-- dump date 20140619_100750 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_003373275.1 283782521 8710080 complement(12..914) 1 NC_013721.1 identified by match to protein family HMM PF00126; match to protein family HMM PF03466; LysR family transcriptional regulator 914 lysR 8710080 lysR Gardnerella vaginalis 409-05 LysR family transcriptional regulator YP_003373275.1 12 R 553190 CDS YP_003373276.1 283782522 8709300 complement(956..2629) 1 NC_013721.1 identified by match to protein family HMM PF00070; match to protein family HMM PF07992; match to protein family HMM TIGR03140; alkyl hydroperoxide reductase 2629 ahpF 8709300 ahpF Gardnerella vaginalis 409-05 alkyl hydroperoxide reductase YP_003373276.1 956 R 553190 CDS YP_003373277.1 283782523 8710003 complement(2759..3322) 1 NC_013721.1 identified by match to protein family HMM PF00578; match to protein family HMM PF08534; match to protein family HMM TIGR03137; peroxiredoxin 3322 ahpC 8710003 ahpC Gardnerella vaginalis 409-05 peroxiredoxin YP_003373277.1 2759 R 553190 CDS YP_003373278.1 283782524 8708750 3676..4854 1 NC_013721.1 identified by match to protein family HMM PF01764; triacylglycerol lipase 4854 8708750 HMPREF0424_0004 Gardnerella vaginalis 409-05 triacylglycerol lipase YP_003373278.1 3676 D 553190 CDS YP_003373279.1 283782525 8709593 5200..7962 1 NC_013721.1 identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 7962 8709593 HMPREF0424_0005 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003373279.1 5200 D 553190 CDS YP_003373280.1 283782526 8710052 complement(8234..9112) 1 NC_013721.1 identified by match to protein family HMM PF01435; M48 family peptidase 9112 8710052 HMPREF0424_0007 Gardnerella vaginalis 409-05 M48 family peptidase YP_003373280.1 8234 R 553190 CDS YP_003373281.1 283782527 8709130 complement(9218..10696) 1 NC_013721.1 ferredoxin/ferredoxin-NADP reductase family protein 10696 8709130 HMPREF0424_0008 Gardnerella vaginalis 409-05 ferredoxin/ferredoxin-NADP reductase family protein YP_003373281.1 9218 R 553190 CDS YP_003373282.1 283782528 8709083 complement(10989..13220) 1 NC_013721.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01525; heavy metal translocating P-type ATPase 13220 8709083 HMPREF0424_0009 Gardnerella vaginalis 409-05 heavy metal translocating P-type ATPase YP_003373282.1 10989 R 553190 CDS YP_003373283.1 283782529 8709994 complement(13557..13760) 1 NC_013721.1 hypothetical protein 13760 8709994 HMPREF0424_0010 Gardnerella vaginalis 409-05 hypothetical protein YP_003373283.1 13557 R 553190 CDS YP_003373284.1 283782530 8710059 complement(14370..14849) 1 NC_013721.1 identified by match to protein family HMM PF00210; ferritin-like protein 14849 8710059 HMPREF0424_0013 Gardnerella vaginalis 409-05 ferritin-like protein YP_003373284.1 14370 R 553190 CDS YP_003373285.1 283782531 8709704 complement(14907..16202) 1 NC_013721.1 identified by match to protein family HMM PF00571; match to protein family HMM PF01595; match to protein family HMM PF03471; hypothetical protein 16202 8709704 HMPREF0424_0014 Gardnerella vaginalis 409-05 hypothetical protein YP_003373285.1 14907 R 553190 CDS YP_003373286.1 283782532 8709890 complement(16279..17049) 1 NC_013721.1 hypothetical protein 17049 8709890 HMPREF0424_0015 Gardnerella vaginalis 409-05 hypothetical protein YP_003373286.1 16279 R 553190 CDS YP_003373287.1 283782533 8709178 complement(17046..18140) 1 NC_013721.1 identified by match to protein family HMM PF03773; hypothetical protein 18140 8709178 HMPREF0424_0016 Gardnerella vaginalis 409-05 hypothetical protein YP_003373287.1 17046 R 553190 CDS YP_003373288.1 283782534 8709409 complement(18196..18855) 1 NC_013721.1 identified by match to protein family HMM PF00484; carbonate dehydratase 18855 cah 8709409 cah Gardnerella vaginalis 409-05 carbonate dehydratase YP_003373288.1 18196 R 553190 CDS YP_003373289.1 283782535 8709370 complement(19084..21840) 1 NC_013721.1 identified by match to protein family HMM PF00311; phosphoenolpyruvate carboxykinase 21840 ppc 8709370 ppc Gardnerella vaginalis 409-05 phosphoenolpyruvate carboxykinase YP_003373289.1 19084 R 553190 CDS YP_003373290.1 283782536 8709439 22047..23768 1 NC_013721.1 identified by match to protein family HMM PF06738; hypothetical protein 23768 8709439 HMPREF0424_0019 Gardnerella vaginalis 409-05 hypothetical protein YP_003373290.1 22047 D 553190 CDS YP_003373291.1 283782537 8709730 complement(23867..24958) 1 NC_013721.1 identified by match to protein family HMM PF00579; match to protein family HMM TIGR00233; tryptophan--tRNA ligase 24958 trpS 8709730 trpS Gardnerella vaginalis 409-05 tryptophan--tRNA ligase YP_003373291.1 23867 R 553190 CDS YP_003373292.1 283782538 8709590 25104..25484 1 NC_013721.1 hypothetical protein 25484 8709590 HMPREF0424_0021 Gardnerella vaginalis 409-05 hypothetical protein YP_003373292.1 25104 D 553190 CDS YP_003373293.1 283782539 8709166 complement(25602..26018) 1 NC_013721.1 hypothetical protein 26018 8709166 HMPREF0424_0022 Gardnerella vaginalis 409-05 hypothetical protein YP_003373293.1 25602 R 553190 CDS YP_003373294.1 283782540 8709619 26255..28744 1 NC_013721.1 identified by match to protein family HMM PF00343; match to protein family HMM TIGR02093; phosphorylase, glycogen/starch/alpha-glucan family 28744 glgP 8709619 glgP Gardnerella vaginalis 409-05 phosphorylase, glycogen/starch/alpha-glucan family YP_003373294.1 26255 D 553190 CDS YP_003373295.1 283782541 8708830 complement(28948..29157) 1 NC_013721.1 hypothetical protein 29157 8708830 HMPREF0424_0024 Gardnerella vaginalis 409-05 hypothetical protein YP_003373295.1 28948 R 553190 CDS YP_003373296.1 283782542 8709538 29319..30023 1 NC_013721.1 identified by match to protein family HMM PF01694; peptidase, S54 (rhomboid) family protein 30023 8709538 HMPREF0424_0025 Gardnerella vaginalis 409-05 peptidase, S54 (rhomboid) family protein YP_003373296.1 29319 D 553190 CDS YP_003373297.1 283782543 8709819 30280..31581 1 NC_013721.1 hypothetical protein 31581 8709819 HMPREF0424_0026 Gardnerella vaginalis 409-05 hypothetical protein YP_003373297.1 30280 D 553190 CDS YP_003373298.1 283782544 8709269 complement(31645..32037) 1 NC_013721.1 identified by match to protein family HMM PF06781; septation inhibitor protein 32037 8709269 HMPREF0424_0027 Gardnerella vaginalis 409-05 septation inhibitor protein YP_003373298.1 31645 R 553190 CDS YP_003373299.1 283782545 8709692 32115..32870 1 NC_013721.1 identified by match to protein family HMM PF05949; hypothetical protein 32870 8709692 HMPREF0424_0028 Gardnerella vaginalis 409-05 hypothetical protein YP_003373299.1 32115 D 553190 CDS YP_003373300.1 283782546 8709153 32916..34022 1 NC_013721.1 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 34022 8709153 HMPREF0424_0029 Gardnerella vaginalis 409-05 sortase family protein YP_003373300.1 32916 D 553190 CDS YP_003373301.1 283782547 8709487 complement(34425..36428) 1 NC_013721.1 identified by match to protein family HMM PF00069; match to protein family HMM PF03793; overlaps another CDS with the same product name; kinase domain-containing protein 36428 8709487 HMPREF0424_0030 Gardnerella vaginalis 409-05 kinase domain-containing protein YP_003373301.1 34425 R 553190 CDS YP_003373302.1 283782548 8708949 complement(36425..37387) 1 NC_013721.1 identified by match to protein family HMM PF00069; overlaps another CDS with the same product name; kinase domain-containing protein 37387 8708949 HMPREF0424_0031 Gardnerella vaginalis 409-05 kinase domain-containing protein YP_003373302.1 36425 R 553190 CDS YP_003373303.1 283782549 8709310 complement(37384..38850) 1 NC_013721.1 identified by match to protein family HMM PF00905; penicillin-binding protein 38850 8709310 HMPREF0424_0032 Gardnerella vaginalis 409-05 penicillin-binding protein YP_003373303.1 37384 R 553190 CDS YP_003373304.1 283782550 8708747 complement(38843..40324) 1 NC_013721.1 identified by match to protein family HMM PF01098; FtsW/RodA/SpoVE family cell cycle protein 40324 8708747 HMPREF0424_0033 Gardnerella vaginalis 409-05 FtsW/RodA/SpoVE family cell cycle protein YP_003373304.1 38843 R 553190 CDS YP_003373305.1 283782551 8709651 complement(40321..41985) 1 NC_013721.1 identified by match to protein family HMM PF00481; protein phosphatase 2C 41985 8709651 HMPREF0424_0034 Gardnerella vaginalis 409-05 protein phosphatase 2C YP_003373305.1 40321 R 553190 CDS YP_003373306.1 283782552 8708951 complement(41989..42525) 1 NC_013721.1 identified by match to protein family HMM PF00498; FHA domain-containing protein 42525 8708951 HMPREF0424_0035 Gardnerella vaginalis 409-05 FHA domain-containing protein YP_003373306.1 41989 R 553190 CDS YP_003373307.1 283782553 8709127 complement(42559..43260) 1 NC_013721.1 identified by match to protein family HMM PF00498; FHA domain-containing protein 43260 8709127 HMPREF0424_0036 Gardnerella vaginalis 409-05 FHA domain-containing protein YP_003373307.1 42559 R 553190 CDS YP_003373308.1 283782554 8709990 43416..44153 1 NC_013721.1 identified by match to protein family HMM PF01569; PAP2 family protein 44153 8709990 HMPREF0424_0037 Gardnerella vaginalis 409-05 PAP2 family protein YP_003373308.1 43416 D 553190 CDS YP_003373309.1 283782555 8709265 44177..44587 1 NC_013721.1 identified by match to protein family HMM PF01741; match to protein family HMM TIGR00220; large conductance mechanosensitive channel protein 44587 mscL 8709265 mscL Gardnerella vaginalis 409-05 large conductance mechanosensitive channel protein YP_003373309.1 44177 D 553190 CDS YP_003373310.1 283782556 8709464 complement(44673..45338) 1 NC_013721.1 hypothetical protein 45338 8709464 HMPREF0424_0039 Gardnerella vaginalis 409-05 hypothetical protein YP_003373310.1 44673 R 553190 CDS YP_003373311.1 283782557 8708757 complement(45488..48118) 1 NC_013721.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; match to protein family HMM TIGR01063; DNA gyrase subunit A 48118 gyrA 8708757 gyrA Gardnerella vaginalis 409-05 DNA gyrase subunit A YP_003373311.1 45488 R 553190 CDS YP_003373312.1 283782558 8709595 complement(48188..50263) 1 NC_013721.1 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; match to protein family HMM TIGR01059; DNA gyrase subunit B 50263 gyrB 8709595 gyrB Gardnerella vaginalis 409-05 DNA gyrase subunit B YP_003373312.1 48188 R 553190 CDS YP_003373313.1 283782559 8709833 complement(50444..50911) 1 NC_013721.1 hypothetical protein 50911 8709833 HMPREF0424_0042 Gardnerella vaginalis 409-05 hypothetical protein YP_003373313.1 50444 R 553190 CDS YP_003373314.1 283782560 8709255 complement(50911..52212) 1 NC_013721.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00611; DNA replication and repair protein RecF 52212 recF 8709255 recF Gardnerella vaginalis 409-05 DNA replication and repair protein RecF YP_003373314.1 50911 R 553190 CDS YP_003373315.1 283782561 8709945 complement(52311..53435) 1 NC_013721.1 identified by match to protein family HMM PF00712; match to protein family HMM PF02767; match to protein family HMM PF02768; match to protein family HMM TIGR00663; DNA polymerase III subunit beta 53435 dnaN 8709945 dnaN Gardnerella vaginalis 409-05 DNA polymerase III subunit beta YP_003373315.1 52311 R 553190 CDS YP_003373316.1 283782562 8709161 complement(53866..55485) 1 NC_013721.1 identified by match to protein family HMM PF00308; match to protein family HMM PF08299; match to protein family HMM TIGR00362; chromosomal replication initiator protein DnaA 55485 dnaA 8709161 dnaA Gardnerella vaginalis 409-05 chromosomal replication initiator protein DnaA YP_003373316.1 53866 R 553190 CDS YP_003373317.1 283782563 8709829 55874..56008 1 NC_013721.1 identified by match to protein family HMM PF00468; match to protein family HMM TIGR01030; 50S ribosomal protein L34 56008 rpmH 8709829 rpmH Gardnerella vaginalis 409-05 50S ribosomal protein L34 YP_003373317.1 55874 D 553190 CDS YP_003373318.1 283782564 8708980 56120..56527 1 NC_013721.1 identified by match to protein family HMM PF00825; match to protein family HMM TIGR00188; ribonuclease P protein component 56527 8708980 HMPREF0424_0047 Gardnerella vaginalis 409-05 ribonuclease P protein component YP_003373318.1 56120 D 553190 CDS YP_003373319.1 283782565 8709407 56708..56854 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 56854 8709407 HMPREF0424_0048 Gardnerella vaginalis 409-05 hypothetical protein YP_003373319.1 56708 D 553190 CDS YP_003373320.1 283782566 8708852 56886..57899 1 NC_013721.1 identified by match to protein family HMM PF02096; match to protein family HMM TIGR03592; YidC/Oxa1 family membrane protein insertase 57899 yidC 8708852 yidC Gardnerella vaginalis 409-05 YidC/Oxa1 family membrane protein insertase YP_003373320.1 56886 D 553190 CDS YP_003373321.1 283782567 8709290 58036..58590 1 NC_013721.1 identified by match to protein family HMM PF01424; R3H domain-containing protein 58590 8709290 HMPREF0424_0050 Gardnerella vaginalis 409-05 R3H domain-containing protein YP_003373321.1 58036 D 553190 CDS YP_003373322.1 283782568 8710020 58669..59436 1 NC_013721.1 identified by match to protein family HMM PF02527; match to protein family HMM TIGR00138; 16S rRNA methyltransferase GidB 59436 gidB 8710020 gidB Gardnerella vaginalis 409-05 16S rRNA methyltransferase GidB YP_003373322.1 58669 D 553190 CDS YP_003373323.1 283782569 8709144 60342..61313 1 NC_013721.1 identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein Soj family protein 61313 8709144 HMPREF0424_0052 Gardnerella vaginalis 409-05 sporulation initiation inhibitor protein Soj family protein YP_003373323.1 60342 D 553190 CDS YP_003373324.1 283782570 8709728 61313..62665 1 NC_013721.1 identified by match to protein family HMM PF02195; match to protein family HMM TIGR00180; ParB-like protein 62665 8709728 HMPREF0424_0053 Gardnerella vaginalis 409-05 ParB-like protein YP_003373324.1 61313 D 553190 CDS YP_003373325.1 283782571 8709517 complement(62789..63730) 1 NC_013721.1 identified by match to protein family HMM PF00070; match to protein family HMM PF03486; match to protein family HMM PF07992; match to protein family HMM TIGR01292; thioredoxin-disulfide reductase 63730 trxB 8709517 trxB Gardnerella vaginalis 409-05 thioredoxin-disulfide reductase YP_003373325.1 62789 R 553190 CDS YP_003373326.1 283782572 8709004 complement(63765..65984) 1 NC_013721.1 hypothetical protein 65984 8709004 HMPREF0424_0055 Gardnerella vaginalis 409-05 hypothetical protein YP_003373326.1 63765 R 553190 CDS YP_003373327.1 283782573 8709909 complement(66150..67946) 1 NC_013721.1 identified by match to protein family HMM PF03023; integral membrane protein MviN 67946 8709909 HMPREF0424_0056 Gardnerella vaginalis 409-05 integral membrane protein MviN YP_003373327.1 66150 R 553190 CDS YP_003373328.1 283782574 8709125 complement(70316..71092) 1 NC_013721.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 71092 8709125 HMPREF0424_0059 Gardnerella vaginalis 409-05 NUDIX family hydrolase YP_003373328.1 70316 R 553190 CDS YP_003373329.1 283782575 8708758 71180..72607 1 NC_013721.1 identified by match to protein family HMM PF01743; match to protein family HMM PF01966; match to protein family HMM TIGR00277; match to protein family HMM TIGR02692; tRNA adenylyltransferase 72607 8708758 HMPREF0424_0060 Gardnerella vaginalis 409-05 tRNA adenylyltransferase YP_003373329.1 71180 D 553190 CDS YP_003373330.1 283782576 8709635 complement(72664..73290) 1 NC_013721.1 hypothetical protein 73290 8709635 HMPREF0424_0061 Gardnerella vaginalis 409-05 hypothetical protein YP_003373330.1 72664 R 553190 CDS YP_003373331.1 283782577 8709666 complement(73420..74328) 1 NC_013721.1 identified by match to protein family HMM PF00398; match to protein family HMM TIGR00755; dimethyladenosine transferase 74328 ksgA 8709666 ksgA Gardnerella vaginalis 409-05 dimethyladenosine transferase YP_003373331.1 73420 R 553190 CDS YP_003373332.1 283782578 8708882 complement(74372..75754) 1 NC_013721.1 identified by match to protein family HMM PF03990; match to protein family HMM PF07501; G5 domain-containing protein 75754 8708882 HMPREF0424_0063 Gardnerella vaginalis 409-05 G5 domain-containing protein YP_003373332.1 74372 R 553190 CDS YP_003373333.1 283782579 8710078 76444..78285 1 NC_013721.1 identified by match to protein family HMM PF00069; match to protein family HMM PF01163; kinase domain-containing protein 78285 8710078 HMPREF0424_0065 Gardnerella vaginalis 409-05 kinase domain-containing protein YP_003373333.1 76444 D 553190 CDS YP_003373334.1 283782580 8709038 78418..79389 1 NC_013721.1 hypothetical protein 79389 8709038 HMPREF0424_0066 Gardnerella vaginalis 409-05 hypothetical protein YP_003373334.1 78418 D 553190 CDS YP_003373335.1 283782581 8709182 complement(79485..80444) 1 NC_013721.1 hypothetical protein 80444 8709182 HMPREF0424_0067 Gardnerella vaginalis 409-05 hypothetical protein YP_003373335.1 79485 R 553190 CDS YP_003373336.1 283782582 8709726 80685..81812 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08402; ABC transporter ATP-binding protein 81812 8709726 HMPREF0424_0068 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373336.1 80685 D 553190 CDS YP_003373337.1 283782583 8709443 82062..83477 1 NC_013721.1 hypothetical protein 83477 8709443 HMPREF0424_0069 Gardnerella vaginalis 409-05 hypothetical protein YP_003373337.1 82062 D 553190 CDS YP_003373338.1 283782584 8710069 complement(83773..84033) 1 NC_013721.1 identified by match to protein family HMM PF00462; glutaredoxin 84033 8710069 HMPREF0424_0071 Gardnerella vaginalis 409-05 glutaredoxin YP_003373338.1 83773 R 553190 CDS YP_003373339.1 283782585 8709073 84222..85403 1 NC_013721.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM TIGR00064; signal recognition particle-docking protein FtsY 85403 ftsY 8709073 ftsY Gardnerella vaginalis 409-05 signal recognition particle-docking protein FtsY YP_003373339.1 84222 D 553190 CDS YP_003373340.1 283782586 8709175 85566..87344 1 NC_013721.1 identified by match to protein family HMM PF00909; ammonium transporter family protein 87344 8709175 HMPREF0424_0073 Gardnerella vaginalis 409-05 ammonium transporter family protein YP_003373340.1 85566 D 553190 CDS YP_003373341.1 283782587 8708960 87765..89126 1 NC_013721.1 identified by match to protein family HMM PF01554; match to protein family HMM TIGR00797; MATE efflux family protein 89126 8708960 HMPREF0424_0074 Gardnerella vaginalis 409-05 MATE efflux family protein YP_003373341.1 87765 D 553190 CDS YP_003373342.1 283782588 8709722 89207..90652 1 NC_013721.1 identified by match to protein family HMM PF00772; match to protein family HMM PF03796; match to protein family HMM TIGR00665; replicative DNA helicase 90652 dnaB 8709722 dnaB Gardnerella vaginalis 409-05 replicative DNA helicase YP_003373342.1 89207 D 553190 CDS YP_003373343.1 283782589 8709204 90668..92086 1 NC_013721.1 identified by match to protein family HMM PF08245; match to protein family HMM PF08353; Mur ligase middle domain-containing protein 92086 8709204 HMPREF0424_0076 Gardnerella vaginalis 409-05 Mur ligase middle domain-containing protein YP_003373343.1 90668 D 553190 CDS YP_003373344.1 283782590 8709900 92092..92886 1 NC_013721.1 identified by match to protein family HMM PF07685; CobB/CobQ-like protein 92886 8709900 HMPREF0424_0077 Gardnerella vaginalis 409-05 CobB/CobQ-like protein YP_003373344.1 92092 D 553190 CDS YP_003373345.1 283782591 8709128 93164..93583 1 NC_013721.1 identified by match to protein family HMM PF03681; toxin-antitoxin system, antitoxin component, HicB family 93583 8709128 HMPREF0424_0078 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component, HicB family YP_003373345.1 93164 D 553190 CDS YP_003373346.1 283782592 8709094 complement(93729..94367) 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01091; uracil phosphoribosyltransferase 94367 upp 8709094 upp Gardnerella vaginalis 409-05 uracil phosphoribosyltransferase YP_003373346.1 93729 R 553190 CDS YP_003373347.1 283782593 8709949 complement(94686..95339) 1 NC_013721.1 hypothetical protein 95339 8709949 HMPREF0424_0080 Gardnerella vaginalis 409-05 hypothetical protein YP_003373347.1 94686 R 553190 CDS YP_003373348.1 283782594 8709563 complement(95386..96582) 1 NC_013721.1 identified by match to protein family HMM PF00293; match to protein family HMM PF00300; NUDIX family hydrolase 96582 8709563 HMPREF0424_0081 Gardnerella vaginalis 409-05 NUDIX family hydrolase YP_003373348.1 95386 R 553190 CDS YP_003373349.1 283782595 8709820 97158..98432 1 NC_013721.1 identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA (cytosine-5-)-methyltransferase 98432 dcm_1 8709820 dcm_1 Gardnerella vaginalis 409-05 DNA (cytosine-5-)-methyltransferase YP_003373349.1 97158 D 553190 CDS YP_003373350.1 283782596 8709120 98542..99990 1 NC_013721.1 identified by match to protein family HMM PF02976; DNA mismatch repair protein MutH 99990 mutH 8709120 mutH Gardnerella vaginalis 409-05 DNA mismatch repair protein MutH YP_003373350.1 98542 D 553190 CDS YP_003373351.1 283782597 8709254 complement(100273..102510) 1 NC_013721.1 identified by match to protein family HMM PF02503; match to protein family HMM TIGR03705; polyphosphate kinase 1 102510 ppk 8709254 ppk Gardnerella vaginalis 409-05 polyphosphate kinase 1 YP_003373351.1 100273 R 553190 CDS YP_003373352.1 283782598 8709988 complement(102494..102634) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 102634 8709988 HMPREF0424_0085 Gardnerella vaginalis 409-05 hypothetical protein YP_003373352.1 102494 R 553190 CDS YP_003373353.1 283782599 8709414 103173..103904 1 NC_013721.1 identified by match to protein family HMM PF00230; glycerol facilitator-aquaporin 103904 gla 8709414 gla Gardnerella vaginalis 409-05 glycerol facilitator-aquaporin YP_003373353.1 103173 D 553190 CDS YP_003373354.1 283782600 8708873 104005..105129 1 NC_013721.1 identified by match to protein family HMM PF00749; tRNA synthetase class I (E and Q), catalytic domain-containing protein 105129 8708873 HMPREF0424_0087 Gardnerella vaginalis 409-05 tRNA synthetase class I (E and Q), catalytic domain-containing protein YP_003373354.1 104005 D 553190 CDS YP_003373355.1 283782601 8708874 105164..105964 1 NC_013721.1 identified by match to protein family HMM PF01168; match to protein family HMM TIGR00044; pyridoxal phosphate enzyme, YggS family 105964 8708874 HMPREF0424_0088 Gardnerella vaginalis 409-05 pyridoxal phosphate enzyme, YggS family YP_003373355.1 105164 D 553190 CDS YP_003373356.1 283782602 8709559 105986..106801 1 NC_013721.1 identified by match to protein family HMM PF01557; FAH family protein 106801 8709559 HMPREF0424_0089 Gardnerella vaginalis 409-05 FAH family protein YP_003373356.1 105986 D 553190 CDS YP_003373357.1 283782603 8709022 complement(106875..108143) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 108143 8709022 HMPREF0424_0090 Gardnerella vaginalis 409-05 hypothetical protein YP_003373357.1 106875 R 553190 CDS YP_003373358.1 283782604 8709724 complement(108151..108858) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 108858 8709724 HMPREF0424_0091 Gardnerella vaginalis 409-05 hypothetical protein YP_003373358.1 108151 R 553190 CDS YP_003373359.1 283782605 8709077 109250..111844 1 NC_013721.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; match to protein family HMM TIGR03346; ATP-dependent chaperone protein ClpB 111844 clpB 8709077 clpB Gardnerella vaginalis 409-05 ATP-dependent chaperone protein ClpB YP_003373359.1 109250 D 553190 CDS YP_003373360.1 283782606 8709760 112188..112514 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 112514 8709760 HMPREF0424_0093 Gardnerella vaginalis 409-05 hypothetical protein YP_003373360.1 112188 D 553190 CDS YP_003373361.1 283782607 8709700 112562..113329 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 113329 8709700 HMPREF0424_0094 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373361.1 112562 D 553190 CDS YP_003373362.1 283782608 8709308 113401..114957 1 NC_013721.1 overlaps another CDS with the same product name; hypothetical protein 114957 8709308 HMPREF0424_0095 Gardnerella vaginalis 409-05 hypothetical protein YP_003373362.1 113401 D 553190 CDS YP_003373363.1 283782609 8710024 114947..115678 1 NC_013721.1 overlaps another CDS with the same product name; hypothetical protein 115678 8710024 HMPREF0424_0096 Gardnerella vaginalis 409-05 hypothetical protein YP_003373363.1 114947 D 553190 CDS YP_003373364.1 283782610 8709454 115733..117073 1 NC_013721.1 identified by match to protein family HMM PF02646; RmuC domain-containing protein 117073 rmuC 8709454 rmuC Gardnerella vaginalis 409-05 RmuC domain-containing protein YP_003373364.1 115733 D 553190 CDS YP_003373365.1 283782611 8709527 117131..117898 1 NC_013721.1 hypothetical protein 117898 8709527 HMPREF0424_0098 Gardnerella vaginalis 409-05 hypothetical protein YP_003373365.1 117131 D 553190 CDS YP_003373366.1 283782612 8708821 117956..118762 1 NC_013721.1 identified by match to protein family HMM PF00588; TrmH family RNA methyltransferase 118762 8708821 HMPREF0424_0099 Gardnerella vaginalis 409-05 TrmH family RNA methyltransferase YP_003373366.1 117956 D 553190 CDS YP_003373367.1 283782613 8709686 118908..119900 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 119900 8709686 HMPREF0424_0100 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373367.1 118908 D 553190 CDS YP_003373368.1 283782614 8709013 119897..120871 1 NC_013721.1 hypothetical protein 120871 8709013 HMPREF0424_0101 Gardnerella vaginalis 409-05 hypothetical protein YP_003373368.1 119897 D 553190 CDS YP_003373369.1 283782615 8709191 complement(120940..121071) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 121071 8709191 HMPREF0424_0102 Gardnerella vaginalis 409-05 hypothetical protein YP_003373369.1 120940 R 553190 CDS YP_003373370.1 283782616 8709832 complement(121784..123334) 1 NC_013721.1 identified by match to protein family HMM PF01289; thiol-activated cytolysin 123334 8709832 HMPREF0424_0103 Gardnerella vaginalis 409-05 thiol-activated cytolysin YP_003373370.1 121784 R 553190 CDS YP_003373371.1 283782617 8709969 123833..124129 1 NC_013721.1 identified by match to protein family HMM PF02686; match to protein family HMM TIGR00135; glutamyl-tRNA(Gln) amidotransferase subunit C 124129 gatC 8709969 gatC Gardnerella vaginalis 409-05 glutamyl-tRNA(Gln) amidotransferase subunit C YP_003373371.1 123833 D 553190 CDS YP_003373372.1 283782618 8709278 124132..125673 1 NC_013721.1 identified by match to protein family HMM PF01425; match to protein family HMM TIGR00132; aspartyl/glutamyl-tRNA amidotransferase subunit A 125673 gatA 8709278 gatA Gardnerella vaginalis 409-05 aspartyl/glutamyl-tRNA amidotransferase subunit A YP_003373372.1 124132 D 553190 CDS YP_003373373.1 283782619 8709488 125706..127205 1 NC_013721.1 identified by match to protein family HMM PF01162; match to protein family HMM PF02637; match to protein family HMM PF02934; match to protein family HMM TIGR00133; GatB/GatE catalytic domain-containing protein 127205 gatB 8709488 gatB Gardnerella vaginalis 409-05 GatB/GatE catalytic domain-containing protein YP_003373373.1 125706 D 553190 CDS YP_003373374.1 283782620 8708900 127462..128370 1 NC_013721.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 128370 8708900 HMPREF0424_0107 Gardnerella vaginalis 409-05 GNAT family acetyltransferase YP_003373374.1 127462 D 553190 CDS YP_003373375.1 283782621 8709897 128370..128684 1 NC_013721.1 hypothetical protein 128684 8709897 HMPREF0424_0108 Gardnerella vaginalis 409-05 hypothetical protein YP_003373375.1 128370 D 553190 CDS YP_003373376.1 283782622 8709306 128776..130395 1 NC_013721.1 identified by match to protein family HMM PF01266; FAD dependent oxidoreductase 130395 8709306 HMPREF0424_0109 Gardnerella vaginalis 409-05 FAD dependent oxidoreductase YP_003373376.1 128776 D 553190 CDS YP_003373377.1 283782623 8709503 130733..132703 1 NC_013721.1 identified by match to protein family HMM PF00006; match to protein family HMM PF07497; match to protein family HMM PF07498; match to protein family HMM TIGR00767; transcription termination factor Rho 132703 rho 8709503 rho Gardnerella vaginalis 409-05 transcription termination factor Rho YP_003373377.1 130733 D 553190 CDS YP_003373378.1 283782624 8708756 complement(132800..134005) 1 NC_013721.1 identified by match to protein family HMM PF00155; aspartate transaminase 134005 8708756 HMPREF0424_0111 Gardnerella vaginalis 409-05 aspartate transaminase YP_003373378.1 132800 R 553190 CDS YP_003373379.1 283782625 8709893 134288..134749 1 NC_013721.1 identified by match to protein family HMM PF01037; AsnC family transcriptional regulator 134749 8709893 HMPREF0424_0112 Gardnerella vaginalis 409-05 AsnC family transcriptional regulator YP_003373379.1 134288 D 553190 CDS YP_003373380.1 283782626 8709479 134755..135096 1 NC_013721.1 identified by match to protein family HMM PF01817; match to protein family HMM TIGR01795; chorismate mutase 135096 8709479 HMPREF0424_0113 Gardnerella vaginalis 409-05 chorismate mutase YP_003373380.1 134755 D 553190 CDS YP_003373381.1 283782627 8708800 135243..136298 1 NC_013721.1 identified by match to protein family HMM PF01116; match to protein family HMM TIGR00167; match to protein family HMM TIGR01520; fructose-bisphosphate aldolase 136298 fbaA 8708800 fbaA Gardnerella vaginalis 409-05 fructose-bisphosphate aldolase YP_003373381.1 135243 D 553190 CDS YP_003373382.1 283782628 8709387 136414..137715 1 NC_013721.1 identified by match to protein family HMM PF00709; match to protein family HMM TIGR00184; adenylosuccinate synthase 137715 purA 8709387 purA Gardnerella vaginalis 409-05 adenylosuccinate synthase YP_003373382.1 136414 D 553190 CDS YP_003373383.1 283782629 8708913 137894..138313 1 NC_013721.1 identified by match to protein family HMM PF02537; CrcB-like protein 138313 8708913 HMPREF0424_0116 Gardnerella vaginalis 409-05 CrcB-like protein YP_003373383.1 137894 D 553190 CDS YP_003373384.1 283782630 8709605 138313..138723 1 NC_013721.1 identified by match to protein family HMM PF02537; CrcB protein 138723 8709605 HMPREF0424_0117 Gardnerella vaginalis 409-05 CrcB protein YP_003373384.1 138313 D 553190 CDS YP_003373385.1 283782631 8709020 138763..140130 1 NC_013721.1 identified by match to protein family HMM PF00654; chloride transporter 140130 8709020 HMPREF0424_0118 Gardnerella vaginalis 409-05 chloride transporter YP_003373385.1 138763 D 553190 CDS YP_003373386.1 283782632 8709743 140254..141429 1 NC_013721.1 hypothetical protein 141429 8709743 HMPREF0424_0119 Gardnerella vaginalis 409-05 hypothetical protein YP_003373386.1 140254 D 553190 CDS YP_003373387.1 283782633 8709219 141416..142492 1 NC_013721.1 identified by match to protein family HMM PF00437; type II/IV secretion system protein 142492 8709219 HMPREF0424_0120 Gardnerella vaginalis 409-05 type II/IV secretion system protein YP_003373387.1 141416 D 553190 CDS YP_003373388.1 283782634 8709927 142522..143097 1 NC_013721.1 hypothetical protein 143097 8709927 HMPREF0424_0121 Gardnerella vaginalis 409-05 hypothetical protein YP_003373388.1 142522 D 553190 CDS YP_003373389.1 283782635 8709012 143101..143748 1 NC_013721.1 hypothetical protein 143748 8709012 HMPREF0424_0122 Gardnerella vaginalis 409-05 hypothetical protein YP_003373389.1 143101 D 553190 CDS YP_003373390.1 283782636 8709351 143884..144162 1 NC_013721.1 hypothetical protein 144162 8709351 HMPREF0424_0123 Gardnerella vaginalis 409-05 hypothetical protein YP_003373390.1 143884 D 553190 CDS YP_003373391.1 283782637 8708925 144345..144572 1 NC_013721.1 hypothetical protein 144572 8708925 HMPREF0424_0124 Gardnerella vaginalis 409-05 hypothetical protein YP_003373391.1 144345 D 553190 CDS YP_003373392.1 283782638 8708775 144569..144973 1 NC_013721.1 identified by match to protein family HMM TIGR03816; TadE-like protein 144973 8708775 HMPREF0424_0125 Gardnerella vaginalis 409-05 TadE-like protein YP_003373392.1 144569 D 553190 CDS YP_003373393.1 283782639 8709637 145079..147484 1 NC_013721.1 identified by match to protein family HMM PF00004; match to protein family HMM TIGR02397; DNA polymerase III, subunit gamma and tau 147484 dnaX 8709637 dnaX Gardnerella vaginalis 409-05 DNA polymerase III, subunit gamma and tau YP_003373393.1 145079 D 553190 CDS YP_003373394.1 283782640 8709353 147491..148099 1 NC_013721.1 identified by match to protein family HMM PF01751; match to protein family HMM PF02132; match to protein family HMM TIGR00615; recombination protein RecR 148099 recR 8709353 recR Gardnerella vaginalis 409-05 recombination protein RecR YP_003373394.1 147491 D 553190 CDS YP_003373395.1 283782641 8709131 149711..150778 1 NC_013721.1 identified by match to protein family HMM PF01118; match to protein family HMM PF02774; match to protein family HMM TIGR01296; aspartate-semialdehyde dehydrogenase 150778 asd 8709131 asd Gardnerella vaginalis 409-05 aspartate-semialdehyde dehydrogenase YP_003373395.1 149711 D 553190 CDS YP_003373396.1 283782642 8708901 150831..151451 1 NC_013721.1 hypothetical protein 151451 8708901 HMPREF0424_0131 Gardnerella vaginalis 409-05 hypothetical protein YP_003373396.1 150831 D 553190 CDS YP_003373397.1 283782643 8708892 151561..152262 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 152262 8708892 HMPREF0424_0132 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373397.1 151561 D 553190 CDS YP_003373398.1 283782644 8709090 152276..155029 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 155029 8709090 HMPREF0424_0133 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003373398.1 152276 D 553190 CDS YP_003373399.1 283782645 8709865 155117..156700 1 NC_013721.1 identified by match to protein family HMM PF00324; amino acid permease 156700 8709865 HMPREF0424_0134 Gardnerella vaginalis 409-05 amino acid permease YP_003373399.1 155117 D 553190 CDS YP_003373400.1 283782646 8709801 156737..157444 1 NC_013721.1 identified by match to protein family HMM PF01939; hypothetical protein 157444 8709801 HMPREF0424_0135 Gardnerella vaginalis 409-05 hypothetical protein YP_003373400.1 156737 D 553190 CDS YP_003373401.1 283782647 8708955 complement(157529..158518) 1 NC_013721.1 identified by match to protein family HMM PF00254; FKBP-type peptidyl-prolyl cis-trans isomerase 158518 8708955 HMPREF0424_0136 Gardnerella vaginalis 409-05 FKBP-type peptidyl-prolyl cis-trans isomerase YP_003373401.1 157529 R 553190 CDS YP_003373402.1 283782648 8709425 158598..160394 1 NC_013721.1 hypothetical protein 160394 8709425 HMPREF0424_0137 Gardnerella vaginalis 409-05 hypothetical protein YP_003373402.1 158598 D 553190 CDS YP_003373403.1 283782649 8708906 160396..161451 1 NC_013721.1 hypothetical protein 161451 8708906 HMPREF0424_0138 Gardnerella vaginalis 409-05 hypothetical protein YP_003373403.1 160396 D 553190 CDS YP_003373404.1 283782650 8708940 161495..162517 1 NC_013721.1 hypothetical protein 162517 8708940 HMPREF0424_0139 Gardnerella vaginalis 409-05 hypothetical protein YP_003373404.1 161495 D 553190 CDS YP_003373405.1 283782651 8710042 162847..163878 1 NC_013721.1 identified by match to protein family HMM PF04204; match to protein family HMM TIGR01001; homoserine O-succinyltransferase 163878 metA 8710042 metA Gardnerella vaginalis 409-05 homoserine O-succinyltransferase YP_003373405.1 162847 D 553190 CDS YP_003373406.1 283782652 8708845 164081..164935 1 NC_013721.1 identified by match to protein family HMM PF00119; match to protein family HMM TIGR01131; ATP synthase F0 subunit A 164935 atpB 8708845 atpB Gardnerella vaginalis 409-05 ATP synthase F0 subunit A YP_003373406.1 164081 D 553190 CDS YP_003373407.1 283782653 8709186 165036..165269 1 NC_013721.1 identified by match to protein family HMM PF00137; F0F1 ATP synthase subunit C 165269 8709186 HMPREF0424_0143 Gardnerella vaginalis 409-05 F0F1 ATP synthase subunit C YP_003373407.1 165036 D 553190 CDS YP_003373408.1 283782654 8709711 165330..165872 1 NC_013721.1 identified by match to protein family HMM PF00430; match to protein family HMM TIGR01144; ATP synthase F0 subunit B 165872 atpF 8709711 atpF Gardnerella vaginalis 409-05 ATP synthase F0 subunit B YP_003373408.1 165330 D 553190 CDS YP_003373409.1 283782655 8709330 165972..166553 1 NC_013721.1 identified by match to protein family HMM PF00213; match to protein family HMM TIGR01145; ATP synthase F1 subunit delta 166553 atpH 8709330 atpH Gardnerella vaginalis 409-05 ATP synthase F1 subunit delta YP_003373409.1 165972 D 553190 CDS YP_003373410.1 283782656 8709145 166570..168231 1 NC_013721.1 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR00962; ATP synthase F1 subunit alpha 168231 atpA 8709145 atpA Gardnerella vaginalis 409-05 ATP synthase F1 subunit alpha YP_003373410.1 166570 D 553190 CDS YP_003373411.1 283782657 8709845 168235..169239 1 NC_013721.1 identified by match to protein family HMM PF00231; match to protein family HMM TIGR01146; ATP synthase F1 subunit gamma 169239 atpG 8709845 atpG Gardnerella vaginalis 409-05 ATP synthase F1 subunit gamma YP_003373411.1 168235 D 553190 CDS YP_003373412.1 283782658 8709612 169246..170733 1 NC_013721.1 identified by match to protein family HMM PF00006; match to protein family HMM PF00306; match to protein family HMM PF02874; match to protein family HMM TIGR01039; ATP synthase F1 subunit beta 170733 atpD 8709612 atpD Gardnerella vaginalis 409-05 ATP synthase F1 subunit beta YP_003373412.1 169246 D 553190 CDS YP_003373413.1 283782659 8708749 170817..171050 1 NC_013721.1 ATP synthase subunit delta/epsilon 171050 8708749 HMPREF0424_0149 Gardnerella vaginalis 409-05 ATP synthase subunit delta/epsilon YP_003373413.1 170817 D 553190 CDS YP_003373414.1 283782660 8709079 171790..171975 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 171975 8709079 HMPREF0424_0150 Gardnerella vaginalis 409-05 hypothetical protein YP_003373414.1 171790 D 553190 CDS YP_003373415.1 283782661 8709148 171994..172713 1 NC_013721.1 identified by match to protein family HMM PF02661; toxin-antitoxin system, toxin component, Fic family 172713 8709148 HMPREF0424_0151 Gardnerella vaginalis 409-05 toxin-antitoxin system, toxin component, Fic family YP_003373415.1 171994 D 553190 CDS YP_003373416.1 283782662 8709792 173008..174258 1 NC_013721.1 identified by match to protein family HMM PF02661; Fic family protein 174258 8709792 HMPREF0424_0152 Gardnerella vaginalis 409-05 Fic family protein YP_003373416.1 173008 D 553190 CDS YP_003373417.1 283782663 8708928 174289..175338 1 NC_013721.1 thiamine biosynthesis lipoprotein, ApbE family 175338 8708928 HMPREF0424_0153 Gardnerella vaginalis 409-05 thiamine biosynthesis lipoprotein, ApbE family YP_003373417.1 174289 D 553190 CDS YP_003373418.1 283782664 8709468 complement(175667..177004) 1 NC_013721.1 identified by match to protein family HMM PF00512; match to protein family HMM PF02518; sensor histidine kinase/response regulator 177004 8709468 HMPREF0424_0154 Gardnerella vaginalis 409-05 sensor histidine kinase/response regulator YP_003373418.1 175667 R 553190 CDS YP_003373419.1 283782665 8709313 complement(177083..177784) 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 177784 8709313 HMPREF0424_0155 Gardnerella vaginalis 409-05 response regulator receiver domain-containing protein YP_003373419.1 177083 R 553190 CDS YP_003373420.1 283782666 8709947 177924..178688 1 NC_013721.1 identified by match to protein family HMM PF00005; bacitracin transport ATP-binding protein BcrA 178688 bcrA 8709947 bcrA Gardnerella vaginalis 409-05 bacitracin transport ATP-binding protein BcrA YP_003373420.1 177924 D 553190 CDS YP_003373421.1 283782667 8709107 178685..179410 1 NC_013721.1 hypothetical protein 179410 8709107 HMPREF0424_0157 Gardnerella vaginalis 409-05 hypothetical protein YP_003373421.1 178685 D 553190 CDS YP_003373422.1 283782668 8709821 179424..180188 1 NC_013721.1 hypothetical protein 180188 8709821 HMPREF0424_0158 Gardnerella vaginalis 409-05 hypothetical protein YP_003373422.1 179424 D 553190 CDS YP_003373423.1 283782669 8709828 180292..180897 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 180897 8709828 HMPREF0424_0159 Gardnerella vaginalis 409-05 hypothetical protein YP_003373423.1 180292 D 553190 CDS YP_003373424.1 283782670 8708971 181139..182857 1 NC_013721.1 identified by match to protein family HMM PF03239; iron permease FTR1 family protein 182857 8708971 HMPREF0424_0160 Gardnerella vaginalis 409-05 iron permease FTR1 family protein YP_003373424.1 181139 D 553190 CDS YP_003373425.1 283782671 8709634 182953..183597 1 NC_013721.1 pathogen-specific surface antigen family protein 183597 8709634 HMPREF0424_0161 Gardnerella vaginalis 409-05 pathogen-specific surface antigen family protein YP_003373425.1 182953 D 553190 CDS YP_003373426.1 283782672 8709710 183670..184941 1 NC_013721.1 hypothetical protein 184941 8709710 HMPREF0424_0162 Gardnerella vaginalis 409-05 hypothetical protein YP_003373426.1 183670 D 553190 CDS YP_003373427.1 283782673 8708815 184954..186288 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 186288 8708815 HMPREF0424_0163 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003373427.1 184954 D 553190 CDS YP_003373428.1 283782674 8709528 186278..187645 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 187645 8709528 HMPREF0424_0164 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003373428.1 186278 D 553190 CDS YP_003373429.1 283782675 8708891 187686..188531 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 188531 8708891 HMPREF0424_0165 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373429.1 187686 D 553190 CDS YP_003373430.1 283782676 8709417 188577..189176 1 NC_013721.1 hypothetical protein 189176 8709417 HMPREF0424_0166 Gardnerella vaginalis 409-05 hypothetical protein YP_003373430.1 188577 D 553190 CDS YP_003373431.1 283782677 8710015 complement(189189..189425) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 189425 8710015 HMPREF0424_0167 Gardnerella vaginalis 409-05 hypothetical protein YP_003373431.1 189189 R 553190 CDS YP_003373432.1 283782678 8709536 complement(189608..190111) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 190111 8709536 HMPREF0424_0168 Gardnerella vaginalis 409-05 hypothetical protein YP_003373432.1 189608 R 553190 CDS YP_003373433.1 283782679 8709866 190305..191045 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 191045 8709866 HMPREF0424_0169 Gardnerella vaginalis 409-05 LuxR family transcriptional regulator YP_003373433.1 190305 D 553190 CDS YP_003373434.1 283782680 8709158 191039..192256 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 192256 8709158 HMPREF0424_0170 Gardnerella vaginalis 409-05 hypothetical protein YP_003373434.1 191039 D 553190 CDS YP_003373435.1 283782681 8709647 complement(192295..192555) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 192555 8709647 HMPREF0424_0171 Gardnerella vaginalis 409-05 hypothetical protein YP_003373435.1 192295 R 553190 CDS YP_003373436.1 283782682 8709074 complement(192745..192957) 1 NC_013721.1 hypothetical protein 192957 8709074 HMPREF0424_0172 Gardnerella vaginalis 409-05 hypothetical protein YP_003373436.1 192745 R 553190 CDS YP_003373437.1 283782683 8709332 193519..193647 1 NC_013721.1 addiction module killer protein 193647 8709332 HMPREF0424_0173 Gardnerella vaginalis 409-05 addiction module killer protein YP_003373437.1 193519 D 553190 CDS YP_003373438.1 283782684 8709877 193641..193928 1 NC_013721.1 identified by match to protein family HMM TIGR02684; addiction module antidote protein 193928 8709877 HMPREF0424_0174 Gardnerella vaginalis 409-05 addiction module antidote protein YP_003373438.1 193641 D 553190 CDS YP_003373439.1 283782685 8709324 complement(194140..194724) 1 NC_013721.1 lipoprotein 194724 8709324 HMPREF0424_0175 Gardnerella vaginalis 409-05 lipoprotein YP_003373439.1 194140 R 553190 CDS YP_003373440.1 283782686 8709650 complement(195105..196184) 1 NC_013721.1 identified by match to protein family HMM PF00268; ribonucleoside-diphosphate reductase subunit beta 196184 8709650 HMPREF0424_0176 Gardnerella vaginalis 409-05 ribonucleoside-diphosphate reductase subunit beta YP_003373440.1 195105 R 553190 CDS YP_003373441.1 283782687 8709220 complement(196267..198492) 1 NC_013721.1 identified by match to protein family HMM PF00317; match to protein family HMM PF02867; match to protein family HMM PF08343; match to protein family HMM TIGR02506; ribonucleoside-diphosphate reductase subunit alpha 198492 8709220 HMPREF0424_0177 Gardnerella vaginalis 409-05 ribonucleoside-diphosphate reductase subunit alpha YP_003373441.1 196267 R 553190 CDS YP_003373442.1 283782688 8709444 complement(198578..199078) 1 NC_013721.1 identified by match to protein family HMM PF07972; match to protein family HMM TIGR00333; NrdI protein 199078 nrdI 8709444 nrdI Gardnerella vaginalis 409-05 NrdI protein YP_003373442.1 198578 R 553190 CDS YP_003373443.1 283782689 8708872 complement(199082..199342) 1 NC_013721.1 identified by match to protein family HMM PF00462; match to protein family HMM TIGR02194; glutaredoxin 199342 8708872 HMPREF0424_0179 Gardnerella vaginalis 409-05 glutaredoxin YP_003373443.1 199082 R 553190 CDS YP_003373444.1 283782690 8709587 199768..201222 1 NC_013721.1 identified by match to protein family HMM PF00393; match to protein family HMM PF03446; match to protein family HMM TIGR00873; 6-phosphogluconate dehydrogenase 201222 gnd 8709587 gnd Gardnerella vaginalis 409-05 6-phosphogluconate dehydrogenase YP_003373444.1 199768 D 553190 CDS YP_003373445.1 283782691 8709230 complement(201312..202649) 1 NC_013721.1 hypothetical protein 202649 8709230 HMPREF0424_0181 Gardnerella vaginalis 409-05 hypothetical protein YP_003373445.1 201312 R 553190 CDS YP_003373446.1 283782692 8709714 complement(202697..202879) 1 NC_013721.1 hypothetical protein 202879 8709714 HMPREF0424_0182 Gardnerella vaginalis 409-05 hypothetical protein YP_003373446.1 202697 R 553190 CDS YP_003373447.1 283782693 8709026 complement(202930..203754) 1 NC_013721.1 identified by match to protein family HMM TIGR01198; 6-phosphogluconolactonase 203754 pgl 8709026 pgl Gardnerella vaginalis 409-05 6-phosphogluconolactonase YP_003373447.1 202930 R 553190 CDS YP_003373448.1 283782694 8709466 complement(203809..204750) 1 NC_013721.1 OpcA protein 204750 8709466 HMPREF0424_0184 Gardnerella vaginalis 409-05 OpcA protein YP_003373448.1 203809 R 553190 CDS YP_003373449.1 283782695 8708861 complement(204747..206327) 1 NC_013721.1 identified by match to protein family HMM PF00479; match to protein family HMM PF02781; match to protein family HMM TIGR00871; glucose-6-phosphate dehydrogenase 206327 zwf 8708861 zwf Gardnerella vaginalis 409-05 glucose-6-phosphate dehydrogenase YP_003373449.1 204747 R 553190 CDS YP_003373450.1 283782696 8709413 complement(206431..208851) 1 NC_013721.1 identified by match to protein family HMM PF01757; hypothetical protein 208851 8709413 HMPREF0424_0186 Gardnerella vaginalis 409-05 hypothetical protein YP_003373450.1 206431 R 553190 CDS YP_003373451.1 283782697 8709999 209173..209667 1 NC_013721.1 identified by match to protein family HMM PF00719; inorganic diphosphatase 209667 ppa 8709999 ppa Gardnerella vaginalis 409-05 inorganic diphosphatase YP_003373451.1 209173 D 553190 CDS YP_003373452.1 283782698 8709280 complement(209817..210608) 1 NC_013721.1 hypothetical protein 210608 8709280 HMPREF0424_0188 Gardnerella vaginalis 409-05 hypothetical protein YP_003373452.1 209817 R 553190 CDS YP_003373453.1 283782699 8709834 210750..211640 1 NC_013721.1 identified by match to protein family HMM PF00486; transcriptional regulator domain-containing protein 211640 8709834 HMPREF0424_0189 Gardnerella vaginalis 409-05 transcriptional regulator domain-containing protein YP_003373453.1 210750 D 553190 CDS YP_003373454.1 283782700 8709027 211640..212314 1 NC_013721.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; match to protein family HMM TIGR01083; endonuclease III 212314 nth 8709027 nth Gardnerella vaginalis 409-05 endonuclease III YP_003373454.1 211640 D 553190 CDS YP_003373455.1 283782701 8709898 212445..213932 1 NC_013721.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 213932 8709898 HMPREF0424_0191 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003373455.1 212445 D 553190 CDS YP_003373456.1 283782702 8709302 213981..216758 1 NC_013721.1 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; valine--tRNA ligase 216758 valS 8709302 valS Gardnerella vaginalis 409-05 valine--tRNA ligase YP_003373456.1 213981 D 553190 CDS YP_003373457.1 283782703 8709864 complement(216854..217120) 1 NC_013721.1 identified by match to protein family HMM PF05016; match to protein family HMM TIGR02385; toxin-antitoxin system, toxin component, RelE family 217120 8709864 HMPREF0424_0193 Gardnerella vaginalis 409-05 toxin-antitoxin system, toxin component, RelE family YP_003373457.1 216854 R 553190 CDS YP_003373458.1 283782704 8709211 complement(217104..217454) 1 NC_013721.1 toxin-antitoxin system, antitoxin component 217454 8709211 HMPREF0424_0194 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component YP_003373458.1 217104 R 553190 CDS YP_003373459.1 283782705 8709604 217453..219249 1 NC_013721.1 identified by match to protein family HMM PF00750; match to protein family HMM PF03485; match to protein family HMM PF05746; match to protein family HMM TIGR00456; arginine--tRNA ligase 219249 argS 8709604 argS Gardnerella vaginalis 409-05 arginine--tRNA ligase YP_003373459.1 217453 D 553190 CDS YP_003373460.1 283782706 8709070 219492..221063 1 NC_013721.1 identified by match to protein family HMM PF05525; match to protein family HMM TIGR00796; branched-chain amino acid transport system II carrier protein 221063 brnQ 8709070 brnQ Gardnerella vaginalis 409-05 branched-chain amino acid transport system II carrier protein YP_003373460.1 219492 D 553190 CDS YP_003373461.1 283782707 8709399 complement(221177..221524) 1 NC_013721.1 hypothetical protein 221524 8709399 HMPREF0424_0197 Gardnerella vaginalis 409-05 hypothetical protein YP_003373461.1 221177 R 553190 CDS YP_003373462.1 283782708 8708878 221600..222115 1 NC_013721.1 identified by match to protein family HMM PF04138; GtrA-like protein 222115 8708878 HMPREF0424_0198 Gardnerella vaginalis 409-05 GtrA-like protein YP_003373462.1 221600 D 553190 CDS YP_003373463.1 283782709 8709368 222150..222842 1 NC_013721.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 222842 8709368 HMPREF0424_0199 Gardnerella vaginalis 409-05 phosphoglycerate mutase family protein YP_003373463.1 222150 D 553190 CDS YP_003373464.1 283782710 8709731 222871..223839 1 NC_013721.1 hypothetical protein 223839 8709731 HMPREF0424_0200 Gardnerella vaginalis 409-05 hypothetical protein YP_003373464.1 222871 D 553190 CDS YP_003373465.1 283782711 8709566 223905..225458 1 NC_013721.1 identified by match to protein family HMM PF00749; match to protein family HMM TIGR00464; glutamate--tRNA ligase 225458 gltX 8709566 gltX Gardnerella vaginalis 409-05 glutamate--tRNA ligase YP_003373465.1 223905 D 553190 CDS YP_003373466.1 283782712 8709179 225507..225641 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 225641 8709179 HMPREF0424_0202 Gardnerella vaginalis 409-05 hypothetical protein YP_003373466.1 225507 D 553190 CDS YP_003373467.1 283782713 8710057 226360..227652 1 NC_013721.1 identified by match to protein family HMM PF00149; Ser/Thr phosphatase family protein 227652 8710057 HMPREF0424_0205 Gardnerella vaginalis 409-05 Ser/Thr phosphatase family protein YP_003373467.1 226360 D 553190 CDS YP_003373468.1 283782714 8708827 227744..229105 1 NC_013721.1 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01072; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 229105 murA 8708827 murA Gardnerella vaginalis 409-05 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_003373468.1 227744 D 553190 CDS YP_003373469.1 283782715 8709251 229296..231209 1 NC_013721.1 identified by match to protein family HMM PF00069; kinase domain-containing protein 231209 8709251 HMPREF0424_0207 Gardnerella vaginalis 409-05 kinase domain-containing protein YP_003373469.1 229296 D 553190 CDS YP_003373470.1 283782716 8709002 231245..233578 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 233578 8709002 HMPREF0424_0208 Gardnerella vaginalis 409-05 hypothetical protein YP_003373470.1 231245 D 553190 CDS YP_003373471.1 283782717 8710054 complement(233856..234542) 1 NC_013721.1 identified by match to protein family HMM PF09335; hypothetical protein 234542 8710054 HMPREF0424_0210 Gardnerella vaginalis 409-05 hypothetical protein YP_003373471.1 233856 R 553190 CDS YP_003373472.1 283782718 8709569 234770..235513 1 NC_013721.1 hypothetical protein 235513 8709569 HMPREF0424_0211 Gardnerella vaginalis 409-05 hypothetical protein YP_003373472.1 234770 D 553190 CDS YP_003373473.1 283782719 8709021 235644..235913 1 NC_013721.1 identified by match to protein family HMM PF00312; match to protein family HMM TIGR00952; 30S ribosomal protein S15 235913 rpsO 8709021 rpsO Gardnerella vaginalis 409-05 30S ribosomal protein S15 YP_003373473.1 235644 D 553190 CDS YP_003373474.1 283782720 8709739 236259..239039 1 NC_013721.1 identified by match to protein family HMM PF00013; match to protein family HMM PF00575; match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM PF03726; match to protein family HMM TIGR02696; match to protein family HMM TIGR03591; guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase 239039 gpsI 8709739 gpsI Gardnerella vaginalis 409-05 guanosine pentaphosphate synthetase I/polyribonucleotide nucleotidyltransferase YP_003373474.1 236259 D 553190 CDS YP_003373475.1 283782721 8708780 239286..240149 1 NC_013721.1 identified by match to protein family HMM PF00248; oxidoreductase, aldo/keto reductase family protein 240149 8708780 HMPREF0424_0214 Gardnerella vaginalis 409-05 oxidoreductase, aldo/keto reductase family protein YP_003373475.1 239286 D 553190 CDS YP_003373476.1 283782722 8709338 240164..241129 1 NC_013721.1 identified by match to protein family HMM PF02578; hypothetical protein 241129 8709338 HMPREF0424_0215 Gardnerella vaginalis 409-05 hypothetical protein YP_003373476.1 240164 D 553190 CDS YP_003373477.1 283782723 8709885 241306..242730 1 NC_013721.1 hypothetical protein 242730 8709885 HMPREF0424_0216 Gardnerella vaginalis 409-05 hypothetical protein YP_003373477.1 241306 D 553190 CDS YP_003373478.1 283782724 8709217 242842..244176 1 NC_013721.1 identified by match to protein family HMM PF03051; peptidase C1-like protein 244176 8709217 HMPREF0424_0217 Gardnerella vaginalis 409-05 peptidase C1-like protein YP_003373478.1 242842 D 553190 CDS YP_003373479.1 283782725 8709802 244375..245556 1 NC_013721.1 identified by match to protein family HMM PF00793; match to protein family HMM TIGR00034; 3-deoxy-7-phosphoheptulonate synthase 245556 8709802 HMPREF0424_0218 Gardnerella vaginalis 409-05 3-deoxy-7-phosphoheptulonate synthase YP_003373479.1 244375 D 553190 CDS YP_003373480.1 283782726 8709257 245670..246167 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 246167 8709257 HMPREF0424_0219 Gardnerella vaginalis 409-05 hypothetical protein YP_003373480.1 245670 D 553190 CDS YP_003373481.1 283782727 8708823 246160..246870 1 NC_013721.1 identified by match to protein family HMM PF01048; match to protein family HMM TIGR01704; MTA/SAH nucleosidase 246870 mtnN 8708823 mtnN Gardnerella vaginalis 409-05 MTA/SAH nucleosidase YP_003373481.1 246160 D 553190 CDS YP_003373482.1 283782728 8709542 247077..248303 1 NC_013721.1 identified by match to protein family HMM PF01547; match to protein family HMM TIGR00975; phosphate ABC transporter substrate-binding protein 248303 pstS 8709542 pstS Gardnerella vaginalis 409-05 phosphate ABC transporter substrate-binding protein YP_003373482.1 247077 D 553190 CDS YP_003373483.1 283782729 8709688 248353..249357 1 NC_013721.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR02138; phosphate ABC transporter permease 249357 pstC 8709688 pstC Gardnerella vaginalis 409-05 phosphate ABC transporter permease YP_003373483.1 248353 D 553190 CDS YP_003373484.1 283782730 8709154 249358..250395 1 NC_013721.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR00974; phosphate ABC transporter permease 250395 pstA 8709154 pstA Gardnerella vaginalis 409-05 phosphate ABC transporter permease YP_003373484.1 249358 D 553190 CDS YP_003373485.1 283782731 8709045 250464..251243 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00972; phosphate ABC transporter ATP-binding protein 251243 pstB 8709045 pstB Gardnerella vaginalis 409-05 phosphate ABC transporter ATP-binding protein YP_003373485.1 250464 D 553190 CDS YP_003373486.1 283782732 8709445 251497..252891 1 NC_013721.1 identified by match to protein family HMM PF00860; purine transporter, AzgA family 252891 8709445 HMPREF0424_0225 Gardnerella vaginalis 409-05 purine transporter, AzgA family YP_003373486.1 251497 D 553190 CDS YP_003373487.1 283782733 8709831 253283..253804 1 NC_013721.1 identified by match to protein family HMM PF00466; 50S ribosomal protein L10 253804 rplJ 8709831 rplJ Gardnerella vaginalis 409-05 50S ribosomal protein L10 YP_003373487.1 253283 D 553190 CDS YP_003373488.1 283782734 8709456 253902..254282 1 NC_013721.1 identified by match to protein family HMM PF00542; match to protein family HMM TIGR00855; 50S ribosomal protein L7/L12 254282 rplL 8709456 rplL Gardnerella vaginalis 409-05 50S ribosomal protein L7/L12 YP_003373488.1 253902 D 553190 CDS YP_003373489.1 283782735 8709384 255160..256491 1 NC_013721.1 identified by match to protein family HMM PF00498; FHA domain-containing protein 256491 8709384 HMPREF0424_0228 Gardnerella vaginalis 409-05 FHA domain-containing protein YP_003373489.1 255160 D 553190 CDS YP_003373490.1 283782736 8709164 256512..260270 1 NC_013721.1 hypothetical protein 260270 8709164 HMPREF0424_0229 Gardnerella vaginalis 409-05 hypothetical protein YP_003373490.1 256512 D 553190 CDS YP_003373491.1 283782737 8709737 260267..260470 1 NC_013721.1 hypothetical protein 260470 8709737 HMPREF0424_0230 Gardnerella vaginalis 409-05 hypothetical protein YP_003373491.1 260267 D 553190 CDS YP_003373492.1 283782738 8709689 complement(260602..261456) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 261456 8709689 HMPREF0424_0231 Gardnerella vaginalis 409-05 hypothetical protein YP_003373492.1 260602 R 553190 CDS YP_003373493.1 283782739 8708899 complement(261494..261670) 1 NC_013721.1 identified by match to protein family HMM PF09723; match to protein family HMM TIGR02605; FmdB family regulatory protein 261670 8708899 HMPREF0424_0232 Gardnerella vaginalis 409-05 FmdB family regulatory protein YP_003373493.1 261494 R 553190 CDS YP_003373494.1 283782740 8709572 261980..263062 1 NC_013721.1 hypothetical protein 263062 8709572 HMPREF0424_0233 Gardnerella vaginalis 409-05 hypothetical protein YP_003373494.1 261980 D 553190 CDS YP_003373495.1 283782741 8708982 263235..263528 1 NC_013721.1 identified by match to protein family HMM PF00166; chaperonin GroS 263528 groS 8708982 groS Gardnerella vaginalis 409-05 chaperonin GroS YP_003373495.1 263235 D 553190 CDS YP_003373496.1 283782742 8709507 263722..264819 1 NC_013721.1 identified by match to protein family HMM PF00155; match to protein family HMM TIGR01141; histidinol-phosphate transaminase 264819 hisC 8709507 hisC Gardnerella vaginalis 409-05 histidinol-phosphate transaminase YP_003373496.1 263722 D 553190 CDS YP_003373497.1 283782743 8710064 265216..265386 1 NC_013721.1 identified by match to protein family HMM PF00471; match to protein family HMM TIGR01023; 50S ribosomal protein L33 265386 rpmG 8710064 rpmG Gardnerella vaginalis 409-05 50S ribosomal protein L33 YP_003373497.1 265216 D 553190 CDS YP_003373498.1 283782744 8709403 265511..266782 1 NC_013721.1 identified by match to protein family HMM PF01565; match to protein family HMM PF02873; UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein 266782 8709403 HMPREF0424_0240 Gardnerella vaginalis 409-05 UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein YP_003373498.1 265511 D 553190 CDS YP_003373499.1 283782745 8709843 267073..268704 1 NC_013721.1 identified by match to protein family HMM PF00324; amino acid permease 268704 8709843 HMPREF0424_0241 Gardnerella vaginalis 409-05 amino acid permease YP_003373499.1 267073 D 553190 CDS YP_003373500.1 283782746 8709600 268827..269159 1 NC_013721.1 identified by match to protein family HMM PF00037; ferredoxin 1 269159 8709600 HMPREF0424_0242 Gardnerella vaginalis 409-05 ferredoxin 1 YP_003373500.1 268827 D 553190 CDS YP_003373501.1 283782747 8709998 complement(269194..270423) 1 NC_013721.1 identified by match to protein family HMM PF00817; ImpB/MucB/SamB family protein 270423 8709998 HMPREF0424_0243 Gardnerella vaginalis 409-05 ImpB/MucB/SamB family protein YP_003373501.1 269194 R 553190 CDS YP_003373502.1 283782748 8709132 270614..271546 1 NC_013721.1 identified by match to protein family HMM PF00892; hypothetical protein 271546 8709132 HMPREF0424_0244 Gardnerella vaginalis 409-05 hypothetical protein YP_003373502.1 270614 D 553190 CDS YP_003373503.1 283782749 8710071 complement(271843..271965) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 271965 8710071 HMPREF0424_0246 Gardnerella vaginalis 409-05 hypothetical protein YP_003373503.1 271843 R 553190 CDS YP_003373504.1 283782750 8709030 272052..274901 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 274901 8709030 HMPREF0424_0247 Gardnerella vaginalis 409-05 hypothetical protein YP_003373504.1 272052 D 553190 CDS YP_003373505.1 283782751 8709372 275085..275378 1 NC_013721.1 identified by match to protein family HMM PF02583; hypothetical protein 275378 8709372 HMPREF0424_0248 Gardnerella vaginalis 409-05 hypothetical protein YP_003373505.1 275085 D 553190 CDS YP_003373506.1 283782752 8709779 275394..276062 1 NC_013721.1 identified by match to protein family HMM PF01205; match to protein family HMM PF09186; match to protein family HMM TIGR00257; hypothetical protein 276062 8709779 HMPREF0424_0249 Gardnerella vaginalis 409-05 hypothetical protein YP_003373506.1 275394 D 553190 CDS YP_003373507.1 283782753 8708952 276073..276699 1 NC_013721.1 hypothetical protein 276699 8708952 HMPREF0424_0250 Gardnerella vaginalis 409-05 hypothetical protein YP_003373507.1 276073 D 553190 CDS YP_003373508.1 283782754 8709815 276717..278882 1 NC_013721.1 identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 278882 malQ_1 8709815 malQ_1 Gardnerella vaginalis 409-05 4-alpha-glucanotransferase YP_003373508.1 276717 D 553190 CDS YP_003373509.1 283782755 8708828 279143..279592 1 NC_013721.1 identified by match to protein family HMM PF00572; match to protein family HMM TIGR01066; 50S ribosomal protein L13 279592 rplM 8708828 rplM Gardnerella vaginalis 409-05 50S ribosomal protein L13 YP_003373509.1 279143 D 553190 CDS YP_003373510.1 283782756 8709406 279610..280098 1 NC_013721.1 identified by match to protein family HMM PF00380; 30S ribosomal protein S9 280098 rpsI 8709406 rpsI Gardnerella vaginalis 409-05 30S ribosomal protein S9 YP_003373510.1 279610 D 553190 CDS YP_003373511.1 283782757 8709223 280455..283160 1 NC_013721.1 identified by match to protein family HMM PF00171; match to protein family HMM PF00465; aldehyde-alcohol dehydrogenase 2 283160 adh 8709223 adh Gardnerella vaginalis 409-05 aldehyde-alcohol dehydrogenase 2 YP_003373511.1 280455 D 553190 CDS YP_003373512.1 283782758 8709991 283809..284459 1 NC_013721.1 identified by match to protein family HMM PF00297; match to protein family HMM TIGR03625; 50S ribosomal protein L3 284459 rplC 8709991 rplC Gardnerella vaginalis 409-05 50S ribosomal protein L3 YP_003373512.1 283809 D 553190 CDS YP_003373513.1 283782759 8709938 284465..285130 1 NC_013721.1 identified by match to protein family HMM PF00573; 50S ribosomal protein L4/L1 family protein 285130 rplD 8709938 rplD Gardnerella vaginalis 409-05 50S ribosomal protein L4/L1 family protein YP_003373513.1 284465 D 553190 CDS YP_003373514.1 283782760 8708744 285136..285432 1 NC_013721.1 identified by match to protein family HMM PF00276; 50S ribosomal protein L23 285432 rplW 8708744 rplW Gardnerella vaginalis 409-05 50S ribosomal protein L23 YP_003373514.1 285136 D 553190 CDS YP_003373515.1 283782761 8709733 285467..286297 1 NC_013721.1 identified by match to protein family HMM PF00181; match to protein family HMM PF03947; match to protein family HMM TIGR01171; 50S ribosomal protein L2 286297 rplB 8709733 rplB Gardnerella vaginalis 409-05 50S ribosomal protein L2 YP_003373515.1 285467 D 553190 CDS YP_003864087.1 304653863 9715066 286313..286591 1 NC_013721.1 30S ribosomal protein S19 286591 9715066 HMPREF0424_0258a Gardnerella vaginalis 409-05 30S ribosomal protein S19 YP_003864087.1 286313 D 553190 CDS YP_003373516.1 283782762 8709225 286608..286967 1 NC_013721.1 identified by match to protein family HMM PF00237; match to protein family HMM TIGR01044; 50S ribosomal protein L22 286967 rplV 8709225 rplV Gardnerella vaginalis 409-05 50S ribosomal protein L22 YP_003373516.1 286608 D 553190 CDS YP_003373517.1 283782763 8709691 286970..287788 1 NC_013721.1 identified by match to protein family HMM PF00189; match to protein family HMM PF00417; match to protein family HMM PF07650; match to protein family HMM TIGR01009; 30S ribosomal protein S3 287788 rpsC 8709691 rpsC Gardnerella vaginalis 409-05 30S ribosomal protein S3 YP_003373517.1 286970 D 553190 CDS YP_003373518.1 283782764 8709741 287793..288212 1 NC_013721.1 identified by match to protein family HMM PF00252; match to protein family HMM TIGR01164; 50S ribosomal protein L16 288212 rplP 8709741 rplP Gardnerella vaginalis 409-05 50S ribosomal protein L16 YP_003373518.1 287793 D 553190 CDS YP_003373519.1 283782765 8709484 288212..288463 1 NC_013721.1 identified by match to protein family HMM PF00831; match to protein family HMM TIGR00012; 50S ribosomal protein L29 288463 rpmC 8709484 rpmC Gardnerella vaginalis 409-05 50S ribosomal protein L29 YP_003373519.1 288212 D 553190 CDS YP_004770524.1 342516750 11031913 288466..288732 1 NC_013721.1 30S ribosomal protein S17 288732 11031913 HMPREF0424_p1 Gardnerella vaginalis 409-05 30S ribosomal protein S17 YP_004770524.1 288466 D 553190 CDS YP_004770525.1 342516751 11031914 288823..289191 1 NC_013721.1 50S ribosomal protein L14 289191 11031914 HMPREF0424_p2 Gardnerella vaginalis 409-05 50S ribosomal protein L14 YP_004770525.1 288823 D 553190 CDS YP_003373520.1 283782766 8708985 289193..289528 1 NC_013721.1 identified by match to protein family HMM PF00467; match to protein family HMM TIGR01079; 50S ribosomal protein L24 289528 rplX 8708985 rplX Gardnerella vaginalis 409-05 50S ribosomal protein L24 YP_003373520.1 289193 D 553190 CDS YP_003373521.1 283782767 8709277 289525..290097 1 NC_013721.1 identified by match to protein family HMM PF00281; match to protein family HMM PF00673; 50S ribosomal protein L5 290097 8709277 HMPREF0424_0264 Gardnerella vaginalis 409-05 50S ribosomal protein L5 YP_003373521.1 289525 D 553190 CDS YP_003864088.1 304653864 9715068 290099..290284 1 NC_013721.1 30S ribosomal protein S14 290284 9715068 HMPREF0424_0264a Gardnerella vaginalis 409-05 30S ribosomal protein S14 YP_003864088.1 290099 D 553190 CDS YP_003373522.1 283782768 8709804 290371..290769 1 NC_013721.1 identified by match to protein family HMM PF00410; 30S ribosomal protein S8 290769 rpsH 8709804 rpsH Gardnerella vaginalis 409-05 30S ribosomal protein S8 YP_003373522.1 290371 D 553190 CDS YP_003373523.1 283782769 8709183 290786..291325 1 NC_013721.1 identified by match to protein family HMM PF00347; match to protein family HMM TIGR03654; 50S ribosomal protein L6 291325 rplF 8709183 rplF Gardnerella vaginalis 409-05 50S ribosomal protein L6 YP_003373523.1 290786 D 553190 CDS YP_003373524.1 283782770 8709853 291327..291698 1 NC_013721.1 identified by match to protein family HMM PF00861; match to protein family HMM TIGR00060; 50S ribosomal protein L18 291698 rplR 8709853 rplR Gardnerella vaginalis 409-05 50S ribosomal protein L18 YP_003373524.1 291327 D 553190 CDS YP_003373525.1 283782771 8709344 291722..292423 1 NC_013721.1 identified by match to protein family HMM PF00333; match to protein family HMM PF03719; match to protein family HMM TIGR01021; 30S ribosomal protein S5 292423 rpsE 8709344 rpsE Gardnerella vaginalis 409-05 30S ribosomal protein S5 YP_003373525.1 291722 D 553190 CDS YP_003373526.1 283782772 8709393 292423..292605 1 NC_013721.1 identified by match to protein family HMM PF00327; match to protein family HMM TIGR01308; 50S ribosomal protein L30 292605 rpmD 8709393 rpmD Gardnerella vaginalis 409-05 50S ribosomal protein L30 YP_003373526.1 292423 D 553190 CDS YP_003373527.1 283782773 8709580 292608..293063 1 NC_013721.1 identified by match to protein family HMM PF00256; match to protein family HMM PF01305; match to protein family HMM TIGR01071; 50S ribosomal protein L15 293063 rplO 8709580 rplO Gardnerella vaginalis 409-05 50S ribosomal protein L15 YP_003373527.1 292608 D 553190 CDS YP_003373528.1 283782774 8709206 293258..294601 1 NC_013721.1 identified by match to protein family HMM PF00344; match to protein family HMM TIGR00967; preprotein translocase subunit SecY 294601 secY 8709206 secY Gardnerella vaginalis 409-05 preprotein translocase subunit SecY YP_003373528.1 293258 D 553190 CDS YP_003373529.1 283782775 8709709 294630..295190 1 NC_013721.1 identified by match to protein family HMM PF00406; match to protein family HMM TIGR01351; adenylate kinase 295190 8709709 HMPREF0424_0272 Gardnerella vaginalis 409-05 adenylate kinase YP_003373529.1 294630 D 553190 CDS YP_003373530.1 283782776 8708883 295572..295685 1 NC_013721.1 50S ribosomal protein L36 295685 rpmJ 8708883 rpmJ Gardnerella vaginalis 409-05 50S ribosomal protein L36 YP_003373530.1 295572 D 553190 CDS YP_003373531.1 283782777 8709796 295830..296207 1 NC_013721.1 identified by match to protein family HMM PF00416; match to protein family HMM TIGR03631; 30S ribosomal protein S13 296207 rpsM 8709796 rpsM Gardnerella vaginalis 409-05 30S ribosomal protein S13 YP_003373531.1 295830 D 553190 CDS YP_003373532.1 283782778 8709424 296291..296689 1 NC_013721.1 identified by match to protein family HMM PF00411; match to protein family HMM TIGR03632; 30S ribosomal protein S11 296689 rpsK 8709424 rpsK Gardnerella vaginalis 409-05 30S ribosomal protein S11 YP_003373532.1 296291 D 553190 CDS YP_003373533.1 283782779 8709620 296769..297764 1 NC_013721.1 identified by match to protein family HMM PF01000; match to protein family HMM PF01193; match to protein family HMM PF03118; match to protein family HMM TIGR02027; DNA-directed RNA polymerase subunit alpha 297764 rpoA 8709620 rpoA Gardnerella vaginalis 409-05 DNA-directed RNA polymerase subunit alpha YP_003373533.1 296769 D 553190 CDS YP_003373534.1 283782780 8708771 297842..298276 1 NC_013721.1 identified by match to protein family HMM PF01196; match to protein family HMM TIGR00059; 50S ribosomal protein L17 298276 rplQ 8708771 rplQ Gardnerella vaginalis 409-05 50S ribosomal protein L17 YP_003373534.1 297842 D 553190 CDS YP_003373535.1 283782781 8709513 298404..299663 1 NC_013721.1 hypothetical protein 299663 8709513 HMPREF0424_0279 Gardnerella vaginalis 409-05 hypothetical protein YP_003373535.1 298404 D 553190 CDS YP_003373536.1 283782782 8709172 299782..300699 1 NC_013721.1 identified by match to protein family HMM PF01416; match to protein family HMM TIGR00071; tRNA pseudouridine synthase A 300699 truA 8709172 truA Gardnerella vaginalis 409-05 tRNA pseudouridine synthase A YP_003373536.1 299782 D 553190 CDS YP_003373537.1 283782783 8710045 300907..301035 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 301035 8710045 HMPREF0424_0282 Gardnerella vaginalis 409-05 hypothetical protein YP_003373537.1 300907 D 553190 CDS YP_003373538.1 283782784 8709433 complement(301658..302659) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 302659 8709433 HMPREF0424_0283 Gardnerella vaginalis 409-05 hypothetical protein YP_003373538.1 301658 R 553190 CDS YP_003373539.1 283782785 8708838 302831..303913 1 NC_013721.1 identified by match to protein family HMM PF08529; match to protein family HMM TIGR01953; transcription termination factor NusA 303913 nusA 8708838 nusA Gardnerella vaginalis 409-05 transcription termination factor NusA YP_003373539.1 302831 D 553190 CDS YP_003373540.1 283782786 8709621 304232..307096 1 NC_013721.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00071; match to protein family HMM PF03144; match to protein family HMM PF04760; match to protein family HMM TIGR00231; match to protein family HMM TIGR00487; translation initiation factor IF-2 307096 infB 8709621 infB Gardnerella vaginalis 409-05 translation initiation factor IF-2 YP_003373540.1 304232 D 553190 CDS YP_003373541.1 283782787 8708948 307099..307653 1 NC_013721.1 identified by match to protein family HMM PF02033; match to protein family HMM TIGR00082; ribosome-binding factor A 307653 rbfA 8708948 rbfA Gardnerella vaginalis 409-05 ribosome-binding factor A YP_003373541.1 307099 D 553190 CDS YP_003373542.1 283782788 8709817 307702..308805 1 NC_013721.1 identified by match to protein family HMM PF01509; match to protein family HMM TIGR00431; tRNA pseudouridine synthase B 308805 truB 8709817 truB Gardnerella vaginalis 409-05 tRNA pseudouridine synthase B YP_003373542.1 307702 D 553190 CDS YP_003373543.1 283782789 8708819 308867..310111 1 NC_013721.1 identified by match to protein family HMM PF01687; match to protein family HMM PF06574; riboflavin kinase 310111 8708819 HMPREF0424_0288 Gardnerella vaginalis 409-05 riboflavin kinase YP_003373543.1 308867 D 553190 CDS YP_003373544.1 283782790 8709911 310223..311266 1 NC_013721.1 identified by match to protein family HMM PF03747; ADP-ribosylglycohydrolase 311266 8709911 HMPREF0424_0289 Gardnerella vaginalis 409-05 ADP-ribosylglycohydrolase YP_003373544.1 310223 D 553190 CDS YP_003373545.1 283782791 8709066 311321..312445 1 NC_013721.1 identified by match to protein family HMM PF00294; kinase, PfkB family 312445 8709066 HMPREF0424_0290 Gardnerella vaginalis 409-05 kinase, PfkB family YP_003373545.1 311321 D 553190 CDS YP_003373546.1 283782792 8709438 312525..314048 1 NC_013721.1 identified by match to protein family HMM PF02133; permease, cytosine/purine, uracil, thiamine, allantoin family 314048 8709438 HMPREF0424_0291 Gardnerella vaginalis 409-05 permease, cytosine/purine, uracil, thiamine, allantoin family YP_003373546.1 312525 D 553190 CDS YP_003373547.1 283782793 8709631 314091..314648 1 NC_013721.1 identified by match to protein family HMM PF00857; isochorismatase family protein 314648 8709631 HMPREF0424_0292 Gardnerella vaginalis 409-05 isochorismatase family protein YP_003373547.1 314091 D 553190 CDS YP_003373548.1 283782794 8709000 complement(314677..316164) 1 NC_013721.1 identified by match to protein family HMM TIGR00416; DNA repair protein RadA 316164 radA 8709000 radA Gardnerella vaginalis 409-05 DNA repair protein RadA YP_003373548.1 314677 R 553190 CDS YP_003373549.1 283782795 8709203 316272..316928 1 NC_013721.1 hypothetical protein 316928 8709203 HMPREF0424_0294 Gardnerella vaginalis 409-05 hypothetical protein YP_003373549.1 316272 D 553190 CDS YP_003373550.1 283782796 8709738 317427..317711 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 317711 8709738 HMPREF0424_0295 Gardnerella vaginalis 409-05 hypothetical protein YP_003373550.1 317427 D 553190 CDS YP_003373551.1 283782797 8709034 complement(317840..318538) 1 NC_013721.1 identified by match to protein family HMM PF06026; match to protein family HMM TIGR00021; ribose 5-phosphate isomerase A 318538 rpiA 8709034 rpiA Gardnerella vaginalis 409-05 ribose 5-phosphate isomerase A YP_003373551.1 317840 R 553190 CDS YP_003373552.1 283782798 8709392 complement(318885..319970) 1 NC_013721.1 identified by match to protein family HMM PF00075; ribonuclease HI 319970 rnhA 8709392 rnhA Gardnerella vaginalis 409-05 ribonuclease HI YP_003373552.1 318885 R 553190 CDS YP_003373553.1 283782799 8708877 complement(320006..321679) 1 NC_013721.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01132; phosphoglucomutase 321679 pgm 8708877 pgm Gardnerella vaginalis 409-05 phosphoglucomutase YP_003373553.1 320006 R 553190 CDS YP_003373554.1 283782800 8709270 complement(321715..322830) 1 NC_013721.1 identified by match to protein family HMM PF00781; diacylglycerol kinase catalytic domain (presumed) 322830 8709270 HMPREF0424_0299 Gardnerella vaginalis 409-05 diacylglycerol kinase catalytic domain (presumed) YP_003373554.1 321715 R 553190 CDS YP_003373555.1 283782801 8709056 323221..325038 1 NC_013721.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG protein 325038 8709056 HMPREF0424_0300 Gardnerella vaginalis 409-05 ErfK/YbiS/YcfS/YnhG protein YP_003373555.1 323221 D 553190 CDS YP_003373556.1 283782802 8709436 325047..326519 1 NC_013721.1 hypothetical protein 326519 8709436 HMPREF0424_0301 Gardnerella vaginalis 409-05 hypothetical protein YP_003373556.1 325047 D 553190 CDS YP_003373557.1 283782803 8709150 326633..329089 1 NC_013721.1 identified by match to protein family HMM PF00326; match to protein family HMM PF02897; peptidase 329089 8709150 HMPREF0424_0302 Gardnerella vaginalis 409-05 peptidase YP_003373557.1 326633 D 553190 CDS YP_003373558.1 283782804 8709788 329259..329969 1 NC_013721.1 identified by match to protein family HMM PF00027; match to protein family HMM PF00325; cyclic nucleotide-binding domain-containing protein 329969 8709788 HMPREF0424_0303 Gardnerella vaginalis 409-05 cyclic nucleotide-binding domain-containing protein YP_003373558.1 329259 D 553190 CDS YP_003373559.1 283782805 8709292 330028..332349 1 NC_013721.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase 332349 8709292 HMPREF0424_0304 Gardnerella vaginalis 409-05 transglycosylase YP_003373559.1 330028 D 553190 CDS YP_003373560.1 283782806 8709984 complement(332493..333647) 1 NC_013721.1 identified by match to protein family HMM PF01180; dihydroorotate oxidase 333647 8709984 HMPREF0424_0305 Gardnerella vaginalis 409-05 dihydroorotate oxidase YP_003373560.1 332493 R 553190 CDS YP_003373561.1 283782807 8709795 335221..335784 1 NC_013721.1 LPXTG-motif cell wall anchor domain-containing protein 335784 8709795 HMPREF0424_0307 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003373561.1 335221 D 553190 CDS YP_003373562.1 283782808 8708983 336198..336494 1 NC_013721.1 identified by match to protein family HMM PF01250; match to protein family HMM TIGR00166; 30S ribosomal protein S6 336494 rpsF 8708983 rpsF Gardnerella vaginalis 409-05 30S ribosomal protein S6 YP_003373562.1 336198 D 553190 CDS YP_003373563.1 283782809 8708818 336645..337226 1 NC_013721.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; ssDNA-binding protein 337226 8708818 HMPREF0424_0309 Gardnerella vaginalis 409-05 ssDNA-binding protein YP_003373563.1 336645 D 553190 CDS YP_003373564.1 283782810 8709283 337362..337610 1 NC_013721.1 identified by match to protein family HMM PF01084; match to protein family HMM TIGR00165; 30S ribosomal protein S18 337610 rpsR 8709283 rpsR Gardnerella vaginalis 409-05 30S ribosomal protein S18 YP_003373564.1 337362 D 553190 CDS YP_003373565.1 283782811 8709192 337627..338073 1 NC_013721.1 identified by match to protein family HMM PF01281; match to protein family HMM PF03948; match to protein family HMM TIGR00158; 50S ribosomal protein L9 338073 rplI 8709192 rplI Gardnerella vaginalis 409-05 50S ribosomal protein L9 YP_003373565.1 337627 D 553190 CDS YP_003373566.1 283782812 8708972 338353..339555 1 NC_013721.1 identified by match to protein family HMM PF00288; match to protein family HMM PF08544; match to protein family HMM TIGR00549; mevalonate kinase 339555 mvk 8708972 mvk Gardnerella vaginalis 409-05 mevalonate kinase YP_003373566.1 338353 D 553190 CDS YP_003373567.1 283782813 8709675 339691..340788 1 NC_013721.1 identified by match to protein family HMM PF00288; match to protein family HMM TIGR01240; diphosphomevalonate decarboxylase 340788 mvaD 8709675 mvaD Gardnerella vaginalis 409-05 diphosphomevalonate decarboxylase YP_003373567.1 339691 D 553190 CDS YP_003373568.1 283782814 8708789 340798..343137 1 NC_013721.1 identified by match to protein family HMM PF00288; match to protein family HMM PF01070; match to protein family HMM PF08544; match to protein family HMM TIGR01220; match to protein family HMM TIGR02151; isopentenyl-diphosphate delta-isomerase 343137 fni 8708789 fni Gardnerella vaginalis 409-05 isopentenyl-diphosphate delta-isomerase YP_003373568.1 340798 D 553190 CDS YP_003373569.1 283782815 8708835 343266..343460 1 NC_013721.1 identified by match to protein family HMM PF00830; match to protein family HMM TIGR00009; 50S ribosomal protein L28 343460 rpmB 8708835 rpmB Gardnerella vaginalis 409-05 50S ribosomal protein L28 YP_003373569.1 343266 D 553190 CDS YP_003373570.1 283782816 8709514 343612..345990 1 NC_013721.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; ATP-dependent DNA helicase RecG 345990 8709514 HMPREF0424_0316 Gardnerella vaginalis 409-05 ATP-dependent DNA helicase RecG YP_003373570.1 343612 D 553190 CDS YP_003373571.1 283782817 8709534 346280..347428 1 NC_013721.1 identified by match to protein family HMM PF00294; match to protein family HMM PF08279; kinase, PfkB family 347428 8709534 HMPREF0424_0317 Gardnerella vaginalis 409-05 kinase, PfkB family YP_003373571.1 346280 D 553190 CDS YP_003373572.1 283782818 8709627 347569..347694 1 NC_013721.1 hypothetical protein 347694 8709627 HMPREF0424_0318 Gardnerella vaginalis 409-05 hypothetical protein YP_003373572.1 347569 D 553190 CDS YP_003373573.1 283782819 8709087 347749..348687 1 NC_013721.1 identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 348687 8709087 HMPREF0424_0319 Gardnerella vaginalis 409-05 inosine-uridine preferring nucleoside hydrolase YP_003373573.1 347749 D 553190 CDS YP_003373574.1 283782820 8709932 348806..350230 1 NC_013721.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 350230 8709932 HMPREF0424_0320 Gardnerella vaginalis 409-05 transporter, major facilitator family protein YP_003373574.1 348806 D 553190 CDS YP_003373575.1 283782821 8709378 350485..351069 1 NC_013721.1 identified by match to protein family HMM PF03602; match to protein family HMM TIGR00095; RsmD family RNA methyltransferase 351069 8709378 HMPREF0424_0321 Gardnerella vaginalis 409-05 RsmD family RNA methyltransferase YP_003373575.1 350485 D 553190 CDS YP_003373576.1 283782822 8709367 complement(351149..351367) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 351367 8709367 HMPREF0424_0322 Gardnerella vaginalis 409-05 hypothetical protein YP_003373576.1 351149 R 553190 CDS YP_003373577.1 283782823 8708806 complement(351785..352651) 1 NC_013721.1 identified by match to protein family HMM PF01746; tRNA (guanine-N(1)-)-methyltransferase 352651 trmD 8708806 trmD Gardnerella vaginalis 409-05 tRNA (guanine-N(1)-)-methyltransferase YP_003373577.1 351785 R 553190 CDS YP_003373578.1 283782824 8709470 complement(352693..353292) 1 NC_013721.1 identified by match to protein family HMM PF01782; match to protein family HMM PF05239; match to protein family HMM TIGR02273; 16S rRNA processing protein RimM 353292 rimM 8709470 rimM Gardnerella vaginalis 409-05 16S rRNA processing protein RimM YP_003373578.1 352693 R 553190 CDS YP_003373579.1 283782825 8708934 complement(353294..353527) 1 NC_013721.1 hypothetical protein 353527 8708934 HMPREF0424_0325 Gardnerella vaginalis 409-05 hypothetical protein YP_003373579.1 353294 R 553190 CDS YP_003373580.1 283782826 8708935 complement(353530..354000) 1 NC_013721.1 identified by match to protein family HMM PF00886; match to protein family HMM TIGR00002; 30S ribosomal protein S16 354000 rpsP 8708935 rpsP Gardnerella vaginalis 409-05 30S ribosomal protein S16 YP_003373580.1 353530 R 553190 CDS YP_003373581.1 283782827 8709592 complement(354117..355292) 1 NC_013721.1 identified by match to protein family HMM PF03372; endonuclease/exonuclease/phosphatase family protein 355292 8709592 HMPREF0424_0327 Gardnerella vaginalis 409-05 endonuclease/exonuclease/phosphatase family protein YP_003373581.1 354117 R 553190 CDS YP_003373582.1 283782828 8709042 complement(355289..356959) 1 NC_013721.1 identified by match to protein family HMM PF00448; match to protein family HMM PF02881; match to protein family HMM PF02978; match to protein family HMM TIGR00959; signal recognition particle protein 356959 ffh 8709042 ffh Gardnerella vaginalis 409-05 signal recognition particle protein YP_003373582.1 355289 R 553190 CDS YP_003373583.1 283782829 8709735 complement(357067..358833) 1 NC_013721.1 identified by match to protein family HMM PF01406; match to protein family HMM PF09190; match to protein family HMM PF09334; match to protein family HMM TIGR00435; cysteine--tRNA ligase 358833 cysS 8709735 cysS Gardnerella vaginalis 409-05 cysteine--tRNA ligase YP_003373583.1 357067 R 553190 CDS YP_003373584.1 283782830 8709196 359229..360566 1 NC_013721.1 identified by match to protein family HMM PF04095; match to protein family HMM TIGR01513; nicotinate phosphoribosyltransferase 360566 8709196 HMPREF0424_0330 Gardnerella vaginalis 409-05 nicotinate phosphoribosyltransferase YP_003373584.1 359229 D 553190 CDS YP_003373585.1 283782831 8709887 360801..361130 1 NC_013721.1 hypothetical protein 361130 8709887 HMPREF0424_0331 Gardnerella vaginalis 409-05 hypothetical protein YP_003373585.1 360801 D 553190 CDS YP_003373586.1 283782832 8709167 361257..361805 1 NC_013721.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR01510; pantetheine-phosphate adenylyltransferase 361805 coaD 8709167 coaD Gardnerella vaginalis 409-05 pantetheine-phosphate adenylyltransferase YP_003373586.1 361257 D 553190 CDS YP_003373587.1 283782833 8709904 361821..362858 1 NC_013721.1 hypothetical protein 362858 8709904 HMPREF0424_0333 Gardnerella vaginalis 409-05 hypothetical protein YP_003373587.1 361821 D 553190 CDS YP_003373588.1 283782834 8709343 362861..363490 1 NC_013721.1 identified by match to protein family HMM PF02620; hypothetical protein 363490 8709343 HMPREF0424_0334 Gardnerella vaginalis 409-05 hypothetical protein YP_003373588.1 362861 D 553190 CDS YP_003373589.1 283782835 8708787 363615..363809 1 NC_013721.1 identified by match to protein family HMM PF01783; match to protein family HMM TIGR01031; 50S ribosomal protein L32 363809 rpmF 8708787 rpmF Gardnerella vaginalis 409-05 50S ribosomal protein L32 YP_003373589.1 363615 D 553190 CDS YP_003373590.1 283782836 8709482 complement(363859..364587) 1 NC_013721.1 identified by match to protein family HMM PF00035; match to protein family HMM PF00636; match to protein family HMM TIGR02191; ribonuclease III 364587 rnc 8709482 rnc Gardnerella vaginalis 409-05 ribonuclease III YP_003373590.1 363859 R 553190 CDS YP_003373591.1 283782837 8709824 complement(364628..364768) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 364768 8709824 HMPREF0424_0337 Gardnerella vaginalis 409-05 hypothetical protein YP_003373591.1 364628 R 553190 CDS YP_003373592.1 283782838 8709291 364825..366939 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 366939 8709291 HMPREF0424_0338 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373592.1 364825 D 553190 CDS YP_003373593.1 283782839 8710018 367006..367767 1 NC_013721.1 identified by match to protein family HMM PF01138; match to protein family HMM PF03725; match to protein family HMM TIGR01966; tRNA nucleotidyltransferase 367767 rph 8710018 rph Gardnerella vaginalis 409-05 tRNA nucleotidyltransferase YP_003373593.1 367006 D 553190 CDS YP_003373594.1 283782840 8708875 367790..368476 1 NC_013721.1 identified by match to protein family HMM PF01725; Ham1 family protein 368476 8708875 HMPREF0424_0340 Gardnerella vaginalis 409-05 Ham1 family protein YP_003373594.1 367790 D 553190 CDS YP_003373595.1 283782841 8710039 369067..370761 1 NC_013721.1 identified by match to protein family HMM PF00342; glucose-6-phosphate isomerase 370761 pgi 8710039 pgi Gardnerella vaginalis 409-05 glucose-6-phosphate isomerase YP_003373595.1 369067 D 553190 CDS YP_003373596.1 283782842 8709578 371198..371344 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 371344 8709578 HMPREF0424_0345 Gardnerella vaginalis 409-05 hypothetical protein YP_003373596.1 371198 D 553190 CDS YP_003373597.1 283782843 8708897 371604..373352 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 373352 8708897 HMPREF0424_0346 Gardnerella vaginalis 409-05 ABC transporter permease YP_003373597.1 371604 D 553190 CDS YP_003373598.1 283782844 8709964 373412..374947 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 374947 8709964 HMPREF0424_0347 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373598.1 373412 D 553190 CDS YP_003373599.1 283782845 8709274 375195..375560 1 NC_013721.1 identified by match to protein family HMM PF01245; match to protein family HMM TIGR01024; 50S ribosomal protein L19 375560 rplS 8709274 rplS Gardnerella vaginalis 409-05 50S ribosomal protein L19 YP_003373599.1 375195 D 553190 CDS YP_003373600.1 283782846 8709816 375590..376378 1 NC_013721.1 identified by match to protein family HMM PF00717; match to protein family HMM TIGR02227; signal peptidase I 376378 lepB 8709816 lepB Gardnerella vaginalis 409-05 signal peptidase I YP_003373600.1 375590 D 553190 CDS YP_003373601.1 283782847 8708895 376513..377256 1 NC_013721.1 identified by match to protein family HMM PF01351; ribonuclease HII 377256 rnhB 8708895 rnhB Gardnerella vaginalis 409-05 ribonuclease HII YP_003373601.1 376513 D 553190 CDS YP_003373602.1 283782848 8709794 377270..378373 1 NC_013721.1 identified by match to protein family HMM PF00356; LacI family transcriptional regulator 378373 8709794 HMPREF0424_0351 Gardnerella vaginalis 409-05 LacI family transcriptional regulator YP_003373602.1 377270 D 553190 CDS YP_003373603.1 283782849 8709238 378643..381198 1 NC_013721.1 hypothetical protein 381198 8709238 HMPREF0424_0352 Gardnerella vaginalis 409-05 hypothetical protein YP_003373603.1 378643 D 553190 CDS YP_003373604.1 283782850 8709048 381250..381960 1 NC_013721.1 identified by match to protein family HMM PF09352; hypothetical protein 381960 8709048 HMPREF0424_0353 Gardnerella vaginalis 409-05 hypothetical protein YP_003373604.1 381250 D 553190 CDS YP_003373605.1 283782851 8709121 complement(382036..383664) 1 NC_013721.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00711; drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein 383664 8709121 HMPREF0424_0354 Gardnerella vaginalis 409-05 drug resistance MFS transporter, drug:H+ antiporter-2 (14 Spanner) (DHA2) family protein YP_003373605.1 382036 R 553190 CDS YP_003373606.1 283782852 8708754 complement(383828..384814) 1 NC_013721.1 identified by match to protein family HMM PF07501; G5 domain-containing protein 384814 8708754 HMPREF0424_0355 Gardnerella vaginalis 409-05 G5 domain-containing protein YP_003373606.1 383828 R 553190 CDS YP_003373607.1 283782853 8709461 complement(384963..385304) 1 NC_013721.1 identified by match to protein family HMM PF00085; match to protein family HMM TIGR01068; thioredoxin 385304 trxA 8709461 trxA Gardnerella vaginalis 409-05 thioredoxin YP_003373607.1 384963 R 553190 CDS YP_003373608.1 283782854 8709281 385411..386697 1 NC_013721.1 identified by match to protein family HMM PF00587; match to protein family HMM PF02403; match to protein family HMM TIGR00414; serine--tRNA ligase 386697 serS 8709281 serS Gardnerella vaginalis 409-05 serine--tRNA ligase YP_003373608.1 385411 D 553190 CDS YP_003373609.1 283782855 8710053 complement(387350..388663) 1 NC_013721.1 identified by match to protein family HMM PF08540; hydroxymethylglutaryl-CoA synthase 388663 8710053 HMPREF0424_0359 Gardnerella vaginalis 409-05 hydroxymethylglutaryl-CoA synthase YP_003373609.1 387350 R 553190 CDS YP_003373610.1 283782856 8709159 388578..388730 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 388730 8709159 HMPREF0424_0361 Gardnerella vaginalis 409-05 hypothetical protein YP_003373610.1 388578 D 553190 CDS YP_003373611.1 283782857 8709089 complement(388687..390021) 1 NC_013721.1 identified by match to protein family HMM TIGR00532; hydroxymethylglutaryl-CoA reductase, degradative 390021 8709089 HMPREF0424_0360 Gardnerella vaginalis 409-05 hydroxymethylglutaryl-CoA reductase, degradative YP_003373611.1 388687 R 553190 CDS YP_003373612.1 283782858 8709275 complement(390108..391370) 1 NC_013721.1 identified by match to protein family HMM PF00108; match to protein family HMM PF02803; match to protein family HMM TIGR01930; acetyl-CoA C-acetyltransferase 391370 8709275 HMPREF0424_0362 Gardnerella vaginalis 409-05 acetyl-CoA C-acetyltransferase YP_003373612.1 390108 R 553190 CDS YP_003373613.1 283782859 8709962 392005..392142 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 392142 8709962 HMPREF0424_0363 Gardnerella vaginalis 409-05 hypothetical protein YP_003373613.1 392005 D 553190 CDS YP_003373614.1 283782860 8709008 complement(392431..393012) 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01744; xanthine phosphoribosyltransferase 393012 xpt 8709008 xpt Gardnerella vaginalis 409-05 xanthine phosphoribosyltransferase YP_003373614.1 392431 R 553190 CDS YP_003373615.1 283782861 8709855 393202..396273 1 NC_013721.1 identified by match to protein family HMM PF00580; ATP-dependent DNA helicase PcrA 396273 8709855 HMPREF0424_0365 Gardnerella vaginalis 409-05 ATP-dependent DNA helicase PcrA YP_003373615.1 393202 D 553190 CDS YP_003373616.1 283782862 8709625 396416..396829 1 NC_013721.1 hypothetical protein 396829 8709625 HMPREF0424_0366 Gardnerella vaginalis 409-05 hypothetical protein YP_003373616.1 396416 D 553190 CDS YP_003373617.1 283782863 8709005 396868..398079 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 398079 8709005 HMPREF0424_0367 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003373617.1 396868 D 553190 CDS YP_003373618.1 283782864 8709465 398082..398864 1 NC_013721.1 identified by match to protein family HMM PF00005; lipoprotein releasing system, ATP-binding protein 398864 8709465 HMPREF0424_0368 Gardnerella vaginalis 409-05 lipoprotein releasing system, ATP-binding protein YP_003373618.1 398082 D 553190 CDS YP_003373619.1 283782865 8708755 399301..399927 1 NC_013721.1 identified by match to protein family HMM PF00163; match to protein family HMM PF01479; match to protein family HMM TIGR01017; 30S ribosomal protein S4 399927 rpsD 8708755 rpsD Gardnerella vaginalis 409-05 30S ribosomal protein S4 YP_003373619.1 399301 D 553190 CDS YP_003373620.1 283782866 8709799 399959..400072 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 400072 8709799 HMPREF0424_0370 Gardnerella vaginalis 409-05 hypothetical protein YP_003373620.1 399959 D 553190 CDS YP_003373621.1 283782867 8709579 400120..400794 1 NC_013721.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 400794 8709579 HMPREF0424_0371 Gardnerella vaginalis 409-05 phosphoglycerate mutase family protein YP_003373621.1 400120 D 553190 CDS YP_003373622.1 283782868 8709576 400945..401391 1 NC_013721.1 hypothetical protein 401391 8709576 HMPREF0424_0372 Gardnerella vaginalis 409-05 hypothetical protein YP_003373622.1 400945 D 553190 CDS YP_003373623.1 283782869 8709018 401391..401636 1 NC_013721.1 hypothetical protein 401636 8709018 HMPREF0424_0373 Gardnerella vaginalis 409-05 hypothetical protein YP_003373623.1 401391 D 553190 CDS YP_003373624.1 283782870 8709105 complement(401653..401766) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 401766 8709105 HMPREF0424_0374 Gardnerella vaginalis 409-05 hypothetical protein YP_003373624.1 401653 R 553190 CDS YP_003373625.1 283782871 8709793 401843..404527 1 NC_013721.1 identified by match to protein family HMM PF01411; match to protein family HMM PF02272; match to protein family HMM PF07973; match to protein family HMM TIGR00344; alanine--tRNA ligase 404527 alaS 8709793 alaS Gardnerella vaginalis 409-05 alanine--tRNA ligase YP_003373625.1 401843 D 553190 CDS YP_003373626.1 283782872 8709787 404582..405040 1 NC_013721.1 identified by match to protein family HMM PF03652; match to protein family HMM TIGR00250; RNAse YqgF 405040 8709787 HMPREF0424_0376 Gardnerella vaginalis 409-05 RNAse YqgF YP_003373626.1 404582 D 553190 CDS YP_003373627.1 283782873 8709232 405086..406276 1 NC_013721.1 identified by match to protein family HMM PF02618; match to protein family HMM TIGR00247; hypothetical protein 406276 8709232 HMPREF0424_0377 Gardnerella vaginalis 409-05 hypothetical protein YP_003373627.1 405086 D 553190 CDS YP_003373628.1 283782874 8709458 406449..406865 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 406865 8709458 HMPREF0424_0378 Gardnerella vaginalis 409-05 hypothetical protein YP_003373628.1 406449 D 553190 CDS YP_003373629.1 283782875 8708746 406915..408102 1 NC_013721.1 identified by match to protein family HMM PF01264; match to protein family HMM TIGR00033; chorismate synthase 408102 aroC 8708746 aroC Gardnerella vaginalis 409-05 chorismate synthase YP_003373629.1 406915 D 553190 CDS YP_003373630.1 283782876 8708763 408099..409781 1 NC_013721.1 identified by match to protein family HMM PF01202; match to protein family HMM PF01761; match to protein family HMM TIGR01357; 3-dehydroquinate synthase 409781 aroB 8708763 aroB Gardnerella vaginalis 409-05 3-dehydroquinate synthase YP_003373630.1 408099 D 553190 CDS YP_003373631.1 283782877 8708797 409801..410256 1 NC_013721.1 identified by match to protein family HMM PF01220; match to protein family HMM TIGR01088; 3-dehydroquinate dehydratase 410256 aroQ 8708797 aroQ Gardnerella vaginalis 409-05 3-dehydroquinate dehydratase YP_003373631.1 409801 D 553190 CDS YP_003373632.1 283782878 8708762 410319..412001 1 NC_013721.1 identified by match to protein family HMM PF00117; match to protein family HMM PF06418; match to protein family HMM TIGR00337; CTP synthase 412001 pyrG 8708762 pyrG Gardnerella vaginalis 409-05 CTP synthase YP_003373632.1 410319 D 553190 CDS YP_003373633.1 283782879 8709327 412214..413872 1 NC_013721.1 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01980; FeS assembly protein SufB 413872 sufB 8709327 sufB Gardnerella vaginalis 409-05 FeS assembly protein SufB YP_003373633.1 412214 D 553190 CDS YP_003373634.1 283782880 8709883 413872..415119 1 NC_013721.1 identified by match to protein family HMM PF01458; match to protein family HMM TIGR01981; FeS assembly protein SufD 415119 sufD 8709883 sufD Gardnerella vaginalis 409-05 FeS assembly protein SufD YP_003373634.1 413872 D 553190 CDS YP_003373635.1 283782881 8709141 415129..415905 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR01978; FeS assembly ATPase SufC 415905 sufC 8709141 sufC Gardnerella vaginalis 409-05 FeS assembly ATPase SufC YP_003373635.1 415129 D 553190 CDS YP_003373636.1 283782882 8709207 415982..417340 1 NC_013721.1 identified by match to protein family HMM PF00266; match to protein family HMM TIGR01979; cysteine desulfurase, SufS family protein 417340 sufS 8709207 sufS Gardnerella vaginalis 409-05 cysteine desulfurase, SufS family protein YP_003373636.1 415982 D 553190 CDS YP_003373637.1 283782883 8709907 417427..418128 1 NC_013721.1 identified by match to protein family HMM PF01592; match to protein family HMM TIGR01994; NifU family SUF system FeS assembly protein 418128 8709907 HMPREF0424_0387 Gardnerella vaginalis 409-05 NifU family SUF system FeS assembly protein YP_003373637.1 417427 D 553190 CDS YP_003373638.1 283782884 8709363 418161..418634 1 NC_013721.1 identified by match to protein family HMM PF01883; hypothetical protein 418634 8709363 HMPREF0424_0388 Gardnerella vaginalis 409-05 hypothetical protein YP_003373638.1 418161 D 553190 CDS YP_003373639.1 283782885 8708814 418683..419378 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 419378 8708814 HMPREF0424_0390 Gardnerella vaginalis 409-05 hypothetical protein YP_003373639.1 418683 D 553190 CDS YP_003373640.1 283782886 8709019 complement(419375..420040) 1 NC_013721.1 hypothetical protein 420040 8709019 HMPREF0424_0389 Gardnerella vaginalis 409-05 hypothetical protein YP_003373640.1 419375 R 553190 CDS YP_003373641.1 283782887 8708851 complement(420040..422046) 1 NC_013721.1 identified by match to protein family HMM PF00515; match to protein family HMM PF07719; hypothetical protein 422046 8708851 HMPREF0424_0391 Gardnerella vaginalis 409-05 hypothetical protein YP_003373641.1 420040 R 553190 CDS YP_003373642.1 283782888 8710062 422568..424265 1 NC_013721.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM TIGR00499; lysine--tRNA ligase 424265 lysS 8710062 lysS Gardnerella vaginalis 409-05 lysine--tRNA ligase YP_003373642.1 422568 D 553190 CDS YP_003373643.1 283782889 8708870 424421..425161 1 NC_013721.1 identified by match to protein family HMM PF00300; match to protein family HMM TIGR01258; phosphoglycerate mutase 425161 8708870 HMPREF0424_0394 Gardnerella vaginalis 409-05 phosphoglycerate mutase YP_003373643.1 424421 D 553190 CDS YP_003373644.1 283782890 8709583 complement(425317..425997) 1 NC_013721.1 identified by match to protein family HMM PF01895; match to protein family HMM TIGR02135; phosphate transport system regulatory protein PhoU 425997 phoU 8709583 phoU Gardnerella vaginalis 409-05 phosphate transport system regulatory protein PhoU YP_003373644.1 425317 R 553190 CDS YP_003373645.1 283782891 8709434 426187..427455 1 NC_013721.1 identified by match to protein family HMM PF02518; histidine kinase 427455 8709434 HMPREF0424_0396 Gardnerella vaginalis 409-05 histidine kinase YP_003373645.1 426187 D 553190 CDS YP_003373646.1 283782892 8708876 complement(427514..427780) 1 NC_013721.1 hypothetical protein 427780 8708876 HMPREF0424_0397 Gardnerella vaginalis 409-05 hypothetical protein YP_003373646.1 427514 R 553190 CDS YP_003373647.1 283782893 8709924 427966..429111 1 NC_013721.1 identified by match to protein family HMM PF05257; CHAP domain-containing protein 429111 8709924 HMPREF0424_0398 Gardnerella vaginalis 409-05 CHAP domain-containing protein YP_003373647.1 427966 D 553190 CDS YP_003373648.1 283782894 8709347 429225..429947 1 NC_013721.1 identified by match to protein family HMM PF00877; NlpC/P60 family protein 429947 8709347 HMPREF0424_0399 Gardnerella vaginalis 409-05 NlpC/P60 family protein YP_003373648.1 429225 D 553190 CDS YP_003373649.1 283782895 8709106 430089..431114 1 NC_013721.1 identified by match to protein family HMM PF00582; universal stress family protein 431114 8709106 HMPREF0424_0400 Gardnerella vaginalis 409-05 universal stress family protein YP_003373649.1 430089 D 553190 CDS YP_003373650.1 283782896 8709915 431536..431688 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 431688 8709915 HMPREF0424_0401 Gardnerella vaginalis 409-05 hypothetical protein YP_003373650.1 431536 D 553190 CDS YP_003373651.1 283782897 8708961 complement(431803..433134) 1 NC_013721.1 identified by match to protein family HMM PF00534; glycosyltransferase 433134 8708961 HMPREF0424_0402 Gardnerella vaginalis 409-05 glycosyltransferase YP_003373651.1 431803 R 553190 CDS YP_003373652.1 283782898 8709778 complement(433227..433646) 1 NC_013721.1 identified by match to protein family HMM PF02566; OsmC-like protein 433646 8709778 HMPREF0424_0403 Gardnerella vaginalis 409-05 OsmC-like protein YP_003373652.1 433227 R 553190 CDS YP_003373653.1 283782899 8709043 433798..434670 1 NC_013721.1 identified by match to protein family HMM PF00303; match to protein family HMM TIGR03284; thymidylate synthase 434670 thyA 8709043 thyA Gardnerella vaginalis 409-05 thymidylate synthase YP_003373653.1 433798 D 553190 CDS YP_003373654.1 283782900 8709567 434731..435390 1 NC_013721.1 identified by match to protein family HMM PF00186; dihydrofolate reductase 435390 folA 8709567 folA Gardnerella vaginalis 409-05 dihydrofolate reductase YP_003373654.1 434731 D 553190 CDS YP_003373655.1 283782901 8708910 435437..435991 1 NC_013721.1 identified by match to protein family HMM PF01451; low molecular weight phosphotyrosine protein phosphatase 435991 8708910 HMPREF0424_0406 Gardnerella vaginalis 409-05 low molecular weight phosphotyrosine protein phosphatase YP_003373655.1 435437 D 553190 CDS YP_003373656.1 283782902 8709428 436006..436194 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 436194 8709428 HMPREF0424_0407 Gardnerella vaginalis 409-05 hypothetical protein YP_003373656.1 436006 D 553190 CDS YP_003373657.1 283782903 8709334 436260..437627 1 NC_013721.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; peptidase dimerization domain-containing protein 437627 8709334 HMPREF0424_0408 Gardnerella vaginalis 409-05 peptidase dimerization domain-containing protein YP_003373657.1 436260 D 553190 CDS YP_003373658.1 283782904 8709906 437836..438474 1 NC_013721.1 hypothetical protein 438474 8709906 HMPREF0424_0409 Gardnerella vaginalis 409-05 hypothetical protein YP_003373658.1 437836 D 553190 CDS YP_003373659.1 283782905 8709598 438604..439437 1 NC_013721.1 hypothetical protein 439437 8709598 HMPREF0424_0410 Gardnerella vaginalis 409-05 hypothetical protein YP_003373659.1 438604 D 553190 CDS YP_003373660.1 283782906 8709049 439880..440488 1 NC_013721.1 integral membrane family protein 440488 8709049 HMPREF0424_0412 Gardnerella vaginalis 409-05 integral membrane family protein YP_003373660.1 439880 D 553190 CDS YP_003373661.1 283782907 8709800 440543..443230 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt transport protein 443230 8709800 HMPREF0424_0414 Gardnerella vaginalis 409-05 cobalt transport protein YP_003373661.1 440543 D 553190 CDS YP_003373662.1 283782908 8709457 complement(443194..443343) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 443343 8709457 HMPREF0424_0413 Gardnerella vaginalis 409-05 hypothetical protein YP_003373662.1 443194 R 553190 CDS YP_003373663.1 283782909 8710044 444149..445162 1 NC_013721.1 identified by match to protein family HMM PF07751; Abi family protein 445162 8710044 HMPREF0424_0416 Gardnerella vaginalis 409-05 Abi family protein YP_003373663.1 444149 D 553190 CDS YP_003373664.1 283782910 8708759 445334..445468 1 NC_013721.1 hypothetical protein 445468 8708759 HMPREF0424_0417 Gardnerella vaginalis 409-05 hypothetical protein YP_003373664.1 445334 D 553190 CDS YP_003373665.1 283782911 8709648 445896..451943 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 451943 8709648 HMPREF0424_0418 Gardnerella vaginalis 409-05 hypothetical protein YP_003373665.1 445896 D 553190 CDS YP_003373666.1 283782912 8708984 451986..452141 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 452141 8708984 HMPREF0424_0419 Gardnerella vaginalis 409-05 hypothetical protein YP_003373666.1 451986 D 553190 CDS YP_003373667.1 283782913 8709656 452203..453861 1 NC_013721.1 identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 453861 8709656 HMPREF0424_0420 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003373667.1 452203 D 553190 CDS YP_003373668.1 283782914 8709633 453907..454029 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 454029 8709633 HMPREF0424_0421 Gardnerella vaginalis 409-05 hypothetical protein YP_003373668.1 453907 D 553190 CDS YP_003373669.1 283782915 8708777 454072..455217 1 NC_013721.1 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 455217 8708777 HMPREF0424_0422 Gardnerella vaginalis 409-05 sortase family protein YP_003373669.1 454072 D 553190 CDS YP_003373670.1 283782916 8709948 456120..462248 1 NC_013721.1 identified by match to protein family HMM PF00082; match to protein family HMM PF02225; match to protein family HMM PF06280; PA domain-containing protein 462248 8709948 HMPREF0424_0423 Gardnerella vaginalis 409-05 PA domain-containing protein YP_003373670.1 456120 D 553190 CDS YP_003373671.1 283782917 8709234 complement(462305..462430) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 462430 8709234 HMPREF0424_0424 Gardnerella vaginalis 409-05 hypothetical protein YP_003373671.1 462305 R 553190 CDS YP_003373672.1 283782918 8709814 462642..465593 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 465593 8709814 HMPREF0424_0425 Gardnerella vaginalis 409-05 hypothetical protein YP_003373672.1 462642 D 553190 CDS YP_003373673.1 283782919 8709117 465590..467326 1 NC_013721.1 identified by match to protein family HMM PF00746; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 467326 8709117 HMPREF0424_0426 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003373673.1 465590 D 553190 CDS YP_003373674.1 283782920 8709078 467417..468514 1 NC_013721.1 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 468514 8709078 HMPREF0424_0427 Gardnerella vaginalis 409-05 sortase family protein YP_003373674.1 467417 D 553190 CDS YP_003373675.1 283782921 8710051 469422..470897 1 NC_013721.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02601; match to protein family HMM TIGR00237; exodeoxyribonuclease VII large subunit 470897 xseA 8710051 xseA Gardnerella vaginalis 409-05 exodeoxyribonuclease VII large subunit YP_003373675.1 469422 D 553190 CDS YP_003373676.1 283782922 8709491 470946..471266 1 NC_013721.1 identified by match to protein family HMM PF02609; exodeoxyribonuclease VII small subunit 471266 xseB 8709491 xseB Gardnerella vaginalis 409-05 exodeoxyribonuclease VII small subunit YP_003373676.1 470946 D 553190 CDS YP_003373677.1 283782923 8710036 471585..472667 1 NC_013721.1 identified by match to protein family HMM PF07751; Abi family protein 472667 8710036 HMPREF0424_0432 Gardnerella vaginalis 409-05 Abi family protein YP_003373677.1 471585 D 553190 CDS YP_003373678.1 283782924 8709307 473014..476424 1 NC_013721.1 identified by match to protein family HMM PF00133; match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00392; isoleucine--tRNA ligase 476424 ileS 8709307 ileS Gardnerella vaginalis 409-05 isoleucine--tRNA ligase YP_003373678.1 473014 D 553190 CDS YP_003373679.1 283782925 8709508 complement(476500..476763) 1 NC_013721.1 toxin-antitoxin system, antitoxin component 476763 8709508 HMPREF0424_0434 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component YP_003373679.1 476500 R 553190 CDS YP_003373680.1 283782926 8708792 complement(476741..477016) 1 NC_013721.1 identified by match to protein family HMM PF04365; toxin-antitoxin system, toxin component 477016 8708792 HMPREF0424_0435 Gardnerella vaginalis 409-05 toxin-antitoxin system, toxin component YP_003373680.1 476741 R 553190 CDS YP_003373681.1 283782927 8709630 477356..478285 1 NC_013721.1 identified by match to protein family HMM PF00528; oligopeptide ABC transporter, permease protein OppC 478285 8709630 HMPREF0424_0436 Gardnerella vaginalis 409-05 oligopeptide ABC transporter, permease protein OppC YP_003373681.1 477356 D 553190 CDS YP_003373682.1 283782928 8708993 478282..479478 1 NC_013721.1 identified by match to protein family HMM PF00528; dipeptide ABC transporter, permease protein DppB 479478 8708993 HMPREF0424_0437 Gardnerella vaginalis 409-05 dipeptide ABC transporter, permease protein DppB YP_003373682.1 478282 D 553190 CDS YP_003373683.1 283782929 8709095 479652..481361 1 NC_013721.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 481361 8709095 HMPREF0424_0438 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003373683.1 479652 D 553190 CDS YP_003373684.1 283782930 8709685 481368..483029 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; ABC transporter ATP-binding protein 483029 8709685 HMPREF0424_0439 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373684.1 481368 D 553190 CDS YP_003373685.1 283782931 8709263 483092..483862 1 NC_013721.1 identified by match to protein family HMM PF01177; match to protein family HMM TIGR00067; glutamate racemase 483862 murI 8709263 murI Gardnerella vaginalis 409-05 glutamate racemase YP_003373685.1 483092 D 553190 CDS YP_003373686.1 283782932 8709785 complement(483903..484553) 1 NC_013721.1 identified by match to protein family HMM PF07884; vitamin K epoxide reductase family protein 484553 8709785 HMPREF0424_0441 Gardnerella vaginalis 409-05 vitamin K epoxide reductase family protein YP_003373686.1 483903 R 553190 CDS YP_003373687.1 283782933 8708793 484621..485586 1 NC_013721.1 identified by match to protein family HMM PF02811; PHP domain-containing protein 485586 8708793 HMPREF0424_0442 Gardnerella vaginalis 409-05 PHP domain-containing protein YP_003373687.1 484621 D 553190 CDS YP_003373688.1 283782934 8710011 complement(485648..485866) 1 NC_013721.1 hypothetical protein 485866 8710011 HMPREF0424_0443 Gardnerella vaginalis 409-05 hypothetical protein YP_003373688.1 485648 R 553190 CDS YP_003373689.1 283782935 8709790 complement(485930..487726) 1 NC_013721.1 hypothetical protein 487726 8709790 HMPREF0424_0444 Gardnerella vaginalis 409-05 hypothetical protein YP_003373689.1 485930 R 553190 CDS YP_003373690.1 283782936 8709086 487816..489363 1 NC_013721.1 identified by match to protein family HMM PF00580; UvrD/REP helicase 489363 8709086 HMPREF0424_0445 Gardnerella vaginalis 409-05 UvrD/REP helicase YP_003373690.1 487816 D 553190 CDS YP_003373691.1 283782937 8709060 complement(489518..491296) 1 NC_013721.1 identified by match to protein family HMM TIGR03624; hydrolase 491296 8709060 HMPREF0424_0446 Gardnerella vaginalis 409-05 hydrolase YP_003373691.1 489518 R 553190 CDS YP_003373692.1 283782938 8709616 491557..492444 1 NC_013721.1 PDZ domain family protein 492444 8709616 HMPREF0424_0447 Gardnerella vaginalis 409-05 PDZ domain family protein YP_003373692.1 491557 D 553190 CDS YP_003373693.1 283782939 8710038 492681..494192 1 NC_013721.1 identified by match to protein family HMM TIGR03543; match to protein family HMM TIGR03544; DivIVA domain repeat-containing protein 494192 8710038 HMPREF0424_0449 Gardnerella vaginalis 409-05 DivIVA domain repeat-containing protein YP_003373693.1 492681 D 553190 CDS YP_003373694.1 283782940 8709076 494224..494970 1 NC_013721.1 identified by match to protein family HMM PF02565; match to protein family HMM TIGR00613; DNA repair protein RecO 494970 recO 8709076 recO Gardnerella vaginalis 409-05 DNA repair protein RecO YP_003373694.1 494224 D 553190 CDS YP_003373695.1 283782941 8709968 494973..495767 1 NC_013721.1 identified by match to protein family HMM PF01255; match to protein family HMM TIGR00055; di-trans,poly-cis-decaprenylcistransferase 495767 uppS 8709968 uppS Gardnerella vaginalis 409-05 di-trans,poly-cis-decaprenylcistransferase YP_003373695.1 494973 D 553190 CDS YP_003373696.1 283782942 8708881 complement(495785..497017) 1 NC_013721.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01891; amidohydrolase 497017 8708881 HMPREF0424_0452 Gardnerella vaginalis 409-05 amidohydrolase YP_003373696.1 495785 R 553190 CDS YP_003373697.1 283782943 8709174 complement(497092..497457) 1 NC_013721.1 identified by match to protein family HMM PF01910; match to protein family HMM TIGR00106; hypothetical protein 497457 8709174 HMPREF0424_0453 Gardnerella vaginalis 409-05 hypothetical protein YP_003373697.1 497092 R 553190 CDS YP_003373698.1 283782944 8709749 497638..499158 1 NC_013721.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00389; glycine--tRNA ligase 499158 glyS 8709749 glyS Gardnerella vaginalis 409-05 glycine--tRNA ligase YP_003373698.1 497638 D 553190 CDS YP_003373699.1 283782945 8709208 499243..500397 1 NC_013721.1 identified by match to protein family HMM PF01207; match to protein family HMM TIGR00737; nifR3 family TIM-barrel protein 500397 8709208 HMPREF0424_0455 Gardnerella vaginalis 409-05 nifR3 family TIM-barrel protein YP_003373699.1 499243 D 553190 CDS YP_003373700.1 283782946 8709718 500600..501814 1 NC_013721.1 identified by match to protein family HMM PF00091; match to protein family HMM PF03953; match to protein family HMM TIGR00065; cell division protein FtsZ 501814 ftsZ 8709718 ftsZ Gardnerella vaginalis 409-05 cell division protein FtsZ YP_003373700.1 500600 D 553190 CDS YP_003373701.1 283782947 8709348 501839..502297 1 NC_013721.1 identified by match to protein family HMM PF04472; cell division family protein 502297 8709348 HMPREF0424_0457 Gardnerella vaginalis 409-05 cell division family protein YP_003373701.1 501839 D 553190 CDS YP_003373702.1 283782948 8709873 502456..503274 1 NC_013721.1 identified by match to protein family HMM PF02390; match to protein family HMM TIGR00091; tRNA (guanine-N(7)-)-methyltransferase 503274 trmB 8709873 trmB Gardnerella vaginalis 409-05 tRNA (guanine-N(7)-)-methyltransferase YP_003373702.1 502456 D 553190 CDS YP_003373703.1 283782949 8710075 503637..504431 1 NC_013721.1 hypothetical protein 504431 8710075 HMPREF0424_0460 Gardnerella vaginalis 409-05 hypothetical protein YP_003373703.1 503637 D 553190 CDS YP_003373704.1 283782950 8710060 complement(504699..505601) 1 NC_013721.1 identified by match to protein family HMM PF00294; kinase, PfkB family 505601 8710060 HMPREF0424_0462 Gardnerella vaginalis 409-05 kinase, PfkB family YP_003373704.1 504699 R 553190 CDS YP_003373705.1 283782951 8709594 complement(505887..507482) 1 NC_013721.1 identified by match to protein family HMM PF00557; M24 family peptidase 507482 8709594 HMPREF0424_0463 Gardnerella vaginalis 409-05 M24 family peptidase YP_003373705.1 505887 R 553190 CDS YP_003373706.1 283782952 8708963 507761..509218 1 NC_013721.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01499; bifunctional protein folylpolyglutamate synthase/dihydrofolate synthase 509218 folC 8708963 folC Gardnerella vaginalis 409-05 bifunctional protein folylpolyglutamate synthase/dihydrofolate synthase YP_003373706.1 507761 D 553190 CDS YP_003373707.1 283782953 8709674 complement(509236..509964) 1 NC_013721.1 identified by match to protein family HMM PF01177; match to protein family HMM TIGR00035; aspartate racemase 509964 8709674 HMPREF0424_0465 Gardnerella vaginalis 409-05 aspartate racemase YP_003373707.1 509236 R 553190 CDS YP_003373708.1 283782954 8709155 complement(510000..511241) 1 NC_013721.1 hypothetical protein 511241 8709155 HMPREF0424_0466 Gardnerella vaginalis 409-05 hypothetical protein YP_003373708.1 510000 R 553190 CDS YP_003373709.1 283782955 8709146 complement(511376..513175) 1 NC_013721.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 513175 murE 8709146 murE Gardnerella vaginalis 409-05 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_003373709.1 511376 R 553190 CDS YP_003373710.1 283782956 8709676 complement(513207..513986) 1 NC_013721.1 identified by match to protein family HMM PF00929; exonuclease 513986 8709676 HMPREF0424_0468 Gardnerella vaginalis 409-05 exonuclease YP_003373710.1 513207 R 553190 CDS YP_003373711.1 283782957 8709001 514136..514813 1 NC_013721.1 identified by match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM PF08281; match to protein family HMM TIGR02937; sigma-70 region 2 514813 8709001 HMPREF0424_0469 Gardnerella vaginalis 409-05 sigma-70 region 2 YP_003373711.1 514136 D 553190 CDS YP_003373712.1 283782958 8709494 complement(515094..515594) 1 NC_013721.1 identified by match to protein family HMM PF04073; match to protein family HMM TIGR00011; hypothetical protein 515594 ybaK 8709494 ybaK Gardnerella vaginalis 409-05 hypothetical protein YP_003373712.1 515094 R 553190 CDS YP_003373713.1 283782959 8709543 complement(515773..516861) 1 NC_013721.1 identified by match to protein family HMM PF02800; glyceraldehyde 3-phosphate dehydrogenase domain-containing protein 516861 8709543 HMPREF0424_0471 Gardnerella vaginalis 409-05 glyceraldehyde 3-phosphate dehydrogenase domain-containing protein YP_003373713.1 515773 R 553190 CDS YP_003373714.1 283782960 8708837 complement(517199..518017) 1 NC_013721.1 identified by match to protein family HMM PF04263; match to protein family HMM TIGR01378; thiamine diphosphokinase 518017 8708837 HMPREF0424_0473 Gardnerella vaginalis 409-05 thiamine diphosphokinase YP_003373714.1 517199 R 553190 CDS YP_003373715.1 283782961 8709606 518296..520182 1 NC_013721.1 identified by match to protein family HMM PF00310; match to protein family HMM PF00733; match to protein family HMM TIGR01536; asparagine synthase 520182 asnB 8709606 asnB Gardnerella vaginalis 409-05 asparagine synthase YP_003373715.1 518296 D 553190 CDS YP_003373716.1 283782962 8709072 520413..521174 1 NC_013721.1 identified by match to protein family HMM PF00707; match to protein family HMM PF05198; match to protein family HMM TIGR00168; translation initiation factor IF-3 521174 infC 8709072 infC Gardnerella vaginalis 409-05 translation initiation factor IF-3 YP_003373716.1 520413 D 553190 CDS YP_003373717.1 283782963 8709091 521155..521349 1 NC_013721.1 identified by match to protein family HMM PF01632; match to protein family HMM TIGR00001; 50S ribosomal protein L35 521349 rpmI 8709091 rpmI Gardnerella vaginalis 409-05 50S ribosomal protein L35 YP_003373717.1 521155 D 553190 CDS YP_003373718.1 283782964 8709156 521417..521800 1 NC_013721.1 identified by match to protein family HMM PF00453; match to protein family HMM TIGR01032; 50S ribosomal protein L20 521800 rplT 8709156 rplT Gardnerella vaginalis 409-05 50S ribosomal protein L20 YP_003373718.1 521417 D 553190 CDS YP_003373719.1 283782965 8709859 521895..522854 1 NC_013721.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; match to protein family HMM TIGR02225; tyrosine recombinase XerD 522854 xerD 8709859 xerD Gardnerella vaginalis 409-05 tyrosine recombinase XerD YP_003373719.1 521895 D 553190 CDS YP_003373720.1 283782966 8708813 522903..523742 1 NC_013721.1 identified by match to protein family HMM PF01656; sporulation initiation inhibitor protein Soj 523742 8708813 HMPREF0424_0479 Gardnerella vaginalis 409-05 sporulation initiation inhibitor protein Soj YP_003373720.1 522903 D 553190 CDS YP_003373721.1 283782967 8710019 523933..525858 1 NC_013721.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF01926; match to protein family HMM PF03144; match to protein family HMM TIGR00231; match to protein family HMM TIGR01394; GTP-binding protein TypA 525858 typA 8710019 typA Gardnerella vaginalis 409-05 GTP-binding protein TypA YP_003373721.1 523933 D 553190 CDS YP_003373722.1 283782968 8709510 525983..526309 1 NC_013721.1 hypothetical protein 526309 8709510 HMPREF0424_0481 Gardnerella vaginalis 409-05 hypothetical protein YP_003373722.1 525983 D 553190 CDS YP_003373723.1 283782969 8708788 526447..527442 1 NC_013721.1 identified by match to protein family HMM PF00800; prephenate dehydratase 527442 8708788 HMPREF0424_0482 Gardnerella vaginalis 409-05 prephenate dehydratase YP_003373723.1 526447 D 553190 CDS YP_003373724.1 283782970 8709101 527436..528521 1 NC_013721.1 identified by match to protein family HMM PF02153; match to protein family HMM PF03446; prephenate dehydrogenase 528521 8709101 HMPREF0424_0483 Gardnerella vaginalis 409-05 prephenate dehydrogenase YP_003373724.1 527436 D 553190 CDS YP_003373725.1 283782971 8709099 complement(528545..528838) 1 NC_013721.1 hypothetical protein 528838 8709099 HMPREF0424_0484 Gardnerella vaginalis 409-05 hypothetical protein YP_003373725.1 528545 R 553190 CDS YP_003373726.1 283782972 8709539 528924..529892 1 NC_013721.1 identified by match to protein family HMM PF00589; match to protein family HMM PF02899; site-specific tyrosine recombinase XerC 529892 xerC 8709539 xerC Gardnerella vaginalis 409-05 site-specific tyrosine recombinase XerC YP_003373726.1 528924 D 553190 CDS YP_003373727.1 283782973 8708938 530279..531907 1 NC_013721.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 531907 8708938 HMPREF0424_0486 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003373727.1 530279 D 553190 CDS YP_003373728.1 283782974 8708825 532109..533035 1 NC_013721.1 identified by match to protein family HMM PF00528; dipeptide ABC transporter, permease protein DppB 533035 8708825 HMPREF0424_0487 Gardnerella vaginalis 409-05 dipeptide ABC transporter, permease protein DppB YP_003373728.1 532109 D 553190 CDS YP_003373729.1 283782975 8709522 533048..534040 1 NC_013721.1 identified by match to protein family HMM PF00528; oligopeptide ABC transporter, permease protein OppC 534040 8709522 HMPREF0424_0488 Gardnerella vaginalis 409-05 oligopeptide ABC transporter, permease protein OppC YP_003373729.1 533048 D 553190 CDS YP_003373730.1 283782976 8708810 534065..536089 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; phosphonate C-P lyase system protein PhnK 536089 8708810 HMPREF0424_0489 Gardnerella vaginalis 409-05 phosphonate C-P lyase system protein PhnK YP_003373730.1 534065 D 553190 CDS YP_003373731.1 283782977 8709362 536269..537135 1 NC_013721.1 identified by match to protein family HMM PF03372; match to protein family HMM TIGR00633; exodeoxyribonuclease III 537135 8709362 HMPREF0424_0490 Gardnerella vaginalis 409-05 exodeoxyribonuclease III YP_003373731.1 536269 D 553190 CDS YP_003373732.1 283782978 8708924 537315..538079 1 NC_013721.1 hypothetical protein 538079 8708924 HMPREF0424_0491 Gardnerella vaginalis 409-05 hypothetical protein YP_003373732.1 537315 D 553190 CDS YP_003373733.1 283782979 8709467 538104..538925 1 NC_013721.1 hypothetical protein 538925 8709467 HMPREF0424_0492 Gardnerella vaginalis 409-05 hypothetical protein YP_003373733.1 538104 D 553190 CDS YP_003373734.1 283782980 8709226 538963..540378 1 NC_013721.1 identified by match to protein family HMM PF05958; hypothetical protein 540378 8709226 HMPREF0424_0493 Gardnerella vaginalis 409-05 hypothetical protein YP_003373734.1 538963 D 553190 CDS YP_003373735.1 283782981 8709311 540703..541668 1 NC_013721.1 identified by match to protein family HMM PF00239; match to protein family HMM PF07508; resolvase domain-containing protein 541668 8709311 HMPREF0424_0494 Gardnerella vaginalis 409-05 resolvase domain-containing protein YP_003373735.1 540703 D 553190 CDS YP_003373736.1 283782982 8709624 541658..542302 1 NC_013721.1 hypothetical protein 542302 8709624 HMPREF0424_0495 Gardnerella vaginalis 409-05 hypothetical protein YP_003373736.1 541658 D 553190 CDS YP_003373737.1 283782983 8708785 542843..543121 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 543121 8708785 HMPREF0424_0496 Gardnerella vaginalis 409-05 hypothetical protein YP_003373737.1 542843 D 553190 CDS YP_003373738.1 283782984 8709139 543193..544764 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 544764 8709139 HMPREF0424_0497 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373738.1 543193 D 553190 CDS YP_003373739.1 283782985 8709852 545245..545679 1 NC_013721.1 cytidine/deoxycytidylate deaminase family protein 545679 8709852 HMPREF0424_0498 Gardnerella vaginalis 409-05 cytidine/deoxycytidylate deaminase family protein YP_003373739.1 545245 D 553190 CDS YP_003373740.1 283782986 8709286 545778..546722 1 NC_013721.1 hypothetical protein 546722 8709286 HMPREF0424_0499 Gardnerella vaginalis 409-05 hypothetical protein YP_003373740.1 545778 D 553190 CDS YP_003373741.1 283782987 8709989 547461..547754 1 NC_013721.1 hypothetical protein 547754 8709989 HMPREF0424_0500 Gardnerella vaginalis 409-05 hypothetical protein YP_003373741.1 547461 D 553190 CDS YP_003373742.1 283782988 8709261 547751..547924 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 547924 8709261 HMPREF0424_0501 Gardnerella vaginalis 409-05 hypothetical protein YP_003373742.1 547751 D 553190 CDS YP_003373743.1 283782989 8709471 548204..548665 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 548665 8709471 HMPREF0424_0502 Gardnerella vaginalis 409-05 hypothetical protein YP_003373743.1 548204 D 553190 CDS YP_003373744.1 283782990 8708743 548678..549229 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 549229 8708743 HMPREF0424_0503 Gardnerella vaginalis 409-05 hypothetical protein YP_003373744.1 548678 D 553190 CDS YP_003373745.1 283782991 8709942 549417..550070 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; LuxR family transcriptional regulator 550070 8709942 HMPREF0424_0504 Gardnerella vaginalis 409-05 LuxR family transcriptional regulator YP_003373745.1 549417 D 553190 CDS YP_003373746.1 283782992 8709379 550105..551277 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 551277 8709379 HMPREF0424_0505 Gardnerella vaginalis 409-05 hypothetical protein YP_003373746.1 550105 D 553190 CDS YP_003373747.1 283782993 8709705 551368..551583 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 551583 8709705 HMPREF0424_0506 Gardnerella vaginalis 409-05 hypothetical protein YP_003373747.1 551368 D 553190 CDS YP_003373748.1 283782994 8709577 551580..551849 1 NC_013721.1 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; RelB/DinJ family addiction module antitoxin 551849 8709577 HMPREF0424_0507 Gardnerella vaginalis 409-05 RelB/DinJ family addiction module antitoxin YP_003373748.1 551580 D 553190 CDS YP_003373749.1 283782995 8709031 551842..552117 1 NC_013721.1 identified by match to protein family HMM TIGR02385; toxin-antitoxin system, toxin component, RelE family 552117 8709031 HMPREF0424_0508 Gardnerella vaginalis 409-05 toxin-antitoxin system, toxin component, RelE family YP_003373749.1 551842 D 553190 CDS YP_003373750.1 283782996 8709723 complement(552238..552972) 1 NC_013721.1 identified by match to protein family HMM PF00665; transposase InsK for insertion sequence IS150 552972 8709723 HMPREF0424_0509 Gardnerella vaginalis 409-05 transposase InsK for insertion sequence IS150 YP_003373750.1 552238 R 553190 CDS YP_003373751.1 283782997 8709177 553742..554134 1 NC_013721.1 hypothetical protein 554134 8709177 HMPREF0424_0510 Gardnerella vaginalis 409-05 hypothetical protein YP_003373751.1 553742 D 553190 CDS YP_003373752.1 283782998 8709014 555423..556055 1 NC_013721.1 identified by match to protein family HMM PF01381; DNA-binding protein 556055 8709014 HMPREF0424_0511 Gardnerella vaginalis 409-05 DNA-binding protein YP_003373752.1 555423 D 553190 CDS YP_003373753.1 283782999 8708921 complement(556792..557046) 1 NC_013721.1 identified by match to protein family HMM TIGR01552; toxin-antitoxin system, antitoxin component, PHD family 557046 8708921 HMPREF0424_0512 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component, PHD family YP_003373753.1 556792 R 553190 CDS YP_003373754.1 283783000 8709374 557174..557320 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 557320 8709374 HMPREF0424_0513 Gardnerella vaginalis 409-05 hypothetical protein YP_003373754.1 557174 D 553190 CDS YP_003373755.1 283783001 8709914 557357..558343 1 NC_013721.1 identified by match to protein family HMM PF01381; DNA-binding protein 558343 8709914 HMPREF0424_0514 Gardnerella vaginalis 409-05 DNA-binding protein YP_003373755.1 557357 D 553190 CDS YP_003373756.1 283783002 8709212 558365..558601 1 NC_013721.1 hypothetical protein 558601 8709212 HMPREF0424_0515 Gardnerella vaginalis 409-05 hypothetical protein YP_003373756.1 558365 D 553190 CDS YP_003373757.1 283783003 8709533 complement(558850..559251) 1 NC_013721.1 hypothetical protein 559251 8709533 HMPREF0424_0516 Gardnerella vaginalis 409-05 hypothetical protein YP_003373757.1 558850 R 553190 CDS YP_003373758.1 283783004 8709006 complement(559248..559451) 1 NC_013721.1 identified by match to protein family HMM PF01381; DNA-binding protein 559451 8709006 HMPREF0424_0517 Gardnerella vaginalis 409-05 DNA-binding protein YP_003373758.1 559248 R 553190 CDS YP_003373759.1 283783005 8709679 559651..559947 1 NC_013721.1 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component 559947 8709679 HMPREF0424_0518 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component YP_003373759.1 559651 D 553190 CDS YP_003373760.1 283783006 8709754 559953..560069 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 560069 8709754 HMPREF0424_0519 Gardnerella vaginalis 409-05 hypothetical protein YP_003373760.1 559953 D 553190 CDS YP_003373761.1 283783007 8709163 560371..560943 1 NC_013721.1 lipoprotein 560943 8709163 HMPREF0424_0520 Gardnerella vaginalis 409-05 lipoprotein YP_003373761.1 560371 D 553190 CDS YP_003373762.1 283783008 8709939 561247..561378 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 561378 8709939 HMPREF0424_0521 Gardnerella vaginalis 409-05 hypothetical protein YP_003373762.1 561247 D 553190 CDS YP_003373763.1 283783009 8709442 561644..561946 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 561946 8709442 HMPREF0424_0522 Gardnerella vaginalis 409-05 hypothetical protein YP_003373763.1 561644 D 553190 CDS YP_003373764.1 283783010 8709063 562361..563467 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 563467 8709063 HMPREF0424_0523 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373764.1 562361 D 553190 CDS YP_003373765.1 283783011 8709068 563478..564257 1 NC_013721.1 hypothetical protein 564257 8709068 HMPREF0424_0524 Gardnerella vaginalis 409-05 hypothetical protein YP_003373765.1 563478 D 553190 CDS YP_003373766.1 283783012 8709448 564254..565192 1 NC_013721.1 identified by match to protein family HMM PF01061; ABC transporter 565192 8709448 HMPREF0424_0525 Gardnerella vaginalis 409-05 ABC transporter YP_003373766.1 564254 D 553190 CDS YP_003373767.1 283783013 8708912 565361..565489 1 NC_013721.1 hypothetical protein 565489 8708912 HMPREF0424_0526 Gardnerella vaginalis 409-05 hypothetical protein YP_003373767.1 565361 D 553190 CDS YP_003373768.1 283783014 8709910 566219..566431 1 NC_013721.1 hypothetical protein 566431 8709910 HMPREF0424_0527 Gardnerella vaginalis 409-05 hypothetical protein YP_003373768.1 566219 D 553190 CDS YP_003373769.1 283783015 8709941 566505..566996 1 NC_013721.1 hypothetical protein 566996 8709941 HMPREF0424_0528 Gardnerella vaginalis 409-05 hypothetical protein YP_003373769.1 566505 D 553190 CDS YP_003373770.1 283783016 8709383 567016..567645 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 567645 8709383 HMPREF0424_0529 Gardnerella vaginalis 409-05 hypothetical protein YP_003373770.1 567016 D 553190 CDS YP_003373771.1 283783017 8709775 568193..569491 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 569491 8709775 HMPREF0424_0530 Gardnerella vaginalis 409-05 hypothetical protein YP_003373771.1 568193 D 553190 CDS YP_003373772.1 283783018 8709228 569761..569940 1 NC_013721.1 hypothetical protein 569940 8709228 HMPREF0424_0531 Gardnerella vaginalis 409-05 hypothetical protein YP_003373772.1 569761 D 553190 CDS YP_003373773.1 283783019 8708844 570996..571181 1 NC_013721.1 identified by match to protein family HMM TIGR01764; excisionase family DNA binding domain 571181 8708844 HMPREF0424_0533 Gardnerella vaginalis 409-05 excisionase family DNA binding domain YP_003373773.1 570996 D 553190 CDS YP_003373774.1 283783020 8708916 571208..571927 1 NC_013721.1 identified by match to protein family HMM PF01555; DNA (cytosine-5-)-methyltransferase 571927 8708916 HMPREF0424_0534 Gardnerella vaginalis 409-05 DNA (cytosine-5-)-methyltransferase YP_003373774.1 571208 D 553190 CDS YP_003373775.1 283783021 8709841 571928..573001 1 NC_013721.1 identified by match to protein family HMM PF00145; match to protein family HMM TIGR00675; DNA (cytosine-5-)-methyltransferase 573001 dcm_2 8709841 dcm_2 Gardnerella vaginalis 409-05 DNA (cytosine-5-)-methyltransferase YP_003373775.1 571928 D 553190 CDS YP_003373776.1 283783022 8709317 572994..574955 1 NC_013721.1 identified by match to protein family HMM PF07728; ATPase family associated with various cellular activities (AAA) 574955 8709317 HMPREF0424_0536 Gardnerella vaginalis 409-05 ATPase family associated with various cellular activities (AAA) YP_003373776.1 572994 D 553190 CDS YP_003373777.1 283783023 8709133 574969..576345 1 NC_013721.1 LlaJI restriction endonuclease 576345 8709133 HMPREF0424_0537 Gardnerella vaginalis 409-05 LlaJI restriction endonuclease YP_003373777.1 574969 D 553190 CDS YP_003373778.1 283783024 8708854 577204..577344 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 577344 8708854 HMPREF0424_0539 Gardnerella vaginalis 409-05 hypothetical protein YP_003373778.1 577204 D 553190 CDS YP_003373779.1 283783025 8709677 577846..578583 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 578583 8709677 HMPREF0424_0540 Gardnerella vaginalis 409-05 hypothetical protein YP_003373779.1 577846 D 553190 CDS YP_003373780.1 283783026 8709943 578596..580161 1 NC_013721.1 identified by match to protein family HMM PF09479; match to protein family HMM TIGR01167; match to protein family HMM TIGR02543; hypothetical protein 580161 8709943 HMPREF0424_0541 Gardnerella vaginalis 409-05 hypothetical protein YP_003373780.1 578596 D 553190 CDS YP_003373781.1 283783027 8709385 581409..582671 1 NC_013721.1 identified by match to protein family HMM PF02624; YcaO-like protein 582671 8709385 HMPREF0424_0543 Gardnerella vaginalis 409-05 YcaO-like protein YP_003373781.1 581409 D 553190 CDS YP_003373782.1 283783028 8709933 582694..584007 1 NC_013721.1 hypothetical protein 584007 8709933 HMPREF0424_0544 Gardnerella vaginalis 409-05 hypothetical protein YP_003373782.1 582694 D 553190 CDS YP_003373783.1 283783029 8709365 584190..590279 1 NC_013721.1 identified by match to protein family HMM PF01468; match to protein family HMM PF07554; GA module 590279 8709365 HMPREF0424_0545 Gardnerella vaginalis 409-05 GA module YP_003373783.1 584190 D 553190 CDS YP_003373784.1 283783030 8709742 590404..590550 1 NC_013721.1 hypothetical protein 590550 8709742 HMPREF0424_0546 Gardnerella vaginalis 409-05 hypothetical protein YP_003373784.1 590404 D 553190 CDS YP_003373785.1 283783031 8708839 590708..591964 1 NC_013721.1 identified by match to protein family HMM PF00375; transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein 591964 8708839 HMPREF0424_0547 Gardnerella vaginalis 409-05 transporter, dicarboxylate/amino acid:cation (Na+ or H+) symporter (DAACS) family protein YP_003373785.1 590708 D 553190 CDS YP_003373786.1 283783032 8708994 complement(593098..594030) 1 NC_013721.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR01136; match to protein family HMM TIGR01139; cysteine synthase A 594030 cysK 8708994 cysK Gardnerella vaginalis 409-05 cysteine synthase A YP_003373786.1 593098 R 553190 CDS YP_003373787.1 283783033 8709673 594686..595108 1 NC_013721.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 595108 8709673 HMPREF0424_0550 Gardnerella vaginalis 409-05 GNAT family acetyltransferase YP_003373787.1 594686 D 553190 CDS YP_003373788.1 283783034 8709231 595255..596064 1 NC_013721.1 phosphorylase, Pnp/Udp family 596064 8709231 HMPREF0424_0551 Gardnerella vaginalis 409-05 phosphorylase, Pnp/Udp family YP_003373788.1 595255 D 553190 CDS YP_003373789.1 283783035 8708968 596307..598073 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 598073 8708968 HMPREF0424_0552 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373789.1 596307 D 553190 CDS YP_003373790.1 283783036 8709245 598344..598487 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 598487 8709245 HMPREF0424_0553 Gardnerella vaginalis 409-05 hypothetical protein YP_003373790.1 598344 D 553190 CDS YP_003373791.1 283783037 8709956 598514..599500 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 599500 8709956 HMPREF0424_0554 Gardnerella vaginalis 409-05 hypothetical protein YP_003373791.1 598514 D 553190 CDS YP_003373792.1 283783038 8708779 599581..600159 1 NC_013721.1 identified by match to protein family HMM PF04011; LemA family protein 600159 8708779 HMPREF0424_0555 Gardnerella vaginalis 409-05 LemA family protein YP_003373792.1 599581 D 553190 CDS YP_003373793.1 283783039 8709485 600350..600940 1 NC_013721.1 hypothetical protein 600940 8709485 HMPREF0424_0556 Gardnerella vaginalis 409-05 hypothetical protein YP_003373793.1 600350 D 553190 CDS YP_003373794.1 283783040 8708809 600937..601794 1 NC_013721.1 identified by match to protein family HMM PF08843; hypothetical protein 601794 8708809 HMPREF0424_0557 Gardnerella vaginalis 409-05 hypothetical protein YP_003373794.1 600937 D 553190 CDS YP_003373795.1 283783041 8709680 complement(602024..603364) 1 NC_013721.1 identified by match to protein family HMM PF03553; match to protein family HMM PF03600; match to protein family HMM PF06808; Na+/H+ antiporter family protein 603364 8709680 HMPREF0424_0558 Gardnerella vaginalis 409-05 Na+/H+ antiporter family protein YP_003373795.1 602024 R 553190 CDS YP_003373796.1 283783042 8709774 603898..604674 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 604674 8709774 HMPREF0424_0559 Gardnerella vaginalis 409-05 hypothetical protein YP_003373796.1 603898 D 553190 CDS YP_003373797.1 283783043 8709222 604664..606742 1 NC_013721.1 identified by match to protein family HMM PF01061; match to protein family HMM TIGR03061; match to protein family HMM TIGR03062; hypothetical protein 606742 8709222 HMPREF0424_0560 Gardnerella vaginalis 409-05 hypothetical protein YP_003373797.1 604664 D 553190 CDS YP_003373798.1 283783044 8708847 complement(606851..607984) 1 NC_013721.1 identified by match to protein family HMM PF00465; alcohol dehydrogenase, iron-dependent 607984 8708847 HMPREF0424_0561 Gardnerella vaginalis 409-05 alcohol dehydrogenase, iron-dependent YP_003373798.1 606851 R 553190 CDS YP_003373799.1 283783045 8709316 complement(608171..609511) 1 NC_013721.1 identified by match to protein family HMM PF00070; match to protein family HMM PF02852; match to protein family HMM PF07992; pyridine nucleotide-disulfide oxidoreductase 609511 8709316 HMPREF0424_0562 Gardnerella vaginalis 409-05 pyridine nucleotide-disulfide oxidoreductase YP_003373799.1 608171 R 553190 CDS YP_003373800.1 283783046 8709483 609846..610451 1 NC_013721.1 identified by match to protein family HMM PF01470; pyroglutamyl-peptidase I 610451 8709483 HMPREF0424_0563 Gardnerella vaginalis 409-05 pyroglutamyl-peptidase I YP_003373800.1 609846 D 553190 CDS YP_003373801.1 283783047 8709640 complement(610514..610957) 1 NC_013721.1 identified by match to protein family HMM PF05534; toxin-antitoxin system, antitoxin component, HicB family 610957 8709640 HMPREF0424_0564 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component, HicB family YP_003373801.1 610514 R 553190 CDS YP_003373802.1 283783048 8708748 611663..612529 1 NC_013721.1 hypothetical protein 612529 8708748 HMPREF0424_0566 Gardnerella vaginalis 409-05 hypothetical protein YP_003373802.1 611663 D 553190 CDS YP_003373803.1 283783049 8709529 612701..613492 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 613492 8709529 HMPREF0424_0567 Gardnerella vaginalis 409-05 hypothetical protein YP_003373803.1 612701 D 553190 CDS YP_003373804.1 283783050 8709301 613482..616082 1 NC_013721.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; E1-E2 ATPase 616082 8709301 HMPREF0424_0568 Gardnerella vaginalis 409-05 E1-E2 ATPase YP_003373804.1 613482 D 553190 CDS YP_003373805.1 283783051 8709997 616111..617688 1 NC_013721.1 identified by match to protein family HMM PF03313; match to protein family HMM PF03315; match to protein family HMM TIGR00720; L-serine ammonia-lyase 617688 8709997 HMPREF0424_0569 Gardnerella vaginalis 409-05 L-serine ammonia-lyase YP_003373805.1 616111 D 553190 CDS YP_003373806.1 283783052 8709296 617969..618376 1 NC_013721.1 identified by match to protein family HMM PF00254; FKBP-type peptidyl-prolyl cis-trans isomerase 618376 8709296 HMPREF0424_0570 Gardnerella vaginalis 409-05 FKBP-type peptidyl-prolyl cis-trans isomerase YP_003373806.1 617969 D 553190 CDS YP_003373807.1 283783053 8709505 618448..618927 1 NC_013721.1 identified by match to protein family HMM PF01272; match to protein family HMM PF03449; transcription elongation factor GreA/GreB domain-containing protein 618927 8709505 HMPREF0424_0571 Gardnerella vaginalis 409-05 transcription elongation factor GreA/GreB domain-containing protein YP_003373807.1 618448 D 553190 CDS YP_003373808.1 283783054 8709151 complement(619055..619789) 1 NC_013721.1 identified by match to protein family HMM PF00717; match to protein family HMM PF01726; match to protein family HMM TIGR00498; repressor LexA 619789 lexA 8709151 lexA Gardnerella vaginalis 409-05 repressor LexA YP_003373808.1 619055 R 553190 CDS YP_003373809.1 283783055 8709698 619947..620324 1 NC_013721.1 identified by match to protein family HMM PF01476; LysM domain-containing protein 620324 lysM 8709698 lysM Gardnerella vaginalis 409-05 LysM domain-containing protein YP_003373809.1 619947 D 553190 CDS YP_003373810.1 283783056 8708999 620361..620486 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 620486 8708999 HMPREF0424_0574 Gardnerella vaginalis 409-05 hypothetical protein YP_003373810.1 620361 D 553190 CDS YP_003373811.1 283783057 8709523 620557..621012 1 NC_013721.1 identified by match to protein family HMM PF03477; transcriptional regulator NrdR 621012 nrdR 8709523 nrdR Gardnerella vaginalis 409-05 transcriptional regulator NrdR YP_003373811.1 620557 D 553190 CDS YP_003373812.1 283783058 8708753 complement(621074..623350) 1 NC_013721.1 DNA or RNA helicase, Superfamily I family protein 623350 8708753 HMPREF0424_0576 Gardnerella vaginalis 409-05 DNA or RNA helicase, Superfamily I family protein YP_003373812.1 621074 R 553190 CDS YP_003373813.1 283783059 8709382 623692..624648 1 NC_013721.1 identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 624648 8709382 HMPREF0424_0577 Gardnerella vaginalis 409-05 inosine-uridine preferring nucleoside hydrolase YP_003373813.1 623692 D 553190 CDS YP_003373814.1 283783060 8709736 624779..626182 1 NC_013721.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 626182 8709736 HMPREF0424_0578 Gardnerella vaginalis 409-05 transporter, major facilitator family protein YP_003373814.1 624779 D 553190 CDS YP_003373815.1 283783061 8709065 complement(626604..627530) 1 NC_013721.1 hypothetical protein 627530 8709065 HMPREF0424_0579 Gardnerella vaginalis 409-05 hypothetical protein YP_003373815.1 626604 R 553190 CDS YP_003373816.1 283783062 8708826 627782..629227 1 NC_013721.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 629227 8708826 HMPREF0424_0580 Gardnerella vaginalis 409-05 transporter, major facilitator family protein YP_003373816.1 627782 D 553190 CDS YP_003373817.1 283783063 8709672 complement(629382..633467) 1 NC_013721.1 identified by match to protein family HMM PF00271; match to protein family HMM PF04408; match to protein family HMM PF07717; match to protein family HMM TIGR01967; ATP-dependent helicase HrpA 633467 hrpA 8709672 hrpA Gardnerella vaginalis 409-05 ATP-dependent helicase HrpA YP_003373817.1 629382 R 553190 CDS YP_003373818.1 283783064 8709314 complement(633530..634228) 1 NC_013721.1 identified by match to protein family HMM PF05175; methyltransferase small domain-containing protein 634228 8709314 HMPREF0424_0582 Gardnerella vaginalis 409-05 methyltransferase small domain-containing protein YP_003373818.1 633530 R 553190 CDS YP_003373819.1 283783065 8709138 634409..635947 1 NC_013721.1 identified by match to protein family HMM PF01926; match to protein family HMM TIGR03156; GTP-binding protein HflX 635947 hflX 8709138 hflX Gardnerella vaginalis 409-05 GTP-binding protein HflX YP_003373819.1 634409 D 553190 CDS YP_003373820.1 283783066 8710016 636091..637053 1 NC_013721.1 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; match to protein family HMM TIGR01771; L-lactate dehydrogenase 637053 8710016 HMPREF0424_0584 Gardnerella vaginalis 409-05 L-lactate dehydrogenase YP_003373820.1 636091 D 553190 CDS YP_003373821.1 283783067 8709098 637179..638663 1 NC_013721.1 identified by match to protein family HMM PF02518; match to protein family HMM PF07568; match to protein family HMM PF08448; sensor histidine kinase/response regulator 638663 8709098 HMPREF0424_0585 Gardnerella vaginalis 409-05 sensor histidine kinase/response regulator YP_003373821.1 637179 D 553190 CDS YP_003373822.1 283783068 8709849 638850..639122 1 NC_013721.1 identified by match to protein family HMM PF02467; transcription factor WhiB 639122 whiB 8709849 whiB Gardnerella vaginalis 409-05 transcription factor WhiB YP_003373822.1 638850 D 553190 CDS YP_003373823.1 283783069 8708805 complement(639129..640952) 1 NC_013721.1 identified by match to protein family HMM PF01580; FtsK/SpoIIIE family protein 640952 8708805 HMPREF0424_0587 Gardnerella vaginalis 409-05 FtsK/SpoIIIE family protein YP_003373823.1 639129 R 553190 CDS YP_003373824.1 283783070 8709657 complement(641188..642486) 1 NC_013721.1 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 642486 8709657 HMPREF0424_0588 Gardnerella vaginalis 409-05 transcriptional regulator YP_003373824.1 641188 R 553190 CDS YP_003373825.1 283783071 8708767 complement(642591..644087) 1 NC_013721.1 identified by match to protein family HMM PF03816; match to protein family HMM TIGR00350; transcriptional regulator 644087 8708767 HMPREF0424_0589 Gardnerella vaginalis 409-05 transcriptional regulator YP_003373825.1 642591 R 553190 CDS YP_003373826.1 283783072 8709643 644347..647748 1 NC_013721.1 ATP synthase F0 subunit A 647748 8709643 HMPREF0424_0590 Gardnerella vaginalis 409-05 ATP synthase F0 subunit A YP_003373826.1 644347 D 553190 CDS YP_003373827.1 283783073 8709926 647735..649321 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 649321 8709926 HMPREF0424_0591 Gardnerella vaginalis 409-05 hypothetical protein YP_003373827.1 647735 D 553190 CDS YP_003373828.1 283783074 8709504 complement(649398..649826) 1 NC_013721.1 hypothetical protein 649826 8709504 HMPREF0424_0592 Gardnerella vaginalis 409-05 hypothetical protein YP_003373828.1 649398 R 553190 CDS YP_003373829.1 283783075 8709104 649946..650767 1 NC_013721.1 identified by match to protein family HMM PF03332; match to protein family HMM PF08282; match to protein family HMM TIGR01484; eukaryotic phosphomannomutase 650767 8709104 HMPREF0424_0593 Gardnerella vaginalis 409-05 eukaryotic phosphomannomutase YP_003373829.1 649946 D 553190 CDS YP_003373830.1 283783076 8709957 650859..651752 1 NC_013721.1 hypothetical protein 651752 8709957 HMPREF0424_0595 Gardnerella vaginalis 409-05 hypothetical protein YP_003373830.1 650859 D 553190 CDS YP_003373831.1 283783077 8709842 complement(651749..652924) 1 NC_013721.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase/response regulator 652924 8709842 HMPREF0424_0594 Gardnerella vaginalis 409-05 sensor histidine kinase/response regulator YP_003373831.1 651749 R 553190 CDS YP_003373832.1 283783078 8708954 complement(653012..653764) 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 653764 8708954 HMPREF0424_0596 Gardnerella vaginalis 409-05 response regulator receiver domain-containing protein YP_003373832.1 653012 R 553190 CDS YP_003373833.1 283783079 8709930 complement(653781..656066) 1 NC_013721.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM TIGR01515; 1,4-alpha-glucan-branching protein 656066 glgB 8709930 glgB Gardnerella vaginalis 409-05 1,4-alpha-glucan-branching protein YP_003373833.1 653781 R 553190 CDS YP_003373834.1 283783080 8708894 656189..656785 1 NC_013721.1 identified by match to protein family HMM PF02559; CarD-like protein 656785 8708894 HMPREF0424_0598 Gardnerella vaginalis 409-05 CarD-like protein YP_003373834.1 656189 D 553190 CDS YP_003373835.1 283783081 8708752 complement(656999..658051) 1 NC_013721.1 identified by match to protein family HMM PF01297; periplasmic solute binding family protein 658051 8708752 HMPREF0424_0599 Gardnerella vaginalis 409-05 periplasmic solute binding family protein YP_003373835.1 656999 R 553190 CDS YP_003373836.1 283783082 8709632 658173..659057 1 NC_013721.1 identified by match to protein family HMM PF00763; match to protein family HMM PF02882; tetrahydrofolate dehydrogenase/cyclohydrolase 659057 8709632 HMPREF0424_0600 Gardnerella vaginalis 409-05 tetrahydrofolate dehydrogenase/cyclohydrolase YP_003373836.1 658173 D 553190 CDS YP_003373837.1 283783083 8708946 659204..660706 1 NC_013721.1 identified by match to protein family HMM PF00575; 30S ribosomal protein S1 660706 rpsA 8708946 rpsA Gardnerella vaginalis 409-05 30S ribosomal protein S1 YP_003373837.1 659204 D 553190 CDS YP_003373838.1 283783084 8709218 660957..661286 1 NC_013721.1 identified by match to protein family HMM PF05154; TM2 domain-containing protein 661286 8709218 HMPREF0424_0602 Gardnerella vaginalis 409-05 TM2 domain-containing protein YP_003373838.1 660957 D 553190 CDS YP_003373839.1 283783085 8709113 661357..661476 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 661476 8709113 HMPREF0424_0603 Gardnerella vaginalis 409-05 hypothetical protein YP_003373839.1 661357 D 553190 CDS YP_003373840.1 283783086 8709971 661697..662269 1 NC_013721.1 identified by match to protein family HMM PF05154; TM2 domain-containing protein 662269 8709971 HMPREF0424_0604 Gardnerella vaginalis 409-05 TM2 domain-containing protein YP_003373840.1 661697 D 553190 CDS YP_003373841.1 283783087 8709271 662339..663043 1 NC_013721.1 identified by match to protein family HMM PF01121; match to protein family HMM TIGR00152; dephospho-CoA kinase 663043 coaE 8709271 coaE Gardnerella vaginalis 409-05 dephospho-CoA kinase YP_003373841.1 662339 D 553190 CDS YP_003373842.1 283783088 8709472 663064..665178 1 NC_013721.1 identified by match to protein family HMM PF00271; match to protein family HMM PF02151; match to protein family HMM PF04851; match to protein family HMM TIGR00631; excinuclease ABC subunit B 665178 uvrB 8709472 uvrB Gardnerella vaginalis 409-05 excinuclease ABC subunit B YP_003373842.1 663064 D 553190 CDS YP_003373843.1 283783089 8709397 665414..666853 1 NC_013721.1 identified by match to protein family HMM PF00224; match to protein family HMM PF02887; match to protein family HMM TIGR01064; pyruvate kinase 666853 pyk 8709397 pyk Gardnerella vaginalis 409-05 pyruvate kinase YP_003373843.1 665414 D 553190 CDS YP_003373844.1 283783090 8710055 667296..668951 1 NC_013721.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02806; alpha amylase 668951 8710055 HMPREF0424_0609 Gardnerella vaginalis 409-05 alpha amylase YP_003373844.1 667296 D 553190 CDS YP_003373845.1 283783091 8709109 669211..674877 1 NC_013721.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02806; match to protein family HMM PF02922; match to protein family HMM PF03423; match to protein family HMM TIGR02104; pullulanase 674877 pulA_1 8709109 pulA_1 Gardnerella vaginalis 409-05 pullulanase YP_003373845.1 669211 D 553190 CDS YP_003373846.1 283783092 8709601 675547..676173 1 NC_013721.1 hypothetical protein 676173 8709601 HMPREF0424_0611 Gardnerella vaginalis 409-05 hypothetical protein YP_003373846.1 675547 D 553190 CDS YP_003373847.1 283783093 8709071 676317..676898 1 NC_013721.1 hypothetical protein 676898 8709071 HMPREF0424_0612 Gardnerella vaginalis 409-05 hypothetical protein YP_003373847.1 676317 D 553190 CDS YP_003373848.1 283783094 8709437 677118..679001 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02463; cobalt ABC transporter ATP-binding protein 679001 8709437 HMPREF0424_0613 Gardnerella vaginalis 409-05 cobalt ABC transporter ATP-binding protein YP_003373848.1 677118 D 553190 CDS YP_003373849.1 283783095 8708909 679061..679834 1 NC_013721.1 identified by match to protein family HMM PF02361; cobalt transport protein 679834 8708909 HMPREF0424_0614 Gardnerella vaginalis 409-05 cobalt transport protein YP_003373849.1 679061 D 553190 CDS YP_003373850.1 283783096 8709236 679889..680974 1 NC_013721.1 identified by match to protein family HMM PF01040; match to protein family HMM TIGR00751; 1,4-dihydroxy-2-naphthoate octaprenyltransferase 680974 menA 8709236 menA Gardnerella vaginalis 409-05 1,4-dihydroxy-2-naphthoate octaprenyltransferase YP_003373850.1 679889 D 553190 CDS YP_003373851.1 283783097 8710004 681246..681995 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF03861; response regulator receiver domain-containing protein 681995 8710004 HMPREF0424_0616 Gardnerella vaginalis 409-05 response regulator receiver domain-containing protein YP_003373851.1 681246 D 553190 CDS YP_003373852.1 283783098 8709537 682074..685151 1 NC_013721.1 identified by match to protein family HMM PF00476; match to protein family HMM PF01367; match to protein family HMM PF02739; match to protein family HMM TIGR00593; DNA-directed DNA polymerase 685151 polA 8709537 polA Gardnerella vaginalis 409-05 DNA-directed DNA polymerase YP_003373852.1 682074 D 553190 CDS YP_003373853.1 283783099 8708931 685173..686057 1 NC_013721.1 identified by match to protein family HMM PF01784; match to protein family HMM TIGR00486; dinuclear metal center protein, YbgI family 686057 8708931 HMPREF0424_0618 Gardnerella vaginalis 409-05 dinuclear metal center protein, YbgI family YP_003373853.1 685173 D 553190 CDS YP_003373854.1 283783100 8709149 686139..688268 1 NC_013721.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02100; glycogen debranching protein GlgX 688268 glgX 8709149 glgX Gardnerella vaginalis 409-05 glycogen debranching protein GlgX YP_003373854.1 686139 D 553190 CDS YP_003373855.1 283783101 8709847 complement(688375..689478) 1 NC_013721.1 hypothetical protein 689478 8709847 HMPREF0424_0620 Gardnerella vaginalis 409-05 hypothetical protein YP_003373855.1 688375 R 553190 CDS YP_003373856.1 283783102 8710077 689796..691181 1 NC_013721.1 identified by match to protein family HMM PF00275; match to protein family HMM TIGR01356; 3-phosphoshikimate 1-carboxyvinyltransferase 691181 aroA 8710077 aroA Gardnerella vaginalis 409-05 3-phosphoshikimate 1-carboxyvinyltransferase YP_003373856.1 689796 D 553190 CDS YP_003373857.1 283783103 8709972 complement(691262..692491) 1 NC_013721.1 identified by match to protein family HMM PF00871; match to protein family HMM TIGR00016; acetate kinase 692491 ackA 8709972 ackA Gardnerella vaginalis 409-05 acetate kinase YP_003373857.1 691262 R 553190 CDS YP_003373858.1 283783104 8709276 complement(692643..694349) 1 NC_013721.1 identified by match to protein family HMM PF01515; match to protein family HMM TIGR00651; phosphate acetyltransferase 694349 pta 8709276 pta Gardnerella vaginalis 409-05 phosphate acetyltransferase YP_003373858.1 692643 R 553190 CDS YP_003373859.1 283783105 8710001 complement(694637..697132) 1 NC_013721.1 identified by match to protein family HMM PF03894; match to protein family HMM PF09363; match to protein family HMM PF09364; D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase 697132 xfp 8710001 xfp Gardnerella vaginalis 409-05 D-xylulose 5-phosphate/D-fructose 6-phosphate phosphoketolase YP_003373859.1 694637 R 553190 CDS YP_003373860.1 283783106 8708867 697516..699078 1 NC_013721.1 identified by match to protein family HMM PF00117; match to protein family HMM PF00958; match to protein family HMM TIGR00884; match to protein family HMM TIGR00888; GMP synthase 699078 guaA 8708867 guaA Gardnerella vaginalis 409-05 GMP synthase YP_003373860.1 697516 D 553190 CDS YP_003373861.1 283783107 8708930 699665..699874 1 NC_013721.1 hypothetical protein 699874 8708930 HMPREF0424_0627 Gardnerella vaginalis 409-05 hypothetical protein YP_003373861.1 699665 D 553190 CDS YP_003373862.1 283783108 8709687 700078..700563 1 NC_013721.1 identified by match to protein family HMM PF03965; match to protein family HMM TIGR02698; CopY/TcrY family copper transport repressor 700563 8709687 HMPREF0424_0628 Gardnerella vaginalis 409-05 CopY/TcrY family copper transport repressor YP_003373862.1 700078 D 553190 CDS YP_003373863.1 283783109 8709115 700583..702679 1 NC_013721.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525; copper-exporting ATPase 702679 8709115 HMPREF0424_0629 Gardnerella vaginalis 409-05 copper-exporting ATPase YP_003373863.1 700583 D 553190 CDS YP_003373864.1 283783110 8709500 704689..706077 1 NC_013721.1 identified by match to protein family HMM PF04215; PTS system sugar-specific transporter subunit IIC 706077 8709500 HMPREF0424_0633 Gardnerella vaginalis 409-05 PTS system sugar-specific transporter subunit IIC YP_003373864.1 704689 D 553190 CDS YP_003373865.1 283783111 8709918 706292..707023 1 NC_013721.1 identified by match to protein family HMM PF00392; match to protein family HMM PF07702; UbiC transcription regulator-associated 707023 ubiC 8709918 ubiC Gardnerella vaginalis 409-05 UbiC transcription regulator-associated YP_003373865.1 706292 D 553190 CDS YP_003373866.1 283783112 8710073 complement(707320..709266) 1 NC_013721.1 identified by match to protein family HMM PF00890; match to protein family HMM PF01266; match to protein family HMM PF02910; succinate dehydrogenase flavoprotein subunit 709266 8710073 HMPREF0424_0636 Gardnerella vaginalis 409-05 succinate dehydrogenase flavoprotein subunit YP_003373866.1 707320 R 553190 CDS YP_003373867.1 283783113 8708799 complement(709307..710851) 1 NC_013721.1 identified by match to protein family HMM PF02481; match to protein family HMM TIGR00732; DNA protecting protein DprA 710851 dprA 8708799 dprA Gardnerella vaginalis 409-05 DNA protecting protein DprA YP_003373867.1 709307 R 553190 CDS YP_003373868.1 283783114 8709553 complement(710848..712491) 1 NC_013721.1 identified by match to protein family HMM PF01078; match to protein family HMM PF07728; match to protein family HMM TIGR00368; Mg chelatase-like protein 712491 8709553 HMPREF0424_0638 Gardnerella vaginalis 409-05 Mg chelatase-like protein YP_003373868.1 710848 R 553190 CDS YP_003373869.1 283783115 8709017 complement(712491..713039) 1 NC_013721.1 identified by match to protein family HMM PF02021; hypothetical protein 713039 8709017 HMPREF0424_0639 Gardnerella vaginalis 409-05 hypothetical protein YP_003373869.1 712491 R 553190 CDS YP_003373870.1 283783116 8709966 713291..714682 1 NC_013721.1 identified by match to protein family HMM PF01041; match to protein family HMM PF01053; match to protein family HMM PF01212; match to protein family HMM TIGR01326; O-acetylhomoserine aminocarboxypropyltransferase 714682 8709966 HMPREF0424_0640 Gardnerella vaginalis 409-05 O-acetylhomoserine aminocarboxypropyltransferase YP_003373870.1 713291 D 553190 CDS YP_003373871.1 283783117 8709244 714952..715791 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 715791 8709244 HMPREF0424_0641 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373871.1 714952 D 553190 CDS YP_003373872.1 283783118 8709894 715809..718502 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 718502 8709894 HMPREF0424_0642 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003373872.1 715809 D 553190 CDS YP_003373873.1 283783119 8709349 718888..720855 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 720855 8709349 HMPREF0424_0643 Gardnerella vaginalis 409-05 hypothetical protein YP_003373873.1 718888 D 553190 CDS YP_003373874.1 283783120 8708857 complement(720938..721723) 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; match to protein family HMM PF04545; match to protein family HMM PF04967; match to protein family HMM PF08281; response regulator receiver domain-containing protein 721723 8708857 HMPREF0424_0644 Gardnerella vaginalis 409-05 response regulator receiver domain-containing protein YP_003373874.1 720938 R 553190 CDS YP_003373875.1 283783121 8709682 complement(721736..724285) 1 NC_013721.1 identified by match to protein family HMM PF07730; histidine kinase 724285 8709682 HMPREF0424_0645 Gardnerella vaginalis 409-05 histidine kinase YP_003373875.1 721736 R 553190 CDS YP_003373876.1 283783122 8709884 724403..725785 1 NC_013721.1 identified by match to protein family HMM PF00561; hydrolase, alpha/beta domain-containing protein 725785 8709884 HMPREF0424_0646 Gardnerella vaginalis 409-05 hydrolase, alpha/beta domain-containing protein YP_003373876.1 724403 D 553190 CDS YP_003373877.1 283783123 8709171 725912..726715 1 NC_013721.1 identified by match to protein family HMM PF03807; match to protein family HMM TIGR00112; pyrroline-5-carboxylate reductase 726715 proC 8709171 proC Gardnerella vaginalis 409-05 pyrroline-5-carboxylate reductase YP_003373877.1 725912 D 553190 CDS YP_003373878.1 283783124 8709165 726770..727858 1 NC_013721.1 identified by match to protein family HMM PF01926; match to protein family HMM PF06071; match to protein family HMM TIGR00092; GTP-binding protein YchF 727858 ychF 8709165 ychF Gardnerella vaginalis 409-05 GTP-binding protein YchF YP_003373878.1 726770 D 553190 CDS YP_003373879.1 283783125 8709721 728005..728790 1 NC_013721.1 identified by match to protein family HMM PF03734; ErfK/YbiS/YcfS/YnhG protein 728790 8709721 HMPREF0424_0649 Gardnerella vaginalis 409-05 ErfK/YbiS/YcfS/YnhG protein YP_003373879.1 728005 D 553190 CDS YP_003373880.1 283783126 8709660 complement(728893..729954) 1 NC_013721.1 identified by match to protein family HMM PF03601; hypothetical protein 729954 8709660 HMPREF0424_0650 Gardnerella vaginalis 409-05 hypothetical protein YP_003373880.1 728893 R 553190 CDS YP_003373881.1 283783127 8709007 730176..730541 1 NC_013721.1 identified by match to protein family HMM PF04343; hypothetical protein 730541 8709007 HMPREF0424_0651 Gardnerella vaginalis 409-05 hypothetical protein YP_003373881.1 730176 D 553190 CDS YP_003373882.1 283783128 8708812 730880..732169 1 NC_013721.1 identified by match to protein family HMM PF00860; match to protein family HMM PF03594; match to protein family HMM TIGR00801; uracil-xanthine permease 732169 8708812 HMPREF0424_0652 Gardnerella vaginalis 409-05 uracil-xanthine permease YP_003373882.1 730880 D 553190 CDS YP_003373883.1 283783129 8709977 732491..735541 1 NC_013721.1 identified by match to protein family HMM PF03699; hypothetical protein 735541 8709977 HMPREF0424_0653 Gardnerella vaginalis 409-05 hypothetical protein YP_003373883.1 732491 D 553190 CDS YP_003373884.1 283783130 8709850 complement(735642..736433) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 736433 8709850 HMPREF0424_0654 Gardnerella vaginalis 409-05 ABC transporter permease YP_003373884.1 735642 R 553190 CDS YP_003373885.1 283783131 8708965 736742..737794 1 NC_013721.1 identified by match to protein family HMM PF09084; NMT1/THI5-like protein 737794 8708965 HMPREF0424_0655 Gardnerella vaginalis 409-05 NMT1/THI5-like protein YP_003373885.1 736742 D 553190 CDS YP_003373886.1 283783132 8709668 737934..738533 1 NC_013721.1 identified by match to protein family HMM PF01195; match to protein family HMM TIGR00447; aminoacyl-tRNA hydrolase 738533 pth 8709668 pth Gardnerella vaginalis 409-05 aminoacyl-tRNA hydrolase YP_003373886.1 737934 D 553190 CDS YP_003373887.1 283783133 8708796 738523..742131 1 NC_013721.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF02559; match to protein family HMM PF03461; match to protein family HMM PF04851; match to protein family HMM TIGR00580; transcription-repair coupling factor 742131 mfd 8708796 mfd Gardnerella vaginalis 409-05 transcription-repair coupling factor YP_003373887.1 738523 D 553190 CDS YP_003373888.1 283783134 8709535 complement(742169..742906) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 742906 8709535 HMPREF0424_0658 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003373888.1 742169 R 553190 CDS YP_003373889.1 283783135 8709554 complement(743057..744055) 1 NC_013721.1 lipoprotein 744055 8709554 HMPREF0424_0659 Gardnerella vaginalis 409-05 lipoprotein YP_003373889.1 743057 R 553190 CDS YP_003373890.1 283783136 8709169 complement(744210..745025) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 745025 8709169 HMPREF0424_0660 Gardnerella vaginalis 409-05 ABC transporter permease YP_003373890.1 744210 R 553190 CDS YP_003373891.1 283783137 8710021 745350..746645 1 NC_013721.1 identified by match to protein family HMM PF00113; match to protein family HMM PF03952; match to protein family HMM TIGR01060; phosphopyruvate hydratase 746645 eno 8710021 eno Gardnerella vaginalis 409-05 phosphopyruvate hydratase YP_003373891.1 745350 D 553190 CDS YP_003373892.1 283783138 8709315 746856..747770 1 NC_013721.1 identified by match to protein family HMM PF00056; match to protein family HMM PF02866; lactate/malate dehydrogenase, NAD binding domain-containing protein 747770 8709315 HMPREF0424_0663 Gardnerella vaginalis 409-05 lactate/malate dehydrogenase, NAD binding domain-containing protein YP_003373892.1 746856 D 553190 CDS YP_003373893.1 283783139 8709093 748032..748532 1 NC_013721.1 identified by match to protein family HMM PF01288; match to protein family HMM TIGR01498; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase 748532 folK 8709093 folK Gardnerella vaginalis 409-05 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase YP_003373893.1 748032 D 553190 CDS YP_003373894.1 283783140 8709780 748588..749727 1 NC_013721.1 identified by match to protein family HMM PF00809; match to protein family HMM TIGR01496; dihydropteroate synthase 749727 folP 8709780 folP Gardnerella vaginalis 409-05 dihydropteroate synthase YP_003373894.1 748588 D 553190 CDS YP_003373895.1 283783141 8709701 749919..750392 1 NC_013721.1 identified by match to protein family HMM PF04977; septum formation initiator 750392 8709701 HMPREF0424_0666 Gardnerella vaginalis 409-05 septum formation initiator YP_003373895.1 749919 D 553190 CDS YP_003373896.1 283783142 8709194 750474..752180 1 NC_013721.1 identified by match to protein family HMM PF02541; match to protein family HMM PF04417; Ppx/GppA phosphatase family protein 752180 8709194 HMPREF0424_0667 Gardnerella vaginalis 409-05 Ppx/GppA phosphatase family protein YP_003373896.1 750474 D 553190 CDS YP_003373897.1 283783143 8710035 752541..753572 1 NC_013721.1 identified by match to protein family HMM PF01545; match to protein family HMM TIGR01297; cation diffusion facilitator family transporter 753572 8710035 HMPREF0424_0669 Gardnerella vaginalis 409-05 cation diffusion facilitator family transporter YP_003373897.1 752541 D 553190 CDS YP_003373898.1 283783144 8709712 753685..754593 1 NC_013721.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; TrmH family RNA methyltransferase 754593 8709712 HMPREF0424_0670 Gardnerella vaginalis 409-05 TrmH family RNA methyltransferase YP_003373898.1 753685 D 553190 CDS YP_003373899.1 283783145 8708850 754577..755731 1 NC_013721.1 identified by match to protein family HMM PF01409; match to protein family HMM PF02912; match to protein family HMM TIGR00468; phenylalanyl-tRNA synthetase subunit alpha 755731 pheS 8708850 pheS Gardnerella vaginalis 409-05 phenylalanyl-tRNA synthetase subunit alpha YP_003373899.1 754577 D 553190 CDS YP_003373900.1 283783146 8708914 755737..758358 1 NC_013721.1 identified by match to protein family HMM PF01588; match to protein family HMM PF03147; match to protein family HMM PF03483; match to protein family HMM PF03484; match to protein family HMM TIGR00472; phenylalanyl-tRNA synthetase subunit beta 758358 pheT 8708914 pheT Gardnerella vaginalis 409-05 phenylalanyl-tRNA synthetase subunit beta YP_003373900.1 755737 D 553190 CDS YP_003373901.1 283783147 8709430 758552..759154 1 NC_013721.1 identified by match to protein family HMM PF01316; match to protein family HMM PF02863; arginine repressor domain-containing protein 759154 8709430 HMPREF0424_0673 Gardnerella vaginalis 409-05 arginine repressor domain-containing protein YP_003373901.1 758552 D 553190 CDS YP_003373902.1 283783148 8709357 759431..760645 1 NC_013721.1 identified by match to protein family HMM PF00764; match to protein family HMM PF06508; match to protein family HMM TIGR00032; argininosuccinate synthase 760645 argG 8709357 argG Gardnerella vaginalis 409-05 argininosuccinate synthase YP_003373902.1 759431 D 553190 CDS YP_003373903.1 283783149 8709797 760682..762199 1 NC_013721.1 identified by match to protein family HMM PF00206; match to protein family HMM TIGR00838; argininosuccinate lyase 762199 argH 8709797 argH Gardnerella vaginalis 409-05 argininosuccinate lyase YP_003373903.1 760682 D 553190 CDS YP_003373904.1 283783150 8709003 762366..763685 1 NC_013721.1 identified by match to protein family HMM PF00579; match to protein family HMM PF01479; match to protein family HMM TIGR00234; tyrosine--tRNA ligase 763685 tyrS 8709003 tyrS Gardnerella vaginalis 409-05 tyrosine--tRNA ligase YP_003373904.1 762366 D 553190 CDS YP_003373905.1 283783151 8709622 763838..765469 1 NC_013721.1 hypothetical protein 765469 8709622 HMPREF0424_0677 Gardnerella vaginalis 409-05 hypothetical protein YP_003373905.1 763838 D 553190 CDS YP_003373906.1 283783152 8709152 765614..766714 1 NC_013721.1 identified by match to protein family HMM TIGR01460; HAD hydrolase, family IIA 766714 8709152 HMPREF0424_0678 Gardnerella vaginalis 409-05 HAD hydrolase, family IIA YP_003373906.1 765614 D 553190 CDS YP_003373907.1 283783153 8709856 766711..767514 1 NC_013721.1 identified by match to protein family HMM PF01479; match to protein family HMM PF01728; ribosomal RNA large subunit methyltransferase J 767514 rrmJ 8709856 rrmJ Gardnerella vaginalis 409-05 ribosomal RNA large subunit methyltransferase J YP_003373907.1 766711 D 553190 CDS YP_003373908.1 283783154 8709287 767605..768528 1 NC_013721.1 identified by match to protein family HMM PF01513; NAD(+)/NADH kinase 768528 8709287 HMPREF0424_0680 Gardnerella vaginalis 409-05 NAD(+)/NADH kinase YP_003373908.1 767605 D 553190 CDS YP_003373909.1 283783155 8710014 768583..770367 1 NC_013721.1 identified by match to protein family HMM PF02463; match to protein family HMM TIGR00634; DNA repair protein RecN 770367 recN 8710014 recN Gardnerella vaginalis 409-05 DNA repair protein RecN YP_003373909.1 768583 D 553190 CDS YP_003373910.1 283783156 8709249 770351..771031 1 NC_013721.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD hydrolase, family IA, variant 3 771031 8709249 HMPREF0424_0682 Gardnerella vaginalis 409-05 HAD hydrolase, family IA, variant 3 YP_003373910.1 770351 D 553190 CDS YP_003373911.1 283783157 8710033 771635..772306 1 NC_013721.1 identified by match to protein family HMM PF02482; match to protein family HMM TIGR00741; ribosomal subunit interface protein 772306 raiA 8710033 raiA Gardnerella vaginalis 409-05 ribosomal subunit interface protein YP_003373911.1 771635 D 553190 CDS YP_003373912.1 283783158 8710022 772494..775289 1 NC_013721.1 identified by match to protein family HMM PF01043; match to protein family HMM PF02810; match to protein family HMM PF07516; match to protein family HMM PF07517; match to protein family HMM TIGR00963; Preprotein translocase subunit SecA 775289 secA 8710022 secA Gardnerella vaginalis 409-05 Preprotein translocase subunit SecA YP_003373912.1 772494 D 553190 CDS YP_003373913.1 283783159 8709303 complement(775373..776041) 1 NC_013721.1 hypothetical protein 776041 8709303 HMPREF0424_0686 Gardnerella vaginalis 409-05 hypothetical protein YP_003373913.1 775373 R 553190 CDS YP_003373914.1 283783160 8708824 776019..776138 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 776138 8708824 HMPREF0424_0687 Gardnerella vaginalis 409-05 hypothetical protein YP_003373914.1 776019 D 553190 CDS YP_003373915.1 283783161 8709474 776117..776824 1 NC_013721.1 identified by match to protein family HMM PF01553; acyltransferase 776824 8709474 HMPREF0424_0688 Gardnerella vaginalis 409-05 acyltransferase YP_003373915.1 776117 D 553190 CDS YP_003373916.1 283783162 8709935 complement(776942..779332) 1 NC_013721.1 identified by match to protein family HMM PF00069; match to protein family HMM PF03793; kinase domain-containing protein 779332 8709935 HMPREF0424_0689 Gardnerella vaginalis 409-05 kinase domain-containing protein YP_003373916.1 776942 R 553190 CDS YP_003373917.1 283783163 8709331 complement(779430..780536) 1 NC_013721.1 identified by match to protein family HMM PF00348; polyprenyl synthetase 780536 8709331 HMPREF0424_0690 Gardnerella vaginalis 409-05 polyprenyl synthetase YP_003373917.1 779430 R 553190 CDS YP_003373918.1 283783164 8709571 780731..781597 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 781597 8709571 HMPREF0424_0691 Gardnerella vaginalis 409-05 hypothetical protein YP_003373918.1 780731 D 553190 CDS YP_003373919.1 283783165 8709185 781727..783196 1 NC_013721.1 identified by match to protein family HMM PF00140; match to protein family HMM PF04539; match to protein family HMM PF04542; match to protein family HMM PF04545; match to protein family HMM TIGR02393; match to protein family HMM TIGR02937; RNA polymerase sigma factor RpoD 783196 rpoD 8709185 rpoD Gardnerella vaginalis 409-05 RNA polymerase sigma factor RpoD YP_003373919.1 781727 D 553190 CDS YP_003373920.1 283783166 8709518 783303..785681 1 NC_013721.1 identified by match to protein family HMM PF00204; match to protein family HMM PF00986; match to protein family HMM PF02518; DNA gyrase subunit B domain-containing protein 785681 8709518 HMPREF0424_0693 Gardnerella vaginalis 409-05 DNA gyrase subunit B domain-containing protein YP_003373920.1 783303 D 553190 CDS YP_003373921.1 283783167 8709037 785798..786979 1 NC_013721.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 786979 8709037 HMPREF0424_0694 Gardnerella vaginalis 409-05 transporter, major facilitator family protein YP_003373921.1 785798 D 553190 CDS YP_003373922.1 283783168 8709386 787131..787373 1 NC_013721.1 hypothetical protein 787373 8709386 HMPREF0424_0695 Gardnerella vaginalis 409-05 hypothetical protein YP_003373922.1 787131 D 553190 CDS YP_003373923.1 283783169 8708843 787370..787864 1 NC_013721.1 hypothetical protein 787864 8708843 HMPREF0424_0696 Gardnerella vaginalis 409-05 hypothetical protein YP_003373923.1 787370 D 553190 CDS YP_003373924.1 283783170 8709763 787871..788098 1 NC_013721.1 hypothetical protein 788098 8709763 HMPREF0424_0697 Gardnerella vaginalis 409-05 hypothetical protein YP_003373924.1 787871 D 553190 CDS YP_003373925.1 283783171 8709199 788219..790423 1 NC_013721.1 identified by match to protein family HMM PF07523; match to protein family HMM PF09479; match to protein family HMM TIGR02543; phage prohead protease, HK97 family 790423 8709199 HMPREF0424_0698 Gardnerella vaginalis 409-05 phage prohead protease, HK97 family YP_003373925.1 788219 D 553190 CDS YP_003373926.1 283783172 8709652 complement(790460..793123) 1 NC_013721.1 identified by match to protein family HMM PF00521; match to protein family HMM PF03989; DNA gyrase/topoisomerase IV, A subunit 793123 8709652 HMPREF0424_0699 Gardnerella vaginalis 409-05 DNA gyrase/topoisomerase IV, A subunit YP_003373926.1 790460 R 553190 CDS YP_003373927.1 283783173 8708769 793285..794544 1 NC_013721.1 identified by match to protein family HMM PF01663; type I phosphodiesterase/nucleotide pyrophosphatase 794544 8708769 HMPREF0424_0700 Gardnerella vaginalis 409-05 type I phosphodiesterase/nucleotide pyrophosphatase YP_003373927.1 793285 D 553190 CDS YP_003373928.1 283783174 8708937 complement(794678..795886) 1 NC_013721.1 hypothetical protein 795886 8708937 HMPREF0424_0701 Gardnerella vaginalis 409-05 hypothetical protein YP_003373928.1 794678 R 553190 CDS YP_003373929.1 283783175 8709857 796045..796338 1 NC_013721.1 hypothetical protein 796338 8709857 HMPREF0424_0702 Gardnerella vaginalis 409-05 hypothetical protein YP_003373929.1 796045 D 553190 CDS YP_003373930.1 283783176 8709140 796339..796818 1 NC_013721.1 identified by match to protein family HMM PF00692; match to protein family HMM TIGR00576; dUTP diphosphatase 796818 dut 8709140 dut Gardnerella vaginalis 409-05 dUTP diphosphatase YP_003373930.1 796339 D 553190 CDS YP_003373931.1 283783177 8709982 796941..799292 1 NC_013721.1 identified by match to protein family HMM PF01842; match to protein family HMM PF01966; match to protein family HMM PF02824; match to protein family HMM PF04607; match to protein family HMM TIGR00691; GTP diphosphokinase 799292 relA 8709982 relA Gardnerella vaginalis 409-05 GTP diphosphokinase YP_003373931.1 796941 D 553190 CDS YP_003373932.1 283783178 8709266 complement(799382..799663) 1 NC_013721.1 identified by match to protein family HMM PF00216; DNA-binding protein HU 799663 hup 8709266 hup Gardnerella vaginalis 409-05 DNA-binding protein HU YP_003373932.1 799382 R 553190 CDS YP_003373933.1 283783179 8708842 complement(799869..802304) 1 NC_013721.1 identified by match to protein family HMM PF03706; match to protein family HMM TIGR00374; hypothetical protein 802304 8708842 HMPREF0424_0706 Gardnerella vaginalis 409-05 hypothetical protein YP_003373933.1 799869 R 553190 CDS YP_003373934.1 283783180 8709662 complement(802320..803762) 1 NC_013721.1 identified by match to protein family HMM PF00206; match to protein family HMM PF08328; match to protein family HMM TIGR00928; adenylosuccinate lyase 803762 purB 8709662 purB Gardnerella vaginalis 409-05 adenylosuccinate lyase YP_003373934.1 802320 R 553190 CDS YP_003373935.1 283783181 8709713 complement(803825..805432) 1 NC_013721.1 hypothetical protein 805432 8709713 HMPREF0424_0708 Gardnerella vaginalis 409-05 hypothetical protein YP_003373935.1 803825 R 553190 CDS YP_003373936.1 283783182 8709629 complement(805733..806323) 1 NC_013721.1 hypothetical protein 806323 8709629 HMPREF0424_0709 Gardnerella vaginalis 409-05 hypothetical protein YP_003373936.1 805733 R 553190 CDS YP_003373937.1 283783183 8709455 complement(806320..807435) 1 NC_013721.1 identified by match to protein family HMM PF00092; overlaps another CDS with the same product name; von Willebrand factor type A domain-containing protein 807435 8709455 HMPREF0424_0710 Gardnerella vaginalis 409-05 von Willebrand factor type A domain-containing protein YP_003373937.1 806320 R 553190 CDS YP_003373938.1 283783184 8708766 complement(807432..808568) 1 NC_013721.1 identified by match to protein family HMM PF00092; overlaps another CDS with the same product name; von Willebrand factor type A domain-containing protein 808568 8708766 HMPREF0424_0711 Gardnerella vaginalis 409-05 von Willebrand factor type A domain-containing protein YP_003373938.1 807432 R 553190 CDS YP_003373939.1 283783185 8709888 complement(808568..809095) 1 NC_013721.1 hypothetical protein 809095 8709888 HMPREF0424_0712 Gardnerella vaginalis 409-05 hypothetical protein YP_003373939.1 808568 R 553190 CDS YP_003373940.1 283783186 8709162 complement(809097..810038) 1 NC_013721.1 identified by match to protein family HMM PF01882; hypothetical protein 810038 8709162 HMPREF0424_0713 Gardnerella vaginalis 409-05 hypothetical protein YP_003373940.1 809097 R 553190 CDS YP_003373941.1 283783187 8709751 complement(810035..811168) 1 NC_013721.1 identified by match to protein family HMM PF07726; match to protein family HMM PF07728; ATPase family associated with various cellular activities (AAA) 811168 8709751 HMPREF0424_0714 Gardnerella vaginalis 409-05 ATPase family associated with various cellular activities (AAA) YP_003373941.1 810035 R 553190 CDS YP_003373942.1 283783188 8709549 complement(811250..811966) 1 NC_013721.1 identified by match to protein family HMM PF03167; match to protein family HMM TIGR00628; uracil-DNA glycosylase 811966 ung 8709549 ung Gardnerella vaginalis 409-05 uracil-DNA glycosylase YP_003373942.1 811250 R 553190 CDS YP_003373943.1 283783189 8709137 812094..812762 1 NC_013721.1 hypothetical protein 812762 8709137 HMPREF0424_0716 Gardnerella vaginalis 409-05 hypothetical protein YP_003373943.1 812094 D 553190 CDS YP_003373944.1 283783190 8709844 812963..814588 1 NC_013721.1 identified by match to protein family HMM PF00118; match to protein family HMM TIGR02348; chaperonin GroL 814588 groL 8709844 groL Gardnerella vaginalis 409-05 chaperonin GroL YP_003373944.1 812963 D 553190 CDS YP_003373945.1 283783191 8708862 complement(814695..814988) 1 NC_013721.1 identified by match to protein family HMM PF06013; hypothetical protein 814988 8708862 HMPREF0424_0718 Gardnerella vaginalis 409-05 hypothetical protein YP_003373945.1 814695 R 553190 CDS YP_003373946.1 283783192 8710010 815040..815945 1 NC_013721.1 hypothetical protein 815945 8710010 HMPREF0424_0719 Gardnerella vaginalis 409-05 hypothetical protein YP_003373946.1 815040 D 553190 CDS YP_003373947.1 283783193 8708950 816024..816764 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00486; response regulator receiver domain-containing protein 816764 8708950 HMPREF0424_0720 Gardnerella vaginalis 409-05 response regulator receiver domain-containing protein YP_003373947.1 816024 D 553190 CDS YP_003373948.1 283783194 8709489 816767..818713 1 NC_013721.1 identified by match to protein family HMM PF00512; match to protein family HMM PF00672; match to protein family HMM PF02518; sensor histidine kinase/response regulator 818713 8709489 HMPREF0424_0721 Gardnerella vaginalis 409-05 sensor histidine kinase/response regulator YP_003373948.1 816767 D 553190 CDS YP_003373949.1 283783195 8709727 818905..819294 1 NC_013721.1 identified by match to protein family HMM PF00313; cold-shock protein 819294 8709727 HMPREF0424_0722 Gardnerella vaginalis 409-05 cold-shock protein YP_003373949.1 818905 D 553190 CDS YP_003373950.1 283783196 8709589 819294..820700 1 NC_013721.1 hypothetical protein 820700 8709589 HMPREF0424_0723 Gardnerella vaginalis 409-05 hypothetical protein YP_003373950.1 819294 D 553190 CDS YP_003373951.1 283783197 8709881 820852..823440 1 NC_013721.1 identified by match to protein family HMM PF00004; match to protein family HMM PF02151; match to protein family HMM PF02861; match to protein family HMM PF07724; match to protein family HMM PF07728; negative regulator of genetic competence ClpC/MecB 823440 clpC 8709881 clpC Gardnerella vaginalis 409-05 negative regulator of genetic competence ClpC/MecB YP_003373951.1 820852 D 553190 CDS YP_003373952.1 283783198 8709323 complement(823532..823861) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 823861 8709323 HMPREF0424_0725 Gardnerella vaginalis 409-05 hypothetical protein YP_003373952.1 823532 R 553190 CDS YP_003373953.1 283783199 8709088 complement(823888..824217) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 824217 8709088 HMPREF0424_0726 Gardnerella vaginalis 409-05 hypothetical protein YP_003373953.1 823888 R 553190 CDS YP_003373954.1 283783200 8709602 complement(824525..824665) 1 NC_013721.1 hypothetical protein 824665 8709602 HMPREF0424_0727 Gardnerella vaginalis 409-05 hypothetical protein YP_003373954.1 824525 R 553190 CDS YP_003373955.1 283783201 8709044 825847..826047 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 826047 8709044 HMPREF0424_0728 Gardnerella vaginalis 409-05 hypothetical protein YP_003373955.1 825847 D 553190 CDS YP_003373956.1 283783202 8709451 826074..826667 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 826667 8709451 HMPREF0424_0729 Gardnerella vaginalis 409-05 hypothetical protein YP_003373956.1 826074 D 553190 CDS YP_003373957.1 283783203 8708858 827429..827617 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 827617 8708858 HMPREF0424_0730 Gardnerella vaginalis 409-05 hypothetical protein YP_003373957.1 827429 D 553190 CDS YP_003373958.1 283783204 8709940 827746..829269 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 829269 8709940 HMPREF0424_0731 Gardnerella vaginalis 409-05 hypothetical protein YP_003373958.1 827746 D 553190 CDS YP_003373959.1 283783205 8709085 830038..830529 1 NC_013721.1 identified by match to protein family HMM PF00293; NUDIX family hydrolase 830529 8709085 HMPREF0424_0732 Gardnerella vaginalis 409-05 NUDIX family hydrolase YP_003373959.1 830038 D 553190 CDS YP_003373960.1 283783206 8709638 831233..831667 1 NC_013721.1 cytidine/deoxycytidylate deaminase family protein 831667 8709638 HMPREF0424_0733 Gardnerella vaginalis 409-05 cytidine/deoxycytidylate deaminase family protein YP_003373960.1 831233 D 553190 CDS YP_003373961.1 283783207 8709822 831739..832707 1 NC_013721.1 hypothetical protein 832707 8709822 HMPREF0424_0734 Gardnerella vaginalis 409-05 hypothetical protein YP_003373961.1 831739 D 553190 CDS YP_003373962.1 283783208 8709198 833304..833864 1 NC_013721.1 hypothetical protein 833864 8709198 HMPREF0424_0735 Gardnerella vaginalis 409-05 hypothetical protein YP_003373962.1 833304 D 553190 CDS YP_003373963.1 283783209 8709978 833874..834800 1 NC_013721.1 hypothetical protein 834800 8709978 HMPREF0424_0736 Gardnerella vaginalis 409-05 hypothetical protein YP_003373963.1 833874 D 553190 CDS YP_003373964.1 283783210 8709284 835265..835459 1 NC_013721.1 hypothetical protein 835459 8709284 HMPREF0424_0737 Gardnerella vaginalis 409-05 hypothetical protein YP_003373964.1 835265 D 553190 CDS YP_003373965.1 283783211 8709496 835658..837058 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 837058 8709496 HMPREF0424_0738 Gardnerella vaginalis 409-05 hypothetical protein YP_003373965.1 835658 D 553190 CDS YP_003373966.1 283783212 8708822 837358..838071 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 838071 8708822 HMPREF0424_0739 Gardnerella vaginalis 409-05 hypothetical protein YP_003373966.1 837358 D 553190 CDS YP_003373967.1 283783213 8709575 complement(838170..838469) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 838469 8709575 HMPREF0424_0740 Gardnerella vaginalis 409-05 hypothetical protein YP_003373967.1 838170 R 553190 CDS YP_003373968.1 283783214 8709812 838658..839518 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 839518 8709812 HMPREF0424_0741 Gardnerella vaginalis 409-05 hypothetical protein YP_003373968.1 838658 D 553190 CDS YP_003373969.1 283783215 8709147 839976..841277 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 841277 8709147 HMPREF0424_0742 Gardnerella vaginalis 409-05 hypothetical protein YP_003373969.1 839976 D 553190 CDS YP_003373970.1 283783216 8710017 841441..841557 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 841557 8710017 HMPREF0424_0743 Gardnerella vaginalis 409-05 hypothetical protein YP_003373970.1 841441 D 553190 CDS YP_003373971.1 283783217 8709336 841627..841794 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 841794 8709336 HMPREF0424_0744 Gardnerella vaginalis 409-05 hypothetical protein YP_003373971.1 841627 D 553190 CDS YP_003373972.1 283783218 8709750 842056..843393 1 NC_013721.1 hypothetical protein 843393 8709750 HMPREF0424_0745 Gardnerella vaginalis 409-05 hypothetical protein YP_003373972.1 842056 D 553190 CDS YP_003373973.1 283783219 8709075 complement(843659..843991) 1 NC_013721.1 identified by match to protein family HMM PF05016; toxin-antitoxin system, toxin component, RelE family 843991 8709075 HMPREF0424_0746 Gardnerella vaginalis 409-05 toxin-antitoxin system, toxin component, RelE family YP_003373973.1 843659 R 553190 CDS YP_003373974.1 283783220 8709555 complement(843988..844302) 1 NC_013721.1 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component 844302 8709555 HMPREF0424_0747 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component YP_003373974.1 843988 R 553190 CDS YP_003373975.1 283783221 8708880 844709..845467 1 NC_013721.1 hypothetical protein 845467 8708880 HMPREF0424_0748 Gardnerella vaginalis 409-05 hypothetical protein YP_003373975.1 844709 D 553190 CDS YP_003373976.1 283783222 8709421 846353..847360 1 NC_013721.1 type II DNA modification methyltransferase family protein 847360 8709421 HMPREF0424_0749 Gardnerella vaginalis 409-05 type II DNA modification methyltransferase family protein YP_003373976.1 846353 D 553190 CDS YP_003373977.1 283783223 8709765 847338..851432 1 NC_013721.1 identified by match to protein family HMM PF04851; match to protein family HMM PF07669; Eco57I restriction endonuclease 851432 8709765 HMPREF0424_0750 Gardnerella vaginalis 409-05 Eco57I restriction endonuclease YP_003373977.1 847338 D 553190 CDS YP_003373978.1 283783224 8709371 851446..852000 1 NC_013721.1 hypothetical protein 852000 8709371 HMPREF0424_0751 Gardnerella vaginalis 409-05 hypothetical protein YP_003373978.1 851446 D 553190 CDS YP_003373979.1 283783225 8709557 852019..853305 1 NC_013721.1 hypothetical protein 853305 8709557 HMPREF0424_0752 Gardnerella vaginalis 409-05 hypothetical protein YP_003373979.1 852019 D 553190 CDS YP_003373980.1 283783226 8709181 853482..853850 1 NC_013721.1 hypothetical protein 853850 8709181 HMPREF0424_0753 Gardnerella vaginalis 409-05 hypothetical protein YP_003373980.1 853482 D 553190 CDS YP_003373981.1 283783227 8709716 857265..858341 1 NC_013721.1 hypothetical protein 858341 8709716 HMPREF0424_0757 Gardnerella vaginalis 409-05 hypothetical protein YP_003373981.1 857265 D 553190 CDS YP_003373982.1 283783228 8708917 858506..859534 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 859534 8708917 HMPREF0424_0758 Gardnerella vaginalis 409-05 hypothetical protein YP_003373982.1 858506 D 553190 CDS YP_003373983.1 283783229 8709870 860091..862937 1 NC_013721.1 identified by match to protein family HMM TIGR01587; match to protein family HMM TIGR01596; CRISPR-associated helicase Cas3 862937 cas3 8709870 cas3 Gardnerella vaginalis 409-05 CRISPR-associated helicase Cas3 YP_003373983.1 860091 D 553190 CDS YP_003373984.1 283783230 8709410 862934..864604 1 NC_013721.1 identified by match to protein family HMM PF09481; match to protein family HMM TIGR02547; CRISPR system CASCADE complex protein CasA 864604 casA 8709410 casA Gardnerella vaginalis 409-05 CRISPR system CASCADE complex protein CasA YP_003373984.1 862934 D 553190 CDS YP_003373985.1 283783231 8709029 864626..865240 1 NC_013721.1 identified by match to protein family HMM PF09485; match to protein family HMM TIGR02548; CRISPR system CASCADE complex protein CasB 865240 casB 8709029 casB Gardnerella vaginalis 409-05 CRISPR system CASCADE complex protein CasB YP_003373985.1 864626 D 553190 CDS YP_003373986.1 283783232 8709545 865328..866416 1 NC_013721.1 identified by match to protein family HMM PF09344; match to protein family HMM TIGR01869; CRISPR system CASCADE complex protein CasC 866416 casC 8709545 casC Gardnerella vaginalis 409-05 CRISPR system CASCADE complex protein CasC YP_003373986.1 865328 D 553190 CDS YP_003373987.1 283783233 8709782 866475..867350 1 NC_013721.1 identified by match to protein family HMM PF09708; match to protein family HMM TIGR01868; match to protein family HMM TIGR02593; CRISPR system CASCADE complex protein CasD 867350 casD 8709782 casD Gardnerella vaginalis 409-05 CRISPR system CASCADE complex protein CasD YP_003373987.1 866475 D 553190 CDS YP_003373988.1 283783234 8709805 867351..867998 1 NC_013721.1 identified by match to protein family HMM PF08798; match to protein family HMM TIGR01907; CRISPR system CASCADE complex protein CasE 867998 casE 8709805 casE Gardnerella vaginalis 409-05 CRISPR system CASCADE complex protein CasE YP_003373988.1 867351 D 553190 CDS YP_003373989.1 283783235 8709646 868034..868975 1 NC_013721.1 identified by match to protein family HMM TIGR00287; match to protein family HMM TIGR03638; CRISPR-associated endonuclease Cas1, ECOLI subtype 868975 cas2 8709646 cas2 Gardnerella vaginalis 409-05 CRISPR-associated endonuclease Cas1, ECOLI subtype YP_003373989.1 868034 D 553190 CDS YP_003373990.1 283783236 8709011 868977..870056 1 NC_013721.1 identified by match to protein family HMM PF00929; match to protein family HMM PF09707; match to protein family HMM TIGR01873; CRISPR-associated endoribonuclease Cas2 870056 cas1 8709011 cas1 Gardnerella vaginalis 409-05 CRISPR-associated endoribonuclease Cas2 YP_003373990.1 868977 D 553190 CDS YP_003373991.1 283783237 8708849 complement(870795..870938) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 870938 8708849 HMPREF0424_0767 Gardnerella vaginalis 409-05 hypothetical protein YP_003373991.1 870795 R 553190 CDS YP_003373992.1 283783238 8710034 871921..873162 1 NC_013721.1 identified by match to protein family HMM PF01546; match to protein family HMM PF07687; match to protein family HMM TIGR01879; allantoate amidohydrolase 873162 8710034 HMPREF0424_0773 Gardnerella vaginalis 409-05 allantoate amidohydrolase YP_003373992.1 871921 D 553190 CDS YP_003373993.1 283783239 8709319 873472..874956 1 NC_013721.1 identified by match to protein family HMM PF02133; NCS1 nucleoside transporter family protein 874956 ncs 8709319 ncs Gardnerella vaginalis 409-05 NCS1 nucleoside transporter family protein YP_003373993.1 873472 D 553190 CDS YP_003373994.1 283783240 8709921 874958..876334 1 NC_013721.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR03178; allantoinase 876334 allB 8709921 allB Gardnerella vaginalis 409-05 allantoinase YP_003373994.1 874958 D 553190 CDS YP_003373995.1 283783241 8709463 876395..876592 1 NC_013721.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 876592 thiS_1 8709463 thiS_1 Gardnerella vaginalis 409-05 thiamine biosynthesis protein ThiS YP_003373995.1 876395 D 553190 CDS YP_003373996.1 283783242 8708834 876593..877216 1 NC_013721.1 identified by match to protein family HMM PF00899; match to protein family HMM TIGR02354; thiamine biosynthesis protein ThiF 877216 thiF 8708834 thiF Gardnerella vaginalis 409-05 thiamine biosynthesis protein ThiF YP_003373996.1 876593 D 553190 CDS YP_003373997.1 283783243 8709693 877194..877973 1 NC_013721.1 identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG 877973 thiG_1 8709693 thiG_1 Gardnerella vaginalis 409-05 thiazole biosynthesis protein ThiG YP_003373997.1 877194 D 553190 CDS YP_003373998.1 283783244 8710066 878385..881837 1 NC_013721.1 identified by match to protein family HMM PF00515; hypothetical protein 881837 8710066 HMPREF0424_0780 Gardnerella vaginalis 409-05 hypothetical protein YP_003373998.1 878385 D 553190 CDS YP_003373999.1 283783245 8709562 881971..884859 1 NC_013721.1 identified by match to protein family HMM PF00533; match to protein family HMM PF00633; match to protein family HMM PF01653; match to protein family HMM PF03119; match to protein family HMM PF03120; match to protein family HMM TIGR00575; DNA ligase (NAD(+)) 884859 ligA 8709562 ligA Gardnerella vaginalis 409-05 DNA ligase (NAD(+)) YP_003373999.1 881971 D 553190 CDS YP_003374000.1 283783246 8709540 884863..885990 1 NC_013721.1 identified by match to protein family HMM PF01883; CobQ/CobB/MinD/ParA nucleotide binding domain family protein 885990 8709540 HMPREF0424_0782 Gardnerella vaginalis 409-05 CobQ/CobB/MinD/ParA nucleotide binding domain family protein YP_003374000.1 884863 D 553190 CDS YP_003374001.1 283783247 8709016 complement(886084..887454) 1 NC_013721.1 identified by match to protein family HMM PF03993; hypothetical protein 887454 8709016 HMPREF0424_0783 Gardnerella vaginalis 409-05 hypothetical protein YP_003374001.1 886084 R 553190 CDS YP_003374002.1 283783248 8709561 887503..888951 1 NC_013721.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00442; histidine--tRNA ligase 888951 hisS 8709561 hisS Gardnerella vaginalis 409-05 histidine--tRNA ligase YP_003374002.1 887503 D 553190 CDS YP_003374003.1 283783249 8708996 889043..890839 1 NC_013721.1 identified by match to protein family HMM PF00152; match to protein family HMM PF01336; match to protein family HMM PF02938; match to protein family HMM TIGR00459; aspartate--tRNA ligase 890839 aspS 8708996 aspS Gardnerella vaginalis 409-05 aspartate--tRNA ligase YP_003374003.1 889043 D 553190 CDS YP_003374004.1 283783250 8709143 890986..891798 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 891798 8709143 HMPREF0424_0786 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374004.1 890986 D 553190 CDS YP_003374005.1 283783251 8709835 891869..892702 1 NC_013721.1 identified by match to protein family HMM PF00497; extracellular solute-binding protein 892702 8709835 HMPREF0424_0787 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374005.1 891869 D 553190 CDS YP_003374006.1 283783252 8709429 892704..893381 1 NC_013721.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter permease 893381 8709429 HMPREF0424_0788 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374006.1 892704 D 553190 CDS YP_003374007.1 283783253 8710007 893387..894472 1 NC_013721.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter permease 894472 8710007 HMPREF0424_0789 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374007.1 893387 D 553190 CDS YP_003374008.1 283783254 8709062 894682..896121 1 NC_013721.1 identified by match to protein family HMM PF01704; UTP--glucose-1-phosphate uridylyltransferase 896121 8709062 HMPREF0424_0790 Gardnerella vaginalis 409-05 UTP--glucose-1-phosphate uridylyltransferase YP_003374008.1 894682 D 553190 CDS YP_003374009.1 283783255 8709136 896414..898333 1 NC_013721.1 hypothetical protein 898333 8709136 HMPREF0424_0791 Gardnerella vaginalis 409-05 hypothetical protein YP_003374009.1 896414 D 553190 CDS YP_003374010.1 283783256 8709596 898336..898677 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 898677 8709596 HMPREF0424_0792 Gardnerella vaginalis 409-05 hypothetical protein YP_003374010.1 898336 D 553190 CDS YP_003374011.1 283783257 8709719 898705..901338 1 NC_013721.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; match to protein family HMM PF04851; match to protein family HMM PF08148; DEAD/DEAH box helicase 901338 8709719 HMPREF0424_0793 Gardnerella vaginalis 409-05 DEAD/DEAH box helicase YP_003374011.1 898705 D 553190 CDS YP_003374012.1 283783258 8709641 901448..901795 1 NC_013721.1 hypothetical protein 901795 8709641 HMPREF0424_0794 Gardnerella vaginalis 409-05 hypothetical protein YP_003374012.1 901448 D 553190 CDS YP_003374013.1 283783259 8708936 901788..902522 1 NC_013721.1 identified by match to protein family HMM PF00702; haloacid dehalogenase-like hydrolase 902522 8708936 HMPREF0424_0795 Gardnerella vaginalis 409-05 haloacid dehalogenase-like hydrolase YP_003374013.1 901788 D 553190 CDS YP_003374014.1 283783260 8708908 complement(902778..903161) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 903161 8708908 HMPREF0424_0796 Gardnerella vaginalis 409-05 hypothetical protein YP_003374014.1 902778 R 553190 CDS YP_003374015.1 283783261 8709769 complement(903166..903771) 1 NC_013721.1 hypothetical protein 903771 8709769 HMPREF0424_0797 Gardnerella vaginalis 409-05 hypothetical protein YP_003374015.1 903166 R 553190 CDS YP_003374016.1 283783262 8708774 complement(903749..904189) 1 NC_013721.1 identified by match to protein family HMM PF00498; FHA domain-containing protein 904189 8708774 HMPREF0424_0798 Gardnerella vaginalis 409-05 FHA domain-containing protein YP_003374016.1 903749 R 553190 CDS YP_003374017.1 283783263 8709925 complement(904208..905044) 1 NC_013721.1 identified by match to protein family HMM PF05949; hypothetical protein 905044 8709925 HMPREF0424_0799 Gardnerella vaginalis 409-05 hypothetical protein YP_003374017.1 904208 R 553190 CDS YP_003374018.1 283783264 8708922 complement(905048..905380) 1 NC_013721.1 identified by match to protein family HMM PF06947; small basic protein 905380 8708922 HMPREF0424_0800 Gardnerella vaginalis 409-05 small basic protein YP_003374018.1 905048 R 553190 CDS YP_003374019.1 283783265 8709655 complement(905383..906432) 1 NC_013721.1 identified by match to protein family HMM PF05949; hypothetical protein 906432 8709655 HMPREF0424_0801 Gardnerella vaginalis 409-05 hypothetical protein YP_003374019.1 905383 R 553190 CDS YP_003374020.1 283783266 8708998 complement(906452..907057) 1 NC_013721.1 identified by match to protein family HMM PF01066; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 907057 8708998 HMPREF0424_0802 Gardnerella vaginalis 409-05 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003374020.1 906452 R 553190 CDS YP_003374021.1 283783267 8709838 complement(907182..907847) 1 NC_013721.1 identified by match to protein family HMM PF00834; match to protein family HMM TIGR01163; ribulose-phosphate 3-epimerase 907847 rpe 8709838 rpe Gardnerella vaginalis 409-05 ribulose-phosphate 3-epimerase YP_003374021.1 907182 R 553190 CDS YP_003374022.1 283783268 8709135 complement(907927..908844) 1 NC_013721.1 identified by match to protein family HMM PF01790; match to protein family HMM TIGR00544; prolipoprotein diacylglyceryl transferase 908844 lgt 8709135 lgt Gardnerella vaginalis 409-05 prolipoprotein diacylglyceryl transferase YP_003374022.1 907927 R 553190 CDS YP_003374023.1 283783269 8709899 complement(908887..909918) 1 NC_013721.1 identified by match to protein family HMM PF01148; phosphatidate cytidylyltransferase 909918 cdsA 8709899 cdsA Gardnerella vaginalis 409-05 phosphatidate cytidylyltransferase YP_003374023.1 908887 R 553190 CDS YP_003374024.1 283783270 8709282 complement(909952..910506) 1 NC_013721.1 identified by match to protein family HMM PF01765; match to protein family HMM TIGR00496; ribosome recycling factor 910506 frr 8709282 frr Gardnerella vaginalis 409-05 ribosome recycling factor YP_003374024.1 909952 R 553190 CDS YP_003374025.1 283783271 8709965 complement(910526..911275) 1 NC_013721.1 identified by match to protein family HMM PF00696; match to protein family HMM TIGR02075; UMP kinase 911275 pyrH 8709965 pyrH Gardnerella vaginalis 409-05 UMP kinase YP_003374025.1 910526 R 553190 CDS YP_003374026.1 283783272 8709501 complement(911451..912302) 1 NC_013721.1 identified by match to protein family HMM PF00627; match to protein family HMM PF00889; match to protein family HMM TIGR00116; translation elongation factor Ts 912302 tsf 8709501 tsf Gardnerella vaginalis 409-05 translation elongation factor Ts YP_003374026.1 911451 R 553190 CDS YP_003374027.1 283783273 8708855 complement(912403..913221) 1 NC_013721.1 identified by match to protein family HMM PF00318; match to protein family HMM TIGR01011; 30S ribosomal protein S2 913221 rpsB 8708855 rpsB Gardnerella vaginalis 409-05 30S ribosomal protein S2 YP_003374027.1 912403 R 553190 CDS YP_003374028.1 283783274 8709931 913177..913353 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 913353 8709931 HMPREF0424_0810 Gardnerella vaginalis 409-05 hypothetical protein YP_003374028.1 913177 D 553190 CDS YP_003374029.1 283783275 8709992 complement(913531..914019) 1 NC_013721.1 identified by match to protein family HMM PF01327; match to protein family HMM TIGR00079; peptide deformylase 914019 def_1 8709992 def_1 Gardnerella vaginalis 409-05 peptide deformylase YP_003374029.1 913531 R 553190 CDS YP_003374030.1 283783276 8708786 complement(914085..916124) 1 NC_013721.1 identified by match to protein family HMM PF00501; AMP-binding protein 916124 8708786 HMPREF0424_0812 Gardnerella vaginalis 409-05 AMP-binding protein YP_003374030.1 914085 R 553190 CDS YP_003374031.1 283783277 8709498 complement(916412..917002) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 917002 8709498 HMPREF0424_0813 Gardnerella vaginalis 409-05 hypothetical protein YP_003374031.1 916412 R 553190 CDS YP_003374032.1 283783278 8708945 complement(917369..918499) 1 NC_013721.1 identified by match to protein family HMM PF00478; match to protein family HMM TIGR01304; IMP dehydrogenase family protein 918499 8708945 HMPREF0424_0814 Gardnerella vaginalis 409-05 IMP dehydrogenase family protein YP_003374032.1 917369 R 553190 CDS YP_003374033.1 283783279 8709052 complement(918567..920909) 1 NC_013721.1 identified by match to protein family HMM PF00633; match to protein family HMM PF01541; match to protein family HMM PF02151; match to protein family HMM PF08459; match to protein family HMM TIGR00194; excinuclease ABC subunit C 920909 uvrC 8709052 uvrC Gardnerella vaginalis 409-05 excinuclease ABC subunit C YP_003374033.1 918567 R 553190 CDS YP_003374034.1 283783280 8709609 complement(921012..923963) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR00630; excinuclease ABC subunit A 923963 uvrA 8709609 uvrA Gardnerella vaginalis 409-05 excinuclease ABC subunit A YP_003374034.1 921012 R 553190 CDS YP_003374035.1 283783281 8709837 924188..925789 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 925789 8709837 HMPREF0424_0817 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374035.1 924188 D 553190 CDS YP_003374036.1 283783282 8709124 925836..928052 1 NC_013721.1 hypothetical protein 928052 8709124 HMPREF0424_0818 Gardnerella vaginalis 409-05 hypothetical protein YP_003374036.1 925836 D 553190 CDS YP_003374037.1 283783283 8709299 complement(928072..929259) 1 NC_013721.1 identified by match to protein family HMM PF00155; class I/II aminotransferase 929259 8709299 HMPREF0424_0819 Gardnerella vaginalis 409-05 class I/II aminotransferase YP_003374037.1 928072 R 553190 CDS YP_003374038.1 283783284 8709706 complement(929353..930126) 1 NC_013721.1 identified by match to protein family HMM PF00480; ROK family protein 930126 8709706 HMPREF0424_0820 Gardnerella vaginalis 409-05 ROK family protein YP_003374038.1 929353 R 553190 CDS YP_003374039.1 283783285 8708817 complement(930220..931254) 1 NC_013721.1 identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein 931254 8708817 HMPREF0424_0821 Gardnerella vaginalis 409-05 glycosyltransferase, group 2 family protein YP_003374039.1 930220 R 553190 CDS YP_003374040.1 283783286 8709967 931480..932049 1 NC_013721.1 hypothetical protein 932049 8709967 HMPREF0424_0823 Gardnerella vaginalis 409-05 hypothetical protein YP_003374040.1 931480 D 553190 CDS YP_003374041.1 283783287 8709469 932097..934409 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF02361; cobalt ABC transporter ATP-binding protein 934409 8709469 HMPREF0424_0824 Gardnerella vaginalis 409-05 cobalt ABC transporter ATP-binding protein YP_003374041.1 932097 D 553190 CDS YP_003374042.1 283783288 8708773 934578..934883 1 NC_013721.1 identified by match to protein family HMM PF01985; RNA-binding protein, YhbY family 934883 8708773 HMPREF0424_0825 Gardnerella vaginalis 409-05 RNA-binding protein, YhbY family YP_003374042.1 934578 D 553190 CDS YP_003374043.1 283783289 8709614 complement(934897..936285) 1 NC_013721.1 identified by match to protein family HMM PF00004; recombination factor protein RarA 936285 8709614 HMPREF0424_0826 Gardnerella vaginalis 409-05 recombination factor protein RarA YP_003374043.1 934897 R 553190 CDS YP_003374044.1 283783290 8709058 complement(936373..938901) 1 NC_013721.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 938901 8709058 HMPREF0424_0827 Gardnerella vaginalis 409-05 DEAD/DEAH box helicase YP_003374044.1 936373 R 553190 CDS YP_003374045.1 283783291 8709396 complement(938952..941156) 1 NC_013721.1 identified by match to protein family HMM PF01926; match to protein family HMM PF02224; match to protein family HMM PF08477; match to protein family HMM TIGR00231; match to protein family HMM TIGR03594; ribosome-associated GTPase EngA 941156 engA 8709396 engA Gardnerella vaginalis 409-05 ribosome-associated GTPase EngA YP_003374045.1 938952 R 553190 CDS YP_003374046.1 283783292 8708904 complement(941153..942007) 1 NC_013721.1 identified by match to protein family HMM PF00849; match to protein family HMM PF01479; match to protein family HMM TIGR00093; pseudouridylate synthase 942007 8708904 HMPREF0424_0829 Gardnerella vaginalis 409-05 pseudouridylate synthase YP_003374046.1 941153 R 553190 CDS YP_003374047.1 283783293 8709696 942173..943144 1 NC_013721.1 identified by match to protein family HMM PF00230; transporter, major intrinsic protein (MIP) family protein 943144 8709696 HMPREF0424_0830 Gardnerella vaginalis 409-05 transporter, major intrinsic protein (MIP) family protein YP_003374047.1 942173 D 553190 CDS YP_003374048.1 283783294 8708974 complement(943153..943470) 1 NC_013721.1 hypothetical protein 943470 8708974 HMPREF0424_0831 Gardnerella vaginalis 409-05 hypothetical protein YP_003374048.1 943153 R 553190 CDS YP_003374049.1 283783295 8709725 complement(943612..945282) 1 NC_013721.1 identified by match to protein family HMM PF01808; match to protein family HMM PF02142; phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 945282 8709725 HMPREF0424_0832 Gardnerella vaginalis 409-05 phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_003374049.1 943612 R 553190 CDS YP_003374050.1 283783296 8709184 complement(945316..946689) 1 NC_013721.1 hypothetical protein 946689 8709184 HMPREF0424_0833 Gardnerella vaginalis 409-05 hypothetical protein YP_003374050.1 945316 R 553190 CDS YP_003374051.1 283783297 8708932 complement(946779..947360) 1 NC_013721.1 identified by match to protein family HMM PF00156; adenine phosphoribosyltransferase 947360 8708932 HMPREF0424_0834 Gardnerella vaginalis 409-05 adenine phosphoribosyltransferase YP_003374051.1 946779 R 553190 CDS YP_003374052.1 283783298 8709446 complement(947501..947902) 1 NC_013721.1 identified by match to protein family HMM PF02699; match to protein family HMM TIGR00739; preprotein translocase subunit YajC 947902 yajC 8709446 yajC Gardnerella vaginalis 409-05 preprotein translocase subunit YajC YP_003374052.1 947501 R 553190 CDS YP_003374053.1 283783299 8708836 complement(947962..949023) 1 NC_013721.1 identified by match to protein family HMM PF00004; match to protein family HMM PF05491; match to protein family HMM PF05496; match to protein family HMM PF07728; match to protein family HMM TIGR00635; Holliday junction DNA helicase RuvB 949023 ruvB 8708836 ruvB Gardnerella vaginalis 409-05 Holliday junction DNA helicase RuvB YP_003374053.1 947962 R 553190 CDS YP_003374054.1 283783300 8709519 complement(949061..949690) 1 NC_013721.1 identified by match to protein family HMM PF01330; match to protein family HMM TIGR00084; Holliday junction DNA helicase RuvA 949690 ruvA 8709519 ruvA Gardnerella vaginalis 409-05 Holliday junction DNA helicase RuvA YP_003374054.1 949061 R 553190 CDS YP_003374055.1 283783301 8709197 complement(949778..950359) 1 NC_013721.1 identified by match to protein family HMM PF02075; match to protein family HMM TIGR00228; crossover junction endodeoxyribonuclease RuvC 950359 ruvC 8709197 ruvC Gardnerella vaginalis 409-05 crossover junction endodeoxyribonuclease RuvC YP_003374055.1 949778 R 553190 CDS YP_003374056.1 283783302 8709882 complement(950366..951124) 1 NC_013721.1 identified by match to protein family HMM PF01709; match to protein family HMM TIGR01033; YebC/PmpR family DNA-binding regulatory protein 951124 8709882 HMPREF0424_0839 Gardnerella vaginalis 409-05 YebC/PmpR family DNA-binding regulatory protein YP_003374056.1 950366 R 553190 CDS YP_003374057.1 283783303 8709573 complement(951187..951843) 1 NC_013721.1 identified by match to protein family HMM PF01066; CDP-alcohol phosphatidyltransferase 951843 8709573 HMPREF0424_0840 Gardnerella vaginalis 409-05 CDP-alcohol phosphatidyltransferase YP_003374057.1 951187 R 553190 CDS YP_003374058.1 283783304 8709080 complement(952059..954089) 1 NC_013721.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM PF07973; match to protein family HMM TIGR00418; threonine--tRNA ligase 954089 thrS 8709080 thrS Gardnerella vaginalis 409-05 threonine--tRNA ligase YP_003374058.1 952059 R 553190 CDS YP_003374059.1 283783305 8709416 complement(954272..955165) 1 NC_013721.1 identified by match to protein family HMM PF00950; ABC transporter 955165 8709416 HMPREF0424_0842 Gardnerella vaginalis 409-05 ABC transporter YP_003374059.1 954272 R 553190 CDS YP_003374060.1 283783306 8708866 complement(955166..956122) 1 NC_013721.1 identified by match to protein family HMM PF00950; ABC transporter 956122 8708866 HMPREF0424_0843 Gardnerella vaginalis 409-05 ABC transporter YP_003374060.1 955166 R 553190 CDS YP_003374061.1 283783307 8709272 complement(956129..956872) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 956872 8709272 HMPREF0424_0844 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374061.1 956129 R 553190 CDS YP_003374062.1 283783308 8709134 complement(956996..958177) 1 NC_013721.1 identified by match to protein family HMM PF01297; periplasmic solute binding family protein 958177 8709134 HMPREF0424_0845 Gardnerella vaginalis 409-05 periplasmic solute binding family protein YP_003374062.1 956996 R 553190 CDS YP_003374063.1 283783309 8709878 958473..958613 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 958613 8709878 HMPREF0424_0846 Gardnerella vaginalis 409-05 hypothetical protein YP_003374063.1 958473 D 553190 CDS YP_003374064.1 283783310 8709462 958650..959801 1 NC_013721.1 identified by match to protein family HMM PF01256; YjeF domain-containing protein 959801 8709462 HMPREF0424_0847 Gardnerella vaginalis 409-05 YjeF domain-containing protein YP_003374064.1 958650 D 553190 CDS YP_003374065.1 283783311 8708890 959900..960550 1 NC_013721.1 identified by match to protein family HMM PF00702; match to protein family HMM TIGR01509; HAD hydrolase, family IA, variant 3 960550 8708890 HMPREF0424_0848 Gardnerella vaginalis 409-05 HAD hydrolase, family IA, variant 3 YP_003374065.1 959900 D 553190 CDS YP_003374066.1 283783312 8709603 960731..961663 1 NC_013721.1 identified by match to protein family HMM PF00126; LysR family transcriptional regulator 961663 8709603 HMPREF0424_0849 Gardnerella vaginalis 409-05 LysR family transcriptional regulator YP_003374066.1 960731 D 553190 CDS YP_003374067.1 283783313 8709375 961879..962328 1 NC_013721.1 XRE family transcriptional regulator 962328 8709375 HMPREF0424_0850 Gardnerella vaginalis 409-05 XRE family transcriptional regulator YP_003374067.1 961879 D 553190 CDS YP_003374068.1 283783314 8709875 complement(962527..962982) 1 NC_013721.1 hypothetical protein 962982 8709875 HMPREF0424_0851 Gardnerella vaginalis 409-05 hypothetical protein YP_003374068.1 962527 R 553190 CDS YP_003374069.1 283783315 8710009 complement(963040..964350) 1 NC_013721.1 identified by match to protein family HMM PF04055; match to protein family HMM PF06969; match to protein family HMM TIGR00539; oxygen-independent coproporphyrinogen III oxidase 964350 8710009 HMPREF0424_0852 Gardnerella vaginalis 409-05 oxygen-independent coproporphyrinogen III oxidase YP_003374069.1 963040 R 553190 CDS YP_003374070.1 283783316 8709119 complement(964359..966239) 1 NC_013721.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF06421; match to protein family HMM TIGR00231; match to protein family HMM TIGR01393; GTP-binding protein LepA 966239 lepA 8709119 lepA Gardnerella vaginalis 409-05 GTP-binding protein LepA YP_003374070.1 964359 R 553190 CDS YP_003374071.1 283783317 8709411 966502..966762 1 NC_013721.1 identified by match to protein family HMM PF01649; match to protein family HMM TIGR00029; 30S ribosomal protein S20 966762 rpsT 8709411 rpsT Gardnerella vaginalis 409-05 30S ribosomal protein S20 YP_003374071.1 966502 D 553190 CDS YP_003374072.1 283783318 8708848 complement(966834..966971) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 966971 8708848 HMPREF0424_0855 Gardnerella vaginalis 409-05 hypothetical protein YP_003374072.1 966834 R 553190 CDS YP_003374073.1 283783319 8708959 complement(967140..967697) 1 NC_013721.1 hypothetical protein 967697 8708959 HMPREF0424_0856 Gardnerella vaginalis 409-05 hypothetical protein YP_003374073.1 967140 R 553190 CDS YP_003374074.1 283783320 8709511 complement(968557..969285) 1 NC_013721.1 identified by match to protein family HMM PF03458; hypothetical protein 969285 8709511 HMPREF0424_0857 Gardnerella vaginalis 409-05 hypothetical protein YP_003374074.1 968557 R 553190 CDS YP_003374075.1 283783321 8709771 complement(969411..970580) 1 NC_013721.1 identified by match to protein family HMM PF01063; match to protein family HMM TIGR01123; branched-chain-amino-acid transaminase 970580 ilvE 8709771 ilvE Gardnerella vaginalis 409-05 branched-chain-amino-acid transaminase YP_003374075.1 969411 R 553190 CDS YP_003374076.1 283783322 8709097 complement(970826..971449) 1 NC_013721.1 identified by match to protein family HMM PF01386; match to protein family HMM TIGR00731; 50S ribosomal protein L25 971449 8709097 HMPREF0424_0859 Gardnerella vaginalis 409-05 50S ribosomal protein L25 YP_003374076.1 970826 R 553190 CDS YP_003374077.1 283783323 8709848 971776..973824 1 NC_013721.1 identified by match to protein family HMM PF00501; AMP-binding protein 973824 8709848 HMPREF0424_0860 Gardnerella vaginalis 409-05 AMP-binding protein YP_003374077.1 971776 D 553190 CDS YP_003374078.1 283783324 8709490 complement(974005..975066) 1 NC_013721.1 identified by match to protein family HMM PF01926; match to protein family HMM PF07650; match to protein family HMM TIGR00231; match to protein family HMM TIGR00436; GTP-binding protein Era 975066 era 8709490 era Gardnerella vaginalis 409-05 GTP-binding protein Era YP_003374078.1 974005 R 553190 CDS YP_003374079.1 283783325 8710023 complement(975089..976588) 1 NC_013721.1 identified by match to protein family HMM PF00571; match to protein family HMM PF03471; hypothetical protein 976588 8710023 HMPREF0424_0862 Gardnerella vaginalis 409-05 hypothetical protein YP_003374079.1 975089 R 553190 CDS YP_003374080.1 283783326 8709626 complement(976609..977169) 1 NC_013721.1 identified by match to protein family HMM PF02130; match to protein family HMM TIGR00043; metalloprotein, YbeY family 977169 ybeY 8709626 ybeY Gardnerella vaginalis 409-05 metalloprotein, YbeY family YP_003374080.1 976609 R 553190 CDS YP_003374081.1 283783327 8708783 complement(977173..978366) 1 NC_013721.1 identified by match to protein family HMM PF02562; PhoH family protein 978366 8708783 HMPREF0424_0864 Gardnerella vaginalis 409-05 PhoH family protein YP_003374081.1 977173 R 553190 CDS YP_003374082.1 283783328 8709861 complement(978370..978732) 1 NC_013721.1 identified by match to protein family HMM PF01230; histidine triad domain-containing protein 978732 8709861 HMPREF0424_0865 Gardnerella vaginalis 409-05 histidine triad domain-containing protein YP_003374082.1 978370 R 553190 CDS YP_003374083.1 283783329 8708804 complement(978845..979642) 1 NC_013721.1 identified by match to protein family HMM PF04452; match to protein family HMM TIGR00046; RsmE family RNA methyltransferase 979642 8708804 HMPREF0424_0866 Gardnerella vaginalis 409-05 RsmE family RNA methyltransferase YP_003374083.1 978845 R 553190 CDS YP_003374084.1 283783330 8709980 979737..980813 1 NC_013721.1 identified by match to protein family HMM TIGR00384; succinate dehydrogenase iron-sulfur subunit 980813 8709980 HMPREF0424_0867 Gardnerella vaginalis 409-05 succinate dehydrogenase iron-sulfur subunit YP_003374084.1 979737 D 553190 CDS YP_003374085.1 283783331 8709400 complement(980815..981615) 1 NC_013721.1 identified by match to protein family HMM PF03641; match to protein family HMM TIGR00730; hypothetical protein 981615 8709400 HMPREF0424_0868 Gardnerella vaginalis 409-05 hypothetical protein YP_003374085.1 980815 R 553190 CDS YP_003374086.1 283783332 8709937 complement(981667..982926) 1 NC_013721.1 identified by match to protein family HMM PF06965; Na+/H+ antiporter NhaA 982926 8709937 HMPREF0424_0869 Gardnerella vaginalis 409-05 Na+/H+ antiporter NhaA YP_003374086.1 981667 R 553190 CDS YP_003374087.1 283783333 8709524 complement(983232..984128) 1 NC_013721.1 hypothetical protein 984128 8709524 HMPREF0424_0870 Gardnerella vaginalis 409-05 hypothetical protein YP_003374087.1 983232 R 553190 CDS YP_003374088.1 283783334 8709435 complement(984221..986119) 1 NC_013721.1 hypothetical protein 986119 8709435 HMPREF0424_0871 Gardnerella vaginalis 409-05 hypothetical protein YP_003374088.1 984221 R 553190 CDS YP_003374089.1 283783335 8709051 987304..988521 1 NC_013721.1 identified by match to protein family HMM PF07690; match to protein family HMM TIGR00900; H+ Antiporter protein 988521 8709051 HMPREF0424_0872 Gardnerella vaginalis 409-05 H+ Antiporter protein YP_003374089.1 987304 D 553190 CDS YP_003374090.1 283783336 8709952 988641..990104 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 990104 8709952 HMPREF0424_0873 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374090.1 988641 D 553190 CDS YP_003374091.1 283783337 8708911 991036..993360 1 NC_013721.1 identified by match to protein family HMM PF03288; match to protein family HMM PF08706; match to protein family HMM TIGR01613; nucleoside triphosphatase, D5 family 993360 8708911 HMPREF0424_0874 Gardnerella vaginalis 409-05 nucleoside triphosphatase, D5 family YP_003374091.1 991036 D 553190 CDS YP_003374092.1 283783338 8709352 993779..994726 1 NC_013721.1 identified by match to protein family HMM PF05065; phage capsid family protein 994726 8709352 HMPREF0424_0875 Gardnerella vaginalis 409-05 phage capsid family protein YP_003374092.1 993779 D 553190 CDS YP_003374093.1 283783339 8709740 994984..996636 1 NC_013721.1 identified by match to protein family HMM PF00239; match to protein family HMM PF07508; TnpX site-specific recombinase family protein 996636 8709740 HMPREF0424_0876 Gardnerella vaginalis 409-05 TnpX site-specific recombinase family protein YP_003374093.1 994984 D 553190 CDS YP_003374094.1 283783340 8710072 complement(996958..997632) 1 NC_013721.1 identified by match to protein family HMM PF00574; Clp protease 997632 clpP_1 8710072 clpP_1 Gardnerella vaginalis 409-05 Clp protease YP_003374094.1 996958 R 553190 CDS YP_003374095.1 283783341 8709903 complement(997635..998246) 1 NC_013721.1 identified by match to protein family HMM PF00574; Clp protease 998246 clpP_2 8709903 clpP_2 Gardnerella vaginalis 409-05 Clp protease YP_003374095.1 997635 R 553190 CDS YP_003374096.1 283783342 8709747 998461..999249 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 999249 8709747 HMPREF0424_0880 Gardnerella vaginalis 409-05 hypothetical protein YP_003374096.1 998461 D 553190 CDS YP_003374097.1 283783343 8709645 complement(999386..1000783) 1 NC_013721.1 identified by match to protein family HMM PF00654; chloride transporter 1000783 8709645 HMPREF0424_0881 Gardnerella vaginalis 409-05 chloride transporter YP_003374097.1 999386 R 553190 CDS YP_003374098.1 283783344 8708926 complement(1000933..1002282) 1 NC_013721.1 identified by match to protein family HMM PF00254; match to protein family HMM PF05697; match to protein family HMM PF05698; match to protein family HMM TIGR00115; trigger factor 1002282 tig 8708926 tig Gardnerella vaginalis 409-05 trigger factor YP_003374098.1 1000933 R 553190 CDS YP_003374099.1 283783345 8709449 complement(1002336..1003766) 1 NC_013721.1 identified by match to protein family HMM PF00570; match to protein family HMM PF01612; 3'-5' exonuclease 1003766 8709449 HMPREF0424_0883 Gardnerella vaginalis 409-05 3'-5' exonuclease YP_003374099.1 1002336 R 553190 CDS YP_003374100.1 283783346 8709423 complement(1003958..1004338) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1004338 8709423 HMPREF0424_0884 Gardnerella vaginalis 409-05 hypothetical protein YP_003374100.1 1003958 R 553190 CDS YP_003374101.1 283783347 8709377 complement(1004485..1005366) 1 NC_013721.1 identified by match to protein family HMM PF04055; match to protein family HMM TIGR02493; pyruvate formate-lyase activating enzyme 1005366 pflA 8709377 pflA Gardnerella vaginalis 409-05 pyruvate formate-lyase activating enzyme YP_003374101.1 1004485 R 553190 CDS YP_003374102.1 283783348 8709879 complement(1005477..1007852) 1 NC_013721.1 identified by match to protein family HMM PF01228; match to protein family HMM PF02901; match to protein family HMM TIGR01255; formate C-acetyltransferase 1007852 pflB 8709879 pflB Gardnerella vaginalis 409-05 formate C-acetyltransferase YP_003374102.1 1005477 R 553190 CDS YP_003374103.1 283783349 8709190 complement(1007970..1009682) 1 NC_013721.1 identified by match to protein family HMM PF00795; match to protein family HMM PF02540; match to protein family HMM PF06508; match to protein family HMM TIGR00552; NAD+ synthetase 1009682 nadE 8709190 nadE Gardnerella vaginalis 409-05 NAD+ synthetase YP_003374103.1 1007970 R 553190 CDS YP_003374104.1 283783350 8709752 1009904..1010737 1 NC_013721.1 identified by match to protein family HMM PF03180; NLPA lipoprotein 1010737 8709752 HMPREF0424_0888 Gardnerella vaginalis 409-05 NLPA lipoprotein YP_003374104.1 1009904 D 553190 CDS YP_003374105.1 283783351 8709262 1010930..1011778 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1011778 8709262 HMPREF0424_0889 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374105.1 1010930 D 553190 CDS YP_003374106.1 283783352 8709768 1011781..1012461 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1012461 8709768 HMPREF0424_0890 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374106.1 1011781 D 553190 CDS YP_003374107.1 283783353 8709229 1012629..1015286 1 NC_013721.1 identified by match to protein family HMM PF01964; match to protein family HMM PF02581; match to protein family HMM TIGR00190; thiamine biosynthesis protein ThiC 1015286 thiC 8709229 thiC Gardnerella vaginalis 409-05 thiamine biosynthesis protein ThiC YP_003374107.1 1012629 D 553190 CDS YP_003374108.1 283783354 8709642 complement(1015617..1016153) 1 NC_013721.1 identified by match to protein family HMM PF00160; cyclophilin type peptidyl-prolyl cis-trans isomerase 1016153 8709642 HMPREF0424_0893 Gardnerella vaginalis 409-05 cyclophilin type peptidyl-prolyl cis-trans isomerase YP_003374108.1 1015617 R 553190 CDS YP_003374109.1 283783355 8708943 complement(1016389..1018539) 1 NC_013721.1 LPXTG-motif cell wall anchor domain-containing protein 1018539 8708943 HMPREF0424_0894 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374109.1 1016389 R 553190 CDS YP_003374110.1 283783356 8709880 1022530..1022646 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1022646 8709880 HMPREF0424_0897 Gardnerella vaginalis 409-05 hypothetical protein YP_003374110.1 1022530 D 553190 CDS YP_003374111.1 283783357 8709450 complement(1022639..1023469) 1 NC_013721.1 identified by match to protein family HMM PF00459; inositol monophosphatase family protein 1023469 8709450 HMPREF0424_0896 Gardnerella vaginalis 409-05 inositol monophosphatase family protein YP_003374111.1 1022639 R 553190 CDS YP_003374112.1 283783358 8709328 complement(1023696..1024370) 1 NC_013721.1 identified by match to protein family HMM PF00702; match to protein family HMM PF08282; match to protein family HMM TIGR00338; match to protein family HMM TIGR01488; phosphoserine phosphatase SerB 1024370 serB 8709328 serB Gardnerella vaginalis 409-05 phosphoserine phosphatase SerB YP_003374112.1 1023696 R 553190 CDS YP_003374113.1 283783359 8708902 complement(1024375..1025358) 1 NC_013721.1 identified by match to protein family HMM PF00551; match to protein family HMM PF02911; match to protein family HMM TIGR00460; methionyl-tRNA formyltransferase 1025358 fmt 8708902 fmt Gardnerella vaginalis 409-05 methionyl-tRNA formyltransferase YP_003374113.1 1024375 R 553190 CDS YP_003374114.1 283783360 8709588 complement(1025405..1026556) 1 NC_013721.1 identified by match to protein family HMM PF00226; match to protein family HMM PF00684; match to protein family HMM PF01556; chaperone protein DnaJ 1026556 8709588 HMPREF0424_0900 Gardnerella vaginalis 409-05 chaperone protein DnaJ YP_003374114.1 1025405 R 553190 CDS YP_003374115.1 283783361 8709919 complement(1026647..1027684) 1 NC_013721.1 identified by match to protein family HMM PF01628; match to protein family HMM TIGR00331; heat-inducible transcription repressor HrcA 1027684 hrcA 8709919 hrcA Gardnerella vaginalis 409-05 heat-inducible transcription repressor HrcA YP_003374115.1 1026647 R 553190 CDS YP_003374116.1 283783362 8709342 1027883..1029982 1 NC_013721.1 identified by match to protein family HMM PF00456; match to protein family HMM PF02779; match to protein family HMM PF02780; match to protein family HMM TIGR00232; transketolase 1029982 tkt 8709342 tkt Gardnerella vaginalis 409-05 transketolase YP_003374116.1 1027883 D 553190 CDS YP_003374117.1 283783363 8709702 1030251..1031354 1 NC_013721.1 identified by match to protein family HMM PF00923; match to protein family HMM TIGR00876; transaldolase 1031354 tal 8709702 tal Gardnerella vaginalis 409-05 transaldolase YP_003374117.1 1030251 D 553190 CDS YP_003374118.1 283783364 8709350 complement(1031614..1033245) 1 NC_013721.1 identified by match to protein family HMM PF04326; divergent AAA domain-containing protein 1033245 8709350 HMPREF0424_0904 Gardnerella vaginalis 409-05 divergent AAA domain-containing protein YP_003374118.1 1031614 R 553190 CDS YP_003374119.1 283783365 8709617 complement(1033506..1034333) 1 NC_013721.1 identified by match to protein family HMM PF05116; match to protein family HMM PF08282; match to protein family HMM TIGR01484; HAD hydrolase, family IIB 1034333 8709617 HMPREF0424_0905 Gardnerella vaginalis 409-05 HAD hydrolase, family IIB YP_003374119.1 1033506 R 553190 CDS YP_003374120.1 283783366 8708853 complement(1034440..1034688) 1 NC_013721.1 identified by match to protein family HMM PF03840; match to protein family HMM TIGR00810; preprotein translocase subunit SecG 1034688 secG 8708853 secG Gardnerella vaginalis 409-05 preprotein translocase subunit SecG YP_003374120.1 1034440 R 553190 CDS YP_003374121.1 283783367 8709123 complement(1034741..1035538) 1 NC_013721.1 identified by match to protein family HMM PF00121; match to protein family HMM TIGR00419; triose-phosphate isomerase 1035538 tpiA 8709123 tpiA Gardnerella vaginalis 409-05 triose-phosphate isomerase YP_003374121.1 1034741 R 553190 CDS YP_003374122.1 283783368 8709067 complement(1035703..1036908) 1 NC_013721.1 identified by match to protein family HMM PF00162; phosphoglycerate kinase 1036908 pgk 8709067 pgk Gardnerella vaginalis 409-05 phosphoglycerate kinase YP_003374122.1 1035703 R 553190 CDS YP_003374123.1 283783369 8709973 complement(1037935..1038882) 1 NC_013721.1 identified by match to protein family HMM PF02650; match to protein family HMM TIGR00647; hypothetical protein 1038882 8709973 HMPREF0424_0909 Gardnerella vaginalis 409-05 hypothetical protein YP_003374123.1 1037935 R 553190 CDS YP_003374124.1 283783370 8709394 complement(1039156..1040115) 1 NC_013721.1 identified by match to protein family HMM PF03668; AAA ATPase 1040115 8709394 HMPREF0424_0910 Gardnerella vaginalis 409-05 AAA ATPase YP_003374124.1 1039156 R 553190 CDS YP_003374125.1 283783371 8708841 complement(1040112..1041305) 1 NC_013721.1 identified by match to protein family HMM PF08501; shikimate dehydrogenase substrate binding domain-containing protein 1041305 8708841 HMPREF0424_0911 Gardnerella vaginalis 409-05 shikimate dehydrogenase substrate binding domain-containing protein YP_003374125.1 1040112 R 553190 CDS YP_003374126.1 283783372 8709069 complement(1041328..1043748) 1 NC_013721.1 hypothetical protein 1043748 8709069 HMPREF0424_0912 Gardnerella vaginalis 409-05 hypothetical protein YP_003374126.1 1041328 R 553190 CDS YP_003374127.1 283783373 8709100 complement(1043821..1045038) 1 NC_013721.1 identified by match to protein family HMM PF00438; match to protein family HMM PF02772; match to protein family HMM PF02773; match to protein family HMM TIGR01034; methionine adenosyltransferase 1045038 metK 8709100 metK Gardnerella vaginalis 409-05 methionine adenosyltransferase YP_003374127.1 1043821 R 553190 CDS YP_003374128.1 283783374 8708903 complement(1045177..1045461) 1 NC_013721.1 identified by match to protein family HMM TIGR00690; DNA-directed RNA polymerase subunit omega 1045461 rpoZ 8708903 rpoZ Gardnerella vaginalis 409-05 DNA-directed RNA polymerase subunit omega YP_003374128.1 1045177 R 553190 CDS YP_003374129.1 283783375 8709613 complement(1045544..1046152) 1 NC_013721.1 identified by match to protein family HMM PF00625; match to protein family HMM TIGR03263; guanylate kinase 1046152 gmk 8709613 gmk Gardnerella vaginalis 409-05 guanylate kinase YP_003374129.1 1045544 R 553190 CDS YP_003374130.1 283783376 8709241 complement(1046168..1047079) 1 NC_013721.1 identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase 1047079 pyrF_1 8709241 pyrF_1 Gardnerella vaginalis 409-05 orotidine 5'-phosphate decarboxylase YP_003374130.1 1046168 R 553190 CDS YP_003374131.1 283783377 8709960 complement(1047083..1050478) 1 NC_013721.1 identified by match to protein family HMM PF00289; match to protein family HMM PF02142; match to protein family HMM PF02786; match to protein family HMM PF02787; match to protein family HMM TIGR01369; carbamoyl-phosphate synthase large subunit 1050478 carB 8709960 carB Gardnerella vaginalis 409-05 carbamoyl-phosphate synthase large subunit YP_003374131.1 1047083 R 553190 CDS YP_003374132.1 283783378 8709157 complement(1050511..1051722) 1 NC_013721.1 identified by match to protein family HMM PF00117; match to protein family HMM PF00988; match to protein family HMM TIGR01368; carbamoyl-phosphate synthase small subunit 1051722 carA 8709157 carA Gardnerella vaginalis 409-05 carbamoyl-phosphate synthase small subunit YP_003374132.1 1050511 R 553190 CDS YP_003374133.1 283783379 8709862 complement(1051809..1052291) 1 NC_013721.1 identified by match to protein family HMM PF01029; match to protein family HMM TIGR01951; transcription antitermination factor NusB 1052291 nusB 8709862 nusB Gardnerella vaginalis 409-05 transcription antitermination factor NusB YP_003374133.1 1051809 R 553190 CDS YP_003374134.1 283783380 8708918 complement(1052459..1053022) 1 NC_013721.1 identified by match to protein family HMM PF01132; match to protein family HMM PF08207; match to protein family HMM PF09285; match to protein family HMM TIGR00038; translation elongation factor P 1053022 efp 8708918 efp Gardnerella vaginalis 409-05 translation elongation factor P YP_003374134.1 1052459 R 553190 CDS YP_003374135.1 283783381 8708887 1053152..1053541 1 NC_013721.1 identified by match to protein family HMM PF03733; hypothetical protein 1053541 8708887 HMPREF0424_0922 Gardnerella vaginalis 409-05 hypothetical protein YP_003374135.1 1053152 D 553190 CDS YP_003374136.1 283783382 8709047 complement(1053517..1054209) 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR00336; orotate phosphoribosyltransferase 1054209 pyrE 8709047 pyrE Gardnerella vaginalis 409-05 orotate phosphoribosyltransferase YP_003374136.1 1053517 R 553190 CDS YP_003374137.1 283783383 8709427 complement(1054306..1055307) 1 NC_013721.1 identified by match to protein family HMM PF01180; match to protein family HMM TIGR01037; dihydroorotate dehydrogenase 1B 1055307 8709427 HMPREF0424_0923 Gardnerella vaginalis 409-05 dihydroorotate dehydrogenase 1B YP_003374137.1 1054306 R 553190 CDS YP_003374138.1 283783384 8709854 complement(1055313..1056209) 1 NC_013721.1 identified by match to protein family HMM PF00175; dihydroorotate dehydrogenase, electron transfer subunit 1056209 8709854 HMPREF0424_0924 Gardnerella vaginalis 409-05 dihydroorotate dehydrogenase, electron transfer subunit YP_003374138.1 1055313 R 553190 CDS YP_003374139.1 283783385 8709863 complement(1056304..1057347) 1 NC_013721.1 identified by match to protein family HMM PF00215; match to protein family HMM TIGR02127; orotidine 5'-phosphate decarboxylase 1057347 pyrF_2 8709863 pyrF_2 Gardnerella vaginalis 409-05 orotidine 5'-phosphate decarboxylase YP_003374139.1 1056304 R 553190 CDS YP_003374140.1 283783386 8709325 complement(1057382..1058794) 1 NC_013721.1 identified by match to protein family HMM PF01979; match to protein family HMM TIGR00857; dihydroorotase 1058794 8709325 HMPREF0424_0926 Gardnerella vaginalis 409-05 dihydroorotase YP_003374140.1 1057382 R 553190 CDS YP_003374141.1 283783387 8709869 complement(1058850..1060085) 1 NC_013721.1 identified by match to protein family HMM PF00185; match to protein family HMM PF02729; match to protein family HMM TIGR00670; aspartate carbamoyltransferase 1060085 pyrB 8709869 pyrB Gardnerella vaginalis 409-05 aspartate carbamoyltransferase YP_003374141.1 1058850 R 553190 CDS YP_003374142.1 283783388 8708967 complement(1060562..1060795) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1060795 8708967 HMPREF0424_0929 Gardnerella vaginalis 409-05 hypothetical protein YP_003374142.1 1060562 R 553190 CDS YP_003374143.1 283783389 8709246 complement(1060876..1064064) 1 NC_013721.1 identified by match to protein family HMM PF03710; [glutamate--ammonia-ligase] adenylyltransferase 1064064 glnE 8709246 glnE Gardnerella vaginalis 409-05 [glutamate--ammonia-ligase] adenylyltransferase YP_003374143.1 1060876 R 553190 CDS YP_003374144.1 283783390 8709954 complement(1064361..1071290) 1 NC_013721.1 identified by match to protein family HMM PF07554; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1071290 8709954 HMPREF0424_0931 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374144.1 1064361 R 553190 CDS YP_003374145.1 283783391 8709216 1071938..1072060 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1072060 8709216 HMPREF0424_0932 Gardnerella vaginalis 409-05 hypothetical protein YP_003374145.1 1071938 D 553190 CDS YP_003374146.1 283783392 8709936 complement(1072121..1072975) 1 NC_013721.1 identified by match to protein family HMM PF02219; match to protein family HMM TIGR00676; methylenetetrahydrofolate reductase 1072975 metF 8709936 metF Gardnerella vaginalis 409-05 methylenetetrahydrofolate reductase YP_003374146.1 1072121 R 553190 CDS YP_003374147.1 283783393 8708944 complement(1072979..1075333) 1 NC_013721.1 identified by match to protein family HMM PF01717; match to protein family HMM PF08267; match to protein family HMM TIGR01371; 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase 1075333 metE 8708944 metE Gardnerella vaginalis 409-05 5- methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase YP_003374147.1 1072979 R 553190 CDS YP_003374148.1 283783394 8709745 complement(1075923..1076480) 1 NC_013721.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 1076480 8709745 HMPREF0424_0935 Gardnerella vaginalis 409-05 phosphoglycerate mutase family protein YP_003374148.1 1075923 R 553190 CDS YP_003374149.1 283783395 8709959 complement(1076490..1077641) 1 NC_013721.1 identified by match to protein family HMM PF08704; tRNA methyltransferase complex GCD14 subunit 1077641 8709959 HMPREF0424_0936 Gardnerella vaginalis 409-05 tRNA methyltransferase complex GCD14 subunit YP_003374149.1 1076490 R 553190 CDS YP_003374150.1 283783396 8709235 complement(1077685..1078728) 1 NC_013721.1 identified by match to protein family HMM PF00814; match to protein family HMM TIGR00329; match to protein family HMM TIGR03723; glycoprotease GCP 1078728 8709235 HMPREF0424_0937 Gardnerella vaginalis 409-05 glycoprotease GCP YP_003374150.1 1077685 R 553190 CDS YP_003374151.1 283783397 8708879 complement(1078750..1079280) 1 NC_013721.1 identified by match to protein family HMM PF00583; match to protein family HMM TIGR01575; ribosomal-protein-alanine acetyltransferase 1079280 rimI 8708879 rimI Gardnerella vaginalis 409-05 ribosomal-protein-alanine acetyltransferase YP_003374151.1 1078750 R 553190 CDS YP_003374152.1 283783398 8709985 complement(1079306..1080133) 1 NC_013721.1 identified by match to protein family HMM PF00814; match to protein family HMM TIGR03725; hypothetical protein 1080133 yeaZ 8709985 yeaZ Gardnerella vaginalis 409-05 hypothetical protein YP_003374152.1 1079306 R 553190 CDS YP_003374153.1 283783399 8709318 complement(1080247..1080819) 1 NC_013721.1 identified by match to protein family HMM PF02367; match to protein family HMM TIGR00150; YjeE family ATPase 1080819 8709318 HMPREF0424_0940 Gardnerella vaginalis 409-05 YjeE family ATPase YP_003374153.1 1080247 R 553190 CDS YP_003374154.1 283783400 8709934 complement(1080891..1081937) 1 NC_013721.1 identified by match to protein family HMM PF06144; DNA polymerase III subunit delta 1081937 8709934 HMPREF0424_0941 Gardnerella vaginalis 409-05 DNA polymerase III subunit delta YP_003374154.1 1080891 R 553190 CDS YP_003374155.1 283783401 8709187 complement(1082006..1083694) 1 NC_013721.1 identified by match to protein family HMM PF03772; match to protein family HMM TIGR00360; ComEC/Rec2-like protein 1083694 8709187 HMPREF0424_0942 Gardnerella vaginalis 409-05 ComEC/Rec2-like protein YP_003374155.1 1082006 R 553190 CDS YP_003374156.1 283783402 8709756 complement(1083702..1084490) 1 NC_013721.1 identified by match to protein family HMM PF00633; match to protein family HMM TIGR00426; comEA protein 1084490 8709756 HMPREF0424_0943 Gardnerella vaginalis 409-05 comEA protein YP_003374156.1 1083702 R 553190 CDS YP_003374157.1 283783403 8708958 complement(1084873..1087857) 1 NC_013721.1 identified by match to protein family HMM PF08264; match to protein family HMM PF09334; match to protein family HMM TIGR00396; leucyl-tRNA synthetase 1087857 leuS 8708958 leuS Gardnerella vaginalis 409-05 leucyl-tRNA synthetase YP_003374157.1 1084873 R 553190 CDS YP_003374158.1 283783404 8709551 1088098..1088538 1 NC_013721.1 hypothetical protein 1088538 8709551 HMPREF0424_0945 Gardnerella vaginalis 409-05 hypothetical protein YP_003374158.1 1088098 D 553190 CDS YP_003374159.1 283783405 8709010 1088613..1089056 1 NC_013721.1 hypothetical protein 1089056 8709010 HMPREF0424_0946 Gardnerella vaginalis 409-05 hypothetical protein YP_003374159.1 1088613 D 553190 CDS YP_003374160.1 283783406 8709388 1089103..1089954 1 NC_013721.1 identified by match to protein family HMM PF03881; fructosamine kinase 1089954 8709388 HMPREF0424_0947 Gardnerella vaginalis 409-05 fructosamine kinase YP_003374160.1 1089103 D 553190 CDS YP_003374161.1 283783407 8709390 1090078..1091787 1 NC_013721.1 lipoprotein 1091787 8709390 HMPREF0424_0948 Gardnerella vaginalis 409-05 lipoprotein YP_003374161.1 1090078 D 553190 CDS YP_003374162.1 283783408 8709586 complement(1091901..1093712) 1 NC_013721.1 identified by match to protein family HMM PF00501; AMP-binding protein 1093712 8709586 HMPREF0424_0949 Gardnerella vaginalis 409-05 AMP-binding protein YP_003374162.1 1091901 R 553190 CDS YP_003374163.1 283783409 8709202 complement(1093855..1094472) 1 NC_013721.1 identified by match to protein family HMM PF01551; peptidase, M23 family 1094472 8709202 HMPREF0424_0950 Gardnerella vaginalis 409-05 peptidase, M23 family YP_003374163.1 1093855 R 553190 CDS YP_003374164.1 283783410 8710050 1094936..1095817 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1095817 8710050 HMPREF0424_0953 Gardnerella vaginalis 409-05 hypothetical protein YP_003374164.1 1094936 D 553190 CDS YP_003374165.1 283783411 8709734 complement(1095933..1097423) 1 NC_013721.1 identified by match to protein family HMM PF00324; lysine-specific permease 1097423 lysP 8709734 lysP Gardnerella vaginalis 409-05 lysine-specific permease YP_003374165.1 1095933 R 553190 CDS YP_003374166.1 283783412 8709346 1098195..1099166 1 NC_013721.1 identified by match to protein family HMM PF00589; site-specific recombinase, phage integrase family 1099166 8709346 HMPREF0424_0956 Gardnerella vaginalis 409-05 site-specific recombinase, phage integrase family YP_003374166.1 1098195 D 553190 CDS YP_003374167.1 283783413 8709908 complement(1099419..1100147) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1100147 8709908 HMPREF0424_0957 Gardnerella vaginalis 409-05 hypothetical protein YP_003374167.1 1099419 R 553190 CDS YP_003374168.1 283783414 8708856 complement(1100563..1100805) 1 NC_013721.1 identified by match to protein family HMM PF01381; DNA-binding protein 1100805 8708856 HMPREF0424_0958 Gardnerella vaginalis 409-05 DNA-binding protein YP_003374168.1 1100563 R 553190 CDS YP_003374169.1 283783415 8709667 1101012..1101245 1 NC_013721.1 hypothetical protein 1101245 8709667 HMPREF0424_0959 Gardnerella vaginalis 409-05 hypothetical protein YP_003374169.1 1101012 D 553190 CDS YP_003374170.1 283783416 8709690 1101364..1101546 1 NC_013721.1 hypothetical protein 1101546 8709690 HMPREF0424_0960 Gardnerella vaginalis 409-05 hypothetical protein YP_003374170.1 1101364 D 553190 CDS YP_003374171.1 283783417 8709486 1102004..1102279 1 NC_013721.1 hypothetical protein 1102279 8709486 HMPREF0424_0961 Gardnerella vaginalis 409-05 hypothetical protein YP_003374171.1 1102004 D 553190 CDS YP_003374172.1 283783418 8708761 complement(1102317..1102550) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1102550 8708761 HMPREF0424_0962 Gardnerella vaginalis 409-05 hypothetical protein YP_003374172.1 1102317 R 553190 CDS YP_003374173.1 283783419 8709628 1103135..1103347 1 NC_013721.1 identified by match to protein family HMM TIGR03544; DivIVA domain-containing protein 1103347 8709628 HMPREF0424_0963 Gardnerella vaginalis 409-05 DivIVA domain-containing protein YP_003374173.1 1103135 D 553190 CDS YP_003374174.1 283783420 8708991 1103756..1104034 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1104034 8708991 HMPREF0424_0964 Gardnerella vaginalis 409-05 hypothetical protein YP_003374174.1 1103756 D 553190 CDS YP_003374175.1 283783421 8709209 1104059..1104370 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1104370 8709209 HMPREF0424_0965 Gardnerella vaginalis 409-05 hypothetical protein YP_003374175.1 1104059 D 553190 CDS YP_003374176.1 283783422 8709963 1104684..1104890 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1104890 8709963 HMPREF0424_0966 Gardnerella vaginalis 409-05 hypothetical protein YP_003374176.1 1104684 D 553190 CDS YP_003374177.1 283783423 8709273 1104887..1105750 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1105750 8709273 HMPREF0424_0967 Gardnerella vaginalis 409-05 hypothetical protein YP_003374177.1 1104887 D 553190 CDS YP_003374178.1 283783424 8709901 1106435..1106602 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1106602 8709901 HMPREF0424_0968 Gardnerella vaginalis 409-05 hypothetical protein YP_003374178.1 1106435 D 553190 CDS YP_003374179.1 283783425 8709502 1106599..1106928 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1106928 8709502 HMPREF0424_0969 Gardnerella vaginalis 409-05 hypothetical protein YP_003374179.1 1106599 D 553190 CDS YP_003374180.1 283783426 8709707 1106925..1107329 1 NC_013721.1 hypothetical protein 1107329 8709707 HMPREF0424_0970 Gardnerella vaginalis 409-05 hypothetical protein YP_003374180.1 1106925 D 553190 CDS YP_003374181.1 283783427 8709649 1107971..1108639 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1108639 8709649 HMPREF0424_0971 Gardnerella vaginalis 409-05 hypothetical protein YP_003374181.1 1107971 D 553190 CDS YP_003374182.1 283783428 8709200 1109014..1109391 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1109391 8709200 HMPREF0424_0972 Gardnerella vaginalis 409-05 hypothetical protein YP_003374182.1 1109014 D 553190 CDS YP_003374183.1 283783429 8708794 1109381..1109647 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1109647 8708794 HMPREF0424_0973 Gardnerella vaginalis 409-05 hypothetical protein YP_003374183.1 1109381 D 553190 CDS YP_003374184.1 283783430 8709891 1109647..1109814 1 NC_013721.1 hypothetical protein 1109814 8709891 HMPREF0424_0974 Gardnerella vaginalis 409-05 hypothetical protein YP_003374184.1 1109647 D 553190 CDS YP_003374185.1 283783431 8709112 1109827..1110384 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1110384 8709112 HMPREF0424_0975 Gardnerella vaginalis 409-05 hypothetical protein YP_003374185.1 1109827 D 553190 CDS YP_003374186.1 283783432 8709807 complement(1110545..1110694) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1110694 8709807 HMPREF0424_0976 Gardnerella vaginalis 409-05 hypothetical protein YP_003374186.1 1110545 R 553190 CDS YP_003374187.1 283783433 8709492 complement(1111055..1111171) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1111171 8709492 HMPREF0424_0977 Gardnerella vaginalis 409-05 hypothetical protein YP_003374187.1 1111055 R 553190 CDS YP_003374188.1 283783434 8709381 complement(1111183..1111509) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1111509 8709381 HMPREF0424_0978 Gardnerella vaginalis 409-05 hypothetical protein YP_003374188.1 1111183 R 553190 CDS YP_003374189.1 283783435 8710006 complement(1111846..1112886) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1112886 8710006 HMPREF0424_0979 Gardnerella vaginalis 409-05 hypothetical protein YP_003374189.1 1111846 R 553190 CDS YP_003374190.1 283783436 8709193 complement(1112924..1113493) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1113493 8709193 HMPREF0424_0980 Gardnerella vaginalis 409-05 hypothetical protein YP_003374190.1 1112924 R 553190 CDS YP_003374191.1 283783437 8709568 1115133..1115657 1 NC_013721.1 hypothetical protein 1115657 8709568 HMPREF0424_0981 Gardnerella vaginalis 409-05 hypothetical protein YP_003374191.1 1115133 D 553190 CDS YP_003374192.1 283783438 8709447 1115650..1116777 1 NC_013721.1 hypothetical protein 1116777 8709447 HMPREF0424_0982 Gardnerella vaginalis 409-05 hypothetical protein YP_003374192.1 1115650 D 553190 CDS YP_003374193.1 283783439 8708896 1116825..1117433 1 NC_013721.1 hypothetical protein 1117433 8708896 HMPREF0424_0983 Gardnerella vaginalis 409-05 hypothetical protein YP_003374193.1 1116825 D 553190 CDS YP_003374194.1 283783440 8709289 1117430..1118806 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1118806 8709289 HMPREF0424_0984 Gardnerella vaginalis 409-05 hypothetical protein YP_003374194.1 1117430 D 553190 CDS YP_003374195.1 283783441 8709806 1118796..1119941 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1119941 8709806 HMPREF0424_0985 Gardnerella vaginalis 409-05 hypothetical protein YP_003374195.1 1118796 D 553190 CDS YP_003374196.1 283783442 8709744 1119969..1120592 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1120592 8709744 HMPREF0424_0986 Gardnerella vaginalis 409-05 hypothetical protein YP_003374196.1 1119969 D 553190 CDS YP_003374197.1 283783443 8708791 1120610..1121464 1 NC_013721.1 hypothetical protein 1121464 8708791 HMPREF0424_0987 Gardnerella vaginalis 409-05 hypothetical protein YP_003374197.1 1120610 D 553190 CDS YP_003374198.1 283783444 8709515 1121467..1122045 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1122045 8709515 HMPREF0424_0988 Gardnerella vaginalis 409-05 hypothetical protein YP_003374198.1 1121467 D 553190 CDS YP_003374199.1 283783445 8709506 1122042..1122506 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1122506 8709506 HMPREF0424_0989 Gardnerella vaginalis 409-05 hypothetical protein YP_003374199.1 1122042 D 553190 CDS YP_003374200.1 283783446 8708942 1122493..1122864 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1122864 8708942 HMPREF0424_0990 Gardnerella vaginalis 409-05 hypothetical protein YP_003374200.1 1122493 D 553190 CDS YP_003374201.1 283783447 8709659 1122861..1123262 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1123262 8709659 HMPREF0424_0991 Gardnerella vaginalis 409-05 hypothetical protein YP_003374201.1 1122861 D 553190 CDS YP_003374202.1 283783448 8709762 1123271..1123852 1 NC_013721.1 hypothetical protein 1123852 8709762 HMPREF0424_0992 Gardnerella vaginalis 409-05 hypothetical protein YP_003374202.1 1123271 D 553190 CDS YP_003374203.1 283783449 8709694 1123995..1124495 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1124495 8709694 HMPREF0424_0993 Gardnerella vaginalis 409-05 hypothetical protein YP_003374203.1 1123995 D 553190 CDS YP_003374204.1 283783450 8708969 1124861..1128382 1 NC_013721.1 identified by match to protein family HMM TIGR01760; phage tail tape measure protein, TP901 family 1128382 8708969 HMPREF0424_0994 Gardnerella vaginalis 409-05 phage tail tape measure protein, TP901 family YP_003374204.1 1124861 D 553190 CDS YP_003374205.1 283783451 8709376 1128386..1129135 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1129135 8709376 HMPREF0424_0995 Gardnerella vaginalis 409-05 hypothetical protein YP_003374205.1 1128386 D 553190 CDS YP_003374206.1 283783452 8709684 1131889..1132086 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1132086 8709684 HMPREF0424_0998 Gardnerella vaginalis 409-05 hypothetical protein YP_003374206.1 1131889 D 553190 CDS YP_003374207.1 283783453 8709055 1132076..1132222 1 NC_013721.1 hypothetical protein 1132222 8709055 HMPREF0424_0999 Gardnerella vaginalis 409-05 hypothetical protein YP_003374207.1 1132076 D 553190 CDS YP_003374208.1 283783454 8709173 1132215..1134185 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1134185 8709173 HMPREF0424_1000 Gardnerella vaginalis 409-05 hypothetical protein YP_003374208.1 1132215 D 553190 CDS YP_003374209.1 283783455 8709546 1134195..1134887 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1134887 8709546 HMPREF0424_1001 Gardnerella vaginalis 409-05 hypothetical protein YP_003374209.1 1134195 D 553190 CDS YP_003374210.1 283783456 8709337 1135477..1136472 1 NC_013721.1 identified by match to protein family HMM PF01183; glycosyl hydrolase family 25 1136472 8709337 HMPREF0424_1002 Gardnerella vaginalis 409-05 glycosyl hydrolase family 25 YP_003374210.1 1135477 D 553190 CDS YP_003374211.1 283783457 8709764 1136492..1136968 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1136968 8709764 HMPREF0424_1003 Gardnerella vaginalis 409-05 hypothetical protein YP_003374211.1 1136492 D 553190 CDS YP_003374212.1 283783458 8709770 complement(1137063..1137212) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1137212 8709770 HMPREF0424_1004 Gardnerella vaginalis 409-05 hypothetical protein YP_003374212.1 1137063 R 553190 CDS YP_003374213.1 283783459 8710067 complement(1137466..1138542) 1 NC_013721.1 hypothetical protein 1138542 8710067 HMPREF0424_1006 Gardnerella vaginalis 409-05 hypothetical protein YP_003374213.1 1137466 R 553190 CDS YP_003374214.1 283783460 8709776 complement(1138733..1139740) 1 NC_013721.1 identified by match to protein family HMM PF00892; hypothetical protein 1139740 8709776 HMPREF0424_1007 Gardnerella vaginalis 409-05 hypothetical protein YP_003374214.1 1138733 R 553190 CDS YP_003374215.1 283783461 8709541 1140086..1140490 1 NC_013721.1 identified by match to protein family HMM PF01243; pyridoxamine 5'-phosphate oxidase family protein 1140490 8709541 HMPREF0424_1008 Gardnerella vaginalis 409-05 pyridoxamine 5'-phosphate oxidase family protein YP_003374215.1 1140086 D 553190 CDS YP_003374216.1 283783462 8709913 complement(1140805..1141254) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1141254 8709913 HMPREF0424_1009 Gardnerella vaginalis 409-05 hypothetical protein YP_003374216.1 1140805 R 553190 CDS YP_003374217.1 283783463 8709556 complement(1141366..1141875) 1 NC_013721.1 identified by match to protein family HMM PF04397; LytTr DNA-binding domain-containing protein 1141875 8709556 HMPREF0424_1010 Gardnerella vaginalis 409-05 LytTr DNA-binding domain-containing protein YP_003374217.1 1141366 R 553190 CDS YP_003374218.1 283783464 8709015 complement(1142014..1142832) 1 NC_013721.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 1142832 8709015 HMPREF0424_1011 Gardnerella vaginalis 409-05 phosphoglycerate mutase family protein YP_003374218.1 1142014 R 553190 CDS YP_003374219.1 283783465 8709928 complement(1142857..1143279) 1 NC_013721.1 identified by match to protein family HMM PF02410; match to protein family HMM TIGR00090; iojap family protein 1143279 8709928 HMPREF0424_1012 Gardnerella vaginalis 409-05 iojap family protein YP_003374219.1 1142857 R 553190 CDS YP_003374220.1 283783466 8709189 complement(1143316..1144725) 1 NC_013721.1 identified by match to protein family HMM PF00483; match to protein family HMM PF01128; match to protein family HMM TIGR01173; UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase 1144725 glmU 8709189 glmU Gardnerella vaginalis 409-05 UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase YP_003374220.1 1143316 R 553190 CDS YP_003374221.1 283783467 8710047 complement(1145002..1146036) 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase 1146036 prs_1 8710047 prs_1 Gardnerella vaginalis 409-05 ribose-phosphate diphosphokinase YP_003374221.1 1145002 R 553190 CDS YP_003374222.1 283783468 8709708 complement(1146121..1146933) 1 NC_013721.1 identified by match to protein family HMM PF01467; match to protein family HMM TIGR00125; match to protein family HMM TIGR00482; nicotinate-nucleotide adenylyltransferase 1146933 nadD 8709708 nadD Gardnerella vaginalis 409-05 nicotinate-nucleotide adenylyltransferase YP_003374222.1 1146121 R 553190 CDS YP_003374223.1 283783469 8708808 complement(1146923..1147441) 1 NC_013721.1 hypothetical protein 1147441 8708808 HMPREF0424_1017 Gardnerella vaginalis 409-05 hypothetical protein YP_003374223.1 1146923 R 553190 CDS YP_003374224.1 283783470 8710000 complement(1147480..1148757) 1 NC_013721.1 identified by match to protein family HMM PF00171; match to protein family HMM TIGR00407; glutamate-5-semialdehyde dehydrogenase 1148757 proA 8710000 proA Gardnerella vaginalis 409-05 glutamate-5-semialdehyde dehydrogenase YP_003374224.1 1147480 R 553190 CDS YP_003374225.1 283783471 8709574 1148957..1150483 1 NC_013721.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR00260; threonine synthase 1150483 thrC 8709574 thrC Gardnerella vaginalis 409-05 threonine synthase YP_003374225.1 1148957 D 553190 CDS YP_003374226.1 283783472 8708964 complement(1150543..1151211) 1 NC_013721.1 identified by match to protein family HMM PF02631; regulatory protein RecX 1151211 recX 8708964 recX Gardnerella vaginalis 409-05 regulatory protein RecX YP_003374226.1 1150543 R 553190 CDS YP_003374227.1 283783473 8709142 complement(1151243..1152382) 1 NC_013721.1 identified by match to protein family HMM PF00154; match to protein family HMM TIGR02012; recombinase A 1152382 recA 8709142 recA Gardnerella vaginalis 409-05 recombinase A YP_003374227.1 1151243 R 553190 CDS YP_003374228.1 283783474 8709851 complement(1152588..1153319) 1 NC_013721.1 identified by match to protein family HMM PF02464; match to protein family HMM TIGR00199; competence/damage-inducible protein CinA C-terminal domain-containing protein 1153319 8709851 HMPREF0424_1022 Gardnerella vaginalis 409-05 competence/damage-inducible protein CinA C-terminal domain-containing protein YP_003374228.1 1152588 R 553190 CDS YP_003374229.1 283783475 8710012 complement(1153389..1154069) 1 NC_013721.1 identified by match to protein family HMM PF01066; match to protein family HMM TIGR00560; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 1154069 pgsA 8710012 pgsA Gardnerella vaginalis 409-05 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase YP_003374229.1 1153389 R 553190 CDS YP_003374230.1 283783476 8709285 complement(1154151..1156850) 1 NC_013721.1 identified by match to protein family HMM PF01580; match to protein family HMM PF09397; FtsK/SpoIIIE family protein 1156850 8709285 HMPREF0424_1024 Gardnerella vaginalis 409-05 FtsK/SpoIIIE family protein YP_003374230.1 1154151 R 553190 CDS YP_003374231.1 283783477 8709996 complement(1157067..1158080) 1 NC_013721.1 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 1158080 8709996 HMPREF0424_1025 Gardnerella vaginalis 409-05 sortase family protein YP_003374231.1 1157067 R 553190 CDS YP_003374232.1 283783478 8709053 complement(1158170..1159864) 1 NC_013721.1 identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1159864 8709053 HMPREF0424_1026 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374232.1 1158170 R 553190 CDS YP_003374233.1 283783479 8709460 complement(1160098..1163808) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1163808 8709460 HMPREF0424_1027 Gardnerella vaginalis 409-05 hypothetical protein YP_003374233.1 1160098 R 553190 CDS YP_003374234.1 283783480 8710076 1164486..1165769 1 NC_013721.1 identified by match to protein family HMM PF01071; match to protein family HMM PF02222; phosphoribosylglycinamide synthetase 1165769 8710076 HMPREF0424_1029 Gardnerella vaginalis 409-05 phosphoribosylglycinamide synthetase YP_003374234.1 1164486 D 553190 CDS YP_003374235.1 283783481 8708803 1165945..1166727 1 NC_013721.1 identified by match to protein family HMM PF01259; match to protein family HMM TIGR00081; phosphoribosylaminoimidazole succinocarboxamide synthase 1166727 purC 8708803 purC Gardnerella vaginalis 409-05 phosphoribosylaminoimidazole succinocarboxamide synthase YP_003374235.1 1165945 D 553190 CDS YP_003374236.1 283783482 8709341 1166870..1170625 1 NC_013721.1 identified by match to protein family HMM PF02769; match to protein family HMM TIGR01857; phosphoribosylformylglycinamidine synthase 1170625 8709341 HMPREF0424_1031 Gardnerella vaginalis 409-05 phosphoribosylformylglycinamidine synthase YP_003374236.1 1166870 D 553190 CDS YP_003374237.1 283783483 8709126 1170709..1172196 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM PF00310; match to protein family HMM TIGR01134; amidophosphoribosyltransferase 1172196 purF 8709126 purF Gardnerella vaginalis 409-05 amidophosphoribosyltransferase YP_003374237.1 1170709 D 553190 CDS YP_003374238.1 283783484 8709867 1172277..1173311 1 NC_013721.1 identified by match to protein family HMM PF00586; match to protein family HMM PF02769; match to protein family HMM TIGR00878; phosphoribosylformylglycinamidine cyclo-ligase 1173311 purM 8709867 purM Gardnerella vaginalis 409-05 phosphoribosylformylglycinamidine cyclo-ligase YP_003374238.1 1172277 D 553190 CDS YP_003374239.1 283783485 8709892 1173391..1174662 1 NC_013721.1 identified by match to protein family HMM PF01071; match to protein family HMM PF02655; match to protein family HMM PF02843; match to protein family HMM PF02844; match to protein family HMM TIGR00877; phosphoribosylamine--glycine ligase 1174662 purD 8709892 purD Gardnerella vaginalis 409-05 phosphoribosylamine--glycine ligase YP_003374239.1 1173391 D 553190 CDS YP_003374240.1 283783486 8709339 complement(1174779..1176848) 1 NC_013721.1 identified by match to protein family HMM PF00884; arylsulfatase 1176848 8709339 HMPREF0424_1035 Gardnerella vaginalis 409-05 arylsulfatase YP_003374240.1 1174779 R 553190 CDS YP_003374241.1 283783487 8710002 1177159..1178538 1 NC_013721.1 hypothetical protein 1178538 8710002 HMPREF0424_1036 Gardnerella vaginalis 409-05 hypothetical protein YP_003374241.1 1177159 D 553190 CDS YP_003374242.1 283783488 8709803 1178645..1181203 1 NC_013721.1 identified by match to protein family HMM PF04329; match to protein family HMM PF04330; hypothetical protein 1181203 8709803 HMPREF0424_1037 Gardnerella vaginalis 409-05 hypothetical protein YP_003374242.1 1178645 D 553190 CDS YP_003374243.1 283783489 8708947 1181284..1181781 1 NC_013721.1 identified by match to protein family HMM PF00731; match to protein family HMM TIGR01162; phosphoribosylaminoimidazole carboxylase catalytic subunit 1181781 purE 8708947 purE Gardnerella vaginalis 409-05 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_003374243.1 1181284 D 553190 CDS YP_003374244.1 283783490 8709661 1181765..1182937 1 NC_013721.1 identified by match to protein family HMM PF02222; match to protein family HMM TIGR01161; phosphoribosylaminoimidazole carboxylase ATPase subunit 1182937 purK 8709661 purK Gardnerella vaginalis 409-05 phosphoribosylaminoimidazole carboxylase ATPase subunit YP_003374244.1 1181765 D 553190 CDS YP_003374245.1 283783491 8709530 1182958..1183362 1 NC_013721.1 identified by match to protein family HMM PF01475; Fur family transcriptional regulator 1183362 8709530 HMPREF0424_1040 Gardnerella vaginalis 409-05 Fur family transcriptional regulator YP_003374245.1 1182958 D 553190 CDS YP_003374246.1 283783492 8710058 complement(1183640..1184836) 1 NC_013721.1 identified by match to protein family HMM PF03600; citrate transporter 1184836 8710058 HMPREF0424_1042 Gardnerella vaginalis 409-05 citrate transporter YP_003374246.1 1183640 R 553190 CDS YP_003374247.1 283783493 8709355 1185089..1186840 1 NC_013721.1 identified by match to protein family HMM PF00205; match to protein family HMM PF02775; match to protein family HMM PF02776; acetolactate synthase 1186840 8709355 HMPREF0424_1043 Gardnerella vaginalis 409-05 acetolactate synthase YP_003374247.1 1185089 D 553190 CDS YP_003374248.1 283783494 8709761 complement(1186974..1187939) 1 NC_013721.1 identified by match to protein family HMM PF01156; inosine-uridine preferring nucleoside hydrolase 1187939 8709761 HMPREF0424_1044 Gardnerella vaginalis 409-05 inosine-uridine preferring nucleoside hydrolase YP_003374248.1 1186974 R 553190 CDS YP_003374249.1 283783495 8709584 1188198..1188809 1 NC_013721.1 hypothetical protein 1188809 8709584 HMPREF0424_1045 Gardnerella vaginalis 409-05 hypothetical protein YP_003374249.1 1188198 D 553190 CDS YP_003374250.1 283783496 8708973 1188864..1189670 1 NC_013721.1 identified by match to protein family HMM PF02361; cobalt transport protein 1189670 8708973 HMPREF0424_1046 Gardnerella vaginalis 409-05 cobalt transport protein YP_003374250.1 1188864 D 553190 CDS YP_003374251.1 283783497 8708798 1190492..1191337 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1191337 8708798 HMPREF0424_1048 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374251.1 1190492 D 553190 CDS YP_003374252.1 283783498 8709623 complement(1191384..1194518) 1 NC_013721.1 identified by match to protein family HMM PF01074; match to protein family HMM PF07748; match to protein family HMM PF09261; glycosyl hydrolase domain-containing protein 1194518 8709623 HMPREF0424_1049 Gardnerella vaginalis 409-05 glycosyl hydrolase domain-containing protein YP_003374252.1 1191384 R 553190 CDS YP_003374253.1 283783499 8708989 complement(1194609..1196765) 1 NC_013721.1 identified by match to protein family HMM PF01751; match to protein family HMM PF01807; match to protein family HMM PF08275; match to protein family HMM TIGR01391; DNA primase 1196765 dnaG 8708989 dnaG Gardnerella vaginalis 409-05 DNA primase YP_003374253.1 1194609 R 553190 CDS YP_003374254.1 283783500 8709420 complement(1196759..1198042) 1 NC_013721.1 identified by match to protein family HMM PF01966; match to protein family HMM TIGR01353; dGTPase 1198042 8709420 HMPREF0424_1051 Gardnerella vaginalis 409-05 dGTPase YP_003374254.1 1196759 R 553190 CDS YP_003374255.1 283783501 8708886 complement(1198105..1199484) 1 NC_013721.1 identified by match to protein family HMM PF00842; match to protein family HMM PF01168; match to protein family HMM TIGR00492; alanine racemase 1199484 alr 8708886 alr Gardnerella vaginalis 409-05 alanine racemase YP_003374255.1 1198105 R 553190 CDS YP_003374256.1 283783502 8709297 complement(1199570..1200109) 1 NC_013721.1 hypothetical protein 1200109 8709297 HMPREF0424_1053 Gardnerella vaginalis 409-05 hypothetical protein YP_003374256.1 1199570 R 553190 CDS YP_003374257.1 283783503 8709993 complement(1200164..1200658) 1 NC_013721.1 identified by match to protein family HMM PF02664; S-ribosylhomocysteinase 1200658 luxS 8709993 luxS Gardnerella vaginalis 409-05 S-ribosylhomocysteinase YP_003374257.1 1200164 R 553190 CDS YP_003374258.1 283783504 8709054 complement(1200775..1202457) 1 NC_013721.1 identified by match to protein family HMM PF00005; phosphonate C-P lyase system protein PhnK 1202457 8709054 HMPREF0424_1055 Gardnerella vaginalis 409-05 phosphonate C-P lyase system protein PhnK YP_003374258.1 1200775 R 553190 CDS YP_003374259.1 283783505 8709748 complement(1202454..1203338) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1203338 8709748 HMPREF0424_1056 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374259.1 1202454 R 553190 CDS YP_003374260.1 283783506 8708885 complement(1203381..1204346) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1204346 8708885 HMPREF0424_1057 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374260.1 1203381 R 553190 CDS YP_003374261.1 283783507 8709360 complement(1204566..1206257) 1 NC_013721.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 1206257 8709360 HMPREF0424_1058 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374261.1 1204566 R 553190 CDS YP_003374262.1 283783508 8708829 1206708..1207646 1 NC_013721.1 identified by match to protein family HMM PF01680; match to protein family HMM PF05690; match to protein family HMM TIGR00343; pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 1207646 8708829 HMPREF0424_1059 Gardnerella vaginalis 409-05 pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 YP_003374262.1 1206708 D 553190 CDS YP_003374263.1 283783509 8709509 1207649..1208242 1 NC_013721.1 identified by match to protein family HMM PF01174; match to protein family HMM PF07685; match to protein family HMM TIGR03800; pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 1208242 pdxT 8709509 pdxT Gardnerella vaginalis 409-05 pyridoxal 5'-phosphate synthase, glutaminase subunit Pdx2 YP_003374263.1 1207649 D 553190 CDS YP_003374264.1 283783510 8709050 1208628..1208954 1 NC_013721.1 identified by match to protein family HMM PF04221; match to protein family HMM TIGR02384; toxin-antitoxin system, antitoxin component 1208954 8709050 HMPREF0424_1061 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component YP_003374264.1 1208628 D 553190 CDS YP_003374265.1 283783511 8709441 complement(1209370..1213053) 1 NC_013721.1 identified by match to protein family HMM PF03382; match to protein family HMM TIGR02167; LPXTG-motif cell wall anchor domain-containing protein 1213053 8709441 HMPREF0424_1062 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374265.1 1209370 R 553190 CDS YP_003374266.1 283783512 8709081 complement(1213245..1214012) 1 NC_013721.1 identified by match to protein family HMM PF03309; match to protein family HMM TIGR00671; pantothenate kinase 1214012 8709081 HMPREF0424_1063 Gardnerella vaginalis 409-05 pantothenate kinase YP_003374266.1 1213245 R 553190 CDS YP_003374267.1 283783513 8709615 complement(1214195..1215637) 1 NC_013721.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1215637 8709615 HMPREF0424_1064 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374267.1 1214195 R 553190 CDS YP_003374268.1 283783514 8709221 complement(1215672..1217579) 1 NC_013721.1 identified by match to protein family HMM PF00310; match to protein family HMM PF01380; match to protein family HMM TIGR01135; glutamine-fructose-6-phosphate transaminase 1217579 glmS 8709221 glmS Gardnerella vaginalis 409-05 glutamine-fructose-6-phosphate transaminase YP_003374268.1 1215672 R 553190 CDS YP_003374269.1 283783515 8709976 complement(1217675..1218463) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1218463 8709976 HMPREF0424_1066 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374269.1 1217675 R 553190 CDS YP_003374270.1 283783516 8709239 complement(1218548..1219549) 1 NC_013721.1 identified by match to protein family HMM PF00528; match to protein family HMM TIGR01726; ABC transporter permease 1219549 8709239 HMPREF0424_1067 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374270.1 1218548 R 553190 CDS YP_003374271.1 283783517 8709452 complement(1219694..1220602) 1 NC_013721.1 identified by match to protein family HMM PF00497; extracellular solute-binding protein 1220602 8709452 HMPREF0424_1068 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374271.1 1219694 R 553190 CDS YP_003374272.1 283783518 8709902 complement(1220879..1221376) 1 NC_013721.1 identified by match to protein family HMM PF01668; match to protein family HMM TIGR00086; SsrA-binding protein 1221376 smpB 8709902 smpB Gardnerella vaginalis 409-05 SsrA-binding protein YP_003374272.1 1220879 R 553190 CDS YP_003374273.1 283783519 8709103 complement(1221510..1222916) 1 NC_013721.1 identified by match to protein family HMM PF05257; CHAP domain-containing protein 1222916 8709103 HMPREF0424_1070 Gardnerella vaginalis 409-05 CHAP domain-containing protein YP_003374273.1 1221510 R 553190 CDS YP_003374274.1 283783520 8709653 complement(1223063..1223986) 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1223986 8709653 HMPREF0424_1071 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003374274.1 1223063 R 553190 CDS YP_003374275.1 283783521 8708953 complement(1223986..1225449) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR02673; cell division ATP-binding protein FtsE 1225449 ftsE 8708953 ftsE Gardnerella vaginalis 409-05 cell division ATP-binding protein FtsE YP_003374275.1 1223986 R 553190 CDS YP_003374276.1 283783522 8709497 complement(1225513..1226649) 1 NC_013721.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00020; peptide chain release factor 2 1226649 prfB 8709497 prfB Gardnerella vaginalis 409-05 peptide chain release factor 2 YP_003374276.1 1225513 R 553190 CDS YP_003374277.1 283783523 8708811 complement(1226730..1227503) 1 NC_013721.1 identified by match to protein family HMM PF00557; match to protein family HMM TIGR00500; methionine aminopeptidase 1227503 map 8708811 map Gardnerella vaginalis 409-05 methionine aminopeptidase YP_003374277.1 1226730 R 553190 CDS YP_003374278.1 283783524 8709260 1227595..1229730 1 NC_013721.1 identified by match to protein family HMM PF01431; match to protein family HMM PF05649; peptidase family M13 1229730 8709260 HMPREF0424_1075 Gardnerella vaginalis 409-05 peptidase family M13 YP_003374278.1 1227595 D 553190 CDS YP_003374279.1 283783525 8709813 1231192..1231677 1 NC_013721.1 identified by match to protein family HMM PF00436; match to protein family HMM TIGR00621; ssDNA-binding protein 1231677 8709813 HMPREF0424_1076 Gardnerella vaginalis 409-05 ssDNA-binding protein YP_003374279.1 1231192 D 553190 CDS YP_003374280.1 283783526 8709369 complement(1231762..1232307) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1232307 8709369 HMPREF0424_1077 Gardnerella vaginalis 409-05 hypothetical protein YP_003374280.1 1231762 R 553190 CDS YP_003374281.1 283783527 8709789 complement(1232475..1233437) 1 NC_013721.1 hypothetical protein 1233437 8709789 HMPREF0424_1078 Gardnerella vaginalis 409-05 hypothetical protein YP_003374281.1 1232475 R 553190 CDS YP_003374282.1 283783528 8709380 complement(1234123..1235955) 1 NC_013721.1 identified by match to protein family HMM PF00587; match to protein family HMM PF03129; match to protein family HMM TIGR00409; proline--tRNA ligase 1235955 proS 8709380 proS Gardnerella vaginalis 409-05 proline--tRNA ligase YP_003374282.1 1234123 R 553190 CDS YP_003374283.1 283783529 8708957 complement(1236118..1237575) 1 NC_013721.1 hypothetical protein 1237575 8708957 HMPREF0424_1080 Gardnerella vaginalis 409-05 hypothetical protein YP_003374283.1 1236118 R 553190 CDS YP_003374284.1 283783530 8709210 complement(1237633..1238340) 1 NC_013721.1 identified by match to protein family HMM PF00929; exonuclease 1238340 8709210 HMPREF0424_1081 Gardnerella vaginalis 409-05 exonuclease YP_003374284.1 1237633 R 553190 CDS YP_003374285.1 283783531 8708905 complement(1238495..1240039) 1 NC_013721.1 identified by match to protein family HMM PF00478; match to protein family HMM PF00571; match to protein family HMM TIGR01302; inosine-5'-monophosphate dehydrogenase 1240039 guaB 8708905 guaB Gardnerella vaginalis 409-05 inosine-5'-monophosphate dehydrogenase YP_003374285.1 1238495 R 553190 CDS YP_003374286.1 283783532 8709597 complement(1240277..1241380) 1 NC_013721.1 identified by match to protein family HMM PF00953; glycosyltransferase family protein 1241380 8709597 HMPREF0424_1083 Gardnerella vaginalis 409-05 glycosyltransferase family protein YP_003374286.1 1240277 R 553190 CDS YP_003374287.1 283783533 8709268 complement(1241508..1242194) 1 NC_013721.1 identified by match to protein family HMM PF01300; match to protein family HMM TIGR00057; Sua5/YciO/YrdC/YwlC family protein 1242194 8709268 HMPREF0424_1084 Gardnerella vaginalis 409-05 Sua5/YciO/YrdC/YwlC family protein YP_003374287.1 1241508 R 553190 CDS YP_003374288.1 283783534 8709958 complement(1242308..1243222) 1 NC_013721.1 identified by match to protein family HMM PF03602; match to protein family HMM PF05175; match to protein family HMM TIGR00536; match to protein family HMM TIGR03534; protein-(glutamine-N5) methyltransferase 1243222 prmC 8709958 prmC Gardnerella vaginalis 409-05 protein-(glutamine-N5) methyltransferase YP_003374288.1 1242308 R 553190 CDS YP_003374289.1 283783535 8709783 complement(1243262..1244359) 1 NC_013721.1 identified by match to protein family HMM PF00472; match to protein family HMM PF03462; match to protein family HMM TIGR00019; peptide chain release factor 1 1244359 prfA 8709783 prfA Gardnerella vaginalis 409-05 peptide chain release factor 1 YP_003374289.1 1243262 R 553190 CDS YP_003374290.1 283783536 8709110 complement(1244499..1244711) 1 NC_013721.1 identified by match to protein family HMM PF01197; match to protein family HMM TIGR00105; 50S ribosomal protein L31 1244711 rpmE 8709110 rpmE Gardnerella vaginalis 409-05 50S ribosomal protein L31 YP_003374290.1 1244499 R 553190 CDS YP_003374291.1 283783537 8710079 complement(1254476..1255489) 1 NC_013721.1 identified by match to protein family HMM PF01715; match to protein family HMM TIGR00174; tRNA isopentenyltransferase 1255489 miaA 8710079 miaA Gardnerella vaginalis 409-05 tRNA isopentenyltransferase YP_003374291.1 1254476 R 553190 CDS YP_003374292.1 283783538 8709408 1255632..1256441 1 NC_013721.1 identified by match to protein family HMM PF04607; RelA/SpoT domain-containing protein 1256441 8709408 HMPREF0424_1091 Gardnerella vaginalis 409-05 RelA/SpoT domain-containing protein YP_003374292.1 1255632 D 553190 CDS YP_003374293.1 283783539 8709995 1256626..1257372 1 NC_013721.1 identified by match to protein family HMM PF01027; hypothetical protein 1257372 8709995 HMPREF0424_1092 Gardnerella vaginalis 409-05 hypothetical protein YP_003374293.1 1256626 D 553190 CDS YP_003374294.1 283783540 8708869 complement(1257817..1257954) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1257954 8708869 HMPREF0424_1093 Gardnerella vaginalis 409-05 hypothetical protein YP_003374294.1 1257817 R 553190 CDS YP_003374295.1 283783541 8709395 complement(1258028..1259227) 1 NC_013721.1 elongation factor Tu domain-containing protein 1259227 8709395 HMPREF0424_1094 Gardnerella vaginalis 409-05 elongation factor Tu domain-containing protein YP_003374295.1 1258028 R 553190 CDS YP_003374296.1 283783542 8709039 1258424..1259254 1 NC_013721.1 hypothetical protein 1259254 8709039 HMPREF0424_1095 Gardnerella vaginalis 409-05 hypothetical protein YP_003374296.1 1258424 D 553190 CDS YP_003374297.1 283783543 8709550 complement(1259396..1261525) 1 NC_013721.1 identified by match to protein family HMM PF00009; match to protein family HMM PF00679; match to protein family HMM PF03144; match to protein family HMM PF03764; match to protein family HMM TIGR00231; match to protein family HMM TIGR00484; translation elongation factor G 1261525 fusA 8709550 fusA Gardnerella vaginalis 409-05 translation elongation factor G YP_003374297.1 1259396 R 553190 CDS YP_003374298.1 283783544 8708888 complement(1261568..1262038) 1 NC_013721.1 identified by match to protein family HMM PF00177; match to protein family HMM TIGR01029; 30S ribosomal protein S7 1262038 rpsG 8708888 rpsG Gardnerella vaginalis 409-05 30S ribosomal protein S7 YP_003374298.1 1261568 R 553190 CDS YP_003374299.1 283783545 8709431 complement(1262042..1262413) 1 NC_013721.1 identified by match to protein family HMM PF00164; match to protein family HMM TIGR00981; 30S ribosomal protein S12 1262413 rpsL 8709431 rpsL Gardnerella vaginalis 409-05 30S ribosomal protein S12 YP_003374299.1 1262042 R 553190 CDS YP_003374300.1 283783546 8709111 complement(1262681..1263919) 1 NC_013721.1 identified by match to protein family HMM PF08478; POTRA domain-containing protein 1263919 ftsQ 8709111 ftsQ Gardnerella vaginalis 409-05 POTRA domain-containing protein YP_003374300.1 1262681 R 553190 CDS YP_003374301.1 283783547 8709953 complement(1263972..1265534) 1 NC_013721.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01082; UDP-N-acetylmuramate--L-alanine ligase 1265534 murC 8709953 murC Gardnerella vaginalis 409-05 UDP-N-acetylmuramate--L-alanine ligase YP_003374301.1 1263972 R 553190 CDS YP_003374302.1 283783548 8709591 complement(1265534..1266733) 1 NC_013721.1 identified by match to protein family HMM PF03033; match to protein family HMM PF04101; UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase 1266733 8709591 HMPREF0424_1101 Gardnerella vaginalis 409-05 UDP diphospho-muramoyl pentapeptide beta-N acetylglucosaminyl transferase YP_003374302.1 1265534 R 553190 CDS YP_003374303.1 283783549 8709830 complement(1266784..1268445) 1 NC_013721.1 identified by match to protein family HMM PF01098; cell division protein FtsW 1268445 8709830 HMPREF0424_1102 Gardnerella vaginalis 409-05 cell division protein FtsW YP_003374303.1 1266784 R 553190 CDS YP_003374304.1 283783550 8709480 complement(1268429..1270030) 1 NC_013721.1 identified by match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01087; UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase 1270030 murD 8709480 murD Gardnerella vaginalis 409-05 UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase YP_003374304.1 1268429 R 553190 CDS YP_003374305.1 283783551 8709061 complement(1270055..1271158) 1 NC_013721.1 identified by match to protein family HMM PF00953; match to protein family HMM TIGR00445; phospho-N-acetylmuramoyl-pentapeptide- transferase 1271158 mraY 8709061 mraY Gardnerella vaginalis 409-05 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_003374305.1 1270055 R 553190 CDS YP_003374306.1 283783552 8709961 complement(1271237..1272847) 1 NC_013721.1 identified by match to protein family HMM PF01225; match to protein family HMM PF02875; match to protein family HMM PF08245; match to protein family HMM TIGR01143; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 1272847 murF 8709961 murF Gardnerella vaginalis 409-05 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_003374306.1 1271237 R 553190 CDS YP_003374307.1 283783553 8709258 complement(1272918..1273949) 1 NC_013721.1 hypothetical protein 1273949 8709258 HMPREF0424_1106 Gardnerella vaginalis 409-05 hypothetical protein YP_003374307.1 1272918 R 553190 CDS YP_003374308.1 283783554 8708868 complement(1273992..1275833) 1 NC_013721.1 identified by match to protein family HMM PF00905; match to protein family HMM PF03717; penicillin-binding protein 1275833 8708868 HMPREF0424_1107 Gardnerella vaginalis 409-05 penicillin-binding protein YP_003374308.1 1273992 R 553190 CDS YP_003374309.1 283783555 8709356 complement(1275833..1276474) 1 NC_013721.1 hypothetical protein 1276474 8709356 HMPREF0424_1108 Gardnerella vaginalis 409-05 hypothetical protein YP_003374309.1 1275833 R 553190 CDS YP_003374310.1 283783556 8709912 complement(1276476..1277513) 1 NC_013721.1 identified by match to protein family HMM PF01795; match to protein family HMM TIGR00006; S-adenosyl-methyltransferase MraW 1277513 mraW 8709912 mraW Gardnerella vaginalis 409-05 S-adenosyl-methyltransferase MraW YP_003374310.1 1276476 R 553190 CDS YP_003374311.1 283783557 8709872 complement(1277513..1278325) 1 NC_013721.1 identified by match to protein family HMM PF02381; match to protein family HMM TIGR00242; protein MraZ 1278325 mraZ 8709872 mraZ Gardnerella vaginalis 409-05 protein MraZ YP_003374311.1 1277513 R 553190 CDS YP_003374312.1 283783558 8709205 1278614..1278778 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1278778 8709205 HMPREF0424_1111 Gardnerella vaginalis 409-05 hypothetical protein YP_003374312.1 1278614 D 553190 CDS YP_003374313.1 283783559 8709703 complement(1279057..1280394) 1 NC_013721.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 1280394 glnA_1 8709703 glnA_1 Gardnerella vaginalis 409-05 glutamine synthetase, type I YP_003374313.1 1279057 R 553190 CDS YP_003374314.1 283783560 8709032 complement(1280593..1281315) 1 NC_013721.1 hypothetical protein 1281315 8709032 HMPREF0424_1113 Gardnerella vaginalis 409-05 hypothetical protein YP_003374314.1 1280593 R 553190 CDS YP_003374315.1 283783561 8709009 complement(1281397..1284963) 1 NC_013721.1 identified by match to protein family HMM PF01336; match to protein family HMM PF02811; match to protein family HMM PF07733; match to protein family HMM TIGR00594; DNA polymerase III subunit alpha 1284963 dnaE 8709009 dnaE Gardnerella vaginalis 409-05 DNA polymerase III subunit alpha YP_003374315.1 1281397 R 553190 CDS YP_003374316.1 283783562 8709547 complement(1285010..1285975) 1 NC_013721.1 identified by match to protein family HMM PF00849; match to protein family HMM TIGR00005; RluA family pseudouridine synthase 1285975 8709547 HMPREF0424_1115 Gardnerella vaginalis 409-05 RluA family pseudouridine synthase YP_003374316.1 1285010 R 553190 CDS YP_003374317.1 283783563 8708860 complement(1285941..1286450) 1 NC_013721.1 identified by match to protein family HMM PF01252; signal peptidase II 1286450 lspA 8708860 lspA Gardnerella vaginalis 409-05 signal peptidase II YP_003374317.1 1285941 R 553190 CDS YP_003374318.1 283783564 8709057 complement(1286532..1287860) 1 NC_013721.1 identified by match to protein family HMM TIGR03544; DivIVA domain-containing protein 1287860 8709057 HMPREF0424_1117 Gardnerella vaginalis 409-05 DivIVA domain-containing protein YP_003374318.1 1286532 R 553190 CDS YP_003374319.1 283783565 8709753 complement(1288013..1288291) 1 NC_013721.1 hypothetical protein 1288291 8709753 HMPREF0424_1118 Gardnerella vaginalis 409-05 hypothetical protein YP_003374319.1 1288013 R 553190 CDS YP_003374320.1 283783566 8709176 1288465..1289475 1 NC_013721.1 identified by match to protein family HMM PF00106; match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01179; UDP-glucose 4-epimerase 1289475 galE 8709176 galE Gardnerella vaginalis 409-05 UDP-glucose 4-epimerase YP_003374320.1 1288465 D 553190 CDS YP_003374321.1 283783567 8710049 complement(1289816..1291867) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1291867 8710049 HMPREF0424_1122 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374321.1 1289816 R 553190 CDS YP_003374322.1 283783568 8709896 complement(1291870..1293720) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1293720 8709896 HMPREF0424_1123 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374322.1 1291870 R 553190 CDS YP_003374323.1 283783569 8709358 complement(1294579..1295286) 1 NC_013721.1 identified by match to protein family HMM TIGR02491; anaerobic ribonucleoside-triphosphate reductase activating protein 1295286 nrdG 8709358 nrdG Gardnerella vaginalis 409-05 anaerobic ribonucleoside-triphosphate reductase activating protein YP_003374323.1 1294579 R 553190 CDS YP_003374324.1 283783570 8708790 complement(1295507..1297924) 1 NC_013721.1 identified by match to protein family HMM PF01228; match to protein family HMM PF03477; match to protein family HMM TIGR02487; anaerobic ribonucleoside-triphosphate reductase 1297924 nrdD 8708790 nrdD Gardnerella vaginalis 409-05 anaerobic ribonucleoside-triphosphate reductase YP_003374324.1 1295507 R 553190 CDS YP_003374325.1 283783571 8708831 1298194..1298616 1 NC_013721.1 hypothetical protein 1298616 8708831 HMPREF0424_1126 Gardnerella vaginalis 409-05 hypothetical protein YP_003374325.1 1298194 D 553190 CDS YP_003374326.1 283783572 8709979 complement(1298997..1300820) 1 NC_013721.1 identified by match to protein family HMM PF00270; match to protein family HMM PF00271; DEAD/DEAH box helicase 1300820 8709979 HMPREF0424_1127 Gardnerella vaginalis 409-05 DEAD/DEAH box helicase YP_003374326.1 1298997 R 553190 CDS YP_003374327.1 283783573 8709237 complement(1300883..1301026) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1301026 8709237 HMPREF0424_1128 Gardnerella vaginalis 409-05 hypothetical protein YP_003374327.1 1300883 R 553190 CDS YP_003374328.1 283783574 8709432 complement(1301115..1302791) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR03719; ABC transporter ATP-binding protein 1302791 8709432 HMPREF0424_1129 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374328.1 1301115 R 553190 CDS YP_003374329.1 283783575 8709786 complement(1302930..1303331) 1 NC_013721.1 hypothetical protein 1303331 8709786 HMPREF0424_1130 Gardnerella vaginalis 409-05 hypothetical protein YP_003374329.1 1302930 R 553190 CDS YP_003374330.1 283783576 8708927 complement(1303430..1304665) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1304665 8708927 HMPREF0424_1131 Gardnerella vaginalis 409-05 hypothetical protein YP_003374330.1 1303430 R 553190 CDS YP_003374331.1 283783577 8709955 complement(1304937..1307246) 1 NC_013721.1 identified by match to protein family HMM PF00004; match to protein family HMM PF01434; match to protein family HMM PF06480; match to protein family HMM PF07728; match to protein family HMM TIGR01241; ATP-dependent metallopeptidase HflB 1307246 hflB 8709955 hflB Gardnerella vaginalis 409-05 ATP-dependent metallopeptidase HflB YP_003374331.1 1304937 R 553190 CDS YP_003374332.1 283783578 8709224 complement(1307308..1307868) 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01203; hypoxanthine phosphoribosyltransferase 1307868 hpt 8709224 hpt Gardnerella vaginalis 409-05 hypoxanthine phosphoribosyltransferase YP_003374332.1 1307308 R 553190 CDS YP_003374333.1 283783579 8709526 complement(1307837..1308955) 1 NC_013721.1 identified by match to protein family HMM PF01171; match to protein family HMM TIGR02432; tRNA(Ile)-lysidine synthetase 1308955 tilS 8709526 tilS Gardnerella vaginalis 409-05 tRNA(Ile)-lysidine synthetase YP_003374333.1 1307837 R 553190 CDS YP_003374334.1 283783580 8708833 complement(1309002..1310792) 1 NC_013721.1 identified by match to protein family HMM PF02113; D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase 1310792 8708833 HMPREF0424_1135 Gardnerella vaginalis 409-05 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase YP_003374334.1 1309002 R 553190 CDS YP_003374335.1 283783581 8709608 complement(1310867..1312519) 1 NC_013721.1 hypothetical protein 1312519 8709608 HMPREF0424_1136 Gardnerella vaginalis 409-05 hypothetical protein YP_003374335.1 1310867 R 553190 CDS YP_003374336.1 283783582 8709084 complement(1312534..1313439) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1313439 8709084 HMPREF0424_1137 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374336.1 1312534 R 553190 CDS YP_003374337.1 283783583 8709035 complement(1314130..1315365) 1 NC_013721.1 identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein 1315365 8709035 HMPREF0424_1138 Gardnerella vaginalis 409-05 glycosyltransferase, group 2 family protein YP_003374337.1 1314130 R 553190 CDS YP_003374338.1 283783584 8708975 complement(1315353..1316933) 1 NC_013721.1 identified by match to protein family HMM PF01594; hypothetical protein 1316933 8708975 HMPREF0424_1139 Gardnerella vaginalis 409-05 hypothetical protein YP_003374338.1 1315353 R 553190 CDS YP_003374339.1 283783585 8709373 1317205..1318641 1 NC_013721.1 identified by match to protein family HMM PF00120; match to protein family HMM PF03951; match to protein family HMM TIGR00653; glutamine synthetase, type I 1318641 glnA_2 8709373 glnA_2 Gardnerella vaginalis 409-05 glutamine synthetase, type I YP_003374339.1 1317205 D 553190 CDS YP_003374340.1 283783586 8709951 complement(1318723..1319364) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1319364 8709951 HMPREF0424_1141 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374340.1 1318723 R 553190 CDS YP_003374341.1 283783587 8709233 complement(1319485..1320804) 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1320804 8709233 HMPREF0424_1142 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003374341.1 1319485 R 553190 CDS YP_003374342.1 283783588 8710008 complement(1320879..1322249) 1 NC_013721.1 identified by match to protein family HMM PF02687; efflux ABC transporter permease 1322249 8710008 HMPREF0424_1143 Gardnerella vaginalis 409-05 efflux ABC transporter permease YP_003374342.1 1320879 R 553190 CDS YP_003374343.1 283783589 8708751 complement(1322861..1323268) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1323268 8708751 HMPREF0424_1144 Gardnerella vaginalis 409-05 hypothetical protein YP_003374343.1 1322861 R 553190 CDS YP_003374344.1 283783590 8709772 complement(1323298..1323558) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1323558 8709772 HMPREF0424_1145 Gardnerella vaginalis 409-05 hypothetical protein YP_003374344.1 1323298 R 553190 CDS YP_003374345.1 283783591 8709326 complement(1323742..1324719) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1324719 8709326 HMPREF0424_1146 Gardnerella vaginalis 409-05 hypothetical protein YP_003374345.1 1323742 R 553190 CDS YP_003374346.1 283783592 8708976 complement(1324850..1325503) 1 NC_013721.1 identified by match to protein family HMM PF01327; peptide deformylase 1325503 def_2 8708976 def_2 Gardnerella vaginalis 409-05 peptide deformylase YP_003374346.1 1324850 R 553190 CDS YP_003374347.1 283783593 8709868 complement(1325681..1327093) 1 NC_013721.1 identified by match to protein family HMM PF00408; match to protein family HMM PF02878; match to protein family HMM PF02879; match to protein family HMM PF02880; match to protein family HMM TIGR01455; phosphoglucosamine mutase 1327093 glmM 8709868 glmM Gardnerella vaginalis 409-05 phosphoglucosamine mutase YP_003374347.1 1325681 R 553190 CDS YP_003374348.1 283783594 8709361 complement(1327435..1330050) 1 NC_013721.1 identified by match to protein family HMM PF01433; match to protein family HMM TIGR02412; membrane alanyl aminopeptidase 1330050 pepN 8709361 pepN Gardnerella vaginalis 409-05 membrane alanyl aminopeptidase YP_003374348.1 1327435 R 553190 CDS YP_003374349.1 283783595 8709809 complement(1330147..1332174) 1 NC_013721.1 identified by match to protein family HMM PF00753; match to protein family HMM PF07521; hypothetical protein 1332174 8709809 HMPREF0424_1150 Gardnerella vaginalis 409-05 hypothetical protein YP_003374349.1 1330147 R 553190 CDS YP_003374350.1 283783596 8709570 complement(1332329..1333723) 1 NC_013721.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 1333723 8709570 HMPREF0424_1151 Gardnerella vaginalis 409-05 transporter, major facilitator family protein YP_003374350.1 1332329 R 553190 CDS YP_003374351.1 283783597 8709644 complement(1333785..1334471) 1 NC_013721.1 identified by match to protein family HMM PF00583; GNAT family acetyltransferase 1334471 8709644 HMPREF0424_1152 Gardnerella vaginalis 409-05 GNAT family acetyltransferase YP_003374351.1 1333785 R 553190 CDS YP_003374352.1 283783598 8708956 complement(1334653..1338846) 1 NC_013721.1 identified by match to protein family HMM PF00580; UvrD/REP helicase 1338846 8708956 HMPREF0424_1153 Gardnerella vaginalis 409-05 UvrD/REP helicase YP_003374352.1 1334653 R 553190 CDS YP_003374353.1 283783599 8708778 complement(1338849..1343435) 1 NC_013721.1 hypothetical protein 1343435 8708778 HMPREF0424_1154 Gardnerella vaginalis 409-05 hypothetical protein YP_003374353.1 1338849 R 553190 CDS YP_003374354.1 283783600 8709699 complement(1343479..1344276) 1 NC_013721.1 hypothetical protein 1344276 8709699 HMPREF0424_1155 Gardnerella vaginalis 409-05 hypothetical protein YP_003374354.1 1343479 R 553190 CDS YP_003374355.1 283783601 8710025 complement(1344309..1344458) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1344458 8710025 HMPREF0424_1156 Gardnerella vaginalis 409-05 hypothetical protein YP_003374355.1 1344309 R 553190 CDS YP_003374356.1 283783602 8709453 1344672..1346249 1 NC_013721.1 identified by match to protein family HMM PF02110; match to protein family HMM PF02581; match to protein family HMM TIGR00693; thiamine-phosphate diphosphorylase 1346249 thiE 8709453 thiE Gardnerella vaginalis 409-05 thiamine-phosphate diphosphorylase YP_003374356.1 1344672 D 553190 CDS YP_003374357.1 283783603 8708840 complement(1346344..1347264) 1 NC_013721.1 identified by match to protein family HMM PF08543; match to protein family HMM TIGR00097; phosphomethylpyrimidine kinase 1347264 thiD 8708840 thiD Gardnerella vaginalis 409-05 phosphomethylpyrimidine kinase YP_003374357.1 1346344 R 553190 CDS YP_003374358.1 283783604 8709422 complement(1347752..1357366) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1357366 8709422 HMPREF0424_1160 Gardnerella vaginalis 409-05 hypothetical protein YP_003374358.1 1347752 R 553190 CDS YP_003374359.1 283783605 8708745 complement(1357478..1358611) 1 NC_013721.1 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 1358611 8708745 HMPREF0424_1161 Gardnerella vaginalis 409-05 sortase family protein YP_003374359.1 1357478 R 553190 CDS YP_003374360.1 283783606 8709309 1358544..1358684 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1358684 8709309 HMPREF0424_1162 Gardnerella vaginalis 409-05 hypothetical protein YP_003374360.1 1358544 D 553190 CDS YP_003374361.1 283783607 8709871 complement(1358727..1358849) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1358849 8709871 HMPREF0424_1163 Gardnerella vaginalis 409-05 hypothetical protein YP_003374361.1 1358727 R 553190 CDS YP_003374362.1 283783608 8709129 complement(1359291..1361084) 1 NC_013721.1 identified by match to protein family HMM PF05738; match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1361084 8709129 HMPREF0424_1164 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374362.1 1359291 R 553190 CDS YP_003374363.1 283783609 8708923 complement(1361793..1362077) 1 NC_013721.1 identified by match to protein family HMM PF01381; XRE family transcriptional regulator 1362077 8708923 HMPREF0424_1165 Gardnerella vaginalis 409-05 XRE family transcriptional regulator YP_003374363.1 1361793 R 553190 CDS YP_003374364.1 283783610 8709860 complement(1362070..1362189) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1362189 8709860 HMPREF0424_1166 Gardnerella vaginalis 409-05 hypothetical protein YP_003374364.1 1362070 R 553190 CDS YP_003374365.1 283783611 8709493 complement(1362858..1363934) 1 NC_013721.1 hypothetical protein 1363934 8709493 HMPREF0424_1167 Gardnerella vaginalis 409-05 hypothetical protein YP_003374365.1 1362858 R 553190 CDS YP_003374366.1 283783612 8709391 complement(1364510..1368529) 1 NC_013721.1 identified by match to protein family HMM PF00623; match to protein family HMM PF04983; match to protein family HMM PF04997; match to protein family HMM PF04998; match to protein family HMM PF05000; match to protein family HMM TIGR02386; DNA-directed RNA polymerase subunit beta' 1368529 rpoC 8709391 rpoC Gardnerella vaginalis 409-05 DNA-directed RNA polymerase subunit beta' YP_003374366.1 1364510 R 553190 CDS YP_003374367.1 283783613 8709036 complement(1368600..1372166) 1 NC_013721.1 identified by match to protein family HMM PF00562; match to protein family HMM PF04560; match to protein family HMM PF04561; match to protein family HMM PF04563; match to protein family HMM PF04565; match to protein family HMM TIGR02013; DNA-directed RNA polymerase subunit beta 1372166 rpoB 8709036 rpoB Gardnerella vaginalis 409-05 DNA-directed RNA polymerase subunit beta YP_003374367.1 1368600 R 553190 CDS YP_003374368.1 283783614 8709092 1373042..1373731 1 NC_013721.1 identified by match to protein family HMM PF00588; RNA methyltransferase, TrmH family, group 2 1373731 8709092 HMPREF0424_1170 Gardnerella vaginalis 409-05 RNA methyltransferase, TrmH family, group 2 YP_003374368.1 1373042 D 553190 CDS YP_003374369.1 283783615 8709259 1373765..1374760 1 NC_013721.1 identified by match to protein family HMM PF00633; match to protein family HMM PF00730; A/G-specific adenine glycosylase 1374760 8709259 HMPREF0424_1171 Gardnerella vaginalis 409-05 A/G-specific adenine glycosylase YP_003374369.1 1373765 D 553190 CDS YP_003374370.1 283783616 8709974 1374890..1375684 1 NC_013721.1 hypothetical protein 1375684 8709974 HMPREF0424_1172 Gardnerella vaginalis 409-05 hypothetical protein YP_003374370.1 1374890 D 553190 CDS YP_003374371.1 283783617 8708997 complement(1375944..1377308) 1 NC_013721.1 identified by match to protein family HMM PF05167; hypothetical protein 1377308 8708997 HMPREF0424_1173 Gardnerella vaginalis 409-05 hypothetical protein YP_003374371.1 1375944 R 553190 CDS YP_003374372.1 283783618 8709946 complement(1377347..1377685) 1 NC_013721.1 identified by match to protein family HMM PF01842; ACT domain-containing protein 1377685 8709946 HMPREF0424_1174 Gardnerella vaginalis 409-05 ACT domain-containing protein YP_003374372.1 1377347 R 553190 CDS YP_003374373.1 283783619 8709195 complement(1377789..1378802) 1 NC_013721.1 identified by match to protein family HMM PF00156; match to protein family HMM TIGR01251; ribose-phosphate diphosphokinase 1378802 prs_2 8709195 prs_2 Gardnerella vaginalis 409-05 ribose-phosphate diphosphokinase YP_003374373.1 1377789 R 553190 CDS YP_003374374.1 283783620 8709639 complement(1378920..1379996) 1 NC_013721.1 identified by match to protein family HMM PF00892; match to protein family HMM PF03151; hypothetical protein 1379996 8709639 HMPREF0424_1176 Gardnerella vaginalis 409-05 hypothetical protein YP_003374374.1 1378920 R 553190 CDS YP_003374375.1 283783621 8708807 1380245..1381336 1 NC_013721.1 identified by match to protein family HMM PF01073; match to protein family HMM PF01370; match to protein family HMM PF02719; match to protein family HMM PF04321; match to protein family HMM PF07993; match to protein family HMM TIGR01181; dTDP-glucose 4,6-dehydratase 1381336 rfbB 8708807 rfbB Gardnerella vaginalis 409-05 dTDP-glucose 4,6-dehydratase YP_003374375.1 1380245 D 553190 CDS YP_003374376.1 283783622 8710043 complement(1381798..1383039) 1 NC_013721.1 identified by match to protein family HMM PF03275; match to protein family HMM TIGR00031; UDP-galactopyranose mutase 1383039 glf 8710043 glf Gardnerella vaginalis 409-05 UDP-galactopyranose mutase YP_003374376.1 1381798 R 553190 CDS YP_003374377.1 283783623 8709720 complement(1383146..1384114) 1 NC_013721.1 identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein 1384114 8709720 HMPREF0424_1180 Gardnerella vaginalis 409-05 glycosyltransferase, group 2 family protein YP_003374377.1 1383146 R 553190 CDS YP_003374378.1 283783624 8709023 complement(1384114..1385853) 1 NC_013721.1 identified by match to protein family HMM PF00534; glycosyltransferase 1385853 8709023 HMPREF0424_1181 Gardnerella vaginalis 409-05 glycosyltransferase YP_003374378.1 1384114 R 553190 CDS YP_003374379.1 283783625 8708941 complement(1385911..1387167) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1387167 8708941 HMPREF0424_1182 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374379.1 1385911 R 553190 CDS YP_003374380.1 283783626 8708898 complement(1387167..1388012) 1 NC_013721.1 identified by match to protein family HMM PF01061; ABC transporter 1388012 8708898 HMPREF0424_1183 Gardnerella vaginalis 409-05 ABC transporter YP_003374380.1 1387167 R 553190 CDS YP_003374381.1 283783627 8709610 complement(1388036..1389286) 1 NC_013721.1 hypothetical protein 1389286 8709610 HMPREF0424_1184 Gardnerella vaginalis 409-05 hypothetical protein YP_003374381.1 1388036 R 553190 CDS YP_003374382.1 283783628 8709253 complement(1389369..1391678) 1 NC_013721.1 hypothetical protein 1391678 8709253 HMPREF0424_1185 Gardnerella vaginalis 409-05 hypothetical protein YP_003374382.1 1389369 R 553190 CDS YP_003374383.1 283783629 8709426 complement(1391757..1392911) 1 NC_013721.1 identified by match to protein family HMM PF04991; LICD Protein Family 1392911 8709426 HMPREF0424_1186 Gardnerella vaginalis 409-05 LICD Protein Family YP_003374383.1 1391757 R 553190 CDS YP_003374384.1 283783630 8709784 complement(1393012..1393950) 1 NC_013721.1 hypothetical protein 1393950 8709784 HMPREF0424_1187 Gardnerella vaginalis 409-05 hypothetical protein YP_003374384.1 1393012 R 553190 CDS YP_003374385.1 283783631 8709295 complement(1393954..1395813) 1 NC_013721.1 identified by match to protein family HMM PF01633; match to protein family HMM PF01636; phosphotransferase enzyme family protein 1395813 8709295 HMPREF0424_1188 Gardnerella vaginalis 409-05 phosphotransferase enzyme family protein YP_003374385.1 1393954 R 553190 CDS YP_003374386.1 283783632 8709033 1396220..1397152 1 NC_013721.1 identified by match to protein family HMM PF00535; glycosyltransferase, group 2 family protein 1397152 8709033 HMPREF0424_1189 Gardnerella vaginalis 409-05 glycosyltransferase, group 2 family protein YP_003374386.1 1396220 D 553190 CDS YP_003374387.1 283783633 8709102 1397246..1399342 1 NC_013721.1 hypothetical protein 1399342 8709102 HMPREF0424_1191 Gardnerella vaginalis 409-05 hypothetical protein YP_003374387.1 1397246 D 553190 CDS YP_003374388.1 283783634 8708782 complement(1399328..1401316) 1 NC_013721.1 identified by match to protein family HMM PF01183; glycosyl hydrolase family 25 1401316 8708782 HMPREF0424_1190 Gardnerella vaginalis 409-05 glycosyl hydrolase family 25 YP_003374388.1 1399328 R 553190 CDS YP_003374389.1 283783635 8710070 complement(1401679..1402161) 1 NC_013721.1 identified by match to protein family HMM PF01648; match to protein family HMM TIGR00556; phosphopantethiene--protein transferase domain-containing protein 1402161 8710070 HMPREF0424_1194 Gardnerella vaginalis 409-05 phosphopantethiene--protein transferase domain-containing protein YP_003374389.1 1401679 R 553190 CDS YP_003374390.1 283783636 8709521 complement(1402254..1402373) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1402373 8709521 HMPREF0424_1195 Gardnerella vaginalis 409-05 hypothetical protein YP_003374390.1 1402254 R 553190 CDS YP_003374391.1 283783637 8708884 1402734..1412255 1 NC_013721.1 identified by match to protein family HMM PF08428; match to protein family HMM TIGR01167; match to protein family HMM TIGR02331; LPXTG-motif cell wall anchor domain-containing protein 1412255 8708884 HMPREF0424_1196 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374391.1 1402734 D 553190 CDS YP_003374392.1 283783638 8709759 complement(1412776..1422354) 1 NC_013721.1 identified by match to protein family HMM PF00109; match to protein family HMM PF00698; match to protein family HMM PF01575; match to protein family HMM PF02801; match to protein family HMM PF08354; MaoC-like protein 1422354 maoC 8709759 maoC Gardnerella vaginalis 409-05 MaoC-like protein YP_003374392.1 1412776 R 553190 CDS YP_003374393.1 283783639 8709366 complement(1422482..1424128) 1 NC_013721.1 identified by match to protein family HMM PF01039; carboxyl transferase domain-containing protein 1424128 8709366 HMPREF0424_1198 Gardnerella vaginalis 409-05 carboxyl transferase domain-containing protein YP_003374393.1 1422482 R 553190 CDS YP_003374394.1 283783640 8709227 complement(1424125..1426038) 1 NC_013721.1 identified by match to protein family HMM PF00289; match to protein family HMM PF00364; match to protein family HMM PF02222; match to protein family HMM PF02785; match to protein family HMM PF02786; carbamoyl-phosphate synthase ATP-binding subunit L 1426038 8709227 HMPREF0424_1199 Gardnerella vaginalis 409-05 carbamoyl-phosphate synthase ATP-binding subunit L YP_003374394.1 1424125 R 553190 CDS YP_003374395.1 283783641 8709729 1426244..1426894 1 NC_013721.1 identified by match to protein family HMM PF02632; BioY family protein 1426894 8709729 HMPREF0424_1200 Gardnerella vaginalis 409-05 BioY family protein YP_003374395.1 1426244 D 553190 CDS YP_003374396.1 283783642 8709419 complement(1427221..1428123) 1 NC_013721.1 identified by match to protein family HMM PF03099; match to protein family HMM TIGR00121; biotin--acetyl-CoA-carboxylase ligase 1428123 8709419 HMPREF0424_1201 Gardnerella vaginalis 409-05 biotin--acetyl-CoA-carboxylase ligase YP_003374396.1 1427221 R 553190 CDS YP_003374397.1 283783643 8709840 1428226..1430256 1 NC_013721.1 hypothetical protein 1430256 8709840 HMPREF0424_1202 Gardnerella vaginalis 409-05 hypothetical protein YP_003374397.1 1428226 D 553190 CDS YP_003374398.1 283783644 8709294 1430272..1431633 1 NC_013721.1 hypothetical protein 1431633 8709294 HMPREF0424_1203 Gardnerella vaginalis 409-05 hypothetical protein YP_003374398.1 1430272 D 553190 CDS YP_003374399.1 283783645 8709243 complement(1431826..1432287) 1 NC_013721.1 hypothetical protein 1432287 8709243 HMPREF0424_1204 Gardnerella vaginalis 409-05 hypothetical protein YP_003374399.1 1431826 R 553190 CDS YP_003374400.1 283783646 8708820 1432875..1433480 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1433480 8708820 HMPREF0424_1206 Gardnerella vaginalis 409-05 hypothetical protein YP_003374400.1 1432875 D 553190 CDS YP_003374401.1 283783647 8709516 complement(1433511..1434452) 1 NC_013721.1 hypothetical protein 1434452 8709516 HMPREF0424_1207 Gardnerella vaginalis 409-05 hypothetical protein YP_003374401.1 1433511 R 553190 CDS YP_003374402.1 283783648 8709695 complement(1434854..1435420) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1435420 8709695 HMPREF0424_1208 Gardnerella vaginalis 409-05 hypothetical protein YP_003374402.1 1434854 R 553190 CDS YP_003374403.1 283783649 8709767 complement(1436279..1436974) 1 NC_013721.1 identified by match to protein family HMM PF00687; match to protein family HMM TIGR01169; 50S ribosomal protein L1 1436974 rplA 8709767 rplA Gardnerella vaginalis 409-05 50S ribosomal protein L1 YP_003374403.1 1436279 R 553190 CDS YP_003864089.1 304653865 9715067 complement(1436989..1437420) 1 NC_013721.1 50S ribosomal protein L11 1437420 9715067 HMPREF0424_1209a Gardnerella vaginalis 409-05 50S ribosomal protein L11 YP_003864089.1 1436989 R 553190 CDS YP_003374404.1 283783650 8709312 complement(1437836..1437964) 1 NC_013721.1 hypothetical protein 1437964 8709312 HMPREF0424_1210 Gardnerella vaginalis 409-05 hypothetical protein YP_003374404.1 1437836 R 553190 CDS YP_003374405.1 283783651 8709986 complement(1438147..1438608) 1 NC_013721.1 similar to Plasmodium falciparum CPW-WPC domain protein; CPW-WPC domain-containing protein 1438608 8709986 HMPREF0424_1211 Gardnerella vaginalis 409-05 CPW-WPC domain-containing protein YP_003374405.1 1438147 R 553190 CDS YP_003374406.1 283783652 8708970 complement(1438703..1439722) 1 NC_013721.1 hypothetical protein 1439722 8708970 HMPREF0424_1212 Gardnerella vaginalis 409-05 hypothetical protein YP_003374406.1 1438703 R 553190 CDS YP_003374407.1 283783653 8709683 complement(1440069..1441436) 1 NC_013721.1 hypothetical protein 1441436 8709683 HMPREF0424_1213 Gardnerella vaginalis 409-05 hypothetical protein YP_003374407.1 1440069 R 553190 CDS YP_003374408.1 283783654 8708978 complement(1441623..1442642) 1 NC_013721.1 identified by match to protein family HMM PF04203; match to protein family HMM TIGR01076; sortase family protein 1442642 8708978 HMPREF0424_1214 Gardnerella vaginalis 409-05 sortase family protein YP_003374408.1 1441623 R 553190 CDS YP_003374409.1 283783655 8709671 complement(1442795..1444636) 1 NC_013721.1 identified by match to protein family HMM TIGR01167; LPXTG-motif cell wall anchor domain-containing protein 1444636 8709671 HMPREF0424_1215 Gardnerella vaginalis 409-05 LPXTG-motif cell wall anchor domain-containing protein YP_003374409.1 1442795 R 553190 CDS YP_003374410.1 283783656 8709766 complement(1444879..1447182) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1447182 8709766 HMPREF0424_1216 Gardnerella vaginalis 409-05 hypothetical protein YP_003374410.1 1444879 R 553190 CDS YP_003374411.1 283783657 8709250 complement(1447564..1448460) 1 NC_013721.1 identified by match to protein family HMM PF00467; match to protein family HMM PF02357; match to protein family HMM TIGR00922; transcription termination/antitermination factor NusG 1448460 nusG 8709250 nusG Gardnerella vaginalis 409-05 transcription termination/antitermination factor NusG YP_003374411.1 1447564 R 553190 CDS YP_003374412.1 283783658 8709402 complement(1448502..1448729) 1 NC_013721.1 identified by match to protein family HMM PF00584; match to protein family HMM TIGR00964; Preprotein translocase subunit SecE 1448729 secE 8709402 secE Gardnerella vaginalis 409-05 Preprotein translocase subunit SecE YP_003374412.1 1448502 R 553190 CDS YP_003374413.1 283783659 8710074 complement(1449000..1450238) 1 NC_013721.1 identified by match to protein family HMM PF00155; aspartate transaminase 1450238 8710074 HMPREF0424_1220 Gardnerella vaginalis 409-05 aspartate transaminase YP_003374413.1 1449000 R 553190 CDS YP_003374414.1 283783660 8709582 complement(1450341..1451486) 1 NC_013721.1 identified by match to protein family HMM PF00696; match to protein family HMM PF01472; match to protein family HMM TIGR01027; glutamate 5-kinase 1451486 proB 8709582 proB Gardnerella vaginalis 409-05 glutamate 5-kinase YP_003374414.1 1450341 R 553190 CDS YP_003374415.1 283783661 8708864 complement(1451512..1453194) 1 NC_013721.1 identified by match to protein family HMM PF01018; match to protein family HMM PF01926; match to protein family HMM PF09269; match to protein family HMM TIGR02729; match to protein family HMM TIGR03595; Obg family GTPase CgtA 1453194 cgtA 8708864 cgtA Gardnerella vaginalis 409-05 Obg family GTPase CgtA YP_003374415.1 1451512 R 553190 CDS YP_003374416.1 283783662 8709758 complement(1453330..1453581) 1 NC_013721.1 identified by match to protein family HMM PF01016; match to protein family HMM TIGR00062; 50S ribosomal protein L27 1453581 rpmA 8709758 rpmA Gardnerella vaginalis 409-05 50S ribosomal protein L27 YP_003374416.1 1453330 R 553190 CDS YP_003374417.1 283783663 8709213 complement(1454110..1457391) 1 NC_013721.1 identified by match to protein family HMM PF00575; match to protein family HMM TIGR00757; S1 RNA binding domain-containing protein 1457391 8709213 HMPREF0424_1224 Gardnerella vaginalis 409-05 S1 RNA binding domain-containing protein YP_003374417.1 1454110 R 553190 CDS YP_003374418.1 283783664 8709565 1457785..1458726 1 NC_013721.1 identified by match to protein family HMM PF03547; transporter, auxin efflux carrier (AEC) family protein 1458726 8709565 HMPREF0424_1225 Gardnerella vaginalis 409-05 transporter, auxin efflux carrier (AEC) family protein YP_003374418.1 1457785 D 553190 CDS YP_003374419.1 283783665 8709180 complement(1458774..1459061) 1 NC_013721.1 toxin-antitoxin system, antitoxin component 1459061 8709180 HMPREF0424_1226 Gardnerella vaginalis 409-05 toxin-antitoxin system, antitoxin component YP_003374419.1 1458774 R 553190 CDS YP_003374420.1 283783666 8708770 complement(1459074..1459241) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1459241 8708770 HMPREF0424_1227 Gardnerella vaginalis 409-05 hypothetical protein YP_003374420.1 1459074 R 553190 CDS YP_003374421.1 283783667 8709345 complement(1459698..1460558) 1 NC_013721.1 hypothetical protein 1460558 8709345 HMPREF0424_1228 Gardnerella vaginalis 409-05 hypothetical protein YP_003374421.1 1459698 R 553190 CDS YP_003374422.1 283783668 8708988 complement(1460968..1462395) 1 NC_013721.1 identified by match to protein family HMM PF00293; match to protein family HMM PF02545; match to protein family HMM TIGR00172; septum formation protein Maf 1462395 maf 8708988 maf Gardnerella vaginalis 409-05 septum formation protein Maf YP_003374422.1 1460968 R 553190 CDS YP_003374423.1 283783669 8709499 complement(1462429..1463496) 1 NC_013721.1 identified by match to protein family HMM PF00288; match to protein family HMM TIGR00191; homoserine kinase 1463496 thrB 8709499 thrB Gardnerella vaginalis 409-05 homoserine kinase YP_003374423.1 1462429 R 553190 CDS YP_003374424.1 283783670 8708802 complement(1463516..1464886) 1 NC_013721.1 identified by match to protein family HMM PF00742; match to protein family HMM PF03447; homoserine dehydrogenase 1464886 8708802 HMPREF0424_1231 Gardnerella vaginalis 409-05 homoserine dehydrogenase YP_003374424.1 1463516 R 553190 CDS YP_003374425.1 283783671 8709581 complement(1464952..1465953) 1 NC_013721.1 identified by match to protein family HMM PF02517; CAAX amino terminal protease family protein 1465953 8709581 HMPREF0424_1232 Gardnerella vaginalis 409-05 CAAX amino terminal protease family protein YP_003374425.1 1464952 R 553190 CDS YP_003374426.1 283783672 8709920 complement(1466029..1467171) 1 NC_013721.1 identified by match to protein family HMM PF01820; match to protein family HMM PF02222; match to protein family HMM PF07478; match to protein family HMM TIGR01205; D-alanine--D-alanine ligase 1467171 8709920 HMPREF0424_1233 Gardnerella vaginalis 409-05 D-alanine--D-alanine ligase YP_003374426.1 1466029 R 553190 CDS YP_003374427.1 283783673 8709359 complement(1467243..1468238) 1 NC_013721.1 identified by match to protein family HMM PF01210; match to protein family HMM PF02558; match to protein family HMM PF02737; match to protein family HMM PF07479; 3-hydroxyacyl-CoA dehydrogenase 1468238 8709359 HMPREF0424_1234 Gardnerella vaginalis 409-05 3-hydroxyacyl-CoA dehydrogenase YP_003374427.1 1467243 R 553190 CDS YP_003374428.1 283783674 8709916 complement(1468380..1469264) 1 NC_013721.1 identified by match to protein family HMM PF01553; acyltransferase 1469264 8709916 HMPREF0424_1235 Gardnerella vaginalis 409-05 acyltransferase YP_003374428.1 1468380 R 553190 CDS YP_003374429.1 283783675 8709364 complement(1469284..1470147) 1 NC_013721.1 identified by match to protein family HMM PF00950; match to protein family HMM TIGR03770; anchored repeat-type ABC transporter, permease subunit 1470147 8709364 HMPREF0424_1236 Gardnerella vaginalis 409-05 anchored repeat-type ABC transporter, permease subunit YP_003374429.1 1469284 R 553190 CDS YP_003374430.1 283783676 8709757 complement(1470147..1470935) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM TIGR03771; anchored repeat-type ABC transporter, ATP-binding subunit 1470935 8709757 HMPREF0424_1237 Gardnerella vaginalis 409-05 anchored repeat-type ABC transporter, ATP-binding subunit YP_003374430.1 1470147 R 553190 CDS YP_003374431.1 283783677 8709697 complement(1470956..1472671) 1 NC_013721.1 identified by match to protein family HMM PF01297; match to protein family HMM TIGR03769; match to protein family HMM TIGR03772; anchored repeat ABC transporter, substrate-binding protein 1472671 8709697 HMPREF0424_1238 Gardnerella vaginalis 409-05 anchored repeat ABC transporter, substrate-binding protein YP_003374431.1 1470956 R 553190 CDS YP_003374432.1 283783678 8708995 complement(1472723..1474897) 1 NC_013721.1 identified by match to protein family HMM TIGR03769; ABC transporter-associated repeat protein 1474897 8708995 HMPREF0424_1239 Gardnerella vaginalis 409-05 ABC transporter-associated repeat protein YP_003374432.1 1472723 R 553190 CDS YP_003374433.1 283783679 8709532 complement(1474878..1476077) 1 NC_013721.1 identified by match to protein family HMM TIGR03769; surface-anchored protein domain-containing protein 1476077 8709532 HMPREF0424_1240 Gardnerella vaginalis 409-05 surface-anchored protein domain-containing protein YP_003374433.1 1474878 R 553190 CDS YP_003374434.1 283783680 8708781 complement(1476112..1478427) 1 NC_013721.1 identified by match to protein family HMM TIGR03769; surface-anchored protein domain-containing protein 1478427 8708781 HMPREF0424_1241 Gardnerella vaginalis 409-05 surface-anchored protein domain-containing protein YP_003374434.1 1476112 R 553190 CDS YP_003374435.1 283783681 8709970 complement(1478656..1479210) 1 NC_013721.1 identified by match to protein family HMM PF00857; isochorismatase family protein 1479210 8709970 HMPREF0424_1242 Gardnerella vaginalis 409-05 isochorismatase family protein YP_003374435.1 1478656 R 553190 CDS YP_003374436.1 283783682 8710028 complement(1485518..1486333) 1 NC_013721.1 hypothetical protein 1486333 8710028 HMPREF0424_1246 Gardnerella vaginalis 409-05 hypothetical protein YP_003374436.1 1485518 R 553190 CDS YP_003374437.1 283783683 8709028 complement(1486357..1488990) 1 NC_013721.1 identified by match to protein family HMM PF02705; K+ potassium transporter 1488990 8709028 HMPREF0424_1247 Gardnerella vaginalis 409-05 K+ potassium transporter YP_003374437.1 1486357 R 553190 CDS YP_003374438.1 283783684 8708795 complement(1489155..1490135) 1 NC_013721.1 identified by match to protein family HMM PF01026; TatD family hydrolase 1490135 8708795 HMPREF0424_1248 Gardnerella vaginalis 409-05 TatD family hydrolase YP_003374438.1 1489155 R 553190 CDS YP_003374439.1 283783685 8709670 complement(1490190..1491986) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1491986 8709670 HMPREF0424_1249 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374439.1 1490190 R 553190 CDS YP_003374440.1 283783686 8708977 complement(1491989..1493803) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF00664; ABC transporter ATP-binding protein 1493803 8708977 HMPREF0424_1250 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374440.1 1491989 R 553190 CDS YP_003374441.1 283783687 8709818 complement(1493983..1495725) 1 NC_013721.1 identified by match to protein family HMM PF00496; extracellular solute-binding protein 1495725 8709818 HMPREF0424_1251 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374441.1 1493983 R 553190 CDS YP_003374442.1 283783688 8709040 complement(1496049..1497938) 1 NC_013721.1 identified by match to protein family HMM PF00005; match to protein family HMM PF08352; phosphonate C-P lyase system protein PhnK 1497938 8709040 HMPREF0424_1252 Gardnerella vaginalis 409-05 phosphonate C-P lyase system protein PhnK YP_003374442.1 1496049 R 553190 CDS YP_003374443.1 283783689 8709808 complement(1497960..1498907) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1498907 8709808 HMPREF0424_1253 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374443.1 1497960 R 553190 CDS YP_003374444.1 283783690 8709096 complement(1498932..1499915) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1499915 8709096 HMPREF0424_1254 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374444.1 1498932 R 553190 CDS YP_003374445.1 283783691 8709950 1500477..1501919 1 NC_013721.1 identified by match to protein family HMM PF03051; peptidase C1-like protein 1501919 8709950 HMPREF0424_1255 Gardnerella vaginalis 409-05 peptidase C1-like protein YP_003374445.1 1500477 D 553190 CDS YP_003374446.1 283783692 8709544 complement(1502264..1504141) 1 NC_013721.1 identified by match to protein family HMM PF09334; match to protein family HMM TIGR00398; methionine--tRNA ligase 1504141 metG 8709544 metG Gardnerella vaginalis 409-05 methionine--tRNA ligase YP_003374446.1 1502264 R 553190 CDS YP_003374447.1 283783693 8709335 1504426..1505052 1 NC_013721.1 hypothetical protein 1505052 8709335 HMPREF0424_1257 Gardnerella vaginalis 409-05 hypothetical protein YP_003374447.1 1504426 D 553190 CDS YP_003374448.1 283783694 8709664 1505043..1505306 1 NC_013721.1 hypothetical protein 1505306 8709664 HMPREF0424_1258 Gardnerella vaginalis 409-05 hypothetical protein YP_003374448.1 1505043 D 553190 CDS YP_003374449.1 283783695 8708986 complement(1505338..1506240) 1 NC_013721.1 identified by match to protein family HMM PF00590; match to protein family HMM TIGR00096; S-adenosylmethionine-dependent methyltransferase, YraL family 1506240 yraL 8708986 yraL Gardnerella vaginalis 409-05 S-adenosylmethionine-dependent methyltransferase, YraL family YP_003374449.1 1505338 R 553190 CDS YP_003374450.1 283783696 8709755 1506370..1507212 1 NC_013721.1 lipase/esterase 1507212 8709755 HMPREF0424_1260 Gardnerella vaginalis 409-05 lipase/esterase YP_003374450.1 1506370 D 553190 CDS YP_003374451.1 283783697 8709681 complement(1507387..1508904) 1 NC_013721.1 identified by match to protein family HMM PF01268; formate--tetrahydrofolate ligase 1508904 fhs 8709681 fhs Gardnerella vaginalis 409-05 formate--tetrahydrofolate ligase YP_003374451.1 1507387 R 553190 CDS YP_003374452.1 283783698 8709889 complement(1509133..1510740) 1 NC_013721.1 identified by match to protein family HMM PF03577; peptidase family C69 1510740 8709889 HMPREF0424_1262 Gardnerella vaginalis 409-05 peptidase family C69 YP_003374452.1 1509133 R 553190 CDS YP_003374453.1 283783699 8709215 complement(1510852..1511403) 1 NC_013721.1 identified by match to protein family HMM TIGR00481; Raf-like protein 1511403 8709215 HMPREF0424_1263 Gardnerella vaginalis 409-05 Raf-like protein YP_003374453.1 1510852 R 553190 CDS YP_003374454.1 283783700 8709354 complement(1511626..1513158) 1 NC_013721.1 identified by match to protein family HMM PF04215; PTS system transporter subunit IIBC family protein 1513158 8709354 HMPREF0424_1264 Gardnerella vaginalis 409-05 PTS system transporter subunit IIBC family protein YP_003374454.1 1511626 R 553190 CDS YP_003374455.1 283783701 8709810 complement(1513178..1513291) 1 NC_013721.1 lipoprotein 1513291 8709810 HMPREF0424_1265 Gardnerella vaginalis 409-05 lipoprotein YP_003374455.1 1513178 R 553190 CDS YP_003374456.1 283783702 8708889 complement(1513275..1513544) 1 NC_013721.1 identified by match to protein family HMM PF02302; PTS system lactose/cellobiose specific transporter subunit IIB 1513544 8708889 HMPREF0424_1266 Gardnerella vaginalis 409-05 PTS system lactose/cellobiose specific transporter subunit IIB YP_003374456.1 1513275 R 553190 CDS YP_003374457.1 283783703 8709917 complement(1513608..1514057) 1 NC_013721.1 identified by match to protein family HMM PF00359; phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 1514057 8709917 HMPREF0424_1267 Gardnerella vaginalis 409-05 phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 YP_003374457.1 1513608 R 553190 CDS YP_003374458.1 283783704 8709398 complement(1514162..1515820) 1 NC_013721.1 identified by match to protein family HMM PF00391; match to protein family HMM PF02896; match to protein family HMM PF05524; match to protein family HMM TIGR01417; phosphoenolpyruvate-protein phosphotransferase 1515820 ptsP 8709398 ptsP Gardnerella vaginalis 409-05 phosphoenolpyruvate-protein phosphotransferase YP_003374458.1 1514162 R 553190 CDS YP_003374459.1 283783705 8708865 1516094..1516360 1 NC_013721.1 identified by match to protein family HMM PF00381; match to protein family HMM TIGR01003; HPr family phosphocarrier protein 1516360 8708865 HMPREF0424_1269 Gardnerella vaginalis 409-05 HPr family phosphocarrier protein YP_003374459.1 1516094 D 553190 CDS YP_003374460.1 283783706 8709548 1516460..1517539 1 NC_013721.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1517539 8709548 HMPREF0424_1270 Gardnerella vaginalis 409-05 LacI family transcriptional regulator YP_003374460.1 1516460 D 553190 CDS YP_003374461.1 283783707 8708929 complement(1517552..1518730) 1 NC_013721.1 DNA polymerase III, delta' subunit family protein 1518730 8708929 HMPREF0424_1271 Gardnerella vaginalis 409-05 DNA polymerase III, delta' subunit family protein YP_003374461.1 1517552 R 553190 CDS YP_003374462.1 283783708 8708979 complement(1518785..1519489) 1 NC_013721.1 identified by match to protein family HMM PF02223; match to protein family HMM TIGR00041; dTMP kinase 1519489 tmk 8708979 tmk Gardnerella vaginalis 409-05 dTMP kinase YP_003374462.1 1518785 R 553190 CDS YP_003374463.1 283783709 8709654 complement(1519537..1522383) 1 NC_013721.1 identified by match to protein family HMM PF01131; match to protein family HMM PF01751; match to protein family HMM TIGR01051; DNA topoisomerase 1522383 topA 8709654 topA Gardnerella vaginalis 409-05 DNA topoisomerase YP_003374463.1 1519537 R 553190 CDS YP_003374464.1 283783710 8709329 complement(1522515..1523822) 1 NC_013721.1 identified by match to protein family HMM PF01569; PAP2 family protein 1523822 8709329 HMPREF0424_1274 Gardnerella vaginalis 409-05 PAP2 family protein YP_003374464.1 1522515 R 553190 CDS YP_003374465.1 283783711 8710026 complement(1524006..1525148) 1 NC_013721.1 identified by match to protein family HMM PF01658; match to protein family HMM PF07994; inositol 1-phosphate synthase 1525148 8710026 HMPREF0424_1276 Gardnerella vaginalis 409-05 inositol 1-phosphate synthase YP_003374465.1 1524006 R 553190 CDS YP_003374466.1 283783712 8709201 1525321..1527645 1 NC_013721.1 identified by match to protein family HMM PF00905; match to protein family HMM PF00912; transglycosylase 1527645 8709201 HMPREF0424_1277 Gardnerella vaginalis 409-05 transglycosylase YP_003374466.1 1525321 D 553190 CDS YP_003374467.1 283783713 8709895 complement(1527740..1528483) 1 NC_013721.1 identified by match to protein family HMM PF00702; HAD hydrolase, family IA, variant 3 1528483 8709895 HMPREF0424_1278 Gardnerella vaginalis 409-05 HAD hydrolase, family IA, variant 3 YP_003374467.1 1527740 R 553190 CDS YP_003374468.1 283783714 8708939 complement(1528623..1529219) 1 NC_013721.1 identified by match to protein family HMM PF00376; MerR family transcriptional regulator 1529219 8708939 HMPREF0424_1279 Gardnerella vaginalis 409-05 MerR family transcriptional regulator YP_003374468.1 1528623 R 553190 CDS YP_003374469.1 283783715 8709663 complement(1529307..1530368) 1 NC_013721.1 identified by match to protein family HMM PF00226; match to protein family HMM PF01556; DnaJ domain-containing protein 1530368 dnaJ 8709663 dnaJ Gardnerella vaginalis 409-05 DnaJ domain-containing protein YP_003374469.1 1529307 R 553190 CDS YP_003374470.1 283783716 8708760 complement(1530493..1531191) 1 NC_013721.1 identified by match to protein family HMM PF01025; co-chaperone GrpE 1531191 grpE 8708760 grpE Gardnerella vaginalis 409-05 co-chaperone GrpE YP_003374470.1 1530493 R 553190 CDS YP_003374471.1 283783717 8709477 complement(1531191..1533074) 1 NC_013721.1 identified by match to protein family HMM PF00012; match to protein family HMM TIGR02350; chaperone protein DnaK 1533074 dnaK 8709477 dnaK Gardnerella vaginalis 409-05 chaperone protein DnaK YP_003374471.1 1531191 R 553190 CDS YP_003374472.1 283783718 8709981 complement(1533352..1534083) 1 NC_013721.1 identified by match to protein family HMM PF00899; match to protein family HMM PF05237; thiamine biosynthesis protein ThiF family protein 1534083 8709981 HMPREF0424_1283 Gardnerella vaginalis 409-05 thiamine biosynthesis protein ThiF family protein YP_003374472.1 1533352 R 553190 CDS YP_003374473.1 283783719 8709412 complement(1534119..1534931) 1 NC_013721.1 identified by match to protein family HMM PF05690; thiazole biosynthesis protein ThiG 1534931 thiG_2 8709412 thiG_2 Gardnerella vaginalis 409-05 thiazole biosynthesis protein ThiG YP_003374473.1 1534119 R 553190 CDS YP_003374474.1 283783720 8709839 complement(1534983..1535189) 1 NC_013721.1 identified by match to protein family HMM PF02597; match to protein family HMM TIGR01683; thiamine biosynthesis protein ThiS 1535189 thiS_2 8709839 thiS_2 Gardnerella vaginalis 409-05 thiamine biosynthesis protein ThiS YP_003374474.1 1534983 R 553190 CDS YP_003374475.1 283783721 8709585 complement(1535313..1536383) 1 NC_013721.1 identified by match to protein family HMM PF01266; match to protein family HMM TIGR02352; glycine oxidase ThiO 1536383 thiO 8709585 thiO Gardnerella vaginalis 409-05 glycine oxidase ThiO YP_003374475.1 1535313 R 553190 CDS YP_003374476.1 283783722 8708772 complement(1536873..1539620) 1 NC_013721.1 identified by match to protein family HMM PF01055; glycosyl hydrolase family protein 1539620 8708772 HMPREF0424_1288 Gardnerella vaginalis 409-05 glycosyl hydrolase family protein YP_003374476.1 1536873 R 553190 CDS YP_003374477.1 283783723 8709476 complement(1539731..1540642) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1540642 8709476 HMPREF0424_1289 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374477.1 1539731 R 553190 CDS YP_003374478.1 283783724 8709240 complement(1540639..1541574) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1541574 8709240 HMPREF0424_1290 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374478.1 1540639 R 553190 CDS YP_003374479.1 283783725 8709886 complement(1541622..1543007) 1 NC_013721.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1543007 8709886 HMPREF0424_1291 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374479.1 1541622 R 553190 CDS YP_003374480.1 283783726 8709340 1543292..1544317 1 NC_013721.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1544317 8709340 HMPREF0424_1292 Gardnerella vaginalis 409-05 LacI family transcriptional regulator YP_003374480.1 1543292 D 553190 CDS YP_003374481.1 283783727 8709825 complement(1544462..1545298) 1 NC_013721.1 hypothetical protein 1545298 8709825 HMPREF0424_1293 Gardnerella vaginalis 409-05 hypothetical protein YP_003374481.1 1544462 R 553190 CDS YP_003374482.1 283783728 8708962 complement(1545376..1547076) 1 NC_013721.1 identified by match to protein family HMM PF00128; alpha amylase 1547076 8708962 HMPREF0424_1294 Gardnerella vaginalis 409-05 alpha amylase YP_003374482.1 1545376 R 553190 CDS YP_003374483.1 283783729 8709678 1547335..1548564 1 NC_013721.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1548564 8709678 HMPREF0424_1295 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374483.1 1547335 D 553190 CDS YP_003374484.1 283783730 8708784 1548724..1550130 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1550130 8708784 HMPREF0424_1296 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374484.1 1548724 D 553190 CDS YP_003374485.1 283783731 8709975 1550127..1551050 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1551050 8709975 HMPREF0424_1297 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374485.1 1550127 D 553190 CDS YP_003374486.1 283783732 8709264 1551362..1553371 1 NC_013721.1 identified by match to protein family HMM PF00128; match to protein family HMM PF02922; match to protein family HMM TIGR02104; pullulanase 1553371 pulA_2 8709264 pulA_2 Gardnerella vaginalis 409-05 pullulanase YP_003374486.1 1551362 D 553190 CDS YP_003374487.1 283783733 8709746 1553648..1555897 1 NC_013721.1 identified by match to protein family HMM PF02446; match to protein family HMM TIGR00217; 4-alpha-glucanotransferase 1555897 malQ_2 8709746 malQ_2 Gardnerella vaginalis 409-05 4-alpha-glucanotransferase YP_003374487.1 1553648 D 553190 CDS YP_003374488.1 283783734 8709658 complement(1556046..1556177) 1 NC_013721.1 hypothetical protein 1556177 8709658 HMPREF0424_1300 Gardnerella vaginalis 409-05 hypothetical protein YP_003374488.1 1556046 R 553190 CDS YP_003374489.1 283783735 8708987 complement(1556366..1556974) 1 NC_013721.1 hypothetical protein 1556974 8708987 HMPREF0424_1301 Gardnerella vaginalis 409-05 hypothetical protein YP_003374489.1 1556366 R 553190 CDS YP_003374490.1 283783736 8709552 complement(1557162..1557995) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1557995 8709552 HMPREF0424_1302 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374490.1 1557162 R 553190 CDS YP_003374491.1 283783737 8708863 complement(1557992..1558843) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1558843 8708863 HMPREF0424_1303 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374491.1 1557992 R 553190 CDS YP_003374492.1 283783738 8709405 1559146..1560159 1 NC_013721.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein 1560159 8709405 HMPREF0424_1304 Gardnerella vaginalis 409-05 periplasmic binding protein and sugar binding domain of the LacI family protein YP_003374492.1 1559146 D 553190 CDS YP_003374493.1 283783739 8709298 complement(1560306..1561649) 1 NC_013721.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1561649 8709298 HMPREF0424_1305 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374493.1 1560306 R 553190 CDS YP_003374494.1 283783740 8709046 complement(1561922..1563337) 1 NC_013721.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1563337 8709046 HMPREF0424_1306 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374494.1 1561922 R 553190 CDS YP_003374495.1 283783741 8708920 complement(1563524..1564234) 1 NC_013721.1 identified by match to protein family HMM PF00300; phosphoglycerate mutase family protein 1564234 8708920 HMPREF0424_1307 Gardnerella vaginalis 409-05 phosphoglycerate mutase family protein YP_003374495.1 1563524 R 553190 CDS YP_003374496.1 283783742 8709669 1564404..1564859 1 NC_013721.1 hypothetical protein 1564859 8709669 HMPREF0424_1308 Gardnerella vaginalis 409-05 hypothetical protein YP_003374496.1 1564404 D 553190 CDS YP_003374497.1 283783743 8709923 1564810..1565709 1 NC_013721.1 identified by match to protein family HMM PF00881; nitroreductase family protein 1565709 8709923 HMPREF0424_1309 Gardnerella vaginalis 409-05 nitroreductase family protein YP_003374497.1 1564810 D 553190 CDS YP_003374498.1 283783744 8709525 complement(1565745..1565930) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1565930 8709525 HMPREF0424_1310 Gardnerella vaginalis 409-05 hypothetical protein YP_003374498.1 1565745 R 553190 CDS YP_003374499.1 283783745 8709798 1566274..1567800 1 NC_013721.1 identified by match to protein family HMM PF00155; match to protein family HMM PF01212; match to protein family HMM PF01381; aminotransferase AlaT 1567800 8709798 HMPREF0424_1311 Gardnerella vaginalis 409-05 aminotransferase AlaT YP_003374499.1 1566274 D 553190 CDS YP_003374500.1 283783746 8709116 complement(1567917..1568978) 1 NC_013721.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein 1568978 8709116 HMPREF0424_1312 Gardnerella vaginalis 409-05 periplasmic binding protein and sugar binding domain of the LacI family protein YP_003374500.1 1567917 R 553190 CDS YP_003374501.1 283783747 8709777 complement(1569008..1570387) 1 NC_013721.1 identified by match to protein family HMM PF00128; alpha amylase 1570387 8709777 HMPREF0424_1313 Gardnerella vaginalis 409-05 alpha amylase YP_003374501.1 1569008 R 553190 CDS YP_003374502.1 283783748 8709160 complement(1570420..1571241) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1571241 8709160 HMPREF0424_1314 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374502.1 1570420 R 553190 CDS YP_003374503.1 283783749 8708990 complement(1571241..1572146) 1 NC_013721.1 identified by match to protein family HMM PF00528; ABC transporter permease 1572146 8708990 HMPREF0424_1315 Gardnerella vaginalis 409-05 ABC transporter permease YP_003374503.1 1571241 R 553190 CDS YP_003374504.1 283783750 8709118 complement(1572231..1573502) 1 NC_013721.1 identified by match to protein family HMM PF01547; extracellular solute-binding protein 1573502 8709118 HMPREF0424_1316 Gardnerella vaginalis 409-05 extracellular solute-binding protein YP_003374504.1 1572231 R 553190 CDS YP_003374505.1 283783751 8709041 complement(1573710..1575572) 1 NC_013721.1 identified by match to protein family HMM PF00128; alpha amylase 1575572 8709041 HMPREF0424_1317 Gardnerella vaginalis 409-05 alpha amylase YP_003374505.1 1573710 R 553190 CDS YP_003374506.1 283783752 8709256 1575876..1577138 1 NC_013721.1 identified by match to protein family HMM PF07690; transporter, major facilitator family protein 1577138 8709256 HMPREF0424_1318 Gardnerella vaginalis 409-05 transporter, major facilitator family protein YP_003374506.1 1575876 D 553190 CDS YP_003374507.1 283783753 8709836 complement(1577183..1577707) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1577707 8709836 HMPREF0424_1319 Gardnerella vaginalis 409-05 hypothetical protein YP_003374507.1 1577183 R 553190 CDS YP_003374508.1 283783754 8709305 complement(1579637..1580539) 1 NC_013721.1 lipoprotein 1580539 8709305 HMPREF0424_1322 Gardnerella vaginalis 409-05 lipoprotein YP_003374508.1 1579637 R 553190 CDS YP_003374509.1 283783755 8710013 complement(1580557..1580949) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1580949 8710013 HMPREF0424_1323 Gardnerella vaginalis 409-05 hypothetical protein YP_003374509.1 1580557 R 553190 CDS YP_003374510.1 283783756 8709983 complement(1581370..1582545) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1582545 8709983 HMPREF0424_1324 Gardnerella vaginalis 409-05 hypothetical protein YP_003374510.1 1581370 R 553190 CDS YP_003374511.1 283783757 8709531 complement(1582560..1583210) 1 NC_013721.1 identified by match to protein family HMM PF00072; match to protein family HMM PF00196; LuxR family transcriptional regulator 1583210 8709531 HMPREF0424_1325 Gardnerella vaginalis 409-05 LuxR family transcriptional regulator YP_003374511.1 1582560 R 553190 CDS YP_003374512.1 283783758 8709168 complement(1583405..1584742) 1 NC_013721.1 hypothetical protein 1584742 8709168 HMPREF0424_1326 Gardnerella vaginalis 409-05 hypothetical protein YP_003374512.1 1583405 R 553190 CDS YP_003374513.1 283783759 8709059 complement(1584891..1585703) 1 NC_013721.1 identified by match to protein family HMM PF00881; nitroreductase family protein 1585703 8709059 HMPREF0424_1327 Gardnerella vaginalis 409-05 nitroreductase family protein YP_003374513.1 1584891 R 553190 CDS YP_003374514.1 283783760 8710027 1591863..1592636 1 NC_013721.1 identified by match to protein family HMM PF02146; Sir2 family transcriptional regulator 1592636 8710027 HMPREF0424_1331 Gardnerella vaginalis 409-05 Sir2 family transcriptional regulator YP_003374514.1 1591863 D 553190 CDS YP_003374515.1 283783761 8709333 complement(1592662..1594581) 1 NC_013721.1 identified by match to protein family HMM PF00128; alpha amylase 1594581 8709333 HMPREF0424_1332 Gardnerella vaginalis 409-05 alpha amylase YP_003374515.1 1592662 R 553190 CDS YP_003374516.1 283783762 8709404 complement(1594795..1595763) 1 NC_013721.1 identified by match to protein family HMM PF02558; match to protein family HMM PF08546; match to protein family HMM TIGR00745; 2-dehydropantoate 2-reductase 1595763 8709404 HMPREF0424_1333 Gardnerella vaginalis 409-05 2-dehydropantoate 2-reductase YP_003374516.1 1594795 R 553190 CDS YP_003374517.1 283783763 8709858 complement(1596006..1597067) 1 NC_013721.1 identified by match to protein family HMM PF00294; ribokinase 1597067 8709858 HMPREF0424_1334 Gardnerella vaginalis 409-05 ribokinase YP_003374517.1 1596006 R 553190 CDS YP_003374518.1 283783764 8709279 complement(1597099..1597494) 1 NC_013721.1 identified by match to protein family HMM PF05025; RbsD/FucU transport family protein 1597494 8709279 HMPREF0424_1335 Gardnerella vaginalis 409-05 RbsD/FucU transport family protein YP_003374518.1 1597099 R 553190 CDS YP_003374519.1 283783765 8709024 complement(1597789..1598727) 1 NC_013721.1 identified by match to protein family HMM PF00532; periplasmic binding protein and sugar binding domain of the LacI family protein 1598727 8709024 HMPREF0424_1336 Gardnerella vaginalis 409-05 periplasmic binding protein and sugar binding domain of the LacI family protein YP_003374519.1 1597789 R 553190 CDS YP_003374520.1 283783766 8709418 complement(1598991..1599992) 1 NC_013721.1 identified by match to protein family HMM PF02653; amino acid ABC transporter permease 1599992 8709418 HMPREF0424_1337 Gardnerella vaginalis 409-05 amino acid ABC transporter permease YP_003374520.1 1598991 R 553190 CDS YP_003374521.1 283783767 8709440 complement(1600164..1601657) 1 NC_013721.1 identified by match to protein family HMM PF00005; ABC transporter ATP-binding protein 1601657 8709440 HMPREF0424_1338 Gardnerella vaginalis 409-05 ABC transporter ATP-binding protein YP_003374521.1 1600164 R 553190 CDS YP_003374522.1 283783768 8708907 complement(1601874..1602884) 1 NC_013721.1 identified by match to protein family HMM PF00356; match to protein family HMM PF00532; LacI family transcriptional regulator 1602884 8708907 HMPREF0424_1339 Gardnerella vaginalis 409-05 LacI family transcriptional regulator YP_003374522.1 1601874 R 553190 CDS YP_003374523.1 283783769 8709267 complement(1603275..1603736) 1 NC_013721.1 identified by match to protein family HMM PF00383; cytidine and deoxycytidylate deaminase zinc-binding region 1603736 8709267 HMPREF0424_1340 Gardnerella vaginalis 409-05 cytidine and deoxycytidylate deaminase zinc-binding region YP_003374523.1 1603275 R 553190 CDS YP_003374524.1 283783770 8709811 complement(1603811..1604650) 1 NC_013721.1 identified by match to protein family HMM PF02230; phospholipase/carboxylesterase 1604650 8709811 HMPREF0424_1341 Gardnerella vaginalis 409-05 phospholipase/carboxylesterase YP_003374524.1 1603811 R 553190 CDS YP_003374525.1 283783771 8710041 complement(1604897..1606222) 1 NC_013721.1 identified by match to protein family HMM PF01702; match to protein family HMM TIGR00430; match to protein family HMM TIGR00449; tRNA-guanine transglycosylase 1606222 tgt 8710041 tgt Gardnerella vaginalis 409-05 tRNA-guanine transglycosylase YP_003374525.1 1604897 R 553190 CDS YP_003374526.1 283783772 8709082 1606408..1608192 1 NC_013721.1 identified by match to protein family HMM PF00089; match to protein family HMM PF00595; trypsin 1608192 8709082 HMPREF0424_1344 Gardnerella vaginalis 409-05 trypsin YP_003374526.1 1606408 D 553190 CDS YP_003374527.1 283783773 8709558 complement(1608328..1610133) 1 NC_013721.1 hypothetical protein 1610133 8709558 HMPREF0424_1345 Gardnerella vaginalis 409-05 hypothetical protein YP_003374527.1 1608328 R 553190 CDS YP_003374528.1 283783774 8708846 complement(1610264..1611259) 1 NC_013721.1 identified by match to protein family HMM PF00588; match to protein family HMM PF08032; match to protein family HMM TIGR00186; TrmH family RNA methyltransferase 1611259 8708846 HMPREF0424_1346 Gardnerella vaginalis 409-05 TrmH family RNA methyltransferase YP_003374528.1 1610264 R 553190 CDS YP_003374529.1 283783775 8708871 1611486..1614476 1 NC_013721.1 identified by match to protein family HMM PF00122; match to protein family HMM PF00689; match to protein family HMM PF00690; match to protein family HMM PF00702; match to protein family HMM TIGR01494; calcium-translocating P-type ATPase, PMCA-type 1614476 8708871 HMPREF0424_1347 Gardnerella vaginalis 409-05 calcium-translocating P-type ATPase, PMCA-type YP_003374529.1 1611486 D 553190 CDS YP_003374530.1 283783776 8709401 1614765..1615346 1 NC_013721.1 identified by match to protein family HMM PF00692; match to protein family HMM TIGR02274; dCTP deaminase 1615346 dcd 8709401 dcd Gardnerella vaginalis 409-05 dCTP deaminase YP_003374530.1 1614765 D 553190 CDS YP_003374531.1 283783777 8708966 1615922..1617115 1 NC_013721.1 identified by match to protein family HMM PF00291; match to protein family HMM TIGR00263; tryptophan synthase subunit beta 1617115 trpB 8708966 trpB Gardnerella vaginalis 409-05 tryptophan synthase subunit beta YP_003374531.1 1615922 D 553190 CDS YP_003374532.1 283783778 8710005 complement(1617276..1617491) 1 NC_013721.1 identified by glimmer; putative; hypothetical protein 1617491 8710005 HMPREF0424_1350 Gardnerella vaginalis 409-05 hypothetical protein YP_003374532.1 1617276 R 553190 CDS