-- dump date   	20140619_094249
-- class       	Genbank::tRNA
-- table       	trna_note
-- id	note
Flexsi_R0001	COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: mvu:Metvu_0402 DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region
Flexsi_R0006	COGs: COG0050 GTPase - translation elongation factors; InterProIPR004160:IPR004541:IPR005225:IPR004161:IPR 000795; KEGG: ddf:DEFDS_1787 translation elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein
Flexsi_R0007	InterPro IPR005807:IPR001901; KEGG: cni:Calni_1534 preprotein translocase, SecE subunit; PFAM: Protein secE/sec61-gamma protein; SPTR: Preprotein translocase, SecE subunit; TIGRFAM: SecE subunit of protein translocation complex
Flexsi_R0012	COGs: COG0104 Adenylosuccinate synthase; HAMAP: Adenylosuccinate synthetase; InterPro IPR001114; KEGG: cni:Calni_0375 adenylosuccinate synthetase; PFAM: Adenylosuccinate synthetase; PRIAM: Adenylosuccinate synthase; SMART: Adenylosuccinate synthetase; SPTR: Adenylosuccinate synthetase; TIGRFAM: Adenylosuccinate synthetase
Flexsi_R0013	COGs: COG1871 Chemotaxis protein; stimulates methylation of MCP protein; KEGG: plt:Plut_1395 CheD, stimulates methylation of MCP proteins; SPTR: Probable chemoreceptor glutamine deamidase CheD
Flexsi_R0014	COGs: COG0790 FOG: TPR repeat SEL1 subfamily; InterPro IPR006597; KEGG: cni:Calni_2090 Sel1 domain protein repeat-containing protein; PFAM: Sel1-like; SMART: Sel1-like; SPTR: Sel1 domain protein repeat-containing protein
Flexsi_R0015	COGs: COG3323 conserved hypothetical protein; InterPro IPR002678; KEGG: ddf:DEFDS_1485 hypothetical protein; PFAM: NGG1p interacting factor 3, NIF3; SPTR: Putative uncharacterized protein; TIGRFAM: NGG1p interacting factor 3, NIF3
Flexsi_R0016	COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR002523:IPR004488; KEGG: cni:Calni_1555 magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA
Flexsi_R0017	KEGG: dap:Dacet_2165 hypothetical protein; SPTR: Putative uncharacterized protein
Flexsi_R0018	COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: dap:Dacet_0113 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aminotransferase class I and II
Flexsi_R0020	COGs: COG0136 Aspartate-semialdehyde dehydrogenase; InterPro IPR000534:IPR012280:IPR005986; KEGG: ddf:DEFDS_1418 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase, dimerisation region; Semialdehyde dehydrogenase, NAD-binding; PRIAM: Aspartate-semialdehyde dehydrogenase; SPTR: Aspartate-semialdehyde dehydrogenase; TIGRFAM: Aspartate-semialdehyde dehydrogenase, bacterial
Flexsi_R0021	InterPro IPR000620; KEGG: pol:Bpro_0672 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein
Flexsi_R0023	COGs: COG0739 Membrane protein related to metalloendopeptidase; InterPro IPR016047; KEGG: ddf:DEFDS_1597 peptidase M23/M37 family; PFAM: Peptidase M23; SPTR: Peptidase, M23/M37 family
Flexsi_R0025	KEGG: efa:EF1336 response regulator; SPTR: Response regulator
Flexsi_R0026	COGs: COG1251 NAD(P)H-nitrite reductase; InterPro IPR013027; KEGG: ddf:DEFDS_0241 FAD-dependent pyridine nucleotide-disulphide oxidoreductase family protein; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Ferredoxin--NAD(+) reductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase family protein
Flexsi_R0028	COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: apo:Arcpr_0052 protein of unknown function UPF0047; PFAM: Uncharacterised protein family UPF0047; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047
Flexsi_R0029	KEGG: cni:Calni_2037 transposase IS4 family protein; SPTR: Transposase IS4 family protein
Flexsi_R0031	COGs: COG0821 Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis; HAMAP: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; InterPro IPR004588; KEGG: hor:Hore_07760 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type; SPTR: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; TIGRFAM: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, bacterial-type
Flexsi_R0032	COGs: COG0052 Ribosomal protein S2; InterPro IPR001865:IPR005706; KEGG: ddf:DEFDS_0051 30S ribosomal protein S2; PFAM: Ribosomal protein S2; SPTR: 30S ribosomal protein S2; TIGRFAM: Ribosomal protein S2, bacteria/mitochondria/plastid
Flexsi_R0033	COGs: COG2070 Dioxygenase related to 2-nitropropane dioxygenase; InterPro IPR004136; KEGG: dap:Dacet_2039 putative 2-nitropropane dioxygenase; PFAM: 2-nitropropane dioxygenase, NPD; SPTR: Putative 2-nitropropane dioxygenase
Flexsi_R0036	InterPro IPR005358; KEGG: dap:Dacet_1011 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein
Flexsi_R0037	InterPro IPR019270; KEGG: cli:Clim_0721 hypothetical protein; PFAM: Protein of unknown function DUF2283; SPTR: Putative uncharacterized protein
Flexsi_R0038	COGs: COG3216 conserved hypothetical protein; InterPro IPR018639; KEGG: ddf:DEFDS_1705 hypothetical protein; PFAM: Protein of unknown function DUF2062; SPTR: Putative uncharacterized protein; manually curated
Flexsi_R0049	InterPro IPR002941; KEGG: bfr:BF0639 DNA methyltransferase; PFAM: DNA methylase N-4/N-6; SPTR: DNA methyltransferase
Flexsi_R0053	InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein
Flexsi_R0054	COGs: COG0036 Pentose-5-phosphate-3-epimerase; InterPro IPR000056; KEGG: dap:Dacet_0440 ribulose-phosphate 3-epimerase; PFAM: Ribulose-phosphate 3-epimerase; PRIAM: Ribulose-phosphate 3-epimerase; SPTR: Ribulose-phosphate 3-epimerase; TIGRFAM: Ribulose-phosphate 3-epimerase