical protein YP_003408474.1 KEGG: mpa:MAP2328c hypothetical protein YP_003408475.1 PFAM: protein of unknown function DUF427; KEGG: mva:Mvan_3793 hypothetical protein YP_003408476.1 PFAM: regulatory protein TetR; KEGG: sen:SACE_1255 TetR transcription regulator YP_003408477.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: hmo:HM1_2081 signal transduction protein, putative YP_003408478.1 PFAM: Phosphoglycerate mutase; KEGG: kra:Krad_1028 phosphoglycerate mutase YP_003408479.1 PFAM: aldo/keto reductase; KEGG: nfa:nfa3270 putative oxidoreductase YP_003408480.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: saq:Sare_2294 anti-sigma-factor antagonist YP_003408481.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fre:Franean1_3930 acyl-CoA dehydrogenase domain-containing protein YP_003408482.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: ach:Achl_0564 NAD-dependent epimerase/dehydratase YP_003408483.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: kra:Krad_4019 major facilitator transporter YP_003408486.1 KEGG: rha:RHA1_ro04719 hypothetical protein YP_003408487.1 PFAM: alpha/beta hydrolase fold; KEGG: rop:ROP_12350 putative epoxide hydrolase YP_003408488.1 KEGG: mva:Mvan_1582 isopentenyl-diphosphate delta- isomerase; TIGRFAM: isopentenyl-diphosphate delta-isomerase, type 1; PFAM: NUDIX hydrolase YP_003408489.1 KEGG: kra:Krad_4134 hypothetical protein YP_003408490.1 PFAM: polysaccharide deacetylase; KEGG: mpa:MAP4286 hypothetical protein YP_003408491.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cyn:Cyan7425_3728 short-chain dehydrogenase/reductase SDR YP_003408493.1 PFAM: protein of unknown function DUF326; KEGG: tfu:Tfu_1443 hypothetical protein YP_003408494.1 KEGG: sen:SACE_4797 hypothetical protein YP_003408495.1 KEGG: mem:Memar_0862 hypothetical protein YP_003408496.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcv:Bcav_2860 glyoxalase/bleomycin resistance protein/dioxygenase YP_003408497.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aau:AAur_0367 putative lactoylglutathione lyase YP_003408498.1 KEGG: pna:Pnap_0087 hypothetical protein YP_003408499.1 PFAM: Berberine/berberine domain protein; KEGG: rxy:Rxyl_0426 FAD linked oxidase-like protein YP_003408500.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: kra:Krad_2862 ATPase central domain- containing protein YP_003408501.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: art:Arth_0471 resolvase YP_003408502.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: sen:SACE_3293 hypothetical protein YP_003408503.1 KEGG: gau:GAU_3395 hypothetical protein YP_003408504.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: mjl:Mjls_0384 activator of HSP90 ATPase 1 family protein YP_003408505.1 KEGG: scl:sce6642 sigma-54 dependent transcriptional regulator YP_003408506.1 PFAM: DNA polymerase beta domain protein region; KEGG: rop:ROP_29020 hypothetical protein YP_003408507.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcv:Bcav_2860 glyoxalase/bleomycin resistance protein/dioxygenase YP_003408509.1 PFAM: protein of unknown function DUF1486; KEGG: rha:RHA1_ro08519 hypothetical protein YP_003408510.1 KEGG: scl:sce5216 transposase YP_003408511.1 KEGG: fal:FRAAL0468 putative ATP/GTP binding protein YP_003408512.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sen:SACE_4341 methyltransferase YP_003408513.1 PFAM: phosphoribosyltransferase; KEGG: cms:CMS_2395 adenine phosphoribosyltransferase YP_003408514.1 KEGG: mgi:Mflv_5225 hypothetical protein YP_003408515.1 PFAM: OsmC family protein; KEGG: kra:Krad_3648 OsmC family protein YP_003408516.1 KEGG: ccs:CCNA_03498 transcriptional regulator, MarR/EmrR family protein YP_003408518.1 KEGG: kra:Krad_2033 hypothetical protein YP_003408519.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rer:RER_11250 Xre family DNA-binding protein YP_003408520.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: nca:Noca_4888 deaminase-reductase domain- containing protein YP_003408521.1 PFAM: alpha/beta hydrolase fold; KEGG: stp:Strop_1065 alpha/beta hydrolase fold YP_003408522.1 PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: mgi:Mflv_4519 putative GAF sensor protein YP_003408523.1 PFAM: Haem oxygenase-like; KEGG: fal:FRAAL5335 putative bacteriophytochrome heme oxygenase YP_003408524.1 PFAM: regulatory protein TetR; KEGG: nfa:nfa27450 putative transcriptional regulator YP_003408525.1 KEGG: sen:SACE_6169 hypothetical protein YP_003408526.1 KEGG: sgr:SGR_1990 putative transcriptional regulator YP_003408527.1 PFAM: Proline dehydrogenase; KEGG: sco:SCO5519 hypothetical protein YP_003408528.1 TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: tfu:Tfu_0433 delta-1-pyrroline-5-carboxylate dehydrogenase 1 YP_003408529.1 PFAM: protein of unknown function DUF1130; KEGG: rha:RHA1_ro08282 hypothetical protein YP_003408530.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sgr:SGR_6279 putative methyltransferase YP_003408531.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcv:Bcav_1684 major facilitator superfamily MFS_1 YP_003408533.1 KEGG: nca:Noca_0250 putative ABC transporter transmembrane protein YP_003408534.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_0249 ABC transporter related YP_003408535.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: sgr:SGR_6332 putative oxidoreductase YP_003408537.1 PFAM: regulatory protein TetR; KEGG: mgi:Mflv_3683 TetR family transcriptional regulator YP_003408538.1 KEGG: azo:azo1530 hypothetical protein YP_003408539.1 PFAM: TrkA-N domain protein; KEGG: azo:azo1529 fused NAD-binding/uncharacterized domain-containing protein YP_003408541.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fre:Franean1_7202 glyoxalase/bleomycin resistance protein/dioxygenase YP_003408542.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: fre:Franean1_7200 AraC family transcriptional regulator YP_003408543.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: bcv:Bcav_0110 phosphoesterase PA-phosphatase related YP_003408544.1 KEGG: ade:Adeh_0244 LigA YP_003408546.1 PFAM: class II aldolase/adducin family protein; KEGG: kra:Krad_2485 class II aldolase/adducin family protein YP_003408547.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ach:Achl_1740 transcriptional regulator, GntR family YP_003408548.1 PFAM: 2-keto-3-deoxygluconate permease; KEGG: aau:AAur_1906 2-keto-3-deoxygluconate permease YP_003408549.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: aau:AAur_1905 ribulose bisphosphate carboxylase, large subunit,-like protein YP_003408550.1 PFAM: type III effector Hrp-dependent outers; KEGG: aau:AAur_1904 YgbK domain-containing protein YP_003408551.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: aau:AAur_1903 L-threonine 3-dehydrogenase YP_003408552.1 PFAM: integrase family protein; KEGG: fre:Franean1_1457 integrase family protein YP_003408553.1 PFAM: regulatory protein MerR; KEGG: mbt:JTY_1081 hypothetical protein YP_003408554.1 PFAM: TrwC relaxase; SMART: AAA ATPase; KEGG: nca:Noca_1102 exonuclease V subunit alpha YP_003408556.1 KEGG: mab:MAB_1334c hypothetical protein YP_003408558.1 PFAM: PilT protein domain protein; KEGG: cyn:Cyan7425_0121 PilT protein domain protein YP_003408559.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: ace:Acel_1371 ErfK/YbiS/YcfS/YnhG family protein YP_003408560.1 KEGG: mmi:MMAR_5061 hypothetical protein YP_003408561.1 KEGG: aau:AAur_4052 hypothetical protein YP_003408562.1 PFAM: thiamineS protein; KEGG: rha:RHA1_ro02403 molybdopterin biosynthesis protein YP_003408565.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: kra:Krad_2431 putative GAF sensor protein YP_003408566.1 PFAM: protein of unknown function DUF1707; KEGG: tfu:Tfu_2119 hypothetical protein YP_003408567.1 PFAM: Exonuclease RNase T and DNA polymerase III; SMART: Exonuclease; KEGG: sen:SACE_1292 oligoribonuclease YP_003408568.1 KEGG: hau:Haur_4814 hypothetical protein YP_003408569.1 KEGG: sen:SACE_1520 hypothetical protein YP_003408570.1 PFAM: regulatory protein TetR; KEGG: sen:SACE_7040 TetR family transcriptional regulator (partial match) YP_003408571.1 PFAM: carboxyl transferase; KEGG: sen:SACE_7039 propionyl-CoA carboxylase, beta subunit YP_003408572.1 PFAM: Ferritin Dps family protein; KEGG: nca:Noca_1774 ferritin, Dps family protein YP_003408573.1 KEGG: kra:Krad_1462 hypothetical protein YP_003408574.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: sen:SACE_7038 putative acetyl-CoA carboxylase alpha subunit YP_003408575.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: sen:SACE_7037 acyl-CoA dehydrogenase YP_003408576.1 PFAM: cyclase family protein; KEGG: rrs:RoseRS_1211 cyclase family protein YP_003408577.1 KEGG: sen:SACE_6728 putative glycerate kinase; TIGRFAM: glycerate kinase; PFAM: glycerate kinase YP_003408578.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: saq:Sare_4357 alcohol dehydrogenase YP_003408579.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: swi:Swit_1379 3-demethylubiquinone-9 3- methyltransferase YP_003408580.1 KEGG: pzu:PHZ_c3100 hypothetical protein YP_003408581.1 KEGG: kra:Krad_0241 hypothetical protein YP_003408582.1 KEGG: sma:SAV_3220 hypothetical protein YP_003408583.1 KEGG: sgr:SGR_4235 FO synthase; TIGRFAM: 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit; 7,8-didemethyl-8-hydroxy-5- deazariboflavin synthase, CofG subunit; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003408584.1 KEGG: dge:Dgeo_0382 hypothetical protein YP_003408585.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: dge:Dgeo_0381 ABC transporter related YP_003408586.1 KEGG: tro:trd_1502 hypothetical protein YP_003408587.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: rrs:RoseRS_1234 ECF subfamily RNA polymerase sigma-24 factor YP_003408588.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: tfu:Tfu_0578 putative reductase YP_003408589.1 PFAM: NUDIX hydrolase; KEGG: mva:Mvan_4523 NUDIX hydrolase YP_003408590.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sen:SACE_0489 GDSL family lipase YP_003408591.1 KEGG: rxy:Rxyl_2783 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003408592.1 PFAM: Luciferase-like, subgroup; KEGG: aau:AAur_3081 putative alkanal monooxygenase (FMN-linked) YP_003408593.1 PFAM: Hemolysin-type calcium-binding region; KEGG: ter:Tery_4644 allergen V5/TPX-1 related YP_003408595.1 KEGG: fre:Franean1_7120 hypothetical protein YP_003408602.1 PFAM: restriction endonuclease; KEGG: mhu:Mhun_0477 restriction endonuclease YP_003408605.1 PFAM: Bifunctional DNA primase/polymerase; KEGG: lsa:LSA0594 hypothetical protein YP_003408606.1 KEGG: reh:H16_B2382 putative helicase YP_003408610.1 KEGG: zmo:ZMO1966 hypothetical protein YP_003408611.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bcv:Bcav_3750 glyoxalase/bleomycin resistance protein/dioxygenase YP_003408612.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: sen:SACE_5095 phage integrase family site specific recombinase YP_003408613.1 PFAM: glycoside hydrolase family 30; KEGG: fal:FRAAL0799 putative glycosyl hydrolase YP_003408614.1 PFAM: Hpt domain protein; KEGG: kra:Krad_0331 Hpt domain-containing protein YP_003408615.1 KEGG: kra:Krad_0332 response regulator receiver protein; TIGRFAM: diguanylate cyclase; PFAM: response regulator receiver; glycosyl transferase family 2; SMART: response regulator receiver YP_003408616.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: kra:Krad_0333 response regulator receiver protein YP_003408617.1 KEGG: kra:Krad_0334 PAS/PAC sensor signal transduction histidine kinase; TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; GAF domain protein; PAS fold-4 domain protein; PAS fold domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein YP_003408618.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: saq:Sare_3930 single-strand binding protein YP_003408619.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcv:Bcav_2642 ABC transporter related YP_003408620.1 PFAM: thioesterase superfamily protein; KEGG: sco:SCO2676 hypothetical protein YP_003408621.1 KEGG: mxa:MXAN_1784 hypothetical protein YP_003408622.1 PFAM: protein of unknown function DUF307; KEGG: sma:SAV_4892 hypothetical protein YP_003408623.1 PFAM: MOSC domain containing protein; KEGG: fal:FRAAL1642 hypothetical protein YP_003408624.1 PFAM: cobalt transport protein; KEGG: dra:DR_2468 hypothetical protein YP_003408625.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: plu:plu3849 hypothetical protein YP_003408626.1 PFAM: BioY protein; KEGG: dsh:Dshi_3685 BioY protein YP_003408627.1 KEGG: aau:AAur_2123 hypothetical protein YP_003408628.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_2122 ribose ABC transporter, ATP- binding protein YP_003408629.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rha:RHA1_ro01389 alpha-glucosidase YP_003408630.1 PFAM: globin; KEGG: fre:Franean1_5317 globin YP_003408631.1 PFAM: major facilitator superfamily MFS_1; KEGG: sgr:SGR_2123 major facilitator superfamily permease YP_003408632.1 PFAM: MscS Mechanosensitive ion channel; KEGG: fal:FRAAL1849 putative mechanosensitive ion channel protein YP_003408633.1 PFAM: peptidase S9A prolyl oligopeptidase domain protein beta-propeller; peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: sen:SACE_1333 prolyl oligopeptidase YP_003408634.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: fre:Franean1_5313 HNH endonuclease YP_003408635.1 KEGG: fal:FRAAL0034 hypothetical protein YP_003408636.1 KEGG: GK21128 gene product from transcript GK21128- RA YP_003408637.1 KEGG: GH15499 gene product from transcript GH15499- RA YP_003408638.1 PFAM: peptidase C60 sortase A and B; KEGG: cmi:CMM_2387 hypothetical protein YP_003408639.1 TIGRFAM: kynureninase; PFAM: aminotransferase class V; KEGG: swi:Swit_0679 kynureninase YP_003408640.1 PFAM: Amidase; KEGG: nca:Noca_3358 amidase YP_003408641.1 KEGG: similar to KIAA0545 protein YP_003408642.1 PFAM: protein of unknown function DUF477; KEGG: sen:SACE_1337 hypothetical protein YP_003408643.1 TIGRFAM: aminopeptidase N; PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sen:SACE_1339 membrane alanyl aminopeptidase YP_003408644.1 PFAM: DSBA oxidoreductase; KEGG: mjl:Mjls_3608 DsbA oxidoreductase YP_003408645.1 PFAM: Protein of unknown function DUF2210; KEGG: kra:Krad_3523 hypothetical protein YP_003408646.1 TIGRFAM: ribose 5-phosphate isomerase; sugar- phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: sco:SCO2627 ribose-5-phosphate isomerase B YP_003408647.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mab:MAB_4532c hypothetical protein YP_003408648.1 PFAM: protein of unknown function UPF0099; KEGG: msm:MSMEG_2176 hypothetical protein YP_003408649.1 KEGG: cms:CMS_1056 putative lipoprotein YP_003408650.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: kra:Krad_3609 RNA polymerase factor sigma-70 YP_003408651.1 PFAM: regulatory protein LysR; LysR substrate- binding; KEGG: msm:MSMEG_0471 transcriptional regulator LysR family protein YP_003408652.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: msm:MSMEG_0468 integral membrane protein YP_003408653.1 KEGG: cgt:cgR_2379 hypothetical protein YP_003408654.1 PFAM: Protein of unknown function DUF2088; KEGG: ssp:SSP0177 hypothetical protein YP_003408655.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase; KEGG: fre:Franean1_0164 circadian phase modifier CpmA YP_003408656.1 PFAM: protein of unknown function DUF111; KEGG: fre:Franean1_4211 hypothetical protein YP_003408657.1 PFAM: glycosyl transferase group 1; KEGG: rxy:Rxyl_0689 glycosyl transferase, group 1 YP_003408659.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: kra:Krad_4477 response regulator receiver/ANTAR domain-containing protein YP_003408660.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: kra:Krad_0786 short-chain dehydrogenase/reductase SDR YP_003408661.1 SMART: helix-turn-helix domain protein; KEGG: fre:Franean1_3750 helix-turn-helix domain- containing protein YP_003408662.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: mab:MAB_2534c hypothetical protein YP_003408663.1 PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein; KEGG: kra:Krad_0098 putative PAS/PAC sensor protein YP_003408664.1 PFAM: ATP-binding region ATPase domain protein; KEGG: fal:FRAAL5693 hypothetical protein YP_003408665.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: kra:Krad_2032 PfpI family intracellular peptidase YP_003408666.1 TIGRFAM: trigger factor; PFAM: trigger factor domain; trigger factor domain protein; peptidylprolyl isomerase FKBP-type; KEGG: sen:SACE_1359 putative cell division trigger factor YP_003408667.1 PFAM: peptidase S14 ClpP; KEGG: rop:ROP_10880 ATP-dependent Clp protease proteolytic subunit YP_003408668.1 PFAM: peptidase S14 ClpP; KEGG: cjk:jk0545 ATP-dependent Clp protease proteolytic subunit YP_003408669.1 KEGG: ace:Acel_0739 ATP-dependent protease ATP- binding subunit ClpX; TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; zinc finger C4 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase YP_003408670.1 PFAM: protein of unknown function DUF559; KEGG: nca:Noca_4255 hypothetical protein YP_003408671.1 KEGG: fre:Franean1_5200 valyl-tRNA synthetase YP_003408672.1 TIGRFAM: FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sgr:SGR_4928 putative folylpolyglutamate synthase YP_003408673.1 KEGG: nfa:nfa13500 hypothetical protein YP_003408674.1 KEGG: fre:Franean1_5270 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_003408675.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: sen:SACE_1403 putative Fe-S oxidoreductase YP_003408676.1 PFAM: Protein of unknown function DUF2344; KEGG: fra:Francci3_1217 hypothetical protein YP_003408677.1 KEGG: sco:SCO2599 hypothetical protein; TIGRFAM: ribonuclease, Rne/Rng family; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; RNA binding S1 domain protein YP_003408678.1 TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21; KEGG: sen:SACE_1414 50S ribosomal protein L21 YP_003408679.1 TIGRFAM: ribosomal protein L27; PFAM: ribosomal protein L27; KEGG: bcv:Bcav_1623 ribosomal protein L27 YP_003408680.1 TIGRFAM: GTP-binding protein Obg/CgtA; small GTP- binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP1/OBG domain protein; GTP-binding protein HSR1-related; KEGG: sen:SACE_1416 GTPase ObgE YP_003408681.1 KEGG: stp:Strop_0386 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase; PUA domain containing protein; SMART: PUA domain containing protein YP_003408682.1 KEGG: tfu:Tfu_2433 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003408683.1 KEGG: ddr:Deide_05540 putative carboxyvinyl- carboxyphosphonate phosphorylmutase YP_003408685.1 KEGG: fre:Franean1_3609 hypothetical protein YP_003408686.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mjl:Mjls_3876 MarR family transcriptional regulator YP_003408687.1 TIGRFAM: prevent-host-death family protein; KEGG: ttj:TTHA0488 antitoxin of toxin-antitoxin stability system YP_003408688.1 PFAM: PilT protein domain protein; KEGG: ttj:TTHA0487 hypothetical protein YP_003408689.1 PFAM: ferric-uptake regulator; KEGG: kra:Krad_3370 ferric uptake regulator family protein YP_003408690.1 PFAM: ABC-3 protein; KEGG: nca:Noca_1935 ABC-3 protein YP_003408691.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saq:Sare_3815 ABC transporter related YP_003408692.1 PFAM: periplasmic solute binding protein; KEGG: bcv:Bcav_1775 periplasmic solute binding protein YP_003408693.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: saq:Sare_0456 gamma-glutamyl phosphate reductase YP_003408694.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: fal:FRAAL1932 hypothetical protein YP_003408695.1 PFAM: VWA containing CoxE family protein; KEGG: fal:FRAAL1933 hypothetical protein YP_003408696.1 KEGG: sma:SAV_5478 nicotinic acid mononucleotide adenylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003408697.1 TIGRFAM: iojap-like protein; PFAM: Iojap-related protein; KEGG: sen:SACE_1432 hypothetical protein YP_003408698.1 PFAM: Phosphoglycerate mutase; KEGG: fre:Franean1_5245 phosphoglycerate mutase YP_003408699.1 TIGRFAM: degV family protein; PFAM: DegV family protein; KEGG: sen:SACE_1434 hypothetical protein YP_003408700.1 PFAM: protein of unknown function DUF1486; KEGG: ana:alr3729 hypothetical protein YP_003408701.1 KEGG: stp:Strop_3469 helix-hairpin-helix repeat- containing competence protein ComEA; TIGRFAM: competence protein ComEA helix-hairpin- helix repeat protein; PFAM: Soluble ligand binding domain; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003408702.1 TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta; KEGG: sen:SACE_1438 hypothetical protein YP_003408703.1 TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20; KEGG: pac:PPA0898 30S ribosomal protein S20 YP_003408704.1 KEGG: stp:Strop_2284 aminoglycoside phosphotransferase YP_003408705.1 TIGRFAM: GTP-binding protein LepA; small GTP- binding protein; PFAM: GTP-binding protein LepA domain protein; elongation factor G domain protein; elongation factor Tu domain 2 protein; protein synthesis factor GTP-binding; KEGG: mva:Mvan_3881 GTP-binding protein LepA YP_003408706.1 PFAM: MOSC domain containing protein; KEGG: fal:FRAAL4156 hypothetical protein YP_003408707.1 PFAM: Tetratricopeptide TPR_4; KEGG: sgr:SGR_6071 LAL subfamily transcriptional regulator YP_003408708.1 PFAM: FAD linked oxidase domain protein; KEGG: nca:Noca_1767 FAD linked oxidase domain- containing protein YP_003408709.1 PFAM: FAD linked oxidase domain protein; KEGG: mva:Mvan_1816 FAD linked oxidase domain- containing protein YP_003408710.1 PFAM: Clp domain protein; KEGG: rop:ROP_16970 hypothetical protein YP_003408711.1 KEGG: bcv:Bcav_3019 hypothetical protein YP_003408712.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: ach:Achl_1868 YbaK/prolyl-tRNA synthetase associated region YP_003408713.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nca:Noca_1728 alcohol dehydrogenase YP_003408714.1 KEGG: proteophosphoglycan ppg1 YP_003408715.1 TIGRFAM: selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein; KEGG: mav:MAV_0420 selenide, water dikinase YP_003408716.1 KEGG: rxy:Rxyl_2106 hypothetical protein YP_003408718.1 KEGG: rxy:Rxyl_2105 ABC-type dipeptide transport system periplasmic component-like protein YP_003408719.1 KEGG: mav:MAV_0418 selenocysteine synthase; TIGRFAM: L-seryl-tRNA selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase YP_003408720.1 TIGRFAM: selenocysteine-specific translation elongation factor; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; Elongation factor SelB winged helix 3; KEGG: sen:SACE_3551 selenocysteine-specific translation elongation factor YP_003408722.1 PFAM: protein of unknown function DUF1696; KEGG: cbt:CLH_1621 hypothetical protein YP_003408723.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sen:SACE_1464 putative enoyl-CoA hydratase/isomerase family protein YP_003408724.1 KEGG: sma:SAV_5566 coproporphyrinogen III oxidase; TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: HemN domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003408725.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL4807 putative ABC transporter ATP- binding protein YP_003408726.1 PFAM: ABC-2 type transporter; KEGG: sco:SCO2306 ABC transporter integral membrane protein YP_003408727.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: sco:SCO5131 two-component system sensor kinase YP_003408728.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sma:SAV_3132 two-component system response regulator YP_003408729.1 KEGG: ace:Acel_0155 hypothetical protein YP_003408730.1 TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; regulatory protein DeoR; KEGG: sma:SAV_5569 heat-inducible transcription repressor YP_003408731.1 KEGG: fal:FRAAL2007 heat shock protein (HSP40), co- chaperone with DnaK; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; DnaJ central domain protein; heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_003408732.1 PFAM: protein of unknown function DUF558; KEGG: sgr:SGR_4996 16S ribosomal RNA methyltransferase RsmE YP_003408733.1 PFAM: protein of unknown function DUF405; protein of unknown function DUF418; KEGG: nfa:nfa31750 hypothetical protein YP_003408734.1 PFAM: regulatory protein TetR; KEGG: saq:Sare_0961 TetR family transcriptional regulator YP_003408735.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_2783 binding-protein-dependent transport systems inner membrane component YP_003408736.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_2784 ABC transporter-related protein YP_003408737.1 TIGRFAM: phosphonate ABC transporter, periplasmic phosphonate-binding protein; KEGG: kra:Krad_2785 phosphonate ABC transporter, periplasmic phosphonate-binding protein YP_003408738.1 PFAM: Extracellular ligand-binding receptor; KEGG: mno:Mnod_0331 extracellular ligand-binding receptor YP_003408739.1 PFAM: inner-membrane translocator; KEGG: bav:BAV2833 ABC transporter, permease protein YP_003408740.1 PFAM: ABC transporter related; inner-membrane translocator; SMART: AAA ATPase; KEGG: vap:Vapar_1228 ABC transporter related YP_003408741.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: chy:CHY_2228 high affinity branched-chain amino acid ABC transporter, ATP-binding protein YP_003408742.1 PFAM: histidine triad (HIT) protein; KEGG: tfu:Tfu_0843 protein kinase C inhibitor YP_003408743.1 PFAM: TspO/MBR family protein; KEGG: art:Arth_1976 TspO and MBR like proteins YP_003408744.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: nfa:nfa46890 putative enoyl-CoA hydratase/isomerase family protein YP_003408745.1 PFAM: PhoH family protein; KEGG: stp:Strop_3453 PhoH family protein YP_003408746.1 PFAM: protein of unknown function UPF0054; KEGG: mbt:JTY_2375 hypothetical protein YP_003408747.1 PFAM: CBS domain containing protein; protein of unknown function DUF21; transporter-associated region; SMART: CBS domain containing protein; KEGG: saq:Sare_3830 CBS domain-containing protein YP_003408748.1 KEGG: sen:SACE_1486 hypothetical protein YP_003408749.1 TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein; KEGG: sen:SACE_1487 GTP-binding protein Era YP_003408750.1 TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO; KEGG: sen:SACE_1492 DNA repair protein RecO YP_003408751.1 TIGRFAM: undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase; KEGG: nfa:nfa14530 putative undecaprenyl pyrophosphate synthetase YP_003408752.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: nca:Noca_1939 hypothetical protein YP_003408753.1 KEGG: msm:MSMEG_0753 hypothetical protein YP_003408754.1 TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; KEGG: bcv:Bcav_1776 glycyl-tRNA synthetase YP_003408755.1 PFAM: Protein of unknown function DUF2191; KEGG: mbt:JTY_1587 hypothetical protein YP_003408756.1 PFAM: PilT protein domain protein; KEGG: mbt:JTY_1588 hypothetical protein YP_003408757.1 TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS; KEGG: sen:SACE_7086 dihydrouridine synthase TIM- barrel protein nifR3 YP_003408759.1 TIGRFAM: pyruvate, phosphate dikinase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein; KEGG: tfu:Tfu_0863 pyruvate phosphate dikinase YP_003408760.1 PFAM: protein of unknown function DUF218; KEGG: tfu:Tfu_0864 hypothetical protein YP_003408761.1 KEGG: bcv:Bcav_3895 hypothetical protein YP_003408762.1 KEGG: stp:Strop_3425 DNA primase; TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; zinc finger CHC2-family protein; TOPRIM domain protein; DNA primase, DnaB-helicase binding domain; DNA primase DnaG DnaB-binding; SMART: zinc finger CHC2-family protein; DNA primase DnaG DnaB-binding; Toprim sub domain protein YP_003408763.1 KEGG: saq:Sare_3801 hypothetical protein YP_003408764.1 KEGG: cmi:CMM_0589 hypothetical protein YP_003408765.1 PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: amr:AM1_6086 TPR repeat-containing transcriptional regulator LuxR YP_003408766.1 KEGG: amr:AM1_6084 hypothetical protein YP_003408767.1 KEGG: sma:SAV_489 hypothetical protein YP_003408768.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_933 ABC transporter ATP-binding protein YP_003408769.1 KEGG: sen:SACE_6628 hypothetical protein YP_003408770.1 KEGG: sma:SAV_489 hypothetical protein YP_003408771.1 PFAM: Alcohol dehydrogenase GroES domain protein; KEGG: fre:Franean1_1586 alcohol dehydrogenase YP_003408772.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: fre:Franean1_1585 transcriptional regulator YP_003408773.1 KEGG: syn:sll7047 hypothetical protein YP_003408774.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: aau:AAur_3967 putative quinone oxidoreductase YP_003408775.1 KEGG: tfu:Tfu_1944 putative secreted protein YP_003408776.1 TIGRFAM: phosphohistidine phosphatase SixA; PFAM: Phosphoglycerate mutase; KEGG: nca:Noca_2573 phosphoglycerate mutase YP_003408777.1 KEGG: sus:Acid_7230 hypothetical protein YP_003408778.1 KEGG: kra:Krad_4592 putative PGRS-family protein YP_003408779.1 PFAM: protein of unknown function DUF156; KEGG: rop:ROP_33320 hypothetical protein YP_003408780.1 PFAM: Heavy metal transport/detoxification protein; KEGG: fre:Franean1_5745 heavy metal transport/detoxification protein YP_003408781.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: stp:Strop_0766 NADH-ubiquinone/plastoquinone oxidoreductase, chain 3 YP_003408782.1 KEGG: mjl:Mjls_4489 hypothetical protein YP_003408783.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: sgr:SGR_790 putative NADH dehydrogenase chain H YP_003408784.1 KEGG: sgr:SGR_789 putative NADH dehydrogenase chain J YP_003408785.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sgr:SGR_788 putative NADH dehydrogenase chain K YP_003408786.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: stp:Strop_0771 NADH dehydrogenase (quinone) YP_003408787.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: mjl:Mjls_4494 proton-translocating NADH- quinone oxidoreductase, chain M YP_003408788.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: art:Arth_4498 NADH dehydrogenase (quinone) YP_003408789.1 KEGG: gdi:GDI1955 hypothetical protein YP_003408791.1 PFAM: ABC transporter related; KEGG: sma:SAV_2097 UvrA-like protein YP_003408792.1 TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: rer:RER_08690 tryptophan synthase beta chain YP_003408793.1 PFAM: Aldehyde Dehydrogenase; KEGG: sen:SACE_4203 glycine betaine aldehyde dehydrogenase YP_003408794.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: ach:Achl_3496 choline/carnitine/betaine transporter YP_003408795.1 TIGRFAM: choline dehydrogenase; PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: stp:Strop_1639 choline dehydrogenase YP_003408796.1 KEGG: sen:SACE_3150 ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase YP_003408797.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; KEGG: bcv:Bcav_3483 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003408798.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sen:SACE_4349 GntR family transcriptional regulator YP_003408800.1 PFAM: Gluconate transporter; Citrate transporter; TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: sen:SACE_4766 gluconate permease YP_003408801.1 PFAM: Transketolase domain protein; KEGG: sen:SACE_4350 transketolase YP_003408802.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: sen:SACE_4351 transketolase, C-terminal subunit YP_003408803.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_4767 short-chain dehydrogenase/reductase SDR YP_003408804.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_51470 oxidoreductase YP_003408805.1 PFAM: Aldehyde Dehydrogenase; KEGG: sen:SACE_6014 aldehyde dehydrogenase (NAD+) YP_003408806.1 PFAM: Aldehyde Dehydrogenase; KEGG: rxy:Rxyl_2917 aldehyde dehydrogenase YP_003408807.1 PFAM: purine catabolism PurC domain protein; KEGG: sen:SACE_6021 regulatory protein YP_003408808.1 TIGRFAM: 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III; KEGG: nca:Noca_3205 4-aminobutyrate aminotransferase YP_003408809.1 PFAM: NAD-glutamate dehydrogenase; KEGG: sen:SACE_4093 NAD-specific glutamate dehydrogenase YP_003408811.1 PFAM: Peptidoglycan-binding domain 1 protein; KEGG: rer:RER_22520 hypothetical protein YP_003408812.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: stp:Strop_0951 AsnC/Lrp family regulatory protein YP_003408813.1 TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase; KEGG: rha:RHA1_ro03527 guanidinobutyrase YP_003408814.1 PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; helix-turn- helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rop:ROP_33220 putative Xre family DNA-binding protein YP_003408815.1 PFAM: amino acid permease-associated region; KEGG: rha:RHA1_ro03529 amino acid transporter YP_003408816.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: rop:ROP_33240 putative hydrolase YP_003408817.1 PFAM: amine oxidase; KEGG: sco:SCO1454 amino oxidase YP_003408818.1 PFAM: GCN5-related N-acetyltransferase; KEGG: art:Arth_3711 GCN5-related N- acetyltransferase YP_003408819.1 PFAM: aminoglycoside phosphotransferase; KEGG: fal:FRAAL3947 putative TfxG-like immunity protein against TfxA-like peptides YP_003408820.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: pla:Plav_3504 regulatory protein ArsR YP_003408821.1 PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: rer:RER_51090 hypothetical protein YP_003408822.1 KEGG: rop:ROP_15640 hypothetical protein YP_003408823.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: msm:MSMEG_4313 glyoxalase/bleomycin resistance protein/dioxygenase YP_003408824.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro10427 enoyl-CoA hydratase YP_003408825.1 PFAM: alpha/beta hydrolase fold; KEGG: saq:Sare_3034 alpha/beta hydrolase fold YP_003408826.1 KEGG: msm:MSMEG_5648 hypothetical protein YP_003408827.1 PFAM: Copper amine oxidase ; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; KEGG: msm:MSMEG_3847 tyramine oxidase YP_003408828.1 KEGG: nca:Noca_3224 agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_003408829.1 PFAM: amino acid permease-associated region; KEGG: sgr:SGR_4227 putative amino acid transporter YP_003408830.1 PFAM: MMPL domain protein; KEGG: kra:Krad_0755 MmpL domain-containing protein YP_003408831.1 PFAM: regulatory protein TetR; KEGG: kra:Krad_0756 TetR family transcriptional regulator YP_003408832.1 PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: fra:Francci3_2288 Fis family transcriptional regulator YP_003408833.1 PFAM: amidohydrolase 2; KEGG: sco:SCO0257 hypothetical protein YP_003408834.1 PFAM: protein of unknown function DUF59; KEGG: sco:SCO0258 hypothetical protein YP_003408835.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: rxy:Rxyl_1958 alcohol dehydrogenase GroES- like protein YP_003408836.1 TIGRFAM: pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; pyruvate carboxyltransferase; Conserved carboxylase region; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: sco:SCO0546 pyruvate carboxylase YP_003408837.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: cms:CMS_0018 serine/threonine kinase YP_003408838.1 PFAM: protein of unknown function DUF162; KEGG: fal:FRAAL3347 hypothetical protein YP_003408839.1 TIGRFAM: iron-sulfur cluster binding protein; PFAM: protein of unknown function DUF162; KEGG: fal:FRAAL3348 putative Fe4-S4 ferredoxin YP_003408840.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; KEGG: mjl:Mjls_4766 hypothetical protein YP_003408841.1 PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI; KEGG: rha:RHA1_ro04084 LacI family transcription regulator YP_003408842.1 KEGG: sen:SACE_3078 hypothetical protein YP_003408843.1 KEGG: fal:FRAAL0377 hydantoin racemase YP_003408845.1 KEGG: sen:SACE_3045 hypothetical protein YP_003408847.1 KEGG: ade:Adeh_1681 PE-PGRS family protein YP_003408848.1 PFAM: GCN5-related N-acetyltransferase; KEGG: krh:KRH_01810 hypothetical protein YP_003408849.1 KEGG: kra:Krad_1320 hypothetical protein YP_003408850.1 KEGG: met:M446_4505 hypothetical protein YP_003408851.1 PFAM: protein of unknown function DUF1540; KEGG: ach:Achl_3021 hypothetical protein YP_003408852.1 KEGG: fre:Franean1_5795 hypothetical protein YP_003408853.1 KEGG: hsl:OE3980R brp-like protein YP_003408854.1 PFAM: protein of unknown function DUF1622; KEGG: stp:Strop_2412 hypothetical protein YP_003408855.1 KEGG: mjl:Mjls_2138 hypothetical protein YP_003408857.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: aau:AAur_0822 putative thiosulfate sulfurtransferase YP_003408858.1 KEGG: kra:Krad_2444 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003408859.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: kra:Krad_1793 alcohol dehydrogenase YP_003408860.1 KEGG: aau:AAur_1865 hypothetical protein YP_003408861.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: tfu:Tfu_2540 glycerophosphoryl diester phosphodiesterase, putative YP_003408862.1 PFAM: intradiol ring-cleavage dioxygenase; KEGG: bcv:Bcav_0924 intradiol ring-cleavage dioxygenase YP_003408863.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: kra:Krad_4529 alpha/beta hydrolase domain- containing protein YP_003408864.1 PFAM: Patatin; KEGG: dar:Daro_1906 patatin YP_003408867.1 PFAM: aminotransferase class I and II; KEGG: bcv:Bcav_0562 aminotransferase class I and II YP_003408868.1 PFAM: FAD linked oxidase domain protein; protein of unknown function DUF224 cysteine-rich region domain protein; KEGG: rop:ROP_04860 putative FAD-linked oxidase YP_003408869.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: aau:AAur_3465 putative acyl carrier protein phosphodiesterase YP_003408870.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: fal:FRAAL6084 MarR family transcriptional regulator YP_003408871.1 PFAM: Inorganic pyrophosphatase; KEGG: sco:SCO3409 inorganic pyrophosphatase YP_003408872.1 PFAM: NmrA family protein; NAD-dependent epimerase/dehydratase; KEGG: sus:Acid_1459 NmrA family protein YP_003408873.1 KEGG: sma:SAV_2599 hypothetical protein YP_003408875.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: stp:Strop_0801 alpha amylase, catalytic region YP_003408877.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; PFAM: ferredoxin; KEGG: rop:ROP_07750 putative succinate dehydrogenase iron-sulfur protein YP_003408878.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: ace:Acel_1865 succinate dehydrogenase flavoprotein subunit YP_003408879.1 KEGG: sco:SCO5108 integral membrane protein YP_003408881.1 KEGG: ach:Achl_1315 glutamine amidotransferase YP_003408882.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: mgi:Mflv_0301 EmrB/QacA family drug resistance transporter YP_003408883.1 KEGG: rha:RHA1_ro01708 NahA family Na(+)/H(+) antiporter; TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; DSBA oxidoreductase; cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_003408884.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: tpe:Tpen_1167 glycerophosphoryl diester phosphodiesterase YP_003408885.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sgr:SGR_2151 putative anti-sigma factor antagonist YP_003408886.1 KEGG: nfa:nfa54530 hypothetical protein YP_003408887.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: msm:MSMEG_3312 hemerythrin HHE cation binding domain-containing protein YP_003408889.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rxy:Rxyl_0375 acyl-CoA dehydrogenase-like protein YP_003408890.1 PFAM: Ion transport 2 domain protein ; TrkA-N domain protein; KEGG: ppr:PBPRB0054 putative potassium channel related protein YP_003408891.1 KEGG: sgr:SGR_6859 hypothetical protein YP_003408893.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: tfu:Tfu_2361 tyrosine protein kinase:serine/threonine protein kinase YP_003408894.1 PFAM: UspA domain protein; KEGG: fal:FRAAL4243 stress-inducible protein YP_003408895.1 PFAM: Protein of unknown function DUF2505; KEGG: ach:Achl_1296 proteinase inhibitor I25 cystatin YP_003408896.1 KEGG: tro:trd_A0188 hypothetical protein YP_003408897.1 KEGG: sco:SCO5659 integral membrane protein YP_003408898.1 PFAM: amino acid permease-associated region; KEGG: ach:Achl_3674 amino acid permease-associated region YP_003408899.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rer:RER_00850 fatty-acid--CoA ligase YP_003408900.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: nca:Noca_0724 iron-containing alcohol dehydrogenase YP_003408901.1 PFAM: thioesterase superfamily protein; KEGG: dal:Dalk_0151 thioesterase superfamily protein YP_003408903.1 KEGG: fre:Franean1_3352 superfamily I DNA and RNA helicase YP_003408904.1 PFAM: Methyltransferase type 11; UbiE/COQ5 methyltransferase; O-methyltransferase family 2; Methyltransferase type 12; KEGG: mpt:Mpe_A0328 hypothetical protein YP_003408905.1 PFAM: FAD linked oxidase domain protein; Cytokinin dehydrogenase 1 FAD and cytokinin binding; KEGG: hau:Haur_4772 FAD linked oxidase domain- containing protein YP_003408906.1 PFAM: O-methyltransferase family 2; Methyltransferase type 12; KEGG: bja:blr7665 putative methyltransferase YP_003408907.1 KEGG: bur:Bcep18194_B1688 hypothetical protein YP_003408908.1 PFAM: peptidase S15; KEGG: rxy:Rxyl_2440 peptidase S15 YP_003408909.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fra:Francci3_2240 zinc-binding alcohol dehydrogenase YP_003408910.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: pzu:PHZ_c2816 short-chain dehydrogenase/reductase SDR YP_003408911.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro10186 hypothetical protein YP_003408912.1 PFAM: helix-turn-helix Fis-type; GAF domain protein; KEGG: fra:Francci3_2510 transcriptional regulator YP_003408913.1 PFAM: FAD dependent oxidoreductase; KEGG: rha:RHA1_ro08185 monooxygenase YP_003408914.1 PFAM: Ethyl tert-butyl ether degradation EthD; KEGG: rha:RHA1_ro10185 ethyl tert-butyl ether degradation protein YP_003408915.1 PFAM: Alpha/beta hydrolase fold-3 domain protein; KEGG: sth:STH2125 putative lipase YP_003408916.1 PFAM: FAD dependent oxidoreductase; KEGG: scl:sce4944 putative monooxygenase YP_003408917.1 PFAM: Polyketide cyclase/dehydrase; KEGG: sen:SACE_5694 hypothetical protein YP_003408918.1 PFAM: beta-lactamase; KEGG: rrs:RoseRS_2480 beta-lactamase YP_003408919.1 KEGG: sen:SACE_4970 transposase YP_003408927.1 KEGG: Hypothetical protein CBG02561 YP_003408928.1 KEGG: sen:SACE_3043 hypothetical protein YP_003408929.1 KEGG: bxe:Bxe_B2676 hypothetical protein YP_003408931.1 PFAM: MaoC domain protein dehydratase; KEGG: nca:Noca_4109 dehydratase YP_003408932.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: msm:MSMEG_2033 oxidoreductase, zinc-binding dehydrogenase family protein YP_003408933.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: mav:MAV_4319 transposase, mutator family protein YP_003408934.1 KEGG: ach:Achl_4562 LSR2-like protein YP_003408935.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rha:RHA1_ro10219 NADPH:quinone reductase YP_003408936.1 PFAM: NB-ARC domain protein; KEGG: fal:FRAAL0468 putative ATP/GTP binding protein YP_003408937.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: mkm:Mkms_3569 phage integrase family protein YP_003408938.1 TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: nfa:nfa37590 RNA polymerase sigma factor YP_003408939.1 PFAM: ROK family protein; KEGG: sen:SACE_1802 polyphosphate glucokinase YP_003408940.1 PFAM: inositol monophosphatase; KEGG: fre:Franean1_5201 inositol-phosphate phosphatase YP_003408941.1 KEGG: msm:MSMEG_2761 putative secreted alanine rich protein YP_003408942.1 PFAM: aminoglycoside phosphotransferase; KEGG: nfa:nfa35450 putative phosphotransferase YP_003408943.1 KEGG: rop:ROP_68120 hypothetical protein YP_003408944.1 KEGG: stp:Strop_1479 hypothetical protein YP_003408945.1 KEGG: mlu:Mlut_13120 deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_003408946.1 KEGG: stp:Strop_1482 hypothetical protein YP_003408947.1 KEGG: rsa:RSal33209_0101 lipase/esterase YP_003408948.1 PFAM: nucleic acid binding OB-fold tRNA/helicase- type; KEGG: stp:Strop_1483 nucleic acid binding, OB-fold, tRNA/helicase-type YP_003408949.1 KEGG: stp:Strop_1484 hypothetical protein YP_003408950.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: mav:MAV_3583 TrkB protein YP_003408951.1 PFAM: TrkA-N domain protein; KEGG: sgr:SGR_1656 putative potassium transporter YP_003408952.1 KEGG: rha:RHA1_ro08730 amino acid transporter YP_003408953.1 PFAM: deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; KEGG: sen:SACE_1814 23S rRNA methyltransferase/RumA YP_003408954.1 KEGG: GH10507 gene product from transcript GH10507- RA YP_003408956.1 KEGG: tfu:Tfu_2899 hypothetical protein YP_003408957.1 TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: fra:Francci3_1326 1-deoxy-D-xylulose-5- phosphate synthase YP_003408958.1 PFAM: protein of unknown function DUF77; KEGG: bcv:Bcav_0453 protein of unknown function DUF77 YP_003408959.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; Enoyl-CoA hydratase/isomerase; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: sen:SACE_1823 fatty acid oxidation complex alpha subunit YP_003408960.1 KEGG: tfu:Tfu_1903 thiolase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003408961.1 PFAM: 3'-5' exonuclease; HRDC domain protein; SMART: 3'-5' exonuclease; HRDC domain protein; KEGG: fal:FRAAL2098 putative ribonuclease D (partial match) YP_003408962.1 KEGG: saq:Sare_1473 hypothetical protein YP_003408963.1 KEGG: stp:Strop_1532 uroporphyrinogen decarboxylase; TIGRFAM: uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D) YP_003408964.1 KEGG: sen:SACE_1837 protoporphyrinogen oxidase; TIGRFAM: protoporphyrinogen oxidase; PFAM: amine oxidase; FAD dependent oxidoreductase YP_003408965.1 PFAM: Chlorite dismutase; KEGG: nca:Noca_3671 chlorite dismutase YP_003408968.1 KEGG: sen:SACE_1845 peptide methionine sulfoxide reductase; TIGRFAM: methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase B YP_003408969.1 KEGG: tfu:Tfu_0849 regulatory proteins, IclR YP_003408970.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: fre:Franean1_5449 cold-shock DNA-binding domain-containing protein YP_003408973.1 PFAM: YCII-related; KEGG: nfa:nfa10920 hypothetical protein YP_003408974.1 PFAM: Transglycosylase-associated protein; KEGG: cmi:CMM_2668 hypothetical protein YP_003408975.1 KEGG: dge:Dgeo_2156 thioesterase-like protein YP_003408977.1 TIGRFAM: phenylacetate-CoA oxygenase/reductase, PaaK subunit; PFAM: ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: sen:SACE_3548 putative phenylacetic acid degradation NADH oxidoreductase YP_003408978.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaJ subunit; PFAM: protein of unknown function DUF59; KEGG: sen:SACE_3547 phenylacetic acid degradation protein YP_003408979.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaI subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: sen:SACE_3546 putative phenylacetic acid degradation protein YP_003408980.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaH subunit; PFAM: phenylacetic acid degradation B; KEGG: rha:RHA1_ro02858 phenylacetate-CoA oxygenase subunit PaaB YP_003408981.1 TIGRFAM: phenylacetate-CoA oxygenase, PaaG subunit; PFAM: phenylacetic acid catabolic family protein; KEGG: sen:SACE_3544 phenylacetate-CoA oxygenase subunit PaaA YP_003408982.1 TIGRFAM: phenylacetate-CoA ligase; KEGG: sen:SACE_3542 phenylacetate-CoA ligase YP_003408983.1 PFAM: regulatory protein TetR; KEGG: sen:SACE_3541 TetR family transcriptional regulator YP_003408984.1 TIGRFAM: phenylacetic acid degradation protein paaN; PFAM: MaoC domain protein dehydratase; Aldehyde Dehydrogenase; KEGG: rop:ROP_25870 phenylacetic acid degradation protein PaaN YP_003408985.1 PFAM: cytochrome P450; KEGG: sma:SAV_2165 cytochrome P450 YP_003408986.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa21590 putative 3-hydroxyacyl-CoA dehydrogenase YP_003408987.1 PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: ach:Achl_2302 general substrate transporter YP_003408988.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: nfa:nfa27820 putative transcriptional regulator YP_003408989.1 PFAM: Aldehyde Dehydrogenase; KEGG: art:Arth_3511 aldehyde dehydrogenase YP_003408990.1 KEGG: sen:SACE_3942 putative fumarylacetoacetase; TIGRFAM: fumarylacetoacetase; PFAM: Domain of unknown function DUF1969; fumarylacetoacetate (FAA) hydrolase YP_003408991.1 KEGG: mab:MAB_0889c hypothetical protein YP_003408992.1 PFAM: homogentisate 12-dioxygenase; Cupin 2 conserved barrel domain protein; KEGG: sen:SACE_3944 homogentisate 1,2-dioxygenase YP_003408993.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sen:SACE_3057 pentachlorophenol monooxygenase YP_003408994.1 PFAM: beta-lactamase domain protein; KEGG: rop:ROP_33350 hypothetical protein YP_003408995.1 PFAM: regulatory protein TetR; KEGG: aau:AAur_pTC20083 putative transcription regulator YP_003408996.1 PFAM: amino acid permease-associated region; KEGG: rha:RHA1_ro02835 phenylethylamine permease YP_003408997.1 PFAM: Copper amine oxidase ; Copper amine oxidase N3-terminal; Copper amine oxidase N2-terminal; KEGG: rha:RHA1_ro02834 tyramine oxidase YP_003408998.1 KEGG: mva:Mvan_5767 hypothetical protein YP_003408999.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: rer:RER_50600 AsnC family transcriptional regulator YP_003409000.1 KEGG: rop:ROP_51350 4-hydroxyphenylpyruvate dioxygenase; TIGRFAM: 4-hydroxyphenylpyruvate dioxygenase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase YP_003409001.1 PFAM: protein of unknown function DUF1212; KEGG: kra:Krad_0990 hypothetical protein YP_003409003.1 PFAM: aminotransferase class-III; KEGG: sen:SACE_4673 hypothetical protein YP_003409004.1 KEGG: rxy:Rxyl_2908 L-alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003409005.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: rha:RHA1_ro07256 NADH dehydrogenase YP_003409006.1 PFAM: Aldehyde Dehydrogenase; KEGG: rha:RHA1_ro07077 aldehyde dehydrogenase (NAD+) YP_003409007.1 KEGG: blj:BLD_1980 hypothetical protein YP_003409008.1 PFAM: FAD dependent oxidoreductase; fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: sen:SACE_3881 sarcosine oxidase subunit beta YP_003409009.1 PFAM: Aldehyde Dehydrogenase; KEGG: mkm:Mkms_1287 delta-1-piperideine-6- carboxylate dehydrogenase YP_003409010.1 PFAM: plasmid stabilization system; KEGG: nca:Noca_2680 plasmid stabilization system protein YP_003409011.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rop:ROP_29430 hypothetical protein YP_003409012.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: sma:SAV_1696 hypothetical protein YP_003409013.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: saq:Sare_1488 TAP domain-containing protein YP_003409014.1 PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: stp:Strop_1546 ATP-dependent DNA ligase YP_003409015.1 TIGRFAM: prevent-host-death family protein; KEGG: bpy:Bphyt_4380 prevent-host-death family protein YP_003409016.1 PFAM: PilT protein domain protein; KEGG: cti:RALTA_B2161 putative toxin of a toxin/antitoxin system YP_003409017.1 KEGG: rer:RER_22200 hypothetical protein YP_003409018.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: fre:Franean1_5167 hypothetical protein YP_003409019.1 KEGG: nfa:nfa18050 putative glycosyl hydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: alpha amylase catalytic region; glycoside hydrolase family 13 domain protein; SMART: alpha amylase catalytic sub domain YP_003409020.1 KEGG: kra:Krad_1085 hypothetical protein YP_003409021.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_1084 ABC transporter-related protein YP_003409022.1 PFAM: protein of unknown function DUF214; KEGG: kra:Krad_1083 hypothetical protein YP_003409023.1 PFAM: Transglycosylase domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: sen:SACE_3572 secreted protein YP_003409024.1 KEGG: cms:CMS_1526 putative sugar synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003409025.1 KEGG: ach:Achl_2618 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003409027.1 KEGG: fre:Franean1_2050 excinuclease ABC subunit B; TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; UvrB/UvrC protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein YP_003409028.1 PFAM: Integral membrane protein TerC; KEGG: bcv:Bcav_2183 integral membrane protein TerC YP_003409029.1 PFAM: Integral membrane protein TerC; KEGG: rsa:RSal33209_2291 tellurium resistance protein YP_003409030.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; dienelactone hydrolase; WD40 domain protein beta Propeller; KEGG: bcv:Bcav_0810 peptidase S9 prolyl oligopeptidase active site domain protein YP_003409031.1 PFAM: Acetamidase/Formamidase; KEGG: mjl:Mjls_2686 acetamidase/formamidase YP_003409032.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: msm:MSMEG_4382 dehydrogenase/reductase SDR family protein member 10 YP_003409034.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; SMART: WD-40 repeat protein; KEGG: sen:SACE_3314 putative surface layer protein YP_003409036.1 PFAM: NAD-dependent epimerase/dehydratase; NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; dTDP-4- dehydrorhamnose reductase; KEGG: nfa:nfa11930 hypothetical protein YP_003409037.1 PFAM: Abortive infection protein; KEGG: nfa:nfa11920 hypothetical protein YP_003409038.1 KEGG: fal:FRAAL5368 hypothetical protein YP_003409039.1 KEGG: fal:FRAAL5367 hypothetical protein YP_003409040.1 PFAM: Resolvase domain; Recombinase; KEGG: krh:KRH_09230 putative recombinase YP_003409044.1 KEGG: hor:Hore_03470 hypothetical protein YP_003409047.1 KEGG: lxx:Lxx24010 hypothetical protein YP_003409049.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: dac:Daci_3732 XRE family transcriptional regulator YP_003409050.1 KEGG: dol:Dole_2519 hypothetical protein YP_003409051.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; KEGG: nca:Noca_1319 histidine kinase, dimerisation and phosphoacceptor region YP_003409052.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: nca:Noca_1318 response regulator receiver YP_003409053.1 PFAM: major facilitator superfamily MFS_1; KEGG: ara:Arad_9746 florfenicol/chloramphenicol resistance transporter protein YP_003409054.1 KEGG: amr:AM1_6084 hypothetical protein YP_003409055.1 KEGG: sma:SAV_489 hypothetical protein YP_003409056.1 PFAM: transposase IS4 family protein; KEGG: sen:SACE_4676 IS402-like transposase YP_003409057.1 KEGG: fal:FRAAL2980 putative ABC transporter transmembrane protein YP_003409058.1 KEGG: mac:MA2339 hypothetical protein YP_003409059.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; SMART: adenylyl cyclase class-3/4/guanylyl cyclase; KEGG: fre:Franean1_1585 transcriptional regulator YP_003409060.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: fre:Franean1_1585 transcriptional regulator YP_003409061.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02951 oxidoreductase, Zn-binding YP_003409062.1 KEGG: ddr:Deide_3p02352 hypothetical protein YP_003409063.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO7812 insertion element transposase YP_003409064.1 KEGG: nfa:nfa41880 hypothetical protein YP_003409065.1 KEGG: kra:Krad_2656 hypothetical protein YP_003409066.1 KEGG: cms:CMS_2322 putative integral membrane protein YP_003409067.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: fre:Franean1_3739 MarR family transcriptional regulator YP_003409068.1 KEGG: kra:Krad_2652 DoxX family protein YP_003409069.1 PFAM: conserved hypothetical protein; KEGG: sen:SACE_1301 hypothetical protein YP_003409070.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: mva:Mvan_5896 glyoxalase/bleomycin resistance protein/dioxygenase YP_003409071.1 KEGG: hypothetical protein YP_003409072.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: nca:Noca_4003 extradiol ring-cleavage dioxygenase III subunit B YP_003409073.1 PFAM: NmrA family protein; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; NAD-dependent epimerase/dehydratase; KEGG: krh:KRH_16940 putative NAD(P)H--quinone oxidoreductase YP_003409074.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: sma:SAV_6038 two-component system sensor kinase YP_003409075.1 KEGG: fre:Franean1_4684 two component LuxR family transcriptional regulator; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; Bacterio-opsin activator HTH domain protein; sigma-70 region 4 domain protein; SMART: response regulator receiver; regulatory protein LuxR YP_003409076.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_2001 ABC transporter-related protein YP_003409077.1 KEGG: sco:SCO6361 integral membrane protein YP_003409078.1 KEGG: kra:Krad_2656 hypothetical protein YP_003409079.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: kra:Krad_0098 putative PAS/PAC sensor protein YP_003409080.1 KEGG: ade:Adeh_0244 LigA YP_003409081.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: mkm:Mkms_4915 hypothetical protein YP_003409082.1 PFAM: TrwC relaxase; KEGG: nca:Noca_1721 exonuclease V subunit alpha YP_003409083.1 PFAM: class II aldolase/adducin family protein; KEGG: kra:Krad_2485 class II aldolase/adducin family protein YP_003409084.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: ach:Achl_1740 transcriptional regulator, GntR family YP_003409085.1 PFAM: 2-keto-3-deoxygluconate permease; KEGG: aau:AAur_1906 2-keto-3-deoxygluconate permease YP_003409086.1 PFAM: ribulose bisphosphate carboxylase large chain; KEGG: aau:AAur_1905 ribulose bisphosphate carboxylase, large subunit,-like protein YP_003409087.1 PFAM: type III effector Hrp-dependent outers; KEGG: aau:AAur_1904 YgbK domain-containing protein YP_003409088.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: ach:Achl_1737 alcohol dehydrogenase GroES domain protein YP_003409089.1 KEGG: hypothetical protein LOC745340 YP_003409090.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rha:RHA1_ro10031 transposase YP_003409091.1 KEGG: bcv:Bcav_1817 riboflavin biosynthesis protein RibD YP_003409092.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: tbd:Tbd_2343 lactoylglutathione lyase YP_003409093.1 PFAM: protein of unknown function DUF1486; KEGG: gvi:glr0227 hypothetical protein YP_003409094.1 KEGG: gem:GM21_2393 putative signal peptide protein YP_003409095.1 PFAM: beta-lactamase domain protein; KEGG: ace:Acel_1108 beta-lactamase domain- containing protein YP_003409096.1 PFAM: Amidase; KEGG: saq:Sare_0864 amidase YP_003409097.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: stp:Strop_3111 excinuclease ABC subunit A YP_003409098.1 PFAM: Saccharopine dehydrogenase; KEGG: art:Arth_3626 saccharopine dehydrogenase YP_003409100.1 PFAM: alpha/beta hydrolase fold; KEGG: scl:sce0898 hydrolase YP_003409101.1 KEGG: fre:Franean1_2059 excinuclease ABC subunit C; TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; helix-hairpin- helix motif; UvrB/UvrC protein; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_003409102.1 PFAM: conserved hypothetical protein; KEGG: fal:FRAAL4592 hypothetical protein YP_003409103.1 PFAM: protein of unknown function UPF0052 and CofD; KEGG: ace:Acel_1112 hypothetical protein YP_003409104.1 PFAM: protein of unknown function DUF199; Sporulation regulator WhiA-like; KEGG: sen:SACE_2141 sporulation regulatory protein YP_003409105.1 KEGG: kra:Krad_2931 glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase YP_003409106.1 PFAM: phosphoglycerate kinase; KEGG: saq:Sare_3324 phosphoglycerate kinase YP_003409107.1 TIGRFAM: triosephosphate isomerase; PFAM: triosephosphate isomerase; KEGG: stp:Strop_3096 triose-phosphate isomerase YP_003409108.1 PFAM: extracellular solute-binding protein family 5; KEGG: fal:FRAAL2821 dipeptide-binding lipoprotein YP_003409109.1 TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; KEGG: rop:ROP_69610 protein-export membrane protein SecG YP_003409110.1 KEGG: sma:SAV_6300 electron transport protein YP_003409112.1 TIGRFAM: 6-phosphogluconolactonase; PFAM: glucosamine/galactosamine-6-phosphate isomerase; KEGG: fre:Franean1_2071 6-phosphogluconolactonase YP_003409113.1 PFAM: Glucose-6-phosphate dehydrogenase subunit; KEGG: fre:Franean1_2072 putative OxPP cycle protein OpcA YP_003409114.1 KEGG: fre:Franean1_2073 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003409115.1 PFAM: phosphoglucose isomerase (PGI); KEGG: saq:Sare_3318 phosphoglucose isomerase (PGI) YP_003409116.1 TIGRFAM: transaldolase; PFAM: Transaldolase; KEGG: fre:Franean1_2074 transaldolase YP_003409117.1 TIGRFAM: transketolase; PFAM: Transketolase central region; Transketolase domain protein; KEGG: sgr:SGR_4907 transketolase YP_003409119.1 TIGRFAM: protoheme IX farnesyltransferase; PFAM: UbiA prenyltransferase; KEGG: saq:Sare_3315 protoheme IX farnesyltransferase YP_003409120.1 PFAM: cytochrome oxidase assembly; KEGG: saq:Sare_3312 cytochrome oxidase assembly YP_003409121.1 PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; UvrB/UvrC protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2156 ATPase YP_003409122.1 PFAM: regulatory protein ArsR; regulatory protein MarR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein MarR; KEGG: saq:Sare_3311 putative transcriptional regulator YP_003409123.1 TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein; KEGG: nfa:nfa35600 hypothetical protein YP_003409124.1 TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein; KEGG: nca:Noca_2551 FeS assembly protein SufD YP_003409125.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: tfu:Tfu_1985 putative dioxygenase YP_003409126.1 KEGG: sma:SAV_6328 ABC transporter ATP-binding protein; TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; SMART: AAA ATPase YP_003409127.1 TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: tfu:Tfu_1983 cysteine desulfurase YP_003409128.1 TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein; KEGG: sgr:SGR_5600 putative nitrogen fixation protein NifU-related protein YP_003409129.1 PFAM: protein of unknown function DUF59; KEGG: saq:Sare_3304 hypothetical protein YP_003409130.1 KEGG: sma:SAV_6817 integral membrane protein YP_003409131.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fre:Franean1_2204 ABC transporter related YP_003409132.1 KEGG: fal:FRAAL4541 putative transcriptional regulator YP_003409133.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: sen:SACE_2189 enoyl-CoA hydratase/isomerase YP_003409134.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: saq:Sare_3298 ABC transporter related YP_003409135.1 KEGG: oih:OB3306 hypothetical protein YP_003409136.1 PFAM: small multidrug resistance protein; KEGG: mpa:MAP3451 SugE YP_003409137.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiX protein; KEGG: bcv:Bcav_2795 cobalamin (vitamin B12) biosynthesis CbiX protein YP_003409138.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: stp:Strop_3070 short-chain dehydrogenase/reductase SDR YP_003409139.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: nca:Noca_2876 aconitate hydratase YP_003409140.1 PFAM: Silent information regulator protein Sir2; KEGG: tfu:Tfu_1336 Sir2 family regulator YP_003409141.1 KEGG: kra:Krad_1096 hypothetical protein YP_003409142.1 KEGG: sru:SRU_0720 hypothetical protein YP_003409143.1 PFAM: AMP-dependent synthetase and ligase; KEGG: fra:Francci3_2165 AMP-dependent synthetase and ligase YP_003409144.1 PFAM: NLP/P60 protein; KEGG: sen:SACE_3797 cell wall-associated hydrolase YP_003409145.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: sen:SACE_3795 MoxR family transcriptional regulator YP_003409146.1 PFAM: protein of unknown function DUF58; KEGG: sen:SACE_3794 putative von Willebrand factor, type A YP_003409147.1 PFAM: von Willebrand factor type A; SMART: von Willebrand factor type A; KEGG: stp:Strop_3026 von Willebrand factor, type A YP_003409148.1 PFAM: glycosyl transferase family 2; KEGG: bcv:Bcav_0985 glycosyl transferase family 2 YP_003409149.1 KEGG: kra:Krad_1355 hypothetical protein YP_003409150.1 KEGG: mbt:JTY_0035 hypothetical protein YP_003409151.1 PFAM: Amidase; KEGG: tro:trd_A0461 glutamyl-tRNA(Gln) amidotransferase subunit A (Glu-ADT subunit A) YP_003409152.1 PFAM: glucose-6-phosphate dehydrogenase; KEGG: cmi:CMM_1074 glucose-6-phosphate 1- dehydrogenase YP_003409153.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: msm:MSMEG_2026 short chain dehydrogenase YP_003409155.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: bov:BOV_A0405 hypothetical protein YP_003409156.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: kra:Krad_2717 alcohol dehydrogenase YP_003409157.1 SMART: helix-turn-helix domain protein; KEGG: fre:Franean1_3750 helix-turn-helix domain- containing protein YP_003409158.1 KEGG: bvi:Bcep1808_3726 phospho-2-dehydro-3- deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase I/KDSA YP_003409159.1 KEGG: kra:Krad_2674 hypothetical protein YP_003409160.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: tfu:Tfu_1843 3-oxoacyl-[acyl-carrier-protein] reductase YP_003409161.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: fal:FRAAL4522 enoyl-(acyl carrier protein) reductase YP_003409162.1 KEGG: stp:Strop_3023 ferrochelatase; TIGRFAM: ferrochelatase; PFAM: ferrochelatase YP_003409163.1 KEGG: kra:Krad_4312 alpha/beta hydrolase fold YP_003409165.1 KEGG: saq:Sare_3247 hypothetical protein YP_003409166.1 PFAM: protein of unknown function DUF107; KEGG: aau:AAur_2191 putative integral membrane protein YP_003409167.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: sen:SACE_3781 SPFH domain-containing protein/band 7 family protein YP_003409168.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma- B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 4 domain protein; KEGG: fra:Francci3_3755 sigma 28 subunit YP_003409169.1 KEGG: sen:SACE_4196 anti-sigma factor YP_003409170.1 PFAM: Stage II sporulation E family protein; ATP- binding region ATPase domain protein; Sulfate transporter/antisigma-factor antagonist STAS; SMART: protein phosphatase 2C domain protein; KEGG: nca:Noca_1923 stage II sporulation E family protein YP_003409171.1 KEGG: stp:Strop_1767 hypothetical protein YP_003409172.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_4702 anti-sigma-factor antagonist YP_003409173.1 KEGG: stp:Strop_3723 hypothetical protein YP_003409174.1 PFAM: protein of unknown function DUF1360; KEGG: fal:FRAAL4124 hypothetical protein YP_003409175.1 KEGG: stp:Strop_3969 Ku domain-containing protein; TIGRFAM: Ku protein; PFAM: Ku domain protein; SMART: Ku domain protein YP_003409176.1 TIGRFAM: DNA polymerase LigD, ligase domain protein; PFAM: ATP dependent DNA ligase; ATP dependent DNA ligase domain protein; KEGG: fal:FRAAL4382 hypothetical protein YP_003409177.1 TIGRFAM: DNA polymerase LigD, polymerase domain protein; PFAM: DNA primase small subunit; KEGG: saq:Sare_4351 DNA polymerase LigD polymerase subunit YP_003409178.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid- binding ACT domain protein; KEGG: gtn:GTNG_1633 formyltetrahydrofolate deformylase YP_003409179.1 PFAM: transposase IS4 family protein; KEGG: mac:MA2835 transposase YP_003409180.1 PFAM: ferric-uptake regulator; KEGG: nfa:nfa3250 putative ferric uptake regulator YP_003409181.1 PFAM: Catalase related subgroup; Catalase domain protein; KEGG: nfa:nfa55390 putative catalase YP_003409182.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rer:RER_26210 4- hydroxybenzoate/protocatechuate transporter YP_003409183.1 PFAM: protein of unknown function DUF75; KEGG: fra:Francci3_1247 hypothetical protein YP_003409184.1 PFAM: protein of unknown function UPF0118; KEGG: rha:RHA1_ro05875 hypothetical protein YP_003409185.1 KEGG: rha:RHA1_ro07230 hypothetical protein YP_003409187.1 KEGG: sen:SACE_4188 hypothetical protein YP_003409188.1 PFAM: dienelactone hydrolase; KEGG: mrd:Mrad2831_2733 carboxymethylenebutenolidase YP_003409189.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: sco:SCO1414 ankyrin-like protein YP_003409190.1 PFAM: protein of unknown function UPF0118; KEGG: sen:SACE_4221 hypothetical protein YP_003409191.1 KEGG: kra:Krad_4362 hypothetical protein YP_003409192.1 KEGG: sen:SACE_4995 hypothetical protein YP_003409193.1 PFAM: protein of unknown function DUF350; KEGG: kra:Krad_2756 hypothetical protein YP_003409194.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: rer:RER_54860 3-oxoacyl-[acyl-carrier- protein] reductase YP_003409195.1 PFAM: lipolytic protein G-D-S-L family; KEGG: kra:Krad_3837 GDSL family lipase YP_003409196.1 KEGG: mba:Mbar_A2860 hypothetical protein YP_003409197.1 TIGRFAM: 40-residue YVTN family beta-propeller repeat protein; KEGG: sen:SACE_3314 putative surface layer protein YP_003409198.1 KEGG: nfa:nfa29480 hypothetical protein YP_003409199.1 PFAM: GAF domain protein; KEGG: mjl:Mjls_0619 putative GAF sensor protein YP_003409200.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: nca:Noca_2635 response regulator receiver YP_003409201.1 PFAM: ATP-binding region ATPase domain protein; KEGG: kra:Krad_4531 integral membrane sensor signal transduction histidine kinase YP_003409202.1 PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; KEGG: stp:Strop_2286 cupin 2 domain-containing protein YP_003409203.1 PFAM: major facilitator superfamily MFS_1; KEGG: ach:Achl_1609 major facilitator superfamily MFS_1 YP_003409204.1 KEGG: stp:Strop_3614 hypothetical protein YP_003409205.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: kra:Krad_3895 carbohydrate kinase FGGY YP_003409206.1 PFAM: ferredoxin-dependent glutamate synthase; KEGG: mjl:Mjls_5647 ferredoxin-dependent glutamate synthase YP_003409207.1 PFAM: NADPH-dependent FMN reductase; KEGG: nfa:nfa23490 hypothetical protein YP_003409208.1 PFAM: Luciferase-like, subgroup; KEGG: nfa:nfa23480 putative monooxygenase YP_003409209.1 KEGG: kra:Krad_1108 secreted protein YP_003409210.1 TIGRFAM: regulatory protein, FmdB family; PFAM: Putative regulatory protein FmdB; KEGG: krh:KRH_22990 putative regulatory protein YP_003409211.1 PFAM: Acetamidase/Formamidase; KEGG: rxy:Rxyl_2658 formamidase YP_003409212.1 PFAM: Acetamidase/Formamidase; KEGG: mab:MAB_0587 acetamidase/formamidase YP_003409213.1 PFAM: AmiS/UreI transporter; KEGG: sma:SAV_1943 amidate substrates transporter protein YP_003409214.1 KEGG: rha:RHA1_ro02123 hypothetical protein YP_003409215.1 PFAM: protein of unknown function DUF1486; KEGG: sus:Acid_4282 hypothetical protein YP_003409216.1 PFAM: protein of unknown function UPF0060; KEGG: sma:SAV_4756 hypothetical protein YP_003409217.1 KEGG: xau:Xaut_1107 hypothetical protein YP_003409218.1 PFAM: protein of unknown function DUF72; KEGG: art:Arth_3443 hypothetical protein YP_003409219.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: chl:Chy400_2105 protein of unknown function DUF6 transmembrane YP_003409220.1 KEGG: psb:Psyr_3754 hypothetical protein YP_003409222.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL3816 hypothetical protein YP_003409223.1 KEGG: sen:SACE_6633 hypothetical protein YP_003409224.1 PFAM: pentapeptide repeat protein; KEGG: fra:Francci3_2300 pentapeptide repeat- containing protein YP_003409225.1 KEGG: nfa:nfa43510 hypothetical protein YP_003409226.1 KEGG: fra:Francci3_3100 hypothetical protein YP_003409227.1 PFAM: NAD(P) transhydrogenase beta subunit; KEGG: sma:SAV_403 pyridine nucleotide transhydrogenase, beta subunit YP_003409228.1 TIGRFAM: NAD(P) transhydrogenase, alpha subunit; PFAM: alanine dehydrogenase/PNT domain protein; KEGG: msm:MSMEG_4109 NAD(P) transhydrogenase subunit alpha YP_003409229.1 KEGG: kra:Krad_1568 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003409230.1 PFAM: Metal-dependent hydrolase HDOD; KEGG: kra:Krad_1569 putative signal transduction protein YP_003409231.1 PFAM: beta-lactamase; KEGG: ter:Tery_1472 beta-lactamase YP_003409232.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nca:Noca_3727 acyl-CoA dehydrogenase domain- containing protein YP_003409233.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rop:ROP_15910 putative acyl-CoA dehydrogenase YP_003409234.1 KEGG: saq:Sare_5063 hypothetical protein YP_003409235.1 KEGG: ade:Adeh_3797 hypothetical protein YP_003409236.1 KEGG: kra:Krad_0099 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003409237.1 KEGG: SORBIDRAFT_03g045870; hypothetical protein YP_003409238.1 PFAM: monooxygenase FAD-binding; KEGG: rso:RSc2242 4-hydroxybenzoate 3-monooxygenase YP_003409239.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: mva:Mvan_0559 regulatory proteins, IclR YP_003409240.1 TIGRFAM: protocatechuate 3,4-dioxygenase, beta subunit; PFAM: intradiol ring-cleavage dioxygenase; KEGG: rer:RER_52860 protocatechuate 3,4-dioxygenase beta subunit YP_003409241.1 KEGG: sen:SACE_3513 protocatechuate 3,4-dioxygenase alpha chain; TIGRFAM: protocatechuate 3,4-dioxygenase, alpha subunit; PFAM: intradiol ring-cleavage dioxygenase YP_003409242.1 TIGRFAM: 3-carboxy-cis,cis-muconate cycloisomerase; PFAM: fumarate lyase; KEGG: rha:RHA1_ro01337 3-carboxy-cis,cis-muconate cycloisomerase YP_003409243.1 TIGRFAM: 3-oxoadipate enol-lactonase; PFAM: alpha/beta hydrolase fold; KEGG: msm:MSMEG_1897 3-oxoadipate enol-lactonase YP_003409244.1 TIGRFAM: 4-carboxymuconolactone decarboxylase; PFAM: Carboxymuconolactone decarboxylase; KEGG: xcv:XCV0385 4-carboxymuconolactone decarboxylase YP_003409245.1 PFAM: phosphoglucose isomerase (PGI); KEGG: rop:ROP_56360 glucose-6-phosphate isomerase YP_003409246.1 PFAM: Aldehyde Dehydrogenase; KEGG: rer:RER_55880 benzaldehyde dehydrogenase YP_003409248.1 KEGG: DNAJC6; DnaJ (Hsp40) homolog, subfamily C, member 6 ; K09526 DnaJ homolog, subfamily C, member 6 YP_003409249.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_1563 major facilitator transporter YP_003409250.1 KEGG: nca:Noca_0092 UreA amidolyase related protein; TIGRFAM: urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; SMART: Allophanate hydrolase subunit 2 YP_003409251.1 PFAM: Allophanate hydrolase subunit 1; SMART: Allophanate hydrolase subunit 1; KEGG: sen:SACE_1551 allophanate hydrolase YP_003409252.1 PFAM: LamB/YcsF family protein; KEGG: tfu:Tfu_1970 LamB/YcsF family protein YP_003409253.1 KEGG: mlu:Mlut_19210 Mn2+/Fe2_ transporter, NRAMP family YP_003409254.1 PFAM: protein of unknown function DUF1445; KEGG: sma:SAV_6940 hypothetical protein YP_003409255.1 KEGG: sco:SCO7036 argininosuccinate synthase; TIGRFAM: argininosuccinate synthase; PFAM: argininosuccinate synthase YP_003409256.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: nca:Noca_3842 bifunctional deaminase- reductase-like protein YP_003409257.1 SMART: Helix-turn-helix, AraC domain; KEGG: msm:MSMEG_0307 transcriptional regulator, AraC family protein YP_003409258.1 PFAM: glycosyl transferase group 1; KEGG: smd:Smed_5686 glycosyl transferase group 1 YP_003409259.1 PFAM: oxidoreductase domain protein; Semialdehyde dehydrogenase NAD - binding; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1 YP_003409260.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: smd:Smed_5686 glycosyl transferase group 1 YP_003409261.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; KEGG: rlg:Rleg_5611 glycosyl transferase group 1 YP_003409262.1 PFAM: glycosyl transferase group 1; KEGG: met:M446_4972 glycosyl transferase group 1 YP_003409263.1 KEGG: hypothetical protein LOC739429 YP_003409264.1 PFAM: protein of unknown function DUF664; KEGG: stp:Strop_1293 hypothetical protein YP_003409265.1 KEGG: sco:SCO7018 hypothetical protein YP_003409266.1 PFAM: glycosyl transferase family 2; KEGG: nmu:Nmul_A0414 glycosyl transferase family protein YP_003409267.1 PFAM: glycosyl transferase group 1; KEGG: fra:Francci3_3362 glycosyl transferase, group 1 YP_003409268.1 PFAM: glycosyl transferase family 9; KEGG: bgl:bglu_1g14980 glycosyl transferase, family 9 YP_003409269.1 PFAM: glycosyl transferase group 1; KEGG: sth:STH1101 glycosyl transferase YP_003409270.1 PFAM: Aldehyde Dehydrogenase; KEGG: mav:MAV_4936 succinic semialdehyde dehydrogenase YP_003409271.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mab:MAB_1486c putative oxidoreductase YP_003409272.1 TIGRFAM: pyridoxal kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: met:M446_1429 pyridoxal kinase YP_003409273.1 PFAM: Cysteinyl-tRNA synthetase class Ia; KEGG: ace:Acel_1446 cysteine--tRNA ligase YP_003409274.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: fal:FRAAL5813 hypothetical protein YP_003409276.1 PFAM: SNARE associated Golgi protein; KEGG: nca:Noca_2072 integral membrane protein YP_003409277.1 PFAM: Lysine exporter protein (LYSE/YGGA); KEGG: rer:RER_03090 hypothetical protein YP_003409278.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kra:Krad_3936 GCN5-related N- acetyltransferase YP_003409279.1 KEGG: fre:Franean1_1077 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12- binding domain protein; ArgK protein YP_003409280.1 PFAM: periplasmic binding protein; KEGG: tfu:Tfu_2810 hypothetical protein YP_003409281.1 PFAM: Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; globin; KEGG: sen:SACE_7206 flavohemoprotein YP_003409282.1 TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; KEGG: ace:Acel_1027 DivIVA family protein YP_003409283.1 PFAM: Oxidoreductase FAD-binding domain protein; globin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: sgr:SGR_2266 putative flavohemoprotein YP_003409284.1 PFAM: beta-lactamase; KEGG: fal:FRAAL0627 putative penicillin-binding protein YP_003409285.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: sgr:SGR_996 putative fatty acid-CoA racemase YP_003409286.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fre:Franean1_4567 enoyl-CoA hydratase/isomerase YP_003409287.1 PFAM: YceI family protein; KEGG: nca:Noca_4605 YceI family protein YP_003409288.1 PFAM: cysteine dioxygenase type I; KEGG: sen:SACE_6133 cysteine dioxygenase YP_003409289.1 KEGG: fre:Franean1_4936 hypothetical protein YP_003409290.1 PFAM: sulfotransferase; KEGG: fal:FRAAL3803 putative sulfotransferase YP_003409291.1 TIGRFAM: chromate transporter, chromate ion transporter (CHR) family; PFAM: Chromate transporter; KEGG: rha:RHA1_ro03075 chromate transporter YP_003409292.1 PFAM: Domain of unknown function DUF1905; KEGG: sgr:SGR_4781 hypothetical protein YP_003409293.1 PFAM: Stage II sporulation E family protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: kra:Krad_0947 putative PAS/PAC sensor protein YP_003409294.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: rha:RHA1_ro05420 subtilisin YP_003409295.1 KEGG: rop:ROP_55200 hypothetical protein YP_003409296.1 KEGG: swi:Swit_1492 anti-sigma-factor antagonist YP_003409297.1 PFAM: Phosphogluconate dehydrogenase, NAD-binding, putative-like; 6-phosphogluconate dehydrogenase NAD- binding; KEGG: rxy:Rxyl_0198 6-phosphogluconate dehydrogenase, NAD-binding protein YP_003409298.1 KEGG: rer:RER_23890 6-phosphofructokinase; TIGRFAM: phosphofructokinase; PFAM: phosphofructokinase YP_003409299.1 KEGG: kra:Krad_3397 GCN5-related N- acetyltransferase; TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase YP_003409300.1 PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: sma:SAV_1777 shikimate 5-dehydrogenase YP_003409301.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: mno:Mnod_0121 major facilitator superfamily MFS_1 YP_003409302.1 PFAM: regulatory protein TetR; KEGG: sma:SAV_1778 TetR family transcriptional regulator YP_003409303.1 KEGG: nca:Noca_3395 hypothetical protein YP_003409304.1 PFAM: Thioredoxin domain; KEGG: ace:Acel_0542 thioredoxin YP_003409305.1 PFAM: SCP-like extracellular; SMART: Allergen V5/Tpx-1 family protein; KEGG: cyt:cce_4525 hypothetical protein YP_003409306.1 PFAM: response regulator receiver; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; SMART: response regulator receiver; KEGG: fal:FRAAL1961 putative thioredoxin reductase YP_003409307.1 PFAM: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; SMART: ATP-binding region ATPase domain protein; cyclic nucleotide-binding; KEGG: nfa:nfa52860 putative two-component system sensor kinase YP_003409308.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO0680 transmembrane efflux protein YP_003409309.1 PFAM: sodium:dicarboxylate symporter; KEGG: sen:SACE_5768 putative sodium:dicarboxylate symporter YP_003409310.1 PFAM: ATP-binding region ATPase domain protein; PAS fold-4 domain protein; helicase-associated; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; KEGG: sma:SAV_2816 two-component system sensor kinase YP_003409311.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sgr:SGR_2108 putative two-component system response regulator YP_003409312.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: rer:RER_19510 oxidoreductase YP_003409313.1 KEGG: cyt:cce_2329 hypothetical protein YP_003409314.1 PFAM: VanZ family protein; KEGG: sen:SACE_2366 hypothetical protein YP_003409315.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro00320 hydrolase YP_003409316.1 KEGG: rha:RHA1_ro00321 hypothetical protein YP_003409317.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sco:SCO4434 LysR family transcriptional regulator YP_003409318.1 PFAM: Luciferase-like, subgroup; KEGG: mmi:MMAR_2824 monooxygenase YP_003409319.1 KEGG: mmi:MMAR_5014 hypothetical protein YP_003409320.1 PFAM: beta-lactamase domain protein; KEGG: mva:Mvan_5799 ribonuclease Z YP_003409321.1 KEGG: rpe:RPE_2275 peptidase C14, caspase catalytic subunit P20 YP_003409322.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: mxa:MXAN_2371 G/U mismatch-specific DNA glycosylase YP_003409324.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fal:FRAAL5694 hypothetical protein YP_003409325.1 PFAM: helix-turn-helix HxlR type; KEGG: rpf:Rpic12D_3961 transcriptional regulator, HxlR family YP_003409326.1 PFAM: branched-chain amino acid transport; KEGG: nfa:nfa13090 hypothetical protein YP_003409327.1 PFAM: AzlC family protein; KEGG: bcv:Bcav_2467 AzlC family protein YP_003409328.1 KEGG: fre:Franean1_6685 hypothetical protein YP_003409329.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: saq:Sare_4051 pyridine nucleotide-disulphide oxidoreductase dimerisation region YP_003409330.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: mex:Mext_2974 cold-shock protein DNA-binding YP_003409332.1 KEGG: kra:Krad_0251 hypothetical protein YP_003409333.1 KEGG: bpr:GBP346_A2204 YCII-related domain superfamily protein YP_003409334.1 PFAM: ATP-binding region ATPase domain protein; KEGG: fre:Franean1_6671 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_003409335.1 PFAM: helicase domain protein; SMART: helicase domain protein; KEGG: gdj:Gdia_0436 helicase domain protein YP_003409336.1 KEGG: rba:RB4993 signal peptide YP_003409337.1 PFAM: phospholipase/Carboxylesterase; KEGG: sus:Acid_3441 phospholipase/carboxylesterase YP_003409338.1 KEGG: fre:Franean1_2468 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_003409339.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: bcv:Bcav_2970 transcriptional regulator, AraC family YP_003409340.1 KEGG: bcv:Bcav_2969 hypothetical protein YP_003409341.1 PFAM: protein of unknown function DUF336; KEGG: sco:SCO2848 hypothetical protein YP_003409342.1 PFAM: ribonuclease BN; KEGG: rer:RER_12720 hypothetical protein YP_003409343.1 KEGG: sco:SCO3824 ABC-transporter ATP-binding component; TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003409344.1 PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1236 ABC-2 type transporter YP_003409345.1 PFAM: tryptophan 23-dioxygenase; KEGG: aau:AAur_2058 tryptophan 2,3-dioxygenase YP_003409347.1 PFAM: low temperature requirement A; KEGG: npu:Npun_R4883 low temperature requirement A YP_003409348.1 PFAM: protein of unknown function DUF1211; KEGG: cmi:CMM_2863 hypothetical protein YP_003409349.1 PFAM: alpha/beta hydrolase fold; KEGG: rce:RC1_3345 hypothetical protein YP_003409350.1 KEGG: fre:Franean1_2324 hypothetical protein YP_003409351.1 KEGG: fre:Franean1_5625 hypothetical protein YP_003409352.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: rxy:Rxyl_3169 alpha amylase, catalytic region YP_003409355.1 KEGG: SORBIDRAFT_08g022240; hypothetical protein YP_003409356.1 PFAM: Abortive infection protein; KEGG: nfa:nfa7470 putative protease YP_003409357.1 KEGG: fre:Franean1_5320 hypothetical protein YP_003409358.1 KEGG: rer:RER_03220 hypothetical protein YP_003409359.1 KEGG: rer:RER_30990 hypothetical protein YP_003409360.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: kra:Krad_0498 NADP oxidoreductase coenzyme F420-dependent YP_003409361.1 PFAM: ANTAR domain protein; GAF domain protein; KEGG: kra:Krad_2459 response regulator receiver/ANTAR domain-containing protein YP_003409363.1 KEGG: rer:RER_07770 hypothetical protein YP_003409364.1 PFAM: protein of unknown function DUF899 thioredoxin family protein; KEGG: fra:Francci3_1617 protein of unknown function DUF899, thioredoxin-like YP_003409365.1 KEGG: sma:SAV_795 hypothetical protein YP_003409366.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: sgr:SGR_1623 putative ornithine cyclodeaminase/mu-crystallin family protein YP_003409367.1 PFAM: proline racemase; KEGG: sgr:SGR_1624 putative proline racemase YP_003409368.1 PFAM: amino acid permease-associated region; KEGG: mbn:Mboo_0145 amino acid permease-associated region YP_003409369.1 TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); protein of unknown function DUF472; protein of unknown function DUF471; protein of unknown function DUF470; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: npu:Npun_R5202 lysyl-tRNA synthetase YP_003409370.1 PFAM: protein of unknown function DUF461; KEGG: mjl:Mjls_5127 hypothetical protein YP_003409371.1 KEGG: rop:ROP_29820 hypothetical protein YP_003409372.1 KEGG: mva:Mvan_4767 hypothetical protein YP_003409373.1 PFAM: Luciferase-like, subgroup; KEGG: kra:Krad_3415 luciferase family protein YP_003409374.1 KEGG: rci:RRC32 hypothetical protein YP_003409375.1 PFAM: polysaccharide deacetylase; KEGG: cmi:CMM_1145 putative deacetylase YP_003409376.1 PFAM: Asparaginase/glutaminase; KEGG: rha:RHA1_ro03209 asparaginase YP_003409377.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; FAD- binding 8 domain protein; Ferric reductase domain protein transmembrane component domain; KEGG: ava:Ava_2874 oxidoreductase FAD/NAD(P)- binding YP_003409378.1 PFAM: AMP-dependent synthetase and ligase; KEGG: msm:MSMEG_1982 acyl-CoA synthase YP_003409379.1 PFAM: Nitrile hydratase alpha chain; KEGG: mrd:Mrad2831_0904 nitrile hydratase, alpha subunit YP_003409380.1 KEGG: sgr:SGR_1239 putative gamma- glutamyltranspeptidase; TIGRFAM: gamma-glutamyltransferase; PFAM: gamma-glutamyltranspeptidase YP_003409381.1 KEGG: bcv:Bcav_1602 hypothetical protein YP_003409382.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bcv:Bcav_1601 ABC transporter related YP_003409384.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: sgr:SGR_6158 hypothetical protein YP_003409385.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: bcv:Bcav_1818 bifunctional deaminase- reductase domain protein YP_003409386.1 KEGG: mkm:Mkms_5653 integrase catalytic subunit YP_003409387.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: kra:Krad_4278 EmrB/QacA family drug resistance transporter YP_003409388.1 PFAM: Luciferase-like, subgroup; KEGG: sus:Acid_4376 luciferase family protein YP_003409389.1 KEGG: kra:Krad_0083 hypothetical protein YP_003409390.1 PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: rsa:RSal33209_1824 major facilitator transporter YP_003409391.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: rxy:Rxyl_2705 monooxygenase, FAD-binding protein YP_003409392.1 TIGRFAM: DNA ligase I, ATP-dependent Dnl1; PFAM: ATP dependent DNA ligase; DNA ligase domain protein; ATP dependent DNA ligase domain protein; KEGG: rha:RHA1_ro01648 ATP-dependent DNA ligase YP_003409393.1 TIGRFAM: dihydroxyacetone kinase, phosphotransfer subunit; PFAM: PTS system fructose subfamily IIA component; KEGG: msm:MSMEG_2121 multiphosphoryl transfer protein (MTP) YP_003409394.1 TIGRFAM: dihydroxyacetone kinase, L subunit; PFAM: Dak phosphatase; KEGG: msm:MSMEG_2122 dihydroxyacetone kinase, L subunit YP_003409395.1 KEGG: msm:MSMEG_2123 dihydroxyacetone kinase, DhaK subunit; TIGRFAM: dihydroxyacetone kinase, DhaK subunit; PFAM: Dak kinase YP_003409396.1 KEGG: rop:ROP_43760 hypothetical protein YP_003409398.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: ace:Acel_1832 two component transcriptional regulator YP_003409399.1 KEGG: sen:SACE_0144 putative ABC transporter ATP- binding protein YP_003409400.1 PFAM: SpoOM family protein; KEGG: kra:Krad_0063 SpoOM family protein YP_003409401.1 PFAM: alpha/beta hydrolase fold; KEGG: sen:SACE_1904 alpha/beta hydrolase YP_003409402.1 PFAM: peptidase M50; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: sen:SACE_2437 peptidase M50 YP_003409403.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mva:Mvan_4479 short-chain dehydrogenase/reductase SDR YP_003409404.1 PFAM: alpha/beta hydrolase fold; KEGG: rpf:Rpic12D_4461 alpha/beta hydrolase fold protein YP_003409405.1 PFAM: FAD dependent oxidoreductase; KEGG: sma:SAV_1390 aromatic-ring hydroxylase YP_003409406.1 KEGG: sma:SAV_1389 hypothetical protein YP_003409407.1 KEGG: bcm:Bcenmc03_5849 triple helix repeat- containing collagen YP_003409408.1 KEGG: fre:Franean1_6172 hypothetical protein YP_003409409.1 PFAM: MMPL domain protein; KEGG: sen:SACE_2502 MmpL family integral membrane protein YP_003409410.1 KEGG: scl:sce5032 translation initiation factor IF- 2, chloroplast precursor YP_003409411.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mkm:Mkms_1577 alcohol dehydrogenase YP_003409413.1 KEGG: fre:Franean1_5517 hypothetical protein YP_003409414.1 PFAM: alpha/beta hydrolase fold; KEGG: nfa:nfa16650 putative hydrolase YP_003409415.1 PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: nca:Noca_2244 peptidase M23B YP_003409417.1 PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_70980 putative MFS transporter YP_003409418.1 PFAM: alpha/beta hydrolase fold; KEGG: mjl:Mjls_0026 hypothetical protein YP_003409419.1 PFAM: major facilitator superfamily MFS_1; KEGG: lhk:LHK_00114 permease YP_003409420.1 KEGG: spa:M6_Spy0409 surface antigen YP_003409421.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mva:Mvan_3244 methyltransferase type 11 YP_003409422.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_38360 putative fatty-acid--CoA ligase YP_003409423.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tfu:Tfu_2808 putative acetyl-coenzyme A synthetase YP_003409424.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rop:ROP_30610 acyl-CoA dehydrogenase YP_003409425.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: cef:CE2250 putative superoxide dismutase YP_003409426.1 PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: rha:RHA1_ro00753 poly(3-hydroxyalkanoate) polymerase YP_003409427.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: kra:Krad_3505 acyl-CoA dehydrogenase domain- containing protein YP_003409428.1 TIGRFAM: poly(3-hydroxyalkanoate) depolymerase; PFAM: alpha/beta hydrolase fold; KEGG: ppw:PputW619_0460 poly(3-hydroxyalkanoate) depolymerase YP_003409429.1 TIGRFAM: ubiquinone biosynthesis O- methyltransferase; PFAM: Methyltransferase type 11; methyltransferase small; Methyltransferase type 12; KEGG: rha:RHA1_ro05098 3-demethylubiquinone-9 3-O- methyltransferase YP_003409430.1 PFAM: cytochrome P450; KEGG: sen:SACE_5814 cytochrome P450-like enzyme YP_003409431.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mtb:TBMG_02244 oxidoreductase YP_003409432.1 PFAM: UspA domain protein; KEGG: ach:Achl_0356 UspA domain protein YP_003409433.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: ach:Achl_0355 protein of unknown function DUF112 transmembrane YP_003409434.1 KEGG: ach:Achl_0354 hypothetical protein YP_003409435.1 PFAM: conserved hypothetical protein; KEGG: ach:Achl_0353 hypothetical protein YP_003409436.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: ach:Achl_0352 transcriptional regulator, LysR family YP_003409437.1 TIGRFAM: 5-dehydro-4-deoxyglucarate dehydratase; PFAM: dihydrodipicolinate synthetase; KEGG: ach:Achl_0351 5-dehydro-4-deoxyglucarate dehydratase YP_003409438.1 KEGG: ach:Achl_0349 mandelate racemase/muconate lactonizing protein; TIGRFAM: glucarate dehydratase; PFAM: Mandelate racemase/muconate lactonizing protein YP_003409439.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: ach:Achl_0038 mandelate racemase/muconate lactonizing protein YP_003409440.1 PFAM: Aldehyde Dehydrogenase; KEGG: tfu:Tfu_1706 putative aldehyde dehydrogenase YP_003409441.1 KEGG: sma:SAV_5728 hypothetical protein YP_003409442.1 PFAM: Auxin Efflux Carrier; KEGG: sco:SCO4893 transport integral membrane protein YP_003409443.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: afw:Anae109_1606 FAD linked oxidase domain- containing protein YP_003409444.1 KEGG: kra:Krad_2674 hypothetical protein YP_003409445.1 KEGG: bcv:Bcav_0816 malate/quinone oxidoreductase; TIGRFAM: malate/quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; FAD dependent oxidoreductase YP_003409446.1 PFAM: FAD linked oxidase domain protein; KEGG: azo:azo1027 putative glycolate oxidase subunit GlcD YP_003409448.1 PFAM: transcription factor WhiB; KEGG: ach:Achl_1263 transcription factor WhiB YP_003409449.1 PFAM: transcriptional activator domain; KEGG: rrs:RoseRS_3322 transcriptional activator domain-containing protein YP_003409450.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; KEGG: ace:Acel_1410 ECF subfamily RNA polymerase sigma-24 factor YP_003409451.1 KEGG: cvi:CV_1938 peroxidase YP_003409452.1 KEGG: lch:Lcho_4101 hypothetical protein YP_003409453.1 PFAM: transcriptional activator domain; KEGG: stp:Strop_2507 transcriptional activator domain-containing protein YP_003409455.1 KEGG: cyn:Cyan7425_0061 hypothetical protein YP_003409456.1 PFAM: cytochrome P450; KEGG: fre:Franean1_0598 cytochrome P450 YP_003409457.1 PFAM: Protein of unknown function DUF2183; KEGG: stp:Strop_1700 hypothetical protein YP_003409458.1 PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; KEGG: kra:Krad_0218 cold-shock DNA-binding domain- containing protein YP_003409460.1 KEGG: hne:HNE_2486 thiol-disulfide oxidoreductase domain-containing protein YP_003409461.1 KEGG: hne:HNE_2485 selenoprotein YP_003409462.1 KEGG: hne:HNE_2485 selenoprotein YP_003409463.1 KEGG: sit:TM1040_1746 hypothetical protein YP_003409464.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: chl:Chy400_1585 3-oxoacyl-(acyl-carrier- protein) reductase YP_003409465.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; carboxyl transferase; biotin/lipoyl attachment domain- containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rer:RER_40770 acyl-CoA carboxylase YP_003409466.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; KEGG: dds:Ddes_1613 3-oxoacyl-(acyl-carrier- protein) synthase III YP_003409467.1 PFAM: alpha/beta hydrolase fold; KEGG: nca:Noca_3427 alpha/beta hydrolase fold YP_003409468.1 PFAM: protein of unknown function UCP012608; KEGG: rha:RHA1_ro06724 hypothetical protein YP_003409469.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sma:SAV_961 ECF subfamily RNA polymerase sigma factor YP_003409470.1 PFAM: YCII-related; KEGG: sgr:SGR_6933 hypothetical protein YP_003409471.1 PFAM: Poly-beta-hydroxybutyrate polymerase domain protein; alpha/beta hydrolase fold; KEGG: bur:Bcep18194_B1390 poly-beta-hydroxybutyrate polymerase YP_003409472.1 TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel; KEGG: aca:ACP_0926 large conductance mechanosensitive channel protein YP_003409473.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: nca:Noca_4824 hypothetical protein YP_003409474.1 KEGG: fra:Francci3_0218 putative serine/threonine kinase anti-sigma factor YP_003409475.1 KEGG: mxa:MXAN_1364 hypothetical protein YP_003409476.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: bpt:Bpet0874 IclR family transcriptional regulator YP_003409477.1 TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: kra:Krad_0201 2-dehydro-3- deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase YP_003409478.1 PFAM: FMN-dependent alpha-hydroxy acid dehydrogenase; KEGG: sen:SACE_4311 L-lactate dehydrogenase YP_003409479.1 KEGG: sen:SACE_4310 hypothetical protein YP_003409480.1 PFAM: PfkB domain protein; KEGG: ttj:TTHB079 2-keto-3-deoxy-gluconate kinase YP_003409481.1 PFAM: dihydrodipicolinate synthetase; KEGG: sus:Acid_2446 dihydrodipicolinate synthetase YP_003409482.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: tpd:Teth39_1970 D-isomer specific 2- hydroxyacid dehydrogenase, NAD-binding YP_003409483.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: bcv:Bcav_2984 short-chain dehydrogenase/reductase SDR YP_003409484.1 PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; KEGG: bcv:Bcav_0196 dihydroxy-acid dehydratase YP_003409485.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: mta:Moth_0417 IclR family transcriptional regulator YP_003409486.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: rop:ROP_27320 fumarylacetoacetate hydrolase family protein YP_003409487.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: bcv:Bcav_0197 alcohol dehydrogenase GroES domain protein YP_003409488.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_0496 3-oxoacyl-[acyl-carrier protein] reductase YP_003409489.1 PFAM: peptidase M19 renal dipeptidase; KEGG: sen:SACE_4049 membrane dipeptidase YP_003409490.1 PFAM: LytTr DNA-binding region; KEGG: msm:MSMEG_3730 helix-turn-helix, fis-type, putative YP_003409491.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sen:SACE_6562 glutathione-independent formaldehyde dehydrogenase YP_003409492.1 KEGG: sen:SACE_4450 hypothetical protein YP_003409493.1 KEGG: sen:SACE_4449 quinoprotein ethanol dehydrogenase precursor; TIGRFAM: PQQ-dependent dehydrogenase, methanol/ethanol family; PFAM: PQQ-dependent enzyme-like; Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone beta-propeller repeat YP_003409494.1 TIGRFAM: coenzyme PQQ biosynthesis protein A; PFAM: coenzyme PQQ biosynthesis protein A YP_003409495.1 KEGG: msm:MSMEG_3724 pyrroloquinoline quinone biosynthesis protein PqqB YP_003409496.1 KEGG: sen:SACE_4446 pyrroloquinoline quinone biosynthesis protein PqqC; TIGRFAM: coenzyme PQQ biosynthesis protein C; PFAM: TENA/THI-4 domain protein YP_003409497.1 PFAM: coenzyme PQQ synthesis D; KEGG: sen:SACE_4424 hypothetical protein YP_003409498.1 KEGG: sen:SACE_4425 pyrroloquinoline quinone biosynthesis protein PqqE; TIGRFAM: coenzyme PQQ biosynthesis protein E; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003409499.1 PFAM: sodium/calcium exchanger membrane region; KEGG: sen:SACE_4445 K+-dependent Na+/Ca+ exchanger related-protein YP_003409500.1 PFAM: protein of unknown function DUF1232; KEGG: msm:MSMEG_5602 hypothetical protein YP_003409501.1 PFAM: protein of unknown function DUF336; KEGG: tfu:Tfu_3026 hypothetical protein YP_003409502.1 PFAM: amino acid permease-associated region; KEGG: afl:Aflv_1244 amino acid transporter YP_003409503.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short- chain dehydrogenase/reductase SDR; dTDP-4-dehydrorhamnose reductase; KEGG: kra:Krad_1680 NAD-dependent epimerase/dehydratase YP_003409504.1 PFAM: AMP-dependent synthetase and ligase; alpha/beta hydrolase fold; KEGG: cms:CMS_1847 putative AMP-dependent synthetase/ligase YP_003409505.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III; KEGG: ach:Achl_0446 3-oxoacyl-(acyl-carrier-protein (ACP)) synthase III domain protein YP_003409506.1 KEGG: SNF2 superfamily protein YP_003409508.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: fal:FRAAL3720 putative integrase YP_003409509.1 KEGG: sen:SACE_2949 hypothetical protein YP_003409510.1 KEGG: rer:RER_02560 hypothetical protein YP_003409511.1 KEGG: kra:Krad_4493 hypothetical protein YP_003409512.1 PFAM: HpcH/HpaI aldolase; KEGG: sen:SACE_4556 HpcH/HpaI aldolase YP_003409513.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: kra:Krad_1513 D-3-phosphoglycerate dehydrogenase YP_003409514.1 TIGRFAM: alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rha:RHA1_ro11235 carboxymuconolactone decarboxylase YP_003409516.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: bcv:Bcav_0683 glycerophosphoryl diester phosphodiesterase YP_003409517.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sus:Acid_6576 amidohydrolase YP_003409518.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_3503 hypothetical protein YP_003409519.1 PFAM: NMT1/THI5 like domain protein; KEGG: aau:AAur_pTC10256 putative extracellular solute-binding protein YP_003409520.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: art:Arth_3082 binding-protein-dependent transport systems inner membrane component YP_003409521.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aau:AAur_pTC10248 putative ABC transporter YP_003409522.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aau:AAur_pTC10247 putative ABC transporter, ATP-binding protein YP_003409523.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: sen:SACE_1934 putative RNA polymerase sigma factor YP_003409524.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV_1330 hypothetical protein YP_003409526.1 PFAM: Carotenoid oxygenase; KEGG: sco:SCO0333 dioxygenase (secreted protein) YP_003409527.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: fal:FRAAL4359 transcriptional regulator YP_003409528.1 PFAM: transcriptional activator domain; KEGG: sma:SAV_400 transcriptional regulator YP_003409530.1 KEGG: bth:BT_2343 hypothetical protein YP_003409531.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: stp:Strop_1703 peptidase M14, carboxypeptidase A YP_003409532.1 PFAM: Patatin; KEGG: stp:Strop_3682 patatin YP_003409533.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: nca:Noca_0015 phospholipid/glycerol acyltransferase YP_003409534.1 PFAM: GYD family protein; KEGG: rle:RL2480 hypothetical protein YP_003409535.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; peptidase S15; KEGG: sen:SACE_0253 peptidase S9, prolyl oligopeptidase active site region YP_003409536.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: smd:Smed_4755 putative ribonuclease BN YP_003409537.1 PFAM: cytochrome P450; KEGG: mjl:Mjls_0420 cytochrome P450 YP_003409538.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: saq:Sare_4661 peptidase S8 and S53 subtilisin kexin sedolisin YP_003409539.1 TIGRFAM: luciferase family oxidoreductase, group 1; PFAM: Luciferase-like, subgroup; KEGG: rer:RER_17360 hypothetical protein YP_003409540.1 KEGG: ace:Acel_0084 hypothetical protein YP_003409541.1 PFAM: Animal haem peroxidase; KEGG: fre:Franean1_2669 heme peroxidase YP_003409542.1 KEGG: reu:Reut_A1745 hypothetical protein YP_003409544.1 KEGG: bja:blr3997 hypothetical protein YP_003409545.1 KEGG: cmi:CMM_2284 hypothetical protein YP_003409546.1 KEGG: gvi:gll1663 metalloprotease MEP1-like protein YP_003409548.1 PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A; KEGG: bba:Bd3234 carboxypeptidase T precursor YP_003409550.1 KEGG: amr:AM1_5021 hypothetical protein YP_003409551.1 KEGG: cvi:CV_2831 hypothetical protein YP_003409552.1 PFAM: SNARE associated Golgi protein; KEGG: scl:sce5352 hypothetical protein YP_003409554.1 KEGG: rec:RHECIAT_PB0000011 hypothetical protein YP_003409555.1 KEGG: saq:Sare_2656 hypothetical protein YP_003409556.1 KEGG: gau:GAU_3161 alcohol dehydrogenase YP_003409557.1 KEGG: mav:MAV_0134 hypothetical protein YP_003409558.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: gur:Gura_3580 antibiotic biosynthesis monooxygenase YP_003409559.1 KEGG: sco:SCO5944 hypothetical protein YP_003409560.1 PFAM: protein of unknown function DUF849; KEGG: met:M446_1737 hypothetical protein YP_003409562.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: lch:Lcho_0718 dimethylmenaquinone methyltransferase YP_003409563.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rxy:Rxyl_1748 short chain enoyl-CoA hydratase YP_003409564.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: sde:Sde_0644 hypothetical protein YP_003409565.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; KEGG: nca:Noca_3713 NAD-dependent epimerase/dehydratase YP_003409566.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rha:RHA1_ro02365 major facilitator superfamily sugar transporter YP_003409567.1 PFAM: regulatory protein MerR; transcription activator effector binding; SMART: regulatory protein MerR; KEGG: kra:Krad_2735 MerR family transcriptional regulator YP_003409568.1 KEGG: kra:Krad_2734 hypothetical protein YP_003409569.1 KEGG: kra:Krad_2730 hypothetical protein YP_003409571.1 KEGG: sma:SAV_1122 hypothetical protein YP_003409572.1 PFAM: beta-lactamase; KEGG: rha:RHA1_ro04143 penicillin-binding protein YP_003409573.1 PFAM: beta-lactamase; KEGG: aau:AAur_2637 putative beta-lactamase family protein YP_003409574.1 PFAM: peptidase S13 D-Ala-D-Ala carboxypeptidase C; KEGG: rer:RER_26680 D-alanyl-D-alanine carboxypeptidase YP_003409575.1 PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: fal:FRAAL0824 putative two-component system sensor kinase YP_003409576.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sma:SAV_4878 two-component system response regulator YP_003409578.1 KEGG: mta:Moth_1796 phage integrase YP_003409580.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: fra:Francci3_1450 cobyrinic acid a,c-diamide synthase YP_003409581.1 KEGG: mva:Mvan_5988 hypothetical protein YP_003409582.1 PFAM: helicase domain protein; SNF2-related protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: nca:Noca_1675 helicase domain-containing protein YP_003409584.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: fra:Francci3_3042 acyl-CoA dehydrogenase-like YP_003409585.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sma:SAV_7158 regulator of sigma factor YP_003409587.1 PFAM: Radical SAM domain protein; KEGG: mbt:JTY_3156 putative pyruvate formate lyase activating protein YP_003409588.1 PFAM: protein of unknown function DUF52; KEGG: hha:Hhal_1871 hypothetical protein YP_003409589.1 KEGG: rer:RER_06070 hypothetical protein YP_003409590.1 PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_49010 drug resistance efflux protein YP_003409591.1 KEGG: rsp:RSP_2266 pseudouridine synthase YP_003409592.1 PFAM: CsbD family protein; KEGG: art:Arth_3578 CsbD family protein YP_003409594.1 KEGG: saq:Sare_1132 hypothetical protein YP_003409595.1 PFAM: FAD linked oxidase domain protein; D- arabinono-14-lactone oxidase; KEGG: cmi:CMM_2110 putative sugar alcohol dehydrogenase YP_003409596.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase; KEGG: tau:Tola_0290 sugar-phosphate isomerase, RpiB/LacA/LacB family YP_003409597.1 PFAM: PemK family protein; KEGG: mtc:MT1992 hypothetical protein YP_003409598.1 KEGG: mbt:JTY_1966 hypothetical protein YP_003409599.1 PFAM: transcriptional activator domain; transcriptional regulator domain protein; KEGG: mva:Mvan_2284 transcriptional regulator YP_003409600.1 PFAM: thioesterase superfamily protein; KEGG: rop:ROP_11140 hypothetical protein YP_003409601.1 KEGG: rop:ROP_01680 hypothetical protein YP_003409603.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: bcv:Bcav_0922 transcriptional regulator, LuxR family YP_003409604.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; HI0933 family protein; KEGG: bcv:Bcav_0923 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003409605.1 KEGG: sen:SACE_0308 hypothetical protein YP_003409606.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: bcv:Bcav_0264 NAD-dependent epimerase/dehydratase YP_003409607.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: stp:Strop_2055 monooxygenase, FAD-binding YP_003409608.1 KEGG: mpt:Mpe_A0746 hypothetical protein YP_003409609.1 PFAM: regulatory protein TetR; KEGG: msm:MSMEG_1700 TetR-family protein transcriptional regulator YP_003409612.1 KEGG: cef:CE1676 hypothetical protein YP_003409613.1 PFAM: Integrase catalytic region; KEGG: mgi:Mflv_3195 integrase catalytic subunit YP_003409614.1 PFAM: transposase IS3/IS911 family protein; KEGG: mlu:Mlut_10240 transposase YP_003409615.1 PFAM: protein of unknown function DUF849; KEGG: dac:Daci_4256 hypothetical protein YP_003409616.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rha:RHA1_ro10031 transposase YP_003409617.1 KEGG: rha:RHA1_ro10149 transposase YP_003409618.1 KEGG: bgl:bglu_4p0040 putative TIS1421-transposase orfA protein YP_003409619.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO7812 insertion element transposase YP_003409620.1 KEGG: sen:SACE_4970 transposase YP_003409621.1 KEGG: maq:Maqu_0609 transposase YP_003409622.1 PFAM: NAD-glutamate dehydrogenase; KEGG: rxy:Rxyl_2529 glutamate dehydrogenase (NAD) YP_003409623.1 PFAM: Inorganic pyrophosphatase; KEGG: deb:DehaBAV1_0349 inorganic diphosphatase YP_003409624.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: ace:Acel_1975 anti-sigma-factor antagonist YP_003409627.1 KEGG: hypothetical protein LOC100091385 YP_003409629.1 PFAM: protein of unknown function DUF1458; KEGG: nth:Nther_1660 protein of unknown function DUF1458 YP_003409630.1 KEGG: mva:Mvan_0649 hypothetical protein YP_003409631.1 KEGG: kra:Krad_1970 hypothetical protein YP_003409632.1 PFAM: Capsule synthesis protein, CapA; KEGG: nca:Noca_3638 putative enzyme of poly-gamma- glutamate biosynthesis (capsule formation) YP_003409633.1 KEGG: aav:Aave_3790 transposase, IS4 family protein YP_003409634.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro06688 hydrolase YP_003409635.1 PFAM: Acetoacetate decarboxylase; KEGG: scl:sce6606 hypothetical protein YP_003409637.1 KEGG: nfa:nfa27370 hypothetical protein YP_003409638.1 PFAM: transposase IS3/IS911 family protein; KEGG: mlu:Mlut_18320 hypothetical protein YP_003409639.1 PFAM: Integrase catalytic region; KEGG: mlu:Mlut_18330 integrase family protein YP_003409640.1 PFAM: glycoside hydrolase family 14; KEGG: cbi:CLJ_B1243 beta-amylase YP_003409641.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; KEGG: tbd:Tbd_0507 serine protease YP_003409642.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: mav:MAV_4319 transposase, mutator family protein YP_003409644.1 PFAM: integrase family protein; KEGG: sen:SACE_5083 hypothetical protein YP_003409646.1 KEGG: sen:SACE_3876 hypothetical protein YP_003409647.1 PFAM: inner-membrane translocator; KEGG: sub:SUB1308 ribose transport system permease protein RbsC YP_003409648.1 PFAM: inner-membrane translocator; KEGG: rlg:Rleg_1398 inner-membrane translocator YP_003409649.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: aha:AHA_2310 D-ribose transporter ATP binding protein YP_003409650.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cpo:COPRO5265_1464 D-ribose-binding periplasmic protein YP_003409652.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: sco:SCO0806 LacI family transcriptional regulator YP_003409653.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: stp:Strop_2159 hypothetical protein YP_003409654.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: tfu:Tfu_0029 LysR family transcriptional regulator YP_003409655.1 TIGRFAM: aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; KEGG: pfl:PFL_2830 aspartate racemase YP_003409656.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: sma:SAV_1367 dehydrogenase YP_003409657.1 SMART: Ribosomal RNA adenine methylase transferase- like; KEGG: rxy:Rxyl_0287 methyltransferase type 11 YP_003409658.1 PFAM: Glycosyltransferase 28 domain; UDP- glucuronosyl/UDP-glucosyltransferase; KEGG: bcv:Bcav_1381 glycosyltransferase, MGT family YP_003409659.1 PFAM: regulatory protein TetR; KEGG: fre:Franean1_6247 regulatory protein, TetR YP_003409660.1 KEGG: rha:RHA1_ro00889 hypothetical protein YP_003409661.1 KEGG: bcv:Bcav_0509 PT repeat family protein YP_003409662.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bcv:Bcav_0663 TAP domain protein YP_003409663.1 KEGG: sen:SACE_0134 hypothetical protein YP_003409664.1 KEGG: fal:FRAAL2853 putative exodeoxyribonuclease V YP_003409665.1 PFAM: aldo/keto reductase; KEGG: stp:Strop_2162 aldo/keto reductase YP_003409666.1 KEGG: sco:SCO1326 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_003409667.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro06422 hydrolase YP_003409668.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: rha:RHA1_ro06421 hypothetical protein YP_003409669.1 PFAM: Phosphoglycerate mutase; KEGG: kra:Krad_1833 phosphoglycerate mutase YP_003409670.1 KEGG: nfa:nfa29320 hypothetical protein YP_003409671.1 KEGG: ace:Acel_1171 hypothetical protein YP_003409672.1 KEGG: bcv:Bcav_1825 hypothetical protein YP_003409673.1 PFAM: protein of unknown function DUF1503; KEGG: nca:Noca_2467 hypothetical protein YP_003409674.1 KEGG: rer:RER_31960 cysteine--1D-myo-inosityl 2- amino-2-deoxy-alpha-D-glucopyranoside ligase MshC; TIGRFAM: cysteine/1-D-myo-inosityl 2-amino-2-deoxy- alpha-D-glucopyranoside ligase; PFAM: Cysteinyl-tRNA synthetase class Ia YP_003409675.1 KEGG: chy:CHY_0453 deoxyguanosinetriphosphate triphosphohydrolase-like protein; TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003409676.1 PFAM: protein of unknown function DUF75; KEGG: sen:SACE_2233 hypothetical protein YP_003409677.1 TIGRFAM: methionine synthase; PFAM: homocysteine S-methyltransferase; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; dihydropteroate synthase DHPS; Vitamin B12 dependent methionine synthase activation region; KEGG: msm:MSMEG_4185 B12-dependent methionine synthase YP_003409678.1 KEGG: bcv:Bcav_1343 RDD domain containing protein YP_003409679.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: saq:Sare_2349 HAD family hydrolase YP_003409680.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: saq:Sare_4704 amidohydrolase YP_003409681.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0191 N-acetylglutamate synthase and related acetyltransferase YP_003409682.1 KEGG: stp:Strop_2236 hypothetical protein YP_003409683.1 PFAM: tRNA methyltransferase complex GCD14 subunit; KEGG: nfa:nfa31820 hypothetical protein YP_003409684.1 PFAM: AAA ATPase central domain protein; SMART: AAA ATPase; KEGG: stp:Strop_2241 ATPase central domain- containing protein YP_003409685.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: stp:Strop_2242 hypothetical protein YP_003409686.1 PFAM: protein of unknown function DUF797; KEGG: saq:Sare_2360 hypothetical protein YP_003409687.1 PFAM: 20S proteasome A and B subunits; KEGG: saq:Sare_2361 20S proteasome A and B subunits YP_003409688.1 PFAM: 20S proteasome A and B subunits; KEGG: sen:SACE_2252 20S proteasome alpha-subunit YP_003409689.1 PFAM: protein of unknown function DUF245 domain protein; protein of unknown function DUF275 domain protein; KEGG: saq:Sare_2364 hypothetical protein YP_003409690.1 KEGG: tfu:Tfu_1772 hypothetical protein YP_003409691.1 KEGG: stp:Strop_2249 hypothetical protein YP_003409692.1 KEGG: sen:SACE_2260 transcriptional regulator-like protein YP_003409694.1 PFAM: sec-independent translocation protein mttA/Hcf106; KEGG: fra:Francci3_2607 twin arginine-targeting protein translocase YP_003409695.1 TIGRFAM: Sec-independent protein translocase, TatC subunit; PFAM: Sec-independent periplasmic protein translocase; KEGG: rha:RHA1_ro00836 sec-independent protein translocase transmembrane protein YP_003409696.1 PFAM: DEAD/DEAH box helicase domain protein; DSH domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: saq:Sare_2374 DEAD/DEAH box helicase domain- containing protein YP_003409697.1 KEGG: rop:ROP_05720 hypothetical membrane protein YP_003409698.1 PFAM: 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2; KEGG: kra:Krad_1887 5'-3' exonuclease YP_003409699.1 PFAM: peptidase M24; creatinase; KEGG: sen:SACE_2279 Xaa-Pro dipeptidase YP_003409700.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: sen:SACE_2280 AsnC family transcriptional regulator YP_003409701.1 SMART: Hedgehog/intein hint domain protein; KEGG: bcv:Bcav_2004 radical SAM domain protein YP_003409703.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: nca:Noca_3311 uncharacterized enzyme YP_003409704.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: sma:SAV_1485 1-acylglycerol-3-phosphate O- acyltransferase YP_003409705.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cmi:CMM_2205 putative acetyltransferase YP_003409706.1 PFAM: Amidohydrolase 3; KEGG: sgr:SGR_6108 hypothetical protein YP_003409707.1 TIGRFAM: apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: kra:Krad_1890 apolipoprotein N- acyltransferase YP_003409708.1 PFAM: glycosyl transferase family 2; KEGG: sma:SAV_6923 glycosyl transferase YP_003409709.1 PFAM: FxsA cytoplasmic membrane protein; KEGG: sen:SACE_2285 FxsA cytoplasmic membrane protein YP_003409710.1 KEGG: saq:Sare_2391 hypothetical protein YP_003409711.1 PFAM: thymidine kinase; KEGG: stp:Strop_2343 thymidine kinase YP_003409712.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO1420 integral membrane protein YP_003409713.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: sgr:SGR_6113 putative phosphodiesterase YP_003409714.1 KEGG: sen:SACE_2293 hypothetical protein YP_003409716.1 PFAM: PilT protein domain protein; KEGG: spe:Spro_1038 PilT domain-containing protein YP_003409717.1 KEGG: npu:Npun_R6080 hypothetical protein YP_003409718.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sco:SCO0304 hypothetical protein YP_003409719.1 KEGG: nca:Noca_2684 hypothetical protein YP_003409720.1 PFAM: glycoside hydrolase family 65 central catalytic; glycoside hydrolase family 65 domain protein; KEGG: rop:ROP_54720 putative glycosidase YP_003409721.1 TIGRFAM: beta-phosphoglucomutase family hydrolase; HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: saq:Sare_0524 beta-phosphoglucomutase family hydrolase YP_003409722.1 PFAM: PEBP family protein; KEGG: mmi:MMAR_3122 hypothetical protein YP_003409723.1 KEGG: mgi:Mflv_0952 beta-lactamase YP_003409724.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sma:SAV_5596 acetyltransferase YP_003409725.1 TIGRFAM: pantothenate kinase; KEGG: mxa:MXAN_2325 pantothenate kinase YP_003409726.1 KEGG: sen:SACE_3842 glycine dehydrogenase; TIGRFAM: glycine dehydrogenase; PFAM: Glycine cleavage system P-protein-like YP_003409727.1 SMART: regulatory protein MerR; KEGG: mab:MAB_2406 putative HTH-type transcriptional regulator YP_003409728.1 PFAM: protein of unknown function DUF151; KEGG: sen:SACE_3844 hypothetical protein YP_003409729.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: ace:Acel_1225 MerR family transcriptional regulator YP_003409730.1 PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: tfu:Tfu_1395 forkhead-associated YP_003409731.1 TIGRFAM: glycine cleavage system H protein; PFAM: glycine cleavage H-protein; KEGG: saq:Sare_2521 glycine cleavage system H protein YP_003409732.1 PFAM: protein of unknown function DUF881; KEGG: sgr:SGR_6144 hypothetical protein YP_003409733.1 PFAM: protein of unknown function DUF1290; KEGG: sma:SAV_6979 hypothetical protein YP_003409734.1 PFAM: protein of unknown function DUF881; KEGG: stp:Strop_2386 hypothetical protein YP_003409735.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sen:SACE_3847 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase YP_003409736.1 TIGRFAM: small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: ace:Acel_1356 elongation factor G YP_003409737.1 PFAM: Domain of unknown function DUF1918; KEGG: fra:Francci3_4452 hypothetical protein YP_003409739.1 KEGG: bpa:BPP4021 ABC transporter ATP-binding protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase YP_003409740.1 KEGG: gme:Gmet_2634 ABC transporter-related protein; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydD; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_003409741.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: dge:Dgeo_2704 cytochrome d ubiquinol oxidase, subunit II YP_003409742.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: dge:Dgeo_2705 cytochrome bd ubiquinol oxidase, subunit I YP_003409744.1 PFAM: UbiC transcription regulator-associated domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: mva:Mvan_4015 UbiC transcription regulator- associated domain-containing protein YP_003409745.1 PFAM: PfkB domain protein; KEGG: rop:ROP_10660 putative 5-dehydro-2- deoxygluconokinase YP_003409746.1 KEGG: rop:ROP_10670 hypothetical protein YP_003409747.1 PFAM: Myo-inositol catabolism IolB domain protein; KEGG: rop:ROP_10680 5-deoxy-glucuronate isomerase YP_003409748.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: rop:ROP_10690 3D-(3,5/4)- trihydroxycyclohexane-1,2-dione hydrolase YP_003409749.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rer:RER_20170 2-keto-myo-inositol dehydratase IolE YP_003409750.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rha:RHA1_ro01355 oxidoreductase YP_003409751.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sen:SACE_2905 myo-inositol catabolism protein YP_003409752.1 TIGRFAM: methylmalonate-semialdehyde dehydrogenase; PFAM: Aldehyde Dehydrogenase; KEGG: rop:ROP_05260 methylmalonate-semialdehyde dehydrogenase YP_003409753.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: kra:Krad_0581 alanine racemase YP_003409754.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: rpc:RPC_1041 DeoR family transcriptional regulator YP_003409755.1 KEGG: bch:Bcen2424_0172 transposase and inactivated derivatives-like protein YP_003409756.1 TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: rop:ROP_10780 sugar transporter YP_003409757.1 KEGG: sma:SAV_7431 integral membrane protein YP_003409758.1 PFAM: 4-oxalocrotonate tautomerase; KEGG: esi:Exig_0529 4-oxalocrotonate tautomerase YP_003409759.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: rha:RHA1_ro05268 hydroxypyruvate isomerase YP_003409760.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: rop:ROP_53120 putative myo-inositol 2- dehydrogenase YP_003409761.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rer:RER_20330 LacI family transcriptional regulator YP_003409762.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; cytochrome P450; KEGG: vap:Vapar_3596 ferredoxin YP_003409763.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI; KEGG: rop:ROP_52910 putative LacI family transcriptional regulator YP_003409764.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sen:SACE_2908 dehydrogenase, putative myo- inositol 2-dehydrogenase YP_003409765.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sen:SACE_2907 sugar phosphate isomerase/epimerase YP_003409766.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: msm:MSMEG_4652 D-oliose 4-ketoreductase YP_003409767.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sen:SACE_4657 myo-inositol 2-dehydrogenase YP_003409768.1 SMART: regulatory protein LacI; KEGG: sma:SAV_7191 DNA-binding protein YP_003409769.1 PFAM: aldo/keto reductase; KEGG: sgr:SGR_1126 putative oxidoreductase YP_003409770.1 PFAM: Phytanoyl-CoA dioxygenase; KEGG: ace:Acel_1813 phytanoyl-CoA dioxygenase YP_003409771.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6259 sugar ABC transporter ATP-binding protein YP_003409772.1 PFAM: inner-membrane translocator; KEGG: kra:Krad_4053 inner-membrane translocator YP_003409773.1 KEGG: rop:ROP_05200 putative ABC transporter substrate-binding protein YP_003409774.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sco:SCO6988 oxidoreductase YP_003409775.1 KEGG: sen:SACE_5385 hypothetical protein YP_003409776.1 KEGG: fjo:Fjoh_2819 hypothetical protein YP_003409777.1 PFAM: lipolytic protein G-D-S-L family; KEGG: sma:SAV_1075 secreted protein YP_003409778.1 PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase; KEGG: lxx:Lxx08670 DNA polymerase I YP_003409779.1 PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; KEGG: ara:Arad_4864 hypothetical protein YP_003409780.1 PFAM: PilT protein domain protein; KEGG: mbt:JTY_2767 hypothetical protein YP_003409781.1 KEGG: mtb:TBMG_03981 hypothetical protein YP_003409782.1 KEGG: sco:SCO6167 proline rich protein membrane protein YP_003409783.1 KEGG: saq:Sare_0065 Zn-dependent hydrolase of the beta-lactamase fold-like protein YP_003409784.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: acr:Acry_2577 acyl-CoA dehydrogenase domain- containing protein YP_003409786.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: kra:Krad_4205 mannitol dehydrogenase domain- containing protein YP_003409787.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: kra:Krad_4206 HAD family hydrolase YP_003409788.1 KEGG: kra:Krad_4493 hypothetical protein YP_003409790.1 TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase; KEGG: cyn:Cyan7425_4133 ATPase, P-type (transporting), HAD superfamily, subfamily IC YP_003409791.1 KEGG: kra:Krad_3390 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: GGDEF domain containing protein; PAS domain containing protein YP_003409792.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: kra:Krad_0300 mannitol dehydrogenase domain- containing protein YP_003409793.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: bcv:Bcav_0785 ABC transporter related YP_003409794.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sen:SACE_0927 zinc-binding dehydrogenase YP_003409795.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_6355 sugar ABC transporter permease protein YP_003409796.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_0302 binding-protein-dependent transport systems inner membrane component YP_003409797.1 PFAM: extracellular solute-binding protein family 1; KEGG: sco:SCO1898 substrate binding protein YP_003409798.1 PFAM: putative sugar-binding domain protein; KEGG: sco:SCO1463 transcriptional regulator YP_003409799.1 PFAM: aminoglycoside phosphotransferase; KEGG: sgr:SGR_3981 hypothetical protein YP_003409800.1 PFAM: phosphofructokinase; KEGG: fra:Francci3_2843 diphosphate--fructose-6- phosphate 1-phosphotransferase YP_003409801.1 PFAM: sodium/hydrogen exchanger; KEGG: mjl:Mjls_2892 sodium/hydrogen exchanger YP_003409802.1 PFAM: TrkA-C domain protein; KEGG: mbt:JTY_3262 hypothetical protein YP_003409803.1 PFAM: UspA domain protein; KEGG: sen:SACE_7258 UspA domain-containing protein YP_003409804.1 PFAM: regulatory protein MarR; transcriptional regulator PadR family protein; Penicillinase repressor; SMART: regulatory protein MarR; KEGG: kra:Krad_3738 MarR family transcriptional regulator YP_003409805.1 KEGG: sen:SACE_3300 hypothetical protein YP_003409806.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: sco:SCO0150 hypothetical protein YP_003409807.1 SMART: helix-turn-helix domain protein; KEGG: art:Arth_0924 XRE family transcriptional regulator YP_003409808.1 KEGG: bcv:Bcav_0034 transmembrane transport protein YP_003409809.1 TIGRFAM: ornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: cmi:CMM_0630 putative ornithine aminotransferase YP_003409810.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: msm:MSMEG_1415 AsnC-family protein transcriptional regulator YP_003409811.1 PFAM: NLPA lipoprotein; KEGG: sco:SCO1557 lipoprotein YP_003409812.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE1468 putative ABC transport integral membrane subunit YP_003409813.1 PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase; KEGG: tfu:Tfu_0931 ABC-type metal ion transport system ATPase component YP_003409814.1 PFAM: Lipoprotein LpqB, GerMN domain; KEGG: kra:Krad_2110 hypothetical protein YP_003409815.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: kra:Krad_2109 integral membrane sensor signal transduction histidine kinase YP_003409816.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: nfa:nfa27150 putative two-component system response regulator YP_003409817.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: kra:Krad_2107 anti-sigma-factor antagonist YP_003409818.1 KEGG: rsa:RSal33209_0451 hypothetical protein YP_003409820.1 KEGG: car:cauri_2024 putative secreted protein YP_003409821.1 TIGRFAM: helicase, RecD/TraA family; KEGG: fra:Francci3_1552 helicase RecD/TraA YP_003409822.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: bcv:Bcav_4180 single-strand binding protein YP_003409823.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_0785 major facilitator superfamily multidrug transporter YP_003409824.1 PFAM: regulatory protein TetR; KEGG: nca:Noca_2098 TetR family transcriptional regulator YP_003409825.1 PFAM: regulatory protein IclR; Transcriptional regulator IclR; SMART: regulatory protein IclR; KEGG: sen:SACE_2823 IclR family transcriptional regulator YP_003409826.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: aau:AAur_2255 vanillate O-demethylase oxygenase subunit B YP_003409827.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: cef:CE0634 putative vanillate O-demethylase oxygenase subunit A YP_003409828.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_1541 major facilitator transporter YP_003409829.1 PFAM: Aldehyde Dehydrogenase; KEGG: cag:Cagg_2534 succinic semialdehyde dehydrogenase YP_003409830.1 PFAM: thioesterase superfamily protein; KEGG: psa:PST_3573 cytosolic long-chain acyl-CoA thioester hydrolase family protein YP_003409831.1 TIGRFAM: aconitate hydratase 1; PFAM: aconitate hydratase domain protein; KEGG: sen:SACE_3811 aconitate hydratase YP_003409832.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: kra:Krad_2490 GntR family transcriptional regulator YP_003409833.1 PFAM: Protein of unknown function, PGPGW, transmembrane; KEGG: sco:SCO0502 hypothetical protein YP_003409834.1 PFAM: polysaccharide deacetylase; KEGG: xau:Xaut_3117 polysaccharide deacetylase YP_003409835.1 KEGG: fra:Francci3_2988 peptidoglycan binding domain-containing protein YP_003409836.1 KEGG: mjl:Mjls_3218 wyosine base formation YP_003409837.1 PFAM: amidohydrolase 2; KEGG: rop:ROP_51830 putative hydrolase YP_003409838.1 KEGG: rxy:Rxyl_2840 uracil-xanthine permease YP_003409839.1 KEGG: msm:MSMEG_1296 uricase; TIGRFAM: urate oxidase; PFAM: Uricase YP_003409840.1 PFAM: Allantoicase region; KEGG: rop:ROP_44360 allantoicase YP_003409841.1 TIGRFAM: allantoinase; PFAM: amidohydrolase; Amidohydrolase 3; KEGG: sen:SACE_6727 allantoinase YP_003409842.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: sen:SACE_6731 xylose isomerase domain- containing protein YP_003409843.1 KEGG: rha:RHA1_ro02577 hypothetical protein YP_003409844.1 PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sen:SACE_1909 GntR family transcriptional regulator YP_003409845.1 KEGG: mpa:MAP2535 hypothetical protein YP_003409846.1 PFAM: Gluconate transporter; KEGG: rop:ROP_49970 gluconate permease YP_003409847.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: pde:Pden_1187 mandelate racemase/muconate lactonizing protein YP_003409848.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: smd:Smed_4887 NADH:flavin oxidoreductase/NADH oxidase YP_003409849.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rop:ROP_36590 putative GntR family transcriptional regulator YP_003409850.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: rxy:Rxyl_0757 choline/carnitine/betaine transport YP_003409851.1 KEGG: rxy:Rxyl_1559 peptidase M24 YP_003409852.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: art:Arth_3714 Rieske (2Fe-2S) domain- containing protein YP_003409853.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: sen:SACE_2776 IclR family transcriptional regulator YP_003409854.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: bph:Bphy_3295 oxidoreductase FAD-binding subunit YP_003409855.1 KEGG: cef:CE1955 hypothetical protein YP_003409856.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: sma:SAV_908 dehydrogenase YP_003409857.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; KEGG: sma:SAV_909 ECF subfamily RNA polymerase sigma factor YP_003409859.1 PFAM: zinc finger DksA/TraR C4-type; KEGG: nca:Noca_0648 putative DnaK suppressor protein YP_003409860.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bcv:Bcav_0628 anti-sigma-factor antagonist YP_003409861.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: fre:Franean1_2024 alpha/beta hydrolase fold YP_003409862.1 PFAM: regulatory protein LuxR; Tetratricopeptide TPR_4; SMART: regulatory protein LuxR; KEGG: msm:MSMEG_4430 transcriptional regulator YP_003409863.1 KEGG: fal:FRAAL4512 putative glycosyl transferase YP_003409865.1 KEGG: nca:Noca_4866 CdaR family transcriptional regulator YP_003409867.1 KEGG: art:Arth_1972 phosphoenolpyruvate synthase; TIGRFAM: phosphoenolpyruvate synthase; PFAM: pyruvate phosphate dikinase PEP/pyruvate- binding; PEP-utilising protein mobile region; PEP- utilizing protein YP_003409868.1 PFAM: protein of unknown function DUF299; KEGG: ach:Achl_0122 protein of unknown function DUF299 YP_003409869.1 TIGRFAM: para-aminobenzoate synthase, subunit I; PFAM: Chorismate binding-like; aminotransferase class IV; KEGG: afw:Anae109_1629 para-aminobenzoate synthase, subunit I YP_003409870.1 TIGRFAM: FolC bifunctional protein; PFAM: Mur ligase middle domain protein; KEGG: mta:Moth_0533 FolC bifunctional protein YP_003409871.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid- binding ACT domain protein; KEGG: rop:ROP_14950 formyltetrahydrofolate deformylase YP_003409872.1 KEGG: sen:SACE_4501 L-serine dehydratase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003409873.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sen:SACE_4500 GntR family transcriptional regulator YP_003409874.1 KEGG: sen:SACE_4499 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003409875.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: sen:SACE_4498 putative methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase YP_003409876.1 PFAM: Formiminotransferase-cyclodeaminase; KEGG: sen:SACE_4497 methenyltetrahydrofolate cyclohydrolase YP_003409877.1 PFAM: glycine cleavage T protein (aminomethyl transferase); FAD dependent oxidoreductase; Glycine cleavage T-protein barrel; KEGG: rha:RHA1_ro01815 sarcosine dehydrogenase YP_003409878.1 PFAM: Sarcosine oxidase gamma subunit; KEGG: rop:ROP_15010 sarcosine oxidase gamma subunit YP_003409879.1 TIGRFAM: sarcosine oxidase, alpha subunit family; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: rop:ROP_15000 sarcosine oxidase alpha subunit YP_003409880.1 TIGRFAM: sarcosine oxidase, delta subunit family; PFAM: Sarcosine oxidase delta subunit heterotetrameric; KEGG: rop:ROP_14990 sarcosine oxidase delta subunit YP_003409881.1 TIGRFAM: sarcosine oxidase, beta subunit family; PFAM: FAD dependent oxidoreductase; KEGG: rop:ROP_14980 sarcosine oxidase beta subunit YP_003409882.1 PFAM: glycine hydroxymethyltransferase; aminotransferase class I and II; aromatic amino acid beta- eliminating lyase/threonine aldolase; KEGG: rha:RHA1_ro01820 glycine hydroxymethyltransferase YP_003409883.1 TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_3767 alcohol dehydrogenase YP_003409884.1 PFAM: beta-lactamase domain protein; KEGG: rer:RER_54690 hypothetical protein YP_003409885.1 PFAM: methylenetetrahydrofolate reductase; KEGG: sen:SACE_5618 5,10-methylenetetrahydrofolate reductase YP_003409886.1 PFAM: beta-lactamase domain protein; KEGG: rer:RER_57720 hypothetical protein YP_003409887.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: sma:SAV_6954 IclR family transcriptional regulator YP_003409888.1 TIGRFAM: formyltetrahydrofolate deformylase; PFAM: formyl transferase domain protein; amino acid- binding ACT domain protein; KEGG: sen:SACE_4502 formyltetrahydrofolate deformylase YP_003409889.1 KEGG: sen:SACE_4501 L-serine dehydratase; TIGRFAM: L-serine dehydratase 1; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain YP_003409890.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sma:SAV_6949 ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenase YP_003409891.1 KEGG: blj:BLD_0990 transposase YP_003409892.1 PFAM: ferredoxin; Oxidoreductase FAD-binding domain protein; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: mkm:Mkms_1543 ferredoxin YP_003409893.1 KEGG: sen:SACE_4499 dihydropteroate synthase; TIGRFAM: dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_003409895.1 TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02587 mycothiol-dependent formaldehyde dehydrogenase YP_003409896.1 PFAM: beta-lactamase domain protein; KEGG: sgr:SGR_5825 putative hydrolase YP_003409898.1 PFAM: transposase mutator type; MULE transposase, conserved domain; KEGG: mav:MAV_4319 transposase, mutator family protein YP_003409899.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: rxy:Rxyl_0757 choline/carnitine/betaine transport YP_003409901.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: sma:SAV_6954 IclR family transcriptional regulator YP_003409902.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: sen:SACE_3146 3-phenylpropionate dioxygenase ferredoxin subunit YP_003409903.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: nca:Noca_2609 choline/carnitine/betaine transporter YP_003409905.1 PFAM: MOSC domain containing protein; KEGG: gau:GAU_2214 hypothetical protein YP_003409906.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase YP_003409908.1 PFAM: Integral membrane protein TerC; KEGG: mgi:Mflv_5168 integral membrane protein TerC YP_003409909.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger; KEGG: kra:Krad_2105 Na+/H+ antiporter NhaA YP_003409910.1 KEGG: sen:SACE_2702 putative exporter of polyketide antibiotics-like protein YP_003409911.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: mkm:Mkms_2252 ABC transporter related YP_003409912.1 KEGG: nca:Noca_2357 hypothetical protein YP_003409914.1 KEGG: saq:Sare_3931 hypothetical protein YP_003409915.1 KEGG: rha:RHA1_ro08278 hypothetical protein YP_003409916.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); Na+/H+ antiporter MnhB subunit-related protein; KEGG: saq:Sare_3457 NADH dehydrogenase (quinone) YP_003409917.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: stp:Strop_3230 NADH-ubiquinone oxidoreductase, chain 4L YP_003409918.1 PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: stp:Strop_3229 putative monovalent cation/H+ antiporter subunit D YP_003409919.1 KEGG: saq:Sare_3454 cation antiporter YP_003409920.1 PFAM: multiple resistance and pH regulation protein F; KEGG: stp:Strop_3227 multiple resistance and pH regulation protein F YP_003409921.1 TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; PFAM: Na+/H+ antiporter subunit; KEGG: saq:Sare_3452 monovalent cation/proton antiporter, MnhG/PhaG subunit YP_003409922.1 KEGG: stp:Strop_1668 glucose-6-phosphate 1- dehydrogenase; TIGRFAM: glucose-6-phosphate 1-dehydrogenase; PFAM: glucose-6-phosphate dehydrogenase YP_003409923.1 PFAM: glycoside hydrolase 15-related; KEGG: kra:Krad_0096 glycoside hydrolase 15-related YP_003409924.1 PFAM: Transglycosylase-associated protein; KEGG: cmi:CMM_2668 hypothetical protein YP_003409925.1 PFAM: UspA domain protein; KEGG: saq:Sare_4578 UspA domain-containing protein YP_003409926.1 KEGG: cms:CMS_2638 hypothetical protein YP_003409927.1 KEGG: scl:sce0507 hypothetical protein YP_003409928.1 KEGG: nca:Noca_4866 CdaR family transcriptional regulator YP_003409929.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: sma:SAV_7392 two-component system response regulator YP_003409930.1 KEGG: sco:SCO5784 two-component sensor; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; SMART: histidine kinase HAMP region domain protein; ATP-binding region ATPase domain protein YP_003409931.1 KEGG: sen:SACE_0437 hypothetical protein YP_003409932.1 KEGG: rop:ROP_00760 hypothetical membrane protein YP_003409933.1 KEGG: fre:Franean1_3090 hypothetical protein YP_003409934.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: sco:SCO3603 potassium/proton antiporter YP_003409935.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein; KEGG: kra:Krad_0445 hypothetical protein YP_003409936.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; SMART: CBS domain containing protein; KEGG: kra:Krad_0446 hypothetical protein YP_003409938.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; AAA ATPase; KEGG: sen:SACE_5520 LuxR family transcriptional regulator YP_003409940.1 KEGG: mkm:Mkms_2554 hypothetical protein YP_003409941.1 KEGG: rer:RER_03220 hypothetical protein YP_003409943.1 KEGG: vap:Vapar_5791 hypothetical protein YP_003409944.1 KEGG: rha:RHA1_ro10273 IS3 family transposase YP_003409945.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; KEGG: fre:Franean1_4950 Na+/H+ antiporter NhaA YP_003409946.1 TIGRFAM: anion transporter; PFAM: sodium/sulphate symporter; Citrate transporter; KEGG: krh:KRH_20580 DASS family transporter YP_003409947.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: bay:RBAM_026990 malate dehydrogenase YP_003409948.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; biotin/lipoyl attachment domain-containing protein; KEGG: met:M446_1241 dihydrolipoamide dehydrogenase YP_003409949.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: mno:Mnod_7192 catalytic domain of components of various dehydrogenase complexes YP_003409950.1 TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; KEGG: mno:Mnod_7191 2-oxo-acid dehydrogenase E1 subunit, homodimeric type YP_003409951.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: cmi:CMM_1887 putative two-component system response regulator YP_003409953.1 PFAM: major facilitator superfamily MFS_1; KEGG: aau:AAur_2826 major facilitator transporter YP_003409954.1 KEGG: bcv:Bcav_1647 iron-regulated LSR2 protein precursor YP_003409955.1 KEGG: hypothetical protein LOC772051 YP_003409956.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase YP_003409957.1 PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; KEGG: mmi:MMAR_1646 hypothetical protein YP_003409958.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: fre:Franean1_5538 DNA binding domain- containing protein YP_003409959.1 PFAM: integrase family protein; KEGG: mkm:Mkms_2967 phage integrase family protein YP_003409960.1 PFAM: transposase IS4 family protein; KEGG: mac:MA2835 transposase YP_003409961.1 PFAM: alpha/beta hydrolase fold; KEGG: bcv:Bcav_0251 alpha/beta hydrolase fold protein YP_003409962.1 KEGG: fal:FRAAL2255 GTP-binding protein; TIGRFAM: ribosome-associated GTPase EngA; small GTP- binding protein; PFAM: GTP-binding protein HSR1-related; Miro domain protein; Ras family protein; SMART: AAA ATPase YP_003409963.1 TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region; KEGG: mva:Mvan_3275 cytidylate kinase YP_003409964.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase of the AroH class; KEGG: tfu:Tfu_1207 chorismate mutase YP_003409965.1 TIGRFAM: xylulokinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: stp:Strop_3591 xylulokinase YP_003409966.1 KEGG: ace:Acel_2064 xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel YP_003409967.1 PFAM: ROK family protein; KEGG: fre:Franean1_4664 ROK family protein YP_003409968.1 PFAM: small multidrug resistance protein; KEGG: cmi:CMM_0222 putative multidrug resistance membrane protein YP_003409969.1 PFAM: small multidrug resistance protein; KEGG: cmi:CMM_0221 putative multidrug resistance membrane protein YP_003409970.1 PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: sen:SACE_5237 pseudouridylate synthase ribosomal large subunit YP_003409971.1 TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB; KEGG: sen:SACE_5238 putative segregation and condensation protein B YP_003409972.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: sen:SACE_5239 segregation and condensation protein A YP_003409973.1 KEGG: sgr:SGR_5726 hypothetical protein YP_003409974.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: ace:Acel_1240 cobyrinic acid a,c-diamide synthase YP_003409975.1 TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: nca:Noca_2489 tyrosine recombinase XerD YP_003409976.1 KEGG: stp:Strop_1923 alanine dehydrogenase; TIGRFAM: alanine dehydrogenase; PFAM: alanine dehydrogenase/PNT domain protein YP_003409977.1 PFAM: protein of unknown function DUF336; KEGG: bam:Bamb_4308 hypothetical protein YP_003409978.1 KEGG: tfu:Tfu_0953 hypothetical protein YP_003409979.1 PFAM: peptidase M28; KEGG: scl:sce5740 aminopeptidase YP_003409980.1 KEGG: mbt:JTY_1880 alanine and proline rich secreted protein YP_003409981.1 PFAM: NUDIX hydrolase; KEGG: mgi:Mflv_3501 NUDIX hydrolase YP_003409982.1 KEGG: sen:SACE_5244 CTP synthetase; TIGRFAM: CTP synthase; PFAM: CTP synthase-like; glutamine amidotransferase class-I YP_003409983.1 KEGG: tfu:Tfu_0334 hypothetical protein YP_003409984.1 PFAM: glycosyl transferase group 1; KEGG: saq:Sare_1909 glycosyl transferase group 1 YP_003409985.1 PFAM: virulence factor MVIN family protein; multi antimicrobial extrusion protein MatE; KEGG: saq:Sare_1908 virulence factor MviN family protein YP_003409986.1 KEGG: stp:Strop_1916 hypothetical protein YP_003409987.1 KEGG: sen:SACE_5246 hypothetical protein YP_003409988.1 PFAM: Thiamin pyrophosphokinase catalytic region; KEGG: saq:Sare_1905 thiamin pyrophosphokinase catalytic region YP_003409989.1 PFAM: regulatory protein TetR; KEGG: nfa:nfa33040 putative transcriptional regulator YP_003409990.1 KEGG: hypothetical protein YP_003409991.1 TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein; KEGG: stp:Strop_1913 DNA repair protein RecN YP_003409992.1 PFAM: ATP-NAD/AcoX kinase; KEGG: rer:RER_32660 inorganic polyphosphate/ATP-NAD kinase YP_003409993.1 KEGG: nfa:nfa19960 putative cytotoxin/hemolysin; TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; SMART: RNA-binding S4 domain protein YP_003409994.1 KEGG: stp:Strop_1910 hypothetical protein YP_003409995.1 KEGG: sma:SAV_6494 hypothetical protein YP_003409996.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: fre:Franean1_1749 HAD family hydrolase YP_003409997.1 KEGG: fre:Franean1_1748 tetratricopeptide domain- containing protein YP_003409998.1 PFAM: conserved hypothetical protein; KEGG: fre:Franean1_1747 hypothetical protein YP_003409999.1 PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: tfu:Tfu_2039 hypothetical protein YP_003410000.1 KEGG: kra:Krad_3800 hypothetical protein YP_003410001.1 KEGG: sco:SCO1818 tyrosyl-tRNA synthetase; TIGRFAM: tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA- binding S4 domain protein YP_003410002.1 TIGRFAM: DNA-3-methyladenine glycosylase; PFAM: methylpurine-DNA glycosylase (MPG); KEGG: ace:Acel_1255 3-methyladenine DNA glycosylase YP_003410003.1 TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase; KEGG: fre:Franean1_1744 argininosuccinate lyase YP_003410004.1 TIGRFAM: arginine repressor; PFAM: arginine repressor; KEGG: sen:SACE_5265 arginine repressor (partial match) YP_003410005.1 TIGRFAM: ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase Asp/Orn-binding region; aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; KEGG: kra:Krad_3157 ornithine carbamoyltransferase YP_003410006.1 TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III; KEGG: mva:Mvan_3311 acetylornithine aminotransferase YP_003410007.1 TIGRFAM: acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase; KEGG: sen:SACE_5260 acetylglutamate kinase YP_003410008.1 KEGG: fal:FRAAL5207 bifunctional ornithine acetyltransferase/N-acetylglutamate synthase protein; TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_003410009.1 KEGG: sen:SACE_5263 N-acetyl-gamma-glutamyl- phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_003410010.1 KEGG: noc:Noc_1795 hypothetical protein YP_003410012.1 PFAM: diacylglycerol kinase catalytic region; KEGG: aau:AAur_4154 diacylglycerol kinase catalytic subunit YP_003410013.1 KEGG: stp:Strop_1887 phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_003410014.1 KEGG: saq:Sare_1879 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_003410015.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: sen:SACE_2131 hypothetical protein YP_003410017.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: saq:Sare_1878 tRNA/rRNA methyltransferase (SpoU) YP_003410018.1 TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20; KEGG: fal:FRAAL5214 50S ribosomal protein L20 YP_003410019.1 TIGRFAM: ribosomal protein L35; PFAM: ribosomal protein L35; KEGG: kra:Krad_3168 ribosomal protein L35 YP_003410020.1 TIGRFAM: translation initiation factor IF-3; PFAM: Translation initiation factor 3-like; KEGG: sma:SAV_6737 translation initiation factor IF- 3 YP_003410021.1 PFAM: Protein of unknown function DUF2581; KEGG: saq:Sare_1874 hypothetical protein YP_003410022.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: art:Arth_0329 response regulator receiver/ANTAR domain-containing protein YP_003410023.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: nfa:nfa2970 hypothetical protein YP_003410024.1 PFAM: Uroporphyrinogen III synthase HEM4; transcriptional regulator domain protein; KEGG: sma:SAV_5120 bifunctional uroporphyrinogen- III synthetase/response regulator domain protein YP_003410025.1 PFAM: major facilitator superfamily MFS_1; KEGG: fal:FRAAL2076 nitrite extrusion protein YP_003410026.1 KEGG: nmu:Nmul_A2756 hypothetical protein YP_003410027.1 TIGRFAM: RNA polymerase sigma-70 factor, sigma-E family; RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; KEGG: fre:Franean1_1601 ECF subfamily RNA polymerase sigma-24 factor YP_003410028.1 KEGG: hypothetical protein YP_003410029.1 KEGG: ach:Achl_1133 hypothetical protein YP_003410030.1 PFAM: Methyltransferase type 11; thiopurine S- methyltransferase; Methyltransferase type 12; KEGG: art:Arth_0430 methyltransferase type 12 YP_003410031.1 PFAM: Cupin 2 conserved barrel domain protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: rha:RHA1_ro04105 transcriptional regulator YP_003410032.1 PFAM: O-methyltransferase family 2; KEGG: syf:Synpcc7942_0499 hydroxyneurosporene-O- methyltransferase YP_003410033.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: art:Arth_3274 Rieske (2Fe-2S) domain- containing protein YP_003410034.1 TIGRFAM: nitrite reductase [NAD(P)H], large subunit; PFAM: nitrite and sulphite reductase 4Fe-4S region; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; BFD domain protein [2Fe-2S]-binding domain protein; nitrite/sulfite reductase hemoprotein beta- component ferrodoxin domain protein; KEGG: kra:Krad_1328 nitrite reductase (NAD(P)H), large subunit YP_003410035.1 PFAM: molybdopterin oxidoreductase; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide- binding region; KEGG: fra:Francci3_0863 assimilatory nitrate reductase (NADH) alpha subunit apoprotein YP_003410036.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nfa:nfa35900 putative acetyltransferase YP_003410038.1 PFAM: YCII-related; KEGG: art:Arth_3350 DGPFAETKE family protein YP_003410039.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bcv:Bcav_4085 putative RNA polymerase, sigma- 24 subunit, ECF subfamily YP_003410040.1 PFAM: Class I peptide chain release factor; KEGG: sen:SACE_6346 peptidyl-tRNA hydrolase domain protein YP_003410041.1 PFAM: protein of unknown function DUF37; KEGG: ank:AnaeK_4496 protein of unknown function DUF37 YP_003410042.1 PFAM: homocysteine S-methyltransferase; KEGG: sen:SACE_3890 homocysteine methyltransferase YP_003410043.1 KEGG: kra:Krad_2861 hypothetical protein YP_003410044.1 KEGG: art:Arth_2033 hypothetical protein YP_003410045.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: mpa:MAP2951 hypothetical protein YP_003410046.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: mkm:Mkms_5350 DEAD/DEAH box helicase domain- containing protein YP_003410048.1 PFAM: protein of unknown function DUF81; KEGG: nfa:nfa3090 hypothetical protein YP_003410049.1 KEGG: kra:Krad_4493 hypothetical protein YP_003410050.1 PFAM: protein of unknown function DUF81; KEGG: mjl:Mjls_1787 hypothetical protein YP_003410051.1 KEGG: hypothetical protein YP_003410052.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sen:SACE_3013 putative cysteine synthase YP_003410053.1 TIGRFAM: non-ribosomal peptide synthetase; PFAM: phosphopantetheine-binding; transferase hexapeptide repeat containing protein; KEGG: sma:SAV_7165 non-ribosomal peptide synthetase YP_003410054.1 TIGRFAM: amino acid adenylation domain protein; PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: sen:SACE_3015 non-ribosomal peptide synthetase YP_003410055.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: sma:SAV_7164 SyrP-like protein YP_003410056.1 PFAM: ornithine cyclodeaminase/mu-crystallin; KEGG: sma:SAV_7163 ornithine cyclodeaminase YP_003410057.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: hmo:HM1_2697 threonine synthase YP_003410058.1 KEGG: aau:AAur_pTC10162 hypothetical protein YP_003410059.1 PFAM: 4'-phosphopantetheinyl transferase; KEGG: bwe:BcerKBAB4_2182 4'-phosphopantetheinyl transferase YP_003410060.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: art:Arth_4088 alpha amylase, catalytic region YP_003410061.1 TIGRFAM: F420-dependent oxidoreductase, G6PDH family; KEGG: mjl:Mjls_4980 putative dehydrogenase protein YP_003410062.1 KEGG: rrs:RoseRS_2343 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003410063.1 KEGG: stp:Strop_4408 hypothetical protein YP_003410064.1 PFAM: conserved hypothetical protein; KEGG: tfu:Tfu_1712 hypothetical protein YP_003410065.1 KEGG: spe:Spro_3038 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_003410066.1 KEGG: bte:BTH_II0046 3-oxoadipate CoA-transferase, alpha subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_003410067.1 PFAM: thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; thiamine pyrophosphate protein TPP binding domain protein; KEGG: sgr:SGR_4789 putative acetolactate synthase YP_003410068.1 PFAM: conserved hypothetical protein; KEGG: tfu:Tfu_1712 hypothetical protein YP_003410069.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: msm:MSMEG_0125 integral membrane protein YP_003410070.1 KEGG: ach:Achl_0354 hypothetical protein YP_003410071.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: sen:SACE_4009 LysR family transcriptional regulator YP_003410072.1 PFAM: conserved hypothetical protein; KEGG: bbr:BB2371 hypothetical protein YP_003410073.1 KEGG: mbt:JTY_1798 putative 4-alpha- glucanotransferase; TIGRFAM: 4-alpha-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_003410074.1 KEGG: nca:Noca_2270 hypothetical protein YP_003410076.1 PFAM: protein of unknown function DUF55; KEGG: kra:Krad_4224 hypothetical protein YP_003410077.1 PFAM: Protein of unknown function DUF998; KEGG: art:Arth_0810 hypothetical protein YP_003410078.1 KEGG: fre:Franean1_1972 hypothetical protein YP_003410079.1 PFAM: UspA domain protein; KEGG: mva:Mvan_1372 UspA domain-containing protein YP_003410080.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; NmrA family protein; KEGG: sco:SCO1445 hypothetical protein YP_003410081.1 PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: bcv:Bcav_3260 transcriptional regulator, XRE family YP_003410082.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: npu:Npun_R3707 short-chain dehydrogenase/reductase SDR YP_003410083.1 KEGG: sth:STH2472 hypothetical protein YP_003410084.1 PFAM: purine catabolism PurC domain protein; KEGG: rop:ROP_27970 putative CdaR family transcriptional regulator YP_003410085.1 KEGG: tro:trd_0575 hypothetical protein YP_003410086.1 KEGG: tfu:Tfu_0174 ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region; Histidine biosynthesis protein HisG domain YP_003410087.1 TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: phosphoribosyl-ATP pyrophosphohydrolase; KEGG: stp:Strop_1879 phosphoribosyl-ATP pyrophosphatase YP_003410088.1 KEGG: sen:SACE_2124 riboflavin synthase beta chain; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_003410089.1 TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2- butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II; KEGG: nfa:nfa36000 bifunctional 3,4-dihydroxy-2- butanone 4-phosphate synthase/GTP cyclohydrolase II protein YP_003410090.1 KEGG: sgr:SGR_6090 riboflavin synthase subunit alpha; TIGRFAM: riboflavin synthase, alpha subunit; PFAM: Lumazine-binding protein YP_003410091.1 KEGG: kra:Krad_0126 riboflavin biosynthesis protein RibD; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_003410092.1 KEGG: mav:MAV_3370 ribulose-phosphate 3-epimerase; TIGRFAM: ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_003410093.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; KEGG: kra:Krad_4531 integral membrane sensor signal transduction histidine kinase YP_003410094.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: nca:Noca_2635 response regulator receiver YP_003410095.1 KEGG: nha:Nham_3622 OmpA/MotB YP_003410096.1 PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; KEGG: sco:SCO1472 putative Sun-family protein YP_003410097.1 TIGRFAM: methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: tfu:Tfu_1075 methionyl-tRNA formyltransferase YP_003410098.1 KEGG: nca:Noca_2441 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_003410099.1 KEGG: Os07g0247000; hypothetical protein YP_003410101.1 KEGG: fra:Francci3_3191 primosome assembly protein PriA YP_003410102.1 KEGG: fre:Franean1_1716 S-adenosylmethionine synthetase; TIGRFAM: S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_003410103.1 KEGG: sma:SAV_6873 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; PFAM: DNA/pantothenate metabolism flavoprotein domain protein; flavoprotein YP_003410104.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; KEGG: stp:Strop_1862 DNA-directed RNA polymerase subunit omega YP_003410105.1 KEGG: tfu:Tfu_1062 guanylate kinase; TIGRFAM: guanylate kinase; PFAM: guanylate kinase; SMART: guanylate kinase/L-type calcium channel region YP_003410106.1 KEGG: tfu:Tfu_1061 hypothetical protein YP_003410107.1 KEGG: sco:SCO1481 orotidine 5'-phosphate decarboxylase; TIGRFAM: orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_003410108.1 PFAM: dihydroorotate oxidase; KEGG: zmo:ZMO0120 hypothetical protein YP_003410109.1 TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; MGS domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; Carbamoyl- phosphate synthetase large chain domain protein; KEGG: sen:SACE_2083 carbamoyl-phosphate synthase large subunit YP_003410110.1 KEGG: sco:SCO1484 carbamoyl phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_003410112.1 TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase; KEGG: ace:Acel_1300 dihydroorotase YP_003410113.1 KEGG: ace:Acel_1301 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_003410114.1 PFAM: phosphoribosyltransferase; KEGG: fra:Francci3_3203 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase YP_003410115.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: sen:SACE_2077 putative transcriptional regulator (DNA-binding protein) YP_003410116.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: msm:MSMEG_4205 putative transcriptional regulator YP_003410117.1 KEGG: mmi:MMAR_1199 PE-PGRS family protein YP_003410118.1 KEGG: mmi:MMAR_5135 PE-PGRS family protein, PE_PGRS15 YP_003410119.1 KEGG: sen:SACE_3021 hypothetical protein YP_003410120.1 KEGG: hypothetical protein YP_003410121.1 KEGG: mbo:Mb3538 PE-PGRS family protein YP_003410122.1 PFAM: glutamine cyclotransferase; KEGG: mgi:Mflv_1065 glutamine cyclotransferase YP_003410124.1 TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44; KEGG: ace:Acel_1304 NusB antitermination factor YP_003410125.1 TIGRFAM: translation elongation factor P; PFAM: Elongation factor KOW domain protein; Elongation factor P ; Elongation factor P/YeiP protein; KEGG: sen:SACE_2075 elongation factor P YP_003410126.1 PFAM: peptidase M24; creatinase; KEGG: sen:SACE_2074 Xaa-Pro dipeptidase YP_003410127.1 KEGG: mkm:Mkms_2402 3-dehydroquinate dehydratase; TIGRFAM: 3-dehydroquinate dehydratase, type II; PFAM: dehydroquinase class II YP_003410128.1 KEGG: kra:Krad_3013 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_003410129.1 PFAM: shikimate kinase; KEGG: fal:FRAAL5246 shikimate kinase YP_003410130.1 KEGG: tfu:Tfu_1090 chorismate synthase; TIGRFAM: chorismate synthase; PFAM: chorismate synthase YP_003410131.1 PFAM: peptidase A24A prepilin type IV; KEGG: fal:FRAAL5248 putative integral membrane peptidase YP_003410132.1 TIGRFAM: shikimate-5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase; KEGG: mgi:Mflv_3760 shikimate 5-dehydrogenase YP_003410133.1 PFAM: aminodeoxychorismate lyase; KEGG: kra:Krad_3030 aminodeoxychorismate lyase YP_003410134.1 PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold; KEGG: mab:MAB_2850c putative Holliday junction resolvase YP_003410135.1 KEGG: mlu:Mlut_12720 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; phosphoesterase DHHA1; Threonyl/alanyl tRNA synthetase SAD YP_003410136.1 KEGG: stp:Strop_1827 hypothetical protein YP_003410137.1 KEGG: sen:SACE_2050 secreted protein YP_003410138.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sen:SACE_2048 recombination factor protein RarA YP_003410139.1 PFAM: aldo/keto reductase; KEGG: sco:SCO7654 oxidoreductase YP_003410140.1 KEGG: mav:MAV_4706 hypothetical protein YP_003410141.1 TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); tRNA synthetase class II (G H P and S); GAD domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: sen:SACE_2041 aspartyl-tRNA synthetase YP_003410142.1 PFAM: aldo/keto reductase; KEGG: sgr:SGR_6491 putative oxidoreductase YP_003410143.1 KEGG: sen:SACE_2032 histidyl-tRNA synthetase; TIGRFAM: histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_003410144.1 PFAM: beta-lactamase domain protein; KEGG: stp:Strop_1818 beta-lactamase domain- containing protein YP_003410145.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: nfa:nfa36650 putative peptidyl-prolyl cis- trans isomerase YP_003410146.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: nca:Noca_2690 peptidyl-prolyl cis-trans isomerase, cyclophilin type YP_003410147.1 KEGG: chl:Chy400_2116 methyltransferase type 11 YP_003410148.1 KEGG: ace:Acel_1338 (p)ppGpp synthetase I, SpoT/RelA; TIGRFAM: RelA/SpoT family protein; PFAM: RelA/SpoT domain protein; TGS domain protein; amino acid-binding ACT domain protein; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003410149.1 PFAM: phosphoribosyltransferase; KEGG: saq:Sare_1804 adenine phosphoribosyltransferase YP_003410150.1 TIGRFAM: protein-export membrane protein SecF; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: saq:Sare_1803 protein-export membrane protein SecF YP_003410151.1 TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein; KEGG: rop:ROP_68750 protein-export membrane protein SecD YP_003410152.1 TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein; KEGG: rop:ROP_68740 putative protein-export membrane protein YajC YP_003410153.1 KEGG: stp:Strop_1810 Holliday junction DNA helicase RuvB; TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003410154.1 KEGG: stp:Strop_1809 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein; SMART: Helix-hairpin-helix DNA-binding class 1 YP_003410155.1 KEGG: sen:SACE_2021 crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_003410156.1 PFAM: protein of unknown function DUF28; KEGG: sma:SAV_6832 hypothetical protein YP_003410157.1 PFAM: SNO glutamine amidotransferase; CobB/CobQ domain protein glutamine amidotransferase; KEGG: tfu:Tfu_2097 glutamine amidotransferase subunit PdxT YP_003410158.1 KEGG: cmi:CMM_0890 hypothetical protein YP_003410159.1 TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein; thiazole biosynthesis family protein; KEGG: sen:SACE_2009 pyridoxal biosynthesis lyase PdxS YP_003410160.1 KEGG: rha:RHA1_ro06883 hypothetical protein YP_003410161.1 PFAM: glycosyl transferase group 1; KEGG: ace:Acel_1353 phosphatidylinositol alpha- mannosyltransferase YP_003410162.1 PFAM: lipid A biosynthesis acyltransferase; KEGG: fra:Francci3_1363 lipid A biosynthesis lauroyl acyltransferase YP_003410163.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: rop:ROP_68590 phosphatidylinositol synthase YP_003410164.1 PFAM: histidine triad (HIT) protein; KEGG: sgr:SGR_6005 hypothetical protein YP_003410165.1 TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein; Threonyl/alanyl tRNA synthetase SAD; KEGG: sen:SACE_2004 threonyl-tRNA synthetase YP_003410166.1 PFAM: MOSC domain protein beta barrel domain protein; KEGG: kra:Krad_3067 hypothetical protein YP_003410167.1 KEGG: rha:RHA1_ro03393 hypothetical protein YP_003410168.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: rxy:Rxyl_2316 bifunctional deaminase- reductase-like protein YP_003410169.1 PFAM: Protein of unknown function, PGPGW, transmembrane; KEGG: kra:Krad_3068 hypothetical protein YP_003410170.1 KEGG: ace:Acel_0351 putative transmembrane anti- sigma factor YP_003410171.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: ace:Acel_0350 ECF subfamily RNA polymerase sigma-24 factor YP_003410172.1 PFAM: sporulation and cell division protein SsgA; KEGG: fre:Franean1_5158 sporulation and cell division protein SsgA YP_003410173.1 TIGRFAM: dephospho-CoA kinase; KEGG: rop:ROP_07070 dephospho-CoA kinase YP_003410175.1 PFAM: RNA binding S1 domain protein; KEGG: sen:SACE_5431 30S ribosomal protein S1 YP_003410176.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sen:SACE_5432 SAM-dependent methyltransferase YP_003410177.1 KEGG: fre:Franean1_2043 DNA polymerase I; TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; SMART: 5'-3' exonuclease; DNA-directed DNA polymerase; Helix-hairpin-helix domain protein class 2 YP_003410178.1 PFAM: thioesterase superfamily protein; KEGG: sen:SACE_5438 phenylacetic acid degradation- related protein YP_003410179.1 PFAM: inner-membrane translocator; Cna B domain protein; KEGG: rop:ROP_07200 putative ABC transporter permease protein YP_003410180.1 PFAM: inner-membrane translocator; KEGG: rop:ROP_07210 putative ABC transporter permease protein YP_003410181.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rop:ROP_07220 putative ABC transporter ATP- binding protein YP_003410182.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro00994 ABC branched-chain amino acid transport, ATP-binding component YP_003410183.1 KEGG: saq:Sare_0174 ABC-type branched-chain amino acid transport systems periplasmic component-like protein YP_003410184.1 PFAM: response regulator receiver; ANTAR domain protein; SMART: response regulator receiver; KEGG: stp:Strop_3151 response regulator receiver YP_003410185.1 PFAM: Pyridoxal-dependent decarboxylase; KEGG: aba:Acid345_2160 aromatic-L-amino-acid decarboxylase YP_003410186.1 PFAM: acyl-CoA thioesterase; KEGG: saq:Sare_3384 palmitoyl-CoA hydrolase YP_003410187.1 KEGG: msm:MSMEG_3227 pyruvate kinase; TIGRFAM: pyruvate kinase; PFAM: Pyruvate kinase barrel; HpcH/HpaI aldolase; Pyruvate kinase alpha/beta YP_003410188.1 TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_3012 glutamate synthase subunit beta YP_003410189.1 PFAM: ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamate synthase; glutamine amidotransferase class-II; KEGG: sen:SACE_5742 putative glutamate synthase(NADPH) large subunit YP_003410190.1 TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase; KEGG: kra:Krad_2962 prolipoprotein diacylglyceryl transferase YP_003410191.1 KEGG: fra:Francci3_3015 tryptophan synthase subunit alpha; TIGRFAM: tryptophan synthase, alpha subunit; PFAM: tryptophan synthase alpha chain YP_003410192.1 TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cmi:CMM_1763 tryptophan synthase subunit beta YP_003410193.1 PFAM: phosphoribosyltransferase; KEGG: cms:CMS_2395 adenine phosphoribosyltransferase YP_003410194.1 PFAM: Indole-3-glycerol phosphate synthase; KEGG: stp:Strop_3172 indole-3-glycerol-phosphate synthase YP_003410195.1 PFAM: Trp biosynthesis associated, transmembrane protein, Oprn/Chp; KEGG: saq:Sare_3399 hypothetical protein YP_003410196.1 KEGG: fal:FRAAL4972 anthranilate synthase component I; TIGRFAM: anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_003410197.1 PFAM: phosphoribosyl-AMP cyclohydrolase; KEGG: saq:Sare_3401 phosphoribosyl-AMP cyclohydrolase YP_003410198.1 KEGG: cmi:CMM_1048 hypothetical protein YP_003410199.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: sma:SAV_6621 putative FAD-binding dehydrogenase YP_003410200.1 KEGG: scl:sce2582 hypothetical protein YP_003410201.1 KEGG: ach:Achl_3094 hypothetical protein YP_003410202.1 KEGG: ank:AnaeK_2647 putative CheA signal transduction histidine kinase YP_003410203.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: tfu:Tfu_1158 ABC-type multidrug transport system ATPase and permease components YP_003410204.1 PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase; KEGG: stp:Strop_3181 ABC transporter related YP_003410205.1 KEGG: sma:SAV_6169 hypothetical protein YP_003410206.1 KEGG: kra:Krad_2971 imidazoleglycerol phosphate synthase, cyclase subunit; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_003410207.1 PFAM: Endoribonuclease L-PSP; KEGG: dra:DR_0033 hypothetical protein YP_003410208.1 KEGG: kra:Krad_3173 phosphoribosyl isomerase A; TIGRFAM: bifunctional HisA/TrpF protein; PFAM: histidine biosynthesis protein YP_003410210.1 PFAM: nitroreductase; KEGG: saq:Sare_0515 nitroreductase YP_003410211.1 PFAM: short-chain dehydrogenase/reductase SDR; NAD- dependent epimerase/dehydratase; KEGG: ote:Oter_2022 short-chain dehydrogenase/reductase SDR YP_003410212.1 PFAM: oxidoreductase molybdopterin binding; KEGG: hma:rrnAC3141 sulfite oxidase YP_003410213.1 TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I; KEGG: nca:Noca_3042 imidazole glycerol phosphate synthase subunit HisH YP_003410214.1 KEGG: fal:FRAAL3457 hypothetical protein YP_003410216.1 PFAM: imidazoleglycerol-phosphate dehydratase; KEGG: tfu:Tfu_1152 imidazoleglycerol-phosphate dehydratase YP_003410217.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: sco:SCO2053 histidinol-phosphate aminotransferase YP_003410218.1 KEGG: sgr:SGR_5450 histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_003410219.1 PFAM: peptidase S16 lon domain protein; SMART: peptidase S16 lon domain protein; KEGG: saq:Sare_3423 peptidase S16 lon domain- containing protein YP_003410220.1 KEGG: sma:SAV_6148 hypothetical protein YP_003410221.1 KEGG: kra:Krad_3187 DNA polymerase III subunit alpha; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003410222.1 PFAM: GCN5-related N-acetyltransferase; KEGG: afw:Anae109_4351 GCN5-related N- acetyltransferase YP_003410223.1 PFAM: Abortive infection protein; KEGG: sth:STH2474 hypothetical protein YP_003410224.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: sen:SACE_5823 ribosomal large subunit pseudouridine synthase YP_003410225.1 TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II; KEGG: sen:SACE_5824 lipoprotein signal peptidase YP_003410226.1 KEGG: art:Arth_4255 malate:quinone oxidoreductase; TIGRFAM: malate/quinone oxidoreductase; PFAM: Malate:quinone-oxidoreductase; FAD dependent oxidoreductase YP_003410227.1 PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; KEGG: sen:SACE_6167 potassium/proton antiporter YP_003410228.1 TIGRFAM: isoleucyl-tRNA synthetase; KEGG: sco:SCO2076 isoleucyl-tRNA synthetase YP_003410229.1 KEGG: sen:SACE_5829 hypothetical protein YP_003410230.1 TIGRFAM: DivIVA domain; PFAM: DivIVA family protein; KEGG: sen:SACE_5830 cell division initiation protein YP_003410231.1 PFAM: protein of unknown function YGGT; KEGG: nca:Noca_3056 hypothetical protein YP_003410232.1 PFAM: protein of unknown function DUF552; KEGG: stp:Strop_3208 hypothetical protein YP_003410233.1 PFAM: alanine racemase domain protein; KEGG: kra:Krad_3194 alanine racemase domain- containing protein YP_003410234.1 PFAM: protein of unknown function DUF152; KEGG: rha:RHA1_ro01084 hypothetical protein YP_003410235.1 TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain; KEGG: saq:Sare_3436 cell division protein FtsZ YP_003410236.1 TIGRFAM: uncharacterized peroxidase-related enzyme; alkylhydroperoxidase like protein, AhpD family; PFAM: Carboxymuconolactone decarboxylase; KEGG: rpe:RPE_2026 uncharacterized peroxidase- related enzyme YP_003410237.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; cell division protein FtsQ; KEGG: saq:Sare_3437 polypeptide-transport- associated domain-containing protein YP_003410238.1 TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein; KEGG: sen:SACE_5850 UDP-N-acetylmuramate--L-alanine ligase YP_003410239.1 KEGG: mgi:Mflv_2988 undecaprenyldiphospho- muramoylpentapeptide beta-N-acetylglucosaminyltransferase; TIGRFAM:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase; PFAM: Glycosyltransferase 28 domain; glycosyl transferase family 28 YP_003410240.1 TIGRFAM: cell division protein FtsW; PFAM: cell cycle protein; KEGG: mbb:BCG_2171c FtsW-like protein FtsW YP_003410241.1 TIGRFAM:phospho-N-acetylmuramoyl-pentapeptide- transf erase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; KEGG: fre:Franean1_5101 phospho-N-acetylmuramoyl- pentapeptide-transferase YP_003410242.1 TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diamin opimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: ace:Acel_1006 UDP-N-acetylmuramoyl-tripeptide- -D-alanyl-D-alanine ligase YP_003410243.1 TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: sen:SACE_5856 UDP-N-acetylmuramoylalanyl-D- glutamate--2,6-diaminopimelate ligase YP_003410244.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: tfu:Tfu_1104 peptidoglycan glycosyltransferase YP_003410245.1 KEGG: fre:Franean1_5105 hypothetical protein YP_003410246.1 TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase; KEGG: tfu:Tfu_1102 methyltransferase YP_003410247.1 TIGRFAM: MraZ protein; PFAM: MraZ domain; KEGG: ace:Acel_1001 cell division protein MraZ YP_003410248.1 PFAM: ATPase associated with various cellular activities AAA_3; ATPase associated with various cellular activities AAA_5; KEGG: stp:Strop_3232 ATPase YP_003410249.1 PFAM: protein of unknown function DUF58; KEGG: ace:Acel_0999 hypothetical protein YP_003410250.1 PFAM: transglutaminase domain protein; SMART: transglutaminase domain protein; KEGG: fre:Franean1_5110 transglutaminase domain- containing protein YP_003410252.1 KEGG: mjl:Mjls_3277 putative transmembrane protein YP_003410253.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: kra:Krad_3213 DNA-directed DNA polymerase YP_003410254.1 KEGG: mxa:MXAN_5661 putative BatC protein YP_003410255.1 PFAM: Cupin 4 family protein; SMART: transcription factor jumonji jmjC domain protein; KEGG: saq:Sare_2302 cupin 4 family protein YP_003410256.1 PFAM: Sucraseferredoxin family protein; KEGG: mgi:Mflv_0338 sucraseferredoxin family protein YP_003410257.1 PFAM: beta-lactamase; KEGG: lpn:lpg2919 (serine-type) D-alanyl-D-alanine carboxypeptidase YP_003410258.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: stp:Strop_3237 type I phosphodiesterase/nucleotide pyrophosphatase YP_003410259.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: saq:Sare_3464 methyltransferase type 11 YP_003410260.1 PFAM: 3-demethylubiquinone-9 3-methyltransferase; KEGG: fre:Franean1_4069 3-demethylubiquinone-9 3- methyltransferase YP_003410261.1 KEGG: kra:Krad_3215 DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: phosphoesterase PHP domain protein YP_003410262.1 KEGG: nca:Noca_3078 hypothetical protein YP_003410263.1 KEGG: cms:CMS_1780 hypothetical protein YP_003410264.1 PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: tfu:Tfu_1048 hypothetical protein YP_003410265.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_3245 GCN5-related N- acetyltransferase YP_003410266.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: rha:RHA1_ro01101 beta-carotene ketolase YP_003410267.1 PFAM: protein of unknown function DUF422; KEGG: stp:Strop_3246 hypothetical protein YP_003410268.1 PFAM: glycosyl transferase family 2; KEGG: fre:Franean1_5123 glycosyl transferase family protein YP_003410269.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: rop:ROP_16720 hypothetical protein YP_003410270.1 PFAM: PfkB domain protein; KEGG: fra:Francci3_3120 adenosine kinase YP_003410271.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: fal:FRAAL2165 CDP-diacylglycerol-inositol 3- phosphatidyltransferase YP_003410272.1 PFAM: lipase class 2; PGAP1 family protein; KEGG: stp:Strop_3161 lipase, class 2 YP_003410273.1 PFAM: Activator of Hsp90 ATPase 1 family protein; regulatory protein ArsR; Polyketide cyclase/dehydrase; SMART: regulatory protein ArsR; KEGG: mab:MAB_0986 ArsR family transcriptional regulator YP_003410274.1 KEGG: nca:Noca_4594 hypothetical protein YP_003410275.1 KEGG: ace:Acel_0928 putative ABC transporter membrane protein YP_003410276.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO4585 ABC transporter ATP-binding protein YP_003410277.1 KEGG: saq:Sare_1553 hypothetical protein YP_003410278.1 PFAM: protein of unknown function DUF808; KEGG: kra:Krad_4423 hypothetical protein YP_003410279.1 KEGG: GK23430 gene product from transcript GK23430- RA YP_003410281.1 KEGG: kra:Krad_1364 hypothetical protein YP_003410282.1 KEGG: saq:Sare_3477 5,10-methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; PFAM: methylenetetrahydrofolate reductase YP_003410283.1 PFAM: Polyprenyl synthetase; KEGG: saq:Sare_3478 polyprenyl synthetase YP_003410284.1 TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: sen:SACE_1713 phytoene desaturase YP_003410285.1 PFAM: Squalene/phytoene synthase; KEGG: mjl:Mjls_5455 phytoene synthase YP_003410286.1 TIGRFAM: lycopene cyclase domain protein; KEGG: fre:Franean1_1844 hypothetical protein YP_003410287.1 TIGRFAM: lycopene cyclase domain protein; KEGG: fre:Franean1_1843 hypothetical protein YP_003410288.1 KEGG: fra:Francci3_3072 putative transcriptional regulatory protein YP_003410289.1 PFAM: glycine hydroxymethyltransferase; KEGG: nca:Noca_2352 serine hydroxymethyltransferase YP_003410290.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; PASTA domain containing protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; PASTA domain containing protein; KEGG: sco:SCO2110 serine/threonine protein kinase YP_003410291.1 KEGG: stp:Strop_3254 apurinic endonuclease Apn1; TIGRFAM: apurinic endonuclease Apn1; PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2 YP_003410292.1 PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class I and II; KEGG: nca:Noca_3094 L-threonine aldolase YP_003410293.1 KEGG: sen:SACE_1708 phospho-2-dehydro-3- deoxyheptonate aldolase; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; PFAM: DAHP synthetase class II YP_003410294.1 KEGG: tfu:Tfu_1037 6-phosphofructokinase; TIGRFAM: phosphofructokinase; PFAM: phosphofructokinase YP_003410295.1 PFAM: NmrA family protein; KEGG: bcv:Bcav_2683 NmrA family protein YP_003410296.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: kra:Krad_1217 methyl-accepting chemotaxis sensory transducer YP_003410297.1 KEGG: stp:Strop_3268 hypothetical protein YP_003410298.1 KEGG: sen:SACE_7074 hypothetical protein YP_003410299.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: sen:SACE_1702 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_003410300.1 KEGG: sen:SACE_1701 hypothetical protein YP_003410301.1 TIGRFAM: glucokinase, ROK family; PFAM: ROK family protein; KEGG: art:Arth_1548 glucokinase YP_003410302.1 KEGG: sen:SACE_1699 hypothetical protein YP_003410303.1 KEGG: sgr:SGR_5375 putative ion transporting ATPase YP_003410304.1 PFAM: cyclase/dehydrase; Polyketide cyclase/dehydrase; KEGG: nfa:nfa17160 hypothetical protein YP_003410305.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sen:SACE_1694 putative long-chain fatty acid ligase YP_003410306.1 PFAM: peptidase M48 Ste24p; KEGG: stp:Strop_3283 STE24 endopeptidase YP_003410307.1 KEGG: fre:Franean1_1818 hypothetical protein YP_003410308.1 PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin; NLP/P60 protein; KEGG: kra:Krad_1895 peptidase M15B and M15C dd- carboxypeptidase VanY/endolysin YP_003410309.1 KEGG: fre:Franean1_1813 hypothetical protein; TIGRFAM: DNA polymerase III, epsilon subunit; PFAM: Exonuclease RNase T and DNA polymerase III; Excinuclease ABC C subunit domain protein; SMART: Exonuclease; Excinuclease ABC C subunit domain protein YP_003410310.1 PFAM: Transcription regulator, AsnC-type-like; KEGG: saq:Sare_3522 AsnC family transcriptional regulator YP_003410311.1 KEGG: ace:Acel_0966 anthranilate phosphoribosyltransferase; TIGRFAM: anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_003410312.1 KEGG: fal:FRAAL5119 putative two-component system response regulator YP_003410313.1 PFAM: cytochrome c oxidase subunit III; KEGG: msm:MSMEG_4260 cytochrome c oxidase subunit 3 YP_003410314.1 PFAM: cytochrome c class I; KEGG: nfa:nfa17270 putative cytochrome c component YP_003410315.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: rer:RER_35970 menaquinol-cytochrome c reductase iron-sulfur protein YP_003410316.1 PFAM: Cytochrome b/b6 domain; KEGG: saq:Sare_3524 cytochrome b/b6 domain- containing protein YP_003410317.1 KEGG: sen:SACE_1679 integral membrane protein YP_003410318.1 TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; KEGG: rer:RER_36020 cytochrome c oxidase subunit II YP_003410319.1 KEGG: sen:SACE_6354 hypothetical protein YP_003410320.1 KEGG: kra:Krad_0753 hypothetical protein YP_003410321.1 KEGG: sen:SACE_1677 asparagine synthase (glutamine- hydrolyzing); TIGRFAM: asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_003410322.1 TIGRFAM: iron-sulfur cluster assembly accessory protein; PFAM: HesB/YadR/YfhF-family protein; KEGG: sco:SCO2161 hypothetical protein YP_003410323.1 KEGG: sgr:SGR_5340 putative integral membrane protein YP_003410324.1 PFAM: aldo/keto reductase; KEGG: sen:SACE_1652 aldo/keto reductase family oxidoreductase YP_003410325.1 KEGG: sgr:SGR_5337 hypothetical protein YP_003410326.1 PFAM: protein of unknown function DUF1469; KEGG: kra:Krad_4481 hypothetical protein YP_003410327.1 KEGG: nca:Noca_0933 hypothetical protein YP_003410328.1 KEGG: nfa:nfa23230 hypothetical protein YP_003410329.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: kra:Krad_1517 putative ribonuclease BN YP_003410330.1 TIGRFAM: glycine cleavage system T protein; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: fal:FRAAL5148 glycine cleavage system aminomethyltransferase T YP_003410331.1 PFAM: peptidase M17 leucyl aminopeptidase domain protein; KEGG: sen:SACE_1642 leucyl aminopeptidase YP_003410332.1 KEGG: saq:Sare_3550 hypothetical protein YP_003410333.1 TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; KEGG: ace:Acel_0936 dihydrolipoamide dehydrogenase YP_003410334.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase; PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: stp:Strop_3320 dihydrolipoyllysine-residue succinyltransferase YP_003410335.1 PFAM: domain of unknown function DUF1731; NAD- dependent epimerase/dehydratase; KEGG: rer:RER_36180 hypothetical protein YP_003410336.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; RIO-like kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: ach:Achl_1600 serine/threonine protein kinase YP_003410337.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: stp:Strop_3418 amine oxidase YP_003410338.1 PFAM: peptidase S51 dipeptidase E; KEGG: stp:Strop_3782 peptidase S51, dipeptidase E YP_003410339.1 KEGG: msm:MSMEG_4285 lipoyltransferase; TIGRFAM: lipoate-protein ligase B; PFAM: biotin/lipoate A/B protein ligase YP_003410340.1 TIGRFAM: leucyl-tRNA synthetase; KEGG: sen:SACE_7373 leucyl-tRNA synthetase YP_003410341.1 KEGG: kra:Krad_3544 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003410342.1 KEGG: SNF2 superfamily protein YP_003410343.1 KEGG: bcv:Bcav_1858 lipoic acid synthetase; TIGRFAM: lipoic acid synthetase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003410344.1 KEGG: sen:SACE_1625 hypothetical protein YP_003410345.1 PFAM: RDD domain containing protein; KEGG: sgr:SGR_5316 hypothetical protein YP_003410346.1 TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: mab:MAB_1933c glutamine synthetase, type I (GlnA1) YP_003410347.1 PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: fra:Francci3_2649 hypothetical protein YP_003410348.1 KEGG: fal:FRAAL5057 hypothetical protein YP_003410350.1 KEGG: rxy:Rxyl_0421 hypothetical protein YP_003410351.1 PFAM: carbon starvation protein CstA; KEGG: kra:Krad_4167 carbon starvation protein CstA YP_003410352.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: rxy:Rxyl_1586 methionine synthase, vitamin- B12 independent YP_003410353.1 KEGG: aau:AAur_3957 hypothetical protein YP_003410354.1 PFAM: protein of unknown function DUF488; KEGG: ace:Acel_0623 hypothetical protein YP_003410355.1 KEGG: GI15829 gene product from transcript GI15829- RA YP_003410356.1 KEGG: ade:Adeh_3797 hypothetical protein YP_003410357.1 PFAM: class II aldolase/adducin family protein; KEGG: tko:TK2132 L-fuculose phosphate aldolase YP_003410358.1 KEGG: sen:SACE_3608 methylthioribose-1-phosphate isomerase; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized protein; PFAM: initiation factor 2B related YP_003410359.1 PFAM: heat shock protein Hsp20; KEGG: ace:Acel_1474 heat shock protein HSP20 YP_003410360.1 TIGRFAM: xanthine dehydrogenase D subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_1261 aldehyde oxidase and xanthine dehydrogenase,molybdopterin binding YP_003410361.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_1263 (2Fe-2S)-binding protein YP_003410362.1 PFAM: molybdopterin dehydrogenase FAD-binding; KEGG: sen:SACE_1264 molybdopterin dehydrogenase, FAD-binding protein YP_003410363.1 KEGG: cyt:cce_0677 hypothetical protein YP_003410364.1 PFAM: 5'-Nucleotidase domain protein; metallophosphoesterase; KEGG: kra:Krad_4541 5'-nucleotidase domain- containing protein YP_003410365.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: mav:MAV_2980 clavaldehyde dehydrogenase YP_003410366.1 KEGG: cmi:CMM_1264 hypothetical protein YP_003410367.1 PFAM: GAF domain protein; chemotaxis sensory transducer; SMART: GAF domain protein; chemotaxis sensory transducer; KEGG: kra:Krad_4261 methyl-accepting chemotaxis sensory transducer YP_003410368.1 PFAM: Iron sulphur domain-containing, CDGSH-type; SMART: zinc finger CDGSH-type domain protein; KEGG: cmi:CMM_1265 hypothetical protein YP_003410369.1 PFAM: GlnD PII-uridylyltransferase; glutamate- ammonia ligase adenylyltransferase; KEGG: ace:Acel_0920 (glutamate--ammonia-ligase) adenylyltransferase YP_003410370.1 PFAM: glutamine amidotransferase class-I; KEGG: stp:Strop_3336 glutamine amidotransferase class-I YP_003410371.1 PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp; KEGG: rer:RER_36490 glutamine synthetase I YP_003410372.1 PFAM: band 7 protein; SMART: band 7 protein; KEGG: mva:Mvan_1071 band 7 protein YP_003410373.1 KEGG: mab:MAB_1001 hypothetical protein YP_003410374.1 KEGG: stp:Strop_3340 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: NAD synthase; Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003410375.1 KEGG: nca:Noca_2042 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_003410376.1 TIGRFAM: NADPH-dependent F420 reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent; KEGG: fre:Franean1_1760 NADPH-dependent F420 reductase YP_003410377.1 KEGG: sco:SCO2265 hypothetical protein YP_003410378.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sen:SACE_6746 hypothetical protein YP_003410379.1 KEGG: kra:Krad_0283 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003410380.1 KEGG: chl:Chy400_0110 Xaa-Pro aminopeptidase family enzyme YP_003410381.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kra:Krad_4204 short-chain dehydrogenase/reductase SDR YP_003410382.1 KEGG: mva:Mvan_2605 hypothetical protein YP_003410384.1 KEGG: krh:KRH_22220 hypothetical protein YP_003410385.1 KEGG: kra:Krad_2455 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein; GAF domain protein YP_003410386.1 PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO7205 hydrolase YP_003410387.1 PFAM: thioesterase superfamily protein; KEGG: sgr:SGR_4854 hypothetical protein YP_003410389.1 KEGG: fre:Franean1_6479 hypothetical protein YP_003410390.1 KEGG: kra:Krad_0034 hypothetical protein YP_003410391.1 KEGG: kra:Krad_3736 hypothetical protein YP_003410392.1 PFAM: Type II secretion system F domain; KEGG: ach:Achl_4446 type II secretion system protein YP_003410393.1 PFAM: Type II secretion system F domain; KEGG: ach:Achl_4445 type II secretion system protein YP_003410394.1 PFAM: type II secretion system protein E; KEGG: ach:Achl_4444 type II secretion system protein E YP_003410395.1 KEGG: art:Arth_2924 Flp pilus assembly protein ATPase CpaE-like protein YP_003410396.1 PFAM: SAF domain protein; KEGG: ach:Achl_4442 hypothetical protein YP_003410397.1 KEGG: ach:Achl_2645 hypothetical protein YP_003410398.1 PFAM: TadE family protein; KEGG: ach:Achl_4440 TadE family protein YP_003410399.1 PFAM: Flp/Fap pilin component; KEGG: ach:Achl_2643 Flp/Fap pilin component YP_003410400.1 PFAM: peptidase A24A prepilin type IV; KEGG: art:Arth_2919 peptidase A24A, prepilin type IV YP_003410402.1 PFAM: conserved hypothetical protein; KEGG: tfu:Tfu_1576 hypothetical protein YP_003410403.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO7350 membrane efflux protein YP_003410404.1 TIGRFAM: drug resistance transporter, Bcr/CflA subfamily; PFAM: major facilitator superfamily MFS_1; General substrate transporter; KEGG: kra:Krad_1904 Bcr/CflA subfamily drug resistance transporter YP_003410405.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; HI0933 family protein; KEGG: saq:Sare_3651 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003410406.1 PFAM: protein of unknown function UPF0061; KEGG: kra:Krad_1790 hypothetical protein YP_003410407.1 PFAM: ANTAR domain protein; KEGG: kra:Krad_4477 response regulator receiver/ANTAR domain-containing protein YP_003410408.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: ATP-binding region ATPase domain protein; KEGG: rha:RHA1_ro05772 hypothetical protein YP_003410409.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ace:Acel_1760 two component LuxR family transcriptional regulator YP_003410410.1 PFAM: coenzyme A transferase; KEGG: tmz:Tmz1t_0549 coenzyme A transferase YP_003410412.1 PFAM: Citrate transporter; KEGG: avn:Avin_13910 integral membrane permease/GntP family/citrate transporter YP_003410413.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: sgr:SGR_4169 hypothetical protein YP_003410415.1 SMART: WD-40 repeat protein; KEGG: npu:Npun_F1222 WD-40 repeat-containing protein YP_003410417.1 KEGG: art:Arth_1421 hypothetical protein YP_003410418.1 KEGG: ach:Achl_4562 LSR2-like protein YP_003410419.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase YP_003410420.1 PFAM: WD40 repeat, subgroup; SMART: WD-40 repeat protein; KEGG: npu:Npun_F1222 WD-40 repeat-containing protein YP_003410421.1 PFAM: LmbE family protein; KEGG: rer:RER_27480 hypothetical protein YP_003410422.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: tfu:Tfu_1723 hypothetical protein YP_003410423.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; O-methyltransferase family 2; KEGG: sco:SCO5895 methyltransferase YP_003410424.1 KEGG: pna:Pnap_0222 putative esterase YP_003410425.1 KEGG: mlu:Mlut_09920 predicted membrane protein YP_003410426.1 PFAM: protein of unknown function DUF81; KEGG: saq:Sare_3594 hypothetical protein YP_003410428.1 TIGRFAM: quinolinate synthetase complex, A subunit; PFAM: Quinolinate synthetase A; KEGG: mjl:Mjls_3085 quinolinate synthetase YP_003410429.1 PFAM: Phosphoglycerate mutase; ribonuclease H; KEGG: tfu:Tfu_1953 bifunctional RNase H/acid phosphatase YP_003410430.1 PFAM: protein of unknown function DUF164; KEGG: stp:Strop_3356 hypothetical protein YP_003410431.1 KEGG: saq:Sare_0724 Na+/solute symporter YP_003410432.1 PFAM: protein of unknown function DUF34; KEGG: sen:SACE_1582 NGG1-interacting factor 3 YP_003410433.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tfu:Tfu_0801 acetyltransferase YP_003410434.1 PFAM: protein of unknown function DUF893 YccS/YhfK; KEGG: sma:SAV_4408 integral membrane protein YP_003410435.1 PFAM: alpha/beta hydrolase fold; KEGG: fra:Francci3_0625 alpha/beta hydrolase fold YP_003410436.1 TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: sen:SACE_6439 hypothetical protein YP_003410437.1 PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: mkm:Mkms_4590 NAD-dependent epimerase/dehydratase YP_003410438.1 PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro04501 hydrolase YP_003410439.1 PFAM: PGAP1 family protein; KEGG: mbt:JTY_1227 hypothetical protein YP_003410440.1 KEGG: sen:SACE_4970 transposase YP_003410441.1 PFAM: Tetratricopeptide TPR_4; TPR repeat- containing protein; SMART: Tetratricopeptide repeat; KEGG: ade:Adeh_3415 TPR repeat-containing protein YP_003410443.1 KEGG: cyp:PCC8801_2272 GUN4 domain protein YP_003410447.1 KEGG: kra:Krad_4657 hypothetical protein YP_003410448.1 KEGG: scl:sce3805 hypothetical protein YP_003410449.1 PFAM: NB-ARC domain protein; TPR repeat-containing protein; Tetratricopeptide TPR_4; Tetratricopeptide TPR_2 repeat protein; SMART: Tetratricopeptide repeat; KEGG: scl:sce3803 putative ATP/GTP-binding protein YP_003410450.1 KEGG: SORBIDRAFT_03g029150; hypothetical protein YP_003410451.1 PFAM: conserved hypothetical protein; KEGG: bbt:BBta_3620 hypothetical protein YP_003410455.1 KEGG: mgi:Mflv_1980 hypothetical protein YP_003410458.1 KEGG: gur:Gura_0798 hypothetical protein YP_003410460.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: cjk:jk1225 hypothetical protein YP_003410461.1 SMART: helix-turn-helix domain protein; KEGG: fre:Franean1_3750 helix-turn-helix domain- containing protein YP_003410462.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: kra:Krad_0786 short-chain dehydrogenase/reductase SDR YP_003410464.1 PFAM: integrase family protein; KEGG: sen:SACE_5094 phage integrase family site specific recombinase YP_003410465.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Redoxin domain protein; KEGG: sen:SACE_1534 AhpC/TSA family protein YP_003410466.1 KEGG: ace:Acel_0882 hypothetical protein YP_003410467.1 TIGRFAM: 2-oxo-acid dehydrogenase E1 subunit, homodimeric type; KEGG: saq:Sare_3613 pyruvate dehydrogenase subunit E1 YP_003410468.1 PFAM: FAD dependent oxidoreductase; KEGG: rxy:Rxyl_0526 D-amino acid oxidase YP_003410469.1 KEGG: sal:Sala_2314 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003410470.1 KEGG: syf:Synpcc7942_1696 hypothetical protein YP_003410471.1 PFAM: phosphoesterase PA-phosphatase related; SMART: phosphoesterase PA-phosphatase related; KEGG: sgr:SGR_3158 hypothetical protein YP_003410472.1 KEGG: stp:Strop_3377 hypothetical protein YP_003410473.1 PFAM: Acyl transferase; biotin/lipoyl attachment domain-containing protein; KEGG: saq:Sare_3620 acyl transferase YP_003410474.1 KEGG: tfu:Tfu_1974 3-oxoacyl-(acyl carrier protein) synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; 3-Oxoacyl-[acyl-carrier- protein (ACP)] synthase III YP_003410475.1 TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding; KEGG: fal:FRAAL5670 acyl carrier protein YP_003410476.1 PFAM: Beta-ketoacyl synthase; KEGG: stp:Strop_3381 beta-ketoacyl synthase YP_003410477.1 PFAM: carboxyl transferase; KEGG: stp:Strop_3382 propionyl-CoA carboxylase YP_003410478.1 KEGG: saq:Sare_3627 hypothetical protein YP_003410479.1 KEGG: kra:Krad_0437 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003410480.1 KEGG: stp:Strop_3113 mycothiol-dependent maleylpyruvate isomerase YP_003410481.1 PFAM: Peptidase M23; KEGG: sen:SACE_5687 membrane proteins related to metalloendopeptidases YP_003410482.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_2740 periplasmic phosphate binding protein YP_003410483.1 PFAM: integrase family protein; KEGG: nfa:nfa7110 putative phage integrase YP_003410484.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: nca:Noca_0561 DNA binding domain-containing protein YP_003410485.1 KEGG: mgi:Mflv_5225 hypothetical protein YP_003410486.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: kra:Krad_3545 hypothetical protein YP_003410487.1 PFAM: AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: kra:Krad_2862 ATPase central domain- containing protein YP_003410488.1 KEGG: sen:SACE_4970 transposase YP_003410489.1 PFAM: transposase IS116/IS110/IS902 family protein; KEGG: rha:RHA1_ro10031 transposase YP_003410490.1 KEGG: rha:RHA1_ro10149 transposase YP_003410491.1 PFAM: transposase IS4 family protein; KEGG: sco:SCO3470 transposase YP_003410492.1 KEGG: msm:MSMEG_6589 ISMsm5, transposase YP_003410493.1 KEGG: rop:ROP_47020 aldolase YP_003410494.1 PFAM: aldo/keto reductase; KEGG: sen:SACE_4555 aldo/keto reductase YP_003410495.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: nca:Noca_1661 hypothetical protein YP_003410496.1 PFAM: Polyketide cyclase/dehydrase; cyclase/dehydrase; Activator of Hsp90 ATPase 1 family protein; KEGG: afr:AFE_2804 hypothetical protein YP_003410497.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: sco:SCO0419 zinc-binding oxidoreductase YP_003410498.1 KEGG: sma:SAV_489 hypothetical protein YP_003410499.1 KEGG: amr:AM1_6084 hypothetical protein YP_003410501.1 KEGG: sma:SAV_934 ABC transporter integral membrane protein YP_003410502.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_933 ABC transporter ATP-binding protein YP_003410503.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: fra:Francci3_1975 tetracyclin repressor-like YP_003410504.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rha:RHA1_ro02951 oxidoreductase, Zn-binding YP_003410505.1 KEGG: tfu:Tfu_3024 transmembrane protein YP_003410506.1 PFAM: alpha/beta hydrolase fold; Thioesterase; KEGG: gme:Gmet_1468 alpha/beta hydrolase fold YP_003410507.1 PFAM: transposase IS4 family protein; KEGG: fra:Francci3_2546 transposase YP_003410509.1 KEGG: sen:SACE_2570 hypothetical protein YP_003410512.1 KEGG: sen:SACE_1798 hypothetical protein YP_003410513.1 PFAM: VanW family protein; KEGG: rha:RHA1_ro05201 hypothetical protein YP_003410514.1 PFAM: ribonuclease BN; KEGG: rop:ROP_68020 hypothetical membrane protein YP_003410515.1 KEGG: saq:Sare_1437 hypothetical protein YP_003410516.1 PFAM: Indigoidine synthase A family protein; KEGG: saq:Sare_1436 indigoidine synthase A family protein YP_003410517.1 PFAM: PfkB domain protein; KEGG: saq:Sare_1435 ribokinase-like domain- containing protein YP_003410518.1 KEGG: nfa:nfa37720 hypothetical protein YP_003410519.1 TIGRFAM: HhH-GPD family protein; PFAM: HhH-GPD family protein; KEGG: sma:SAV_4172 hypothetical protein YP_003410520.1 KEGG: mab:MAB_2534c hypothetical protein YP_003410521.1 TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; KEGG: saq:Sare_1427 D-tyrosyl-tRNA(Tyr) deacylase YP_003410522.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 region 4 domain protein; KEGG: mjl:Mjls_2166 RNA polymerase sigma factor SigB YP_003410523.1 PFAM: CoA-binding domain protein; GCN5-related N- acetyltransferase; KEGG: sen:SACE_1780 acetyl-CoA synthetase YP_003410524.1 PFAM: histone deacetylase superfamily; KEGG: sen:SACE_1779 acetoin dehydrogenase YP_003410525.1 PFAM: iron dependent repressor; SMART: iron dependent repressor; KEGG: nca:Noca_0779 iron dependent repressor YP_003410526.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; WD40 domain protein beta Propeller; KEGG: ace:Acel_1406 peptidase S9 prolyl oligopeptidase YP_003410527.1 PFAM: Resolvase domain; Recombinase; KEGG: bcv:Bcav_2519 resolvase domain protein YP_003410531.1 KEGG: nfa:nfa14930 hypothetical protein YP_003410533.1 KEGG: hypothetical protein YP_003410538.1 KEGG: nar:Saro_0649 phage major capsid protein, HK97 YP_003410539.1 KEGG: tfu:Tfu_0260 hypothetical protein YP_003410540.1 KEGG: rsa:RSal33209_2839 putative lipoprotein YP_003410541.1 KEGG: sgr:SGR_382 hypothetical protein YP_003410543.1 PFAM: protein of unknown function DUF1211; KEGG: rxy:Rxyl_2895 hypothetical protein YP_003410545.1 KEGG: stp:Strop_4534 hypothetical protein YP_003410546.1 KEGG: hypothetical protein YP_003410547.1 PFAM: Stress responsive alpha-beta barrel domain protein; KEGG: tfu:Tfu_0763 hypothetical protein YP_003410548.1 PFAM: glycosyl transferase group 1; KEGG: rop:ROP_47540 putative glycosyltransferase YP_003410549.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: sco:SCO2317 methyltransferase YP_003410550.1 KEGG: tfu:Tfu_0571 hypothetical protein YP_003410551.1 PFAM: glycosyl transferase family 2; KEGG: rxy:Rxyl_0477 glycosyl transferase family protein YP_003410552.1 PFAM: glycosyl transferase family 2; KEGG: sco:SCO6190 transferase YP_003410553.1 KEGG: fal:FRAAL6492 hypothetical protein YP_003410554.1 KEGG: sgr:SGR_5196 hypothetical protein YP_003410555.1 PFAM: YibE/F family protein; KEGG: aau:AAur_1485 YibE/F-like family protein YP_003410556.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mjl:Mjls_3336 anti-sigma-factor antagonist YP_003410557.1 PFAM: heat shock protein Hsp20; KEGG: ace:Acel_0609 heat shock protein HSP20 YP_003410558.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sen:SACE_3658 MerR family transcriptional regulator YP_003410559.1 PFAM: protein of unknown function DUF156; KEGG: rop:ROP_33320 hypothetical protein YP_003410560.1 PFAM: Heavy metal transport/detoxification protein; KEGG: rop:ROP_33290 putative copper chaperone CopZ YP_003410561.1 KEGG: nfa:nfa1610 hypothetical protein YP_003410562.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: tfu:Tfu_2848 ATPase, E1-E2 type:copper- translocating P-type ATPase:heavy metal translocating P- type ATPase YP_003410563.1 KEGG: stp:Strop_1182 hypothetical protein YP_003410564.1 PFAM: Epoxide hydrolase domain protein; alpha/beta hydrolase fold; KEGG: sen:SACE_3441 epoxide hydrolase YP_003410565.1 PFAM: peptidase M48 Ste24p; peptidase M56 BlaR1; KEGG: rsa:RSal33209_2422 heat shock protein YP_003410566.1 PFAM: Penicillinase repressor; KEGG: rsa:RSal33209_2421 MecI family transcriptional regulator YP_003410567.1 PFAM: cytochrome bd ubiquinol oxidase subunit I; KEGG: art:Arth_1622 cytochrome bd ubiquinol oxidase, subunit I YP_003410568.1 TIGRFAM: cytochrome d ubiquinol oxidase, subunit II; PFAM: cytochrome bd ubiquinol oxidase subunit II; KEGG: aau:AAur_1769 cytochrome d ubiquinol oxidase, subunit II YP_003410569.1 KEGG: ach:Achl_1618 ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; TIGRFAM: ABC transporter, CydDC cysteine exporter (CydDC-E) family, permease/ATP-binding protein CydC; PFAM: ABC transporter related; SMART: AAA ATPase YP_003410571.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: kra:Krad_2685 deaminase-reductase domain- containing protein YP_003410572.1 TIGRFAM: regulator of ribonuclease activity A; PFAM: Dimethylmenaquinone methyltransferase; KEGG: csa:Csal_2060 ribonuclease activity regulator protein RraA YP_003410573.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: kra:Krad_2488 3-isopropylmalate dehydrogenase YP_003410574.1 PFAM: Aldehyde Dehydrogenase; KEGG: rha:RHA1_ro00658 succinate-semialdehyde dehydrogenase (NAD(P)+) YP_003410575.1 PFAM: Cupin 2 conserved barrel domain protein; Cupin domain protein; KEGG: rhi:NGR_c25840 hypothetical protein YP_003410576.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: rha:RHA1_ro00657 hypothetical protein YP_003410577.1 PFAM: Malate/L-lactate dehydrogenase; KEGG: rha:RHA1_ro00656 dehydrogenase YP_003410578.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: rop:ROP_52900 putative GntR family transcriptional regulator YP_003410579.1 PFAM: UspA domain protein; KEGG: art:Arth_1392 UspA domain-containing protein YP_003410580.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: sco:SCO1136 two component system response regulator YP_003410581.1 PFAM: ATP-binding region ATPase domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein; KEGG: art:Arth_1396 signal transduction histidine kinase regulating citrate/malate metabolism YP_003410582.1 PFAM: conserved hypothetical protein; KEGG: ach:Achl_0596 hypothetical protein YP_003410583.1 KEGG: art:Arth_1394 integral membrane protein YP_003410584.1 PFAM: protein of unknown function DUF112 transmembrane; KEGG: art:Arth_1393 hypothetical protein YP_003410585.1 KEGG: mbt:JTY_0035 hypothetical protein YP_003410586.1 PFAM: Ethanolamine ammonia-lyase light chain; KEGG: sma:SAV_4545 ethanolamine ammonia-lyase small subunit YP_003410587.1 PFAM: Ethanolamine ammonia lyase large subunit; KEGG: nfa:nfa21870 putative ethanolamine ammonia- lyase large subunit YP_003410588.1 TIGRFAM: ethanolamine transproter; PFAM: amino acid permease-associated region; KEGG: mjl:Mjls_4869 ethanolamine transproter YP_003410589.1 PFAM: ANTAR domain protein; GAF domain protein; SMART: GAF domain protein; KEGG: sgr:SGR_6451 hypothetical protein YP_003410590.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: mjl:Mjls_0410 short-chain dehydrogenase/reductase SDR YP_003410591.1 KEGG: rha:RHA1_ro00122 hypothetical protein YP_003410592.1 KEGG: ach:Achl_3743 hypothetical protein YP_003410593.1 PFAM: Protein of unknown function DUF2277; KEGG: nca:Noca_0782 hypothetical protein YP_003410594.1 KEGG: kra:Krad_0814 hypothetical protein YP_003410595.1 KEGG: mjl:Mjls_2280 hypothetical protein YP_003410596.1 KEGG: fal:FRAAL3296 hypothetical protein YP_003410597.1 KEGG: kra:Krad_4414 DNA mismatch endonuclease vsr YP_003410598.1 KEGG: stp:Strop_3705 hypothetical protein YP_003410599.1 KEGG: aau:AAur_0311 phenylalanyl-tRNA synthetase domain-containing protein YP_003410600.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: fal:FRAAL3381 hypothetical protein YP_003410601.1 PFAM: glycosyl transferase family 2; KEGG: pap:PSPA7_5538 putative glycosyl transferase YP_003410602.1 PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; KEGG: ade:Adeh_4299 NAD-dependent epimerase/dehydratase YP_003410603.1 KEGG: vei:Veis_3054 HpcH/HpaI aldolase YP_003410604.1 PFAM: ABC transporter related; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: fre:Franean1_5338 ABC transporter related YP_003410605.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fra:Francci3_1591 binding-protein-dependent transport systems inner membrane component YP_003410606.1 PFAM: extracellular solute-binding protein family 1; KEGG: fre:Franean1_5340 extracellular solute- binding protein YP_003410607.1 PFAM: GCN5-related N-acetyltransferase; KEGG: kra:Krad_4118 GCN5-related N- acetyltransferase YP_003410608.1 PFAM: rhodopsin; KEGG: kra:Krad_1795 rhodopsin YP_003410609.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: scl:sce6417 ECF subfamily RNA polymerase sigma factor YP_003410610.1 PFAM: YCII-related; KEGG: vap:Vapar_1458 YCII-related YP_003410611.1 KEGG: rop:ROP_15420 hypothetical protein YP_003410612.1 PFAM: thioesterase superfamily protein; KEGG: ppd:Ppro_1137 hypothetical protein YP_003410613.1 PFAM: FAD linked oxidase domain protein; Berberine/berberine domain protein; KEGG: sen:SACE_7272 FAD linked oxidase-like YP_003410614.1 KEGG: mpa:MAP0634c hypothetical protein YP_003410615.1 KEGG: sma:SAV_2599 hypothetical protein YP_003410616.1 KEGG: mgi:Mflv_1042 hypothetical protein YP_003410618.1 PFAM: NUDIX hydrolase; KEGG: bcv:Bcav_0671 NUDIX hydrolase YP_003410619.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: bbr:BB4306 putative enoyl-CoA hydratase/isomerase family protein YP_003410620.1 KEGG: mkm:Mkms_0818 putative DNA helicase YP_003410621.1 KEGG: mgi:Mflv_5200 PilT domain-containing protein YP_003410622.1 KEGG: sen:SACE_5827 hypothetical protein YP_003410623.1 PFAM: tyrosine protein kinase; aminoglycoside phosphotransferase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: fre:Franean1_2371 serine/threonine protein kinase YP_003410625.1 KEGG: fre:Franean1_7000 hypothetical protein YP_003410626.1 KEGG: ank:AnaeK_3854 tetratricopeptide TPR_2 repeat protein YP_003410628.1 PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-2 domain protein; Phytochrome central region domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: kra:Krad_1986 putative GAF sensor protein YP_003410629.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: mva:Mvan_3003 anti-sigma-factor antagonist YP_003410630.1 PFAM: ATP-binding region ATPase domain protein; KEGG: fra:Francci3_4415 putative serine/threonine kinase anti-sigma factor YP_003410631.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: cms:CMS_0018 serine/threonine kinase YP_003410632.1 PFAM: protein of unknown function UPF0027; KEGG: kra:Krad_1410 hypothetical protein YP_003410633.1 PFAM: Cupin 2 conserved barrel domain protein; protein of unknown function DUF861 cupin_3; KEGG: sen:SACE_3306 hypothetical protein YP_003410634.1 KEGG: sma:SAV_4787 anti-sigma factor antagonist YP_003410635.1 TIGRFAM: F420-dependent oxidoreductase, G6PDH family; PFAM: Luciferase-like, subgroup; KEGG: sgr:SGR_6674 putative dehydrogenase YP_003410636.1 PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: rha:RHA1_ro06693 5-valerolactone hydrolase YP_003410638.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: sen:SACE_1944 D-isomer specific 2-hydroxyacid dehydrogenase family protein YP_003410641.1 KEGG: ana:alr5320 hypothetical protein YP_003410642.1 PFAM: NUDIX hydrolase; KEGG: mjl:Mjls_0850 NUDIX hydrolase YP_003410643.1 PFAM: ADP-ribosylation/Crystallin J1; Dual specificity protein phosphatase; SMART: Dual specificity phosphatase, subgroup, catalytic domain; KEGG: kra:Krad_4406 ADP-ribosylation/crystallin J1 YP_003410645.1 PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region; KEGG: cyb:CYB_1056 HD domain-containing protein YP_003410646.1 PFAM: PfkB domain protein; KEGG: sen:SACE_1230 sugar kinase, phosphofructokinase YP_003410647.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sen:SACE_7076 response regulator/thioredoxin- disulfide reductase YP_003410648.1 KEGG: aau:AAur_2059 hypothetical protein YP_003410649.1 KEGG: bpy:Bphyt_5095 hypothetical protein YP_003410650.1 KEGG: gvi:gsr1677 hypothetical protein YP_003410651.1 PFAM: PilT protein domain protein; KEGG: rpc:RPC_4151 PilT protein-like YP_003410652.1 TIGRFAM: RecB family nuclease, putative; KEGG: tgr:Tgr7_1784 hypothetical protein YP_003410653.1 KEGG: msl:Msil_3485 hypothetical protein YP_003410654.1 PFAM: PilT protein domain protein; KEGG: mgi:Mflv_5200 PilT domain-containing protein YP_003410655.1 KEGG: mjl:Mjls_3011 hypothetical protein YP_003410656.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: vap:Vapar_2852 cupin 2 conserved barrel domain protein YP_003410657.1 KEGG: mab:MAB_4131 hypothetical protein YP_003410658.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: cyn:Cyan7425_5372 endonuclease/exonuclease/phosphatase YP_003410659.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: ddr:Deide_02070 hypothetical protein YP_003410661.1 KEGG: scl:sce5793 hypothetical protein YP_003410662.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sgr:SGR_6657 putative alcohol dehydrogenase YP_003410663.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: sen:SACE_3354 hypothetical protein YP_003410664.1 PFAM: PemK family protein; KEGG: mtb:TBMG_01918 toxin YP_003410666.1 KEGG: mkm:Mkms_0863 hypothetical protein YP_003410667.1 TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; KEGG: aau:AAur_0707 addiction module toxin, RelE/StbE YP_003410668.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: rop:ROP_35880 hypothetical protein YP_003410669.1 KEGG: fra:Francci3_0353 hypothetical protein YP_003410670.1 KEGG: fre:Franean1_7173 hypothetical protein YP_003410672.1 KEGG: ach:Achl_4088 hypothetical protein YP_003410673.1 KEGG: rha:RHA1_ro10457 hypothetical protein YP_003410674.1 KEGG: sgr:SGR_3842 hypothetical protein YP_003410676.1 KEGG: bac:BamMC406_4942 regulatory protein ArsR YP_003410677.1 KEGG: gvi:gll2160 hypothetical protein YP_003410678.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: rxy:Rxyl_1595 hypothetical protein YP_003410679.1 TIGRFAM: death-on-curing family protein; PFAM: filamentation induced by cAMP protein Fic; KEGG: nca:Noca_3660 death-on-curing family protein YP_003410680.1 PFAM: CopG domain protein DNA-binding domain protein; KEGG: nca:Noca_3661 CopG/DNA-binding domain- containing protein YP_003410681.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: ach:Achl_4428 hypothetical protein YP_003410682.1 KEGG: bcv:Bcav_3246 hypothetical protein YP_003410684.1 KEGG: amr:AM1_0877 hypothetical protein YP_003410685.1 PFAM: Endonuclease/exonuclease/phosphatase YP_003410686.1 KEGG: saq:Sare_0975 hypothetical protein YP_003410687.1 KEGG: bad:BAD_1278 filamentous haemagglutinin YP_003410688.1 PFAM: type III restriction protein res subunit; helicase domain protein; SMART: helicase domain protein; DEAD-like helicase; KEGG: nca:Noca_3809 type III restriction enzyme, res subunit YP_003410689.1 PFAM: UvrD/REP helicase; KEGG: mva:Mvan_6025 UvrD/REP helicase YP_003410690.1 PFAM: Protein of unknown function DUF1998; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: saq:Sare_3086 helicase superfamily protein YP_003410691.1 KEGG: saq:Sare_3087 hypothetical protein YP_003410692.1 PFAM: helicase domain protein; SNF2-related protein; type III restriction protein res subunit; SMART: DEAD-like helicase ; helicase domain protein; KEGG: saq:Sare_3088 helicase domain-containing protein YP_003410693.1 KEGG: mjl:Mjls_2385 hypothetical protein YP_003410694.1 TIGRFAM: polyhydroxyalkanoate depolymerase, intracellular; PFAM: PHB de-polymerase domain protein; KEGG: bch:Bcen2424_3731 polyhydroxyalkanoate depolymerase, intracellular YP_003410695.1 KEGG: rha:RHA1_ro04016 hypothetical protein YP_003410696.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rop:ROP_23620 putative fatty-acid--CoA ligase YP_003410697.1 KEGG: bbe:BBR47_03190 hypothetical protein YP_003410698.1 KEGG: tpd:Teth39_1563 DNA polymerase beta subunit YP_003410699.1 KEGG: sen:SACE_7137 diguanylate cyclase/phosphodiesterase; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; PAS fold-3 domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein; PAS domain containing protein YP_003410700.1 PFAM: protein of unknown function DUF574; Methyltransferase type 12; KEGG: sco:SCO0929 hypothetical protein YP_003410701.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: mgi:Mflv_3019 prevent-host-death family protein YP_003410702.1 KEGG: mgi:Mflv_3210 PilT domain-containing protein YP_003410703.1 PFAM: ABC-1 domain protein; KEGG: saq:Sare_4117 hypothetical protein YP_003410704.1 KEGG: rxy:Rxyl_2639 hypothetical protein YP_003410706.1 KEGG: mucin-associated surface protein (MASP) YP_003410707.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: hma:rrnAC0102 2-nitropropane dioxygenase- related protein YP_003410708.1 KEGG: mva:Mvan_5988 hypothetical protein YP_003410709.1 KEGG: ach:Achl_0333 peptidase S9 prolyl oligopeptidase active site domain protein YP_003410710.1 PFAM: filamentation induced by cAMP protein Fic; KEGG: cur:cur_0079 hypothetical protein YP_003410712.1 PFAM: alpha/beta hydrolase fold; KEGG: noc:Noc_1448 alpha/beta hydrolase fold YP_003410713.1 KEGG: rha:RHA1_ro00354 hypothetical protein YP_003410714.1 PFAM: glycosyl transferase family 51; KEGG: rer:RER_25000 glycosyltransferase YP_003410715.1 KEGG: mth:MTH1540 hypothetical protein YP_003410716.1 KEGG: mth:MTH1540 hypothetical protein YP_003410718.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: dau:Daud_0559 thioredoxin reductase YP_003410719.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: bbt:BBta_7534 putative acyl-CoA dehydrogenase YP_003410720.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rer:RER_49270 acyl-CoA dehydrogenase YP_003410721.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rha:RHA1_ro09031 enoyl-CoA hydratase YP_003410722.1 PFAM: CoA-binding domain protein; KEGG: bpy:Bphyt_4084 CoA-binding domain protein YP_003410723.1 PFAM: regulatory protein TetR; KEGG: nca:Noca_4111 regulatory protein, TetR YP_003410724.1 PFAM: fumarylacetoacetate (FAA) hydrolase; Domain of unknown function DUF2437; KEGG: sma:SAV_2692 2-keto-4-pentenoate hydratase/2- oxohepta-3-ene-1,7-dioic acid hydratase YP_003410725.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: bcl:ABC0368 3-oxoacyl-[acyl-carrier-protein] reductase YP_003410726.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: hla:Hlac_2584 fumarylacetoacetate (FAA) hydrolase YP_003410727.1 PFAM: dihydrodipicolinate synthetase; KEGG: sus:Acid_3645 dihydrodipicolinate synthetase YP_003410728.1 PFAM: FAD dependent oxidoreductase; KEGG: mgi:Mflv_3531 FAD dependent oxidoreductase YP_003410730.1 KEGG: KIAA0754; hypothetical LOC643314 YP_003410731.1 KEGG: art:Arth_4231 hypothetical protein YP_003410732.1 PFAM: HNH endonuclease; SMART: HNH nuclease; KEGG: fal:FRAAL5813 hypothetical protein YP_003410733.1 KEGG: nar:Saro_2815 6-phosphogluconate dehydrogenase, NAD-binding YP_003410734.1 PFAM: Dimethylmenaquinone methyltransferase; KEGG: reh:H16_B1818 demethylmenaquinone methyltransferase YP_003410735.1 PFAM: major facilitator superfamily MFS_1; KEGG: rxy:Rxyl_2414 major facilitator transporter YP_003410736.1 PFAM: Malate/L-lactate dehydrogenase; isocitrate/isopropylmalate dehydrogenase; KEGG: kol:Kole_0933 malate dehydrogenase YP_003410737.1 KEGG: rxy:Rxyl_0202 hypothetical protein YP_003410738.1 TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; KEGG: msm:MSMEG_0984 trap transporter, 4tm/12tm fusion protein YP_003410739.1 KEGG: gtn:GTNG_2976 hypothetical protein YP_003410740.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; KEGG: pnu:Pnuc_0468 TRAP transporter solute receptor TAXI family protein YP_003410741.1 PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH; KEGG: sco:SCO6565 transcriptional regulator YP_003410742.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: cyn:Cyan7425_1650 short-chain dehydrogenase/reductase SDR YP_003410743.1 PFAM: major facilitator superfamily MFS_1; KEGG: chl:Chy400_3866 major facilitator superfamily MFS_1 YP_003410744.1 PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: pol:Bpro_5571 L-carnitine dehydratase/bile acid-inducible protein F YP_003410745.1 PFAM: peptidase S9 prolyl oligopeptidase active site domain protein; KEGG: kra:Krad_3393 peptidase S9 prolyl oligopeptidase YP_003410746.1 PFAM: Protein of unknown function DUF1810; KEGG: pmy:Pmen_2192 hypothetical protein YP_003410747.1 KEGG: mjl:Mjls_4857 putative glutathione S- transferase YP_003410748.1 PFAM: Excalibur domain protein; KEGG: sgr:SGR_4658 hypothetical protein YP_003410750.1 KEGG: nca:Noca_3719 hypothetical protein YP_003410752.1 PFAM: Threonyl/alanyl tRNA synthetase SAD; KEGG: tro:trd_1793 alanyl-tRNA synthetase YP_003410753.1 KEGG: mbt:JTY_2575 hypothetical protein YP_003410754.1 KEGG: mbt:JTY_2574 hypothetical protein YP_003410755.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: bbt:BBta_7534 putative acyl-CoA dehydrogenase YP_003410756.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: nfa:nfa33810 putative acyl-CoA dehydrogenase YP_003410757.1 KEGG: DKEY-180H12.2; similar to mitogen-activated protein kinase 8 interacting protein 2 isoform 3 YP_003410758.1 KEGG: ace:Acel_1882 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-4 domain protein; GAF domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; PAS domain containing protein YP_003410759.1 PFAM: alpha/beta hydrolase fold; KEGG: sco:SCO3690 hydrolase YP_003410760.1 KEGG: nfa:nfa6880 hypothetical protein YP_003410762.1 KEGG: fal:FRAAL6818 hypothetical protein YP_003410763.1 KEGG: saq:Sare_1552 hypothetical protein YP_003410764.1 KEGG: bay:RBAM_011070 CypC YP_003410765.1 KEGG: msm:MSMEG_1265 hypothetical protein YP_003410766.1 KEGG: rci:RRC32 hypothetical protein YP_003410767.1 PFAM: protein of unknown function DUF1206; KEGG: bcv:Bcav_2650 protein of unknown function DUF1206 YP_003410768.1 PFAM: protein of unknown function DUF1206; KEGG: bcv:Bcav_2650 protein of unknown function DUF1206 YP_003410769.1 PFAM: Protein of unknown function DUF2254, membrane; KEGG: mmi:MMAR_2975 hypothetical protein YP_003410770.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: fre:Franean1_3927 short-chain dehydrogenase/reductase SDR YP_003410771.1 KEGG: sen:SACE_4011 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003410772.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_4522 major facilitator superfamily multidrug resistance protein YP_003410773.1 KEGG: sgr:SGR_1182 putative branched-chain amino acid ABC transporter substrate-binding protein YP_003410774.1 PFAM: inner-membrane translocator; KEGG: sco:SCO0707 branched-chain amino acid ABC transport permease YP_003410775.1 PFAM: inner-membrane translocator; KEGG: sgr:SGR_1184 putative branched-chain amino acid ABC transporter permease protein YP_003410776.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO0709 branched-chain amino acid transport ATP-binding protein YP_003410777.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_6164 branched-chain amino acid ABC transporter ATP-binding protein YP_003410778.1 TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: bcv:Bcav_0628 anti-sigma-factor antagonist YP_003410780.1 KEGG: msm:MSMEG_1646 ribosomal RNA adenine dimethylase family protein YP_003410781.1 KEGG: sco:SCO4331 hypothetical protein YP_003410782.1 PFAM: protein of unknown function DUF344; KEGG: fal:FRAAL4412 hypothetical protein YP_003410783.1 PFAM: Aldehyde Dehydrogenase; KEGG: nca:Noca_1053 aldehyde dehydrogenase YP_003410784.1 PFAM: glucose-methanol-choline oxidoreductase; GMC oxidoreductase; KEGG: rce:RC1_1588 alcohol dehydrogenase (acceptor) YP_003410786.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_2072 putative integral membrane transport protein YP_003410787.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: rop:ROP_36180 putative AraC family transcriptional regulator YP_003410788.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: kra:Krad_1242 DEAD/DEAH box helicase domain- containing protein YP_003410789.1 KEGG: sco:SCO0850 membrane protein YP_003410790.1 PFAM: blue (type 1) copper domain protein; KEGG: fre:Franean1_4075 hypothetical protein YP_003410791.1 PFAM: Xylose isomerase domain protein TIM barrel; AP endonuclease 2 domain protein; KEGG: bcv:Bcav_1355 xylose isomerase domain protein TIM barrel YP_003410792.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: bcv:Bcav_1354 oxidoreductase domain protein YP_003410793.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: bcv:Bcav_1353 periplasmic binding protein/LacI transcriptional regulator YP_003410794.1 PFAM: inner-membrane translocator; KEGG: kra:Krad_3727 monosaccharide-transporting ATPase YP_003410795.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: kra:Krad_3726 ABC transporter-related protein YP_003410796.1 PFAM: ROK family protein; KEGG: rsa:RSal33209_0161 transcriptional regulator/sugar kinase YP_003410797.1 KEGG: rxy:Rxyl_2437 alpha/beta hydrolase fold YP_003410798.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fal:FRAAL1622 NADH dehydrogenase YP_003410799.1 PFAM: phospholipase/Carboxylesterase; KEGG: mno:Mnod_1773 phospholipase/carboxylesterase YP_003410800.1 PFAM: Erythromycin esterase; KEGG: art:Arth_2047 erythromycin esterase YP_003410801.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: cyn:Cyan7425_0445 short-chain dehydrogenase/reductase SDR YP_003410802.1 KEGG: dsh:Dshi_1749 carboxylate-amine ligase YP_003410803.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: dge:Dgeo_0572 alpha amylase, catalytic region YP_003410804.1 PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein; KEGG: sen:SACE_3492 peptidase S1 and S6, chymotrypsin/Hap YP_003410805.1 KEGG: nfa:nfa1410 hypothetical protein; TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; SMART: GGDEF domain containing protein YP_003410806.1 PFAM: FAD dependent oxidoreductase; KEGG: fre:Franean1_6664 FAD dependent oxidoreductase YP_003410807.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kra:Krad_0867 acetoin dehydrogenase YP_003410808.1 PFAM: SCP-like extracellular; KEGG: bcv:Bcav_2115 SCP-like extracellular YP_003410810.1 PFAM: Helix-turn-helix type 11 domain protein; regulatory protein DeoR; protein of unknown function UPF0074; KEGG: nfa:nfa32250 putative transcriptional regulator YP_003410811.1 PFAM: protein of unknown function DUF664; KEGG: sco:SCO4371 hypothetical protein YP_003410812.1 KEGG: nfa:nfa6330 hypothetical protein YP_003410813.1 PFAM: Activator of Hsp90 ATPase 1 family protein; Polyketide cyclase/dehydrase; KEGG: bmj:BMULJ_05205 hypothetical protein YP_003410814.1 PFAM: aldo/keto reductase; KEGG: rer:RER_45870 NADPH-dependent L- glyceraldehyde 3-phosphate reductase YP_003410815.1 KEGG: rha:RHA1_ro08571 hypothetical protein YP_003410816.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcv:Bcav_3179 major facilitator superfamily MFS_1 YP_003410817.1 PFAM: peptidase S14 ClpP; KEGG: rop:ROP_10880 ATP-dependent Clp protease proteolytic subunit YP_003410818.1 PFAM: alpha/beta hydrolase fold; KEGG: mkm:Mkms_3801 alpha/beta hydrolase fold YP_003410819.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: mpl:Mpal_1101 riboflavin biosynthesis protein RibD YP_003410820.1 PFAM: regulatory protein TetR; KEGG: sen:SACE_3451 TetR family transcriptional regulator YP_003410821.1 PFAM: major facilitator superfamily MFS_1; KEGG: csa:Csal_0040 major facilitator transporter YP_003410823.1 KEGG: sma:SAV_5819 oxidoreductase; TIGRFAM: 2-dehydropantoate 2-reductase; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_003410824.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fre:Franean1_4155 GCN5-related N- acetyltransferase YP_003410825.1 KEGG: kra:Krad_1202 hypothetical protein YP_003410826.1 PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1894 major facilitator transporter YP_003410827.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nfa:nfa35900 putative acetyltransferase YP_003410828.1 TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase; KEGG: nca:Noca_3746 heavy metal translocating P- type ATPase YP_003410829.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cps:CPS_1640 acetyltransferase YP_003410831.1 PFAM: Heavy metal transport/detoxification protein; KEGG: mjl:Mjls_4497 heavy metal transport/detoxification protein YP_003410832.1 PFAM: major facilitator superfamily MFS_1; KEGG: fre:Franean1_0731 EmrB/QacA family drug resistance transporter YP_003410833.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: mva:Mvan_5002 regulatory protein, LuxR YP_003410834.1 KEGG: bcv:Bcav_0587 hypothetical protein YP_003410835.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: bbe:BBR47_21140 potassium uptake protein YP_003410836.1 KEGG: rci:RRC32 hypothetical protein YP_003410837.1 KEGG: bcv:Bcav_1664 oxidoreductase molybdopterin binding YP_003410838.1 KEGG: nca:Noca_3811 vitamin B12-dependent ribonucleotide reductase; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; PFAM: Ribonucleotide reductase class II vitamin B12- dependent; ribonucleotide reductase large subunit YP_003410839.1 PFAM: ATP-cone domain protein; KEGG: mgi:Mflv_3954 transcriptional regulator NrdR YP_003410840.1 KEGG: Hypothetical protein CBG04651 YP_003410841.1 PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; KEGG: nca:Noca_3815 peptidoglycan-binding LysM YP_003410842.1 KEGG: stp:Strop_1451 LexA repressor; TIGRFAM: LexA repressor; PFAM: LexA DNA-binding domain protein; Peptidase S24/S26A/S26B, conserved region YP_003410843.1 KEGG: sen:SACE_1755 hypothetical protein YP_003410844.1 PFAM: phosphoesterase PA-phosphatase related; KEGG: sma:SAV_6539 integral membrane protein YP_003410845.1 TIGRFAM: GTP-binding proten HflX; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: fre:Franean1_1231 small GTP-binding protein YP_003410847.1 KEGG: sen:SACE_1753 diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_003410848.1 KEGG: saq:Sare_1403 tRNA delta(2)- isopentenylpyrophosphate transferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_003410849.1 KEGG: sco:SCO5788 hypothetical protein YP_003410850.1 PFAM: protein of unknown function DUF349; KEGG: rer:RER_27610 hypothetical protein YP_003410851.1 KEGG: saq:Sare_1400 RNA modification protein; TIGRFAM: RNA modification enzyme, MiaB family; tRNA- i(6)A37 thiotransferase enzyme MiaB; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003410852.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV_2484 glutamate uptake system ATP- binding protein YP_003410853.1 PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3; KEGG: fre:Franean1_1224 extracellular solute- binding protein YP_003410854.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fre:Franean1_1223 polar amino acid ABC transporter, inner membrane subunit YP_003410855.1 TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: fal:FRAAL5716 glutamate permease YP_003410857.1 KEGG: mgi:Mflv_4277 cytochrome-c oxidase; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I YP_003410858.1 PFAM: regulatory protein RecX; KEGG: sma:SAV_2491 recombination regulator RecX YP_003410859.1 KEGG: kra:Krad_1492 RecA protein; TIGRFAM: recA protein; PFAM: RecA domain protein; SMART: AAA ATPase YP_003410860.1 KEGG: fre:Franean1_1218 hypothetical protein YP_003410862.1 PFAM: major facilitator superfamily MFS_1; KEGG: saq:Sare_1387 major facilitator transporter YP_003410863.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: rer:RER_27750 acyl-CoA dehydrogenase YP_003410864.1 PFAM: DEAD/H associated domain protein; DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; AAA ATPase; KEGG: fra:Francci3_3527 DEAD/DEAH box helicase-like YP_003410865.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: dra:DR_2141 hypothetical protein YP_003410866.1 PFAM: DNA glycosylase/AP lyase, H2TH DNA-binding; Formamidopyrimidine-DNA glycosylase catalytic domain protein; KEGG: fal:FRAAL5723 endonuclease VIII YP_003410867.1 PFAM: PspA/IM30 family protein; KEGG: mab:MAB_3067c hypothetical protein YP_003410868.1 PFAM: PfkB domain protein; KEGG: saq:Sare_3490 ribokinase-like domain- containing protein YP_003410869.1 PFAM: GCN5-related N-acetyltransferase; KEGG: scl:sce8188 putative acetyltransferase YP_003410870.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: krh:KRH_03730 putative sugar ABC transporter ATP-binding protein YP_003410871.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_1115 binding-protein-dependent transport systems inner membrane component YP_003410872.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: kra:Krad_1114 binding-protein-dependent transport systems inner membrane component YP_003410873.1 PFAM: extracellular solute-binding protein family 1; KEGG: bcv:Bcav_1095 extracellular solute-binding protein family 1 YP_003410874.1 KEGG: ace:Acel_0084 hypothetical protein YP_003410875.1 PFAM: regulatory protein TetR; KEGG: mjl:Mjls_1488 TetR family transcriptional regulator YP_003410876.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: nfa:nfa38560 hypothetical protein YP_003410877.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: sen:SACE_5881 CDP-diacylglycerol--glycerol-3- phosphate 3-phosphatidyltransferase YP_003410878.1 KEGG: sen:SACE_5882 hypothetical protein; TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: Protein of unknown function UPF0004 ; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003410879.1 PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; KEGG: nfa:nfa38640 putative cell division protein YP_003410880.1 TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: kra:Krad_0406 ECF subfamily RNA polymerase sigma-24 factor YP_003410881.1 KEGG: kra:Krad_0405 hypothetical protein YP_003410882.1 PFAM: beta-lactamase domain protein; RNA- metabolising metallo-beta-lactamase; KEGG: saq:Sare_1348 beta-lactamase domain- containing protein YP_003410883.1 KEGG: sma:SAV_2516 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_003410884.1 PFAM: dihydrofolate reductase region; KEGG: kra:Krad_4438 dihydrofolate reductase YP_003410885.1 KEGG: nfa:nfa50220 thymidylate synthase; TIGRFAM: thymidylate synthase; PFAM: thymidylate synthase YP_003410886.1 PFAM: protein of unknown function DUF1232; KEGG: msm:MSMEG_5602 hypothetical protein YP_003410887.1 PFAM: protein of unknown function DUF1006; KEGG: saq:Sare_1344 hypothetical protein YP_003410888.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_1384 GCN5-related N- acetyltransferase YP_003410889.1 KEGG: stp:Strop_1383 dihydrodipicolinate reductase; TIGRFAM: dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_003410890.1 PFAM: VanZ family protein; KEGG: sen:SACE_5721 hypothetical protein YP_003410891.1 PFAM: peptidase M16 domain protein; KEGG: sen:SACE_5913 putative zinc protease YP_003410892.1 KEGG: sen:SACE_5914 polynucleotide phosphorylase/polyadenylase; TIGRFAM: polyribonucleotide nucleotidyltransferase; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase; PFAM: 3' exoribonuclease; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; RNA binding S1 domain protein; Exoribonuclease, phosphorolytic domain 2; K Homology, type 1, subgroup; SMART: KH domain protein YP_003410893.1 TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15; KEGG: fra:Francci3_3556 30S ribosomal protein S15 YP_003410894.1 TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: FAD synthetase; Riboflavin kinase; KEGG: stp:Strop_1379 riboflavin biosynthesis protein RibF YP_003410895.1 TIGRFAM: branched-chain amino acid aminotransferase; PFAM: aminotransferase class IV; KEGG: tfu:Tfu_0616 branched-chain amino acid aminotransferase YP_003410896.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sma:SAV_885 hypothetical protein YP_003410897.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: art:Arth_3439 HAD family hydrolase YP_003410898.1 TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein; tRNA pseudouridine synthase II; KEGG: saq:Sare_1336 tRNA pseudouridine synthase B YP_003410899.1 TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE; KEGG: sen:SACE_5921 DNA-damage-inducible protein F YP_003410900.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: stp:Strop_1373 phosphoesterase domain- containing protein YP_003410902.1 TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A; KEGG: sen:SACE_5924 ribosome-binding factor A YP_003410903.1 PFAM: protein of unknown function DUF503; KEGG: sma:SAV_2550 hypothetical protein YP_003410904.1 TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; translation initiation factor IF-2 domain protein; KEGG: rha:RHA1_ro06644 translation initiation factor IF-2 YP_003410905.1 PFAM: NusA domain protein; protein of unknown function DUF448; KEGG: sen:SACE_5927 transcription elongation factor NusA YP_003410906.1 PFAM: protein of unknown function DUF150; KEGG: stp:Strop_1367 hypothetical protein YP_003410907.1 KEGG: nfa:nfa40700 hypothetical protein YP_003410908.1 KEGG: mgi:Mflv_4044 hypothetical protein YP_003410909.1 PFAM: penicillin-binding protein transpeptidase; NTF2 domain protein transpeptidase; KEGG: kra:Krad_0475 penicillin-binding protein transpeptidase YP_003410910.1 PFAM: GCN5-related N-acetyltransferase; KEGG: ace:Acel_1521 GCN5-related N- acetyltransferase YP_003410911.1 KEGG: tfu:Tfu_0749 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4- diphosphate synthase; PFAM: IspG family protein YP_003410912.1 PFAM: peptidase M50; KEGG: tfu:Tfu_0748 PDZ/DHR/GLGF YP_003410913.1 KEGG: stp:Strop_1350 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain protein YP_003410914.1 KEGG: rop:ROP_66210 hypothetical membrane protein YP_003410915.1 TIGRFAM: LPXTG-motif cell wall anchor domain protein; KEGG: bcv:Bcav_3684 LPXTG-motif cell wall anchor domain protein YP_003410916.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: sco:SCO6020 transcriptional regulator YP_003410917.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: stp:Strop_1363 hypothetical protein YP_003410918.1 TIGRFAM: radical SAM enzyme, Cfr family; PFAM: Radical SAM domain protein; KEGG: sen:SACE_6026 Fe-S-cluster redox protein YP_003410919.1 KEGG: hypothetical protein YP_003410920.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: mlu:Mlut_02030 rRNA methylase YP_003410921.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; KEGG: bcv:Bcav_3266 RNA polymerase, sigma-24 subunit, ECF subfamily YP_003410922.1 PFAM: bifunctional deaminase-reductase domain protein; KEGG: stp:Strop_1085 deaminase-reductase domain- containing protein YP_003410923.1 PFAM: protein of unknown function DUF344; KEGG: cyp:PCC8801_4140 protein of unknown function DUF344 YP_003410924.1 PFAM: protein of unknown function DUF952; GCN5- related N-acetyltransferase; KEGG: msm:MSMEG_2757 glutathione S-transferase domain-containing protein YP_003410925.1 PFAM: phosphatidate cytidylyltransferase; KEGG: sen:SACE_6034 phosphatidate cytidylyltransferase YP_003410926.1 TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor; KEGG: mva:Mvan_2221 ribosome recycling factor YP_003410927.1 KEGG: ace:Acel_1540 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_003410928.1 TIGRFAM: translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein; KEGG: rop:ROP_66130 elongation factor Ts YP_003410929.1 TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2; KEGG: fre:Franean1_1161 ribosomal protein S2 YP_003410930.1 PFAM: Peptidase M23; KEGG: stp:Strop_1314 peptidase M23B YP_003410931.1 TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma- 70 region 3 domain protein; KEGG: kra:Krad_1411 RNA polymerase sigma factor WhiG YP_003410932.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: nca:Noca_3245 phage integrase family protein YP_003410933.1 TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: stp:Strop_1318 DNA protecting protein DprA YP_003410934.1 KEGG: fal:FRAAL5784 magnesium-chelatase (Mg- protoporphyrin IX chelatase) (Mg-chelatase subunit D; TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_003410935.1 PFAM: protein of unknown function UPF0102; KEGG: bcv:Bcav_2532 protein of unknown function UPF0102 YP_003410936.1 PFAM: Protein of unknown function DUF2469; KEGG: sen:SACE_6046 hypothetical protein YP_003410937.1 PFAM: ribonuclease HII/HIII; KEGG: saq:Sare_1201 ribonuclease HII YP_003410938.1 PFAM: regulatory protein LuxR; response regulator receiver; SMART: regulatory protein LuxR; KEGG: rrs:RoseRS_3421 two component LuxR family transcriptional regulator YP_003410939.1 KEGG: rha:RHA1_ro06543 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_003410940.1 TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19; KEGG: fal:FRAAL5789 50S ribosomal protein L19 YP_003410941.1 PFAM: NUDIX hydrolase; KEGG: nfa:nfa37070 hypothetical protein YP_003410942.1 KEGG: nfa:nfa41540 tRNA (guanine-N(1)-)- methyltransferase; TIGRFAM: tRNA (guanine-N1)-methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_003410943.1 TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein; KEGG: tfu:Tfu_0664 16S rRNA-processing protein RimM YP_003410944.1 KEGG: fre:Franean1_1149 hypothetical protein YP_003410945.1 TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16; KEGG: fre:Franean1_1148 30S ribosomal protein S16 YP_003410946.1 KEGG: kra:Krad_1436 prolyl-tRNA synthetase; TIGRFAM: prolyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); YbaK/prolyl-tRNA synthetase associated region; Anticodon- binding domain protein YP_003410947.1 PFAM: amidohydrolase; Amidohydrolase 3; KEGG: rer:RER_24430 hydrolase YP_003410948.1 KEGG: saq:Sare_1190 signal recognition particle protein; TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; Signal peptide binding (SRP54) M- domain protein; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003410950.1 KEGG: fre:Franean1_6202 PII uridylyl-transferase; TIGRFAM: protein-P-II uridylyltransferase; PFAM: GlnD PII-uridylyltransferase; metal-dependent phosphohydrolase HD sub domain; amino acid-binding ACT domain protein; SMART: metal-dependent phosphohydrolase HD region YP_003410951.1 PFAM: nitrogen regulatory protein P-II; KEGG: mjl:Mjls_1937 nitrogen regulatory protein P- II YP_003410952.1 TIGRFAM: ammonium transporter; PFAM: ammonium transporter; KEGG: kra:Krad_1393 ammonium transporter YP_003410953.1 TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein; KEGG: sgr:SGR_4322 putative integral membrane transport protein YP_003410954.1 KEGG: sma:SAV_3608 ABC transporter ATP-binding protein; TIGRFAM: cobalt ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003410955.1 PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; GAF domain protein; KEGG: kra:Krad_0433 putative PAS/PAC sensor protein YP_003410956.1 KEGG: sgr:SGR_1898 putative signal recognition particle-docking protein FtsY; TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; SMART: AAA ATPase YP_003410957.1 KEGG: rop:ROP_59510 hypothetical protein YP_003410958.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: sgr:SGR_3562 hypothetical protein YP_003410959.1 PFAM: GCN5-related N-acetyltransferase; KEGG: fra:Francci3_0666 GCN5-related N- acetyltransferase YP_003410960.1 PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kra:Krad_1438 endonuclease/exonuclease/phosphatase YP_003410961.1 KEGG: saq:Sare_1181 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain protein; SMART: AAA ATPase YP_003410962.1 KEGG: saq:Sare_1180 hypothetical protein YP_003410963.1 PFAM: acylphosphatase; KEGG: mva:Mvan_2174 acylphosphatase YP_003410964.1 KEGG: saq:Sare_1178 formamidopyrimidine-DNA glycosylase; TIGRFAM: formamidopyrimidine-DNA glycosylase; PFAM: Formamidopyrimidine-DNA glycosylase catalytic domain protein; zinc finger Fpg domain protein; DNA glycosylase/AP lyase, H2TH DNA-binding YP_003410965.1 KEGG: sen:SACE_6100 ribonuclease III; TIGRFAM: ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein; SMART: ribonuclease III; double-stranded RNA binding domain protein YP_003410966.1 TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein; KEGG: sen:SACE_6101 50S ribosomal protein L32 YP_003410967.1 PFAM: protein of unknown function DUF177; KEGG: saq:Sare_1174 hypothetical protein YP_003410968.1 KEGG: sen:SACE_6104 large Ala/Glu-rich protein YP_003410969.1 KEGG: ace:Acel_1578 phosphopantetheine adenylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; PFAM: cytidylyltransferase YP_003410970.1 TIGRFAM: methyltransferase; PFAM: Protein of unknown function methylase putative; KEGG: rer:RER_24260 hypothetical protein YP_003410971.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; SMART: DEAD-like helicase ; helicase domain protein; KEGG: sen:SACE_6119 ATP-dependent DNA helicase RecG YP_003410972.1 TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase; KEGG: stp:Strop_1278 Dak phosphatase YP_003410973.1 TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28; KEGG: nfa:nfa41960 50S ribosomal protein L28 YP_003410974.1 KEGG: tfu:Tfu_2391 hypothetical protein YP_003410975.1 PFAM: GCN5-related N-acetyltransferase; KEGG: nca:Noca_0731 GCN5-related N- acetyltransferase YP_003410976.1 KEGG: saq:Sare_1165 thiamine monophosphate kinase; TIGRFAM: thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein domain protein YP_003410977.1 PFAM: Transcription regulator, AsnC-type-like; KEGG: fal:FRAAL5817 hypothetical protein YP_003410978.1 KEGG: sen:SACE_6129 hypothetical protein YP_003410979.1 KEGG: ttj:TTHA1658 hypothetical protein YP_003410980.1 KEGG: sen:SACE_6130 D-alanyl-alanine synthetase A; TIGRFAM: D-alanine/D-alanine ligase; PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp YP_003410981.1 KEGG: rxy:Rxyl_0272 CDP-diacylglycerol-choline O- phosphatidyltransferase YP_003410982.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; KEGG: sen:SACE_6136 cystathionine gamma-lyase YP_003410983.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; NADP oxidoreductase coenzyme F420-dependent; Ketopantoate reductase ApbA/PanE domain protein; KEGG: sma:SAV_2680 NAD(P)H-dependent glycerol-3- phosphate dehydrogenase YP_003410984.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: stp:Strop_1265 phospholipid/glycerol acyltransferase YP_003410985.1 TIGRFAM: 2-phospho-L-lactate guanylyltransferase CofC; KEGG: saq:Sare_1155 hypothetical protein YP_003410986.1 PFAM: Polyphosphate kinase; KEGG: rer:RER_24120 polyphosphate kinase YP_003410987.1 PFAM: NUDIX hydrolase; Phosphoglycerate mutase; KEGG: sen:SACE_6141 NUDIX hydrolase YP_003410988.1 TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain protein; KEGG: ace:Acel_1590 isopropylmalate isomerase small subunit YP_003410989.1 TIGRFAM: 3-isopropylmalate dehydratase, large subunit; PFAM: aconitate hydratase domain protein; KEGG: ace:Acel_1591 isopropylmalate isomerase large subunit YP_003410990.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: nfa:nfa42130 putative transcriptional regulator YP_003410991.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sen:SACE_1163 nitrate reductase (NADH) YP_003410992.1 TIGRFAM: galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase; GHMP kinase domain protein; KEGG: nfa:nfa45050 putative galactokinase YP_003410993.1 KEGG: nfa:nfa11640 putative galactose-1-phosphate uridylyltransferase; TIGRFAM: galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_003410994.1 PFAM: Abortive infection protein; KEGG: nca:Noca_3335 abortive infection protein YP_003410995.1 TIGRFAM: glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; KEGG: sen:SACE_6148 glutamyl-tRNA synthetase YP_003410996.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: stp:Strop_1256 5-oxopent-3-ene-1,2,5- tricarboxylate decarboxylase YP_003410997.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: sma:SAV_769 hypothetical protein YP_003410998.1 PFAM: Antibiotic biosynthesis monooxygenase; KEGG: sgr:SGR_1287 hypothetical protein YP_003410999.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: ote:Oter_1683 integral membrane sensor signal transduction histidine kinase YP_003411000.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ote:Oter_1682 two component LuxR family transcriptional regulator YP_003411002.1 KEGG: stp:Strop_1243 putative alpha- isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain; pyruvate carboxyltransferase YP_003411003.1 PFAM: isocitrate/isopropylmalate dehydrogenase; KEGG: sen:SACE_6154 beta-isopropylmalate dehydrogenase YP_003411004.1 KEGG: fal:FRAAL5848 D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein YP_003411005.1 KEGG: rsa:RSal33209_0057 hypothetical protein YP_003411006.1 KEGG: cmi:CMM_0951 hypothetical protein YP_003411007.1 KEGG: rsa:RSal33209_1045 ketol-acid reductoisomerase; TIGRFAM: ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain protein; acetohydroxy acid isomeroreductase YP_003411008.1 KEGG: sen:SACE_6158 acetolactate synthase 3 regulatory subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_003411009.1 TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate protein TPP binding domain protein; thiamine pyrophosphate protein central region; thiamine pyrophosphate protein domain protein TPP- binding; KEGG: fre:Franean1_1090 acetolactate synthase 1 catalytic subunit YP_003411010.1 KEGG: aav:Aave_0022 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003411011.1 KEGG: gau:GAU_0382 putative signaling protein; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: EAL domain protein; GGDEF domain containing protein; PAS domain containing protein YP_003411012.1 KEGG: ace:Acel_0705 dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_003411013.1 SMART: helix-turn-helix domain protein; KEGG: msm:MSMEG_1289 hypothetical protein YP_003411014.1 KEGG: sen:SACE_6160 hypothetical protein YP_003411015.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; Shikimate/quinate 5-dehydrogenase; KEGG: ace:Acel_0699 D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding YP_003411016.1 KEGG: tfu:Tfu_0624 putative oxidoreductase YP_003411017.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase; GatB central domain protein; KEGG: ace:Acel_0698 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_003411019.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase; KEGG: sen:SACE_6173 glutamyl-tRNA(Gln) amidotransferase, subunit A YP_003411020.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit; KEGG: sen:SACE_6174 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_003411021.1 PFAM: amino acid-binding ACT domain protein; KEGG: sen:SACE_6175 amino acid-binding ACT YP_003411022.1 KEGG: saq:Sare_1109 DNA ligase, NAD-dependent; TIGRFAM: DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; zinc- finger NAD-dependent DNA ligase C4-type; BRCT domain protein; helix-hairpin-helix motif; NAD-dependent DNA ligase OB-fold; SMART: NAD-dependent DNA ligase ; BRCT domain protein YP_003411023.1 PFAM: Methionine synthase vitamin-B12 independent; KEGG: sco:SCO5493 hypothetical protein YP_003411024.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)- methyltransferase; PFAM: tRNA methyl transferase-like; KEGG: saq:Sare_1107 tRNA-specific 2-thiouridylase MnmA YP_003411025.1 PFAM: aminotransferase class V; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class-III; KEGG: mkm:Mkms_1921 aminotransferase, class V YP_003411026.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_6189 multidrug resistance efflux protein YP_003411027.1 PFAM: Electron transfer flavoprotein alpha subunit ; Electron transfer flavoprotein alpha/beta-subunit; KEGG: stp:Strop_1211 electron transfer flavoprotein, alpha subunit YP_003411028.1 PFAM: Electron transfer flavoprotein alpha/beta- subunit; KEGG: saq:Sare_1103 electron transfer flavoprotein alpha/beta-subunit YP_003411029.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: fre:Franean1_1071 enoyl-CoA hydratase/isomerase YP_003411030.1 KEGG: fre:Franean1_4896 hypothetical protein YP_003411031.1 KEGG: acp:A2cp1_3189 GtrA family protein YP_003411032.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: nca:Noca_2576 ABC transporter related YP_003411033.1 KEGG: ace:Acel_0681 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003411034.1 PFAM: Forkhead-associated protein; KEGG: fre:Franean1_0737 FHA domain-containing protein YP_003411035.1 KEGG: fra:Francci3_3664 alpha-glucan phosphorylase; TIGRFAM: alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_003411036.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: fal:FRAAL5899 putative glucanohydrolase (alpha-amylase) YP_003411037.1 KEGG: ace:Acel_0678 trehalose synthase; TIGRFAM: trehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003411038.1 KEGG: fra:Francci3_3680 putative pep2 protein YP_003411039.1 KEGG: fal:FRAAL5902 glycogen branching enzyme; TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_003411040.1 PFAM: protein of unknown function zinc metallopeptidase putative; KEGG: sen:SACE_6217 lipoprotein peptidase LpqM YP_003411041.1 PFAM: Thioredoxin domain; KEGG: sen:SACE_6218 thioredoxin YP_003411042.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sgr:SGR_2122 MarR family transcriptional regulator YP_003411043.1 KEGG: rop:ROP_56500 hypothetical protein YP_003411044.1 PFAM: FAD dependent oxidoreductase; KEGG: nfa:nfa46290 putative dehydrogenase YP_003411045.1 KEGG: sma:SAV_2855 lysine arginine ornithine transport system kinase; TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; SMART: AAA ATPase YP_003411046.1 KEGG: rha:RHA1_ro01455 acetyl-CoA acetyltransferase; TIGRFAM: acetyl-CoA acetyltransferase; PFAM: Thiolase YP_003411047.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: bca:BCE_3158 bromoperoxidase YP_003411048.1 TIGRFAM: methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: nca:Noca_1796 methylmalonyl-CoA epimerase YP_003411049.1 TIGRFAM: crotonyl-CoA reductase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: fre:Franean1_4051 crotonyl-CoA reductase YP_003411050.1 KEGG: sen:SACE_6241 M protein YP_003411051.1 KEGG: chl:Chy400_1526 LPXTG-motif cell wall anchor domain protein YP_003411052.1 PFAM: peptidase C60 sortase A and B; KEGG: cmi:CMM_0129 putative sortase YP_003411053.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 6-phosphogluconate dehydrogenase NAD-binding; 3- hydroxyacyl-CoA dehydrogenase domain protein; KEGG: nca:Noca_1784 3-hydroxyacyl-CoA dehydrogenase YP_003411054.1 PFAM: protein of unknown function DUF91; KEGG: tfu:Tfu_2401 hypothetical protein YP_003411055.1 KEGG: fre:Franean1_7164 hypothetical protein YP_003411056.1 PFAM: sodium:dicarboxylate symporter; KEGG: mes:Meso_3163 sodium:dicarboxylate symporter YP_003411057.1 PFAM: PilT protein domain protein; KEGG: spe:Spro_1038 PilT domain-containing protein YP_003411058.1 TIGRFAM: prevent-host-death family protein; PFAM: protein of unknown function DUF172; KEGG: saq:Sare_2599 prevent-host-death family protein YP_003411059.1 PFAM: Enoyl-CoA hydratase/isomerase; KEGG: rfr:Rfer_0608 enoyl-CoA hydratase/isomerase YP_003411060.1 PFAM: Protein of unknown function DUF2071; KEGG: sgr:SGR_3185 hypothetical protein YP_003411061.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: kra:Krad_3270 oxidoreductase domain- containing protein YP_003411062.1 KEGG: fre:Franean1_1034 methylmalonyl-CoA mutase, large subunit; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12- binding domain protein YP_003411063.1 KEGG: kra:Krad_1273 hypothetical protein YP_003411064.1 KEGG: sen:SACE_1989 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003411065.1 TIGRFAM: UDP-N-acetylglucosamine 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase); KEGG: saq:Sare_4007 UDP-N-acetylglucosamine 1- carboxyvinyltransferase YP_003411066.1 TIGRFAM: ATP/cobalamin adenosyltransferase; PFAM: cobalamin adenosyltransferase; KEGG: fra:Francci3_3704 ATP:cob(I)alamin adenosyltransferase YP_003411067.1 PFAM: Protein of unknown function DUF2550; KEGG: sco:SCO5375 secreted protein YP_003411068.1 TIGRFAM: ATP synthase F1, epsilon subunit; PFAM: ATPase, F1 complex, delta/epsilon subunit- like; KEGG: sen:SACE_6279 F0F1 ATP synthase subunit epsilon YP_003411069.1 KEGG: rrs:RoseRS_0618 hypothetical protein YP_003411070.1 KEGG: ace:Acel_0653 F0F1 ATP synthase subunit beta; TIGRFAM: ATP synthase F1, beta subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase YP_003411071.1 TIGRFAM: ATP synthase F1, gamma subunit; PFAM: H+transporting two-sector ATPase gamma subunit; KEGG: mjl:Mjls_3863 F0F1 ATP synthase subunit gamma YP_003411072.1 KEGG: ace:Acel_0651 F0F1 ATP synthase subunit alpha; TIGRFAM: ATP synthase F1, alpha subunit; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; HerA-ATP synthase, barrel domain; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_003411073.1 TIGRFAM: ATP synthase F1, delta subunit; PFAM: H+transporting two-sector ATPase delta (OSCP) subunit; KEGG: sgr:SGR_2166 F0F1 ATP synthase subunit delta YP_003411074.1 TIGRFAM: ATP synthase F0, B subunit; PFAM: H+transporting two-sector ATPase B/B' subunit; KEGG: sen:SACE_6284 ATP synthase B chain YP_003411075.1 TIGRFAM: ATP synthase F0, C subunit; PFAM: H+transporting two-sector ATPase C subunit; KEGG: stp:Strop_3635 ATP synthase F0, C subunit YP_003411076.1 TIGRFAM: ATP synthase F0, A subunit; PFAM: H+transporting two-sector ATPase A subunit; KEGG: saq:Sare_4018 ATP synthase F0, A subunit YP_003411077.1 KEGG: saq:Sare_4019 hypothetical protein YP_003411078.1 KEGG: saq:Sare_4020 hypothetical protein YP_003411079.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: fal:FRAAL5941 undecaprenyl-phosphate alpha-N- acetylglucosaminyl 1-phosphate transferase YP_003411080.1 TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; KEGG: ace:Acel_0643 translation factor SUA5 YP_003411081.1 TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small; KEGG: sen:SACE_6291 putative methyltransferase YP_003411082.1 TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein; KEGG: ace:Acel_0641 peptide chain release factor 1 YP_003411083.1 TIGRFAM: ribosomal protein L31; PFAM: ribosomal protein L31; KEGG: tfu:Tfu_2420 50S ribosomal protein L31 YP_003411084.1 KEGG: fal:FRAAL5948 transcription termination factor Rho; TIGRFAM: transcription termination factor Rho; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; Rho termination factor domain protein; Rho termination factor RNA-binding; SMART: Cold shock protein; AAA ATPase YP_003411085.1 KEGG: sma:SAV_2916 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_003411086.1 TIGRFAM: threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: sco:SCO5355 threonine synthase YP_003411087.1 PFAM: homoserine dehydrogenase; amino acid-binding ACT domain protein; homoserine dehydrogenase NAD-binding; KEGG: fal:FRAAL5951 homoserine dehydrogenase YP_003411088.1 TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; KEGG: tfu:Tfu_2425 diaminopimelate decarboxylase YP_003411089.1 KEGG: stp:Strop_3653 arginyl-tRNA synthetase; TIGRFAM: arginyl-tRNA synthetase YP_003411090.1 KEGG: rer:RER_39250 hypothetical protein YP_003411091.1 PFAM: protein of unknown function DUF305; KEGG: rha:RHA1_ro01492 hypothetical protein YP_003411092.1 PFAM: NmrA family protein; KEGG: krh:KRH_16940 putative NAD(P)H--quinone oxidoreductase YP_003411093.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: fre:Franean1_6443 short-chain dehydrogenase/reductase SDR YP_003411094.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro10229 long-chain-fatty-acid--CoA ligase YP_003411095.1 PFAM: alpha/beta hydrolase fold; KEGG: bja:blr2885 poly-beta-hydroxybutyrate polymerase YP_003411096.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bja:blr2886 hypothetical protein YP_003411097.1 KEGG: sma:SAV_7311 1-acylglycerol-3-phosphate O- acyltransferase YP_003411098.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sen:SACE_7004 ABC transporter, ATP-binding component YP_003411099.1 KEGG: rha:RHA1_ro05084 adenylate cyclase; PFAM: adenylyl cyclase class-3/4/guanylyl cyclase; SMART: adenylyl cyclase class-3/4/guanylyl cyclase YP_003411100.1 PFAM: UspA domain protein; KEGG: rha:RHA1_ro00974 hypothetical protein YP_003411101.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: stp:Strop_3688 ABC transporter related YP_003411102.1 KEGG: stp:Strop_3689 hypothetical protein YP_003411103.1 PFAM: Ankyrin; SMART: Ankyrin; KEGG: aas:Aasi_0703 hypothetical protein YP_003411104.1 TIGRFAM: 2-oxoglutarate dehydrogenase, E1 subunit; PFAM: Transketolase central region; dehydrogenase E1 component; catalytic domain of components of various dehydrogenase complexes; KEGG: stp:Strop_3690 alpha-ketoglutarate decarboxylase YP_003411105.1 KEGG: sgr:SGR_2227 hypothetical protein YP_003411106.1 PFAM: membrane-bound metal-dependent hydrolase; KEGG: kra:Krad_0035 putative integral membrane protein YP_003411107.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: sgr:SGR_2236 putative malate dehydrogenase YP_003411108.1 PFAM: dTDP-4-dehydrorhamnose 35-epimerase related; KEGG: fra:Francci3_3752 dTDP-4-dehydrorhamnose 3,5- epimerase YP_003411109.1 PFAM: Peptidase S24/S26A/S26B, conserved region; KEGG: saq:Sare_4076 putative phage repressor YP_003411110.1 KEGG: sen:SACE_6419 superoxide dismutase; TIGRFAM: superoxide dismutase, Ni; PFAM: Superoxide dismutase Ni-type YP_003411111.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; 3-demethylubiquinone-9 3- methyltransferase; KEGG: bcv:Bcav_1646 glyoxalase/bleomycin resistance protein/dioxygenase YP_003411112.1 KEGG: rce:RC1_1432 phosphatidylserine decarboxylase- like protein, putative; TIGRFAM: phosphatidylserine decarboxylase related protein; PFAM: phosphatidylserine decarboxylase-related YP_003411113.1 TIGRFAM: CDP-diacylglycerol/serine O- phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; KEGG: hha:Hhal_0691 CDP-diacylglycerol--serine O- phosphatidyltransferase YP_003411114.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_6423 acetyltransferase YP_003411115.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: kra:Krad_4163 HAD family hydrolase YP_003411116.1 KEGG: cmi:CMM_1061 hypothetical protein YP_003411117.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: sma:SAV_3015 hypothetical protein YP_003411118.1 PFAM: transcription factor WhiB; KEGG: sco:SCO5240 hypothetical protein YP_003411119.1 PFAM: histidine kinase dimerisation/phosphoacceptor; PAS fold-4 domain protein; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: sen:SACE_6427 putative two-component system sensor kinase YP_003411120.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_6176 acetyltransferase YP_003411121.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: ace:Acel_0549 biotin/lipoyl attachment domain- containing protein YP_003411122.1 PFAM: Carbamoyl-phosphate synthetase large chain domain protein; KEGG: rop:ROP_31190 acyl-CoA carboxylase alpha chain YP_003411123.1 TIGRFAM: anti-sigma factor; KEGG: sen:SACE_6429 anti-sigma factor YP_003411124.1 TIGRFAM: RNA polymerase sigma-70 factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; Sigma-70 region 4 type 2; sigma-70 region 4 domain protein; KEGG: fal:FRAAL6010 RNA polymerase sigma factor RpoE YP_003411125.1 TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region; KEGG: sco:SCO2058 transcriptional regulatory protein YP_003411126.1 KEGG: saq:Sare_0442 hypothetical protein YP_003411127.1 PFAM: protein of unknown function DUF159; KEGG: sen:SACE_6434 putative bacteriophage protein YP_003411128.1 PFAM: Aldehyde Dehydrogenase; KEGG: dra:DR_A0343 succinic-semialdehyde dehydrogenase, putative YP_003411129.1 KEGG: sgr:SGR_2310 3-phosphoshikimate 1- carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1- carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1- carboxyvinyltransferase) YP_003411130.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: sen:SACE_6436 GTPase EngC YP_003411131.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: aau:AAur_1135 putative glyoxalase family protein YP_003411132.1 PFAM: Protein of unknown function DUF2087; KEGG: nca:Noca_3346 hypothetical protein YP_003411133.1 TIGRFAM: histidinol-phosphate phosphatase; PFAM: inositol monophosphatase; KEGG: kra:Krad_1206 histidinol-phosphate phosphatase, putative YP_003411134.1 KEGG: kra:Krad_0556 hypothetical protein YP_003411135.1 PFAM: Carbohydrate kinase, FGGY-like; KEGG: tfu:Tfu_1575 putative sugar kinase protein YP_003411136.1 KEGG: sen:SACE_5151 hypothetical protein YP_003411137.1 PFAM: alpha/beta hydrolase fold; KEGG: kra:Krad_4138 alpha/beta hydrolase fold YP_003411138.1 PFAM: aldo/keto reductase; KEGG: gvi:gll0838 oxidoreductase YP_003411139.1 PFAM: cytochrome P450; KEGG: sen:SACE_5814 cytochrome P450-like enzyme YP_003411140.1 PFAM: aldo/keto reductase; KEGG: bcv:Bcav_2857 aldo/keto reductase YP_003411141.1 PFAM: alpha/beta hydrolase fold; KEGG: saq:Sare_3606 alpha/beta hydrolase fold YP_003411142.1 KEGG: rha:RHA1_ro05843 cystathionine beta-synthase; TIGRFAM: cystathionine beta-synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; CBS domain containing protein; SMART: CBS domain containing protein YP_003411143.1 PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sgr:SGR_2579 cystathionine gamma-synthase YP_003411144.1 TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24; KEGG: sco:SCO6409 methionine aminopeptidase YP_003411145.1 KEGG: sco:SCO6191 hypothetical protein YP_003411146.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: rop:ROP_37700 hypothetical protein YP_003411147.1 KEGG: fre:Franean1_1973 acetyltransferase-like protein YP_003411148.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sen:SACE_2224 glycine betaine transport system permease protein YP_003411149.1 KEGG: saq:Sare_3486 glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; SMART: AAA ATPase YP_003411150.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: oih:OB1001 glycine betaine ABC transporter substrate-binding protein YP_003411151.1 PFAM: Taurine catabolism dioxygenase TauD/TfdA; KEGG: rop:ROP_22040 putative dioxygenase YP_003411152.1 PFAM: regulatory protein TetR; KEGG: fal:FRAAL1219 TetR family transcriptional regulator YP_003411153.1 KEGG: tfu:Tfu_3024 transmembrane protein YP_003411154.1 KEGG: sma:SAV_489 hypothetical protein YP_003411155.1 PFAM: protein of unknown function UPF0182; KEGG: sen:SACE_1102 hypothetical protein YP_003411156.1 KEGG: saq:Sare_4111 hypothetical protein YP_003411157.1 TIGRFAM: conserved hypothetical protein; PFAM: Protein of unknown function DUF2342; KEGG: sen:SACE_1099 hypothetical protein YP_003411158.1 PFAM: protein of unknown function DUF45; KEGG: kra:Krad_1185 hypothetical protein YP_003411159.1 KEGG: saq:Sare_4115 hypothetical protein YP_003411160.1 KEGG: ace:Acel_1768 UBA/ThiF-type NAD/FAD binding protein YP_003411161.1 PFAM: ABC-1 domain protein; KEGG: stp:Strop_3736 hypothetical protein YP_003411163.1 PFAM: transcription factor WhiB; AT hook, DNA- binding motif; KEGG: sen:SACE_1093 WhiB-family transcriptional regulator YP_003411165.1 PFAM: UvrD/REP helicase; HRDC domain protein; SMART: HRDC domain protein; KEGG: art:Arth_2753 UvrD/REP helicase YP_003411166.1 TIGRFAM: glutaredoxin-like protein; PFAM: glutaredoxin; KEGG: kra:Krad_1178 glutaredoxin-like protein YP_003411167.1 PFAM: ANTAR domain protein; KEGG: fal:FRAAL6040 hypothetical protein YP_003411168.1 KEGG: sma:SAV_6261 hypothetical protein YP_003411169.1 PFAM: NUDIX hydrolase; NADH pyrophosphatase-like; KEGG: fal:FRAAL0398 NADH pyrophosphatase YP_003411170.1 PFAM: peptidase M16 domain protein; KEGG: fra:Francci3_3795 peptidase M16-like YP_003411171.1 PFAM: peptidase M16 domain protein; KEGG: fra:Francci3_3796 peptidase M16-like YP_003411172.1 KEGG: sgr:SGR_5896 hypothetical protein YP_003411173.1 PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mva:Mvan_4693 protein kinase YP_003411174.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: ace:Acel_1773 peptidase M20 YP_003411175.1 PFAM: alpha/beta hydrolase fold; KEGG: rop:ROP_11220 putative epoxide hydrolase YP_003411176.1 PFAM: UvrD/REP helicase; KEGG: saq:Sare_4130 UvrD/REP helicase YP_003411177.1 PFAM: UvrD/REP helicase; KEGG: saq:Sare_4131 UvrD/REP helicase YP_003411178.1 PFAM: Methylated-DNA-[protein]-cysteine S- methyltransferase DNA binding; KEGG: tfu:Tfu_0522 hypothetical protein YP_003411179.1 KEGG: sen:SACE_3831 hypothetical protein YP_003411180.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: sen:SACE_1070 molybdopterin biosynthesis-like protein MoeZ YP_003411182.1 KEGG: tfu:Tfu_0618 hypothetical protein YP_003411183.1 PFAM: alpha/beta hydrolase fold; KEGG: sgr:SGR_2353 putative hydrolase YP_003411184.1 PFAM: regulatory protein TetR; KEGG: sgr:SGR_2355 TetR family transcriptional regulator YP_003411185.1 KEGG: fre:Franean1_0918 ATP-binding protein YP_003411186.1 KEGG: sma:SAV_3097 hypothetical protein YP_003411187.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: sen:SACE_1060 putative ATP-dependent RNA helicase YP_003411188.1 KEGG: rha:RHA1_ro06355 hypothetical protein YP_003411189.1 PFAM: alpha/beta hydrolase fold; KEGG: fal:FRAAL5710 putative hydrolase YP_003411190.1 PFAM: Protein of unknown function DUF2236; KEGG: sma:SAV_1266 hypothetical protein YP_003411191.1 KEGG: fre:Franean1_0904 hypothetical protein YP_003411192.1 PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein; KEGG: saq:Sare_0681 phosphotransferase domain- containing protein YP_003411193.1 PFAM: membrane-flanked domain; KEGG: fra:Francci3_1279 hypothetical protein YP_003411194.1 KEGG: kra:Krad_0472 hypothetical protein YP_003411195.1 KEGG: sma:SAV_3104 hypothetical protein YP_003411196.1 PFAM: NUDIX hydrolase; KEGG: sen:SACE_1052 NUDIX hydrolase YP_003411197.1 PFAM: MaoC domain protein dehydratase; KEGG: nca:Noca_1459 dehydratase YP_003411198.1 KEGG: kra:Krad_0996 hypothetical protein YP_003411199.1 SMART: HTTM domain protein; KEGG: bcv:Bcav_0819 hypothetical protein YP_003411200.1 KEGG: ace:Acel_0102 hypothetical protein YP_003411201.1 PFAM: cell divisionFtsK/SpoIIIE; Forkhead- associated protein; SMART: Forkhead-associated protein; AAA ATPase; KEGG: ace:Acel_1741 FHA domain-containing protein YP_003411202.1 KEGG: sco:SCO3001 hypothetical protein YP_003411203.1 TIGRFAM: acyltransferase, WS/DGAT/MGAT; PFAM: protein of unknown function UPF0089; KEGG: sen:SACE_6439 hypothetical protein YP_003411204.1 KEGG: fre:Franean1_5832 hypothetical protein YP_003411205.1 PFAM: SAF domain protein; KEGG: kra:Krad_3802 hypothetical protein YP_003411206.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: nca:Noca_1213 DNA binding domain-containing protein YP_003411207.1 KEGG: ace:Acel_1755 hypothetical protein YP_003411208.1 KEGG: mlu:Mlut_14680 hypothetical protein YP_003411209.1 KEGG: ace:Acel_1758 hypothetical protein YP_003411210.1 TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA Wing and Scaffold; SecA preprotein cross-linking region; SEC-C motif domain protein; KEGG: fre:Franean1_5838 preprotein translocase subunit SecA YP_003411211.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; KEGG: kra:Krad_3783 short-chain dehydrogenase/reductase SDR YP_003411212.1 TIGRFAM: PPOX class probable F420-dependent enzyme; PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: sen:SACE_5943 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_003411213.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cms:CMS_1865 putative acetyltransferase YP_003411214.1 TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA; KEGG: stp:Strop_0971 ribosomal subunit interface protein YP_003411215.1 KEGG: fre:Franean1_5842 phosphoribosyltransferase YP_003411216.1 PFAM: Lipoprotein LpqB, beta-propeller domain-like; Lipoprotein LpqB, GerMN domain; KEGG: rop:ROP_63870 hypothetical protein YP_003411217.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: mpa:MAP3359c hypothetical protein YP_003411218.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sen:SACE_6447 two-component response regulator YP_003411219.1 KEGG: tfu:Tfu_2505 S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S- adenosyl-L-homocysteine hydrolase, NAD binding; TrkA-N domain protein; D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_003411220.1 PFAM: Domain of unknown function DUF1994; Excalibur domain protein; KEGG: kra:Krad_0048 Excalibur domain-containing protein YP_003411221.1 KEGG: rop:ROP_39740 hypothetical protein YP_003411222.1 KEGG: ace:Acel_1940 putative acetyltransferase YP_003411223.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; aromatic amino acid beta-eliminating lyase/threonine aldolase; aminotransferase class V; Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: bcv:Bcav_1184 DegT/DnrJ/EryC1/StrS aminotransferase YP_003411224.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: sus:Acid_6205 oxidoreductase domain- containing protein YP_003411225.1 PFAM: glycosyl transferase family 2; KEGG: rop:ROP_39710 putative glycosyltransferase YP_003411226.1 KEGG: rop:ROP_39700 hypothetical membrane protein YP_003411227.1 KEGG: aau:AAur_2671 putative integral membrane protein YP_003411228.1 KEGG: mgi:Mflv_4724 mannose-6-phosphate isomerase, class I; TIGRFAM: mannose-6-phosphate isomerase, class I; PFAM: mannose-6-phosphate isomerase type I YP_003411229.1 KEGG: fre:Franean1_5856 RpiR family transcriptional regulator YP_003411230.1 PFAM: protein of unknown function DUF343; KEGG: saq:Sare_0899 hypothetical protein YP_003411231.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase; KEGG: sco:SCO3028 phosphomannomutase/phosphoglucomutase YP_003411232.1 KEGG: saq:Sare_0891 hypothetical protein YP_003411233.1 KEGG: saq:Sare_0890 hypothetical protein YP_003411234.1 KEGG: cur:cur_1817 putative Fe-S oxidoreductase YP_003411235.1 KEGG: ank:AnaeK_2175 PBS lyase heat domain protein repeat-containing protein YP_003411236.1 PFAM: transcription factor WhiB; KEGG: sen:SACE_6464 WhiB family transcriptional regulator YP_003411237.1 TIGRFAM: LPPG domain protein containing protein; PFAM: protein of unknown function UPF0052 and CofD; KEGG: rop:ROP_63740 LPPG--FO 2-phopspho-L-lactate transferase YP_003411238.1 TIGRFAM: F420-dependent oxidoreductase; PFAM: protein of unknown function DUF129; KEGG: mav:MAV_4225 F420-0--gamma-glutamyl ligase YP_003411239.1 TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; KEGG: cms:CMS_0632 putative nucleotidyl transferase YP_003411240.1 PFAM: GtrA family protein; KEGG: sco:SCO4876 sugar translocase YP_003411241.1 PFAM: glycosyl transferase family 2; KEGG: rsq:Rsph17025_4047 hypothetical protein YP_003411242.1 PFAM: Xylose isomerase domain protein TIM barrel; KEGG: azo:azo3591 sugar or sugar nucleotide oxidoreductase YP_003411243.1 KEGG: pzu:PHZ_c2244 hypothetical protein YP_003411244.1 KEGG: pzu:PHZ_c2246 glycosyl transferase, group 2 family protein YP_003411245.1 PFAM: FAD dependent oxidoreductase; KEGG: sml:Smlt0640 hypothetical protein YP_003411246.1 KEGG: pin:Ping_0448 hypothetical protein YP_003411247.1 KEGG: cmi:CMM_0607 putative DNA repair protein YP_003411248.1 KEGG: cti:RALTA_A2384 hypothetical protein YP_003411249.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: sen:SACE_0092 short-chain dehydrogenase/reductase SDR YP_003411250.1 PFAM: Nucleotidyl transferase; KEGG: pac:PPA1696 mannose-1-phosphate guanylyltransferase YP_003411251.1 PFAM: glycosyl transferase family 2; KEGG: rop:ROP_63700 dTDP-rhamnose--alpha-D-N- acetylglucosamine-diphosphoryl polyprenol, alpha-3-L- rhamnosyl transferase YP_003411252.1 KEGG: sen:SACE_0165 UDP-galactopyranose mutase; TIGRFAM: UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like YP_003411253.1 KEGG: rha:RHA1_ro04054 glycosyltransferase YP_003411254.1 PFAM: glycosyl transferase family 2; KEGG: mjl:Mjls_5373 glycosyl transferase family protein YP_003411255.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cdi:DIP0174 ABC transporter ATP-binding protein YP_003411256.1 PFAM: ABC-2 type transporter; KEGG: cef:CE0178 putative O-antigen export system permease protein YP_003411257.1 KEGG: rha:RHA1_ro04109 glycosyltransferase YP_003411259.1 KEGG: GK16173 gene product from transcript GK16173- RA YP_003411260.1 PFAM: LGFP repeat protein; KEGG: ach:Achl_4447 LGFP repeat protein YP_003411261.1 KEGG: ade:Adeh_4191 zinc finger/thioredoxin putative YP_003411262.1 PFAM: LGFP repeat protein; N-acetylmuramoyl-L- alanine amidase family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: kra:Krad_3877 LGFP repeat-containing protein YP_003411263.1 KEGG: ace:Acel_0416 dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; Male sterility domain; NAD-dependent epimerase/dehydratase YP_003411264.1 TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; Male sterility domain; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; KEGG: ace:Acel_0415 dTDP-glucose 4,6-dehydratase YP_003411265.1 PFAM: acylneuraminate cytidylyltransferase; KEGG: hap:HAPS_0040 CMP-N-acetylneuraminic acid synthetase YP_003411266.1 TIGRFAM: UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing; PFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: dvm:DvMF_1846 UDP-N-acetylglucosamine 2- epimerase YP_003411267.1 PFAM: N-acetylneuraminic acid synthase domain; SAF domain protein; KEGG: dvm:DvMF_1845 N-acylneuraminate-9-phosphate synthase YP_003411268.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: lxx:Lxx20850 LytR family transcriptional regulator YP_003411269.1 KEGG: nfa:nfa46400 hypothetical protein YP_003411270.1 KEGG: art:Arth_1388 3-oxoacid CoA-transferase, A subunit; TIGRFAM: 3-oxoacid CoA-transferase, A subunit; PFAM: coenzyme A transferase YP_003411271.1 KEGG: fre:Franean1_4284 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; PFAM: coenzyme A transferase YP_003411272.1 PFAM: protein of unknown function DUF1028; KEGG: mrd:Mrad2831_4426 hypothetical protein YP_003411273.1 PFAM: HpcH/HpaI aldolase; KEGG: rha:RHA1_ro00775 citrate lyase YP_003411274.1 KEGG: mul:MUP057c lipoprotein YP_003411275.1 PFAM: protein of unknown function DUF421; KEGG: mkm:Mkms_2686 hypothetical protein YP_003411276.1 PFAM: sodium/hydrogen exchanger; KEGG: mjl:Mjls_1002 sodium/hydrogen exchanger YP_003411277.1 KEGG: cef:CE0452 hypothetical protein YP_003411278.1 PFAM: regulatory protein MerR; Transcription regulator MerR DNA binding; SMART: regulatory protein MerR; KEGG: stp:Strop_1645 regulatory protein, MerR YP_003411279.1 PFAM: sulphate transporter; Xanthine/uracil/vitamin C permease; KEGG: stp:Strop_1646 sulphate transporter YP_003411280.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: sen:SACE_3580 acyl-CoA dehydrogenase YP_003411281.1 KEGG: nfa:nfa10010 putative phosphoribosylaminoimidazole carboxylase catalytic subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_003411282.1 KEGG: sen:SACE_6486 phosphoribosylaminoimidazole carboxylase ATPase subunit; TIGRFAM: phosphoribosylaminoimidazole carboxylase, ATPase subunit; PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp YP_003411283.1 PFAM: lipolytic protein G-D-S-L family; KEGG: cmi:CMM_0725 putative esterase YP_003411284.1 PFAM: acyltransferase 3; KEGG: kra:Krad_3889 acyltransferase 3 YP_003411285.1 PFAM: GtrA family protein; KEGG: fal:FRAAL1220 hypothetical protein YP_003411286.1 PFAM: acyltransferase 3; KEGG: kra:Krad_3889 acyltransferase 3 YP_003411287.1 KEGG: sen:SACE_0953 putative ATP-dependent dsDNA exonuclease YP_003411288.1 TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase; KEGG: nfa:nfa47930 putative ATP-dependent dsDNA exonuclease YP_003411289.1 PFAM: membrane-flanked domain; KEGG: saq:Sare_0804 membrane-flanked domain- containing protein YP_003411290.1 TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein; KEGG: tfu:Tfu_2553 biotin--acetyl-CoA-carboxylase ligase YP_003411291.1 PFAM: carboxyl transferase; KEGG: tfu:Tfu_2555 propionyl-CoA carboxylase complex B subunit YP_003411292.1 KEGG: nca:Noca_3496 hypothetical protein YP_003411293.1 TIGRFAM: maf protein; PFAM: Maf family protein; KEGG: stp:Strop_0851 maf protein YP_003411294.1 PFAM: Carbamoyl-phosphate synthase L chain ATP- binding; biotin carboxylase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; biotin/lipoyl attachment domain-containing protein; Carbamoyl-phosphate synthetase large chain domain protein; KEGG: stp:Strop_0849 carbamoyl-phosphate synthase L chain, ATP-binding YP_003411295.1 PFAM: LGFP repeat protein; KEGG: ach:Achl_4447 LGFP repeat protein YP_003411296.1 KEGG: cms:CMS_2737 hypothetical protein YP_003411297.1 PFAM: pyridine nucleotide-disulphide oxidoreductase dimerisation region; FAD-dependent pyridine nucleotide- disulphide oxidoreductase; glucose-inhibited division protein A; FAD dependent oxidoreductase; HI0933 family protein; KEGG: rer:RER_20810 oxidoreductase YP_003411298.1 PFAM: AIG2 family protein; KEGG: sen:SACE_6527 hypothetical protein YP_003411299.1 TIGRFAM: LAO/AO transport system ATPase; PFAM: ArgK protein; KEGG: fal:FRAAL4949 arginine/ornithine transport system ATPase YP_003411300.1 KEGG: sma:SAV_2040 methylmalonyl-CoA mutase; TIGRFAM: methylmalonyl-CoA mutase, large subunit; PFAM: methylmalonyl-CoA mutase; cobalamin B12- binding domain protein YP_003411301.1 PFAM: methylmalonyl-CoA mutase; KEGG: fal:FRAAL4951 methylmalonyl-CoA mutase small subunit (MCM-beta) YP_003411302.1 KEGG: tfu:Tfu_2564 peptidase M20D, amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_003411303.1 PFAM: glutamate--cysteine ligase GCS2; KEGG: fre:Franean1_5927 carboxylate-amine ligase YP_003411304.1 PFAM: peptidase M16 domain protein; KEGG: stp:Strop_2738 peptidase M16 domain- containing protein YP_003411305.1 TIGRFAM: purine nucleotide phosphorylase; inosine guanosine and xanthosine phosphorylase family; PFAM: purine or other phosphorylase family 1; KEGG: mva:Mvan_1610 purine nucleoside phosphorylase YP_003411306.1 PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4- dehydrorhamnose reductase; short-chain dehydrogenase/reductase SDR; KEGG: tfu:Tfu_1140 hypothetical protein YP_003411307.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: stp:Strop_0830 phosphoglucomutase/phosphomannomutase alpha/beta/subunit YP_003411308.1 PFAM: acyltransferase 3; KEGG: art:Arth_2881 acyltransferase 3 YP_003411309.1 TIGRFAM: haloacid dehalogenase, type II; HAD- superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: rxy:Rxyl_0508 haloacid dehalogenase, type II YP_003411310.1 KEGG: nca:Noca_4054 hypothetical protein YP_003411311.1 KEGG: nca:Noca_1511 hypothetical protein YP_003411312.1 PFAM: oxidoreductase domain protein; KEGG: sco:SCO0714 oxidoreductase YP_003411313.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: stp:Strop_0829 uracil phosphoribosyltransferase YP_003411314.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sen:SACE_4184 acetyltransferase (GNAT) family protein YP_003411315.1 KEGG: mth:MTH1801 hypothetical protein YP_003411316.1 KEGG: bcv:Bcav_0208 deoxyribose-phosphate aldolase; TIGRFAM: deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2- dehydro-3-deoxyheptonate aldolase YP_003411317.1 PFAM: Aldehyde Dehydrogenase; KEGG: stp:Strop_0827 aldehyde dehydrogenase YP_003411318.1 KEGG: bcv:Bcav_0211 aldehyde dehydrogenase YP_003411319.1 KEGG: nfa:nfa9540 hypothetical protein YP_003411320.1 PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; KEGG: saq:Sare_4508 DEAD/DEAH box helicase domain- containing protein YP_003411321.1 KEGG: sen:SACE_6573 adenosine deaminase; TIGRFAM: adenosine deaminase; PFAM: adenosine/AMP deaminase YP_003411322.1 PFAM: ABC-2 type transporter; KEGG: saq:Sare_4005 ABC-2 type transporter YP_003411323.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: saq:Sare_4004 ABC transporter related YP_003411324.1 KEGG: nca:Noca_3535 thymidine phosphorylase; TIGRFAM: pyrimidine-nucleoside phosphorylase; PFAM: glycosyl transferase family 3; Pyrimidine nucleoside phosphorylase domain; Glycosyl transferase, family 3-like YP_003411325.1 TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bcv:Bcav_2943 cytidine deaminase YP_003411326.1 PFAM: inner-membrane translocator; KEGG: sgr:SGR_2651 putative sugar ABC transporter permease protein YP_003411327.1 PFAM: inner-membrane translocator; KEGG: sgr:SGR_2652 putative sugar ABC transporter permease protein YP_003411328.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_2653 putative sugar ABC transporter ATP-binding protein YP_003411329.1 PFAM: basic membrane lipoprotein; KEGG: nca:Noca_3541 basic membrane lipoprotein YP_003411330.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: nfa:nfa9380 putative penicillin-binding protein YP_003411331.1 PFAM: ribonuclease BN; KEGG: sen:SACE_6591 tRNA-processing ribonuclease BN YP_003411332.1 PFAM: Phosphoesterase HXTX; KEGG: ace:Acel_0391 2',5' RNA ligase YP_003411333.1 KEGG: sen:SACE_6592 tryptophanyl-tRNA synthetase; TIGRFAM: tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_003411334.1 TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II; KEGG: stp:Strop_4252 histidinol-phosphate aminotransferase YP_003411335.1 TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; dTDP-4- dehydrorhamnose reductase; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility domain; polysaccharide biosynthesis protein CapD; short-chain dehydrogenase/reductase SDR; KEGG: sen:SACE_1774 UDP-glucose 4-epimerase YP_003411336.1 PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; KEGG: ace:Acel_0389 hypothetical protein YP_003411337.1 PFAM: SCP-like extracellular; KEGG: sgr:SGR_1904 hypothetical protein YP_003411338.1 KEGG: kra:Krad_3988 isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent; PFAM: isocitrate/isopropylmalate dehydrogenase YP_003411339.1 KEGG: saq:Sare_4174 lactate/malate dehydrogenase; TIGRFAM: malate dehydrogenase, NAD-dependent; PFAM: Lactate/malate dehydrogenase YP_003411340.1 KEGG: fra:Francci3_0659 hypothetical protein YP_003411341.1 PFAM: tetrahydrofolate dehydrogenase/cyclohydrolase; KEGG: tfu:Tfu_2571 methenyltetrahydrofolate cyclohydrolase YP_003411342.1 KEGG: nfa:nfa54130 hypothetical protein YP_003411343.1 PFAM: pentapeptide repeat protein; KEGG: nca:Noca_3347 pentapeptide repeat-containing protein YP_003411344.1 KEGG: rer:RER_44230 bifunctional purine biosynthesis protein PurH; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein; SMART: AICARFT/IMPCHase bienzyme formylation region YP_003411345.1 TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein; KEGG: nfa:nfa49870 phosphoribosylglycinamide formyltransferase YP_003411346.1 KEGG: stp:Strop_3810 hypothetical protein YP_003411347.1 KEGG: nfa:nfa860 hypothetical protein YP_003411348.1 TIGRFAM: succinyl-CoA synthetase, alpha subunit; PFAM: CoA-binding domain protein; ATP-citrate lyase/succinyl-CoA ligase; KEGG: stp:Strop_3812 succinyl-CoA synthetase subunit alpha YP_003411349.1 KEGG: kra:Krad_3999 succinyl-CoA synthetase subunit beta; TIGRFAM: succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain protein; ATP-citrate lyase/succinyl-CoA ligase YP_003411350.1 PFAM: cobalamin B12-binding domain protein; KEGG: stp:Strop_3814 cobalamin B12-binding domain- containing protein YP_003411351.1 KEGG: mdi:METDI5684 putative glutathione-regulated potassium-efflux system protein (KefB/C-like) YP_003411352.1 PFAM: lipase class 2; Protein of unknown function DUF676 hydrolase domain protein; PGAP1 family protein; KEGG: sco:SCO4799 secreted lipase YP_003411353.1 PFAM: Peptidase M23; KEGG: sen:SACE_6672 metalloendopeptidase-like membrane protein YP_003411354.1 KEGG: hau:Haur_2782 hypothetical protein YP_003411355.1 TIGRFAM: ATP-dependent DNA helicase PcrA; PFAM: UvrD/REP helicase; KEGG: sco:SCO4797 ATP-dependent DNA helicase II YP_003411356.1 TIGRFAM: chorismate mutase; PFAM: Chorismate mutase; KEGG: saq:Sare_4208 chorismate mutase YP_003411357.1 KEGG: pol:Bpro_1646 hypothetical protein YP_003411358.1 PFAM: LmbE family protein; KEGG: ace:Acel_0374 LmbE family protein YP_003411359.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: regulatory protein LuxR; response regulator receiver; KEGG: saq:Sare_4214 two component LuxR family transcriptional regulator YP_003411360.1 PFAM: PspC domain protein; ATP-binding region ATPase domain protein; KEGG: nfa:nfa9020 putative two-component system sensor kinase YP_003411361.1 PFAM: PspC domain protein; KEGG: mab:MAB_3716 hypothetical protein YP_003411363.1 PFAM: Glu/Leu/Phe/Val dehydrogenase ; Glu/Leu/Phe/Val dehydrogenase dimerisation region; KEGG: msm:MSMEG_5442 glutamate dehydrogenase YP_003411364.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gvi:glr3411 hypothetical protein YP_003411366.1 KEGG: fal:FRAAL2851 hypothetical protein YP_003411367.1 TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I; KEGG: tfu:Tfu_2589 GMP synthase YP_003411368.1 TIGRFAM: IMP dehydrogenase family protein; KEGG: stp:Strop_3836 IMP dehydrogenase family protein YP_003411369.1 KEGG: ace:Acel_0366 inosine-5'-monophosphate dehydrogenase; TIGRFAM: inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein; SMART: CBS domain containing protein YP_003411370.1 PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; KEGG: sen:SACE_6712 two-component system response regulator YP_003411371.1 PFAM: transcription factor WhiB; KEGG: fre:Franean1_6000 transcription factor WhiB YP_003411372.1 KEGG: bph:Bphy_1803 hypothetical protein YP_003411373.1 TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1; KEGG: sma:SAV_4992 chaperonin GroEL YP_003411374.1 PFAM: chaperonin Cpn10; KEGG: saq:Sare_4232 chaperonin Cpn10 YP_003411375.1 KEGG: stp:Strop_3843 hypothetical protein YP_003411376.1 KEGG: sgr:SGR_2779 putative O-sialoglycoprotein endopeptidase; TIGRFAM: metalloendopeptidase, glycoprotease family; PFAM: peptidase M22 glycoprotease YP_003411377.1 TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: ach:Achl_2603 ribosomal-protein-alanine acetyltransferase YP_003411378.1 PFAM: peptidase M22 glycoprotease; KEGG: mva:Mvan_1487 peptidase M22, glycoprotease YP_003411379.1 PFAM: NUDIX hydrolase; KEGG: cms:CMS_2175 putative NUDIX hydrolase YP_003411380.1 PFAM: protein of unknown function UPF0079; KEGG: saq:Sare_4245 hypothetical protein YP_003411381.1 TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily; KEGG: ace:Acel_0356 phage SPO1 DNA polymerase- related protein YP_003411382.1 PFAM: alpha/beta hydrolase fold; KEGG: sma:SAV_4968 hydrolase YP_003411383.1 KEGG: fra:Francci3_0622 alanine racemase; TIGRFAM: alanine racemase; PFAM: alanine racemase domain protein YP_003411384.1 TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF- family domain protein; KEGG: sma:SAV_4965 hypothetical protein YP_003411385.1 TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; KEGG: sma:SAV_4964 4'-phosphopantetheinyl transferase YP_003411386.1 TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II; KEGG: sma:SAV_4963 glucosamine--fructose-6- phosphate aminotransferase YP_003411387.1 KEGG: sen:SACE_6779 putative phosphoglucomutase/phosphomannomutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_003411388.1 PFAM: ribosomal protein S9; KEGG: nfa:nfa8670 30S ribosomal protein S9 YP_003411389.1 TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13; KEGG: saq:Sare_4254 50S ribosomal protein L13 YP_003411390.1 PFAM: carbonic anhydrase; KEGG: mva:Mvan_4424 carbonic anhydrase YP_003411391.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: MoeA domain protein domain I and II; MoeA domain protein domain IV; molybdopterin binding domain; KEGG: mab:MAB_0640c molybdopterin biosynthesis protein MoeA YP_003411392.1 TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis MoaC region; KEGG: sgr:SGR_4298 molybdenum cofactor biosynthesis protein C YP_003411393.1 TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; KEGG: sgr:SGR_4299 putative molybdopterin biosynthesis protein YP_003411394.1 TIGRFAM: formate dehydrogenase family accessory protein FdhD; PFAM: formate dehydrogenase subunit FdhD; KEGG: rha:RHA1_ro02584 formate dehydrogenase accessory protein YP_003411395.1 KEGG: stp:Strop_4533 hypothetical protein YP_003411396.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: mjl:Mjls_4805 NAD-dependent epimerase/dehydratase YP_003411397.1 KEGG: fal:FRAAL1112 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_003411398.1 KEGG: hypothetical protein YP_003411399.1 TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17; KEGG: fal:FRAAL1111 50S ribosomal protein L17 YP_003411400.1 KEGG: sen:SACE_6803 DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase alpha subunit domain protein; RNA polymerase dimerisation; SMART: RNA polymerase RpoA/D/Rpb3-type YP_003411401.1 KEGG: ace:Acel_0333 SSU ribosomal protein S4P; TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_003411402.1 TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11; KEGG: fal:FRAAL1108 30S ribosomal protein S11 YP_003411403.1 TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13; KEGG: ace:Acel_0331 30S ribosomal protein S13 YP_003411404.1 TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36; KEGG: pac:PPA1831 50S ribosomal protein L36 YP_003411405.1 TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein; KEGG: mgi:Mflv_4974 translation initiation factor IF-1 YP_003411406.1 KEGG: stp:Strop_3901 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_003411407.1 TIGRFAM: adenylate kinase; PFAM: adenylate kinase; KEGG: tfu:Tfu_2625 adenylate kinase YP_003411408.1 TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein; KEGG: sen:SACE_6813 preprotein translocase subunit SecY YP_003411409.1 TIGRFAM: ribosomal protein L15; PFAM: ribosomal protein L15; KEGG: saq:Sare_4296 ribosomal protein L15 YP_003411410.1 TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30; KEGG: stp:Strop_3905 ribosomal protein L30 YP_003411411.1 TIGRFAM: ribosomal protein S5; PFAM: ribosomal protein S5 domain protein; Ribosomal protein S5; KEGG: fal:FRAAL1098 30S ribosomal protein S5 YP_003411412.1 TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E; KEGG: rer:RER_18690 50S ribosomal protein L18 YP_003411413.1 TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; KEGG: fra:Francci3_0597 50S ribosomal protein L6P YP_003411414.1 PFAM: ribosomal protein S8; KEGG: fra:Francci3_0596 30S ribosomal protein S8 YP_003411415.1 PFAM: ribosomal protein S14; KEGG: mjl:Mjls_1057 30S ribosomal protein S14 YP_003411416.1 PFAM: ribosomal protein L5; KEGG: fra:Francci3_0594 50S ribosomal protein L5 YP_003411417.1 KEGG: saq:Sare_4304 50S ribosomal protein L24; TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; SMART: KOW domain protein YP_003411418.1 TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e; KEGG: fre:Franean1_6039 50S ribosomal protein L14 YP_003411419.1 TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17; KEGG: stp:Strop_3914 ribosomal protein S17 YP_003411420.1 TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29; KEGG: saq:Sare_4307 50S ribosomal protein L29 YP_003411421.1 TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; KEGG: fre:Franean1_6042 50S ribosomal protein L16 YP_003411422.1 KEGG: fal:FRAAL1087 30S ribosomal protein S3; TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; KH type 2 domain protein; Ribosomal protein S3 domain; SMART: KH domain protein YP_003411423.1 TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17; KEGG: nfa:nfa7380 50S ribosomal protein L22 YP_003411424.1 TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15; KEGG: fre:Franean1_6045 ribosomal protein S19 YP_003411425.1 TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2; KEGG: ace:Acel_0309 50S ribosomal protein L2 YP_003411426.1 PFAM: Ribosomal protein L25/L23; KEGG: fra:Francci3_0584 50S ribosomal protein L23 YP_003411427.1 PFAM: ribosomal protein L4/L1e; KEGG: stp:Strop_3922 ribosomal protein L4/L1e YP_003411428.1 TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3; KEGG: sgr:SGR_2834 50S ribosomal protein L3 YP_003411429.1 TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10; KEGG: rop:ROP_61850 30S ribosomal protein S10 YP_003411430.1 TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain protein; elongation factor Tu domain 2 protein; KEGG: sco:SCO4662 elongation factor Tu YP_003411431.1 TIGRFAM: translation elongation factor G; small GTP- binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor G domain protein; elongation factor Tu domain 2 protein; elongation factor G domain IV; KEGG: saq:Sare_4318 translation elongation factor G YP_003411432.1 TIGRFAM: ribosomal protein S7; PFAM: ribosomal protein S7; KEGG: sen:SACE_6840 30S ribosomal protein S7 YP_003411433.1 TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23; KEGG: kra:Krad_0682 30S ribosomal protein S12 YP_003411434.1 KEGG: kra:Krad_0257 hypothetical protein YP_003411435.1 KEGG: kra:Krad_0256 hypothetical protein YP_003411436.1 TIGRFAM: probable F420-dependent oxidoreductase; KEGG: rop:ROP_19710 putative oxidoreductase YP_003411439.1 KEGG: saq:Sare_4324 DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase Rpb1 domain 5; RNA polymerase Rpb1 domain 3; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 4; SMART: RNA polymerase I subunit A domain protein YP_003411440.1 KEGG: sen:SACE_6854 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase Rpb2 domain 7; RNA polymerase Rpb2 domain 3; RNA polymerase Rpb2 domain 2; RNA polymerase beta subunit; DNA- directed RNA polymerase, beta subunit, external 1 domain YP_003411441.1 TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12; KEGG: fra:Francci3_0572 50S ribosomal protein L7/L12 YP_003411442.1 PFAM: ribosomal protein L10; KEGG: fal:FRAAL1068 50S ribosomal protein L10 YP_003411444.1 TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1; KEGG: rer:RER_17180 50S ribosomal protein L1 YP_003411445.1 KEGG: sco:SCO4648 50S ribosomal protein L11; TIGRFAM: ribosomal protein L11; PFAM: ribosomal protein L11; SMART: ribosomal protein L11 YP_003411446.1 KEGG: mkm:Mkms_0939 transcription antitermination protein NusG; TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain protein; SMART: NGN domain protein YP_003411447.1 TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein; KEGG: rop:ROP_16590 preprotein translocase SecE subunit YP_003411448.1 PFAM: aminotransferase class I and II; aromatic amino acid beta-eliminating lyase/threonine aldolase; KEGG: sma:SAV_4907 aspartate aminotransferase YP_003411449.1 PFAM: Peptidase M1 membrane alanine aminopeptidase; KEGG: sen:SACE_3227 hypothetical protein YP_003411450.1 PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO4637 hypothetical protein YP_003411451.1 KEGG: sco:SCO4636 hypothetical protein YP_003411452.1 TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33; KEGG: saq:Sare_4334 ribosomal protein L33 YP_003411453.1 KEGG: stp:Strop_3943 diguanylate cyclase; TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003411454.1 KEGG: fra:Francci3_0788 hypothetical protein YP_003411455.1 PFAM: protein of unknown function DUF520; KEGG: mva:Mvan_0997 putative nucleotide-binding protein YP_003411457.1 PFAM: Transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR; KEGG: nca:Noca_4947 regulatory protein, MerR YP_003411458.1 PFAM: peptidase M48 Ste24p; KEGG: sgr:SGR_2914 heat shock protein HtpX YP_003411459.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: ace:Acel_0284 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein YP_003411460.1 PFAM: thiamine pyrophosphate protein domain protein TPP-binding; KEGG: sen:SACE_3926 2-oxoglutarate ferredoxin oxidoreductase, beta subunit YP_003411461.1 KEGG: hypothetical protein YP_003411462.1 PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH; KEGG: nfa:nfa50160 putative transcriptional regulator YP_003411463.1 KEGG: sen:SACE_6132 hypothetical protein YP_003411464.1 PFAM: glucose sorbosone dehydrogenase; KEGG: rop:ROP_57730 hypothetical protein YP_003411465.1 PFAM: Polyprenyl synthetase; KEGG: ace:Acel_0281 trans- hexaprenyltranstransferase YP_003411466.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: fre:Franean1_6081 NADH dehydrogenase subunit N YP_003411467.1 TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I); KEGG: fre:Franean1_6082 proton-translocating NADH- quinone oxidoreductase, chain M YP_003411468.1 KEGG: fre:Franean1_6083 NADH dehydrogenase subunit L; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; PFAM: NADH/Ubiquinone/plastoquinone (complex I); NADH-Ubiquinone oxidoreductase (complex I) chain 5/L domain protein YP_003411469.1 PFAM: NADH-ubiquinone oxidoreductase chain 4L; KEGG: sen:SACE_6892 NADH dehydrogenase subunit K YP_003411470.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; KEGG: saq:Sare_4454 NADH dehydrogenase subunit J YP_003411471.1 TIGRFAM: NADH-quinone oxidoreductase, chain I; PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ace:Acel_0275 NADH dehydrogenase subunit I YP_003411472.1 PFAM: respiratory-chain NADH dehydrogenase subunit 1; KEGG: saq:Sare_4456 NADH dehydrogenase subunit H YP_003411473.1 TIGRFAM: NADH-quinone oxidoreductase, chain G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; molybdopterin oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; molydopterin dinucleotide-binding region; KEGG: rha:RHA1_ro05915 NADH dehydrogenase subunit G YP_003411474.1 KEGG: sen:SACE_6897 NADH dehydrogenase I chain F; TIGRFAM: NADH-quinone oxidoreductase, F subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; Soluble ligand binding domain YP_003411475.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: fre:Franean1_6090 NADH dehydrogenase subunit E YP_003411476.1 KEGG: sen:SACE_6899 NADH dehydrogenase subunit D; TIGRFAM: NADH dehydrogenase I, D subunit; PFAM: NADH-ubiquinone oxidoreductase chain 49kDa YP_003411477.1 TIGRFAM: NADH (or F420H2) dehydrogenase, subunit C; PFAM: NADH dehydrogenase (ubiquinone) 30 kDa subunit; KEGG: stp:Strop_4063 NADH dehydrogenase subunit C YP_003411478.1 KEGG: saq:Sare_4462 NADH-quinone oxidoreductase, B subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit YP_003411479.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 3; KEGG: saq:Sare_4463 NADH dehydrogenase subunit A YP_003411480.1 TIGRFAM: geranylgeranyl reductase; PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: fra:Francci3_0537 geranylgeranyl reductase YP_003411481.1 TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: mav:MAV_4584 ubiquinone/menaquinone biosynthesis methyltransferase YP_003411482.1 TIGRFAM: isochorismate synthase; PFAM: Chorismate binding-like; KEGG: tfu:Tfu_1413 isochorismate synthase YP_003411483.1 TIGRFAM: 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylic acid synthase/2-oxoglutarate decarboxylase; PFAM: thiamine pyrophosphate protein TPP binding domain protein; KEGG: tfu:Tfu_1411 2-succinyl-6-hydroxy-2,4- cyclohexadiene-1-carboxylate synthase YP_003411484.1 PFAM: Mandelate racemase/muconate lactonizing protein; KEGG: tfu:Tfu_1410 O-succinylbenzoate synthase YP_003411485.1 PFAM: AMP-dependent synthetase and ligase; KEGG: rha:RHA1_ro02011 O-succinylbenzoic acid--CoA ligase YP_003411486.1 TIGRFAM: 1,4-dihydroxy-2-naphthoate octaprenyltransferase; PFAM: UbiA prenyltransferase; KEGG: kra:Krad_0635 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003411487.1 KEGG: nfa:nfa51520 hypothetical protein YP_003411488.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: sma:SAV_4812 transcription regulator AsnC YP_003411489.1 KEGG: nca:Noca_0505 hypothetical protein YP_003411490.1 KEGG: Fjx1; four jointed box 1 (Drosophila) YP_003411491.1 TIGRFAM: cytochrome c-type biogenesis protein CcsB; PFAM: cytochrome c assembly protein; KEGG: mgi:Mflv_0049 cytochrome c assembly protein YP_003411492.1 PFAM: ResB family protein; KEGG: nfa:nfa51560 putative cytochrome c biogenesis membrane protein YP_003411493.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: tfu:Tfu_2703 putative cytochrome c biogenesis membrane protein YP_003411494.1 PFAM: Redoxin domain protein; alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Thioredoxin domain; KEGG: sco:SCO4472 secreted protein YP_003411495.1 PFAM: Phosphoglycerate mutase; KEGG: mmi:MMAR_0871 hypothetical protein YP_003411496.1 TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III; aminotransferase class I and II; KEGG: fal:FRAAL0997 glutamate-1-semialdehyde aminotransferase YP_003411497.1 KEGG: sen:SACE_6938 hypothetical protein YP_003411498.1 PFAM: delta-aminolevulinic acid dehydratase; KEGG: tfu:Tfu_2730 delta-aminolevulinic acid dehydratase YP_003411499.1 PFAM: Uroporphyrinogen III synthase HEM4; Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: mkm:Mkms_0691 uroporphyrinogen-III synthase / uroporphyrinogen-III C-methyltransferase YP_003411500.1 KEGG: nfa:nfa51690 porphobilinogen deaminase; TIGRFAM: porphobilinogen deaminase; PFAM: Porphobilinogen deaminase YP_003411501.1 KEGG: nfa:nfa51700 glutamyl-tRNA reductase; TIGRFAM: glutamyl-tRNA reductase; PFAM: Shikimate/quinate 5-dehydrogenase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase-like YP_003411502.1 PFAM: CoA-binding domain protein; Rex DNA-binding domain protein; KEGG: fal:FRAAL0982 redox-sensing transcriptional repressor REX YP_003411503.1 PFAM: glutaredoxin 2; KEGG: mgi:Mflv_0068 glutaredoxin 2 YP_003411504.1 PFAM: AMP-dependent synthetase and ligase; KEGG: sen:SACE_6950 putative fatty-acid--CoA ligase YP_003411505.1 TIGRFAM: HAD-superfamily subfamily IB hydrolase, TIGR01490; HAD-superfamily hydrolase, subfamily IB (PSPase- like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: sen:SACE_6952 phosphoserine phosphatase YP_003411506.1 PFAM: phospholipid/glycerol acyltransferase; SMART: phospholipid/glycerol acyltransferase; KEGG: sen:SACE_6955 phospholipid/glycerol acyltransferase YP_003411507.1 PFAM: NAD-dependent epimerase/dehydratase; short- chain dehydrogenase/reductase SDR; KEGG: sen:SACE_6956 UDP-glucose 4-epimerase YP_003411508.1 PFAM: Protein of unknown function DUF1713; KEGG: ace:Acel_0243 hypothetical protein YP_003411509.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: kra:Krad_0612 phage transcriptional regulator, AlpA YP_003411510.1 KEGG: sma:SAV_4724 pyrroline-5-carboxylate reductase; TIGRFAM: pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_003411512.1 TIGRFAM: intracellular protease, PfpI family; PFAM: ThiJ/PfpI domain protein; KEGG: rxy:Rxyl_2045 peptidase C56, PfpI YP_003411513.1 KEGG: cur:cur_0218 hypothetical protein YP_003411514.1 PFAM: Ppx/GppA phosphatase; KEGG: mav:MAV_4656 Ppx/GppA phosphatase family protein YP_003411515.1 KEGG: stp:Strop_0338 hypothetical protein YP_003411516.1 PFAM: major facilitator superfamily MFS_1; KEGG: tfu:Tfu_2783 thymidylate kinase YP_003411517.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: dol:Dole_2627 methyltransferase type 11 YP_003411518.1 PFAM: ThiJ/PfpI domain protein; helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: sma:SAV_659 AraC family transcription regulator YP_003411520.1 KEGG: kra:Krad_1041 hypothetical protein YP_003411521.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sgr:SGR_4009 putative two-component system response regulator YP_003411522.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: fal:FRAAL0966 sensor histidine kinase/phosphatase of two-component system for pho regulon (partial match) YP_003411523.1 TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein; KEGG: fra:Francci3_0469 phosphate uptake regulator, PhoU YP_003411524.1 KEGG: sma:SAV_3979 phosphoglyceromutase; TIGRFAM: phosphoglycerate mutase 1 family; PFAM: Phosphoglycerate mutase YP_003411526.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: sgr:SGR_5254 major facilitator superfamily permease YP_003411527.1 PFAM: Protein of unknown function DUF2596; KEGG: saq:Sare_0399 hypothetical protein YP_003411528.1 TIGRFAM: UDP-N-acetylglucosamine; PFAM: glycosyl transferase group 1; KEGG: saq:Sare_0398 glycosyl transferase group 1 YP_003411529.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: nca:Noca_4052 short-chain dehydrogenase/reductase SDR YP_003411530.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cmi:CMM_0772 putative acetyltransferase YP_003411531.1 KEGG: nca:Noca_0672 UDP-N- acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain protein; FAD linked oxidase domain protein YP_003411532.1 KEGG: sen:SACE_6980 hypothetical protein YP_003411533.1 PFAM: EAL domain protein; SMART: EAL domain protein; KEGG: ace:Acel_0529 diguanylate phosphodiesterase YP_003411534.1 PFAM: Protein of unknown function DUF1059; KEGG: fre:Franean1_1096 hypothetical protein YP_003411535.1 PFAM: protein of unknown function DUF1503; KEGG: sco:SCO1068 hypothetical protein YP_003411536.1 KEGG: sco:SCO2803 hypothetical protein YP_003411537.1 PFAM: Appr-1-p processing domain protein; SMART: Appr-1-p processing domain protein; KEGG: sgr:SGR_1202 hypothetical protein YP_003411538.1 PFAM: PspC domain protein; KEGG: kra:Krad_3318 phage shock protein C, PspC YP_003411539.1 KEGG: sco:SCO4200 hypothetical protein YP_003411540.1 KEGG: rha:RHA1_ro02104 hypothetical protein YP_003411541.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: fre:Franean1_6157 XRE family transcriptional regulator YP_003411542.1 PFAM: L-asparaginase II; KEGG: sma:SAV_4025 L-asparaginase II YP_003411543.1 KEGG: sen:SACE_7115 aerial mycelium formation protein YP_003411544.1 TIGRFAM: folate-binding protein YgfZ; PFAM: glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: fra:Francci3_0467 glycine cleavage T protein (aminomethyl transferase) YP_003411545.1 PFAM: ferric-uptake regulator; KEGG: stp:Strop_0312 ferric uptake regulator family protein YP_003411546.1 KEGG: blt:Balat_0142 hypothetical protein YP_003411547.1 KEGG: saq:Sare_3230 hypothetical protein YP_003411548.1 TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein; KEGG: stp:Strop_3005 UDP-N-acetylmuramoyl-L-alanyl- D-glutamate synthetase YP_003411549.1 TIGRFAM: Na+/H+ antiporter NhaA; PFAM: Na+/H+ antiporter NhaA; sodium/hydrogen exchanger; KEGG: rop:ROP_00220 Na(+)/H(+) antiporter YP_003411550.1 KEGG: fre:Franean1_1867 hypothetical protein YP_003411551.1 PFAM: protein of unknown function DUF885; KEGG: sgr:SGR_6254 hypothetical protein YP_003411552.1 PFAM: Domain of unknown function DUF1794; KEGG: nfa:nfa5910 hypothetical protein YP_003411554.1 KEGG: sen:SACE_4472 NAD-dependent epimerase/dehydratase YP_003411555.1 PFAM: regulatory protein TetR; KEGG: nca:Noca_2986 regulatory protein, TetR YP_003411556.1 PFAM: transcriptional regulator PadR family protein; KEGG: sma:SAV_5389 PadR-family transcriptional regulator YP_003411557.1 KEGG: tro:trd_0224 putative ABC superfamily (atp&memb) transport protein YP_003411558.1 KEGG: ret:RHE_CH02708 hypothetical protein YP_003411559.1 KEGG: kra:Krad_0098 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; PAS domain containing protein YP_003411560.1 KEGG: stp:Strop_0297 hypothetical protein YP_003411561.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: rha:RHA1_ro04856 thiosulfate sulfurtransferase YP_003411562.1 KEGG: sco:SCO1084 thioredoxin YP_003411563.1 KEGG: sma:SAV_4038 hypothetical protein YP_003411564.1 KEGG: saq:Sare_0338 hypothetical protein YP_003411565.1 PFAM: transcriptional regulator domain protein; KEGG: ace:Acel_2025 response regulator receiver protein YP_003411566.1 TIGRFAM: mycothiol biosynthesis acetyltransferase; PFAM: GCN5-related N-acetyltransferase; KEGG: fre:Franean1_6177 GCN5-related N- acetyltransferase YP_003411567.1 TIGRFAM: phosphate ABC transporter, periplasmic phosphate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: tfu:Tfu_2740 periplasmic phosphate binding protein YP_003411568.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ach:Achl_0363 phosphate ABC transporter, inner membrane subunit PstC YP_003411569.1 TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: nca:Noca_4261 phosphate ABC transporter, inner membrane subunit PstA YP_003411570.1 KEGG: bcv:Bcav_3423 phosphate ABC transporter, ATPase subunit; TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_003411571.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: rha:RHA1_ro04867 LytR family transcriptional regulator YP_003411572.1 KEGG: sen:SACE_3078 hypothetical protein YP_003411573.1 KEGG: fre:Franean1_6479 hypothetical protein YP_003411574.1 KEGG: mjl:Mjls_2551 hypothetical protein YP_003411575.1 PFAM: Siderophore-interacting protein; FAD-binding 9 siderophore-interacting domain protein; KEGG: rpb:RPB_2699 siderophore-interacting protein YP_003411576.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: stp:Strop_3686 response regulator receiver YP_003411577.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: rop:ROP_48340 two-component histidine kinase PhoR YP_003411578.1 PFAM: thioesterase superfamily protein; KEGG: stp:Strop_2628 thioesterase superfamily protein YP_003411579.1 PFAM: inositol monophosphatase; KEGG: nca:Noca_0913 inositol monophosphatase YP_003411580.1 TIGRFAM: sulfate adenylyltransferase, small subunit; PFAM: phosphoadenosine phosphosulfate reductase; KEGG: stp:Strop_0793 sulfate adenylyltransferase subunit 2 YP_003411581.1 KEGG: nca:Noca_4208 sulfate adenylyltransferase subunit 1; TIGRFAM: sulfate adenylyltransferase, large subunit; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_003411582.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sen:SACE_1160 carbon monoxide dehydrogenase, medium chain YP_003411583.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_1161 putative carbon monoxide dehydrogenase small chain YP_003411584.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: sen:SACE_1162 carbon monoxide dehydrogenase large subunit YP_003411585.1 PFAM: cytochrome P450; KEGG: mpa:MAP2033 hypothetical protein YP_003411587.1 PFAM: ATP-binding region ATPase domain protein; KEGG: fre:Franean1_5624 putative anti-sigma regulatory factor, serine/threonine protein kinase YP_003411588.1 KEGG: kra:Krad_1844 hypothetical protein YP_003411589.1 KEGG: sen:SACE_6203 ATP-dependent helicase; TIGRFAM: ATP-dependent helicase HrpA; PFAM: helicase-associated domain protein; protein of unknown function DUF1605; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein; AAA ATPase YP_003411590.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: kra:Krad_4277 MarR family transcriptional regulator YP_003411591.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: kra:Krad_4278 EmrB/QacA family drug resistance transporter YP_003411592.1 PFAM: Alcohol dehydrogenase GroES domain protein; alanine dehydrogenase/PNT domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: nfa:nfa41080 putative dehydrogenase YP_003411593.1 KEGG: saq:Sare_3637 hypothetical protein YP_003411594.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro02736 acyl CoA dehydrogenase YP_003411596.1 PFAM: major facilitator superfamily MFS_1; KEGG: rop:ROP_60520 putative MFS transporter YP_003411597.1 TIGRFAM: ribonuclease BN; PFAM: ribonuclease BN; KEGG: mjl:Mjls_4719 putative ribonuclease BN YP_003411598.1 PFAM: Hemerythrin HHE cation binding domain protein; KEGG: nfa:nfa11810 hypothetical protein YP_003411599.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: kra:Krad_0228 HAD family hydrolase YP_003411600.1 PFAM: protein of unknown function DUF322; KEGG: nfa:nfa23390 hypothetical protein YP_003411601.1 KEGG: sen:SACE_1867 hypothetical protein YP_003411602.1 KEGG: sen:SACE_1866 hypothetical protein YP_003411603.1 KEGG: fal:FRAAL6272 hypothetical protein YP_003411604.1 PFAM: protein of unknown function DUF322; KEGG: fal:FRAAL6271 hypothetical protein YP_003411605.1 KEGG: fra:Francci3_3954 hypothetical protein YP_003411606.1 KEGG: fal:FRAAL6268 hypothetical protein YP_003411607.1 PFAM: regulatory protein TetR; Tetracyclin repressor domain protein; KEGG: mab:MAB_3216c TetR family transcriptional regulator YP_003411608.1 PFAM: Domain of unknown function DUF2382-like; PRC- barrel domain protein; KEGG: aau:AAur_3970 hypothetical protein YP_003411609.1 KEGG: mno:Mnod_5656 hypothetical protein YP_003411610.1 KEGG: ade:Adeh_0244 LigA YP_003411611.1 PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: sen:SACE_0101 two component system response regulator YP_003411612.1 PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; KEGG: fre:Franean1_5705 integral membrane sensor signal transduction histidine kinase YP_003411613.1 KEGG: kra:Krad_2800 hypothetical protein YP_003411614.1 KEGG: mgi:Mflv_3422 hypothetical protein YP_003411615.1 PFAM: LmbE family protein; KEGG: ace:Acel_0634 LmbE family protein YP_003411616.1 KEGG: ace:Acel_0526 hypothetical protein YP_003411617.1 KEGG: rrs:RoseRS_4621 alpha beta-propellor repeat- containing integrin YP_003411618.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ace:Acel_0639 HAD family hydrolase YP_003411619.1 KEGG: ace:Acel_0638 UDP-N-acetylglucosamine 2- epimerase; TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_003411620.1 PFAM: protein of unknown function DUF201; KEGG: ace:Acel_0637 hypothetical protein YP_003411621.1 KEGG: Gm3773; predicted gene 3773 YP_003411622.1 PFAM: glycosyl transferase family 2; KEGG: ace:Acel_0635 glycosyl transferase family protein YP_003411623.1 PFAM: major facilitator superfamily MFS_1; KEGG: sco:SCO1067 integral membrane transport protein YP_003411624.1 KEGG: ach:Achl_2917 hypothetical protein YP_003411625.1 KEGG: aau:AAur_3997 hypothetical protein YP_003411626.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: bcv:Bcav_2663 protein-tyrosine phosphatase, low molecular weight YP_003411627.1 PFAM: multicopper oxidase type 3; multicopper oxidase type 1; multicopper oxidase type 2; KEGG: art:Arth_4421 multicopper oxidase, type 3 YP_003411628.1 KEGG: fra:Francci3_0140 hypothetical protein YP_003411630.1 PFAM: Stage II sporulation E family protein; SMART: protein phosphatase 2C domain protein; KEGG: fal:FRAAL4021 putative sigma factor PP2C-like phosphatases YP_003411631.1 TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter; KEGG: bmj:BMULJ_02947 AGCS family alanine/glycine/cation symporter YP_003411632.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: sco:SCO6823 transcription regulator ArsR YP_003411633.1 KEGG: bcv:Bcav_2664 FAD dependent oxidoreductase YP_003411634.1 PFAM: major facilitator superfamily MFS_1; KEGG: sen:SACE_4982 integral membrane transport protein YP_003411635.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: rop:ROP_00190 putative arsenate reductase YP_003411636.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: stp:Strop_0634 low molecular weight phosphotyrosine protein phosphatase YP_003411637.1 PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight; KEGG: rop:ROP_00170 putative arsenate reductase YP_003411638.1 TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: kra:Krad_0502 arsenical-resistance protein YP_003411639.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: kra:Krad_0501 regulatory protein ArsR YP_003411640.1 PFAM: GCN5-related N-acetyltransferase; KEGG: saq:Sare_3174 GCN5-related N- acetyltransferase YP_003411641.1 PFAM: integrase family protein; KEGG: fre:Franean1_5518 integrase family protein YP_003411644.1 PFAM: Sulfate transporter/antisigma-factor antagonist STAS; KEGG: sco:SCO5386 anti-sigma factor antagonist YP_003411645.1 PFAM: beta-lactamase; KEGG: rha:RHA1_ro06731 beta-lactamase YP_003411647.1 KEGG: rop:ROP_09400 hypothetical protein YP_003411648.1 PFAM: Rieske [2Fe-2S] iron-sulphur domain; KEGG: cmi:CMM_2102 2Fe-2S domain-containing protein YP_003411649.1 PFAM: metallophosphoesterase; KEGG: stp:Strop_1223 metallophosphoesterase YP_003411650.1 KEGG: saq:Sare_1757 hypothetical protein YP_003411651.1 KEGG: rer:RER_40920 hypothetical protein YP_003411652.1 PFAM: GCN5-related N-acetyltransferase; KEGG: sgr:SGR_3666 putative acetyltransferase YP_003411653.1 KEGG: kra:Krad_4441 hypothetical protein YP_003411654.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fre:Franean1_5951 glyoxalase/bleomycin resistance protein/dioxygenase YP_003411655.1 PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain; KEGG: fre:Franean1_5952 AraC family transcriptional regulator YP_003411656.1 KEGG: nca:Noca_3724 putative phosphodiesterase YP_003411657.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: tfu:Tfu_0109 PASTA YP_003411658.1 PFAM: glucose-methanol-choline oxidoreductase; FAD dependent oxidoreductase; GMC oxidoreductase; KEGG: rop:ROP_61370 putative oxidoreductase YP_003411660.1 PFAM: beta-lactamase domain protein; KEGG: sgr:SGR_3334 putative hydrolase YP_003411661.1 KEGG: tmz:Tmz1t_0654 cytochrome c class I YP_003411662.1 KEGG: bgl:bglu_2g18390 putative transmembrane protein YP_003411663.1 PFAM: Peptidase M23; KEGG: eat:EAT1b_2566 peptidase M23 YP_003411664.1 PFAM: Glu/Leu/Phe/Val dehydrogenase dimerisation region; Glu/Leu/Phe/Val dehydrogenase; KEGG: saq:Sare_0168 Glu/Leu/Phe/Val dehydrogenase dimerisation region YP_003411665.1 PFAM: Domain of unknown function DUF1996; KEGG: sgr:SGR_1138 hypothetical protein YP_003411666.1 KEGG: sco:SCO4088 hypothetical protein YP_003411667.1 KEGG: fal:FRAAL0129 phosphoribosylaminoimidazole synthetase; TIGRFAM: phosphoribosylformylglycinamidine cyclo- ligase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003411668.1 TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase; KEGG: saq:Sare_0163 amidophosphoribosyltransferase YP_003411669.1 KEGG: sgr:SGR_6943 hypothetical protein YP_003411670.1 PFAM: beta-lactamase domain protein; KEGG: sgr:SGR_5825 putative hydrolase YP_003411671.1 TIGRFAM: mycothiol-dependent formaldehyde dehydrogenase; PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: mva:Mvan_3767 alcohol dehydrogenase YP_003411672.1 PFAM: major facilitator superfamily MFS_1; KEGG: kra:Krad_3185 major facilitator transporter YP_003411673.1 KEGG: ach:Achl_1046 hypothetical protein YP_003411674.1 KEGG: sen:SACE_7127 hypothetical protein YP_003411675.1 KEGG: nca:Noca_4326 phosphoribosylformylglycinamidine synthase II; TIGRFAM: phosphoribosylformylglycinamidine synthase II; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_003411676.1 KEGG: saq:Sare_0158 phosphoribosylformylglycinamidine synthase I; TIGRFAM: phosphoribosylformylglycinamidine synthase I; PFAM: CobB/CobQ domain protein glutamine amidotransferase YP_003411677.1 TIGRFAM: phosphoribosylformylglycinamidine synthase, purS; PFAM: phosphoribosylformylglycinamidine synthetase PurS; KEGG: ace:Acel_2076 phosphoribosylformylglycinamidine synthase subunit PurS YP_003411678.1 PFAM: protein of unknown function DUF559; KEGG: aau:AAur_3685 hypothetical protein YP_003411679.1 PFAM: alpha/beta hydrolase fold; KEGG: vap:Vapar_6025 hypothetical protein YP_003411680.1 KEGG: sen:SACE_7150 phosphoribosylaminoimidazole- succinocarboxamide synthase; TIGRFAM: phosphoribosylaminoimidazole- succinocarboxamide synthase; PFAM: SAICAR synthetase YP_003411681.1 TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase; KEGG: tfu:Tfu_3014 adenylosuccinate lyase YP_003411682.1 PFAM: protein of unknown function UPF0118; KEGG: stp:Strop_0279 hypothetical protein YP_003411683.1 KEGG: kra:Krad_2344 hypothetical protein YP_003411684.1 KEGG: stp:Strop_0134 phosphoribosylamine--glycine ligase; TIGRFAM: phosphoribosylamine/glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP- grasp (A) domain; Phosphoribosylglycinamide synthetase, N- domain; Phosphoribosylglycinamide synthetase, C-domain; protein of unknown function DUF201 YP_003411685.1 TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC; KEGG: cak:Caul_1373 ribosome small subunit- dependent GTPase A YP_003411686.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: cak:Caul_4260 glycerophosphoryl diester phosphodiesterase YP_003411687.1 KEGG: rop:ROP_56210 adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase; SMART: adenylosuccinate synthetase YP_003411688.1 KEGG: sen:SACE_7174 hypothetical protein YP_003411689.1 KEGG: nca:Noca_3622 hypothetical protein YP_003411691.1 KEGG: rer:RER_14140 hypothetical protein YP_003411692.1 TIGRFAM: fructose-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II; KEGG: sen:SACE_7180 fructose-bisphosphate aldolase YP_003411693.1 KEGG: fal:FRAAL1624 pentapeptide repeat-containing protein YP_003411694.1 KEGG: stp:Strop_0125 orotate phosphoribosyltransferase; TIGRFAM: orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_003411695.1 PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: nca:Noca_4534 beta-Ig-H3/fasciclin YP_003411696.1 PFAM: beta-Ig-H3/fasciclin; SMART: beta-Ig-H3/fasciclin; KEGG: sgr:SGR_5876 hypothetical protein YP_003411697.1 PFAM: oxidoreductase molybdopterin binding; KEGG: sgr:SGR_1223 putative membrane-bound oxidoreductase YP_003411698.1 KEGG: aau:AAur_3293 hypothetical protein YP_003411699.1 KEGG: sen:SACE_7199 putative Clp protease ATP- binding subunit; TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; Clp domain protein; SMART: AAA ATPase YP_003411700.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: mch:Mchl_2452 transcriptional regulator, MarR family YP_003411701.1 TIGRFAM: peroxiredoxin, OsmC subfamily; PFAM: OsmC family protein; KEGG: nfa:nfa4240 putative osmotically inducible protein YP_003411702.1 PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region; KEGG: kra:Krad_3655 diacylglycerol kinase catalytic region YP_003411703.1 TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1; KEGG: rer:RER_55220 drug resistance efflux protein YP_003411704.1 PFAM: regulatory protein MarR; SMART: regulatory protein MarR; KEGG: sen:SACE_7203 hypothetical protein YP_003411705.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: tfu:Tfu_0849 regulatory proteins, IclR YP_003411706.1 KEGG: tfu:Tfu_0819 malate synthase; TIGRFAM: malate synthase A; PFAM: Malate synthase family protein YP_003411707.1 PFAM: FAD linked oxidase domain protein; KEGG: sen:SACE_6366 glycolate oxidase subunit YP_003411708.1 PFAM: FAD linked oxidase domain protein; KEGG: rxy:Rxyl_2832 FAD linked oxidase-like protein YP_003411709.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: rxy:Rxyl_2831 protein of unknown function DUF224, cysteine-rich region YP_003411710.1 TIGRFAM: L-lactate transport; PFAM: L-lactate permease; KEGG: msm:MSMEG_6826 L-lactate permease YP_003411711.1 PFAM: regulatory protein MarR; regulatory protein ArsR; SMART: regulatory protein MarR; KEGG: sgr:SGR_2219 MarR family transcriptional regulator YP_003411712.1 PFAM: regulatory protein MerR; SMART: regulatory protein MerR; KEGG: sen:SACE_7207 heat shock regulator YP_003411713.1 KEGG: sen:SACE_7208 molecular chaperone; TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; SMART: heat shock protein DnaJ domain protein YP_003411714.1 PFAM: GrpE protein; KEGG: sen:SACE_7209 heat shock protein (HSP-70 cofactor) YP_003411715.1 TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70; KEGG: ace:Acel_2115 molecular chaperone DnaK YP_003411716.1 KEGG: rop:ROP_16860 hypothetical protein YP_003411717.1 PFAM: protein of unknown function DUF224 cysteine- rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: sen:SACE_7220 iron-sulphur-binding reductase YP_003411718.1 PFAM: major facilitator superfamily MFS_1; KEGG: ace:Acel_1218 major facilitator transporter YP_003411719.1 TIGRFAM: deoxycytidine triphosphate deaminase; PFAM: deoxyUTP pyrophosphatase; KEGG: fre:Franean1_0239 deoxycytidine triphosphate deaminase YP_003411720.1 PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; cell surface receptor IPT/TIG domain protein; KEGG: rxy:Rxyl_1295 peptidase S8 and S53, subtilisin, kexin, sedolisin YP_003411721.1 PFAM: ATP-binding region ATPase domain protein; response regulator receiver; histidine kinase A domain protein; SMART: response regulator receiver; histidine kinase A domain protein; ATP-binding region ATPase domain protein; KEGG: mpo:Mpop_0148 response regulator receiver sensor signal transduction histidine kinase YP_003411722.1 KEGG: aau:AAur_3975 hypothetical protein YP_003411724.1 TIGRFAM: modification methylase, HemK family; PFAM: methyltransferase small; KEGG: rop:ROP_41560 putative methyltransferase YP_003411725.1 KEGG: mva:Mvan_1378 UspA domain-containing protein YP_003411726.1 PFAM: ATP-binding region ATPase domain protein; GAF domain protein; histidine kinase dimerisation and phosphoacceptor region; SMART: GAF domain protein; ATP-binding region ATPase domain protein; KEGG: mab:MAB_3890c histidine kinase response regulator YP_003411727.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: ace:Acel_0518 two component LuxR family transcriptional regulator YP_003411728.1 PFAM: chalcone and stilbene synthase domain protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain protein; KEGG: stp:Strop_4264 chalcone/stilbene synthase domain-containing protein YP_003411729.1 PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: stp:Strop_4266 methyltransferase type 11 YP_003411730.1 KEGG: mch:Mchl_0675 putative DNA-binding protein YP_003411731.1 KEGG: kra:Krad_0979 hypothetical protein YP_003411732.1 PFAM: PfkB domain protein; KEGG: mes:Meso_3570 PfkB YP_003411733.1 KEGG: GL17248 gene product from transcript GL17248- RA YP_003411735.1 PFAM: regulatory protein TetR; KEGG: bte:BTH_I2940 TetR family transcriptional regulator YP_003411736.1 KEGG: mjl:Mjls_2771 hypothetical protein YP_003411738.1 KEGG: art:Arth_2421 hypothetical protein YP_003411739.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: sen:SACE_7242 acyl-CoA dehydrogenase YP_003411742.1 PFAM: response regulator receiver; regulatory protein LuxR; Sigma-70 region 4 type 2; SMART: response regulator receiver; regulatory protein LuxR; KEGG: fre:Franean1_0528 two component LuxR family transcriptional regulator YP_003411743.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: sma:SAV_4144 two-component system sensor kinase YP_003411744.1 PFAM: ABC-2 type transporter; KEGG: bcv:Bcav_1586 ABC-2 type transporter YP_003411745.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sgr:SGR_3866 putative ABC transporter ATP- binding protein YP_003411746.1 TIGRFAM: 3-hydroxybutyrate dehydrogenase; PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rxy:Rxyl_2343 3-hydroxybutyrate dehydrogenase YP_003411747.1 PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: saq:Sare_1796 transcriptional regulator, CdaR YP_003411748.1 KEGG: sgr:SGR_382 hypothetical protein YP_003411749.1 KEGG: bcv:Bcav_1559 hypothetical protein YP_003411750.1 PFAM: Tannase and feruloyl esterase; KEGG: bxe:Bxe_C1290 putative tannase and feruloyl esterase YP_003411751.1 KEGG: fre:Franean1_1268 protein tyrosine/serine phosphatase YP_003411752.1 KEGG: rfr:Rfer_2487 response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; GAF domain protein; SMART: GGDEF domain containing protein YP_003411754.1 TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein mobile region; PEP-utilising protein domain protein; KEGG: mgi:Mflv_0749 phosphoenolpyruvate-protein phosphotransferase YP_003411755.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: mjl:Mjls_0072 DeoR family transcriptional regulator YP_003411756.1 TIGRFAM: 1-phosphofructokinase; PFAM: PfkB domain protein; KEGG: mkm:Mkms_0090 ribokinase-like domain- containing protein YP_003411757.1 TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system PTS fructose- specific IIB subunit; phosphotransferase system EIIC; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: rop:ROP_67680 putative fructose-specific phosphotransferase system enzyme II YP_003411758.1 TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr; KEGG: nfa:nfa28530 putative phosphocarrier protein YP_003411759.1 PFAM: cyclase/dehydrase; KEGG: kra:Krad_0825 cyclase/dehydrase YP_003411760.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: tfu:Tfu_1736 hypothetical protein YP_003411761.1 PFAM: catalytic domain of components of various dehydrogenase complexes; biotin/lipoyl attachment domain- containing protein; E3 binding domain protein; KEGG: saq:Sare_0107 dehydrogenase catalytic domain- containing protein YP_003411762.1 PFAM: Transketolase central region; Transketolase domain protein; KEGG: nca:Noca_4508 transketolase, central region YP_003411763.1 KEGG: nca:Noca_4509 pyruvate dehydrogenase (acetyl- transferring); TIGRFAM: pyruvate dehydrogenase (acetyl- transferring) E1 component, alpha subunit; PFAM: dehydrogenase E1 component YP_003411764.1 PFAM: Transcription regulator, AsnC-type-like; SMART: Transcription regulator, AsnC-type; KEGG: msm:MSMEG_2472 AsnC-family protein transcriptional regulator YP_003411765.1 KEGG: cms:CMS_2164 hypothetical protein YP_003411766.1 KEGG: amr:AM1_4443 hypothetical protein YP_003411767.1 KEGG: mmi:MMAR_2613 hypothetical protein YP_003411768.1 PFAM: beta-lactamase; KEGG: sen:SACE_6348 beta-lactamase YP_003411769.1 KEGG: sco:SCO5905 export protein YP_003411770.1 PFAM: NLP/P60 protein; KEGG: mkm:Mkms_3349 NLP/P60 protein YP_003411772.1 KEGG: nca:Noca_1339 FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_003411773.1 PFAM: ribonuclease BN; KEGG: fal:FRAAL1679 putative glycosyl transferase YP_003411774.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: rer:RER_04630 penicillin-binding protein 1 YP_003411775.1 KEGG: saq:Sare_4482 hypothetical protein YP_003411776.1 KEGG: saq:Sare_3302 hypothetical protein YP_003411777.1 PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein; KEGG: fra:Francci3_1483 rhodanese-like protein YP_003411778.1 PFAM: major facilitator superfamily MFS_1; KEGG: sma:SAV_2408 transmembrane efflux protein YP_003411779.1 PFAM: phosphoenolpyruvate carboxykinase (GTP); KEGG: saq:Sare_0807 phosphoenolpyruvate carboxykinase YP_003411780.1 PFAM: Activator of Hsp90 ATPase 1 family protein; KEGG: bcv:Bcav_0343 activator of HSP90 ATPase 1 family protein YP_003411781.1 PFAM: regulatory protein ArsR; transcriptional regulator TrmB; SMART: regulatory protein ArsR; KEGG: bcv:Bcav_0344 transcriptional regulator, ArsR family YP_003411782.1 KEGG: hypothetical protein YP_003411783.1 KEGG: mav:MAV_2170 acyl carrier protein YP_003411784.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: rha:RHA1_ro01277 2-nitropropane dioxygenase YP_003411785.1 PFAM: DSBA oxidoreductase; KEGG: rsa:RSal33209_0165 FrnE YP_003411786.1 PFAM: peptidylprolyl isomerase FKBP-type; KEGG: saq:Sare_2244 peptidylprolyl isomerase FKBP- type YP_003411787.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: fal:FRAAL1293 glyoxalase family protein YP_003411788.1 PFAM: short-chain dehydrogenase/reductase SDR; KR domain protein; NAD-dependent epimerase/dehydratase; KEGG: pol:Bpro_0239 short-chain dehydrogenase/reductase SDR YP_003411789.1 PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: art:Arth_0913 alpha amylase, catalytic region YP_003411790.1 PFAM: major facilitator superfamily MFS_1; KEGG: ach:Achl_0532 major facilitator superfamily MFS_1 YP_003411791.1 PFAM: acyl-CoA dehydrogenase domain protein; KEGG: mrd:Mrad2831_2474 acyl-CoA dehydrogenase domain-containing protein YP_003411792.1 PFAM: regulatory protein DeoR; Helix-turn-helix type 11 domain protein; SMART: regulatory protein DeoR; KEGG: tfu:Tfu_1854 regulatory protein, DeoR YP_003411793.1 KEGG: scl:sce5348 hypothetical protein YP_003411794.1 TIGRFAM: acetoacetyl-CoA synthase; PFAM: AMP-dependent synthetase and ligase; KEGG: sco:SCO1393 acetoacetyl-CoA synthetase YP_003411795.1 PFAM: Protein of unknown function DUF2237; KEGG: fra:Francci3_2396 hypothetical protein YP_003411796.1 PFAM: glutathione peroxidase; KEGG: mav:MAV_4129 glutathione peroxidase family protein YP_003411797.1 KEGG: nca:Noca_2082 hypothetical protein YP_003411798.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: tfu:Tfu_1625 hypothetical protein YP_003411799.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: smd:Smed_2061 glyoxalase/bleomycin resistance protein/dioxygenase YP_003411800.1 TIGRFAM: choline/carnitine/betaine transporter; PFAM: BCCT transporter; KEGG: nca:Noca_2609 choline/carnitine/betaine transporter YP_003411801.1 KEGG: bpu:BPUM_0363 APC family amino acid-polyamine- organocation transporter YP_003411802.1 KEGG: nfa:nfa53170 hypothetical protein YP_003411803.1 PFAM: MscS Mechanosensitive ion channel; KEGG: rop:ROP_64620 putative MscS family transporter YP_003411804.1 KEGG: fre:Franean1_7240 putative RNA polymerase sigma factor YP_003411805.1 PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: sma:SAV_5335 oxidoreductase YP_003411806.1 KEGG: rop:ROP_62960 O-acetylhomoserine (thiol)- lyase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate- dependent protein YP_003411807.1 KEGG: fre:Franean1_4254 homoserine O- acetyltransferase; TIGRFAM: homoserine O-acetyltransferase; PFAM: alpha/beta hydrolase fold YP_003411808.1 KEGG: rer:RER_17480 hypothetical protein YP_003411809.1 KEGG: hypothetical protein YP_003411810.1 PFAM: amino acid permease-associated region; KEGG: sgr:SGR_3504 putative amino acid transporter YP_003411811.1 PFAM: NLP/P60 protein; KEGG: nfa:nfa17200 hypothetical protein YP_003411812.1 KEGG: kra:Krad_3957 hypothetical protein YP_003411814.1 KEGG: sma:SAV_6460 hypothetical protein YP_003411815.1 PFAM: peptidase U62 modulator of DNA gyrase; KEGG: sco:SCO1816 hypothetical protein YP_003411817.1 KEGG: mgi:Mflv_2585 protein Pfam: Lactamase_B YP_003411818.1 KEGG: stp:Strop_4241 hypothetical protein YP_003411819.1 PFAM: Endoribonuclease L-PSP; KEGG: saq:Sare_4670 endoribonuclease L-PSP YP_003411820.1 PFAM: amidohydrolase; adenosine/AMP deaminase; Amidohydrolase 3; KEGG: sen:SACE_7247 N-ethylammeline chlorohydrolase YP_003411821.1 PFAM: SNARE associated Golgi protein; KEGG: krh:KRH_22460 hypothetical protein YP_003411822.1 TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 2 (HAD-like); PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: afw:Anae109_1202 haloacid dehalogenase, type II YP_003411823.1 KEGG: sen:SACE_6432 hypothetical protein YP_003411824.1 PFAM: carbon monoxide dehydrogenase subunit G; KEGG: sen:SACE_0539 carbon monoxide dehydrogenase subunit G YP_003411825.1 PFAM: molybdopterin dehydrogenase FAD-binding; CO dehydrogenase flavoprotein domain protein; KEGG: sen:SACE_0538 carbon monoxide dehydrogenase medium subunit YP_003411826.1 PFAM: aldehyde oxidase and xanthine dehydrogenase molybdopterin binding; aldehyde oxidase and xanthine dehydrogenase a/b hammerhead; KEGG: rop:ROP_50430 putative carbon monoxide dehydrogenase large subunit YP_003411827.1 PFAM: [2Fe-2S]-binding domain protein; ferredoxin; KEGG: sen:SACE_0536 carbon monoxide dehydrogenase small chain YP_003411828.1 PFAM: major facilitator superfamily MFS_1; KEGG: nca:Noca_3560 major facilitator transporter YP_003411829.1 PFAM: GAF domain protein; KEGG: rop:ROP_61380 hypothetical protein YP_003411830.1 PFAM: glycosyl transferase family 2; KEGG: mab:MAB_3831c putative glycosyltransferase YP_003411831.1 PFAM: isochorismatase hydrolase; KEGG: kra:Krad_0796 isochorismatase hydrolase YP_003411832.1 PFAM: Creatininase; KEGG: rha:RHA1_ro06077 hypothetical protein YP_003411833.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: rha:RHA1_ro06076 2,4-dienoyl-CoA reductase YP_003411834.1 KEGG: rha:RHA1_ro06045 hypothetical protein YP_003411835.1 SMART: HNH nuclease; KEGG: fal:FRAAL3457 hypothetical protein YP_003411836.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN- binding; KEGG: art:Arth_0043 pyridoxamine 5'-phosphate oxidase-related, FMN-binding YP_003411837.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; FAD- dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fal:FRAAL4319 hypothetical protein YP_003411838.1 PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: rha:RHA1_ro06072 coenzyme synthesis protein YP_003411839.1 KEGG: mab:MAB_3836c hypothetical protein YP_003411840.1 KEGG: rer:RER_17970 hypothetical protein YP_003411841.1 PFAM: regulatory protein TetR; KEGG: fal:FRAAL4318 TetR family transcriptional regulator YP_003411842.1 PFAM: aldo/keto reductase; KEGG: vap:Vapar_6037 aldo/keto reductase YP_003411843.1 PFAM: response regulator receiver; regulatory protein LuxR; SMART: regulatory protein LuxR; response regulator receiver; KEGG: rop:ROP_61210 putative NarL family two- component response regulator YP_003411844.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; GAF domain protein; ATP-binding region ATPase domain protein; KEGG: rop:ROP_61200 putative two-component histidine kinase YP_003411845.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: mva:Mvan_5476 iron-containing alcohol dehydrogenase YP_003411846.1 KEGG: sgr:SGR_816 putative aminotransferase; TIGRFAM: cysteine desulfurase family protein; PFAM: aminotransferase class V YP_003411848.1 PFAM: monooxygenase FAD-binding; FAD dependent oxidoreductase; KEGG: mmi:MMAR_2987 3-(3-hydroxyphenyl)propionate hydroxylase YP_003411849.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: rer:RER_54160 zinc-containing alcohol dehydrogenase YP_003411850.1 PFAM: ATPase associated with various cellular activities AAA_5; ATPase associated with various cellular activities AAA_3; SMART: AAA ATPase; KEGG: nfa:nfa11980 hypothetical protein YP_003411851.1 PFAM: von Willebrand factor type A; VWA containing CoxE family protein; SMART: von Willebrand factor type A; KEGG: nfa:nfa11990 hypothetical protein YP_003411853.1 PFAM: protein of unknown function DUF182; KEGG: sen:SACE_0535 xanthine dehydrogenase accessory factor YP_003411854.1 PFAM: VWA containing CoxE family protein; KEGG: rha:RHA1_ro04978 hypothetical protein YP_003411855.1 PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: sen:SACE_0533 ATPase YP_003411856.1 PFAM: Domain of unknown function DUF2382-like; PRC- barrel domain protein; KEGG: sco:SCO0919 hypothetical protein YP_003411857.1 KEGG: sgr:SGR_4991 hypothetical protein YP_003411858.1 PFAM: aldo/keto reductase; KEGG: mkm:Mkms_1378 2,5-didehydrogluconate reductase YP_003411859.1 PFAM: GCN5-related N-acetyltransferase; KEGG: stp:Strop_2364 GCN5-related N- acetyltransferase YP_003411860.1 PFAM: major facilitator superfamily MFS_1; KEGG: bcv:Bcav_0371 major facilitator superfamily MFS_1 YP_003411861.1 KEGG: hypothetical protein YP_003411862.1 KEGG: tfu:Tfu_1348 molybdenum cofactor biosynthesis protein A; TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: molybdenum cofactor synthesis domain protein; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_003411863.1 PFAM: thiamineS protein; KEGG: saq:Sare_5047 thiamineS protein YP_003411865.1 PFAM: GAF domain protein; KEGG: cyn:Cyan7425_0280 diguanylate cyclase with GAF sensor YP_003411866.1 KEGG: art:Arth_3389 hypothetical protein YP_003411867.1 PFAM: molybdopterin biosynthesis MoaE protein; KEGG: stp:Strop_4546 molybdopterin biosynthesis MoaE protein YP_003411868.1 KEGG: sen:SACE_1257 hypothetical protein YP_003411869.1 PFAM: ABC transporter related; TOBE domain protein; Transport-associated OB domain protein; SMART: AAA ATPase; KEGG: nfa:nfa43300 putative ABC transporter ATP- binding protein YP_003411870.1 TIGRFAM: molybdate ABC transporter, inner membrane subunit; NifC-like ABC-type porter; PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV_1720 ABC transporter permease protein YP_003411871.1 TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1; KEGG: nfa:nfa43280 putative transporter YP_003411872.1 TIGRFAM: DNA binding domain protein, excisionase family; PFAM: TOBE domain protein; regulatory protein MerR; KEGG: nfa:nfa43270 putative transporter YP_003411873.1 KEGG: rxy:Rxyl_2783 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s); TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; MASE1 domain protein; SMART: EAL domain protein; GGDEF domain containing protein YP_003411874.1 KEGG: fal:FRAAL0737 putative ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase, RecQ family; PFAM: helicase domain protein; DEAD/DEAH box helicase domain protein; SMART: helicase domain protein; DEAD-like helicase YP_003411875.1 PFAM: Carbamoyltransferase; KEGG: sco:SCO6180 transferase YP_003411876.1 KEGG: bcv:Bcav_3158 hypothetical protein YP_003411878.1 PFAM: acyl-CoA dehydrogenase domain protein; Acyl- CoA dehydrogenase type 2 domain; KEGG: tfu:Tfu_2485 acyl-CoA dehydrogenase YP_003411879.1 PFAM: Domain of unknown function DUF1801; KEGG: scl:sce5975 hypothetical protein YP_003411881.1 TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator; KEGG: nca:Noca_2614 cell envelope-related transcriptional attenuator YP_003411882.1 TIGRFAM: exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: kra:Krad_4198 exodeoxyribonuclease III Xth YP_003411883.1 PFAM: protein of unknown function DUF81; KEGG: cmi:CMM_1128 hypothetical protein YP_003411884.1 PFAM: Radical SAM domain protein; KEGG: kra:Krad_4460 radical SAM domain-containing protein YP_003411885.1 TIGRFAM: formaldehyde dehydrogenase, glutathione- independent; PFAM: Alcohol dehydrogenase GroES domain protein; Alcohol dehydrogenase zinc-binding domain protein; KEGG: aau:AAur_0480 glutathione-independent formaldehyde dehydrogenase YP_003411886.1 PFAM: protein of unknown function DUF328; KEGG: sen:SACE_5940 hypothetical protein YP_003411887.1 KEGG: kra:Krad_2025 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; PAS fold-3 domain protein; GAF domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; GAF domain protein; PAS domain containing protein YP_003411888.1 PFAM: Amidase; KEGG: rxy:Rxyl_0238 amidase YP_003411889.1 KEGG: sco:SCO6238 hypothetical protein YP_003411890.1 PFAM: NAD-glutamate dehydrogenase; KEGG: sma:SAV_5075 NAD-glutamate dehydrogenase YP_003411891.1 PFAM: membrane protein of unknown function; KEGG: nfa:nfa51480 hypothetical protein YP_003411892.1 PFAM: putative thiol-disulphide oxidoreductase DCC; KEGG: sen:SACE_6525 hypothetical protein YP_003411893.1 KEGG: nfa:nfa55970 hypothetical protein YP_003411894.1 PFAM: alpha/beta hydrolase fold; KEGG: tfu:Tfu_0079 alpha/beta hydrolase superfamily protein YP_003411895.1 PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-4 domain protein; SMART: protein phosphatase 2C domain protein; KEGG: kra:Krad_0098 putative PAS/PAC sensor protein YP_003411896.1 PFAM: ATP-binding region ATPase domain protein; KEGG: sgr:SGR_978 regulatory protein YP_003411897.1 KEGG: nca:Noca_3594 hypothetical protein YP_003411898.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: nca:Noca_3595 response regulator receiver YP_003411899.1 KEGG: nca:Noca_3596 hypothetical protein YP_003411900.1 PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: kra:Krad_0323 response regulator receiver protein YP_003411901.1 KEGG: kra:Krad_0322 protein-glutamate O- methyltransferase; PFAM: MCP methyltransferase CheR-type; SMART: MCP methyltransferase CheR-type YP_003411902.1 PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver; KEGG: kra:Krad_0321 response regulator receiver modulated CheB methylesterase YP_003411903.1 PFAM: Nucleotidyl transferase; KEGG: ddr:Deide_17490 putative glucose-1-phosphate adenylyltransferase (ADP-glucose diphosphorylase, ADP- glucose synthase) YP_003411904.1 KEGG: nca:Noca_3600 hypothetical protein YP_003411905.1 PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: nca:Noca_3603 CheW protein YP_003411906.1 PFAM: CheW domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; ATP- binding region ATPase domain protein; SMART: CheW domain protein; ATP-binding region ATPase domain protein; Hpt domain protein; KEGG: nca:Noca_3604 ATPase domain-containing protein YP_003411907.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: nca:Noca_3602 chemotaxis sensory transducer YP_003411908.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: kra:Krad_2095 methyl-accepting chemotaxis sensory transducer YP_003411909.1 PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; KEGG: kra:Krad_2095 methyl-accepting chemotaxis sensory transducer YP_003411910.1 TIGRFAM: trehalose-phosphatase; HAD-superfamily hydrolase, subfamily IIB; PFAM: trehalose-phosphatase; KEGG: saq:Sare_3919 HAD family hydrolase YP_003411911.1 PFAM: glycosyl transferase family 20; glycosyl transferase group 1; KEGG: saq:Sare_3918 alpha,alpha-trehalose-phosphate synthase (UDP-forming) YP_003411912.1 TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein; KEGG: saq:Sare_2698 CrcB protein YP_003411913.1 PFAM: Camphor resistance CrcB protein; KEGG: saq:Sare_2697 camphor resistance CrcB protein YP_003411914.1 PFAM: Integral membrane protein TerC; KEGG: art:Arth_3613 integral membrane protein TerC YP_003411915.1 KEGG: art:Arth_3612 hypothetical protein YP_003411916.1 TIGRFAM: GNAT-family acetyltransferase TIGR03103; PFAM: GCN5-related N-acetyltransferase; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; KEGG: kra:Krad_3397 GCN5-related N- acetyltransferase YP_003411917.1 TIGRFAM: asparagine synthase family amidotransferase; asparagine synthase (glutamine- hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II; KEGG: kra:Krad_3398 asparagine synthase (glutamine- hydrolyzing) YP_003411918.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: kra:Krad_1039 alcohol dehydrogenase YP_003411919.1 PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; KEGG: mkm:Mkms_2769 XRE family transcriptional regulator YP_003411920.1 KEGG: sen:SACE_7095 isomerase YP_003411921.1 PFAM: protein of unknown function DUF1330; KEGG: pde:Pden_4583 hypothetical protein YP_003411923.1 PFAM: TAP domain protein; alpha/beta hydrolase fold; KEGG: bcv:Bcav_0220 TAP domain protein YP_003411924.1 PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pde:Pden_0297 ABC transporter related YP_003411925.1 PFAM: transport system permease protein; KEGG: ach:Achl_3785 transport system permease protein YP_003411926.1 PFAM: transport system permease protein; KEGG: atc:AGR_C_4489 ferrichrome ABC transporter (permease) YP_003411927.1 PFAM: periplasmic binding protein; KEGG: saq:Sare_2404 periplasmic binding protein YP_003411928.1 PFAM: aldo/keto reductase; KEGG: kra:Krad_0434 aldo/keto reductase YP_003411929.1 KEGG: tfu:Tfu_0356 putative integral membrane protein YP_003411930.1 KEGG: aau:AAur_1567 putative integral membrane protein YP_003411931.1 KEGG: kra:Krad_3420 hypothetical protein YP_003411932.1 KEGG: kra:Krad_0347 putative PAS/PAC sensor protein; TIGRFAM: PAS sensor protein; PFAM: Stage II sporulation E family protein; GAF domain protein; PAS fold-3 domain protein; PAS fold-4 domain protein; PAS fold domain protein; SMART: protein phosphatase 2C domain protein; PAC repeat-containing protein; GAF domain protein YP_003411933.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: rha:RHA1_ro00385 nitrilotriacetate monooxygenase component B YP_003411934.1 PFAM: pyruvate carboxyltransferase; KEGG: mjl:Mjls_1558 hydroxymethylglutaryl-CoA lyase YP_003411935.1 KEGG: kra:Krad_3390 diguanylate cyclase with PAS/PAC sensor; TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold-3 domain protein; PAS fold domain protein; PAS fold-4 domain protein; SMART: GGDEF domain containing protein; PAC repeat- containing protein; PAS domain containing protein YP_003411936.1 PFAM: peptidase M20; peptidase dimerisation domain protein; KEGG: rer:RER_52790 hydrolase YP_003411937.1 PFAM: FAD dependent oxidoreductase; KEGG: sen:SACE_6515 glycerol-3-phosphate dehydrogenase YP_003411938.1 PFAM: Transcriptional regulator IclR ; regulatory protein IclR; SMART: regulatory protein IclR; KEGG: saq:Sare_4608 IclR family transcriptional regulator YP_003411939.1 TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: stp:Strop_0497 glycerol kinase YP_003411940.1 PFAM: major intrinsic protein; KEGG: art:Arth_2249 major intrinsic protein YP_003411941.1 TIGRFAM: glycerol kinase; PFAM: Carbohydrate kinase, FGGY-like; KEGG: bcv:Bcav_3291 glycerol kinase YP_003411942.1 TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase ; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: mgi:Mflv_4406 phosphoglucomutase YP_003411943.1 KEGG: mab:MAB_3781 hypothetical protein YP_003411944.1 TIGRFAM: cob(II)yrinic acid a,c-diamide reductase; PFAM: Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase; nitroreductase; KEGG: pac:PPA0953 phosphoribosyltransferase YP_003411945.1 PFAM: alpha/beta hydrolase fold; PGAP1 family protein; KEGG: nca:Noca_1790 alpha/beta hydrolase fold YP_003411946.1 SMART: DEAD-like helicase; KEGG: rer:RER_44520 hypothetical protein YP_003411947.1 PFAM: protein of unknown function DUF81; KEGG: rha:RHA1_ro03933 hypothetical protein YP_003411948.1 KEGG: kra:Krad_0853 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_003411949.1 TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: kra:Krad_0854 phosphomethylpyrimidine kinase YP_003411950.1 PFAM: UMUC domain protein DNA-repair protein; KEGG: nca:Noca_2975 DNA polymerase IV YP_003411951.1 KEGG: kra:Krad_4543 isoprenylcysteine carboxyl methyltransferase YP_003411952.1 PFAM: cation efflux protein; KEGG: kra:Krad_4552 cation efflux protein YP_003411953.1 PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR; KEGG: kra:Krad_4577 regulatory protein ArsR YP_003411955.1 PFAM: Methyltransferase type 12; Methyltransferase type 11; KEGG: mjl:Mjls_1215 methyltransferase type 11 YP_003411957.1 KEGG: stp:Strop_2075 hypothetical protein YP_003411958.1 PFAM: Oxidoreductase FAD-binding domain protein; ferredoxin; oxidoreductase FAD/NAD(P)-binding domain protein; KEGG: saq:Sare_2219 oxidoreductase FAD-binding subunit YP_003411959.1 PFAM: fatty acid desaturase; KEGG: nca:Noca_4480 fatty acid desaturase YP_003411961.1 KEGG: mpa:MAP0071 hypothetical protein; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein; SMART: Hedgehog/intein hint domain protein YP_003411962.1 PFAM: Endoribonuclease L-PSP; KEGG: mch:Mchl_5535 endoribonuclease L-PSP YP_003411963.1 TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like; KEGG: fre:Franean1_7309 ribosomal protein L9 YP_003411964.1 TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18; KEGG: sma:SAV_4287 30S ribosomal protein S18 YP_003411965.1 TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n; KEGG: mmi:MMAR_0073 single-stranded DNA-binding protein YP_003411966.1 TIGRFAM: ribosomal protein S6; PFAM: ribosomal protein S6; KEGG: stp:Strop_4556 30S ribosomal protein S6 YP_003411967.1 PFAM: Xylose isomerase domain protein TIM barrel; SMART: AP endonuclease family 2; KEGG: sen:SACE_7353 endonuclease IV YP_003411968.1 KEGG: sen:SACE_7355 hypothetical protein YP_003411969.1 PFAM: glycosyl transferase family 51; penicillin- binding protein transpeptidase; KEGG: nfa:nfa55570 putative penicillin-binding protein YP_003411970.1 KEGG: rha:RHA1_ro03442 hypothetical protein YP_003411971.1 PFAM: transcriptional regulator PadR family protein; KEGG: saq:Sare_5080 PadR-like family transcriptional regulator YP_003411972.1 TIGRFAM: inositol 1-phosphate synthase; PFAM: Myo-inositol-1-phosphate synthase; Myo- inositol-1-phosphate synthase GAPDH domain protein; KEGG: fra:Francci3_4529 myo-inositol-1-phosphate synthase YP_003411974.1 PFAM: protein of unknown function DUF179; KEGG: sen:SACE_7376 hypothetical protein YP_003411975.1 PFAM: major facilitator superfamily MFS_1; KEGG: tfu:Tfu_3101 hypothetical protein YP_003411976.1 KEGG: ach:Achl_0212 peptidase metallopeptidase YP_003411977.1 KEGG: rha:RHA1_ro03641 tRNA nucleotidyltransferase; TIGRFAM: tRNA adenylyltransferase; metal dependent phophohydrolase; PFAM: Polynucleotide adenylyltransferase region; metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_003411978.1 PFAM: NUDIX hydrolase; KEGG: nfa:nfa56570 hypothetical protein YP_003411979.1 KEGG: rha:RHA1_ro03643 glycoprotein YP_003411980.1 TIGRFAM: integral membrane protein MviN; PFAM: virulence factor MVIN family protein; KEGG: sen:SACE_7380 hypothetical protein YP_003411981.1 KEGG: stp:Strop_4576 serine/threonine protein kinase YP_003411982.1 TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: fra:Francci3_4536 thioredoxin reductase YP_003411983.1 TIGRFAM: thioredoxin; PFAM: Thioredoxin domain; KEGG: sen:SACE_7385 thioredoxin reductase YP_003411984.1 PFAM: cell wall hydrolase/autolysin; Peptidoglycan- binding domain 1 protein; SMART: cell wall hydrolase/autolysin; KEGG: sen:SACE_7386 N-acetylmuramoyl-L-alanine amidase YP_003411985.1 PFAM: aminotransferase class I and II; KEGG: nca:Noca_4690 aminotransferase, class I and II YP_003411986.1 PFAM: D-alanine--D-alanine ligase domain protein; ATP-dependent carboxylate-amine ligase domain protein ATP- grasp; protein of unknown function DUF201; KEGG: stp:Strop_4584 D-alanine--D-alanine ligase YP_003411987.1 KEGG: nfa:nfa56660 putative chromosome partitioning protein; TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_003411988.1 PFAM: Cobyrinic acid ac-diamide synthase; KEGG: saq:Sare_5105 cobyrinic acid ac-diamide synthase YP_003411989.1 TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein; Methyltransferase type 12; KEGG: mgi:Mflv_0833 16S rRNA methyltransferase GidB YP_003411990.1 PFAM: single-stranded nucleic acid binding R3H domain protein; SMART: single-stranded nucleic acid binding R3H domain protein; KEGG: rha:RHA1_ro03661 RNA-binding protein Jag YP_003411991.1 TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein; KEGG: saq:Sare_5108 60 kDa inner membrane insertion protein YP_003411992.1 PFAM: protein of unknown function DUF37; KEGG: sen:SACE_7395 hypothetical protein YP_003411993.1 TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein; KEGG: cdi:DIP2381 ribonuclease P YP_003411994.1 TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34; KEGG: mab:MAB_4955c 50S ribosomal protein L34