-- dump date 20140619_094248 -- class Genbank::Feature -- table feature -- table main -- field 1 id -- field 2 type -- field 3 name -- field 4 contig -- field 5 start_pos -- field 6 end_pos -- field 7 strand -- field 8 description -- field 9 chrom_position -- field 10 organism -- field 11 GeneID -- header -- id type name contig start_pos end_pos strand description chrom_position organism GeneID 717231000001 SEQ_END SEQ_END NC_015672.1 2526590 2526590 DR NC_015672.1; contig end 2526590..2526590 Flexistipes sinusarabici DSM 4947 YP_004602267.1 CDS Flexsi_0001 NC_015672.1 80 1414 D PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: dap:Dacet_2869 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain; chromosomal replication initiator protein dnaA 80..1414 Flexistipes sinusarabici DSM 4947 10816684 YP_004602268.1 CDS Flexsi_0002 NC_015672.1 1691 2797 D PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA replication and repair protein recF; KEGG: cni:Calni_0004 smc domain protein; SPTR: SMC domain protein; DNA polymerase III subunit beta 1691..2797 Flexistipes sinusarabici DSM 4947 10814288 YP_004602269.1 CDS Flexsi_0003 NC_015672.1 2816 3838 D PFAM: RecF/RecN/SMC N terminal domain; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR011557:IPR003594:IPR001241:IPR013506:IPR 006171:IPR002288; KEGG: cni:Calni_0005 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; DNA replication and repair protein RecF 2816..3838 Flexistipes sinusarabici DSM 4947 10814289 YP_004602270.1 CDS Flexsi_0004 NC_015672.1 3926 6298 D PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743:IPR002205:IPR006691; KEGG: cni:Calni_0006 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA gyrase subunit A; TIGRFAM: DNA gyrase, subunit A; DNA gyrase subunit B 3926..6298 Flexistipes sinusarabici DSM 4947 10814290 YP_004602271.1 CDS Flexsi_0005 NC_015672.1 6311 8722 D PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672:IPR020630:IPR020631; KEGG: cni:Calni_0007 5,10-methylenetetrahydrofolate dehydrogenase (nadp+); methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Bifunctional protein folD; DNA gyrase subunit A 6311..8722 Flexistipes sinusarabici DSM 4947 10814291 YP_004602272.1 CDS Flexsi_0006 NC_015672.1 8723 9574 D PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: ddf:DEFDS_0006 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; bifunctional protein folD 8723..9574 Flexistipes sinusarabici DSM 4947 10814292 YP_004602273.1 CDS Flexsi_0007 NC_015672.1 9574 10932 D PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR004416:IPR002218; KEGG: ddf:DEFDS_0007 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TIGRFAM: Glucose-inhibited division protein A; tRNA modification GTPase mnmE 9574..10932 Flexistipes sinusarabici DSM 4947 10814293 YP_004602274.1 CDS Flexsi_0008 NC_015672.1 11327 13201 D PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: ddf:DEFDS_0008 glucose inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 11327..13201 Flexistipes sinusarabici DSM 4947 10814294 YP_004602275.1 CDS Flexsi_0009 NC_015672.1 13188 13784 D PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; KEGG: ddf:DEFDS_0009 hypothetical protein; SPTR: Putative uncharacterized protein; ribosomal RNA small subunit methyltransferase G 13188..13784 Flexistipes sinusarabici DSM 4947 10814295 YP_004602276.1 CDS Flexsi_0010 NC_015672.1 13729 15189 D COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR001450; KEGG: ddf:DEFDS_0264 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin; hypothetical protein 13729..15189 Flexistipes sinusarabici DSM 4947 10814296 YP_004602277.1 CDS Flexsi_0011 NC_015672.1 15368 16438 R COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: ddf:DEFDS_0263 nitroreductase family protein; PFAM: Nitroreductase-like; SPTR: Nitroreductase family protein; 4Fe-4S ferredoxin complement(15368..16438) Flexistipes sinusarabici DSM 4947 10814297 YP_004602278.1 CDS Flexsi_0012 NC_015672.1 16496 17002 D PFAM: Nitroreductase family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: ddf:DEFDS_2106 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; nitroreductase 16496..17002 Flexistipes sinusarabici DSM 4947 10814298 YP_004602279.1 CDS Flexsi_0013 NC_015672.1 17118 17894 D PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: cni:Calni_0449 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; IclR family transcriptional regulator 17118..17894 Flexistipes sinusarabici DSM 4947 10814299 YP_004602280.1 CDS Flexsi_0014 NC_015672.1 17900 18298 D PFAM: Thioesterase superfamily; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387:IPR001478:IPR008915; KEGG: cni:Calni_1998 site-2 protease; PFAM: Peptidase M50; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Site-2 protease; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; thioesterase superfamily protein 17900..18298 Flexistipes sinusarabici DSM 4947 10814300 YP_004602281.1 CDS Flexsi_0015 NC_015672.1 18290 19351 R PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR013512:IPR013644; KEGG: cni:Calni_1999 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; membrane-associated zinc metalloprotease complement(18290..19351) Flexistipes sinusarabici DSM 4947 10814301 YP_004602282.1 CDS Flexsi_0016 NC_015672.1 19355 20509 R PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: ddf:DEFDS_0122 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase complement(19355..20509) Flexistipes sinusarabici DSM 4947 10814302 YP_004602283.1 CDS Flexsi_0017 NC_015672.1 20506 21306 R PFAM: Cytidylyltransferase family; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP: Undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: ddf:DEFDS_0121 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; phosphatidate cytidylyltransferase complement(20506..21306) Flexistipes sinusarabici DSM 4947 10814303 YP_004602284.1 CDS Flexsi_0018 NC_015672.1 21321 22037 R PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR002661:IPR015998; KEGG: ddf:DEFDS_0120 ribosome recycling factor Frr; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; undecaprenyl pyrophosphate synthase complement(21321..22037) Flexistipes sinusarabici DSM 4947 10814304 YP_004602285.1 CDS Flexsi_0019 NC_015672.1 22037 22594 R PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; COGs: COG0528 Uridylate kinase; InterPro IPR015963:IPR001048; KEGG: cni:Calni_2003 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; ribosome-recycling factor complement(22037..22594) Flexistipes sinusarabici DSM 4947 10814305 YP_004602286.1 CDS Flexsi_0020 NC_015672.1 22599 23312 R PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; KEGG: ddf:DEFDS_0118 hypothetical protein; SPTR: Putative uncharacterized protein; uridylate kinase complement(22599..23312) Flexistipes sinusarabici DSM 4947 10814306 YP_004602287.1 CDS Flexsi_0021 NC_015672.1 23296 23652 R COGs: COG0681 Signal peptidase I; InterPro IPR000223:IPR019759; KEGG: ddf:DEFDS_0117 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; hypothetical protein complement(23296..23652) Flexistipes sinusarabici DSM 4947 10814307 YP_004602288.1 CDS Flexsi_0022 NC_015672.1 23810 24394 R PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein lepA; InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842; KEGG: ddf:DEFDS_0116 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor 4; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; signal peptidase I complement(23810..24394) Flexistipes sinusarabici DSM 4947 10814308 YP_004602289.1 CDS Flexsi_0023 NC_015672.1 24406 26211 R PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: ddf:DEFDS_0115 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; GTP-binding protein lepA complement(24406..26211) Flexistipes sinusarabici DSM 4947 10814309 YP_004602290.1 CDS Flexsi_0024 NC_015672.1 26222 27547 R PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; nucleotide sugar dehydrogenase complement(26222..27547) Flexistipes sinusarabici DSM 4947 10814310 YP_004602291.1 CDS Flexsi_0025 NC_015672.1 28272 29537 D COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: toc:Toce_0299 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; transposase IS4 family protein 28272..29537 Flexistipes sinusarabici DSM 4947 10814311 YP_004602292.1 CDS Flexsi_0026 NC_015672.1 29704 30390 R PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; IstB domain-containing protein ATP-binding protein complement(29704..30390) Flexistipes sinusarabici DSM 4947 10814312 YP_004602293.1 CDS Flexsi_0027 NC_015672.1 30377 31900 R PFAM: Integrase core domain; integrase catalytic subunit complement(30377..31900) Flexistipes sinusarabici DSM 4947 10814313 YP_004602294.1 CDS Flexsi_0028 NC_015672.1 32078 32332 D InterPro IPR001450; KEGG: ddf:DEFDS_0633 2-oxoacid oxidoreductase subunit delta; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 2-oxoacid oxidoreductase, delta subunit; hypothetical protein 32078..32332 Flexistipes sinusarabici DSM 4947 10814314 YP_004602295.1 CDS Flexsi_0029 NC_015672.1 32429 32659 D PFAM: 4Fe-4S binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ddf:DEFDS_0634 2-oxoacid oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); SPTR: 2-oxoacid oxidoreductase, alpha subunit; 4Fe-4S ferredoxin 32429..32659 Flexistipes sinusarabici DSM 4947 10814315 YP_004602296.1 CDS Flexsi_0030 NC_015672.1 32652 33701 D PFAM: domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: ddf:DEFDS_0635 2-oxoacid oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoacid oxidoreductase, beta subunit; 3-methyl-2-oxobutanoate dehydrogenase 32652..33701 Flexistipes sinusarabici DSM 4947 10814316 YP_004602297.1 CDS Flexsi_0031 NC_015672.1 33711 34457 D PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: ddf:DEFDS_0636 2-oxoacid oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: 2-oxoacid oxidoreductase, gamma subunit; 2-oxoglutarate synthase 33711..34457 Flexistipes sinusarabici DSM 4947 10814317 YP_004602298.1 CDS Flexsi_0032 NC_015672.1 34457 35002 D PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; COGs: COG1254 Acylphosphatase; HAMAP: Acylphosphatase; InterPro IPR001792; KEGG: fpl:Ferp_1517 acylphosphatase; PFAM: Acylphosphatase-like; SPTR: Acylphosphatase; pyruvate/ketoisovalerate oxidoreductase 34457..35002 Flexistipes sinusarabici DSM 4947 10814318 YP_004602299.1 CDS Flexsi_0033 NC_015672.1 35006 35278 D PFAM: Acylphosphatase; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: ddf:DEFDS_1615 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: Thiamine biosynthesis protein ThiC; acylphosphatase 35006..35278 Flexistipes sinusarabici DSM 4947 10814319 YP_004602300.1 CDS Flexsi_0034 NC_015672.1 35488 36753 D PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0352 Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; InterPro IPR003733; KEGG: cni:Calni_0756 thiamine-phosphate diphosphorylase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase; TIGRFAM: Thiamine monophosphate synthase; phosphomethylpyrimidine synthase 35488..36753 Flexistipes sinusarabici DSM 4947 10814320 YP_004602301.1 CDS Flexsi_0035 NC_015672.1 36726 37370 D PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283:IPR000728:IPR010918; KEGG: dap:Dacet_2993 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; PRIAM: Thiamine-phosphate kinase; SPTR: Thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; thiamine-phosphate pyrophosphorylase 36726..37370 Flexistipes sinusarabici DSM 4947 10814321 YP_004602302.1 CDS Flexsi_0036 NC_015672.1 37367 38278 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: tye:THEYE_A1664 metal dependent hydrolase; SPTR: Metal dependent hydrolase; thiamine-monophosphate kinase 37367..38278 Flexistipes sinusarabici DSM 4947 10814322 YP_004602303.1 CDS Flexsi_0037 NC_015672.1 38279 38902 R metal dependent hydrolase complement(38279..38902) Flexistipes sinusarabici DSM 4947 10814323 YP_004602304.1 CDS Flexsi_0038 NC_015672.1 38981 39151 R COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: ddf:DEFDS_0500 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein; hypothetical protein complement(38981..39151) Flexistipes sinusarabici DSM 4947 10814324 YP_004602305.1 CDS Flexsi_0039 NC_015672.1 39446 40006 D PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; KEGG: cni:Calni_0020 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 39446..40006 Flexistipes sinusarabici DSM 4947 10814325 YP_004602306.1 CDS Flexsi_0040 NC_015672.1 40079 40975 R KEGG: dap:Dacet_0979 glycoside hydrolase family 13 domain protein; hypothetical protein complement(40079..40975) Flexistipes sinusarabici DSM 4947 10814326 YP_004602307.1 CDS Flexsi_0041 NC_015672.1 41033 41362 R InterPro IPR004193; KEGG: dap:Dacet_0980 hypothetical protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Conserved hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb); glycoside hydrolase family protein complement(41033..41362) Flexistipes sinusarabici DSM 4947 10814327 YP_004602308.1 CDS Flexsi_0042 NC_015672.1 41359 41928 R PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: cni:Calni_0017 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; glycoside hydrolase family protein complement(41359..41928) Flexistipes sinusarabici DSM 4947 10814328 YP_004602309.1 CDS Flexsi_0043 NC_015672.1 41931 42392 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: gme:Gmet_3452 hypothetical protein; SPTR: Putative uncharacterized protein; ECF subfamily RNA polymerase sigma-24 subunit complement(41931..42392) Flexistipes sinusarabici DSM 4947 10814329 YP_004602310.1 CDS Flexsi_0044 NC_015672.1 42707 43462 D PFAM: Pollen proteins Ole e I like; InterPro IPR000620; KEGG: hel:HELO_1870 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 42707..43462 Flexistipes sinusarabici DSM 4947 10814330 YP_004602311.1 CDS Flexsi_0045 NC_015672.1 43491 44369 R PFAM: EamA-like transporter family; KEGG: pfa:PF11_0207 conserved Plasmodium protein; hypothetical protein complement(43491..44369) Flexistipes sinusarabici DSM 4947 10814331 YP_004602312.1 CDS Flexsi_0046 NC_015672.1 44511 44822 D manually curated; similar to conserved Plasmodium protein; hypothetical protein 44511..44822 Flexistipes sinusarabici DSM 4947 10814332 YP_004602313.1 CDS Flexsi_0048 NC_015672.1 46705 46917 D PFAM: ATP synthase subunit C; KEGG: gur:Gura_0420 H+-transporting two-sector ATPase, E subunit; SPTR: V-type ATP synthase subunit E; H+transporting two-sector ATPase subunit C 46705..46917 Flexistipes sinusarabici DSM 4947 10814334 YP_004602314.1 CDS Flexsi_0049 NC_015672.1 46924 47466 D PFAM: ATP synthase (E/31 kDa) subunit; hypothetical protein 46924..47466 Flexistipes sinusarabici DSM 4947 10814335 YP_004602315.1 CDS Flexsi_0050 NC_015672.1 47441 48238 D InterPro IPR008218; KEGG: vacuolar H+transporting two-sector ATPase subunit F; PFAM: ATPase, V1/A1 complex, subunit F; SPTR: Vacuolar H+transporting two-sector ATPase F subunit; hypothetical protein 47441..48238 Flexistipes sinusarabici DSM 4947 10814336 YP_004602316.1 CDS Flexsi_0051 NC_015672.1 48246 48572 D PFAM: ATP synthase (F/14-kDa) subunit; COGs: COG1155 H+-ATPase subunit A; InterPro IPR004100:IPR000194; KEGG: sodium-transporting two-sector ATPase; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: Sodium-transporting two-sector ATPase; SPTR: H+transporting two-sector ATPase alpha/beta subunit central region; Vacuolar H+transporting two-sector ATPase F subunit 48246..48572 Flexistipes sinusarabici DSM 4947 10814337 YP_004602317.1 CDS Flexsi_0052 NC_015672.1 48562 50121 D PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; COGs: COG1156 H+-ATPase subunit B; InterPro IPR000194; KEGG: gur:Gura_0424 V-type ATP synthase subunit B; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; SPTR: V-type ATP synthase beta chain; sodium-transporting two-sector ATPase 48562..50121 Flexistipes sinusarabici DSM 4947 10814338 YP_004602318.1 CDS Flexsi_0053 NC_015672.1 50118 51428 D PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: V-type ATPase subunit D; PFAM: ATPase, V1/A1 complex, subunit D; SPTR: V-type ATPase, D subunit; TIGRFAM: ATPase, V1/A1 complex, subunit D; H+transporting two-sector ATPase alpha/beta subunit 50118..51428 Flexistipes sinusarabici DSM 4947 10814339 YP_004602319.1 CDS Flexsi_0054 NC_015672.1 51428 52051 D PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dap:Dacet_2033 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; V-type ATPase subunit D 51428..52051 Flexistipes sinusarabici DSM 4947 10814340 YP_004602320.1 CDS Flexsi_0055 NC_015672.1 52552 53661 D PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF3524); COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: caa:Caka_1649 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; group 1 glycosyl transferase 52552..53661 Flexistipes sinusarabici DSM 4947 10814341 YP_004602321.1 CDS Flexsi_0056 NC_015672.1 53984 55405 D PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dat:HRM2_02380 putative membrane-fusion protein; PFAM: Secretion protein HlyD; SPTR: Putative membrane-fusion protein; TIGRFAM: Secretion protein HlyD; NodT family RND efflux system outer membrane lipoprotein 53984..55405 Flexistipes sinusarabici DSM 4947 10814342 YP_004602322.1 CDS Flexsi_0057 NC_015672.1 55383 56588 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_1907 RND efflux system multidrug efflux transporter; PFAM: Acriflavin resistance protein; SPTR: RND efflux system, multidrug efflux transporter; RND family efflux transporter MFP subunit 55383..56588 Flexistipes sinusarabici DSM 4947 10814343 YP_004602323.1 CDS Flexsi_0058 NC_015672.1 56585 59707 D PFAM: AcrB/AcrD/AcrF family; KEGG: tjr:TherJR_2273 hypothetical protein; SPTR: Putative uncharacterized protein; acriflavin resistance protein 56585..59707 Flexistipes sinusarabici DSM 4947 10814344 YP_004602324.1 CDS Flexsi_0059 NC_015672.1 59727 60230 D InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 59727..60230 Flexistipes sinusarabici DSM 4947 10814345 YP_004602325.1 CDS Flexsi_0060 NC_015672.1 60459 61826 R PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(60459..61826) Flexistipes sinusarabici DSM 4947 10814346 YP_004602326.1 CDS Flexsi_0062 NC_015672.1 63873 64763 D PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; KEGG: dde:Dde_3307 hypothetical protein; SPTR: Putative uncharacterized protein; glycine betaine ABC transporter periplasmic subunit 63873..64763 Flexistipes sinusarabici DSM 4947 10814348 YP_004602327.1 CDS Flexsi_0063 NC_015672.1 64783 65457 D PFAM: Trypsin; COGs: COG1391 Glutamine synthetase adenylyltransferase; InterPro IPR005190:IPR013546; KEGG: ddf:DEFDS_2134 glutamate-ammonia ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase; SPTR: Glutamate-ammonia ligase adenylyltransferase; hypothetical protein 64783..65457 Flexistipes sinusarabici DSM 4947 10814349 YP_004602328.1 CDS Flexsi_0064 NC_015672.1 65705 68554 D PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: cni:Calni_1866 thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase; SPTR: Putative uncharacterized protein; (glutamate--ammonia-ligase) adenylyltransferase 65705..68554 Flexistipes sinusarabici DSM 4947 10814350 YP_004602329.1 CDS Flexsi_0065 NC_015672.1 68551 69108 D PFAM: Thiamine monophosphate synthase/TENI; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: dap:Dacet_0096 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; thiamine monophosphate synthase 68551..69108 Flexistipes sinusarabici DSM 4947 10814351 YP_004602330.1 CDS Flexsi_0066 NC_015672.1 69099 69884 R PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR003373:IPR002917:IPR011619:IPR 011642:IPR011640; KEGG: cni:Calni_1021 ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; IclR family transcriptional regulator complement(69099..69884) Flexistipes sinusarabici DSM 4947 10814352 YP_004602331.1 CDS Flexsi_0067 NC_015672.1 70350 72293 D PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; InterPro IPR007167; KEGG: cni:Calni_1020 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: FeoA family protein; ferrous iron transport protein B 70350..72293 Flexistipes sinusarabici DSM 4947 10814353 YP_004602332.1 CDS Flexsi_0068 NC_015672.1 72302 72586 D PFAM: FeoA domain; COGs: COG3086 Positive regulator of sigma E activity; InterPro IPR007359; KEGG: cni:Calni_1019 positive regulator of sigma e, rsec/mucc; PFAM: Positive regulator of sigma(E), RseC/MucC; SPTR: Positive regulator of sigma E, RseC/MucC; FeoA family protein 72302..72586 Flexistipes sinusarabici DSM 4947 10814354 YP_004602333.1 CDS Flexsi_0069 NC_015672.1 72558 72998 D PFAM: Positive regulator of sigma(E), RseC/MucC; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro IPR001636; KEGG: ddf:DEFDS_1861 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: SAICAR synthetase; sigma E positive regulator RseC/MucC 72558..72998 Flexistipes sinusarabici DSM 4947 10814355 YP_004602334.1 CDS Flexsi_0070 NC_015672.1 73146 74024 R PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763:IPR013027:IPR004099; KEGG: cni:Calni_0602 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: CoA-disulfide reductase; SMART: Rhodanese-like; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; phosphoribosylaminoimidazole-succinocarboxamide synthase complement(73146..74024) Flexistipes sinusarabici DSM 4947 10814356 YP_004602335.1 CDS Flexsi_0071 NC_015672.1 74041 75696 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006467:IPR006638:IPR013848:IPR 007197; KEGG: cni:Calni_0603 MiaB-like tRNA modifying enzyme; PFAM: Radical SAM; Methylthiotransferase, N-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; CoA-disulfide reductase complement(74041..75696) Flexistipes sinusarabici DSM 4947 10814357 YP_004602336.1 CDS Flexsi_0072 NC_015672.1 75686 76969 R PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; InterProIPR010043:IPR002934:IPR013546:IPR006674:IPR 002912; KEGG: ddf:DEFDS_1857 protein-P-II uridylyltransferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; PRIAM: [Protein-PII] uridylyltransferase; SPTR: [Protein-PII] uridylyltransferase; TIGRFAM: Protein-PII uridylyltransferase; MiaB-like tRNA modifying protein complement(75686..76969) Flexistipes sinusarabici DSM 4947 10814358 YP_004602337.1 CDS Flexsi_0073 NC_015672.1 77177 79768 D PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR005665:IPR003335; KEGG: ddf:DEFDS_0095 preprotein translocase subunit F; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit F; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; UTP-GlnB uridylyltransferase, GlnD 77177..79768 Flexistipes sinusarabici DSM 4947 10814359 YP_004602338.1 CDS Flexsi_0074 NC_015672.1 79770 80687 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR005791:IPR003335; KEGG: ddf:DEFDS_0094 preprotein translocase subunit D; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit D; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF complement(79770..80687) Flexistipes sinusarabici DSM 4947 10814360 YP_004602339.1 CDS Flexsi_0075 NC_015672.1 80699 82243 R PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: ddf:DEFDS_0093 preprotein translocase subunit YajC; PFAM: YajC; SPTR: Preprotein translocase subunit YajC; TIGRFAM: YajC; protein-export membrane protein SecD complement(80699..82243) Flexistipes sinusarabici DSM 4947 10814361 YP_004602340.1 CDS Flexsi_0076 NC_015672.1 82246 82575 R PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: ddf:DEFDS_0092 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; preprotein translocase subunit YajC complement(82246..82575) Flexistipes sinusarabici DSM 4947 10814362 YP_004602341.1 CDS Flexsi_0077 NC_015672.1 82568 83689 R PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; InterPro IPR003699; KEGG: dap:Dacet_2454 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; manually curated; queuine tRNA-ribosyltransferase complement(82568..83689) Flexistipes sinusarabici DSM 4947 10814363 YP_004602342.1 CDS Flexsi_0078 NC_015672.1 83710 84726 R PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0498 Threonine synthase; InterPro IPR004450:IPR001926; KEGG: dap:Dacet_2455 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; S-adenosylmethionine:tRNAribosyltransferase- isomerase complement(83710..84726) Flexistipes sinusarabici DSM 4947 10814364 YP_004602343.1 CDS Flexsi_0079 NC_015672.1 84710 86128 R PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0105 Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: cni:Calni_1237 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; PRIAM: Nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase, core; SPTR: Nucleoside diphosphate kinase; threonine synthase complement(84710..86128) Flexistipes sinusarabici DSM 4947 10814365 YP_004602344.1 CDS Flexsi_0080 NC_015672.1 86146 86559 R PFAM: Nucleoside diphosphate kinase; InterPro IPR013096; KEGG: ddf:DEFDS_2012 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; nucleoside diphosphate kinase complement(86146..86559) Flexistipes sinusarabici DSM 4947 10814366 YP_004602345.1 CDS Flexsi_0081 NC_015672.1 86600 86944 R PFAM: Cupin domain; InterPro IPR006153; KEGG: dap:Dacet_2458 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; SPTR: Sodium/hydrogen exchanger; cupin complement(86600..86944) Flexistipes sinusarabici DSM 4947 10814367 YP_004602346.1 CDS Flexsi_0082 NC_015672.1 86955 88190 R PFAM: Sodium/hydrogen exchanger family; KEGG: dap:Dacet_2459 hypothetical protein; SPTR: Putative uncharacterized protein; sodium/hydrogen exchanger complement(86955..88190) Flexistipes sinusarabici DSM 4947 10814368 YP_004602347.1 CDS Flexsi_0083 NC_015672.1 88171 89289 R KEGG: cni:Calni_0747 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(88171..89289) Flexistipes sinusarabici DSM 4947 10814369 YP_004602348.1 CDS Flexsi_0084 NC_015672.1 89361 89540 D COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; InterPro IPR003526; KEGG: cni:Calni_0748 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; hypothetical protein 89361..89540 Flexistipes sinusarabici DSM 4947 10814370 YP_004602349.1 CDS Flexsi_0085 NC_015672.1 89518 90009 D PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; COGs: COG0751 Glycyl-tRNA synthetase beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; InterPro IPR015944:IPR002311:IPR008909; KEGG: ddf:DEFDS_0236 glycyl-tRNA synthetase subunit beta; PFAM: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal; DALR anticodon binding; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase beta subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 89518..90009 Flexistipes sinusarabici DSM 4947 10814371 YP_004602350.1 CDS Flexsi_0086 NC_015672.1 90109 92175 D PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR010121:IPR002192:IPR008279:IPR000121; KEGG: ddf:DEFDS_0235 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: Pyruvate, phosphate dikinase; glycyl-tRNA synthetase subunit beta 90109..92175 Flexistipes sinusarabici DSM 4947 10814372 YP_004602351.1 CDS Flexsi_0087 NC_015672.1 92197 94818 D PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; KEGG: ddf:DEFDS_0088 hypothetical protein; SPTR: Putative uncharacterized protein; pyruvate, phosphate dikinase 92197..94818 Flexistipes sinusarabici DSM 4947 10814373 YP_004602352.1 CDS Flexsi_0088 NC_015672.1 94874 95476 D KEGG: cni:Calni_2056 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 94874..95476 Flexistipes sinusarabici DSM 4947 10814374 YP_004602353.1 CDS Flexsi_0089 NC_015672.1 95502 96011 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dap:Dacet_2810 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase; hypothetical protein 95502..96011 Flexistipes sinusarabici DSM 4947 10814375 YP_004602354.1 CDS Flexsi_0090 NC_015672.1 96052 97485 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0085 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; histidine kinase 96052..97485 Flexistipes sinusarabici DSM 4947 10814376 YP_004602355.1 CDS Flexsi_0091 NC_015672.1 97495 97857 D PFAM: Response regulator receiver domain; COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: ddf:DEFDS_0260 protein-L-isoaspartate (D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; response regulator receiver protein 97495..97857 Flexistipes sinusarabici DSM 4947 10814377 YP_004602356.1 CDS Flexsi_0092 NC_015672.1 97868 98476 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662:IPR001048; KEGG: cni:Calni_0262 N-acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; protein-L-isoaspartate(D-aspartate) O-methyltransferase complement(97868..98476) Flexistipes sinusarabici DSM 4947 10814378 YP_004602357.1 CDS Flexsi_0093 NC_015672.1 98473 99351 R PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; KEGG: cni:Calni_1417 hypothetical protein; SPTR: Putative uncharacterized protein; acetylglutamate kinase complement(98473..99351) Flexistipes sinusarabici DSM 4947 10814379 YP_004602358.1 CDS Flexsi_0094 NC_015672.1 99660 101444 D hypothetical protein 99660..101444 Flexistipes sinusarabici DSM 4947 10814380 YP_004602359.1 CDS Flexsi_0095 NC_015672.1 101500 101652 R COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cni:Calni_0924 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; hypothetical protein complement(101500..101652) Flexistipes sinusarabici DSM 4947 10814381 YP_004602360.1 CDS Flexsi_0096 NC_015672.1 101878 102345 R PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cni:Calni_0924 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; UspA domain-containing protein complement(101878..102345) Flexistipes sinusarabici DSM 4947 10814382 YP_004602361.1 CDS Flexsi_0097 NC_015672.1 102383 102850 R PFAM: Universal stress protein family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_0923 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; UspA domain-containing protein complement(102383..102850) Flexistipes sinusarabici DSM 4947 10814383 YP_004602362.1 CDS Flexsi_0098 NC_015672.1 102879 103235 R PFAM: Response regulator receiver domain; COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130; KEGG: ddf:DEFDS_0065 deoxyribonuclease TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Deoxyribonuclease, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; response regulator receiver protein complement(102879..103235) Flexistipes sinusarabici DSM 4947 10814384 YP_004602363.1 CDS Flexsi_0099 NC_015672.1 103239 104084 R PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR002304:IPR004495:IPR015413:IPR002547; KEGG: cni:Calni_0921 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; TatD family hydrolase complement(103239..104084) Flexistipes sinusarabici DSM 4947 10814385 YP_004602364.1 CDS Flexsi_0100 NC_015672.1 104093 106015 R PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: cni:Calni_0920 PSP1 domain protein; PFAM: PSP1, C-terminal; SPTR: PSP1 domain protein; methionyl-tRNA synthetase complement(104093..106015) Flexistipes sinusarabici DSM 4947 10814386 YP_004602365.1 CDS Flexsi_0101 NC_015672.1 106012 106728 R PFAM: PSP1 C-terminal conserved region; COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: dap:Dacet_2365 DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; PSP1 domain-containing protein complement(106012..106728) Flexistipes sinusarabici DSM 4947 10814387 YP_004602366.1 CDS Flexsi_0102 NC_015672.1 106715 107587 R TIGRFAM: DNA polymerase III, delta' subunit; COGs: COG0125 Thymidylate kinase; HAMAP: Thymidylate kinase; InterPro IPR018094:IPR000062; KEGG: ddf:DEFDS_0069 dTMP kinase; PFAM: Thymidylate kinase-like; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: Thymidylate kinase; DNA-directed DNA polymerase complement(106715..107587) Flexistipes sinusarabici DSM 4947 10814388 YP_004602367.1 CDS Flexsi_0103 NC_015672.1 107610 108275 R PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR005302:IPR001453; KEGG: ddf:DEFDS_0070 hypothetical protein; PFAM: Molybdopterin binding; Molybdenum cofactor sulfurase, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Molybdenum cofactor synthesis; thymidylate kinase complement(107610..108275) Flexistipes sinusarabici DSM 4947 10814389 YP_004602368.1 CDS Flexsi_0104 NC_015672.1 108262 109191 R PFAM: Probable molybdopterin binding domain; MOSC domain; TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR004607:IPR002376; KEGG: ddf:DEFDS_0168 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; PRIAM: Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase; molybdenum cofactor synthesis domain-containing protein complement(108262..109191) Flexistipes sinusarabici DSM 4947 10814390 YP_004602369.1 CDS Flexsi_0105 NC_015672.1 109274 109885 R PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733:IPR000728:IPR010918; KEGG: ddf:DEFDS_0167 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; phosphoribosylglycinamide formyltransferase complement(109274..109885) Flexistipes sinusarabici DSM 4947 10814391 YP_004602370.1 CDS Flexsi_0106 NC_015672.1 109882 110916 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; InterPro IPR001789; KEGG: ddf:DEFDS_0166 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; phosphoribosylformylglycinamidine cyclo-ligase complement(109882..110916) Flexistipes sinusarabici DSM 4947 10814392 YP_004602371.1 CDS Flexsi_0107 NC_015672.1 110918 112276 R PFAM: Response regulator receiver domain; KEGG: cni:Calni_0657 hypothetical protein; SPTR: Putative uncharacterized protein; response regulator receiver complement(110918..112276) Flexistipes sinusarabici DSM 4947 10814393 YP_004602372.1 CDS Flexsi_0108 NC_015672.1 112251 112631 R PFAM: CheW-like domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR003594:IPR002545:IPR001789:IPR 004105; KEGG: ddf:DEFDS_0164 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(112251..112631) Flexistipes sinusarabici DSM 4947 10814394 YP_004602373.1 CDS Flexsi_0109 NC_015672.1 112612 115008 R PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: cni:Calni_0655 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; CheA signal transduction histidine kinase complement(112612..115008) Flexistipes sinusarabici DSM 4947 10814395 YP_004602374.1 CDS Flexsi_0110 NC_015672.1 115011 117182 R PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: psm:PSM_A2230 purine-binding chemotaxis protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: Purine-binding chemotaxis protein; methyl-accepting chemotaxis sensory transducer complement(115011..117182) Flexistipes sinusarabici DSM 4947 10814396 YP_004602375.1 CDS Flexsi_0111 NC_015672.1 117196 117672 R PFAM: CheW-like domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: ddf:DEFDS_0161 twitching motility two-component system response regulator PilH; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Twitching motility two-component system response regulator PilH; CheW protein complement(117196..117672) Flexistipes sinusarabici DSM 4947 10814397 YP_004602376.1 CDS Flexsi_0112 NC_015672.1 117666 118031 R PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_0652 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; response regulator receiver protein complement(117666..118031) Flexistipes sinusarabici DSM 4947 10814398 YP_004602377.1 CDS Flexsi_0113 NC_015672.1 118044 119294 R PFAM: Response regulator receiver domain; COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004821:IPR001980:IPR004820; KEGG: cni:Calni_0650 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; response regulator receiver protein complement(118044..119294) Flexistipes sinusarabici DSM 4947 10814399 YP_004602378.1 CDS Flexsi_0114 NC_015672.1 119390 119863 R PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398:IPR016065; KEGG: ddf:DEFDS_0157 DNA methylase; PFAM: Protein of unknown function methylase putative; SPTR: DNA methylase; TIGRFAM: Conserved hypothetical protein CHP00095; manually curated; phosphopantetheine adenylyltransferase complement(119390..119863) Flexistipes sinusarabici DSM 4947 10814400 YP_004602379.1 CDS Flexsi_0115 NC_015672.1 119860 120396 R PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; COGs: COG1243 Histone acetyltransferase; InterPro IPR006638:IPR007197; KEGG: dap:Dacet_3015 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; methyltransferase complement(119860..120396) Flexistipes sinusarabici DSM 4947 10814401 YP_004602380.1 CDS Flexsi_0116 NC_015672.1 120317 121336 R PFAM: Radical SAM superfamily; COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR011907:IPR000999:IPR001159; KEGG: cni:Calni_1228 RNase III; PFAM: Ribonuclease III; Double-stranded RNA binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial; radical SAM protein complement(120317..121336) Flexistipes sinusarabici DSM 4947 10814402 YP_004602381.1 CDS Flexsi_0117 NC_015672.1 121329 122009 R PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568:IPR014030:IPR014031; KEGG: ddf:DEFDS_0154 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; ribonuclease 3 complement(121329..122009) Flexistipes sinusarabici DSM 4947 10814403 YP_004602382.1 CDS Flexsi_0118 NC_015672.1 122018 123253 R PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; HAMAP: Acyl carrier protein (ACP); InterPro IPR003231:IPR006163; KEGG: ddf:DEFDS_0153 acyl carrier protein ACP; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); 3-oxoacyl-(acyl-carrier-protein) synthase 2 complement(122018..123253) Flexistipes sinusarabici DSM 4947 10814404 YP_004602383.1 CDS Flexsi_0119 NC_015672.1 123306 123542 R PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198; KEGG: cni:Calni_1225 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; acyl carrier protein complement(123306..123542) Flexistipes sinusarabici DSM 4947 10814405 YP_004602384.1 CDS Flexsi_0120 NC_015672.1 123579 124322 R PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: cni:Calni_1224 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; SPTR: (Acyl-carrier-protein) S-malonyltransferase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; 3-oxoacyl-(acyl-carrier-protein) reductase complement(123579..124322) Flexistipes sinusarabici DSM 4947 10814406 YP_004602385.1 CDS Flexsi_0121 NC_015672.1 124315 125250 R PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: cni:Calni_1223 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); malonyl CoA-acyl carrier protein transacylase complement(124315..125250) Flexistipes sinusarabici DSM 4947 10814407 YP_004602386.1 CDS Flexsi_0122 NC_015672.1 125271 126248 R PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; HAMAP: Phospholipid biosynthesis protein, PlsX like; InterPro IPR012281:IPR003664; KEGG: ddf:DEFDS_0149 fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis plsX protein; SPTR: Phosphate acyltransferase; TIGRFAM: Phospholipid biosynthesis protein, PlsX like; 3-oxoacyl-ACP synthase complement(125271..126248) Flexistipes sinusarabici DSM 4947 10814408 YP_004602387.1 CDS Flexsi_0123 NC_015672.1 126289 127365 R PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; COGs: COG0333 Ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: ddf:DEFDS_0148 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; phosphate acyltransferase complement(126289..127365) Flexistipes sinusarabici DSM 4947 10814409 YP_004602388.1 CDS Flexsi_0124 NC_015672.1 127372 127554 R PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: cni:Calni_1220 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: Putative uncharacterized protein; 50S ribosomal protein L32 complement(127372..127554) Flexistipes sinusarabici DSM 4947 10814410 YP_004602389.1 CDS Flexsi_0125 NC_015672.1 127557 128075 R PFAM: Uncharacterized ACR, COG1399; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_0619 aspartate transaminase; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aspartate transaminase; hypothetical protein complement(127557..128075) Flexistipes sinusarabici DSM 4947 10814411 YP_004602390.1 CDS Flexsi_0126 NC_015672.1 128291 129595 R PFAM: Aminotransferase class I and II; COGs: COG4276 conserved hypothetical protein; KEGG: dap:Dacet_2029 hypothetical protein; SPTR: Putative uncharacterized protein; aspartate transaminase complement(128291..129595) Flexistipes sinusarabici DSM 4947 10814412 YP_004602391.1 CDS Flexsi_0127 NC_015672.1 129801 130253 D COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; InterPro IPR005882:IPR005835:IPR001451; KEGG: dap:Dacet_2836 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: Bifunctional protein glmU; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; hypothetical protein 129801..130253 Flexistipes sinusarabici DSM 4947 10814413 YP_004602392.1 CDS Flexsi_0128 NC_015672.1 130281 131687 D PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; InterPro IPR005855:IPR000583:IPR001347; KEGG: cni:Calni_0410 glutamine--fructose-6-phosphate transaminase; PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glutamine--fructose-6-phosphate transaminase; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 130281..131687 Flexistipes sinusarabici DSM 4947 10814414 YP_004602393.1 CDS Flexsi_0129 NC_015672.1 131690 133519 D PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); COGs: COG0038 Chloride channel protein EriC; InterPro IPR000644:IPR001807; KEGG: ddf:DEFDS_1948 chloride channel protein, CIC family; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Chloride channel protein, CIC family; glucosamine--fructose-6-phosphate aminotransferase 131690..133519 Flexistipes sinusarabici DSM 4947 10814415 YP_004602394.1 CDS Flexsi_0130 NC_015672.1 133522 135264 D PFAM: CBS domain; Voltage gated chloride channel; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: dap:Dacet_2392 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; Cl- channel voltage-gated family protein 133522..135264 Flexistipes sinusarabici DSM 4947 10814416 YP_004602395.1 CDS Flexsi_0131 NC_015672.1 135400 137457 D PFAM: UvrD/REP helicase; COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; InterPro IPR003837; KEGG: ddf:DEFDS_1950 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase, C subunit; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; UvrD/REP helicase 135400..137457 Flexistipes sinusarabici DSM 4947 10814417 YP_004602396.1 CDS Flexsi_0132 NC_015672.1 137533 137829 D PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; InterPro IPR004412:IPR000120; KEGG: ddf:DEFDS_1951 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 137533..137829 Flexistipes sinusarabici DSM 4947 10814418 YP_004602397.1 CDS Flexsi_0133 NC_015672.1 137851 139311 D PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; InterPro IPR009288; KEGG: cni:Calni_1048 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; glutamyl-tRNA(Gln) amidotransferase subunit A 137851..139311 Flexistipes sinusarabici DSM 4947 10814419 YP_004602398.1 CDS Flexsi_0134 NC_015672.1 139341 139748 D PFAM: AIG2-like family; COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; InterPro IPR004413:IPR006075:IPR006107:IPR018027; KEGG: ddf:DEFDS_1934 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; AIG2 family protein 139341..139748 Flexistipes sinusarabici DSM 4947 10814420 YP_004602399.1 CDS Flexsi_0135 NC_015672.1 139760 141196 D PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; InterPro IPR017515:IPR004360; KEGG: dap:Dacet_2428 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: Methylmalonyl-CoA epimerase; aspartyl/glutamyl-tRNA amidotransferase subunit B 139760..141196 Flexistipes sinusarabici DSM 4947 10814421 YP_004602400.1 CDS Flexsi_0136 NC_015672.1 141206 141607 D PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: ddf:DEFDS_1937 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; methylmalonyl-CoA epimerase 141206..141607 Flexistipes sinusarabici DSM 4947 10814422 YP_004602401.1 CDS Flexsi_0137 NC_015672.1 141993 143201 R PFAM: Rhodanese-like domain; COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: ddf:DEFDS_1456 phosphate/phosphonate ABC transporter substrate-binding protein; SPTR: Phosphate/phosphonate ABC transporter, substrate-binding protein; rhodanese-like protein complement(141993..143201) Flexistipes sinusarabici DSM 4947 10814423 YP_004602402.1 CDS Flexsi_0138 NC_015672.1 143954 144514 D PFAM: NMT1/THI5 like; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; phosphate/phosphonate ABC transporter substrate-binding protein 143954..144514 Flexistipes sinusarabici DSM 4947 10814424 YP_004602403.1 CDS Flexsi_0139 NC_015672.1 144702 146021 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(144702..146021) Flexistipes sinusarabici DSM 4947 10814425 YP_004602404.1 CDS Flexsi_0141 NC_015672.1 146279 146485 D manually curated; hypothetical protein 146279..146485 Flexistipes sinusarabici DSM 4947 10814427 YP_004602405.1 CDS Flexsi_0143 NC_015672.1 147822 148739 R PFAM: Transposase DDE domain; KEGG: aeh:Mlg_0129 transposase, IS4 family protein; SPTR: Transposase, IS4 family; hypothetical protein complement(147822..148739) Flexistipes sinusarabici DSM 4947 10814429 YP_004602406.1 CDS Flexsi_0144 NC_015672.1 148743 149498 R KEGG: drt:Dret_0154 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; transposase, IS4 family protein complement(148743..149498) Flexistipes sinusarabici DSM 4947 10814430 YP_004602407.1 CDS Flexsi_0145 NC_015672.1 149847 150038 R PFAM: Protein of unknown function (DUF1271); COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: nth:Nther_1561 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase; 4Fe-4S ferredoxin complement(149847..150038) Flexistipes sinusarabici DSM 4947 10814431 YP_004602408.1 CDS Flexsi_0146 NC_015672.1 150472 151107 D PFAM: NADPH-dependent FMN reductase; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; NADPH-dependent FMN reductase 150472..151107 Flexistipes sinusarabici DSM 4947 10814432 YP_004602409.1 CDS Flexsi_0147 NC_015672.1 151382 152431 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_1448 RND efflux system multidrug efflux transporter; PFAM: Acriflavin resistance protein; SPTR: RND efflux system, multidrug efflux transporter; transposase IS4 family protein complement(151382..152431) Flexistipes sinusarabici DSM 4947 10814433 YP_004602410.1 CDS Flexsi_0148 NC_015672.1 152637 155702 R PFAM: AcrB/AcrD/AcrF family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_1449 RND efflux system membrane fusion protein; PFAM: Secretion protein HlyD; SPTR: RND efflux system, membrane fusion protein; TIGRFAM: Secretion protein HlyD; acriflavin resistance protein complement(152637..155702) Flexistipes sinusarabici DSM 4947 10814434 YP_004602411.1 CDS Flexsi_0149 NC_015672.1 155803 156945 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_1450 RND efflux system outer membrane lipoprotein; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein; RND family efflux transporter MFP subunit complement(155803..156945) Flexistipes sinusarabici DSM 4947 10814435 YP_004602412.1 CDS Flexsi_0150 NC_015672.1 156942 158219 R PFAM: Outer membrane efflux protein; InterPro IPR001647; KEGG: tcx:Tcr_1884 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; outer membrane efflux protein complement(156942..158219) Flexistipes sinusarabici DSM 4947 10814436 YP_004602413.1 CDS Flexsi_0151 NC_015672.1 158216 158848 R PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR013096; KEGG: hor:Hore_08490 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; regulatory protein TetR complement(158216..158848) Flexistipes sinusarabici DSM 4947 10814437 YP_004602414.1 CDS Flexsi_0152 NC_015672.1 159367 159684 D PFAM: Cupin domain; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: ddf:DEFDS_1073 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cupin 159367..159684 Flexistipes sinusarabici DSM 4947 10814438 YP_004602415.1 CDS Flexsi_0153 NC_015672.1 159735 160967 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; NADH dehydrogenase (ubiquinone) 159735..160967 Flexistipes sinusarabici DSM 4947 10814439 YP_004602416.1 CDS Flexsi_0154 NC_015672.1 161115 162434 D PFAM: Transposase DDE domain; InterPro IPR000620; KEGG: dak:DaAHT2_2429 protein of unknown function DUF6 transmembrane; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; transposase IS4 family protein 161115..162434 Flexistipes sinusarabici DSM 4947 10814440 YP_004602417.1 CDS Flexsi_0155 NC_015672.1 162854 163753 D PFAM: EamA-like transporter family; KEGG: dtu:Dtur_1639 nitroreductase; SPTR: Nitroreductase; hypothetical protein 162854..163753 Flexistipes sinusarabici DSM 4947 10814441 YP_004602418.1 CDS Flexsi_0156 NC_015672.1 164296 164493 D PFAM: Nitroreductase family; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; nitroreductase 164296..164493 Flexistipes sinusarabici DSM 4947 10814442 YP_004602419.1 CDS Flexsi_0157 NC_015672.1 164615 166291 D PFAM: Transposase DDE domain; COGs: COG3189 conserved hypothetical protein; InterPro IPR007438; KEGG: noc:Noc_2090 hypothetical protein; PFAM: Protein of unknown function DUF488; SPTR: Putative uncharacterized protein; transposase IS4 family protein 164615..166291 Flexistipes sinusarabici DSM 4947 10814443 YP_004602420.1 CDS Flexsi_0158 NC_015672.1 166414 166782 D PFAM: Protein of unknown function, DUF488; hypothetical protein 166414..166782 Flexistipes sinusarabici DSM 4947 10814444 YP_004602421.1 CDS Flexsi_0159 NC_015672.1 166811 166957 D COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); HAMAP: Trigger factor; InterPro IPR005215:IPR008881:IPR001179:IPR008880; KEGG: ddf:DEFDS_0192 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor; hypothetical protein 166811..166957 Flexistipes sinusarabici DSM 4947 10814445 YP_004602422.1 CDS Flexsi_0160 NC_015672.1 167196 168575 D PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: ATP-dependent Clp protease proteolytic subunit; InterPro IPR001907; KEGG: cni:Calni_1041 ATP-dependent clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; TIGRFAM: Peptidase S14, ClpP; trigger factor Tig 167196..168575 Flexistipes sinusarabici DSM 4947 10814446 YP_004602423.1 CDS Flexsi_0161 NC_015672.1 168575 169162 D PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR004487:IPR003593:IPR010603:IPR013093:IPR 019489; KEGG: ddf:DEFDS_0194 ATP-dependent Clp protease ATP-binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: Clp protease, ATP-binding subunit ClpX; ATP-dependent Clp protease proteolytic subunit 168575..169162 Flexistipes sinusarabici DSM 4947 10814447 YP_004602424.1 CDS Flexsi_0162 NC_015672.1 169227 170468 D PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269; KEGG: ddf:DEFDS_0195 ATP-dependent Lon protease; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; ATP-dependent Clp protease ATP-binding subunit clpX 169227..170468 Flexistipes sinusarabici DSM 4947 10814448 YP_004602425.1 CDS Flexsi_0163 NC_015672.1 170538 172871 D PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: ddf:DEFDS_0196 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; anti-sigma H sporulation factor LonB 170538..172871 Flexistipes sinusarabici DSM 4947 10814449 YP_004602426.1 CDS Flexsi_0164 NC_015672.1 172871 173095 D PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: cni:Calni_1837 hypothetical protein; PFAM: Protein of unknown function DUF111; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF111; 30S ribosomal protein S21 172871..173095 Flexistipes sinusarabici DSM 4947 10814450 YP_004602427.1 CDS Flexsi_0165 NC_015672.1 173127 174287 R PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: dau:Daud_0314 appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; SPTR: Appr-1-p processing domain protein; hypothetical protein complement(173127..174287) Flexistipes sinusarabici DSM 4947 10814451 YP_004602428.1 CDS Flexsi_0166 NC_015672.1 174397 174927 D PFAM: Macro domain; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: dde:Dde_0146 putative glycine betaine/L-proline ABC transporter solute-binding protein; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Putative glycine betaine/L-proline ABC transporter, solute-binding protein; Appr-1-p processing protein 174397..174927 Flexistipes sinusarabici DSM 4947 10814452 YP_004602429.1 CDS Flexsi_0167 NC_015672.1 175129 176052 R PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein; COGs: COG0499 S-adenosylhomocysteine hydrolase; HAMAP: Adenosylhomocysteinase; InterPro IPR000043:IPR015878; KEGG: cni:Calni_0569 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; glycine betaine ABC transporter periplasmic subunit complement(175129..176052) Flexistipes sinusarabici DSM 4947 10814453 YP_004602430.1 CDS Flexsi_0168 NC_015672.1 176766 178178 R PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR013751; KEGG: ddf:DEFDS_1929 thiolase family protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: Thiolase family protein; adenosylhomocysteinase complement(176766..178178) Flexistipes sinusarabici DSM 4947 10814454 YP_004602431.1 CDS Flexsi_0169 NC_015672.1 178519 179979 D PFAM: Thiolase, C-terminal domain; manually curated; propanoyl-CoA C-acyltransferase 178519..179979 Flexistipes sinusarabici DSM 4947 10814455 YP_004602432.1 CDS Flexsi_0171 NC_015672.1 180332 181651 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(180332..181651) Flexistipes sinusarabici DSM 4947 10814457 YP_004602433.1 CDS Flexsi_0173 NC_015672.1 182977 184092 D COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218; KEGG: ddf:DEFDS_0830 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; hypothetical protein 182977..184092 Flexistipes sinusarabici DSM 4947 10814459 YP_004602434.1 CDS Flexsi_0174 NC_015672.1 184197 185207 R PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG1151 6Fe-6S prismane cluster-containing protein; HAMAP: Hybrid cluster protein; InterPro IPR010048:IPR004137; KEGG: cni:Calni_0496 hybrid cluster protein; PFAM: Prismane; SPTR: Hydroxylamine reductase; TIGRFAM: Hybrid cluster protein; phospho-2-dehydro-3-deoxyheptonate aldolase complement(184197..185207) Flexistipes sinusarabici DSM 4947 10814460 YP_004602435.1 CDS Flexsi_0175 NC_015672.1 185502 187172 R PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: cni:Calni_0497 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp/Fnr family; hydroxylamine reductase complement(185502..187172) Flexistipes sinusarabici DSM 4947 10814461 YP_004602436.1 CDS Flexsi_0176 NC_015672.1 187277 187936 D PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; KEGG: ddf:DEFDS_0027 hypothetical protein; SPTR: Putative uncharacterized protein; Crp/Fnr family transcriptional regulator 187277..187936 Flexistipes sinusarabici DSM 4947 10814462 YP_004602437.1 CDS Flexsi_0177 NC_015672.1 187933 189960 D COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: tdn:Suden_0117 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; hypothetical protein 187933..189960 Flexistipes sinusarabici DSM 4947 10814463 YP_004602438.1 CDS Flexsi_0178 NC_015672.1 190668 191459 D PFAM: Periplasmic binding protein; COGs: COG4139 ABC-type cobalamin transport system permease component; InterPro IPR000522; KEGG: aoe:Clos_0916 transport system permease protein; PFAM: Bacterial transport system permease protein; SPTR: Transport system permease protein; ABC transporter periplasmic protein 190668..191459 Flexistipes sinusarabici DSM 4947 10814464 YP_004602439.1 CDS Flexsi_0179 NC_015672.1 191429 192415 D PFAM: FecCD transport family; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: cpr:CPR_0781 iron(III) dicitrate transport permease-like protein YusV; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Ferrichrome transport ATP-binding protein FhuC; ABC transporter 191429..192415 Flexistipes sinusarabici DSM 4947 10814465 YP_004602440.1 CDS Flexsi_0180 NC_015672.1 192412 193164 D PFAM: ABC transporter; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: cni:Calni_1879 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; iron-chelate-transporting ATPase 192412..193164 Flexistipes sinusarabici DSM 4947 10814466 YP_004602441.1 CDS Flexsi_0181 NC_015672.1 193777 195669 D PFAM: TonB-dependent Receptor Plug Domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: hpc:HPPC_06595 siderophore-mediated iron transport protein (TonB); PFAM: Gram-negative bacterial tonB protein; SPTR: Siderophore-mediated iron transport protein (TonB); TIGRFAM: TonB, C-terminal; TonB-dependent receptor plug 193777..195669 Flexistipes sinusarabici DSM 4947 10814467 YP_004602442.1 CDS Flexsi_0182 NC_015672.1 195650 196423 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: ddf:DEFDS_0172 cytochrome c-type biogenesis protein; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR: Cytochrome c-type biogenesis protein; TonB family protein 195650..196423 Flexistipes sinusarabici DSM 4947 10814468 YP_004602443.1 CDS Flexsi_0183 NC_015672.1 196415 197149 R PFAM: Cytochrome C biogenesis protein transmembrane region; COGs: COG2332 Cytochrome c-type biogenesis protein CcmE; InterPro IPR004329; KEGG: cni:Calni_1688 CcmE/CycJ protein; PFAM: CcmE/CycJ protein; SPTR: CcmE/CycJ protein; cytochrome c biogenesis protein transmembrane subunit complement(196415..197149) Flexistipes sinusarabici DSM 4947 10814469 YP_004602444.1 CDS Flexsi_0184 NC_015672.1 197273 197677 D PFAM: CcmE; InterPro IPR003660; KEGG: gme:Gmet_0018 metal dependent phosphohydrolase; PFAM: HAMP linker domain; SMART: HAMP linker domain; SPTR: Metal dependent phosphohydrolase; CcmE/CycJ protein 197273..197677 Flexistipes sinusarabici DSM 4947 10814470 YP_004602445.1 CDS Flexsi_0185 NC_015672.1 198367 199179 R PFAM: HAMP domain; Protein of unknown function (DUF3365); histidine kinase HAMP region domain-containing protein complement(198367..199179) Flexistipes sinusarabici DSM 4947 10814471 YP_004602446.1 CDS Flexsi_0186 NC_015672.1 199179 199664 R COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: cni:Calni_0600 methylated-DNA/protein-cysteinemethyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR:Methylated-DNA/protein-cysteinemethyltransfera se; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; hypothetical protein complement(199179..199664) Flexistipes sinusarabici DSM 4947 10814472 YP_004602447.1 CDS Flexsi_0187 NC_015672.1 199779 200249 R PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR006027:IPR001678; KEGG: ddf:DEFDS_1996 tRNA/rRNA methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; SPTR: tRNA/rRNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase complement(199779..200249) Flexistipes sinusarabici DSM 4947 10814473 YP_004602448.1 CDS Flexsi_0188 NC_015672.1 200331 201512 R PFAM: NOL1/NOP2/sun family; NusB family; COGs: COG0501 Zn-dependent protease with chaperone function; HAMAP: protease htpX; InterPro IPR001915; KEGG: ddf:DEFDS_1995 peptidase M48 family; PFAM: Peptidase M48, Ste24p; SPTR: Protease HtpX homolog; Fmu (Sun) domain-containing protein complement(200331..201512) Flexistipes sinusarabici DSM 4947 10814474 YP_004602449.1 CDS Flexsi_0189 NC_015672.1 201505 202353 R PFAM: Peptidase family M48; COGs: COG1852 conserved hypothetical protein; InterPro IPR002829; KEGG: cni:Calni_0072 hypothetical protein; PFAM: Protein of unknown function DUF116; SPTR: Putative uncharacterized protein; protease htpX complement(201505..202353) Flexistipes sinusarabici DSM 4947 10814475 YP_004602450.1 CDS Flexsi_0190 NC_015672.1 202364 203149 R PFAM: Protein of unknown function DUF116; COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: ddf:DEFDS_1994 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; hypothetical protein complement(202364..203149) Flexistipes sinusarabici DSM 4947 10814476 YP_004602451.1 CDS Flexsi_0191 NC_015672.1 203139 204116 R PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_1993 aminotransferase I and II; PFAM: Aminotransferase, class I/II; PRIAM: LL-diaminopimelate aminotransferase; SPTR: Aminotransferase, I and II; methionyl-tRNA formyltransferase complement(203139..204116) Flexistipes sinusarabici DSM 4947 10814477 YP_004602452.1 CDS Flexsi_0192 NC_015672.1 204149 205378 R PFAM: Aminotransferase class I and II; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: ddf:DEFDS_1992 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein; TIGRFAM: Cation efflux protein; LL-diaminopimelate aminotransferase complement(204149..205378) Flexistipes sinusarabici DSM 4947 10814478 YP_004602453.1 CDS Flexsi_0193 NC_015672.1 205428 206342 R PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; InterPro IPR018710; KEGG: ddf:DEFDS_1990 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein; cation diffusion facilitator family transporter complement(205428..206342) Flexistipes sinusarabici DSM 4947 10814479 YP_004602454.1 CDS Flexsi_0194 NC_015672.1 206339 207259 R PFAM: Predicted membrane protein (DUF2232); COGs: COG0238 Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; InterPro IPR001648; KEGG: dap:Dacet_0006 30S ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; hypothetical protein complement(206339..207259) Flexistipes sinusarabici DSM 4947 10814480 YP_004602455.1 CDS Flexsi_0195 NC_015672.1 207307 207534 R PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: ddf:DEFDS_1988 single-strand DNA binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; 30S ribosomal protein S18 complement(207307..207534) Flexistipes sinusarabici DSM 4947 10814481 YP_004602456.1 CDS Flexsi_0196 NC_015672.1 207560 207994 R PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; InterPro IPR000529:IPR020814; KEGG: cni:Calni_0515 ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; single-strand binding protein complement(207560..207994) Flexistipes sinusarabici DSM 4947 10814482 YP_004602457.1 CDS Flexsi_0197 NC_015672.1 207998 208465 R PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006225:IPR002942:IPR006145; KEGG: ddf:DEFDS_1986 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; 30S ribosomal protein S6 complement(207998..208465) Flexistipes sinusarabici DSM 4947 10814483 YP_004602458.1 CDS Flexsi_0198 NC_015672.1 208600 209523 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; InterPro IPR000440; KEGG: ddf:DEFDS_1985 NADH-quinone oxidoreductase subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; SPTR: NADH-quinone oxidoreductase subunit; RluA family pseudouridine synthase 208600..209523 Flexistipes sinusarabici DSM 4947 10814484 YP_004602459.1 CDS Flexsi_0199 NC_015672.1 209743 210096 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; InterPro IPR006138:IPR006137; KEGG: cni:Calni_0313 NADH dehydrogenase subunit B; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; NAD(P)H-quinone oxidoreductase subunit 3 209743..210096 Flexistipes sinusarabici DSM 4947 10814485 YP_004602460.1 CDS Flexsi_0200 NC_015672.1 210087 210563 D PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR001268; KEGG: cni:Calni_0314 NADH dehydrogenase subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; SPTR: NADH-quinone oxidoreductase subunit C; NAD(P)H-quinone oxidoreductase subunit K 210087..210563 Flexistipes sinusarabici DSM 4947 10814486 YP_004602461.1 CDS Flexsi_0201 NC_015672.1 210575 211069 D PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; InterPro IPR010219:IPR001135; KEGG: ddf:DEFDS_1982 NADH-quinone oxidoreductase subunit D; PFAM: NADH-quinone oxidoreductase, subunit D; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 210575..211069 Flexistipes sinusarabici DSM 4947 10814487 YP_004602462.1 CDS Flexsi_0202 NC_015672.1 211086 212291 D PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: cni:Calni_0316 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase subunit E; NAD(P)H-quinone oxidoreductase subunit H 211086..212291 Flexistipes sinusarabici DSM 4947 10814488 YP_004602463.1 CDS Flexsi_0203 NC_015672.1 212304 212804 D PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575:IPR001450; KEGG: ddf:DEFDS_1980 NADH-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, F subunit; NADH dehydrogenase (quinone) 212304..212804 Flexistipes sinusarabici DSM 4947 10814489 YP_004602464.1 CDS Flexsi_0204 NC_015672.1 212814 214604 D PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR019574:IPR006963:IPR006656:IPR 006657; KEGG: ddf:DEFDS_1979 NADH-quinone oxidoreductase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, G subunit; NADH dehydrogenase (quinone) 212814..214604 Flexistipes sinusarabici DSM 4947 10814490 YP_004602465.1 CDS Flexsi_0205 NC_015672.1 214621 216918 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G; COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; InterPro IPR001694; KEGG: ddf:DEFDS_1978 NADH-quinone oxidoreductase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit H; NADH dehydrogenase (quinone) 214621..216918 Flexistipes sinusarabici DSM 4947 10814491 YP_004602466.1 CDS Flexsi_0206 NC_015672.1 216982 217968 D PFAM: NADH dehydrogenase; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); HAMAP: NADH-quinone oxidoreductase, chain I; InterPro IPR010226:IPR001450; KEGG: ddf:DEFDS_1977 NADH-quinone oxidoreductase subunit I; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: NADH dehydrogenase; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; NAD(P)H-quinone oxidoreductase subunit 1 216982..217968 Flexistipes sinusarabici DSM 4947 10814492 YP_004602467.1 CDS Flexsi_0207 NC_015672.1 217979 218413 D PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: cni:Calni_0322 NADH dehydrogenase subunit J; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; SPTR: NADH dehydrogenase subunit J; NAD(P)H-quinone oxidoreductase subunit I 217979..218413 Flexistipes sinusarabici DSM 4947 10814493 YP_004602468.1 CDS Flexsi_0208 NC_015672.1 218417 218917 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; InterPro IPR001133; KEGG: ddf:DEFDS_1975 NADH-quinone oxidoreductase subunit K; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; SPTR: NADH-quinone oxidoreductase subunit K; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 218417..218917 Flexistipes sinusarabici DSM 4947 10814494 YP_004602469.1 CDS Flexsi_0209 NC_015672.1 218930 219229 D PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003945:IPR001516:IPR001750; KEGG: ddf:DEFDS_1974 NADH-quinone oxidoreductase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, L subunit; TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; NAD(P)H-quinone oxidoreductase subunit 4L 218930..219229 Flexistipes sinusarabici DSM 4947 10814495 YP_004602470.1 CDS Flexsi_0210 NC_015672.1 219239 221152 D PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR001750; KEGG: ddf:DEFDS_1973 NADH-quinone oxidoreductase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, M subunit; TIGRFAM: NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit L 219239..221152 Flexistipes sinusarabici DSM 4947 10814496 YP_004602471.1 CDS Flexsi_0211 NC_015672.1 221163 222656 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; InterPro IPR010096:IPR001750; KEGG: cni:Calni_0326 NADH dehydrogenase subunit N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit N; TIGRFAM: NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit M 221163..222656 Flexistipes sinusarabici DSM 4947 10814497 YP_004602472.1 CDS Flexsi_0212 NC_015672.1 222667 224094 D PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; InterPro IPR003251; KEGG: cni:Calni_0327 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; NAD(P)H-quinone oxidoreductase subunit 2 222667..224094 Flexistipes sinusarabici DSM 4947 10814498 YP_004602473.1 CDS Flexsi_0213 NC_015672.1 224114 224578 D PFAM: Rubrerythrin; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; InterPro IPR011128:IPR006109; KEGG: cni:Calni_0959 glycerol 3-phosphate dehydrogenase (nad(p)+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; rubrerythrin 224114..224578 Flexistipes sinusarabici DSM 4947 10814499 YP_004602474.1 CDS Flexsi_0214 NC_015672.1 225007 226002 D PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR006375:IPR005835:IPR001538; KEGG: tcx:Tcr_1678 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; glycerol-3-phosphate dehydrogenase (NAD(P)+) 225007..226002 Flexistipes sinusarabici DSM 4947 10814500 YP_004602475.1 CDS Flexsi_0215 NC_015672.1 226029 227438 D PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR004772:IPR003445; KEGG: dap:Dacet_2985 potassium uptake protein, TrkH family; PFAM: Cation transporter; SPTR: Potassium uptake protein, TrkH family; TIGRFAM: Potassium uptake protein TrkH; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 226029..227438 Flexistipes sinusarabici DSM 4947 10814501 YP_004602476.1 CDS Flexsi_0216 NC_015672.1 227442 228893 R PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: dap:Dacet_2986 TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: TrkA-N domain protein; TrkH family potassium uptake protein complement(227442..228893) Flexistipes sinusarabici DSM 4947 10814502 YP_004602477.1 CDS Flexsi_0217 NC_015672.1 228898 230241 R PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153; KEGG: pca:Pcar_0560 hypothetical protein; PFAM: Cation/H+ exchanger; SPTR: Sodium/hydrogen exchanger; TrkA-N domain-containing protein complement(228898..230241) Flexistipes sinusarabici DSM 4947 10814503 YP_004602478.1 CDS Flexsi_0218 NC_015672.1 230481 231692 D PFAM: Sodium/hydrogen exchanger family; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114:IPR000241; KEGG: dat:HRM2_18410 putative RNA methylase family protein; PFAM: Putative RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Putative uncharacterized protein; sodium/hydrogen exchanger 230481..231692 Flexistipes sinusarabici DSM 4947 10814504 YP_004602479.1 CDS Flexsi_0219 NC_015672.1 231857 232993 R PFAM: Putative RNA methylase family UPF0020; THUMP domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: ddf:DEFDS_1633 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; rRNA (guanine-N(2)-)-methyltransferase complement(231857..232993) Flexistipes sinusarabici DSM 4947 10814505 YP_004602480.1 CDS Flexsi_0220 NC_015672.1 233259 233459 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cte:CT0090 glycosy hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; SPTR: Glycosyl hydrolase, family 3; cold-shock DNA-binding domain-containing protein 233259..233459 Flexistipes sinusarabici DSM 4947 10814506 YP_004602481.1 CDS Flexsi_0221 NC_015672.1 233496 234572 R PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: sfu:Sfum_4019 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; TIGRFAM: ATP-binding cassette protein, ChvD family; glycoside hydrolase family protein complement(233496..234572) Flexistipes sinusarabici DSM 4947 10814507 YP_004602482.1 CDS Flexsi_0222 NC_015672.1 234700 236385 D PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; KEGG: ddf:DEFDS_1656 hypothetical protein; SPTR: Putative uncharacterized protein; ChvD family ATP-binding protein 234700..236385 Flexistipes sinusarabici DSM 4947 10814508 YP_004602483.1 CDS Flexsi_0223 NC_015672.1 236490 237941 R COGs: COG1217 membrane GTPase involved in stress response; InterProIPR005225:IPR006298:IPR000795:IPR004161:IPR 000640; KEGG: cni:Calni_0168 gtp-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; hypothetical protein complement(236490..237941) Flexistipes sinusarabici DSM 4947 10814509 YP_004602484.1 CDS Flexsi_0224 NC_015672.1 238166 240007 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG3671 membrane protein; KEGG: tbd:Tbd_1218 transmembrane protein; SPTR: Probable transmembrane protein; GTP-binding protein TypA 238166..240007 Flexistipes sinusarabici DSM 4947 10814510 YP_004602485.1 CDS Flexsi_0225 NC_015672.1 240004 240378 R KEGG: ddf:DEFDS_1670 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; transmembrane protein complement(240004..240378) Flexistipes sinusarabici DSM 4947 10814511 YP_004602486.1 CDS Flexsi_0226 NC_015672.1 240742 240945 D COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003018:IPR001932:IPR001734:IPR010822; KEGG: ddf:DEFDS_1669 serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; Sodium/solute symporter; SMART: Protein phosphatase 2C-related; GAF; SPTR: Serine phosphatase; hypothetical protein 240742..240945 Flexistipes sinusarabici DSM 4947 10814512 YP_004602487.1 CDS Flexsi_0227 NC_015672.1 240938 244150 D PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); InterPro IPR012861; KEGG: phe:Phep_0601 protein of unknown function DUF1634; PFAM: Protein of unknown function DUF1634; protein serine/threonine phosphatase with GAF(s) sensor(s) 240938..244150 Flexistipes sinusarabici DSM 4947 10814513 YP_004602488.1 CDS Flexsi_0228 NC_015672.1 244151 244489 R PFAM: Protein of unknown function (DUF1634); COGs: COG0730 permease; InterPro IPR002781; KEGG: ddf:DEFDS_1353 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein complement(244151..244489) Flexistipes sinusarabici DSM 4947 10814514 YP_004602489.1 CDS Flexsi_0229 NC_015672.1 244492 245313 R PFAM: Sulfite exporter TauE/SafE; KEGG: cni:Calni_1694 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(244492..245313) Flexistipes sinusarabici DSM 4947 10814515 YP_004602490.1 CDS Flexsi_0230 NC_015672.1 245872 247476 D COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: cni:Calni_0961 branched chain amino acid aminotransferase apoenzyme; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched chain amino acid aminotransferase apoenzyme; TIGRFAM: Branched-chain amino acid aminotransferase II; hypothetical protein 245872..247476 Flexistipes sinusarabici DSM 4947 10814516 YP_004602491.1 CDS Flexsi_0231 NC_015672.1 247615 248703 D PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0068 Hydrogenase maturation factor; InterPro IPR004421:IPR001792:IPR011125:IPR006070; KEGG: ddf:DEFDS_1539 Ni-Fe hydrogenase maturation protein HypF; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type; SPTR: Ni-Fe hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type; branched-chain amino acid aminotransferase 247615..248703 Flexistipes sinusarabici DSM 4947 10814517 YP_004602492.1 CDS Flexsi_0232 NC_015672.1 248700 250946 R PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR011023:IPR001678; KEGG: cni:Calni_1279 fmu (sun) domain protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Fmu (Sun) domain protein; TIGRFAM: Nop2p; (NiFe) hydrogenase maturation protein HypF complement(248700..250946) Flexistipes sinusarabici DSM 4947 10814518 YP_004602493.1 CDS Flexsi_0233 NC_015672.1 251022 252398 D PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006675:IPR003607:IPR006674; KEGG: ddf:DEFDS_1810 HAD-superfamily hydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HAD-superfamily hydrolase; TIGRFAM: HDIG; RNA methylase 251022..252398 Flexistipes sinusarabici DSM 4947 10814519 YP_004602494.1 CDS Flexsi_0234 NC_015672.1 252407 252961 R PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: ddf:DEFDS_1811 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; metal dependent phosphohydrolase complement(252407..252961) Flexistipes sinusarabici DSM 4947 10814520 YP_004602495.1 CDS Flexsi_0235 NC_015672.1 252958 253905 R PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; InterPro IPR000620; KEGG: cni:Calni_0245 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; prolipoprotein diacylglyceryl transferase complement(252958..253905) Flexistipes sinusarabici DSM 4947 10814521 YP_004602496.1 CDS Flexsi_0236 NC_015672.1 253906 254790 R PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: dap:Dacet_1633 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(253906..254790) Flexistipes sinusarabici DSM 4947 10814522 YP_004602497.1 CDS Flexsi_0237 NC_015672.1 254784 255686 R PFAM: EamA-like transporter family; hypothetical protein complement(254784..255686) Flexistipes sinusarabici DSM 4947 10814523 YP_004602498.1 CDS Flexsi_0238 NC_015672.1 255928 256056 D COGs: COG0280 Phosphotransacetylase; InterPro IPR004614:IPR002505; KEGG: cni:Calni_0766 phosphotransacetylase; PFAM: Phosphate acetyl/butaryl transferase; PRIAM: Phosphate acetyltransferase; SPTR: Phosphotransacetylase; TIGRFAM: Phosphate acetyltransferase; hypothetical protein 255928..256056 Flexistipes sinusarabici DSM 4947 10814524 YP_004602499.1 CDS Flexsi_0239 NC_015672.1 256105 257091 D PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; COGs: COG0282 Acetate kinase; HAMAP: Acetate kinase; InterPro IPR004372:IPR000890; KEGG: cni:Calni_0765 acetate kinase; PFAM: Acetate/butyrate kinase; PRIAM: Acetate kinase; SPTR: Acetate kinase; TIGRFAM: Acetate kinase; phosphate acetyltransferase 256105..257091 Flexistipes sinusarabici DSM 4947 10814525 YP_004602500.1 CDS Flexsi_0240 NC_015672.1 257109 258356 D PFAM: Acetokinase family; TIGRFAM: acetate kinase; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR010066:IPR003593:IPR003439:IPR013563; KEGG: dap:Dacet_2504 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; acetate kinase 257109..258356 Flexistipes sinusarabici DSM 4947 10814526 YP_004602501.1 CDS Flexsi_0241 NC_015672.1 258599 259609 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR010066:IPR003593:IPR003439:IPR013563; KEGG: dal:Dalk_1531 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; oligopeptide/dipeptide ABC transporter ATPase complement(258599..259609) Flexistipes sinusarabici DSM 4947 10814527 YP_004602502.1 CDS Flexsi_0242 NC_015672.1 259609 260589 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dap:Dacet_2506 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; oligopeptide/dipeptide ABC transporter ATPase complement(259609..260589) Flexistipes sinusarabici DSM 4947 10814528 YP_004602503.1 CDS Flexsi_0243 NC_015672.1 260597 261514 R PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dap:Dacet_2507 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; ABC transporter complement(260597..261514) Flexistipes sinusarabici DSM 4947 10814529 YP_004602504.1 CDS Flexsi_0244 NC_015672.1 261514 262491 R PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: drt:Dret_1361 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Extracellular solute-binding protein family 5; ABC transporter complement(261514..262491) Flexistipes sinusarabici DSM 4947 10814530 YP_004602505.1 CDS Flexsi_0245 NC_015672.1 262549 264102 R PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: ddf:DEFDS_1594 molybdopterin biosynthesis protein MoeA; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis protein MoeA; TIGRFAM: Molybdenum cofactor synthesis; ABC transporter periplasmic protein complement(262549..264102) Flexistipes sinusarabici DSM 4947 10814531 YP_004602506.1 CDS Flexsi_0246 NC_015672.1 264361 265581 D PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: ddf:DEFDS_1595 ribosomal large subunit pseudouridine synthase A; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase A; molybdenum cofactor synthesis domain-containing protein 264361..265581 Flexistipes sinusarabici DSM 4947 10814532 YP_004602507.1 CDS Flexsi_0247 NC_015672.1 265559 266248 D PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; KEGG: dap:Dacet_0352 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; pseudouridine synthase 265559..266248 Flexistipes sinusarabici DSM 4947 10814533 YP_004602508.1 CDS Flexsi_0248 NC_015672.1 266417 266713 R PFAM: Class III cytochrome C family; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR004559:IPR006638:IPR007197:IPR010723; KEGG: ddf:DEFDS_2032 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; hypothetical protein complement(266417..266713) Flexistipes sinusarabici DSM 4947 10814534 YP_004602509.1 CDS Flexsi_0249 NC_015672.1 266707 267795 R PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ddf:DEFDS_0328 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; oxygen-independent coproporphyrinogen III oxidase complement(266707..267795) Flexistipes sinusarabici DSM 4947 10814535 YP_004602510.1 CDS Flexsi_0250 NC_015672.1 267842 269572 D PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0329 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; xenobiotic-transporting ATPase 267842..269572 Flexistipes sinusarabici DSM 4947 10814536 YP_004602511.1 CDS Flexsi_0251 NC_015672.1 269569 270645 D PFAM: Glycosyl transferases group 1; KEGG: fph:Fphi_1263 hypothetical protein; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase 269569..270645 Flexistipes sinusarabici DSM 4947 10814537 YP_004602512.1 CDS Flexsi_0252 NC_015672.1 270662 271351 R PFAM: RmlD substrate binding domain; InterPro IPR001173; KEGG: sus:Acid_5170 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; hypothetical protein complement(270662..271351) Flexistipes sinusarabici DSM 4947 10814538 YP_004602513.1 CDS Flexsi_0253 NC_015672.1 271656 272435 D PFAM: Glycosyl transferase family 2; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: cpb:Cphamn1_1914 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; family 2 glycosyl transferase 271656..272435 Flexistipes sinusarabici DSM 4947 10814539 YP_004602514.1 CDS Flexsi_0254 NC_015672.1 272432 273316 D PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; manually curated; glucose-1-phosphate thymidylyltransferase 272432..273316 Flexistipes sinusarabici DSM 4947 10814540 YP_004602515.1 CDS Flexsi_0256 NC_015672.1 273533 274282 D PFAM: Methyltransferase domain; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0336 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; type 12 methyltransferase 273533..274282 Flexistipes sinusarabici DSM 4947 10814542 YP_004602516.1 CDS Flexsi_0257 NC_015672.1 274279 275382 D PFAM: Glycosyl transferases group 1; InterPro IPR007016; KEGG: dvm:DvMF_3018 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; group 1 glycosyl transferase 274279..275382 Flexistipes sinusarabici DSM 4947 10814543 YP_004602517.1 CDS Flexsi_0258 NC_015672.1 275363 276568 D PFAM: O-Antigen ligase; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0337 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; O-antigen polymerase 275363..276568 Flexistipes sinusarabici DSM 4947 10814544 YP_004602518.1 CDS Flexsi_0259 NC_015672.1 276546 277634 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dap:Dacet_1893 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; group 1 glycosyl transferase 276546..277634 Flexistipes sinusarabici DSM 4947 10814545 YP_004602519.1 CDS Flexsi_0260 NC_015672.1 277631 278755 D PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0338 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 277631..278755 Flexistipes sinusarabici DSM 4947 10814546 YP_004602520.1 CDS Flexsi_0261 NC_015672.1 278752 279831 D PFAM: Glycosyl transferases group 1; manually curated; group 1 glycosyl transferase 278752..279831 Flexistipes sinusarabici DSM 4947 10814547 YP_004602521.1 CDS Flexsi_0263 NC_015672.1 281671 282282 R COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: ddf:DEFDS_0333 ADP-heptose:LPS heptosyltransferase II; PFAM: Glycosyl transferase, family 9; SPTR: ADP-heptose:LPS heptosyltransferase II; hypothetical protein complement(281671..282282) Flexistipes sinusarabici DSM 4947 10814549 YP_004602522.1 CDS Flexsi_0264 NC_015672.1 282279 283286 R PFAM: Glycosyltransferase family 9 (heptosyltransferase); KEGG: ddf:DEFDS_0981 hypothetical protein; SPTR: Putative uncharacterized protein; glycosyl transferase family protein complement(282279..283286) Flexistipes sinusarabici DSM 4947 10814550 YP_004602523.1 CDS Flexsi_0265 NC_015672.1 283430 284044 D COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: ddf:DEFDS_0982 hypothetical protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Putative uncharacterized protein; hypothetical protein 283430..284044 Flexistipes sinusarabici DSM 4947 10814551 YP_004602524.1 CDS Flexsi_0266 NC_015672.1 284041 285564 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: pca:Pcar_1271 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; integral membrane sensor signal transduction histidine kinase 284041..285564 Flexistipes sinusarabici DSM 4947 10814552 YP_004602525.1 CDS Flexsi_0267 NC_015672.1 285695 286411 D PFAM: Glycosyl transferase family 2; COGs: COG3952 membrane protein; InterPro IPR011499; KEGG: ddf:DEFDS_0984 lipid A biosynthesis domain protein; PFAM: Lipid A biosynthesis, N-terminal; SPTR: Lipid A biosynthesis domain protein; family 2 glycosyl transferase 285695..286411 Flexistipes sinusarabici DSM 4947 10814553 YP_004602526.1 CDS Flexsi_0268 NC_015672.1 286404 286691 D PFAM: Lipid A Biosynthesis N-terminal domain; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: ddf:DEFDS_0985 hypothetical protein; PFAM: Glycosyl transferase, family 39; SPTR: Putative uncharacterized protein; lipid A biosynthesis domain-containing protein 286404..286691 Flexistipes sinusarabici DSM 4947 10814554 YP_004602527.1 CDS Flexsi_0269 NC_015672.1 286678 288294 D PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gem:GM21_1846 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; glycosyl transferase family protein 286678..288294 Flexistipes sinusarabici DSM 4947 10814555 YP_004602528.1 CDS Flexsi_0270 NC_015672.1 288291 288809 D PFAM: Nitroreductase family; InterPro IPR000524; KEGG: ddf:DEFDS_0767 hypothetical protein; PFAM: HTH transcriptional regulator, GntR; SPTR: Putative uncharacterized protein; nitroreductase 288291..288809 Flexistipes sinusarabici DSM 4947 10814556 YP_004602529.1 CDS Flexsi_0271 NC_015672.1 289394 290311 D PFAM: Bacterial regulatory proteins, gntR family; COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: dsa:Desal_3220 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; PRIAM: 5-oxoprolinase (ATP-hydrolyzing); SPTR: 5-oxoprolinase (ATP-hydrolyzing); regulatory protein GntR 289394..290311 Flexistipes sinusarabici DSM 4947 10814557 YP_004602530.1 CDS Flexsi_0272 NC_015672.1 290329 292308 D PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region; COGs: COG0146 N-methylhydantoinase B/acetone carboxylase alpha subunit; InterPro IPR003692; KEGG: ddf:DEFDS_0769 N-methylhydantoinase B; PFAM: Hydantoinase B/oxoprolinase; PRIAM: 5-oxoprolinase (ATP-hydrolyzing); SPTR: N-methylhydantoinase B; 5-oxoprolinase 290329..292308 Flexistipes sinusarabici DSM 4947 10814558 YP_004602531.1 CDS Flexsi_0273 NC_015672.1 292308 293879 D PFAM: Hydantoinase B/oxoprolinase; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dat:HRM2_46640 TRAP-type C4-dicarboxylate transport system periplasmic component; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP-type C4-dicarboxylate transport system periplasmic component; 5-oxoprolinase 292308..293879 Flexistipes sinusarabici DSM 4947 10814559 YP_004602532.1 CDS Flexsi_0274 NC_015672.1 293912 294883 D PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0771 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; family 7 extracellular solute-binding protein 293912..294883 Flexistipes sinusarabici DSM 4947 10814560 YP_004602533.1 CDS Flexsi_0275 NC_015672.1 294880 295380 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: dat:HRM2_46660 putative TRAP C4-dicarboxylate transport system permease DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Putative TRAP C4-dicarboxylate transport system permease DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 294880..295380 Flexistipes sinusarabici DSM 4947 10814561 YP_004602534.1 CDS Flexsi_0276 NC_015672.1 295355 296719 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: cni:Calni_0451 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Integral membrane sensor signal transduction histidine kinase; TRAP dicarboxylate transporter subunit DctM 295355..296719 Flexistipes sinusarabici DSM 4947 10814562 YP_004602535.1 CDS Flexsi_0277 NC_015672.1 296691 298229 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cni:Calni_0450 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; integral membrane sensor signal transduction histidine kinase complement(296691..298229) Flexistipes sinusarabici DSM 4947 10814563 YP_004602536.1 CDS Flexsi_0278 NC_015672.1 298226 298921 R PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0348 Polyferredoxin; KEGG: cni:Calni_1875 ferredoxin-type protein, NapH/maun family; SPTR: Ferredoxin-type protein, NapH/MauN family; winged helix family two component transcriptional regulator complement(298226..298921) Flexistipes sinusarabici DSM 4947 10814564 YP_004602537.1 CDS Flexsi_0279 NC_015672.1 298952 299755 R TIGRFAM: ferredoxin-type protein, NapH/MauN family; InterPro IPR001450; KEGG: ddf:DEFDS_1822 periplasmic nitrate reductase NapG; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Periplasmic nitrate reductase NapG; ferredoxin-type protein, NapH/maun family complement(298952..299755) Flexistipes sinusarabici DSM 4947 10814565 YP_004602538.1 CDS Flexsi_0280 NC_015672.1 300567 301322 R TIGRFAM: MauM/NapG family ferredoxin-type protein; KEGG: cni:Calni_1873 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin complement(300567..301322) Flexistipes sinusarabici DSM 4947 10814566 YP_004602539.1 CDS Flexsi_0281 NC_015672.1 301319 301630 R PFAM: NapD protein; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006311:IPR019546:IPR006963:IPR006656:IPR 006657; KEGG: ddf:DEFDS_1820 periplasmic nitrate reductase NapA; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Periplasmic nitrate reductase NapA; hypothetical protein complement(301319..301630) Flexistipes sinusarabici DSM 4947 10814567 YP_004602540.1 CDS Flexsi_0282 NC_015672.1 301688 304081 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; KEGG: dap:Dacet_0085 hypothetical protein; SPTR: Putative uncharacterized protein; nitrate reductase complement(301688..304081) Flexistipes sinusarabici DSM 4947 10814568 YP_004602541.1 CDS Flexsi_0283 NC_015672.1 304110 304505 R KEGG: ddf:DEFDS_1818 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein complement(304110..304505) Flexistipes sinusarabici DSM 4947 10814569 YP_004602542.1 CDS Flexsi_0284 NC_015672.1 304697 306298 D KEGG: ddf:DEFDS_1817 hypothetical protein; SPTR: Putative uncharacterized protein; multiheme C-type cytochrome 304697..306298 Flexistipes sinusarabici DSM 4947 10814570 YP_004602543.1 CDS Flexsi_0285 NC_015672.1 306410 306925 D COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR006055:IPR013520; KEGG: ddf:DEFDS_0125 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; hypothetical protein 306410..306925 Flexistipes sinusarabici DSM 4947 10814571 YP_004602544.1 CDS Flexsi_0286 NC_015672.1 307078 307704 R PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR018658:IPR000031; KEGG: ddf:DEFDS_0021 hypothetical protein; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; DNA polymerase III subunit epsilon complement(307078..307704) Flexistipes sinusarabici DSM 4947 10814572 YP_004602545.1 CDS Flexsi_0287 NC_015672.1 308028 308783 R PFAM: AIR carboxylase; COGs: COG0293 23S rRNA methylase; HAMAP: Ribosomal RNA large subunit methyltransferase E; InterPro IPR002877; KEGG: ddf:DEFDS_0022 cell division protein methyltransferase FtsJ; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Cell division protein methyltransferase FtsJ; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase complement(308028..308783) Flexistipes sinusarabici DSM 4947 10814573 YP_004602546.1 CDS Flexsi_0288 NC_015672.1 308773 309366 R PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; COGs: COG1530 Ribonuclease G and E; InterPro IPR004659:IPR003029:IPR019307; KEGG: cni:Calni_1377 RNase G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; SPTR: RNAse G; TIGRFAM: Ribonuclease E/G; ribosomal RNA large subunit methyltransferase E complement(308773..309366) Flexistipes sinusarabici DSM 4947 10814574 YP_004602547.1 CDS Flexsi_0289 NC_015672.1 309366 310901 R PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; KEGG: ddf:DEFDS_0024 mutual gliding protein A; SPTR: Mutual gliding protein A; ribonuclease, Rne/Rng family complement(309366..310901) Flexistipes sinusarabici DSM 4947 10814575 YP_004602548.1 CDS Flexsi_0290 NC_015672.1 310905 311486 R PFAM: ADP-ribosylation factor family; InterPro IPR004942; KEGG: cni:Calni_1375 roadblock/lc7 family protein; PFAM: Dynein light chain-related; SPTR: Roadblock/LC7 family protein; mutual gliding protein A complement(310905..311486) Flexistipes sinusarabici DSM 4947 10814576 YP_004602549.1 CDS Flexsi_0291 NC_015672.1 311498 311992 R PFAM: Roadblock/LC7 domain; COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: Recombination protein recR; InterPro IPR000093:IPR006154:IPR015967:IPR006171; KEGG: cni:Calni_1374 DNA replication and repair protein RecR; PFAM: Toprim domain; Zinc finger C4-type, RecR; SMART: Toprim domain, subgroup; SPTR: DNA replication and repair protein RecR; TIGRFAM: RecR protein; Roadblock/LC7 family protein complement(311498..311992) Flexistipes sinusarabici DSM 4947 10814577 YP_004602550.1 CDS Flexsi_0292 NC_015672.1 312113 312712 R PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; COGs: COG0718 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: ddf:DEFDS_0142 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein DEFDS_0142; TIGRFAM: Uncharacterised protein family UPF0133; Recombination protein recR complement(312113..312712) Flexistipes sinusarabici DSM 4947 10814578 YP_004602551.1 CDS Flexsi_0293 NC_015672.1 312716 313030 R PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763:IPR003593:IPR003959; KEGG: ddf:DEFDS_0141 DNA polymerase III gamma/tau subunits; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: DNA polymerase III, gamma/tau subunits; TIGRFAM: DNA polymerase III, subunit gamma/ tau; hypothetical protein complement(312716..313030) Flexistipes sinusarabici DSM 4947 10814579 YP_004602552.1 CDS Flexsi_0294 NC_015672.1 313135 314739 R PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; DNA polymerase III subunits gamma and tau complement(313135..314739) Flexistipes sinusarabici DSM 4947 10814580 YP_004602553.1 CDS Flexsi_0295 NC_015672.1 314983 316302 R PFAM: Transposase DDE domain; transposase IS4 family protein complement(314983..316302) Flexistipes sinusarabici DSM 4947 10814581 YP_004602554.1 CDS Flexsi_0296 NC_015672.1 316635 316856 D KEGG: cni:Calni_1818 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 316635..316856 Flexistipes sinusarabici DSM 4947 10814582 YP_004602555.1 CDS Flexsi_0297 NC_015672.1 317414 317575 D COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320:IPR001638; KEGG: cni:Calni_1817 amino acid abc transporter substrate-binding protein, paat family; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Amino acid ABC transporter substrate-binding protein, PAAT family; hypothetical protein 317414..317575 Flexistipes sinusarabici DSM 4947 10814583 YP_004602556.1 CDS Flexsi_0298 NC_015672.1 317597 318406 D PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: ddf:DEFDS_2027 amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ABC transporter periplasmic subunit 317597..318406 Flexistipes sinusarabici DSM 4947 10814584 YP_004602557.1 CDS Flexsi_0299 NC_015672.1 318426 319370 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_2026 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter, ATP-binding protein; polar amino acid ABC transporter inner membrane subunit 318426..319370 Flexistipes sinusarabici DSM 4947 10814585 YP_004602558.1 CDS Flexsi_0300 NC_015672.1 319363 320106 D PFAM: ABC transporter; InterPro IPR001041; KEGG: ddf:DEFDS_2025 hypothetical protein; PFAM: Ferredoxin; SPTR: Putative uncharacterized protein; phosphonate-transporting ATPase 319363..320106 Flexistipes sinusarabici DSM 4947 10814586 YP_004602559.1 CDS Flexsi_0301 NC_015672.1 320108 321760 D PFAM: 2Fe-2S iron-sulfur cluster binding domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0145 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component response regulator; ferredoxin 320108..321760 Flexistipes sinusarabici DSM 4947 10814587 YP_004602560.1 CDS Flexsi_0302 NC_015672.1 321750 322124 R PFAM: Response regulator receiver domain; COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR005001:IPR001163; KEGG: ddf:DEFDS_0146 small nuclear ribonucleoprotein; PFAM: Like-Sm ribonucleoprotein, core; SPTR: Small nuclear ribonucleoprotein; TIGRFAM: Host factor Hfq; response regulator receiver protein complement(321750..322124) Flexistipes sinusarabici DSM 4947 10814588 YP_004602561.1 CDS Flexsi_0303 NC_015672.1 322130 322633 R PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; RNA chaperone Hfq complement(322130..322633) Flexistipes sinusarabici DSM 4947 10814589 YP_004602562.1 CDS Flexsi_0304 NC_015672.1 322718 323983 R transposase IS4 family protein complement(322718..323983) Flexistipes sinusarabici DSM 4947 10814590 YP_004602563.1 CDS Flexsi_0305 NC_015672.1 324718 325029 D PFAM: Nucleotidyltransferase domain; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: chy:CHY_2535 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative toxin-antitoxin system, antitoxin component; DNA polymerase beta domain-containing protein 324718..325029 Flexistipes sinusarabici DSM 4947 10814592 YP_004602564.1 CDS Flexsi_0306 NC_015672.1 325022 325369 D PFAM: Protein of unknown function DUF86; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593:IPR002078:IPR002197; KEGG: vvu:VV2_0683 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator; hypothetical protein 325022..325369 Flexistipes sinusarabici DSM 4947 10814593 YP_004602565.1 CDS Flexsi_0307 NC_015672.1 325634 326584 D PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: glo:Glov_1530 TrkA-C domain protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR: TrkA-C domain protein; Fis family sigma-54 specific transcriptional regulator 325634..326584 Flexistipes sinusarabici DSM 4947 10814594 YP_004602566.1 CDS Flexsi_0308 NC_015672.1 326581 328353 D PFAM: Citrate transporter; TrkA-C domain; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006240:IPR000760; KEGG: nwa:Nwat_0721 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; TrkA-C domain-containing protein 326581..328353 Flexistipes sinusarabici DSM 4947 10814595 YP_004602567.1 CDS Flexsi_0309 NC_015672.1 328355 329194 D PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; HAMAP: Sulfate adenylyltransferase subunit 2; InterPro IPR011784:IPR002500; KEGG: mca:MCA2629 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; 3'(2'),5'-bisphosphate nucleotidase 328355..329194 Flexistipes sinusarabici DSM 4947 10814596 YP_004602568.1 CDS Flexsi_0310 NC_015672.1 329482 330393 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; InterPro IPR008815; KEGG: sun:SUN_0718 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; sulfate adenylyltransferase 329482..330393 Flexistipes sinusarabici DSM 4947 10814597 YP_004602569.1 CDS Flexsi_0311 NC_015672.1 330439 330702 D PFAM: S23 ribosomal protein; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; HAMAP: Sulfate adenylyltransferase subunit 1; InterPro IPR011779:IPR002891:IPR000795; KEGG: aeh:Mlg_2345 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal; Protein synthesis factor, GTP-binding; PRIAM: Sulfate adenylyltransferase., Adenylyl-sulfate kinase; SPTR: Adenylylsulfate kinase; TIGRFAM: Sulphate adenylyltransferase, large subunit; Adenylylsulphate kinase, C-terminal; S23 ribosomal protein 330439..330702 Flexistipes sinusarabici DSM 4947 10814598 YP_004602570.1 CDS Flexsi_0312 NC_015672.1 330816 332759 D PFAM: Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; InterPro IPR001584; KEGG: ppd:Ppro_1841 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase, catalytic region; sulfate adenylyltransferase 330816..332759 Flexistipes sinusarabici DSM 4947 10814599 YP_004602571.1 CDS Flexsi_0313 NC_015672.1 332891 333820 R PFAM: Integrase core domain; InterPro IPR002514; KEGG: kol:Kole_0767 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911; SPTR: Putative uncharacterized protein; integrase catalytic subunit complement(332891..333820) Flexistipes sinusarabici DSM 4947 10814600 YP_004602572.1 CDS Flexsi_0314 NC_015672.1 333877 334185 R PFAM: Transposase; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: tba:TERMP_00544 putative nucleotidyltransferase; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein; transposase IS3/IS911 family protein complement(333877..334185) Flexistipes sinusarabici DSM 4947 10814601 YP_004602573.1 CDS Flexsi_0315 NC_015672.1 334442 334756 D PFAM: Nucleotidyltransferase domain; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: kol:Kole_0232 protein of unknown function DUF86; PFAM: Protein of unknown function DUF86; SPTR: Putative uncharacterized protein; DNA polymerase beta domain-containing protein 334442..334756 Flexistipes sinusarabici DSM 4947 10814602 YP_004602574.1 CDS Flexsi_0316 NC_015672.1 334749 334970 D PFAM: Protein of unknown function DUF86; KEGG: ere:EUBREC_0492 hypothetical protein; hypothetical protein 334749..334970 Flexistipes sinusarabici DSM 4947 10814603 YP_004602575.1 CDS Flexsi_0317 NC_015672.1 335411 335749 D COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 335411..335749 Flexistipes sinusarabici DSM 4947 10814604 YP_004602576.1 CDS Flexsi_0318 NC_015672.1 335781 337616 R PFAM: Transposase DDE domain; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bpf:BpOF4_18990 putative major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative major facilitator superfamily protein; transposase IS4 family protein complement(335781..337616) Flexistipes sinusarabici DSM 4947 10814605 YP_004602577.1 CDS Flexsi_0319 NC_015672.1 337817 338905 R PFAM: Major Facilitator Superfamily; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR003251:IPR008217; KEGG: pmo:Pmob_0860 hypothetical protein; PFAM: Protein of unknown function DUF125, transmembrane; Rubrerythrin; SPTR: Putative uncharacterized protein; major facilitator superfamily protein complement(337817..338905) Flexistipes sinusarabici DSM 4947 10814606 YP_004602578.1 CDS Flexsi_0320 NC_015672.1 339316 340197 D PFAM: VIT family; Rubrerythrin; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: ddf:DEFDS_1443 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Signal transduction protein; hypothetical protein 339316..340197 Flexistipes sinusarabici DSM 4947 10814607 YP_004602579.1 CDS Flexsi_0321 NC_015672.1 340215 340655 R PFAM: CBS domain; InterPro IPR013096; KEGG: ddf:DEFDS_1702 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; putative signal transduction protein with CBS domains complement(340215..340655) Flexistipes sinusarabici DSM 4947 10814608 YP_004602580.1 CDS Flexsi_0322 NC_015672.1 340652 341017 R PFAM: Cupin domain; InterPro IPR011701; KEGG: MFS general substrate transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; cupin complement(340652..341017) Flexistipes sinusarabici DSM 4947 10814609 YP_004602581.1 CDS Flexsi_0323 NC_015672.1 341119 342318 D PFAM: Major Facilitator Superfamily; COGs: COG1942 Uncharacterized protein 4-oxalocrotonate tautomerase homolog; InterPro IPR018191:IPR004370; KEGG: dze:Dd1591_4074 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; SPTR: 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase, subgroup; major facilitator superfamily protein 341119..342318 Flexistipes sinusarabici DSM 4947 10814610 YP_004602582.1 CDS Flexsi_0324 NC_015672.1 342299 342499 D PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: tye:THEYE_A1086 hypothetical protein; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0066; 4-oxalocrotonate tautomerase 342299..342499 Flexistipes sinusarabici DSM 4947 10814611 YP_004602583.1 CDS Flexsi_0325 NC_015672.1 342505 342903 R PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family; InterPro IPR001845; KEGG: ddf:DEFDS_0052 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; hypothetical protein complement(342505..342903) Flexistipes sinusarabici DSM 4947 10814612 YP_004602584.1 CDS Flexsi_0326 NC_015672.1 343704 343967 D PFAM: Bacterial regulatory protein, arsR family; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_0053 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; regulatory protein ArsR 343704..343967 Flexistipes sinusarabici DSM 4947 10814613 YP_004602585.1 CDS Flexsi_0327 NC_015672.1 343967 345271 D PFAM: Outer membrane efflux protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_0054 acriflavin resistance protein, AcrA/AcrE family; PFAM: Secretion protein HlyD; SPTR: Acriflavin resistance protein, AcrA/AcrE family; TIGRFAM: Secretion protein HlyD; outer membrane efflux protein 343967..345271 Flexistipes sinusarabici DSM 4947 10814614 YP_004602586.1 CDS Flexsi_0328 NC_015672.1 345291 346478 D PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_0055 acriflavin resistance protein, AcrB/AcrD/AcrF family; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein, AcrB/AcrD/AcrF family; RND family efflux transporter MFP subunit 345291..346478 Flexistipes sinusarabici DSM 4947 10814615 YP_004602587.1 CDS Flexsi_0329 NC_015672.1 346479 349754 D PFAM: AcrB/AcrD/AcrF family; KEGG: ddf:DEFDS_0056 hypothetical protein; SPTR: Putative uncharacterized protein; acriflavin resistance protein 346479..349754 Flexistipes sinusarabici DSM 4947 10814616 YP_004602588.1 CDS Flexsi_0330 NC_015672.1 349771 349962 D PFAM: Protein of unknown function (DUF2892); InterPro IPR011701; KEGG: dap:Dacet_2401 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; hypothetical protein 349771..349962 Flexistipes sinusarabici DSM 4947 10814617 YP_004602589.1 CDS Flexsi_0331 NC_015672.1 350267 351421 D PFAM: Major Facilitator Superfamily; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ddf:DEFDS_1609 hypothetical protein; PFAM: Patatin; SPTR: Putative uncharacterized protein; major facilitator superfamily protein 350267..351421 Flexistipes sinusarabici DSM 4947 10814618 YP_004602590.1 CDS Flexsi_0332 NC_015672.1 351506 352273 R PFAM: Patatin-like phospholipase; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ddf:DEFDS_1608 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; patatin complement(351506..352273) Flexistipes sinusarabici DSM 4947 10814619 YP_004602591.1 CDS Flexsi_0333 NC_015672.1 352850 353521 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ddf:DEFDS_1607 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; GntR family transcriptional regulator 352850..353521 Flexistipes sinusarabici DSM 4947 10814620 YP_004602592.1 CDS Flexsi_0334 NC_015672.1 353524 354189 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: ddf:DEFDS_1606 phosphoribosylformylglycinamidine synthase small subunit; PFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; SPTR: Phosphoribosylformylglycinamidine synthase, small subunit; TIGRFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; GntR family transcriptional regulator 353524..354189 Flexistipes sinusarabici DSM 4947 10814621 YP_004602593.1 CDS Flexsi_0335 NC_015672.1 354308 354541 D PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein; COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; HAMAP: Phosphoribosylformylglycinamidine synthase 1; InterPro IPR010075:IPR011698; KEGG: cni:Calni_1057 phosphoribosylformylglycinamidine synthase subunit I; PFAM: CobB/CobQ-like glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase subunit I; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase PurS 354308..354541 Flexistipes sinusarabici DSM 4947 10814622 YP_004602594.1 CDS Flexsi_0336 NC_015672.1 354561 355256 D PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; HAMAP: Phosphoribosylformylglycinamidine synthase 2; InterPro IPR010074:IPR000728:IPR010918; KEGG: cni:Calni_1056 phosphoribosylformylglycinamidine synthase subunit II; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase 2; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase 1 354561..355256 Flexistipes sinusarabici DSM 4947 10814623 YP_004602595.1 CDS Flexsi_0337 NC_015672.1 355257 357488 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR005854:IPR000583:IPR000836; KEGG: ddf:DEFDS_1603 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; TIGRFAM: Amidophosphoribosyl transferase; phosphoribosylformylglycinamidine synthase 2 355257..357488 Flexistipes sinusarabici DSM 4947 10814624 YP_004602596.1 CDS Flexsi_0338 NC_015672.1 357485 358876 D PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; KEGG: cni:Calni_1054 hypothetical protein; SPTR: Putative uncharacterized protein; amidophosphoribosyltransferase 357485..358876 Flexistipes sinusarabici DSM 4947 10814625 YP_004602597.1 CDS Flexsi_0339 NC_015672.1 359014 359220 D COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: ddf:DEFDS_0528 caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase, family 3; SPTR: Caffeoyl-CoA O-methyltransferase; hypothetical protein 359014..359220 Flexistipes sinusarabici DSM 4947 10814626 YP_004602598.1 CDS Flexsi_0340 NC_015672.1 359465 360097 D PFAM: O-methyltransferase; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: cni:Calni_1780 peptidase U32; PFAM: Peptidase U32; SPTR: Peptidase U32; O-methyltransferase family protein 359465..360097 Flexistipes sinusarabici DSM 4947 10814627 YP_004602599.1 CDS Flexsi_0341 NC_015672.1 360084 361286 D PFAM: Peptidase family U32; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: DNA ligase; InterProIPR001679:IPR013839:IPR004150:IPR004149:IPR 001357:IPR013840:IPR003583; KEGG: ddf:DEFDS_0530 NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; peptidase U32 360084..361286 Flexistipes sinusarabici DSM 4947 10814628 YP_004602600.1 CDS Flexsi_0342 NC_015672.1 361283 363262 D PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; COGs: COG1806 conserved hypothetical protein; HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted; InterPro IPR005177; KEGG: cni:Calni_1778 hypothetical protein; PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; SPTR: Putative phosphotransferase Calni_1778; DNA ligase 361283..363262 Flexistipes sinusarabici DSM 4947 10814629 YP_004602601.1 CDS Flexsi_0343 NC_015672.1 363262 364074 D PFAM: Domain of unknown function (DUF299); InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; phosphotransferase ydiA 363262..364074 Flexistipes sinusarabici DSM 4947 10814630 YP_004602602.1 CDS Flexsi_0344 NC_015672.1 364196 365515 D PFAM: Transposase DDE domain; KEGG: sat:SYN_03116 hypothetical protein; SPTR: Hypothetical exported protein; transposase IS4 family protein 364196..365515 Flexistipes sinusarabici DSM 4947 10814631 YP_004602603.1 CDS Flexsi_0345 NC_015672.1 365947 367164 D InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; hypothetical protein 365947..367164 Flexistipes sinusarabici DSM 4947 10814632 YP_004602604.1 CDS Flexsi_0346 NC_015672.1 367906 368679 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS116/IS110/IS902 family protein 367906..368679 Flexistipes sinusarabici DSM 4947 10814633 YP_004602605.1 CDS Flexsi_0349 NC_015672.1 370755 371788 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: ppn:Palpr_2333 glycosyl transferase, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: Putative acetyltransferase/glucosyltransferase; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; transposase IS116/IS110/IS902 family protein join(370755..371183,371183..371788) Flexistipes sinusarabici DSM 4947 10814635 YP_004602606.1 CDS Flexsi_0350 NC_015672.1 372204 372929 R PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; InterPro IPR018831; KEGG: dal:Dalk_1594 hypothetical protein; PFAM: Protein of unknown function NKWYS; SPTR: Putative uncharacterized protein; WecB/TagA/CpsF family glycosyl transferase complement(372204..372929) Flexistipes sinusarabici DSM 4947 10814636 YP_004602607.1 CDS Flexsi_0351 NC_015672.1 372956 373837 R PFAM: Putative capsular polysaccharide synthesis protein; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_2332 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; hypothetical protein complement(372956..373837) Flexistipes sinusarabici DSM 4947 10814637 YP_004602608.1 CDS Flexsi_0352 NC_015672.1 373853 374890 R PFAM: Glycosyl transferases group 1; KEGG: sli:Slin_6401 hypothetical protein; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase complement(373853..374890) Flexistipes sinusarabici DSM 4947 10814638 YP_004602609.1 CDS Flexsi_0353 NC_015672.1 375042 376223 R InterPro IPR000863; KEGG: dae:Dtox_4099 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase; hypothetical protein complement(375042..376223) Flexistipes sinusarabici DSM 4947 10814639 YP_004602610.1 CDS Flexsi_0354 NC_015672.1 376201 377061 R PFAM: Sulfotransferase domain; KEGG: eli:ELI_12210 hypothetical protein; SPTR: Putative uncharacterized protein; sulfotransferase complement(376201..377061) Flexistipes sinusarabici DSM 4947 10814640 YP_004602611.1 CDS Flexsi_0355 NC_015672.1 377087 377800 R COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bse:Bsel_3040 glycosyl transferase family 2 protein; PFAM: Glycosyl transferase, family 2; SPTR: WfaY protein; hypothetical protein complement(377087..377800) Flexistipes sinusarabici DSM 4947 10814641 YP_004602612.1 CDS Flexsi_0356 NC_015672.1 377906 378757 R PFAM: Glycosyl transferase family 2; COGs: COG2327 conserved hypothetical protein; KEGG: pca:Pcar_1801 hypothetical protein; SPTR: Putative uncharacterized protein; family 2 glycosyl transferase complement(377906..378757) Flexistipes sinusarabici DSM 4947 10814642 YP_004602613.1 CDS Flexsi_0357 NC_015672.1 378754 379872 R PFAM: Polysaccharide pyruvyl transferase; InterPro IPR000863; KEGG: syp:SYNPCC7002_A1506 hypothetical protein; PFAM: Sulfotransferase; SPTR: Putative uncharacterized protein; hypothetical protein complement(378754..379872) Flexistipes sinusarabici DSM 4947 10814643 YP_004602614.1 CDS Flexsi_0358 NC_015672.1 379875 380615 R PFAM: Sulfotransferase domain; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dat:HRM2_25290 lipopolysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein; sulfotransferase complement(379875..380615) Flexistipes sinusarabici DSM 4947 10814644 YP_004602615.1 CDS Flexsi_0359 NC_015672.1 380612 381952 R PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein complement(380612..381952) Flexistipes sinusarabici DSM 4947 10814645 YP_004602616.1 CDS Flexsi_0360 NC_015672.1 382312 382440 D InterPro IPR008815; KEGG: fps:FP1126 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; hypothetical protein 382312..382440 Flexistipes sinusarabici DSM 4947 10814646 YP_004602617.1 CDS Flexsi_0361 NC_015672.1 382437 382802 R PFAM: S23 ribosomal protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: saf:SULAZ_0357 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD; S23 ribosomal protein complement(382437..382802) Flexistipes sinusarabici DSM 4947 10814647 YP_004602618.1 CDS Flexsi_0362 NC_015672.1 383216 385069 R PFAM: Polysaccharide biosynthesis protein; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: wsu:WS0037 aminotransferase-like protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: AMINOTRANSFERASE HOMOLOG; polysaccharide biosynthesis protein CapD complement(383216..385069) Flexistipes sinusarabici DSM 4947 10814648 YP_004602619.1 CDS Flexsi_0363 NC_015672.1 385066 386178 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: swp:swp_1585 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Sugar transferase; DegT/DnrJ/EryC1/StrS aminotransferase complement(385066..386178) Flexistipes sinusarabici DSM 4947 10814649 YP_004602620.1 CDS Flexsi_0364 NC_015672.1 386188 386811 R PFAM: Bacterial sugar transferase; InterPro IPR003674; KEGG: cni:Calni_0126 oligosaccharyl transferase STT3 subunit; PFAM: Oligosaccharyl transferase, STT3 subunit; SPTR: Oligosaccharyl transferase STT3 subunit; sugar transferase complement(386188..386811) Flexistipes sinusarabici DSM 4947 10814650 YP_004602621.1 CDS Flexsi_0365 NC_015672.1 386783 388846 R KEGG: sfu:Sfum_0792 hypothetical protein; SPTR: Putative uncharacterized protein; oligosaccharyl transferase STT3 subunit complement(386783..388846) Flexistipes sinusarabici DSM 4947 10814651 YP_004602622.1 CDS Flexsi_0366 NC_015672.1 388931 389773 R PFAM: Sulfotransferase domain; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rma:Rmag_0889 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; hypothetical protein complement(388931..389773) Flexistipes sinusarabici DSM 4947 10814652 YP_004602623.1 CDS Flexsi_0367 NC_015672.1 389770 390519 R PFAM: Glycosyl transferase family 2; InterPro IPR000863; KEGG: ter:Tery_3140 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase; family 2 glycosyl transferase complement(389770..390519) Flexistipes sinusarabici DSM 4947 10814653 YP_004602624.1 CDS Flexsi_0368 NC_015672.1 390516 391493 R PFAM: Sulfotransferase domain; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fph:Fphi_1480 putative teichuronic acid biosynthesis glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: WfdV; sulfotransferase complement(390516..391493) Flexistipes sinusarabici DSM 4947 10814654 YP_004602625.1 CDS Flexsi_0369 NC_015672.1 391493 392296 R PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: saf:SULAZ_1210 glycosyl transferase, family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase family 2; family 2 glycosyl transferase complement(391493..392296) Flexistipes sinusarabici DSM 4947 10814655 YP_004602626.1 CDS Flexsi_0370 NC_015672.1 392293 393492 R PFAM: Glycosyl transferase family 2; SPTR: Putative uncharacterized protein; family 2 glycosyl transferase complement(392293..393492) Flexistipes sinusarabici DSM 4947 10814656 YP_004602627.1 CDS Flexsi_0371 NC_015672.1 393604 394053 R hypothetical protein complement(393604..394053) Flexistipes sinusarabici DSM 4947 10814657 YP_004602628.1 CDS Flexsi_0372 NC_015672.1 394022 394213 R KEGG: dba:Dbac_0822 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(394022..394213) Flexistipes sinusarabici DSM 4947 10814658 YP_004602629.1 CDS Flexsi_0373 NC_015672.1 394405 394860 R PFAM: Domain of unknown function (DUF1814); InterPro IPR000863; KEGG: ter:Tery_3140 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase; hypothetical protein complement(394405..394860) Flexistipes sinusarabici DSM 4947 10814659 YP_004602630.1 CDS Flexsi_0374 NC_015672.1 395268 396236 R PFAM: Sulfotransferase domain; KEGG: syr:SynRCC307_0197 hypothetical protein; SPTR: Putative uncharacterized protein SynRCC307_0197; sulfotransferase complement(395268..396236) Flexistipes sinusarabici DSM 4947 10814660 YP_004602631.1 CDS Flexsi_0375 NC_015672.1 396237 397169 R COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: bfr:BF2582 capsular polysaccharide transporter; PFAM: Polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide repeat unit transporter; hypothetical protein complement(396237..397169) Flexistipes sinusarabici DSM 4947 10814661 YP_004602632.1 CDS Flexsi_0376 NC_015672.1 397183 398634 R PFAM: Polysaccharide biosynthesis protein; KEGG: fjo:Fjoh_0319 hypothetical protein; SPTR: Putative uncharacterized protein; polysaccharide biosynthesis protein complement(397183..398634) Flexistipes sinusarabici DSM 4947 10814662 YP_004602633.1 CDS Flexsi_0377 NC_015672.1 398774 399520 R KEGG: cyc:PCC7424_4383 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(398774..399520) Flexistipes sinusarabici DSM 4947 10814663 YP_004602634.1 CDS Flexsi_0378 NC_015672.1 399522 400574 R KEGG: ava:Ava_2392 putative carbamoylphosphate synthase large subunit short form; SPTR: Putative carbamoylphosphate synthase large subunit short form; hypothetical protein complement(399522..400574) Flexistipes sinusarabici DSM 4947 10814664 YP_004602635.1 CDS Flexsi_0379 NC_015672.1 400577 401866 R COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: DegT/DnrJ/eryc1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; putative carbamoylphosphate synthase large subunit short form complement(400577..401866) Flexistipes sinusarabici DSM 4947 10814665 YP_004602636.1 CDS Flexsi_0380 NC_015672.1 401863 402936 R PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: son:SO_3186 glucose-1-phosphate-thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; DegT/DnrJ/EryC1/StrS aminotransferase complement(401863..402936) Flexistipes sinusarabici DSM 4947 10814666 YP_004602637.1 CDS Flexsi_0381 NC_015672.1 402958 403827 R PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; InterPro IPR008815; KEGG: gem:GM21_0610 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; glucose-1-phosphate thymidylyltransferase complement(402958..403827) Flexistipes sinusarabici DSM 4947 10814667 YP_004602638.1 CDS Flexsi_0382 NC_015672.1 404152 404514 R PFAM: S23 ribosomal protein; S23 ribosomal protein complement(404152..404514) Flexistipes sinusarabici DSM 4947 10814668 YP_004602639.1 CDS Flexsi_0383 NC_015672.1 404561 404761 R KEGG: sdl:Sdel_0830 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(404561..404761) Flexistipes sinusarabici DSM 4947 10814669 YP_004602640.1 CDS Flexsi_0384 NC_015672.1 404869 405603 R KEGG: sdl:Sdel_0829 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(404869..405603) Flexistipes sinusarabici DSM 4947 10814670 YP_004602641.1 CDS Flexsi_0385 NC_015672.1 405600 406064 R hypothetical protein complement(405600..406064) Flexistipes sinusarabici DSM 4947 10814671 YP_004602642.1 CDS Flexsi_0386 NC_015672.1 406188 406343 R InterPro IPR008815; KEGG: fps:FP1126 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(406188..406343) Flexistipes sinusarabici DSM 4947 10814672 YP_004602643.1 CDS Flexsi_0387 NC_015672.1 406322 406681 R PFAM: S23 ribosomal protein; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cni:Calni_1166 gdp-L-fucose synthase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-L-fucose synthase; SPTR: GDP-L-fucose synthase; S23 ribosomal protein complement(406322..406681) Flexistipes sinusarabici DSM 4947 10814673 YP_004602644.1 CDS Flexsi_0388 NC_015672.1 406792 408105 R PFAM: NAD dependent epimerase/dehydratase family; InterPro IPR008815; KEGG: cni:Calni_1165 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; GDP-L-fucose synthase complement(406792..408105) Flexistipes sinusarabici DSM 4947 10814674 YP_004602645.1 CDS Flexsi_0389 NC_015672.1 408139 408501 R PFAM: S23 ribosomal protein; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368:IPR001509; KEGG: gem:GM21_3149 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-mannose 4,6-dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; S23 ribosomal protein complement(408139..408501) Flexistipes sinusarabici DSM 4947 10814675 YP_004602646.1 CDS Flexsi_0390 NC_015672.1 408546 409754 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; InterPro IPR008815; KEGG: sru:SRU_1288 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; GDP-mannose 4,6-dehydratase complement(408546..409754) Flexistipes sinusarabici DSM 4947 10814676 YP_004602647.1 CDS Flexsi_0391 NC_015672.1 410074 410430 R PFAM: S23 ribosomal protein; COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN; InterPro IPR007842; KEGG: sua:Saut_2008 HEPN domain-containing protein; PFAM: HEPN; SMART: HEPN; SPTR: HEPN domain protein; S23 ribosomal protein complement(410074..410430) Flexistipes sinusarabici DSM 4947 10814677 YP_004602648.1 CDS Flexsi_0392 NC_015672.1 410742 411158 R PFAM: HEPN domain; InterPro IPR002934; KEGG: sua:Saut_2009 hypothetical protein; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein; HEPN domain-containing protein complement(410742..411158) Flexistipes sinusarabici DSM 4947 10814678 YP_004602649.1 CDS Flexsi_0393 NC_015672.1 411127 411495 R PFAM: Nucleotidyltransferase domain; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR001509; KEGG: cni:Calni_0166 udp-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; DNA polymerase beta domain-containing protein complement(411127..411495) Flexistipes sinusarabici DSM 4947 10814679 YP_004602650.1 CDS Flexsi_0394 NC_015672.1 411722 412777 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; UDP-glucose 4-epimerase complement(411722..412777) Flexistipes sinusarabici DSM 4947 10814680 YP_004602651.1 CDS Flexsi_0395 NC_015672.1 413183 415018 D PFAM: Transposase DDE domain; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ddf:DEFDS_1468 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Long-chain fatty-acid-CoA ligase; transposase IS4 family protein 413183..415018 Flexistipes sinusarabici DSM 4947 10814681 YP_004602652.1 CDS Flexsi_0396 NC_015672.1 415169 417028 D PFAM: AMP-binding enzyme; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: ddf:DEFDS_1467 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; long-chain-fatty-acid--CoA ligase 415169..417028 Flexistipes sinusarabici DSM 4947 10814682 YP_004602653.1 CDS Flexsi_0397 NC_015672.1 417025 419412 D PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: ddf:DEFDS_1466 3-ketoacyl-CoA thiolase; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: 3-ketoacyl-CoA thiolase; TIGRFAM: Thiolase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 417025..419412 Flexistipes sinusarabici DSM 4947 10814683 YP_004602654.1 CDS Flexsi_0398 NC_015672.1 419429 420607 D PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: ddf:DEFDS_1465 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; acetyl-CoA acetyltransferase 419429..420607 Flexistipes sinusarabici DSM 4947 10814684 YP_004602655.1 CDS Flexsi_0399 NC_015672.1 420924 422699 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG0824 thioesterase; InterPro IPR006684:IPR006683; KEGG: thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; butyryl-CoA dehydrogenase 420924..422699 Flexistipes sinusarabici DSM 4947 10814685 YP_004602656.1 CDS Flexsi_0400 NC_015672.1 422728 423120 R PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: ddf:DEFDS_1839 hypothetical protein; SPTR: Putative uncharacterized protein; 4-hydroxybenzoyl-CoA thioesterase complement(422728..423120) Flexistipes sinusarabici DSM 4947 10814686 YP_004602657.1 CDS Flexsi_0401 NC_015672.1 423139 423705 R PFAM: Chalcone-flavanone isomerase; hypothetical protein complement(423139..423705) Flexistipes sinusarabici DSM 4947 10814687 YP_004602658.1 CDS Flexsi_0402 NC_015672.1 423859 424011 D COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ddf:DEFDS_1835 3-hydroxybutyryl-CoA dehydratase; PFAM: Crotonase, core; PRIAM: 3-hydroxybutyryl-CoA dehydratase; SPTR: 3-hydroxybutyryl-CoA dehydratase; hypothetical protein 423859..424011 Flexistipes sinusarabici DSM 4947 10814688 YP_004602659.1 CDS Flexsi_0403 NC_015672.1 424097 424873 D PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: ddf:DEFDS_1834 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Butyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydratase 424097..424873 Flexistipes sinusarabici DSM 4947 10814689 YP_004602660.1 CDS Flexsi_0404 NC_015672.1 424883 426022 D PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR001450:IPR004017; KEGG: ddf:DEFDS_1833 iron-sulfur cluster-binding protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Iron-sulfur cluster-binding protein; butyryl-CoA dehydrogenase 424883..426022 Flexistipes sinusarabici DSM 4947 10814690 YP_004602661.1 CDS Flexsi_0405 NC_015672.1 426247 428244 D PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: ddf:DEFDS_1832 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, beta subunit; hypothetical protein 426247..428244 Flexistipes sinusarabici DSM 4947 10814691 YP_004602662.1 CDS Flexsi_0406 NC_015672.1 428244 429008 D PFAM: Electron transfer flavoprotein domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: ddf:DEFDS_1831 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha/beta 428244..429008 Flexistipes sinusarabici DSM 4947 10814692 YP_004602663.1 CDS Flexsi_0407 NC_015672.1 429018 429932 D PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: tye:THEYE_A0982 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: 3-hydroxyisobutyrate dehydrogenase; SPTR: 3-hydroxyisobutyrate dehydrogenase; electron transfer flavoprotein subunit alpha 429018..429932 Flexistipes sinusarabici DSM 4947 10814693 YP_004602664.1 CDS Flexsi_0408 NC_015672.1 430187 431044 R PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; KEGG: csh:Closa_3415 protein of unknown function DUF342; SPTR: Putative uncharacterized protein; 3-hydroxyisobutyrate dehydrogenase complement(430187..431044) Flexistipes sinusarabici DSM 4947 10814694 YP_004602665.1 CDS Flexsi_0409 NC_015672.1 431044 431850 R PFAM: Protein of unknown function (DUF342); COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: sku:Sulku_1616 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photo-lyase; hypothetical protein complement(431044..431850) Flexistipes sinusarabici DSM 4947 10814695 YP_004602666.1 CDS Flexsi_0410 NC_015672.1 432004 433386 R PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_1618 Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, Rrf2 family; deoxyribodipyrimidine photo-lyase complement(432004..433386) Flexistipes sinusarabici DSM 4947 10814696 YP_004602667.1 CDS Flexsi_0411 NC_015672.1 433638 434063 D PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: ddf:DEFDS_1619 cytochrome bd oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR: Cytochrome bd oxidase subunit I; BadM/Rrf2 family transcriptional regulator 433638..434063 Flexistipes sinusarabici DSM 4947 10814697 YP_004602668.1 CDS Flexsi_0412 NC_015672.1 434083 435405 D PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: ddf:DEFDS_1620 cytochrome bd oxidase subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: Cytochrome bd oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; cytochrome bd ubiquinol oxidase subunit I 434083..435405 Flexistipes sinusarabici DSM 4947 10814698 YP_004602669.1 CDS Flexsi_0413 NC_015672.1 435429 436466 D PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); KEGG: cni:Calni_0626 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome d ubiquinol oxidase subunit II 435429..436466 Flexistipes sinusarabici DSM 4947 10814699 YP_004602670.1 CDS Flexsi_0414 NC_015672.1 436749 437552 D hypothetical protein 436749..437552 Flexistipes sinusarabici DSM 4947 10814700 YP_004602671.1 CDS Flexsi_0415 NC_015672.1 438104 438328 D hypothetical protein 438104..438328 Flexistipes sinusarabici DSM 4947 10814702 YP_004602672.1 CDS Flexsi_0416 NC_015672.1 438481 438702 D InterPro IPR002941; KEGG: cts:Ctha_1153 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein; hypothetical protein 438481..438702 Flexistipes sinusarabici DSM 4947 10814703 YP_004602673.1 CDS Flexsi_0417 NC_015672.1 438889 440466 D PFAM: DNA methylase; InterPro IPR019045; KEGG: mja:MJ_1449 hypothetical protein; PFAM: Restriction endonuclease, type II, MjaII; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Putative Type II restriction enzyme MjaII (Endonuclease MjaII) (R.MjaII); DNA methylase N-4/N-6 domain-containing protein 438889..440466 Flexistipes sinusarabici DSM 4947 10814704 YP_004602674.1 CDS Flexsi_0418 NC_015672.1 440494 441549 D PFAM: MjaII restriction endonuclease; KEGG: dap:Dacet_2661 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; type II site-specific deoxyribonuclease 440494..441549 Flexistipes sinusarabici DSM 4947 10814705 YP_004602675.1 CDS Flexsi_0419 NC_015672.1 441555 441770 R InterPro IPR006675:IPR006674:IPR003607; KEGG: dak:DaAHT2_1884 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase; TIGRFAM: HDIG; hypothetical protein complement(441555..441770) Flexistipes sinusarabici DSM 4947 10814706 YP_004602676.1 CDS Flexsi_0420 NC_015672.1 441876 442826 D PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 441876..442826 Flexistipes sinusarabici DSM 4947 10814707 YP_004602677.1 CDS Flexsi_0421 NC_015672.1 443062 443787 D KEGG: cch:Cag_0599 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 443062..443787 Flexistipes sinusarabici DSM 4947 10814708 YP_004602678.1 CDS Flexsi_0422 NC_015672.1 443852 444700 D KEGG: pna:Pnap_4357 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 443852..444700 Flexistipes sinusarabici DSM 4947 10814709 YP_004602679.1 CDS Flexsi_0423 NC_015672.1 444846 445475 D KEGG: sat:SYN_00500 metallo-beta-lactamase superfamily hydrolase; SPTR: Hydrolase of the metallo-beta-lactamase superfamily; hypothetical protein 444846..445475 Flexistipes sinusarabici DSM 4947 10814710 YP_004602680.1 CDS Flexsi_0424 NC_015672.1 445499 446524 D KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; metallo-beta-lactamase superfamily hydrolase 445499..446524 Flexistipes sinusarabici DSM 4947 10814711 YP_004602681.1 CDS Flexsi_0425 NC_015672.1 446609 447229 D KEGG: hch:HCH_05638 restriction endonuclease; SPTR: Predicted restriction endonuclease; hypothetical protein 446609..447229 Flexistipes sinusarabici DSM 4947 10814712 YP_004602682.1 CDS Flexsi_0426 NC_015672.1 447325 448038 D KEGG: ddf:DEFDS_0872 hypothetical protein; SPTR: Putative uncharacterized protein; restriction endonuclease 447325..448038 Flexistipes sinusarabici DSM 4947 10814713 YP_004602683.1 CDS Flexsi_0427 NC_015672.1 448634 449644 D KEGG: ddf:DEFDS_0871 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 448634..449644 Flexistipes sinusarabici DSM 4947 10814714 YP_004602684.1 CDS Flexsi_0428 NC_015672.1 449646 450056 D hypothetical protein 449646..450056 Flexistipes sinusarabici DSM 4947 10814715 YP_004602685.1 CDS Flexsi_0429 NC_015672.1 450248 450634 D COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: dat:HRM2_17930 hypothetical protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; hypothetical protein 450248..450634 Flexistipes sinusarabici DSM 4947 10814716 YP_004602686.1 CDS Flexsi_0430 NC_015672.1 450643 451800 R PFAM: Phage integrase family; COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR014145:IPR002755; KEGG: mpd:MCP_2125 hypothetical protein; PFAM: DNA primase, small subunit; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase LigD, polymerase domain; integrase family protein complement(450643..451800) Flexistipes sinusarabici DSM 4947 10814717 YP_004602687.1 CDS Flexsi_0431 NC_015672.1 452503 453378 D TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterPro IPR012319:IPR015886; KEGG: gfo:GFO_3213 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; PRIAM: DNA-formamidopyrimidine glycosylase; SPTR: Formamidopyrimidine-DNA glycosylase; DNA polymerase LigD, polymerase domain-containing protein 452503..453378 Flexistipes sinusarabici DSM 4947 10814718 YP_004602688.1 CDS Flexsi_0432 NC_015672.1 453380 454177 D PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027; KEGG: cni:Calni_1870 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; DNA-formamidopyrimidine glycosylase 453380..454177 Flexistipes sinusarabici DSM 4947 10814719 YP_004602689.1 CDS Flexsi_0433 NC_015672.1 454736 456682 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR019574:IPR001450:IPR006656; KEGG: ddf:DEFDS_1612 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molybdopterin oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; glutamate synthase 454736..456682 Flexistipes sinusarabici DSM 4947 10814720 YP_004602690.1 CDS Flexsi_0434 NC_015672.1 456697 458922 D PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; InterPro IPR002559; KEGG: dal:Dalk_1317 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Isrso9-transposase protein; NADH dehydrogenase (quinone) 456697..458922 Flexistipes sinusarabici DSM 4947 10814721 YP_004602691.1 CDS Flexsi_0435 NC_015672.1 459087 459866 R KEGG: glo:Glov_3666 transposase IS4 family protein; SPTR: Transposase IS4 family protein; transposase IS4 family protein complement(459087..459866) Flexistipes sinusarabici DSM 4947 10814722 YP_004602692.1 CDS Flexsi_0436 NC_015672.1 459902 460453 R PFAM: Transposase domain (DUF772); COGs: COG1001 Adenine deaminase; HAMAP: Adenine deaminase; InterPro IPR006679:IPR006680; KEGG: adenine deaminase; PFAM: Amidohydrolase 1; PRIAM: Adenine deaminase; SPTR: Adenine deaminase; TIGRFAM: Adenine deaminase; transposase IS4 family protein complement(459902..460453) Flexistipes sinusarabici DSM 4947 10814723 YP_004602693.1 CDS Flexsi_0437 NC_015672.1 460608 462227 R PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; COGs: COG2252 Permease; InterPro IPR006043; KEGG: shl:Shal_3171 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Probable transporter; adenine deaminase complement(460608..462227) Flexistipes sinusarabici DSM 4947 10814724 YP_004602694.1 CDS Flexsi_0438 NC_015672.1 462231 463529 R PFAM: Permease family; xanthine/uracil/vitamin C permease complement(462231..463529) Flexistipes sinusarabici DSM 4947 10814725 YP_004602695.1 CDS Flexsi_0439 NC_015672.1 464369 464785 R COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: sfu:Sfum_2600 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS116/IS110/IS902; SPTR: Transposase IS116/IS110/IS902; hypothetical protein complement(464369..464785) Flexistipes sinusarabici DSM 4947 10814726 YP_004602696.1 CDS Flexsi_0440 NC_015672.1 465051 466073 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; InterPro IPR019641; KEGG: nla:NLA_12350 hypothetical protein; PFAM: Protein of unknown function DUF2506; SPTR: Putative uncharacterized protein; transposase IS116/IS110/IS902 family protein 465051..466073 Flexistipes sinusarabici DSM 4947 10814727 YP_004602697.1 CDS Flexsi_0441 NC_015672.1 466645 467013 R PFAM: Protein of unknown function (DUF2628); manually curated; hypothetical protein complement(466645..467013) Flexistipes sinusarabici DSM 4947 10814728 YP_004602698.1 CDS Flexsi_0443 NC_015672.1 467558 467791 R InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein complement(467558..467791) Flexistipes sinusarabici DSM 4947 10814730 YP_004602699.1 CDS Flexsi_0444 NC_015672.1 468078 469397 R PFAM: Transposase DDE domain; COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320:IPR020046:IPR020047:IPR001098:IPR 002421:IPR008918; KEGG: cni:Calni_1275 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; DNA-directed DNA polymerase, family A, palm domain; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; transposase IS4 family protein complement(468078..469397) Flexistipes sinusarabici DSM 4947 10814731 YP_004602700.1 CDS Flexsi_0445 NC_015672.1 470175 472556 D PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_1966 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; DNA polymerase I 470175..472556 Flexistipes sinusarabici DSM 4947 10814732 YP_004602701.1 CDS Flexsi_0446 NC_015672.1 472587 473627 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: ddf:DEFDS_1965 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; diguanylate cyclase 472587..473627 Flexistipes sinusarabici DSM 4947 10814733 YP_004602702.1 CDS Flexsi_0447 NC_015672.1 473646 474911 D PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; InterPro IPR008258:IPR018392:IPR002482; KEGG: ddf:DEFDS_1862 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SPTR: Lytic transglycosylase, catalytic; histidinol dehydrogenase 473646..474911 Flexistipes sinusarabici DSM 4947 10814734 YP_004602703.1 CDS Flexsi_0448 NC_015672.1 474986 476599 D PFAM: Transglycosylase SLT domain; LysM domain; lytic transglycosylase catalytic subunit 474986..476599 Flexistipes sinusarabici DSM 4947 10814735 YP_004602704.1 CDS Flexsi_0449 NC_015672.1 477125 478315 D PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: ddf:DEFDS_1786 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; translation elongation factor Tu 477125..478315 Flexistipes sinusarabici DSM 4947 10814740 YP_004602705.1 CDS Flexsi_0450 NC_015672.1 478322 478471 D PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 478322..478471 Flexistipes sinusarabici DSM 4947 10814741 YP_004602706.1 CDS Flexsi_0451 NC_015672.1 478582 478764 D PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; COGs: COG0250 Transcription antiterminator; InterPro IPR001062:IPR006645:IPR005824; KEGG: dap:Dacet_0360 NusG antitermination factor; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG; preprotein translocase subunit SecE 478582..478764 Flexistipes sinusarabici DSM 4947 10814743 YP_004602707.1 CDS Flexsi_0452 NC_015672.1 478769 479293 D PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0080 Ribosomal protein L11; InterPro IPR006519:IPR020784:IPR020783:IPR000911; KEGG: cni:Calni_1532 LSU ribosomal protein l11p; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; NusG antitermination factor 478769..479293 Flexistipes sinusarabici DSM 4947 10814744 YP_004602708.1 CDS Flexsi_0453 NC_015672.1 479312 479737 D PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: cni:Calni_1531 LSU ribosomal protein l1p; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; 50S ribosomal protein L11 479312..479737 Flexistipes sinusarabici DSM 4947 10814745 YP_004602709.1 CDS Flexsi_0454 NC_015672.1 479753 480460 D PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; COGs: COG0244 Ribosomal protein L10; HAMAP: 50S ribosomal protein L10; InterPro IPR001790; KEGG: ddf:DEFDS_1781 50S ribosomal protein L10; PFAM: Ribosomal protein L10; SPTR: 50S ribosomal protein L10; 50S ribosomal protein L1 479753..480460 Flexistipes sinusarabici DSM 4947 10814746 YP_004602710.1 CDS Flexsi_0455 NC_015672.1 480557 481078 D PFAM: Ribosomal protein L10; COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: ddf:DEFDS_1780 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; 50S ribosomal protein L10 480557..481078 Flexistipes sinusarabici DSM 4947 10814747 YP_004602711.1 CDS Flexsi_0456 NC_015672.1 481096 481479 D PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: ddf:DEFDS_1779 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; 50S ribosomal protein L7/L12 481096..481479 Flexistipes sinusarabici DSM 4947 10814748 YP_004602712.1 CDS Flexsi_0457 NC_015672.1 481577 485548 D PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta'; InterProIPR012754:IPR007080:IPR000722:IPR007066:IPR 007083:IPR007081:IPR006592; KEGG: ddf:DEFDS_1778 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; DNA-directed RNA polymerase subunit beta 481577..485548 Flexistipes sinusarabici DSM 4947 10814749 YP_004602713.1 CDS Flexsi_0458 NC_015672.1 485560 489618 D PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; COGs: COG0048 Ribosomal protein S12; InterPro IPR005679:IPR006032; KEGG: ddf:DEFDS_1777 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; DNA-directed RNA polymerase subunit beta' 485560..489618 Flexistipes sinusarabici DSM 4947 10814750 YP_004602714.1 CDS Flexsi_0459 NC_015672.1 489829 490200 D PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; COGs: COG0049 Ribosomal protein S7; InterPro IPR005717:IPR000235; KEGG: ddf:DEFDS_1776 30S ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; 30S ribosomal protein S12 489829..490200 Flexistipes sinusarabici DSM 4947 10814751 YP_004602715.1 CDS Flexsi_0460 NC_015672.1 490213 490683 D PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640; KEGG: ddf:DEFDS_1775 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G 2; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; 30S ribosomal protein S7 490213..490683 Flexistipes sinusarabici DSM 4947 10814752 YP_004602716.1 CDS Flexsi_0461 NC_015672.1 490696 492771 D PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0050 GTPase - translation elongation factors; InterProIPR004160:IPR004541:IPR005225:IPR004161:IPR 000795; KEGG: ddf:DEFDS_1787 translation elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; translation elongation factor G 490696..492771 Flexistipes sinusarabici DSM 4947 10814753 YP_004602717.1 CDS Flexsi_0462 NC_015672.1 492787 493977 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; COGs: COG0051 Ribosomal protein S10; HAMAP: 30S ribosomal protein S10; InterPro IPR005731:IPR001848; KEGG: dap:Dacet_0371 30S ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10, bacterial; translation elongation factor Tu 492787..493977 Flexistipes sinusarabici DSM 4947 10814754 YP_004602718.1 CDS Flexsi_0463 NC_015672.1 493990 494298 D PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; COGs: COG0087 Ribosomal protein L3; InterPro IPR019927:IPR000597; KEGG: ddf:DEFDS_1772 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; 30S ribosomal protein S10 493990..494298 Flexistipes sinusarabici DSM 4947 10814755 YP_004602719.1 CDS Flexsi_0464 NC_015672.1 494314 494958 D PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: ddf:DEFDS_1771 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; 50S ribosomal protein L3 494314..494958 Flexistipes sinusarabici DSM 4947 10814756 YP_004602720.1 CDS Flexsi_0465 NC_015672.1 494967 495593 D PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: cni:Calni_1505 LSU ribosomal protein l23p; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; 50S ribosomal protein L4 494967..495593 Flexistipes sinusarabici DSM 4947 10814757 YP_004602721.1 CDS Flexsi_0466 NC_015672.1 495590 495871 D PFAM: Ribosomal protein L23; COGs: COG0090 Ribosomal protein L2; InterPro IPR005880:IPR002171; KEGG: ddf:DEFDS_1769 50S ribosomal protein L2; PFAM: Ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; 50S ribosomal protein L25 495590..495871 Flexistipes sinusarabici DSM 4947 10814758 YP_004602722.1 CDS Flexsi_0467 NC_015672.1 495884 496708 D PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: dap:Dacet_0376 30S ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; 50S ribosomal protein L2 495884..496708 Flexistipes sinusarabici DSM 4947 10814759 YP_004602723.1 CDS Flexsi_0468 NC_015672.1 496720 496998 D PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR001063; KEGG: ddf:DEFDS_1767 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; 30S ribosomal protein S19 496720..496998 Flexistipes sinusarabici DSM 4947 10814760 YP_004602724.1 CDS Flexsi_0469 NC_015672.1 497010 497342 D PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; COGs: COG0092 Ribosomal protein S3; InterProIPR005704:IPR008282:IPR004044:IPR001351:IPR 004087; KEGG: ddf:DEFDS_1766 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; 50S ribosomal protein L22 497010..497342 Flexistipes sinusarabici DSM 4947 10814761 YP_004602725.1 CDS Flexsi_0470 NC_015672.1 497356 498015 D PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114:IPR016180; KEGG: ddf:DEFDS_1765 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; 30S ribosomal protein S3 497356..498015 Flexistipes sinusarabici DSM 4947 10814762 YP_004602726.1 CDS Flexsi_0471 NC_015672.1 498018 498446 D PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; InterPro IPR001854; KEGG: cni:Calni_1499 ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: Ribosomal protein L29; 50S ribosomal protein L16 498018..498446 Flexistipes sinusarabici DSM 4947 10814763 YP_004602727.1 CDS Flexsi_0472 NC_015672.1 498443 498637 D PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; COGs: COG0186 Ribosomal protein S17; InterPro IPR019984:IPR000266; KEGG: dap:Dacet_0381 30S 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; 50S ribosomal protein L29 498443..498637 Flexistipes sinusarabici DSM 4947 10814764 YP_004602728.1 CDS Flexsi_0473 NC_015672.1 498639 498914 D PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR000218; KEGG: cni:Calni_1497 LSU ribosomal protein l14p; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; 30S ribosomal protein S17 498639..498914 Flexistipes sinusarabici DSM 4947 10814765 YP_004602729.1 CDS Flexsi_0474 NC_015672.1 498934 499302 D PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; COGs: COG0198 Ribosomal protein L24; InterPro IPR003256; KEGG: ddf:DEFDS_1761 50S ribosomal protein L24; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; 50S ribosomal protein L14 498934..499302 Flexistipes sinusarabici DSM 4947 10814766 YP_004602730.1 CDS Flexsi_0475 NC_015672.1 499312 499644 D TIGRFAM: ribosomal protein L24, bacterial/organelle; COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: ddf:DEFDS_1760 50S ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; 50S ribosomal protein L24 499312..499644 Flexistipes sinusarabici DSM 4947 10814767 YP_004602731.1 CDS Flexsi_0476 NC_015672.1 499659 500201 D PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; COGs: COG0199 Ribosomal protein S14; InterPro IPR001209; KEGG: ddf:DEFDS_1759 30S ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14 type Z; 50S ribosomal protein L5 499659..500201 Flexistipes sinusarabici DSM 4947 10814768 YP_004602732.1 CDS Flexsi_0477 NC_015672.1 500211 500396 D PFAM: Ribosomal protein S14p/S29e; COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: ddf:DEFDS_1758 30S ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; 30S ribosomal protein S14 500211..500396 Flexistipes sinusarabici DSM 4947 10814769 YP_004602733.1 CDS Flexsi_0478 NC_015672.1 500438 500836 D PFAM: Ribosomal protein S8; COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906:IPR020040; KEGG: ddf:DEFDS_1757 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; 30S ribosomal protein S8 500438..500836 Flexistipes sinusarabici DSM 4947 10814770 YP_004602734.1 CDS Flexsi_0479 NC_015672.1 500851 501387 D PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: ddf:DEFDS_1756 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; 50S ribosomal protein L6 500851..501387 Flexistipes sinusarabici DSM 4947 10814771 YP_004602735.1 CDS Flexsi_0480 NC_015672.1 501399 501752 D PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; COGs: COG0098 Ribosomal protein S5; InterPro IPR005712:IPR013810:IPR005324; KEGG: ddf:DEFDS_1755 30S ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; 50S ribosomal protein L18 501399..501752 Flexistipes sinusarabici DSM 4947 10814772 YP_004602736.1 CDS Flexsi_0481 NC_015672.1 501767 502255 D PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; COGs: COG0200 Ribosomal protein L15; InterPro IPR005749:IPR001196; KEGG: dap:Dacet_0390 50S ribosomal protein L15; PFAM: Ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; 30S ribosomal protein S5 501767..502255 Flexistipes sinusarabici DSM 4947 10814773 YP_004602737.1 CDS Flexsi_0482 NC_015672.1 502268 502708 D PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: ddf:DEFDS_1753 preprotein translocase subunit Y; PFAM: SecY protein; SPTR: Preprotein translocase subunit Y; TIGRFAM: SecY protein; 50S ribosomal protein L15 502268..502708 Flexistipes sinusarabici DSM 4947 10814774 YP_004602738.1 CDS Flexsi_0483 NC_015672.1 502771 504087 D PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; COGs: COG0563 Adenylate kinase and related kinase; HAMAP: Adenylate kinase; InterPro IPR006259:IPR000850:IPR007862; KEGG: ddf:DEFDS_1752 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; preprotein translocase subunit SecY 502771..504087 Flexistipes sinusarabici DSM 4947 10814775 YP_004602739.1 CDS Flexsi_0484 NC_015672.1 504084 504731 D PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467:IPR000994; KEGG: ddf:DEFDS_1751 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; adenylate kinase 504084..504731 Flexistipes sinusarabici DSM 4947 10814776 YP_004602740.1 CDS Flexsi_0485 NC_015672.1 504735 505478 D PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR004368:IPR006196; KEGG: has:Halsa_1899 translation initiation factor IF-1; PFAM: S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; type I methionine aminopeptidase 504735..505478 Flexistipes sinusarabici DSM 4947 10814777 YP_004602741.1 CDS Flexsi_0486 NC_015672.1 505488 505706 D PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: ddf:DEFDS_1749 50S ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; translation initiation factor IF-1 505488..505706 Flexistipes sinusarabici DSM 4947 10814778 YP_004602742.1 CDS Flexsi_0487 NC_015672.1 505721 505834 D PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; COGs: COG0099 Ribosomal protein S13; InterPro IPR019980:IPR001892; KEGG: ddf:DEFDS_1748 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; 50S ribosomal protein L36 505721..505834 Flexistipes sinusarabici DSM 4947 10814779 YP_004602743.1 CDS Flexsi_0488 NC_015672.1 505846 506214 D PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; COGs: COG0100 Ribosomal protein S11; InterPro IPR019981:IPR001971; KEGG: ddf:DEFDS_1747 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; 30S ribosomal protein S13 505846..506214 Flexistipes sinusarabici DSM 4947 10814780 YP_004602744.1 CDS Flexsi_0489 NC_015672.1 506238 506618 D PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR005709:IPR001912:IPR002942; KEGG: ddf:DEFDS_1746 30S ribosomal protein S4; PFAM: Ribosomal protein S4; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; 30S ribosomal protein S11 506238..506618 Flexistipes sinusarabici DSM 4947 10814781 YP_004602745.1 CDS Flexsi_0490 NC_015672.1 506634 507260 D PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773:IPR011261:IPR011262:IPR011260:IPR 011263; KEGG: dap:Dacet_0399 DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; 30S ribosomal protein S4 506634..507260 Flexistipes sinusarabici DSM 4947 10814782 YP_004602746.1 CDS Flexsi_0491 NC_015672.1 507293 508300 D PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; COGs: COG0203 Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; InterPro IPR000456; KEGG: ddf:DEFDS_1744 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; DNA-directed RNA polymerase subunit alpha 507293..508300 Flexistipes sinusarabici DSM 4947 10814783 YP_004602747.1 CDS Flexsi_0492 NC_015672.1 508301 508711 D PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1743 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; 50S ribosomal protein L17 508301..508711 Flexistipes sinusarabici DSM 4947 10814784 YP_004602748.1 CDS Flexsi_0493 NC_015672.1 508718 509305 D PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1742 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter-like protein 508718..509305 Flexistipes sinusarabici DSM 4947 10814785 YP_004602749.1 CDS Flexsi_0494 NC_015672.1 509313 509879 D PFAM: ABC transporter; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: cni:Calni_1478 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Class II aldolase/adducin family protein; ABC transporter-like protein 509313..509879 Flexistipes sinusarabici DSM 4947 10814786 YP_004602750.1 CDS Flexsi_0495 NC_015672.1 509889 510443 D PFAM: Class II Aldolase and Adducin N-terminal domain; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: cni:Calni_1476 abc transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; class II aldolase/adducin family protein 509889..510443 Flexistipes sinusarabici DSM 4947 10814787 YP_004602751.1 CDS Flexsi_0496 NC_015672.1 510447 512276 D PFAM: ABC transporter; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; InterPro IPR004639:IPR005814; KEGG: ddf:DEFDS_1739 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; ABC transporter-like protein 510447..512276 Flexistipes sinusarabici DSM 4947 10814788 YP_004602752.1 CDS Flexsi_0497 NC_015672.1 512273 513538 D PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; KEGG: ddf:DEFDS_1738 hypothetical protein; SPTR: Putative uncharacterized protein; glutamate-1-semialdehyde 2,1-aminomutase 512273..513538 Flexistipes sinusarabici DSM 4947 10814789 YP_004602753.1 CDS Flexsi_0498 NC_015672.1 513548 513877 D KEGG: ddf:DEFDS_1737 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 513548..513877 Flexistipes sinusarabici DSM 4947 10814790 YP_004602754.1 CDS Flexsi_0499 NC_015672.1 513897 514145 D PFAM: Putative F0F1-ATPase subunit (ATPase_gene1); InterPro IPR008413; KEGG: cni:Calni_1473 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 513897..514145 Flexistipes sinusarabici DSM 4947 10814791 YP_004602755.1 CDS Flexsi_0500 NC_015672.1 514114 514497 D PFAM: ATP synthase I chain; COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATP synthase subunit a; InterPro IPR000568; KEGG: ddf:DEFDS_1735 F0F1-type ATP synthase A subunit; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A; hypothetical protein 514114..514497 Flexistipes sinusarabici DSM 4947 10814792 YP_004602756.1 CDS Flexsi_0501 NC_015672.1 514481 515152 D PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); HAMAP: ATPase, F0 complex, subunit C; InterPro IPR000454:IPR005953:IPR002379; KEGG: cni:Calni_1471 ATP synthase f0 subcomplex C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: ATP synthase F0 subcomplex C subunit; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; ATP synthase subunit a 514481..515152 Flexistipes sinusarabici DSM 4947 10814793 YP_004602757.1 CDS Flexsi_0502 NC_015672.1 515180 515497 D PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; KEGG: ddf:DEFDS_1733 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; ATP synthase subunit c 515180..515497 Flexistipes sinusarabici DSM 4947 10814794 YP_004602758.1 CDS Flexsi_0503 NC_015672.1 515546 517084 D PFAM: NapC/NirT cytochrome c family, N-terminal region; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: dap:Dacet_0423 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein; multiheme C-type cytochrome 515546..517084 Flexistipes sinusarabici DSM 4947 10814795 YP_004602759.1 CDS Flexsi_0504 NC_015672.1 517172 517846 D PFAM: Rhomboid family; COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: ddf:DEFDS_1732 hydrogenase expression/formation protein HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; SPTR: Hydrogenase expression/formation protein HupF/HypC; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; rhomboid family protein 517172..517846 Flexistipes sinusarabici DSM 4947 10814796 YP_004602760.1 CDS Flexsi_0505 NC_015672.1 517850 518077 D PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: dap:Dacet_0421 hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; SPTR: Hydrogenase formation HypD protein; TIGRFAM: Hydrogenase formation HypD protein; hydrogenase assembly chaperone HypC/HupF 517850..518077 Flexistipes sinusarabici DSM 4947 10814797 YP_004602761.1 CDS Flexsi_0506 NC_015672.1 518061 519146 D PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR011854:IPR000728:IPR010918; KEGG: cni:Calni_1467 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypD 518061..519146 Flexistipes sinusarabici DSM 4947 10814798 YP_004602762.1 CDS Flexsi_0507 NC_015672.1 519174 520166 D PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; KEGG: cni:Calni_1466 hypothetical protein; SPTR: Putative uncharacterized protein; hydrogenase expression/formation protein HypE 519174..520166 Flexistipes sinusarabici DSM 4947 10814799 YP_004602763.1 CDS Flexsi_0508 NC_015672.1 520123 520383 D PFAM: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: ddf:DEFDS_1729 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; hypothetical protein 520123..520383 Flexistipes sinusarabici DSM 4947 10814800 YP_004602764.1 CDS Flexsi_0509 NC_015672.1 520449 520760 D PFAM: Phosphoribosyl-AMP cyclohydrolase; COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: ddf:DEFDS_1728 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: Type IV pilus assembly protein PilM; phosphoribosyl-AMP cyclohydrolase 520449..520760 Flexistipes sinusarabici DSM 4947 10814801 YP_004602765.1 CDS Flexsi_0510 NC_015672.1 520769 521809 D PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: ddf:DEFDS_1727 hypothetical protein; PFAM: Fimbrial assembly; SPTR: Putative uncharacterized protein; type IV pilus assembly protein PilM 520769..521809 Flexistipes sinusarabici DSM 4947 10814802 YP_004602766.1 CDS Flexsi_0511 NC_015672.1 521806 522351 D PFAM: Fimbrial assembly protein (PilN); KEGG: ddf:DEFDS_1726 hypothetical protein; SPTR: Putative uncharacterized protein; fimbrial assembly family protein 521806..522351 Flexistipes sinusarabici DSM 4947 10814803 YP_004602767.1 CDS Flexsi_0512 NC_015672.1 522354 522923 D PFAM: Pilus assembly protein, PilO; KEGG: cni:Calni_1461 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 522354..522923 Flexistipes sinusarabici DSM 4947 10814804 YP_004602768.1 CDS Flexsi_0513 NC_015672.1 522923 523513 D PFAM: Pilus assembly protein, PilP; COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR013355:IPR005644:IPR004846; KEGG: ddf:DEFDS_1724 hypothetical protein; PFAM: Type II/III secretion system; NolW-like; SPTR: Putative uncharacterized protein; TIGRFAM: Type IV pilus secretin PilQ; hypothetical protein 522923..523513 Flexistipes sinusarabici DSM 4947 10814805 YP_004602769.1 CDS Flexsi_0514 NC_015672.1 523510 525978 D PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus secretin PilQ 523510..525978 Flexistipes sinusarabici DSM 4947 10814806 YP_004602770.1 CDS Flexsi_0515 NC_015672.1 525999 526589 D COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: ddf:DEFDS_1723 lipid A disaccharide synthetase; PFAM: Glycosyl transferase, family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid A disaccharide synthetase; TIGRFAM: Glycosyl transferase, family 19; hypothetical protein 525999..526589 Flexistipes sinusarabici DSM 4947 10814807 YP_004602771.1 CDS Flexsi_0516 NC_015672.1 526590 527690 D PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: hch:HCH_00126 short-chain alcohol dehydrogenase-like protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain alcohol dehydrogenase-like protein; lipid-A-disaccharide synthase 526590..527690 Flexistipes sinusarabici DSM 4947 10814808 YP_004602772.1 CDS Flexsi_0517 NC_015672.1 528006 528797 D PFAM: short chain dehydrogenase; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: ddf:DEFDS_1236 hypothetical protein; PFAM: Uncharacterised protein family UPF0027; SPTR: Putative uncharacterized protein; 3-oxoacyl-(acyl-carrier-protein) reductase 528006..528797 Flexistipes sinusarabici DSM 4947 10814809 YP_004602773.1 CDS Flexsi_0518 NC_015672.1 528825 530261 D PFAM: Uncharacterized protein family UPF0027; KEGG: cni:Calni_2043 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 528825..530261 Flexistipes sinusarabici DSM 4947 10814810 YP_004602774.1 CDS Flexsi_0519 NC_015672.1 530264 530563 D COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: cni:Calni_2042 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; SPTR: 2-hydroxyglutaryl-CoA dehydratase D-component; hypothetical protein 530264..530563 Flexistipes sinusarabici DSM 4947 10814811 YP_004602775.1 CDS Flexsi_0520 NC_015672.1 530560 531549 D PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: cni:Calni_2041 CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; SPTR: CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; 2-hydroxyglutaryl-CoA dehydratase subunit D 530560..531549 Flexistipes sinusarabici DSM 4947 10814812 YP_004602776.1 CDS Flexsi_0521 NC_015672.1 531546 532289 D PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; COGs: COG2033 Desulfoferrodoxin; InterPro IPR002742; KEGG: cni:Calni_1945 superoxide reductase; PFAM: Desulfoferrodoxin, ferrous iron-binding region; PRIAM: Superoxide reductase; SPTR: Superoxide reductase; TIGRFAM: Desulfoferrodoxin, ferrous iron-binding region; CoA-substrate-specific enzyme activase 531546..532289 Flexistipes sinusarabici DSM 4947 10814813 YP_004602777.1 CDS Flexsi_0522 NC_015672.1 532321 532710 R PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin ferrous iron-binding domain; manually curated; desulfoferrodoxin ferrous iron-binding region complement(532321..532710) Flexistipes sinusarabici DSM 4947 10814814 YP_004602778.1 CDS Flexsi_0524 NC_015672.1 534225 534914 R PFAM: Protein of unknown function (DUF554); COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ddf:DEFDS_1842 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/transphosphatidylase; hypothetical protein complement(534225..534914) Flexistipes sinusarabici DSM 4947 10814816 YP_004602779.1 CDS Flexsi_0525 NC_015672.1 534911 535486 R PFAM: Polyphosphate kinase; Phospholipase D Active site motif; COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR019987:IPR005225:IPR002917; KEGG: dap:Dacet_0301 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related; SPTR: Ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; Small GTP-binding protein; phospholipase D/transphosphatidylase complement(534911..535486) Flexistipes sinusarabici DSM 4947 10814817 YP_004602780.1 CDS Flexsi_0526 NC_015672.1 535483 536076 R PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: cni:Calni_0881 phosphoesterase DHHA1; PFAM: Phosphoesterase, DHHA1; SPTR: Phosphoesterase DHHA1; GTP-binding protein engB complement(535483..536076) Flexistipes sinusarabici DSM 4947 10814818 YP_004602781.1 CDS Flexsi_0527 NC_015672.1 536073 536918 R PFAM: DHH family; DHHA1 domain; This gene is disrupted by insertion of repetitive element; manually curated; phosphoesterase DHHA1 complement(536073..536918) Flexistipes sinusarabici DSM 4947 10814819 YP_004602782.1 CDS Flexsi_0530 NC_015672.1 540094 541503 D PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: pmx:PERMA_0591 hypothetical protein; PFAM: Cation/H+ exchanger; SPTR: Putative uncharacterized protein; TrkA-C domain-containing protein 540094..541503 Flexistipes sinusarabici DSM 4947 10814822 YP_004602783.1 CDS Flexsi_0531 NC_015672.1 541496 542659 D PFAM: Sodium/hydrogen exchanger family; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: cni:Calni_0564 propionyl-CoA carboxylase carboxyltransferase subunit; PFAM: Carboxyl transferase; PRIAM: Propionyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase carboxyltransferase subunit; sodium/hydrogen exchanger 541496..542659 Flexistipes sinusarabici DSM 4947 10814823 YP_004602784.1 CDS Flexsi_0532 NC_015672.1 542952 544496 D PFAM: Carboxyl transferase domain; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481:IPR005479:IPR005482; KEGG: cni:Calni_0565 biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SPTR: Biotin carboxylase; propionyl-CoA carboxylase 542952..544496 Flexistipes sinusarabici DSM 4947 10814824 YP_004602785.1 CDS Flexsi_0533 NC_015672.1 544508 546025 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: ddf:DEFDS_1226 biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Biotin carboxyl carrier protein; pyruvate carboxylase 544508..546025 Flexistipes sinusarabici DSM 4947 10814825 YP_004602786.1 CDS Flexsi_0534 NC_015672.1 546038 546571 D PFAM: Biotin-requiring enzyme; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098:IPR006159:IPR006099:IPR006158; KEGG: cni:Calni_0567 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; biotin/lipoyl attachment domain-containing protein 546038..546571 Flexistipes sinusarabici DSM 4947 10814826 YP_004602787.1 CDS Flexsi_0535 NC_015672.1 546647 548791 D PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: dap:Dacet_1929 LAO/AO transport system ATPase; PFAM: ArgK protein; SPTR: LAO/AO transport system ATPase; TIGRFAM: ArgK protein; methylmalonyl-CoA mutase large subunit 546647..548791 Flexistipes sinusarabici DSM 4947 10814827 YP_004602788.1 CDS Flexsi_0536 NC_015672.1 548797 549774 D PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: cni:Calni_0067 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase; LAO/AO transport system ATPase 548797..549774 Flexistipes sinusarabici DSM 4947 10814828 YP_004602789.1 CDS Flexsi_0537 NC_015672.1 550025 550459 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro IPR003658:IPR002645; KEGG: cni:Calni_0188 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; putative anti-sigma regulatory factor complement(550025..550459) Flexistipes sinusarabici DSM 4947 10814829 YP_004602790.1 CDS Flexsi_0538 NC_015672.1 550459 550788 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR000644:IPR004097; KEGG: cni:Calni_0065 inorganic diphosphatase; PFAM: Cystathionine beta-synthase, core; DHHA2; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; anti-anti-sigma factor complement(550459..550788) Flexistipes sinusarabici DSM 4947 10814830 YP_004602791.1 CDS Flexsi_0539 NC_015672.1 551279 552922 D PFAM: DHH family; DRTGG domain; DHHA2 domain; CBS domain; COGs: COG0196 FAD synthase; InterPro IPR002606:IPR015864:IPR015865; KEGG: ddf:DEFDS_1953 riboflavin biosynthesis regulatory protein RibF; PFAM: FAD synthetase; Riboflavin kinase; PRIAM: FAD synthetase., Riboflavin kinase; SPTR: Riboflavin biosynthesis regulatory protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase; inorganic diphosphatase 551279..552922 Flexistipes sinusarabici DSM 4947 10814831 YP_004602792.1 CDS Flexsi_0540 NC_015672.1 552962 553888 D PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR005840:IPR005839:IPR013848:IPR007197:IPR 006638; KEGG: cni:Calni_0476 SSU ribosomal protein s12p methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: SSU ribosomal protein S12P methylthiotransferase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; riboflavin biosynthesis protein RibF 552962..553888 Flexistipes sinusarabici DSM 4947 10814832 YP_004602793.1 CDS Flexsi_0541 NC_015672.1 553885 555189 D PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689:IPR019734; KEGG: cni:Calni_0477 outer membrane assembly lipoprotein yfio; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: Outer membrane assembly lipoprotein YfiO; 30S ribosomal protein S12 methylthiotransferase rimO 553885..555189 Flexistipes sinusarabici DSM 4947 10814833 YP_004602794.1 CDS Flexsi_0542 NC_015672.1 555202 555957 D TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440:IPR013105:IPR019734; KEGG: ddf:DEFDS_1956 tetratricopeptide repeat protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat protein; outer membrane assembly lipoprotein YfiO 555202..555957 Flexistipes sinusarabici DSM 4947 10814834 YP_004602795.1 CDS Flexsi_0543 NC_015672.1 556202 556909 D PFAM: Tetratricopeptide repeat; COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase; InterPro IPR002317:IPR015866:IPR002314; KEGG: ddf:DEFDS_1957 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; hypothetical protein 556202..556909 Flexistipes sinusarabici DSM 4947 10814835 YP_004602796.1 CDS Flexsi_0544 NC_015672.1 556910 558178 D PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: ddf:DEFDS_1958 methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Methyltransferase; seryl-tRNA synthetase 556910..558178 Flexistipes sinusarabici DSM 4947 10814836 YP_004602797.1 CDS Flexsi_0545 NC_015672.1 558182 558853 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG2379 Putative glycerate kinase; InterPro IPR007835; KEGG: pmx:PERMA_1579 putative hydroxypyruvate reductase; PFAM: MOFRL; PRIAM: Glycerate kinase; SPTR: Putative hydroxypyruvate reductase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 558182..558853 Flexistipes sinusarabici DSM 4947 10814837 YP_004602798.1 CDS Flexsi_0546 NC_015672.1 558850 560118 D PFAM: MOFRL family; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: ddf:DEFDS_1960 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: Putative uncharacterized protein; glycerate kinase 558850..560118 Flexistipes sinusarabici DSM 4947 10814838 YP_004602799.1 CDS Flexsi_0547 NC_015672.1 560120 560560 D PFAM: Protein of unknown function, DUF606; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: cni:Calni_1539 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; hypothetical protein 560120..560560 Flexistipes sinusarabici DSM 4947 10814839 YP_004602800.1 CDS Flexsi_0548 NC_015672.1 560630 560926 D PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: ddf:DEFDS_1673 AsrR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, AsrR family; ArsR family transcriptional regulator 560630..560926 Flexistipes sinusarabici DSM 4947 10814840 YP_004602801.1 CDS Flexsi_0549 NC_015672.1 560933 561265 D PFAM: Bacterial regulatory protein, arsR family; manually curated; regulatory protein ArsR 560933..561265 Flexistipes sinusarabici DSM 4947 10814841 YP_004602802.1 CDS Flexsi_0553 NC_015672.1 564624 564923 D PFAM: Enterobacterial TraT complement resistance protein; KEGG: mtt:Ftrac_2644 UspA domain-containing protein; SPTR: UspA domain-containing protein; hypothetical protein 564624..564923 Flexistipes sinusarabici DSM 4947 10814845 YP_004602803.1 CDS Flexsi_0554 NC_015672.1 565098 566006 R PFAM: Universal stress protein family; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: mtt:Ftrac_2905 choline/carnitine/betaine transporter; PFAM: BCCT transporter; SPTR: Choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; hypothetical protein complement(565098..566006) Flexistipes sinusarabici DSM 4947 10814846 YP_004602804.1 CDS Flexsi_0555 NC_015672.1 566018 567649 R PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; COGs: COG2703 Hemerythrin; InterPro IPR012827:IPR012312; KEGG: cni:Calni_0209 hemerythrin-like metal-binding protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; choline/carnitine/betaine transporter complement(566018..567649) Flexistipes sinusarabici DSM 4947 10814847 YP_004602805.1 CDS Flexsi_0556 NC_015672.1 567846 568640 D PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: dap:Dacet_2548 cytochrome-c3 hydrogenase; PFAM: Nickel-dependent hydrogenase, large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Cytochrome-c3 hydrogenase; hemerythrin-like metal-binding protein 567846..568640 Flexistipes sinusarabici DSM 4947 10814848 YP_004602806.1 CDS Flexsi_0557 NC_015672.1 569016 570452 D PFAM: Nickel-dependent hydrogenase; COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006311:IPR006137; KEGG: dap:Dacet_2547 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Hydrogenase (NiFe) small subunit HydA; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; cytochrome-c3 hydrogenase 569016..570452 Flexistipes sinusarabici DSM 4947 10814849 YP_004602807.1 CDS Flexsi_0558 NC_015672.1 570460 571425 D PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000160:IPR013767:IPR001633:IPR 001610; KEGG: dbr:Deba_0792 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS; hydrogenase (NiFe) small subunit HydA 570460..571425 Flexistipes sinusarabici DSM 4947 10814850 YP_004602808.1 CDS Flexsi_0559 NC_015672.1 571425 574088 D PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 571425..574088 Flexistipes sinusarabici DSM 4947 10814851 YP_004602809.1 CDS Flexsi_0560 NC_015672.1 574601 575650 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 574601..575650 Flexistipes sinusarabici DSM 4947 10814852 YP_004602810.1 CDS Flexsi_0561 NC_015672.1 576020 577069 D PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 576020..577069 Flexistipes sinusarabici DSM 4947 10814853 YP_004602811.1 CDS Flexsi_0562 NC_015672.1 577539 578858 R PFAM: Transposase DDE domain; COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR000014:IPR001638:IPR013767:IPR013656:IPR 003661:IPR003594:IPR001789:IPR001610; KEGG: gur:Gura_2743 PAS/PAC sensor hybrid histidine kinase; PFAM: Extracellular solute-binding protein, family 3; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SMART: Extracellular solute-binding protein, family 3; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; transposase IS4 family protein complement(577539..578858) Flexistipes sinusarabici DSM 4947 10814854 YP_004602812.1 CDS Flexsi_0563 NC_015672.1 578976 582209 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box; KEGG: ddf:DEFDS_1274 hypothetical protein; SPTR: Putative uncharacterized protein; signal transduction histidine kinase, nitrogen specific, NtrB 578976..582209 Flexistipes sinusarabici DSM 4947 10814855 YP_004602813.1 CDS Flexsi_0564 NC_015672.1 582282 583076 D KEGG: ddf:DEFDS_1273 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 582282..583076 Flexistipes sinusarabici DSM 4947 10814856 YP_004602814.1 CDS Flexsi_0565 NC_015672.1 583080 583943 D PFAM: Bacterial type II secretion system protein G; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1272 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; hypothetical protein 583080..583943 Flexistipes sinusarabici DSM 4947 10814857 YP_004602815.1 CDS Flexsi_0566 NC_015672.1 583930 584832 D PFAM: ABC transporter; KEGG: bao:BAMF_0920 dephospho-CoA kinase dephosphocoenzyme A kinase; SPTR: Dephospho-CoA kinase Dephosphocoenzyme A kinase; ABC transporter-like protein 583930..584832 Flexistipes sinusarabici DSM 4947 10814858 YP_004602816.1 CDS Flexsi_0567 NC_015672.1 584903 585421 R COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cni:Calni_1032 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; hypothetical protein complement(584903..585421) Flexistipes sinusarabici DSM 4947 10814859 YP_004602817.1 CDS Flexsi_0568 NC_015672.1 585547 586059 D PFAM: Nitroreductase family; manually curated; nitroreductase 585547..586059 Flexistipes sinusarabici DSM 4947 10814860 YP_004602818.1 CDS Flexsi_0570 NC_015672.1 587430 588383 D PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 587430..588383 Flexistipes sinusarabici DSM 4947 10814862 YP_004602819.1 CDS Flexsi_0571 NC_015672.1 588389 588637 R COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: ddf:DEFDS_1578 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; hypothetical protein complement(588389..588637) Flexistipes sinusarabici DSM 4947 10814863 YP_004602820.1 CDS Flexsi_0572 NC_015672.1 588918 589658 R PFAM: Glycerophosphoryl diester phosphodiesterase family; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: dap:Dacet_1135 coproporphyrinogen dehydrogenase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen dehydrogenase; glycerophosphoryl diester phosphodiesterase complement(588918..589658) Flexistipes sinusarabici DSM 4947 10814864 YP_004602821.1 CDS Flexsi_0573 NC_015672.1 589744 591009 R PFAM: Radical SAM superfamily; HemN C-terminal region; manually curated; radical SAM protein complement(589744..591009) Flexistipes sinusarabici DSM 4947 10814865 YP_004602822.1 CDS Flexsi_0575 NC_015672.1 591565 592671 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: dap:Dacet_1969 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; integral membrane sensor signal transduction histidine kinase 591565..592671 Flexistipes sinusarabici DSM 4947 10814867 YP_004602823.1 CDS Flexsi_0576 NC_015672.1 592652 593989 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_0209 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; Fis family two component sigma-54 specific transcriptional regulator 592652..593989 Flexistipes sinusarabici DSM 4947 10814868 YP_004602824.1 CDS Flexsi_0577 NC_015672.1 594192 594617 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR004511:IPR002500; KEGG: ppn:Palpr_2548 phosphoadenylyLSUlfate reductase (thioredoxin); PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin); SPTR: Phosphoadenosine phosphosulfate reductase; TIGRFAM: Phosphoadenosine phosphosulphate reductase CysH-type; BadM/Rrf2 family transcriptional regulator complement(594192..594617) Flexistipes sinusarabici DSM 4947 10814869 YP_004602825.1 CDS Flexsi_0578 NC_015672.1 595093 595800 D PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); InterPro IPR010035:IPR003749; KEGG: cpb:Cphamn1_0643 thiamine biosynthesis protein ThiS; PFAM: ThiamineS; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; phosphoadenosine phosphosulfate reductase 595093..595800 Flexistipes sinusarabici DSM 4947 10814870 YP_004602826.1 CDS Flexsi_0579 NC_015672.1 595835 596062 D PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277; KEGG: ppn:Palpr_1214 cys/met metabolism pyridoxaL-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: Cys/Met metabolism pyridoxal-phosphate-dependent protein; thiamine biosynthesis protein ThiS 595835..596062 Flexistipes sinusarabici DSM 4947 10814871 YP_004602827.1 CDS Flexsi_0580 NC_015672.1 596043 597296 D PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: cpb:Cphamn1_0645 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: UBA/THIF-type NAD/FAD binding protein; cysteine synthase 596043..597296 Flexistipes sinusarabici DSM 4947 10814872 YP_004602828.1 CDS Flexsi_0581 NC_015672.1 597286 598095 D PFAM: MoeZ/MoeB domain; ThiF family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: cpb:Cphamn1_0646 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family protein; UBA/THIF-type NAD/FAD binding protein 597286..598095 Flexistipes sinusarabici DSM 4947 10814873 YP_004602829.1 CDS Flexsi_0582 NC_015672.1 598099 598494 D PFAM: Mov34/MPN/PAD-1 family; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117:IPR006067:IPR001455; KEGG: wsu:WS1004 hypothetical protein; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; SirA-like; PRIAM: Ferredoxin--nitrite reductase; SPTR: Putative uncharacterized protein; Mov34/MPN/PAD-1 family protein 598099..598494 Flexistipes sinusarabici DSM 4947 10814874 YP_004602830.1 CDS Flexsi_0583 NC_015672.1 598496 600793 D PFAM: Nitrite and sulphite reductase 4Fe-4S domain; SirA-like protein; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: ddf:DEFDS_2056 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; ferredoxin--nitrite reductase 598496..600793 Flexistipes sinusarabici DSM 4947 10814875 YP_004602831.1 CDS Flexsi_0584 NC_015672.1 600805 601572 D PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); KEGG: cni:Calni_2122 siroheme synthase; SPTR: Siroheme synthase; uroporphyrin-III C-methyltransferase 600805..601572 Flexistipes sinusarabici DSM 4947 10814876 YP_004602832.1 CDS Flexsi_0585 NC_015672.1 601561 602010 R TIGRFAM: siroheme synthase, N-terminal domain; InterPro IPR000866; KEGG: dap:Dacet_2447 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; siroheme synthase complement(601561..602010) Flexistipes sinusarabici DSM 4947 10814877 YP_004602833.1 CDS Flexsi_0586 NC_015672.1 602026 602511 R PFAM: Redoxin; COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; KEGG: ddf:DEFDS_1637 hypothetical protein; SPTR: Putative uncharacterized protein; alkyl hydroperoxide reductase complement(602026..602511) Flexistipes sinusarabici DSM 4947 10814878 YP_004602834.1 CDS Flexsi_0587 NC_015672.1 602704 603423 R PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506:IPR018318; KEGG: cni:Calni_1891 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; PFAM: tRNA methyl transferase-like; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; hypothetical protein complement(602704..603423) Flexistipes sinusarabici DSM 4947 10814879 YP_004602835.1 CDS Flexsi_0588 NC_015672.1 603410 604438 R PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; InterPro IPR007359; KEGG: ddf:DEFDS_0306 hypothetical protein; PFAM: Positive regulator of sigma(E), RseC/MucC; SPTR: Putative uncharacterized protein; tRNA-specific 2-thiouridylase mnmA complement(603410..604438) Flexistipes sinusarabici DSM 4947 10814880 YP_004602836.1 CDS Flexsi_0589 NC_015672.1 604513 604965 R PFAM: Positive regulator of sigma(E), RseC/MucC; COGs: COG0348 Polyferredoxin; KEGG: chy:CHY_2464 iron-sulfur cluster-binding protein; SPTR: Iron-sulfur cluster-binding protein; sigma E positive regulator RseC/MucC complement(604513..604965) Flexistipes sinusarabici DSM 4947 10814881 YP_004602837.1 CDS Flexsi_0590 NC_015672.1 605057 607681 R KEGG: tjr:TherJR_2284 hypothetical protein; SPTR: Putative uncharacterized protein; putative TetR family transcriptional regulator complement(605057..607681) Flexistipes sinusarabici DSM 4947 10814882 YP_004602838.1 CDS Flexsi_0591 NC_015672.1 607961 608860 D COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: tjr:TherJR_2282 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; hypothetical protein 607961..608860 Flexistipes sinusarabici DSM 4947 10814883 YP_004602839.1 CDS Flexsi_0592 NC_015672.1 608864 610843 D PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; KEGG: tjr:TherJR_2281 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome c assembly protein 608864..610843 Flexistipes sinusarabici DSM 4947 10814884 YP_004602840.1 CDS Flexsi_0593 NC_015672.1 610840 611325 D PFAM: Cytochrome C biogenesis protein; KEGG: chy:CHY_1386 hypothetical protein; SPTR: Conserved domain protein; hypothetical protein 610840..611325 Flexistipes sinusarabici DSM 4947 10814885 YP_004602841.1 CDS Flexsi_0594 NC_015672.1 611338 611673 D hypothetical protein 611338..611673 Flexistipes sinusarabici DSM 4947 10814886 YP_004602842.1 CDS Flexsi_0595 NC_015672.1 611666 612559 D hypothetical protein 611666..612559 Flexistipes sinusarabici DSM 4947 10814887 YP_004602843.1 CDS Flexsi_0596 NC_015672.1 612575 613087 D KEGG: tjr:TherJR_2193 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 612575..613087 Flexistipes sinusarabici DSM 4947 10814888 YP_004602844.1 CDS Flexsi_0597 NC_015672.1 613088 613669 D PFAM: Predicted membrane protein (DUF2318); COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: tjr:TherJR_2191 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; hypothetical protein 613088..613669 Flexistipes sinusarabici DSM 4947 10814889 YP_004602845.1 CDS Flexsi_0598 NC_015672.1 613651 614781 D PFAM: Predicted permease; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sso:SSO0688 ABC transporter, ATP binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; hypothetical protein 613651..614781 Flexistipes sinusarabici DSM 4947 10814890 YP_004602846.1 CDS Flexsi_0599 NC_015672.1 614799 615506 D PFAM: ABC transporter; InterPro IPR003838; KEGG: mac:MA1674 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; phosphonate-transporting ATPase 614799..615506 Flexistipes sinusarabici DSM 4947 10814891 YP_004602847.1 CDS Flexsi_0600 NC_015672.1 615499 616605 D PFAM: Predicted permease; KEGG: cni:Calni_1066 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 615499..616605 Flexistipes sinusarabici DSM 4947 10814892 YP_004602848.1 CDS Flexsi_0601 NC_015672.1 616743 617597 D PFAM: DSBA-like thioredoxin domain; InterPro IPR011462; KEGG: caa:Caka_2052 protein of unknown function DUF1568; SPTR: Putative uncharacterized protein; hypothetical protein 616743..617597 Flexistipes sinusarabici DSM 4947 10814893 YP_004602849.1 CDS Flexsi_0602 NC_015672.1 617721 618602 D PFAM: Transposase IS200 like; manually curated; hypothetical protein 617721..618602 Flexistipes sinusarabici DSM 4947 10814894 YP_004602850.1 CDS Flexsi_0604 NC_015672.1 619063 619818 R PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815:IPR005814; KEGG: adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme; biotin synthase; PFAM: Aminotransferase class-III; PRIAM: Adenosylmethionine--8-amino-7-oxononanoate transaminase; SPTR: Adenosylmethionine-8-amino-7-oxononanoate transaminase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; biotin--acetyl-CoA-carboxylase ligase complement(619063..619818) Flexistipes sinusarabici DSM 4947 10814896 YP_004602851.1 CDS Flexsi_0605 NC_015672.1 619920 621212 D PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; COGs: COG0132 Dethiobiotin synthetase; HAMAP: Dethiobiotin synthase; InterPro IPR004472; KEGG: dha:DEHA2G24772g DEHA2G24772p; PRIAM: Dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 619920..621212 Flexistipes sinusarabici DSM 4947 10814897 YP_004602852.1 CDS Flexsi_0606 NC_015672.1 621188 621826 D TIGRFAM: dethiobiotin synthase; COGs: COG0502 Biotin synthase; HAMAP: Biotin synthase; InterPro IPR002684:IPR007197:IPR010722:IPR006638; KEGG: dol:Dole_0682 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: Biotin synthase; dethiobiotin synthetase 621188..621826 Flexistipes sinusarabici DSM 4947 10814898 YP_004602853.1 CDS Flexsi_0607 NC_015672.1 621813 622772 D PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: ddf:DEFDS_1301 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; biotin synthase 621813..622772 Flexistipes sinusarabici DSM 4947 10814899 YP_004602854.1 CDS Flexsi_0608 NC_015672.1 622769 623914 D PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: ddf:DEFDS_1302 hypothetical protein; SPTR: Putative uncharacterized protein; 8-amino-7-oxononanoate synthase 622769..623914 Flexistipes sinusarabici DSM 4947 10814900 YP_004602855.1 CDS Flexsi_0609 NC_015672.1 623893 624495 D COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ddf:DEFDS_1303 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Biotin biosynthesis protein BioC; hypothetical protein 623893..624495 Flexistipes sinusarabici DSM 4947 10814901 YP_004602856.1 CDS Flexsi_0610 NC_015672.1 624492 625247 D PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: cni:Calni_0437 O-acetylhomoserine sulfhydrolase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine sulfhydrolase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; type 11 methyltransferase 624492..625247 Flexistipes sinusarabici DSM 4947 10814902 YP_004602857.1 CDS Flexsi_0611 NC_015672.1 625564 626850 D PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001926; KEGG: cni:Calni_0436 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; O-acetylhomoserine/O-acetylserine sulfhydrylase 625564..626850 Flexistipes sinusarabici DSM 4947 10814903 YP_004602858.1 CDS Flexsi_0612 NC_015672.1 626868 627815 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; KEGG: dat:HRM2_02200 hypothetical protein; SPTR: Putative uncharacterized protein; cysteine synthase 626868..627815 Flexistipes sinusarabici DSM 4947 10814904 YP_004602859.1 CDS Flexsi_0613 NC_015672.1 628037 628375 R KEGG: cni:Calni_0020 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(628037..628375) Flexistipes sinusarabici DSM 4947 10814905 YP_004602860.1 CDS Flexsi_0614 NC_015672.1 628338 629003 R hypothetical protein complement(628338..629003) Flexistipes sinusarabici DSM 4947 10814906 YP_004602861.1 CDS Flexsi_0615 NC_015672.1 629188 629421 R KEGG: gur:Gura_1104 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(629188..629421) Flexistipes sinusarabici DSM 4947 10814907 YP_004602862.1 CDS Flexsi_0616 NC_015672.1 629656 630096 D This gene is disrupted by insertion of repetitive element; manually curated; hypothetical protein 629656..630096 Flexistipes sinusarabici DSM 4947 10814908 YP_004602863.1 CDS Flexsi_0618 NC_015672.1 630546 631595 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); InterPro IPR003593; KEGG: gur:Gura_1106 AAA ATPase; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase; transposase IS4 family protein complement(630546..631595) Flexistipes sinusarabici DSM 4947 10814910 YP_004602864.1 CDS Flexsi_0619 NC_015672.1 632821 633621 D PFAM: Archaeal ATPase; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR003593:IPR010066; KEGG: hch:HCH_00010 dipeptide/oligopeptide/nickel ABC transporter ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transport ATP-binding protein AppF; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; AAA ATPase 632821..633621 Flexistipes sinusarabici DSM 4947 10814911 YP_004602865.1 CDS Flexsi_0620 NC_015672.1 633736 634575 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR010158; KEGG: azl:AZL_d01280 beta-ureidopropionase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-carbamoyl-L-amino-acid hydrolase; SPTR: Beta-ureidopropionase; TIGRFAM: Amidase, hydantoinase/carbamoylase; tmRNA as predicted by Rfam (RF00023), score 217.09; oligopeptide/dipeptide ABC transporter ATPase 633736..634575 Flexistipes sinusarabici DSM 4947 10814912 YP_004602866.1 CDS Flexsi_R0008 NC_015672.1 634588 635823 D PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: ddf:DEFDS_1882 SsrA RNA (tmRNA)-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; hydantoinase/carbamoylase family amidase 634588..635823 Flexistipes sinusarabici DSM 4947 10814913 YP_004602867.1 CDS Flexsi_0622 NC_015672.1 636764 637219 R PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein complement(636764..637219) Flexistipes sinusarabici DSM 4947 10814914 YP_004602868.1 CDS Flexsi_0623 NC_015672.1 637935 639221 R PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; HAMAP: ATP phosphoribosyltransferase regulatory subunit; InterPro IPR002314; KEGG: ddf:DEFDS_2123 ATP phosphoribosyltransferase regulatory subunit; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; PRIAM: Histidine--tRNA ligase; SPTR: ATP phosphoribosyltransferase regulatory subunit; adenylosuccinate synthetase complement(637935..639221) Flexistipes sinusarabici DSM 4947 10814919 YP_004602869.1 CDS Flexsi_0624 NC_015672.1 639230 640342 R PFAM: tRNA synthetase class II core domain (G, H, P, S and T); COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: cni:Calni_0373 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Serine--glyoxylate transaminase; SPTR: Aminotransferase class V; ATP phosphoribosyltransferase regulatory subunit complement(639230..640342) Flexistipes sinusarabici DSM 4947 10814920 YP_004602870.1 CDS Flexsi_0625 NC_015672.1 640351 641496 R PFAM: Aminotransferase class-V; InterPro IPR018649; KEGG: pin:Ping_1904 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; serine--glyoxylate transaminase complement(640351..641496) Flexistipes sinusarabici DSM 4947 10814921 YP_004602871.1 CDS Flexsi_0626 NC_015672.1 641933 642151 D PFAM: Predicted membrane protein (DUF2078); COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: histidine kinase A domain-containing protein; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SPTR: Histidine kinase A domain protein; hypothetical protein 641933..642151 Flexistipes sinusarabici DSM 4947 10814922 YP_004602872.1 CDS Flexsi_0627 NC_015672.1 642198 643538 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_2111 two-component system, NtrC family, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, transcriptional regulator; integral membrane sensor signal transduction histidine kinase 642198..643538 Flexistipes sinusarabici DSM 4947 10814923 YP_004602873.1 CDS Flexsi_0628 NC_015672.1 643531 644856 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR000362:IPR009049; KEGG: dap:Dacet_2886 argininosuccinate lyase; PFAM: Fumarate lyase; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; Fis family two component sigma-54 specific transcriptional regulator 643531..644856 Flexistipes sinusarabici DSM 4947 10814924 YP_004602874.1 CDS Flexsi_0629 NC_015672.1 644858 646234 D PFAM: Lyase; TIGRFAM: argininosuccinate lyase; KEGG: cni:Calni_0196 hypothetical protein; SPTR: Putative uncharacterized protein; argininosuccinate lyase 644858..646234 Flexistipes sinusarabici DSM 4947 10814925 YP_004602875.1 CDS Flexsi_0630 NC_015672.1 646231 647100 D KEGG: ddf:DEFDS_2108 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 646231..647100 Flexistipes sinusarabici DSM 4947 10814926 YP_004602876.1 CDS Flexsi_0631 NC_015672.1 647187 647906 D COGs: COG1469 conserved hypothetical protein; InterPro IPR003801; KEGG: cni:Calni_0405 gtp cyclohydrolase I; PFAM: Protein of unknown function DUF198; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase folE2; TIGRFAM: Protein of unknown function DUF198; hypothetical protein 647187..647906 Flexistipes sinusarabici DSM 4947 10814927 YP_004602877.1 CDS Flexsi_0632 NC_015672.1 647908 648690 D PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR008910:IPR006685; KEGG: ddf:DEFDS_1276 mechanosensitive ion channel, MscS family; PFAM: Mechanosensitive ion channel MscS; Conserved TM helix; SPTR: Mechanosensitive ion channel, MscS family; hypothetical protein 647908..648690 Flexistipes sinusarabici DSM 4947 10814928 YP_004602878.1 CDS Flexsi_0633 NC_015672.1 648834 649643 R PFAM: Mechanosensitive ion channel; Conserved TM helix; KEGG: dap:Dacet_1137 hypothetical protein; SPTR: Putative uncharacterized protein; mechanosensitive ion channel MscS complement(648834..649643) Flexistipes sinusarabici DSM 4947 10814929 YP_004602879.1 CDS Flexsi_0634 NC_015672.1 649759 650061 D COGs: COG1826 Sec-independent protein secretion pathway components; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR003369:IPR006312; KEGG: ddf:DEFDS_2139 twin-arginine translocation system component TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog 2; hypothetical protein 649759..650061 Flexistipes sinusarabici DSM 4947 10814930 YP_004602880.1 CDS Flexsi_0635 NC_015672.1 650160 650540 D PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB; COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033:IPR019822; KEGG: ddf:DEFDS_2140 twin-arginine translocation system component TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Twin-arginine translocation system component TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; Sec-independent protein translocase protein tatA/E-like protein 650160..650540 Flexistipes sinusarabici DSM 4947 10814931 YP_004602881.1 CDS Flexsi_0636 NC_015672.1 650540 651292 D PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR010505:IPR006638:IPR013483; KEGG: cni:Calni_1795 gtp cyclohydrolase subunit MoaA; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A; Sec-independent protein translocase subunit TatC 650540..651292 Flexistipes sinusarabici DSM 4947 10814932 YP_004602882.1 CDS Flexsi_0637 NC_015672.1 651285 652274 D PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: ddf:DEFDS_2142 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: Putative uncharacterized protein; molybdenum cofactor biosynthesis protein A 651285..652274 Flexistipes sinusarabici DSM 4947 10814933 YP_004602883.1 CDS Flexsi_0638 NC_015672.1 652333 653541 D PFAM: Uncharacterized conserved protein (DUF2088); COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 652333..653541 Flexistipes sinusarabici DSM 4947 10814934 YP_004602884.1 CDS Flexsi_0639 NC_015672.1 653725 654774 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 653725..654774 Flexistipes sinusarabici DSM 4947 10814935 YP_004602885.1 CDS Flexsi_0640 NC_015672.1 655103 656779 R PFAM: Transposase DDE domain; KEGG: dap:Dacet_2499 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(655103..656779) Flexistipes sinusarabici DSM 4947 10814936 YP_004602886.1 CDS Flexsi_0641 NC_015672.1 657051 657545 R PFAM: Protein of unknown function (DUF456); COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: ddf:DEFDS_2161 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(657051..657545) Flexistipes sinusarabici DSM 4947 10814937 YP_004602887.1 CDS Flexsi_0642 NC_015672.1 657546 658307 R PFAM: Metallo-beta-lactamase superfamily; hypothetical protein complement(657546..658307) Flexistipes sinusarabici DSM 4947 10814938 YP_004602888.1 CDS Flexsi_0643 NC_015672.1 658314 658889 R manually curated; hypothetical protein complement(658314..658889) Flexistipes sinusarabici DSM 4947 10814939 YP_004602889.1 CDS Flexsi_0645 NC_015672.1 661451 662551 R KEGG: ddf:DEFDS_0190 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(661451..662551) Flexistipes sinusarabici DSM 4947 10814941 YP_004602890.1 CDS Flexsi_0646 NC_015672.1 662538 662861 R PFAM: Protein of unknown function (DUF1049); COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_0189 histidine triad family protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad family protein; hypothetical protein complement(662538..662861) Flexistipes sinusarabici DSM 4947 10814942 YP_004602891.1 CDS Flexsi_0647 NC_015672.1 662858 663364 R PFAM: HIT domain; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent deacetylase; InterPro IPR003000; KEGG: ddf:DEFDS_0188 transcription regulator, Sir2 family; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Transcription regulator, Sir2 family; histidine triad (HIT) protein complement(662858..663364) Flexistipes sinusarabici DSM 4947 10814943 YP_004602892.1 CDS Flexsi_0648 NC_015672.1 663357 664109 R PFAM: Sir2 family; COGs: COG0679 permease; InterPro IPR004776; KEGG: ddf:DEFDS_0071 hypothetical protein; PFAM: Auxin efflux carrier; SPTR: Auxin Efflux Carrier; NAD-dependent deacetylase complement(663357..664109) Flexistipes sinusarabici DSM 4947 10814944 YP_004602893.1 CDS Flexsi_0649 NC_015672.1 664431 665333 R PFAM: Membrane transport protein; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: toc:Toce_0722 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; auxin efflux carrier complement(664431..665333) Flexistipes sinusarabici DSM 4947 10814945 YP_004602894.1 CDS Flexsi_0650 NC_015672.1 665820 668210 D PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2608 Copper chaperone; InterPro IPR006121:IPR006122; KEGG: nth:Nther_1097 copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Copper ion binding protein; TIGRFAM: Copper ion-binding; heavy metal translocating P-type ATPase 665820..668210 Flexistipes sinusarabici DSM 4947 10814946 YP_004602895.1 CDS Flexsi_0651 NC_015672.1 668231 668440 D PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: cdl:CDR20291_2619 hypothetical protein; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein; copper ion binding protein 668231..668440 Flexistipes sinusarabici DSM 4947 10814947 YP_004602896.1 CDS Flexsi_0652 NC_015672.1 668453 668740 D PFAM: Uncharacterised BCR, COG1937; COGs: COG0289 Dihydrodipicolinate reductase; HAMAP: Dihydrodipicolinate reductase; InterPro IPR000846:IPR011770; KEGG: dap:Dacet_2492 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; hypothetical protein 668453..668740 Flexistipes sinusarabici DSM 4947 10814948 YP_004602897.1 CDS Flexsi_0653 NC_015672.1 668767 669570 R PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220:IPR005263; KEGG: ddf:DEFDS_0215 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; dihydrodipicolinate reductase complement(668767..669570) Flexistipes sinusarabici DSM 4947 10814949 YP_004602898.1 CDS Flexsi_0654 NC_015672.1 669584 670465 R PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: ddf:DEFDS_0214 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; dihydrodipicolinate synthase complement(669584..670465) Flexistipes sinusarabici DSM 4947 10814950 YP_004602899.1 CDS Flexsi_0655 NC_015672.1 670480 671295 R PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: dap:Dacet_2487 hydrogenase maturation protease; PFAM: Peptidase A31, hydrogen uptake protein; SPTR: Hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; diaminopimelate epimerase complement(670480..671295) Flexistipes sinusarabici DSM 4947 10814951 YP_004602900.1 CDS Flexsi_0656 NC_015672.1 671362 671844 R PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR011577:IPR000516; KEGG: cni:Calni_0098 ni/fe-hydrogenase, b-type cytochrome subunit; SPTR: Ni/Fe-hydrogenase, b-type cytochrome subunit; TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; hydrogenase maturation protease complement(671362..671844) Flexistipes sinusarabici DSM 4947 10814952 YP_004602901.1 CDS Flexsi_0657 NC_015672.1 671890 672561 R PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: ddf:DEFDS_0076 Ni-Fe hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Ni-Fe hydrogenase, large subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit complement(671890..672561) Flexistipes sinusarabici DSM 4947 10814953 YP_004602902.1 CDS Flexsi_0658 NC_015672.1 672572 674284 R PFAM: Nickel-dependent hydrogenase; COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR006311; KEGG: ddf:DEFDS_0077 Ni-Fe hydrogenase small subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Ni-Fe hydrogenase, small subunit; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; cytochrome-c3 hydrogenase complement(672572..674284) Flexistipes sinusarabici DSM 4947 10814954 YP_004602903.1 CDS Flexsi_0659 NC_015672.1 674303 675400 R PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA); COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: ddf:DEFDS_1899 protein-L-isoaspartate (D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; hydrogenase (NiFe) small subunit HydA complement(674303..675400) Flexistipes sinusarabici DSM 4947 10814955 YP_004602904.1 CDS Flexsi_0660 NC_015672.1 675496 676125 R PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR002638; KEGG: ddf:DEFDS_1900 nicotinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; SPTR: Nicotinate phosphoribosyltransferase; protein-L-isoaspartate O-methyltransferase complement(675496..676125) Flexistipes sinusarabici DSM 4947 10814956 YP_004602905.1 CDS Flexsi_0661 NC_015672.1 676106 677296 R PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; TIGRFAM: putative nicotinate phosphoribosyltransferase; COGs: COG3769 hydrolase (HAD superfamily); InterPro IPR013200:IPR006381:IPR006379; KEGG: pmx:PERMA_1578 mannosyl-3-phosphoglycerate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3; PRIAM: Mannosyl-3-phosphoglycerate phosphatase; SPTR: Glucosyl-3-phosphoglycerate phosphatase; TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; quinolinate phosphoribosyl transferase complement(676106..677296) Flexistipes sinusarabici DSM 4947 10814957 YP_004602906.1 CDS Flexsi_0662 NC_015672.1 677627 678433 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; mannosyl-3-phosphoglycerate phosphatase; KEGG: ddf:DEFDS_0171 hypothetical protein; SPTR: Putative uncharacterized protein; mannosyl-3-phosphoglycerate phosphatase family protein 677627..678433 Flexistipes sinusarabici DSM 4947 10814958 YP_004602907.1 CDS Flexsi_0663 NC_015672.1 678464 679675 D COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase class II; InterPro IPR000362:IPR018951; KEGG: cni:Calni_0380 fumarase; PFAM: Fumarate lyase; Fumarase C, C-terminal; PRIAM: Fumarate hydratase; SPTR: Fumarase; hypothetical protein 678464..679675 Flexistipes sinusarabici DSM 4947 10814959 YP_004602908.1 CDS Flexsi_0664 NC_015672.1 679898 681274 R PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase; fumarate hydratase, class II; COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714:IPR006596; KEGG: ddf:DEFDS_0226 phosphate starvation-induced protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; SPTR: Phosphate starvation-induced protein; class II fumarate hydratase complement(679898..681274) Flexistipes sinusarabici DSM 4947 10814960 YP_004602909.1 CDS Flexsi_0665 NC_015672.1 682099 683400 D PFAM: PhoH-like protein; COGs: COG0279 Phosphoheptose isomerase; HAMAP: Phosphoheptose isomerase; InterPro IPR020620; KEGG: ddf:DEFDS_0227 phosphoheptose isomerase; SPTR: Phosphoheptose isomerase; PhoH family protein 682099..683400 Flexistipes sinusarabici DSM 4947 10814961 YP_004602910.1 CDS Flexsi_0666 NC_015672.1 683645 684238 D PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR004820:IPR004821; KEGG: ddf:DEFDS_0228 glycerol-3-phosphate cytidyltransferase; PFAM: Cytidylyltransferase; SPTR: Glycerol-3-phosphate cytidyltransferase; TIGRFAM: Cytidyltransferase-related; phosphoheptose isomerase 683645..684238 Flexistipes sinusarabici DSM 4947 10814962 YP_004602911.1 CDS Flexsi_0667 NC_015672.1 684242 684718 D PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain; COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR004576; KEGG: cni:Calni_1739 transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; cytidyltransferase-related domain-containing protein 684242..684718 Flexistipes sinusarabici DSM 4947 10814963 YP_004602912.1 CDS Flexsi_0668 NC_015672.1 684720 688046 D PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); InterPro IPR000297; KEGG: cni:Calni_0078 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; transcription-repair coupling factor 684720..688046 Flexistipes sinusarabici DSM 4947 10814964 YP_004602913.1 CDS Flexsi_0669 NC_015672.1 688075 689067 D PFAM: PPIC-type PPIASE domain; InterPro IPR015391; KEGG: ddf:DEFDS_0231 peptidyl-prolyl cis-trans isomerase SurA; PFAM: SurA N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase SurA; PpiC-type peptidyl-prolyl cis-trans isomerase 688075..689067 Flexistipes sinusarabici DSM 4947 10814965 YP_004602914.1 CDS Flexsi_0670 NC_015672.1 689018 689908 D PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; COGs: COG2262 GTPase; InterPro IPR002917:IPR016496; KEGG: cni:Calni_0703 gtp-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; manually curated; SurA domain-containing protein 689018..689908 Flexistipes sinusarabici DSM 4947 10814966 YP_004602915.1 CDS Flexsi_0671 NC_015672.1 689984 691630 D PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_0454 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; GTP-binding proten HflX 689984..691630 Flexistipes sinusarabici DSM 4947 10814967 YP_004602916.1 CDS Flexsi_0672 NC_015672.1 691627 691965 R PFAM: Response regulator receiver domain; COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: ddf:DEFDS_0271 hypothetical protein; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: Putative uncharacterized protein; response regulator receiver protein complement(691627..691965) Flexistipes sinusarabici DSM 4947 10814968 YP_004602917.1 CDS Flexsi_0673 NC_015672.1 692028 692633 D PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: ddf:DEFDS_0341 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; outer membrane lipoprotein carrier protein LolA 692028..692633 Flexistipes sinusarabici DSM 4947 10814969 YP_004602918.1 CDS Flexsi_0674 NC_015672.1 692635 693555 D PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; manually curated; tetraacyldisaccharide 4'-kinase 692635..693555 Flexistipes sinusarabici DSM 4947 10814970 YP_004602919.1 CDS Flexsi_0676 NC_015672.1 693979 695655 D PFAM: Transposase DDE domain; KEGG: ddf:DEFDS_0342 rubrerythrin domain protein; SPTR: Rubrerythrin domain protein; transposase IS4 family protein 693979..695655 Flexistipes sinusarabici DSM 4947 10814972 YP_004602920.1 CDS Flexsi_0677 NC_015672.1 695727 696011 R PFAM: Rubrerythrin; InterPro IPR003748; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF169; SPTR: Putative uncharacterized protein; rubrerythrin domain-containing protein complement(695727..696011) Flexistipes sinusarabici DSM 4947 10814973 YP_004602921.1 CDS Flexsi_0678 NC_015672.1 696126 696935 R PFAM: Uncharacterised ArCR, COG2043; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein complement(696126..696935) Flexistipes sinusarabici DSM 4947 10814974 YP_004602922.1 CDS Flexsi_0679 NC_015672.1 697032 698297 R InterPro IPR007272; KEGG: glo:Glov_1576 protein of unknown function DUF395 YeeE/YedE; PFAM: Protein of unknown function DUF395, YeeE/YedE; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(697032..698297) Flexistipes sinusarabici DSM 4947 10814975 YP_004602923.1 CDS Flexsi_0680 NC_015672.1 698531 699628 D PFAM: YeeE/YedE family (DUF395); KEGG: gsu:GSU1054 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 698531..699628 Flexistipes sinusarabici DSM 4947 10814976 YP_004602924.1 CDS Flexsi_0681 NC_015672.1 699632 699868 D PFAM: SirA-like protein; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013767:IPR003594:IPR001789:IPR000014; KEGG: dal:Dalk_3513 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; hypothetical protein 699632..699868 Flexistipes sinusarabici DSM 4947 10814977 YP_004602925.1 CDS Flexsi_0682 NC_015672.1 699904 702327 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; KEGG: ddf:DEFDS_1682 hypothetical protein; SPTR: Putative uncharacterized protein; PAS/PAC sensor hybrid histidine kinase 699904..702327 Flexistipes sinusarabici DSM 4947 10814978 YP_004602926.1 CDS Flexsi_0683 NC_015672.1 702502 703089 D PFAM: Uncharacterized protein conserved in bacteria (DUF2155); COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: ddf:DEFDS_0915 fumarate hydratase class I subunit beta; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase, class I, beta subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; hypothetical protein 702502..703089 Flexistipes sinusarabici DSM 4947 10814979 YP_004602927.1 CDS Flexsi_0684 NC_015672.1 703133 703711 R PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: ddf:DEFDS_0916 fumarate hydratase class I subunit alpha; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase, class I, alpha subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(703133..703711) Flexistipes sinusarabici DSM 4947 10814980 YP_004602928.1 CDS Flexsi_0685 NC_015672.1 703704 704570 R PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; COGs: COG1049 Aconitase B; InterPro IPR015929:IPR001030:IPR004406; KEGG: ddf:DEFDS_0917 aconitate hydratase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: Aconitate hydratase 2; TIGRFAM: Aconitase B, bacterial; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha complement(703704..704570) Flexistipes sinusarabici DSM 4947 10814981 YP_004602929.1 CDS Flexsi_0686 NC_015672.1 704759 707503 D PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: gsu:GSU1465 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; aconitate hydratase 2 704759..707503 Flexistipes sinusarabici DSM 4947 10814982 YP_004602930.1 CDS Flexsi_0687 NC_015672.1 707990 710233 D PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR001236:IPR011275; KEGG: ddf:DEFDS_0919 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent; isocitrate dehydrogenase 707990..710233 Flexistipes sinusarabici DSM 4947 10814983 YP_004602931.1 CDS Flexsi_0688 NC_015672.1 710302 711276 D PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; InterPro IPR013650:IPR005811:IPR005809; KEGG: ddf:DEFDS_0920 succinyl-CoA synthase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit; malate dehydrogenase 710302..711276 Flexistipes sinusarabici DSM 4947 10814984 YP_004602932.1 CDS Flexsi_0689 NC_015672.1 711429 712604 D PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR003781:IPR005811:IPR005810; KEGG: ddf:DEFDS_0921 succinyl-CoA synthase subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit; succinyl-CoA ligase subunit beta 711429..712604 Flexistipes sinusarabici DSM 4947 10814985 YP_004602933.1 CDS Flexsi_0690 NC_015672.1 712607 713479 D PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; InterPro IPR001450; KEGG: ddf:DEFDS_0922 2-oxoglutarate ferredoxin oxidoreductase subunit delta; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, delta subunit; succinyl-CoA synthetase subunit alpha 712607..713479 Flexistipes sinusarabici DSM 4947 10814986 YP_004602934.1 CDS Flexsi_0691 NC_015672.1 713491 713691 D PFAM: 4Fe-4S binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ddf:DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; 4Fe-4S ferredoxin 713491..713691 Flexistipes sinusarabici DSM 4947 10814987 YP_004602935.1 CDS Flexsi_0692 NC_015672.1 713704 714840 D PFAM: domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: ddf:DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; 2-oxoglutarate synthase 713704..714840 Flexistipes sinusarabici DSM 4947 10814988 YP_004602936.1 CDS Flexsi_0693 NC_015672.1 714841 715656 D PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: ddf:DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit; 2-oxoglutarate synthase 714841..715656 Flexistipes sinusarabici DSM 4947 10814989 YP_004602937.1 CDS Flexsi_0694 NC_015672.1 715659 716195 D PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; InterPro IPR005631; KEGG: cni:Calni_0411 hypothetical protein; PFAM: Protein of unknown function DUF339; SPTR: Putative uncharacterized protein; 2-oxoglutarate synthase 715659..716195 Flexistipes sinusarabici DSM 4947 10814990 YP_004602938.1 CDS Flexsi_0695 NC_015672.1 716241 716534 D PFAM: Protein of unknown function (DUF339); COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR004489; KEGG: ddf:DEFDS_0685 succinate dehydrogenase iron-sulfur protein; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Succinate dehydrogenase, iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; hypothetical protein 716241..716534 Flexistipes sinusarabici DSM 4947 10814991 YP_004602939.1 CDS Flexsi_0696 NC_015672.1 716785 717495 R TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953:IPR004112:IPR011281:IPR014006; KEGG: ddf:DEFDS_0686 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Succinate dehydrogenase, flavoprotein subunit; TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein complement(716785..717495) Flexistipes sinusarabici DSM 4947 10814992 YP_004602940.1 CDS Flexsi_0697 NC_015672.1 717512 719281 R PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; KEGG: ddf:DEFDS_0687 succinate dehydrogenase hydrophobic membrane anchor protein; SPTR: Succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, flavoprotein subunit complement(717512..719281) Flexistipes sinusarabici DSM 4947 10814993 YP_004602941.1 CDS Flexsi_0698 NC_015672.1 719307 719624 R PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; InterPro IPR014314; KEGG: ddf:DEFDS_0688 succinate dehydrogenase cytochrome b subunit; SPTR: Succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase hydrophobic membrane anchor protein complement(719307..719624) Flexistipes sinusarabici DSM 4947 10814994 YP_004602942.1 CDS Flexsi_0699 NC_015672.1 719636 719989 R PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; succinate dehydrogenase, cytochrome b556 subunit complement(719636..719989) Flexistipes sinusarabici DSM 4947 10814995 YP_004602943.1 CDS Flexsi_0700 NC_015672.1 720662 721927 D InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 720662..721927 Flexistipes sinusarabici DSM 4947 10814996 YP_004602944.1 CDS Flexsi_0701 NC_015672.1 722083 723402 D PFAM: Transposase DDE domain; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR005580:IPR014001; KEGG: cni:Calni_1003 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; transposase IS4 family protein 722083..723402 Flexistipes sinusarabici DSM 4947 10814997 YP_004602945.1 CDS Flexsi_0702 NC_015672.1 723689 725272 D PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: carbonate dehydratase; PFAM: Carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: Carbonate dehydratase; DEAD/DEAH box helicase 723689..725272 Flexistipes sinusarabici DSM 4947 10814998 YP_004602946.1 CDS Flexsi_0703 NC_015672.1 725285 725902 D PFAM: Carbonic anhydrase; COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: cni:Calni_1199 acyl-acp thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Acyl-ACP thioesterase; carbonate dehydratase 725285..725902 Flexistipes sinusarabici DSM 4947 10814999 YP_004602947.1 CDS Flexsi_0704 NC_015672.1 725905 726627 D PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase 725905..726627 Flexistipes sinusarabici DSM 4947 10815000 YP_004602948.1 CDS Flexsi_0705 NC_015672.1 726659 726760 R COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_1137 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein; hypothetical protein complement(726659..726760) Flexistipes sinusarabici DSM 4947 10815001 YP_004602949.1 CDS Flexsi_0706 NC_015672.1 727572 728840 R PFAM: Glycosyl transferases group 1; InterPro IPR001296; KEGG: ddf:DEFDS_1138 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase complement(727572..728840) Flexistipes sinusarabici DSM 4947 10815002 YP_004602950.1 CDS Flexsi_0707 NC_015672.1 728842 730113 R PFAM: Glycosyl transferases group 1; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR001538; KEGG: tba:TERMP_00025 mannose-1-phosphate guanylyltransferase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase complement(728842..730113) Flexistipes sinusarabici DSM 4947 10815003 YP_004602951.1 CDS Flexsi_0708 NC_015672.1 730106 730471 R PFAM: Mannose-6-phosphate isomerase; COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: cni:Calni_0784 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; mannose-6-phosphate isomerase complement(730106..730471) Flexistipes sinusarabici DSM 4947 10815004 YP_004602952.1 CDS Flexsi_0709 NC_015672.1 730496 731311 R PFAM: Metallo-beta-lactamase superfamily; InterPro IPR018961; KEGG: ddf:DEFDS_0621 hypothetical protein; PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; SPTR: Putative uncharacterized protein; beta-lactamase domain-containing protein complement(730496..731311) Flexistipes sinusarabici DSM 4947 10815005 YP_004602953.1 CDS Flexsi_0710 NC_015672.1 731315 731686 R PFAM: Domain of unknown function (DUF1992); COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ddf:DEFDS_1852 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; DnaJ domain-containing protein complement(731315..731686) Flexistipes sinusarabici DSM 4947 10815006 YP_004602954.1 CDS Flexsi_0711 NC_015672.1 731757 732458 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197:IPR003739; KEGG: mmh:Mmah_0483 L-lysine 2,3-aminomutase; PFAM: Radical SAM; PRIAM: Lysine 2,3-aminomutase; SPTR: L-lysine 2,3-aminomutase; TIGRFAM: Protein of unknown function DUF160; GntR family transcriptional regulator 731757..732458 Flexistipes sinusarabici DSM 4947 10815007 YP_004602955.1 CDS Flexsi_0712 NC_015672.1 732479 733555 D PFAM: Lysine-2,3-aminomutase; TIGRFAM: KamA family protein; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146; KEGG: tac:Ta1498 glutamine synthetase; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Probable glutamine synthetase; lysine 2,3-aminomutase YodO family protein 732479..733555 Flexistipes sinusarabici DSM 4947 10815008 YP_004602956.1 CDS Flexsi_0713 NC_015672.1 733762 735078 D PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680:IPR004722; KEGG: cni:Calni_0901 dihydroorotase; PFAM: Amidohydrolase 1; PRIAM: Dihydroorotase; SPTR: Dihydroorotase; TIGRFAM: Dihydroorotase multifunctional complex type; glutamate--ammonia ligase 733762..735078 Flexistipes sinusarabici DSM 4947 10815009 YP_004602957.1 CDS Flexsi_0714 NC_015672.1 735678 736949 R PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase; InterPro IPR006132:IPR006131:IPR002082; KEGG: ddf:DEFDS_0841 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; dihydroorotase, multifunctional complex type complement(735678..736949) Flexistipes sinusarabici DSM 4947 10815010 YP_004602958.1 CDS Flexsi_0715 NC_015672.1 736949 737878 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; HAMAP: Bifunctional protein pyrR; InterPro IPR000836; KEGG: ddf:DEFDS_0842 bifunctional pyrimidine biosynthesis protein PyrR; PFAM: Phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Bifunctional protein pyrR; aspartate carbamoyltransferase complement(736949..737878) Flexistipes sinusarabici DSM 4947 10815011 YP_004602959.1 CDS Flexsi_0716 NC_015672.1 737881 738459 R PFAM: Phosphoribosyl transferase domain; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: glutamate synthase (NADPH) GltB2 subunit; PFAM: Glutamate synthase, central-C; SPTR: Ferredoxin-dependent glutamate synthase; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase complement(737881..738459) Flexistipes sinusarabici DSM 4947 10815012 YP_004602960.1 CDS Flexsi_0717 NC_015672.1 738867 740504 D PFAM: Conserved region in glutamate synthase; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; ferredoxin-dependent glutamate synthase 738867..740504 Flexistipes sinusarabici DSM 4947 10815013 YP_004602961.1 CDS Flexsi_0718 NC_015672.1 740576 741943 R PFAM: Transposase domain (DUF772); COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005671; KEGG: ddf:DEFDS_1662 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: 2-isopropylmalate synthase; SPTR: 2-isopropylmalate synthase; TIGRFAM: Bacterial 2-isopropylmalate synthase; transposase IS4 family protein complement(740576..741943) Flexistipes sinusarabici DSM 4947 10815014 YP_004602962.1 CDS Flexsi_0719 NC_015672.1 742089 743642 R PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: cni:Calni_0491 cdp-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; 2-isopropylmalate synthase complement(742089..743642) Flexistipes sinusarabici DSM 4947 10815015 YP_004602963.1 CDS Flexsi_0720 NC_015672.1 743732 744460 R PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; InterPro IPR003817:IPR004428; KEGG: ddf:DEFDS_1664 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase; TIGRFAM: Phosphatidylserine decarboxylase-related protein; CDP-diacylglycerol/serine O-phosphatidyltransferase complement(743732..744460) Flexistipes sinusarabici DSM 4947 10815016 YP_004602964.1 CDS Flexsi_0721 NC_015672.1 744461 745078 R PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; manually curated; phosphatidylserine decarboxylase proenzyme complement(744461..745078) Flexistipes sinusarabici DSM 4947 10815017 YP_004602965.1 CDS Flexsi_0723 NC_015672.1 746616 747665 D PFAM: Transposase DDE domain; Transposase domain (DUF772); transposase IS4 family protein 746616..747665 Flexistipes sinusarabici DSM 4947 10815019 YP_004602966.1 CDS Flexsi_0724 NC_015672.1 747829 748017 R COGs: COG0059 Ketol-acid reductoisomerase; HAMAP: Ketol-acid reductoisomerase; InterPro IPR013116:IPR000506:IPR013023; KEGG: ddf:DEFDS_1665 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; hypothetical protein complement(747829..748017) Flexistipes sinusarabici DSM 4947 10815020 YP_004602967.1 CDS Flexsi_0725 NC_015672.1 748361 749377 R PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: ddf:DEFDS_1666 acetolactate synthase small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; ketol-acid reductoisomerase complement(748361..749377) Flexistipes sinusarabici DSM 4947 10815021 YP_004602968.1 CDS Flexsi_0726 NC_015672.1 749387 749899 R PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: ddf:DEFDS_1667 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; acetolactate synthase small subunit complement(749387..749899) Flexistipes sinusarabici DSM 4947 10815022 YP_004602969.1 CDS Flexsi_0727 NC_015672.1 749903 751603 R PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR000581:IPR004404; KEGG: ddf:DEFDS_1668 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; acetolactate synthase large subunit complement(749903..751603) Flexistipes sinusarabici DSM 4947 10815023 YP_004602970.1 CDS Flexsi_0728 NC_015672.1 751626 753281 R PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; InterPro IPR002514; KEGG: kol:Kole_0767 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911; SPTR: Putative uncharacterized protein; dihydroxy-acid dehydratase complement(751626..753281) Flexistipes sinusarabici DSM 4947 10815024 YP_004602971.1 CDS Flexsi_0729 NC_015672.1 753902 754210 D PFAM: Transposase; InterPro IPR001584; KEGG: ppd:Ppro_1841 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase, catalytic region; transposase IS3/IS911 family protein 753902..754210 Flexistipes sinusarabici DSM 4947 10815025 YP_004602972.1 CDS Flexsi_0730 NC_015672.1 754267 755196 D PFAM: Integrase core domain; COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR000583; KEGG: tcx:Tcr_1692 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: Glutamine amidotransferase, class-II; PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glutamine--fructose-6-phosphate transaminase; integrase catalytic subunit 754267..755196 Flexistipes sinusarabici DSM 4947 10815026 YP_004602973.1 CDS Flexsi_0731 NC_015672.1 755285 755872 D PFAM: Glutamine amidotransferases class-II; This gene is disrupted by insertion of repetitive element; manually curated; glutamine--fructose-6-phosphate transaminase 755285..755872 Flexistipes sinusarabici DSM 4947 10815027 YP_004602974.1 CDS Flexsi_0733 NC_015672.1 756691 757740 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: mac:MA2579 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase, IS21; transposase IS4 family protein 756691..757740 Flexistipes sinusarabici DSM 4947 10815029 YP_004602975.1 CDS Flexsi_0734 NC_015672.1 758065 759309 R PFAM: Integrase core domain; manually curated; integrase catalytic subunit complement(758065..759309) Flexistipes sinusarabici DSM 4947 10815030 YP_004602976.1 CDS Flexsi_0736 NC_015672.1 761088 762137 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(761088..762137) Flexistipes sinusarabici DSM 4947 10815032 YP_004602977.1 CDS Flexsi_0738 NC_015672.1 762746 763432 R PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; IstB domain-containing protein ATP-binding protein complement(762746..763432) Flexistipes sinusarabici DSM 4947 10815034 YP_004602978.1 CDS Flexsi_0739 NC_015672.1 763419 764942 R PFAM: Integrase core domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; integrase catalytic subunit complement(763419..764942) Flexistipes sinusarabici DSM 4947 10815035 YP_004602979.1 CDS Flexsi_0740 NC_015672.1 765112 765828 D PFAM: Transposase DDE domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: sat:SYN_02695 polysaccharide export periplasmic protein; PFAM: Soluble ligand binding domain; SPTR: Periplasmic protein involved in polysaccharide export; transposase IS4 family protein 765112..765828 Flexistipes sinusarabici DSM 4947 10815036 YP_004602980.1 CDS Flexsi_0741 NC_015672.1 765928 768900 D PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain; InterPro IPR003856; KEGG: svo:SVI_1467 chain length determinant protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Chain length determinant protein; soluble ligand binding domain-containing protein 765928..768900 Flexistipes sinusarabici DSM 4947 10815037 YP_004602981.1 CDS Flexsi_0742 NC_015672.1 768908 769822 D PFAM: Chain length determinant protein; KEGG: nde:NIDE0888 hypothetical protein; SPTR: Putative uncharacterized protein; lipopolysaccharide biosynthesis protein 768908..769822 Flexistipes sinusarabici DSM 4947 10815038 YP_004602982.1 CDS Flexsi_0743 NC_015672.1 769819 771333 D COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: dap:Dacet_2770 glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyl transferase, family 4, conserved region; hypothetical protein 769819..771333 Flexistipes sinusarabici DSM 4947 10815039 YP_004602983.1 CDS Flexsi_0744 NC_015672.1 771344 772942 R PFAM: Glycosyl transferase family 4; InterPro IPR007165; KEGG: ddf:DEFDS_0628 hypothetical protein; PFAM: Membrane protein of unknown function; SPTR: Putative uncharacterized protein; glycosyl transferase family protein complement(771344..772942) Flexistipes sinusarabici DSM 4947 10815040 YP_004602984.1 CDS Flexsi_0745 NC_015672.1 773319 773705 D PFAM: Membrane protein of unknown function; KEGG: cni:Calni_0841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 773319..773705 Flexistipes sinusarabici DSM 4947 10815041 YP_004602985.1 CDS Flexsi_0746 NC_015672.1 773687 774169 D COGs: COG4517 conserved hypothetical protein; InterPro IPR014949; KEGG: ddf:DEFDS_0630 hypothetical protein; PFAM: Protein of unknown function DUF1820; SPTR: Putative uncharacterized protein; hypothetical protein 773687..774169 Flexistipes sinusarabici DSM 4947 10815042 YP_004602986.1 CDS Flexsi_0747 NC_015672.1 774166 774447 D PFAM: Domain of unknown function (DUF1820); COGs: COG0795 permease; InterPro IPR005495; KEGG: ddf:DEFDS_0631 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; hypothetical protein 774166..774447 Flexistipes sinusarabici DSM 4947 10815043 YP_004602987.1 CDS Flexsi_0748 NC_015672.1 774444 775481 D PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: dap:Dacet_1505 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 774444..775481 Flexistipes sinusarabici DSM 4947 10815044 YP_004602988.1 CDS Flexsi_0749 NC_015672.1 775478 776563 D PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR001804:IPR004429; KEGG: ddf:DEFDS_0681 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; YjgP/YjgQ family permease 775478..776563 Flexistipes sinusarabici DSM 4947 10815045 YP_004602989.1 CDS Flexsi_0750 NC_015672.1 776671 777747 D PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741:IPR001450:IPR004017; KEGG: cni:Calni_1714 hypothetical protein; PFAM: Protein of unknown function DUF162; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Cysteine-rich region, CCG; SPTR: Putative uncharacterized protein; 3-isopropylmalate dehydrogenase 776671..777747 Flexistipes sinusarabici DSM 4947 10815046 YP_004602990.1 CDS Flexsi_0751 NC_015672.1 777925 780057 R PFAM: Cysteine-rich domain; Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: ddf:DEFDS_1348 hypothetical protein; PFAM: Protein of unknown function DUF162; SPTR: Putative uncharacterized protein; lactate utilization protein B/C complement(777925..780057) Flexistipes sinusarabici DSM 4947 10815047 YP_004602991.1 CDS Flexsi_0752 NC_015672.1 780066 780539 R PFAM: Uncharacterised ACR, YkgG family COG1556; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: cni:Calni_1350 extracellular solute-binding protein, family 7; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; lactate utilization protein B/C complement(780066..780539) Flexistipes sinusarabici DSM 4947 10815048 YP_004602992.1 CDS Flexsi_0753 NC_015672.1 780805 781890 D PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: cni:Calni_1351 tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; family 7 extracellular solute-binding protein 780805..781890 Flexistipes sinusarabici DSM 4947 10815049 YP_004602993.1 CDS Flexsi_0754 NC_015672.1 782103 782612 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: cni:Calni_1352 trap dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 782103..782612 Flexistipes sinusarabici DSM 4947 10815050 YP_004602994.1 CDS Flexsi_0755 NC_015672.1 782602 783924 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: cni:Calni_1348 fad linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; TRAP dicarboxylate transporter subunit DctM 782602..783924 Flexistipes sinusarabici DSM 4947 10815051 YP_004602995.1 CDS Flexsi_0756 NC_015672.1 783936 785309 D PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR001450:IPR004017; KEGG: cni:Calni_1349 hypothetical protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; D-lactate dehydrogenase 783936..785309 Flexistipes sinusarabici DSM 4947 10815052 YP_004602996.1 CDS Flexsi_0757 NC_015672.1 785311 786564 D PFAM: Cysteine-rich domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: cni:Calni_1712 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; hypothetical protein 785311..786564 Flexistipes sinusarabici DSM 4947 10815053 YP_004602997.1 CDS Flexsi_0758 NC_015672.1 786533 787267 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: sul:SYO3AOP1_0595 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; regulatory protein GntR 786533..787267 Flexistipes sinusarabici DSM 4947 10815054 YP_004602998.1 CDS Flexsi_0759 NC_015672.1 787440 788018 D PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002880:IPR019752:IPR019456:IPR001450:IPR 011766:IPR011895; KEGG: ddf:DEFDS_0568 pyruvate:ferredoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; CDP-alcohol phosphatidyltransferase 787440..788018 Flexistipes sinusarabici DSM 4947 10815055 YP_004602999.1 CDS Flexsi_0760 NC_015672.1 788417 791998 R PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: ddf:DEFDS_0569 acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Acyl-CoA synthase; pyruvate ferredoxin/flavodoxin oxidoreductase complement(788417..791998) Flexistipes sinusarabici DSM 4947 10815056 YP_004603000.1 CDS Flexsi_0761 NC_015672.1 792502 794160 D PFAM: AMP-binding enzyme; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: dap:Dacet_1688 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; long-chain-fatty-acid--CoA ligase 792502..794160 Flexistipes sinusarabici DSM 4947 10815057 YP_004603001.1 CDS Flexsi_0762 NC_015672.1 794787 795125 D PFAM: Nitrogen regulatory protein P-II; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR004809; KEGG: ddf:DEFDS_1474 glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: Glutamine synthetase type I; nitrogen regulatory protein P-II 794787..795125 Flexistipes sinusarabici DSM 4947 10815058 YP_004603002.1 CDS Flexsi_0763 NC_015672.1 795159 796571 D PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase, type I 795159..796571 Flexistipes sinusarabici DSM 4947 10815059 YP_004603003.1 CDS Flexsi_0764 NC_015672.1 797408 797995 D PFAM: CheD; manually curated; protein CheD 797408..797995 Flexistipes sinusarabici DSM 4947 10815061 YP_004603004.1 CDS Flexsi_0766 NC_015672.1 798587 804616 D PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; NMT1/THI5 like; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160; KEGG: hha:Hhal_0365 response regulator receiver modulated diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; multi-sensor hybrid histidine kinase 798587..804616 Flexistipes sinusarabici DSM 4947 10815063 YP_004603005.1 CDS Flexsi_0767 NC_015672.1 804619 805599 D PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR001789:IPR013767:IPR003661:IPR003594:IPR 000014:IPR001610; KEGG: signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SPTR: Putative uncharacterized protein; TIGRFAM: PAS; response regulator receiver modulated diguanylate cyclase 804619..805599 Flexistipes sinusarabici DSM 4947 10815064 YP_004603006.1 CDS Flexsi_0768 NC_015672.1 805602 807524 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR012912; KEGG: xbo:XBJ1_3617 hypothetical protein; PFAM: Plasmid pRiA4b ORF-3-like; SPTR: Putative uncharacterized protein; multi-sensor hybrid histidine kinase 805602..807524 Flexistipes sinusarabici DSM 4947 10815065 YP_004603007.1 CDS Flexsi_0769 NC_015672.1 808243 809526 D PFAM: Plasmid pRiA4b ORF-3-like protein; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; plasmid pRiA4b ORF-3 family protein 808243..809526 Flexistipes sinusarabici DSM 4947 10815066 YP_004603008.1 CDS Flexsi_0770 NC_015672.1 809945 810994 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG2186 Transcriptional regulators; InterPro IPR000524; KEGG: dal:Dalk_0697 regulatory protein GntR HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Regulatory protein GntR HTH; transposase IS4 family protein 809945..810994 Flexistipes sinusarabici DSM 4947 10815067 YP_004603009.1 CDS Flexsi_0771 NC_015672.1 811724 812503 D PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR011533; KEGG: drt:Dret_0130 choline dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; PRIAM: Choline dehydrogenase; SPTR: Choline dehydrogenase; TIGRFAM: Choline dehydrogenase; regulatory protein GntR 811724..812503 Flexistipes sinusarabici DSM 4947 10815068 YP_004603010.1 CDS Flexsi_0772 NC_015672.1 812531 814174 D PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR011264; KEGG: drt:Dret_0129 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: Betaine-aldehyde dehydrogenase; SPTR: Glycine betaine aldehyde dehydrogenase; TIGRFAM: Betaine aldehyde dehydrogenase; choline dehydrogenase 812531..814174 Flexistipes sinusarabici DSM 4947 10815069 YP_004603011.1 CDS Flexsi_0773 NC_015672.1 814190 815662 D PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: drt:Dret_0128 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; betaine aldehyde dehydrogenase 814190..815662 Flexistipes sinusarabici DSM 4947 10815070 YP_004603012.1 CDS Flexsi_0774 NC_015672.1 815759 816721 D PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197:IPR012840; KEGG: ddf:DEFDS_1634 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM; SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic-like; glycine betaine ABC transporter periplasmic subunit 815759..816721 Flexistipes sinusarabici DSM 4947 10815071 YP_004603013.1 CDS Flexsi_0775 NC_015672.1 816824 817564 R PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: rsd:TGRD_582 putative ribonucleoside-triphosphate reductase; SPTR: Putative ribonucleoside-triphosphate reductase; anaerobic ribonucleoside-triphosphate reductase activating protein complement(816824..817564) Flexistipes sinusarabici DSM 4947 10815072 YP_004603014.1 CDS Flexsi_0776 NC_015672.1 817724 817933 R COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144:IPR012833; KEGG: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; hypothetical protein complement(817724..817933) Flexistipes sinusarabici DSM 4947 10815073 YP_004603015.1 CDS Flexsi_0777 NC_015672.1 818183 820231 R PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR013196:IPR004143; KEGG: chy:CHY_2371 BirA bifunctional protein; SPTR: BirA bifunctional protein; anaerobic ribonucleoside-triphosphate reductase complement(818183..820231) Flexistipes sinusarabici DSM 4947 10815074 YP_004603016.1 CDS Flexsi_0778 NC_015672.1 821019 821774 R PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor complement(821019..821774) Flexistipes sinusarabici DSM 4947 10815075 YP_004603017.1 CDS Flexsi_0779 NC_015672.1 821965 823284 D PFAM: Transposase DDE domain; COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814:IPR005815; KEGG: amc:MADE_02212 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: Aminotransferase class-III; PRIAM: Adenosylmethionine--8-amino-7-oxononanoate transaminase; SPTR: Adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; transposase IS4 family protein 821965..823284 Flexistipes sinusarabici DSM 4947 10815076 YP_004603018.1 CDS Flexsi_0780 NC_015672.1 823360 824652 D PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; COGs: COG0132 Dethiobiotin synthetase; HAMAP: Dethiobiotin synthase; InterPro IPR004472; KEGG: pmm:PMM1471 putative dethiobiotin synthase; PRIAM: Dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 823360..824652 Flexistipes sinusarabici DSM 4947 10815077 YP_004603019.1 CDS Flexsi_0781 NC_015672.1 824628 825266 D TIGRFAM: dethiobiotin synthase; COGs: COG0502 Biotin synthase; HAMAP: Biotin synthase; InterPro IPR007197:IPR010722:IPR006638:IPR002684; KEGG: dol:Dole_0682 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: Biotin synthase; dethiobiotin synthetase 824628..825266 Flexistipes sinusarabici DSM 4947 10815078 YP_004603020.1 CDS Flexsi_0782 NC_015672.1 825253 826212 D PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: ddf:DEFDS_1301 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; biotin synthase 825253..826212 Flexistipes sinusarabici DSM 4947 10815079 YP_004603021.1 CDS Flexsi_0783 NC_015672.1 826209 827360 D PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: dsa:Desal_1448 hypothetical protein; SPTR: Putative uncharacterized protein; 8-amino-7-oxononanoate synthase 826209..827360 Flexistipes sinusarabici DSM 4947 10815080 YP_004603022.1 CDS Flexsi_0784 NC_015672.1 827339 827941 D InterPro IPR013216; KEGG: ddf:DEFDS_1303 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Biotin biosynthesis protein BioC; hypothetical protein 827339..827941 Flexistipes sinusarabici DSM 4947 10815081 YP_004603023.1 CDS Flexsi_0785 NC_015672.1 827938 828687 D PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; COGs: COG1576 conserved hypothetical protein; HAMAP: Ribosomal RNA large subunit methyltransferase H; InterPro IPR003742; KEGG: cni:Calni_2051 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase H; type 11 methyltransferase 827938..828687 Flexistipes sinusarabici DSM 4947 10815082 YP_004603024.1 CDS Flexsi_0786 NC_015672.1 829203 829667 D PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: dap:Dacet_2921 transcriptional regulator, TraR/DksA family; SPTR: Transcriptional regulator, TraR/DksA family; ribosomal RNA large subunit methyltransferase H 829203..829667 Flexistipes sinusarabici DSM 4947 10815083 YP_004603025.1 CDS Flexsi_0787 NC_015672.1 829678 830040 D PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR011258:IPR006124:IPR005995; KEGG: ddf:DEFDS_1896 phosphoglycerate mutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; TraR/DksA family transcriptional regulator 829678..830040 Flexistipes sinusarabici DSM 4947 10815084 YP_004603026.1 CDS Flexsi_0788 NC_015672.1 830078 831607 D PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: cni:Calni_1596 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 830078..831607 Flexistipes sinusarabici DSM 4947 10815085 YP_004603027.1 CDS Flexsi_0789 NC_015672.1 831585 832265 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR020829:IPR006424; KEGG: ddf:DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; phosphoribosyltransferase 831585..832265 Flexistipes sinusarabici DSM 4947 10815086 YP_004603028.1 CDS Flexsi_0790 NC_015672.1 832347 833345 D PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: cni:Calni_1593 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; glyceraldehyde-3-phosphate dehydrogenase, type I 832347..833345 Flexistipes sinusarabici DSM 4947 10815087 YP_004603029.1 CDS Flexsi_0791 NC_015672.1 833560 834738 D PFAM: Phosphoglycerate kinase; COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR010663:IPR002301; KEGG: cni:Calni_1082 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; phosphoglycerate kinase 833560..834738 Flexistipes sinusarabici DSM 4947 10815088 YP_004603030.1 CDS Flexsi_0792 NC_015672.1 835024 837825 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: ddf:DEFDS_1186 lipoprotein signal peptidase II; PFAM: Peptidase A8, signal peptidase II; SPTR: Lipoprotein signal peptidase; TIGRFAM: Peptidase A8, signal peptidase II; isoleucyl-tRNA synthetase 835024..837825 Flexistipes sinusarabici DSM 4947 10815089 YP_004603031.1 CDS Flexsi_0793 NC_015672.1 837870 838346 D PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); HAMAP: Bifunctional purine biosynthesis protein purH; InterPro IPR011607:IPR013982:IPR002695; KEGG: ddf:DEFDS_1187 bifunctional purine biosynthesis protein PurH; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, formylation region; SPTR: Bifunctional purine biosynthesis protein purH; TIGRFAM: AICARFT/IMPCHase bienzyme; lipoprotein signal peptidase 837870..838346 Flexistipes sinusarabici DSM 4947 10815090 YP_004603032.1 CDS Flexsi_0794 NC_015672.1 838336 839886 D PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR020562:IPR020561:IPR020560:IPR000115; KEGG: ddf:DEFDS_1188 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 838336..839886 Flexistipes sinusarabici DSM 4947 10815091 YP_004603033.1 CDS Flexsi_0795 NC_015672.1 840063 841346 D PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dap:Dacet_1774 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylamine--glycine ligase 840063..841346 Flexistipes sinusarabici DSM 4947 10815092 YP_004603034.1 CDS Flexsi_0796 NC_015672.1 841343 841849 D PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070:IPR004388; KEGG: dap:Dacet_1775 SUA5/YciO/YrdC domain protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: SUA5/yciO/yrdC domain protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; phosphoribosylaminoimidazole carboxylase catalytic subunit 841343..841849 Flexistipes sinusarabici DSM 4947 10815093 YP_004603035.1 CDS Flexsi_0797 NC_015672.1 841853 842461 D PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; KEGG: caa:Caka_2024 hypothetical protein; SPTR: Putative uncharacterized protein; Sua5/YciO/YrdC/YwlC family protein 841853..842461 Flexistipes sinusarabici DSM 4947 10815094 YP_004603036.1 CDS Flexsi_0798 NC_015672.1 842468 842887 D KEGG: ddf:DEFDS_0308 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 842468..842887 Flexistipes sinusarabici DSM 4947 10815095 YP_004603037.1 CDS Flexsi_0799 NC_015672.1 842912 843349 R COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: ddf:DEFDS_0765 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Acetylornithine deacetylase; hypothetical protein complement(842912..843349) Flexistipes sinusarabici DSM 4947 10815096 YP_004603038.1 CDS Flexsi_0800 NC_015672.1 843673 844749 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: ddf:DEFDS_0766 acetyltransferase GNAT family; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; peptidase M20 complement(843673..844749) Flexistipes sinusarabici DSM 4947 10815097 YP_004603039.1 CDS Flexsi_0801 NC_015672.1 844736 845227 R PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 complement(844736..845227) Flexistipes sinusarabici DSM 4947 10815098 YP_004603040.1 CDS Flexsi_0802 NC_015672.1 845901 846614 R PFAM: Sel1 repeat; KEGG: nhl:Nhal_1311 hypothetical protein; SPTR: Putative uncharacterized protein; Sel1 domain-containing protein repeat-containing protein complement(845901..846614) Flexistipes sinusarabici DSM 4947 10815100 YP_004603041.1 CDS Flexsi_0803 NC_015672.1 846793 847635 D COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509:IPR005888; KEGG: dap:Dacet_2762 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; hypothetical protein 846793..847635 Flexistipes sinusarabici DSM 4947 10815101 YP_004603042.1 CDS Flexsi_0804 NC_015672.1 847659 848813 R PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: str:Sterm_2402 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-glucose 4,6-dehydratase complement(847659..848813) Flexistipes sinusarabici DSM 4947 10815102 YP_004603043.1 CDS Flexsi_0805 NC_015672.1 848825 849667 R PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; manually curated; dTDP-4-dehydrorhamnose reductase complement(848825..849667) Flexistipes sinusarabici DSM 4947 10815103 YP_004603044.1 CDS Flexsi_0808 NC_015672.1 852813 853931 D PFAM: Receptor family ligand binding region; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dap:Dacet_0893 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; extracellular ligand-binding receptor 852813..853931 Flexistipes sinusarabici DSM 4947 10815106 YP_004603045.1 CDS Flexsi_0809 NC_015672.1 854004 854906 D PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dap:Dacet_0894 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; ABC transporter 854004..854906 Flexistipes sinusarabici DSM 4947 10815107 YP_004603046.1 CDS Flexsi_0810 NC_015672.1 854909 856144 D PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0346 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 854909..856144 Flexistipes sinusarabici DSM 4947 10815108 YP_004603047.1 CDS Flexsi_0811 NC_015672.1 856128 856922 D PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dap:Dacet_0896 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; monosaccharide-transporting ATPase 856128..856922 Flexistipes sinusarabici DSM 4947 10815109 YP_004603048.1 CDS Flexsi_0812 NC_015672.1 856909 857619 D PFAM: ABC transporter; manually curated; Fe(3+)-transporting ATPase 856909..857619 Flexistipes sinusarabici DSM 4947 10815110 YP_004603049.1 CDS Flexsi_0814 NC_015672.1 858660 859709 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: ddf:DEFDS_0574 phosphoesterase; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Phosphoesterase; transposase IS4 family protein 858660..859709 Flexistipes sinusarabici DSM 4947 10815112 YP_004603050.1 CDS Flexsi_0815 NC_015672.1 859991 860983 R PFAM: DHH family; DHHA1 domain; KEGG: dap:Dacet_1862 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; phosphoesterase RecJ domain-containing protein complement(859991..860983) Flexistipes sinusarabici DSM 4947 10815113 YP_004603051.1 CDS Flexsi_0816 NC_015672.1 860987 862036 R COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR005653:IPR007543; KEGG: cni:Calni_0052 OstA family protein; PFAM: OstA-like protein; Organic solvent tolerance protein; SPTR: OstA family protein; manually curated; hypothetical protein complement(860987..862036) Flexistipes sinusarabici DSM 4947 10815114 YP_004603052.1 CDS Flexsi_0817 NC_015672.1 862144 864294 R PFAM: OstA-like protein; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: cni:Calni_0051 FolC bifunctional protein; PFAM: Mur ligase, central; SPTR: FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; OstA family protein complement(862144..864294) Flexistipes sinusarabici DSM 4947 10815115 YP_004603053.1 CDS Flexsi_0818 NC_015672.1 864291 865415 R PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; InterPro IPR000022:IPR000438; KEGG: ddf:DEFDS_0579 acetyl-CoA carboxylase carboxyl transferase subunit beta; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase complement(864291..865415) Flexistipes sinusarabici DSM 4947 10815116 YP_004603054.1 CDS Flexsi_0819 NC_015672.1 865416 866261 R PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta complement(865416..866261) Flexistipes sinusarabici DSM 4947 10815117 YP_004603055.1 CDS Flexsi_0820 NC_015672.1 866483 866773 D This gene is disrupted by insertion of repetitive element; manually curated; hypothetical protein 866483..866773 Flexistipes sinusarabici DSM 4947 10815118 YP_004603056.1 CDS Flexsi_0822 NC_015672.1 867811 869076 R KEGG: ddf:DEFDS_1470 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(867811..869076) Flexistipes sinusarabici DSM 4947 10815120 YP_004603057.1 CDS Flexsi_0823 NC_015672.1 870024 872093 D PFAM: Bacterial virulence factor lipase N-terminal; InterPro IPR000182:IPR012772; KEGG: bha:BH0920 diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Diaminobutyrate acetyltransferase; SPTR: L-2,4-diaminobutyric acid acetyl transferase; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; hypothetical protein 870024..872093 Flexistipes sinusarabici DSM 4947 10815121 YP_004603058.1 CDS Flexsi_0824 NC_015672.1 872553 873056 D PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814:IPR004637:IPR012773; KEGG: diaminobutyrate/2-oxoglutarate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Diaminobutyrate--2-oxoglutarate transaminase; SPTR: Diaminobutyrate/2-oxoglutarate aminotransferase; TIGRFAM: Diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-2-oxoglutarate transaminase; L-2,4-diaminobutyric acid acetyltransferase 872553..873056 Flexistipes sinusarabici DSM 4947 10815122 YP_004603059.1 CDS Flexsi_0825 NC_015672.1 873143 874417 D PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; HAMAP: L-ectoine synthase; InterPro IPR010462; KEGG: dal:Dalk_1172 L-ectoine synthase; PFAM: Ectoine synthase; PRIAM: Ectoine synthase; SPTR: L-ectoine synthase; diaminobutyrate/2-oxoglutarate aminotransferase 873143..874417 Flexistipes sinusarabici DSM 4947 10815123 YP_004603060.1 CDS Flexsi_0826 NC_015672.1 874417 874809 D PFAM: Ectoine synthase; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: ddf:DEFDS_0494 acetoin utilization protein AcuB; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Acetoin utilization protein AcuB; L-ectoine synthase 874417..874809 Flexistipes sinusarabici DSM 4947 10815124 YP_004603061.1 CDS Flexsi_0827 NC_015672.1 874982 875602 R PFAM: CBS domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase IS116/IS110/IS902 family protein; putative signal transduction protein with CBS domains complement(874982..875602) Flexistipes sinusarabici DSM 4947 10815125 YP_004603062.1 CDS Flexsi_0828 NC_015672.1 876148 877161 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107; KEGG: dap:Dacet_1530 integrase family protein; PFAM: Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 2; transposase IS116/IS110/IS902 family protein 876148..877161 Flexistipes sinusarabici DSM 4947 10815126 YP_004603063.1 CDS Flexsi_0829 NC_015672.1 877513 878043 D PFAM: Phage integrase, N-terminal SAM-like domain; KEGG: fpl:Ferp_2539 hypothetical protein; SPTR: Putative uncharacterized protein; integrase domain-containing protein SAM domain-containing protein 877513..878043 Flexistipes sinusarabici DSM 4947 10815127 YP_004603064.1 CDS Flexsi_0830 NC_015672.1 877997 878368 R KEGG: mfs:MFS40622_1358 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(877997..878368) Flexistipes sinusarabici DSM 4947 10815128 YP_004603065.1 CDS Flexsi_0831 NC_015672.1 878343 878609 R manually curated; hypothetical protein complement(878343..878609) Flexistipes sinusarabici DSM 4947 10815129 YP_004603066.1 CDS Flexsi_0833 NC_015672.1 880365 881051 D PFAM: IstB-like ATP binding protein; manually curated; IstB domain-containing protein ATP-binding protein 880365..881051 Flexistipes sinusarabici DSM 4947 10815131 YP_004603067.1 CDS Flexsi_0835 NC_015672.1 882587 882955 R KEGG: sun:SUN_1976 transposase; SPTR: Transposase, IS4 family protein; hypothetical protein complement(882587..882955) Flexistipes sinusarabici DSM 4947 10815133 YP_004603068.1 CDS Flexsi_0836 NC_015672.1 883173 883505 R KEGG: pop:POPTR_597343 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(883173..883505) Flexistipes sinusarabici DSM 4947 10815134 YP_004603069.1 CDS Flexsi_0837 NC_015672.1 883776 884495 R hypothetical protein complement(883776..884495) Flexistipes sinusarabici DSM 4947 10815135 YP_004603070.1 CDS Flexsi_0838 NC_015672.1 884800 885129 D COGs: COG3031 Type II secretory pathway component PulC; KEGG: dap:Dacet_0489 type II secretory pathway component PulC-like protein; SPTR: Type II secretory pathway component PulC-like protein; hypothetical protein 884800..885129 Flexistipes sinusarabici DSM 4947 10815136 YP_004603071.1 CDS Flexsi_0839 NC_015672.1 885270 886145 D TIGRFAM: general secretion pathway protein C; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR005644:IPR004846:IPR013356; KEGG: ddf:DEFDS_1308 general secretion pathway protein D; PFAM: Type II/III secretion system; NolW-like; SPTR: General secretion pathway protein D; TIGRFAM: Type II secretion system gspD; hypothetical protein 885270..886145 Flexistipes sinusarabici DSM 4947 10815137 YP_004603072.1 CDS Flexsi_0840 NC_015672.1 886620 888473 D PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593; KEGG: ddf:DEFDS_1307 general secretion pathway protein E; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: General secretion pathway protein E; general secretion pathway protein D 886620..888473 Flexistipes sinusarabici DSM 4947 10815138 YP_004603073.1 CDS Flexsi_0841 NC_015672.1 888473 889927 D PFAM: Type II/IV secretion system protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: dap:Dacet_0492 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; type II secretion system protein E 888473..889927 Flexistipes sinusarabici DSM 4947 10815139 YP_004603074.1 CDS Flexsi_0842 NC_015672.1 889927 891123 D PFAM: Bacterial type II secretion system protein F domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase IS116/IS110/IS902 family protein; type II secretion system F domain-containing protein 889927..891123 Flexistipes sinusarabici DSM 4947 10815140 YP_004603075.1 CDS Flexsi_0843 NC_015672.1 891315 892328 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: pmx:PERMA_1157 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; transposase IS116/IS110/IS902 family protein complement(891315..892328) Flexistipes sinusarabici DSM 4947 10815141 YP_004603076.1 CDS Flexsi_0844 NC_015672.1 892699 893352 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; InterPro IPR003594; KEGG: cni:Calni_1201 hypothetical protein; PFAM: ATP-binding region, ATPase-like; SPTR: Putative uncharacterized protein; winged helix family two component transcriptional regulator 892699..893352 Flexistipes sinusarabici DSM 4947 10815142 YP_004603077.1 CDS Flexsi_0845 NC_015672.1 893656 894900 D ATP-binding protein 893656..894900 Flexistipes sinusarabici DSM 4947 10815143 YP_004603078.1 CDS Flexsi_0846 NC_015672.1 894969 895268 D COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; KEGG: sul:SYO3AOP1_1017 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; SPTR: Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; hypothetical protein 894969..895268 Flexistipes sinusarabici DSM 4947 10815144 YP_004603079.1 CDS Flexsi_0847 NC_015672.1 895270 899193 D InterPro IPR012902; Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 895270..899193 Flexistipes sinusarabici DSM 4947 10815145 YP_004603080.1 CDS Flexsi_0848 NC_015672.1 899197 899670 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; hypothetical protein 899197..899670 Flexistipes sinusarabici DSM 4947 10815146 YP_004603081.1 CDS Flexsi_0849 NC_015672.1 899660 900046 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: tye:THEYE_A0596 prepilin-type N-terminal cleavage/methylation domain protein; SPTR: Prepilin-type N-terminal cleavage/methylation domain protein; hypothetical protein 899660..900046 Flexistipes sinusarabici DSM 4947 10815147 YP_004603082.1 CDS Flexsi_0850 NC_015672.1 900099 900923 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; KEGG: geo:Geob_3073 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 900099..900923 Flexistipes sinusarabici DSM 4947 10815148 YP_004603083.1 CDS Flexsi_0851 NC_015672.1 900878 901480 D hypothetical protein 900878..901480 Flexistipes sinusarabici DSM 4947 10815149 YP_004603084.1 CDS Flexsi_0852 NC_015672.1 901736 901933 D COGs: COG1484 DNA replication protein; InterPro IPR002611:IPR003593; KEGG: sfu:Sfum_2832 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; hypothetical protein 901736..901933 Flexistipes sinusarabici DSM 4947 10815150 YP_004603085.1 CDS Flexsi_0853 NC_015672.1 901956 902768 R PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: mac:MA2579 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase, IS21; IstB domain-containing protein ATP-binding protein complement(901956..902768) Flexistipes sinusarabici DSM 4947 10815151 YP_004603086.1 CDS Flexsi_0854 NC_015672.1 902765 904009 R PFAM: Integrase core domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; integrase catalytic subunit complement(902765..904009) Flexistipes sinusarabici DSM 4947 10815152 YP_004603087.1 CDS Flexsi_0855 NC_015672.1 904148 905017 D PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR001387; KEGG: glo:Glov_3687 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; transposase IS4 family protein 904148..905017 Flexistipes sinusarabici DSM 4947 10815153 YP_004603088.1 CDS Flexsi_0856 NC_015672.1 905332 905577 R PFAM: Helix-turn-helix; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: hya:HY04AAS1_1299 HipA domain protein; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; SPTR: HipA domain protein; helix-turn-helix domain-containing protein complement(905332..905577) Flexistipes sinusarabici DSM 4947 10815154 YP_004603089.1 CDS Flexsi_0857 NC_015672.1 905555 906775 R PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: dap:Dacet_1179 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; HipA domain-containing protein complement(905555..906775) Flexistipes sinusarabici DSM 4947 10815155 YP_004603090.1 CDS Flexsi_0858 NC_015672.1 906969 907427 R PFAM: MarR family; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: ddf:DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+); PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP+); MarR family transcriptional regulator complement(906969..907427) Flexistipes sinusarabici DSM 4947 10815156 YP_004603091.1 CDS Flexsi_0859 NC_015672.1 907688 909988 R PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: cni:Calni_0968 integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 1; malate dehydrogenase complement(907688..909988) Flexistipes sinusarabici DSM 4947 10815157 YP_004603092.1 CDS Flexsi_0860 NC_015672.1 910870 911766 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR001667:IPR000644:IPR002646; KEGG: cni:Calni_0967 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; Cystathionine beta-synthase, core; Phosphoesterase, RecJ-like; SMART: Cystathionine beta-synthase, core; SPTR: Polynucleotide adenylyltransferase region; Tyrosine recombinase xerC 910870..911766 Flexistipes sinusarabici DSM 4947 10815158 YP_004603093.1 CDS Flexsi_0861 NC_015672.1 911766 914411 D PFAM: DHH family; CBS domain; Poly A polymerase head domain; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR018111:IPR003714; KEGG: ddf:DEFDS_1078 phosphate starvation-induced protein PhoH; PFAM: PhoH-like protein; K Homology, type 1, subgroup; SPTR: Phosphate starvation-induced protein PhoH; polynucleotide adenylyltransferase 911766..914411 Flexistipes sinusarabici DSM 4947 10815159 YP_004603094.1 CDS Flexsi_0862 NC_015672.1 914404 915381 D PFAM: KH domain; PhoH-like protein; COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054; InterPro IPR002036; KEGG: ddf:DEFDS_1079 hypothetical protein; PFAM: Uncharacterised protein family UPF0054; SPTR: Probable rRNA maturation factor; TIGRFAM: Uncharacterised protein family UPF0054; PhoH family protein 914404..915381 Flexistipes sinusarabici DSM 4947 10815160 YP_004603095.1 CDS Flexsi_0863 NC_015672.1 915371 915829 D PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829:IPR000326; KEGG: cni:Calni_0964 diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Diacylglycerol kinase; metalloprotease ybeY 915371..915829 Flexistipes sinusarabici DSM 4947 10815161 YP_004603096.1 CDS Flexsi_0864 NC_015672.1 915956 916657 D PFAM: Prokaryotic diacylglycerol kinase; PAP2 superfamily; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: ddf:DEFDS_1081 magnesium/cobalt efflux protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core; SPTR: Magnesium/cobalt efflux protein; diacylglycerol kinase 915956..916657 Flexistipes sinusarabici DSM 4947 10815162 YP_004603097.1 CDS Flexsi_0865 NC_015672.1 916667 917962 D PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR002917:IPR004044:IPR005662:IPR005225; KEGG: ddf:DEFDS_1082 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; hypothetical protein 916667..917962 Flexistipes sinusarabici DSM 4947 10815163 YP_004603098.1 CDS Flexsi_0866 NC_015672.1 917946 918830 D PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; KEGG: ddf:DEFDS_1084 hypothetical protein; SPTR: Putative uncharacterized protein; GTP-binding protein Era-like-protein 917946..918830 Flexistipes sinusarabici DSM 4947 10815164 YP_004603099.1 CDS Flexsi_0867 NC_015672.1 918837 919535 D PFAM: Recombination protein O N terminal; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ddf:DEFDS_1464 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 918837..919535 Flexistipes sinusarabici DSM 4947 10815165 YP_004603100.1 CDS Flexsi_0868 NC_015672.1 919545 920441 D PFAM: Metallo-beta-lactamase superfamily; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 919545..920441 Flexistipes sinusarabici DSM 4947 10815166 YP_004603101.1 CDS Flexsi_0869 NC_015672.1 920567 921934 R PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(920567..921934) Flexistipes sinusarabici DSM 4947 10815167 YP_004603102.1 CDS Flexsi_0872 NC_015672.1 924763 925245 D PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: gym:GYMC10_0864 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; membrane protein AbrB 924763..925245 Flexistipes sinusarabici DSM 4947 10815170 YP_004603103.1 CDS Flexsi_0873 NC_015672.1 925258 925995 D PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR013767:IPR003594:IPR000014; KEGG: bld:BLi01245 hypothetical protein; PFAM: ATP-binding region, ATPase-like; PAS fold; SMART: ATP-binding region, ATPase-like; PAS; SPTR: Putative uncharacterized protein; IclR family transcriptional regulator 925258..925995 Flexistipes sinusarabici DSM 4947 10815171 YP_004603104.1 CDS Flexsi_0874 NC_015672.1 926022 927605 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789; KEGG: dap:Dacet_1391 response regulator receiver and unknown domain protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; signal transduction histidine kinase regulating citrate/malate metabolism 926022..927605 Flexistipes sinusarabici DSM 4947 10815172 YP_004603105.1 CDS Flexsi_0875 NC_015672.1 927619 928302 D PFAM: Response regulator receiver domain; Transcriptional regulator; COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: ppr:PBPRA2754 putative tricarboxylic transport TctC; SPTR: Putative tricarboxylic transport TctC; response regulator receiver and unknown domain-containing protein 927619..928302 Flexistipes sinusarabici DSM 4947 10815173 YP_004603106.1 CDS Flexsi_0876 NC_015672.1 928518 929504 D PFAM: Tripartite tricarboxylate transporter family receptor; KEGG: tricarboxylate transport protein TctB; SPTR: Putative uncharacterized protein; putative tricarboxylic transport TctC 928518..929504 Flexistipes sinusarabici DSM 4947 10815174 YP_004603107.1 CDS Flexsi_0877 NC_015672.1 929580 930065 D COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: abu:Abu_0100 putative tricarboxylic transport protein TctA; PFAM: Protein of unknown function DUF112, transmembrane; SPTR: Putative tricarboxylic transport TctA; tricarboxylate transport protein TctB 929580..930065 Flexistipes sinusarabici DSM 4947 10815175 YP_004603108.1 CDS Flexsi_0878 NC_015672.1 930062 931585 D PFAM: Tripartite tricarboxylate transporter TctA family; COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005793; KEGG: dap:Dacet_2496 formyl transferase domain protein; PFAM: Formyl transferase, C-terminal; SPTR: Formyl transferase domain protein; hypothetical protein 930062..931585 Flexistipes sinusarabici DSM 4947 10815176 YP_004603109.1 CDS Flexsi_0879 NC_015672.1 931590 932462 R PFAM: Formyl transferase; Formyl transferase, C-terminal domain; COGs: COG4907 membrane protein; InterPro IPR018702; KEGG: ddf:DEFDS_1130 hypothetical protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: Putative uncharacterized protein; formyl transferase domain-containing protein complement(931590..932462) Flexistipes sinusarabici DSM 4947 10815177 YP_004603110.1 CDS Flexsi_0880 NC_015672.1 932456 934171 R PFAM: Predicted membrane protein (DUF2207); COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: ddf:DEFDS_1131 hypothetical protein; PFAM: LemA; SPTR: Putative uncharacterized protein; hypothetical protein complement(932456..934171) Flexistipes sinusarabici DSM 4947 10815178 YP_004603111.1 CDS Flexsi_0881 NC_015672.1 934168 934728 R PFAM: LemA family; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: ddf:DEFDS_1132 hypothetical protein; SPTR: Putative uncharacterized protein; LemA family protein complement(934168..934728) Flexistipes sinusarabici DSM 4947 10815179 YP_004603112.1 CDS Flexsi_0882 NC_015672.1 934786 935532 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752:IPR002880; KEGG: tba:TERMP_00347 2-oxoglutarate oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoacid:ferredoxin oxidoreductase, subunit alpha; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; hypothetical protein 934786..935532 Flexistipes sinusarabici DSM 4947 10815180 YP_004603113.1 CDS Flexsi_0883 NC_015672.1 935545 937239 D PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766:IPR011896; KEGG: pfu:PF0753 2-oxoacid ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: 2-keto acid:ferredoxin oxidoreductase subunit beta; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate; 2-oxoacid:acceptor oxidoreductase subunit alpha 935545..937239 Flexistipes sinusarabici DSM 4947 10815181 YP_004603114.1 CDS Flexsi_0884 NC_015672.1 937239 938114 D PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: dap:Dacet_1247 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Acetate--CoA ligase; SPTR: AMP-dependent synthetase and ligase; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 937239..938114 Flexistipes sinusarabici DSM 4947 10815182 YP_004603115.1 CDS Flexsi_0885 NC_015672.1 938629 940509 D PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: cni:Calni_0864 cbs domain containing membrane protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing membrane protein; acetate--CoA ligase 938629..940509 Flexistipes sinusarabici DSM 4947 10815183 YP_004603116.1 CDS Flexsi_0886 NC_015672.1 940780 941202 D PFAM: CBS domain; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: ddf:DEFDS_0852 hypothetical protein; PFAM: Protein of unknown function DUF169; SPTR: Putative uncharacterized protein; hypothetical protein 940780..941202 Flexistipes sinusarabici DSM 4947 10815184 YP_004603117.1 CDS Flexsi_0887 NC_015672.1 941204 941953 D PFAM: Uncharacterised ArCR, COG2043; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase; InterPro IPR004365:IPR004364:IPR002313; KEGG: ddf:DEFDS_1155 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; hypothetical protein 941204..941953 Flexistipes sinusarabici DSM 4947 10815185 YP_004603118.1 CDS Flexsi_0888 NC_015672.1 942079 943551 R PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: cni:Calni_0361 phosphodiesterase, mj0936 family; PFAM: Metallophosphoesterase; SPTR: Phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; Lysyl-tRNA synthetase complement(942079..943551) Flexistipes sinusarabici DSM 4947 10815186 YP_004603119.1 CDS Flexsi_0889 NC_015672.1 943683 944156 D TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: cni:Calni_0362 rod shape-determining protein MreB; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; phosphodiesterase 943683..944156 Flexistipes sinusarabici DSM 4947 10815187 YP_004603120.1 CDS Flexsi_0890 NC_015672.1 944304 945329 D PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221:IPR005223; KEGG: ddf:DEFDS_1159 cell shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Cell shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; MreB/Mrl family cell shape determining protein 944304..945329 Flexistipes sinusarabici DSM 4947 10815188 YP_004603121.1 CDS Flexsi_0891 NC_015672.1 945329 946126 D PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; KEGG: dap:Dacet_1266 hypothetical protein; SPTR: Putative uncharacterized protein; rod shape-determining protein MreC 945329..946126 Flexistipes sinusarabici DSM 4947 10815189 YP_004603122.1 CDS Flexsi_0892 NC_015672.1 946116 946580 D COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR017790; KEGG: ddf:DEFDS_1161 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; TIGRFAM: Penicillin-binding protein 2; hypothetical protein 946116..946580 Flexistipes sinusarabici DSM 4947 10815190 YP_004603123.1 CDS Flexsi_0893 NC_015672.1 946561 948375 D PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR011923; KEGG: dap:Dacet_1268 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; penicillin-binding protein 2 946561..948375 Flexistipes sinusarabici DSM 4947 10815191 YP_004603124.1 CDS Flexsi_0894 NC_015672.1 948362 949477 D PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR018768:IPR006638; KEGG: ddf:DEFDS_1163 Fe-S oxidoreductases family protein; PFAM: Radical SAM; Protein of unknown function DUF2344; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductases family protein; rod shape-determining protein RodA 948362..949477 Flexistipes sinusarabici DSM 4947 10815192 YP_004603125.1 CDS Flexsi_0895 NC_015672.1 949494 951911 D PFAM: Uncharacterized protein conserved in bacteria (DUF2344); Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; radical SAM-linked protein; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ddf:DEFDS_1164 ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; radical SAM protein 949494..951911 Flexistipes sinusarabici DSM 4947 10815193 YP_004603126.1 CDS Flexsi_0896 NC_015672.1 951904 952317 D PFAM: Ferric uptake regulator family; InterPro IPR014127; KEGG: cni:Calni_0369 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; Fur family ferric uptake regulator 951904..952317 Flexistipes sinusarabici DSM 4947 10815194 YP_004603127.1 CDS Flexsi_0897 NC_015672.1 952283 953128 D PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: ddf:DEFDS_1167 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; hypothetical protein 952283..953128 Flexistipes sinusarabici DSM 4947 10815195 YP_004603128.1 CDS Flexsi_0898 NC_015672.1 953179 953496 D PFAM: Thioredoxin; TIGRFAM: thioredoxin; InterPro IPR013429; KEGG: ddf:DEFDS_1168 hypothetical protein; PFAM: Regulatory protein, FmdB, putative; SPTR: Putative uncharacterized protein; TIGRFAM: Regulatory protein, FmdB, putative; thioredoxin 953179..953496 Flexistipes sinusarabici DSM 4947 10815196 YP_004603129.1 CDS Flexsi_0899 NC_015672.1 953515 953706 D PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dap:Dacet_1449 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; FmdB family regulatory protein 953515..953706 Flexistipes sinusarabici DSM 4947 10815197 YP_004603130.1 CDS Flexsi_0900 NC_015672.1 953791 954072 R PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: cni:Calni_1205 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; histone family protein DNA-binding protein complement(953791..954072) Flexistipes sinusarabici DSM 4947 10815198 YP_004603131.1 CDS Flexsi_0901 NC_015672.1 954187 955665 D PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: ddf:DEFDS_1421 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; integral membrane protein MviN 954187..955665 Flexistipes sinusarabici DSM 4947 10815199 YP_004603132.1 CDS Flexsi_0902 NC_015672.1 955662 956108 D PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ddf:DEFDS_1420 metallo-beta-lactamase family protein; SPTR: Metallo-beta-lactamase family protein; D-tyrosyl-tRNA(Tyr) deacylase 955662..956108 Flexistipes sinusarabici DSM 4947 10815200 YP_004603133.1 CDS Flexsi_0903 NC_015672.1 956130 956750 D PFAM: Metallo-beta-lactamase superfamily; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: ddf:DEFDS_0971 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; metallo-beta-lactamase family protein 956130..956750 Flexistipes sinusarabici DSM 4947 10815201 YP_004603134.1 CDS Flexsi_0904 NC_015672.1 956781 957206 R PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); HAMAP: Endonuclease V; InterPro IPR007581; KEGG: ddf:DEFDS_0855 deoxyribonuclease V; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: Endonuclease V; FKBP-type peptidylprolyl isomerase complement(956781..957206) Flexistipes sinusarabici DSM 4947 10815202 YP_004603135.1 CDS Flexsi_0905 NC_015672.1 957604 958248 R PFAM: Endonuclease V; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ddf:DEFDS_1259 patatin-like phospholipase family protein; PFAM: Patatin; SPTR: Patatin-like phospholipase family protein; endonuclease V complement(957604..958248) Flexistipes sinusarabici DSM 4947 10815203 YP_004603136.1 CDS Flexsi_0906 NC_015672.1 958461 959354 D PFAM: Patatin-like phospholipase; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: ddf:DEFDS_1258 hypothetical protein; PFAM: BioY protein; SPTR: Putative uncharacterized protein; patatin 958461..959354 Flexistipes sinusarabici DSM 4947 10815204 YP_004603137.1 CDS Flexsi_0907 NC_015672.1 959344 959883 D PFAM: BioY family; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: ddf:DEFDS_1369 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase; BioY protein 959344..959883 Flexistipes sinusarabici DSM 4947 10815205 YP_004603138.1 CDS Flexsi_0908 NC_015672.1 960034 960651 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ddf:DEFDS_0995 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; haloacid dehalogenase domain-containing protein hydrolase complement(960034..960651) Flexistipes sinusarabici DSM 4947 10815206 YP_004603139.1 CDS Flexsi_0909 NC_015672.1 961157 962731 D PFAM: Radical SAM superfamily; COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: cni:Calni_1099 hypothetical protein; PFAM: Multi-copper polyphenol oxidoreductase, laccase; SPTR: Putative uncharacterized protein; radical SAM protein 961157..962731 Flexistipes sinusarabici DSM 4947 10815207 YP_004603140.1 CDS Flexsi_0910 NC_015672.1 962707 963420 D PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608:IPR011078; KEGG: ddf:DEFDS_0997 hypothetical protein; PFAM: Alanine racemase, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; multi-copper polyphenol oxidoreductase, laccase 962707..963420 Flexistipes sinusarabici DSM 4947 10815208 YP_004603141.1 CDS Flexsi_0911 NC_015672.1 963417 964121 D PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; InterPro IPR003425; KEGG: ddf:DEFDS_0998 hypothetical protein; PFAM: Protein of unknown function YGGT; SPTR: Putative uncharacterized protein; hypothetical protein 963417..964121 Flexistipes sinusarabici DSM 4947 10815209 YP_004603142.1 CDS Flexsi_0912 NC_015672.1 964129 964947 D PFAM: YGGT family; COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR002716:IPR002792:IPR006596; KEGG: ddf:DEFDS_1000 hypothetical protein; PFAM: PilT protein, N-terminal; Deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein, PINc; SPTR: Putative uncharacterized protein; hypothetical protein 964129..964947 Flexistipes sinusarabici DSM 4947 10815210 YP_004603143.1 CDS Flexsi_0913 NC_015672.1 965084 966049 D PFAM: TRAM domain; PIN domain; COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro IPR001228; KEGG: ddf:DEFDS_1001 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PRIAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PilT protein domain-containing protein 965084..966049 Flexistipes sinusarabici DSM 4947 10815211 YP_004603144.1 CDS Flexsi_0914 NC_015672.1 966054 966740 D PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; manually curated; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 966054..966740 Flexistipes sinusarabici DSM 4947 10815212 YP_004603145.1 CDS Flexsi_0916 NC_015672.1 967399 968367 R PFAM: 2-nitropropane dioxygenase; KEGG: sun:SUN_1976 transposase; SPTR: Transposase, IS4 family protein; 2-nitropropane dioxygenase complement(967399..968367) Flexistipes sinusarabici DSM 4947 10815214 YP_004603146.1 CDS Flexsi_0917 NC_015672.1 968643 968975 R COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein complement(968643..968975) Flexistipes sinusarabici DSM 4947 10815215 YP_004603147.1 CDS Flexsi_0918 NC_015672.1 969164 970999 R PFAM: Transposase DDE domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; transposase IS4 family protein complement(969164..970999) Flexistipes sinusarabici DSM 4947 10815216 YP_004603148.1 CDS Flexsi_0919 NC_015672.1 971388 972401 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: dap:Dacet_2046 NmrA family protein; SPTR: NmrA family protein; transposase IS116/IS110/IS902 family protein complement(971388..972401) Flexistipes sinusarabici DSM 4947 10815217 YP_004603149.1 CDS Flexsi_0920 NC_015672.1 972997 974427 D PFAM: Protein of unknown function (DUF2867); NmrA-like family; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: has:Halsa_0198 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; NmrA family protein 972997..974427 Flexistipes sinusarabici DSM 4947 10815218 YP_004603150.1 CDS Flexsi_0921 NC_015672.1 974435 975367 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG5012 cobalamin binding protein; InterPro IPR006158; KEGG: dal:Dalk_1842 cobalamin B12-binding; PFAM: Cobalamin (vitamin B12)-binding; SPTR: Cobalamin B12-binding; diguanylate cyclase complement(974435..975367) Flexistipes sinusarabici DSM 4947 10815219 YP_004603151.1 CDS Flexsi_0922 NC_015672.1 975364 976011 R PFAM: B12 binding domain; KEGG: dal:Dalk_1840 hypothetical protein; SPTR: Putative uncharacterized protein; cobalamin B12-binding domain-containing protein complement(975364..976011) Flexistipes sinusarabici DSM 4947 10815220 YP_004603152.1 CDS Flexsi_0923 NC_015672.1 976226 976669 R COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003348; KEGG: kcr:Kcr_0220 arsenite-transporting ATPase; PFAM: ATPase, anion-transporting; PRIAM: Arsenite-transporting ATPase; SPTR: Arsenite-transporting ATPase; hypothetical protein complement(976226..976669) Flexistipes sinusarabici DSM 4947 10815221 YP_004603153.1 CDS Flexsi_0924 NC_015672.1 976765 977676 R PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; KEGG: cni:Calni_0016 hypothetical protein; SPTR: Putative uncharacterized protein; arsenite-transporting ATPase complement(976765..977676) Flexistipes sinusarabici DSM 4947 10815222 YP_004603154.1 CDS Flexsi_0925 NC_015672.1 977815 978126 D COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: sfr:Sfri_1402 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 1; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; hypothetical protein 977815..978126 Flexistipes sinusarabici DSM 4947 10815223 YP_004603155.1 CDS Flexsi_0926 NC_015672.1 978263 978853 D PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; peptide methionine sulfoxide reductase MsrA 978263..978853 Flexistipes sinusarabici DSM 4947 10815224 YP_004603156.1 CDS Flexsi_0927 NC_015672.1 979190 980557 D PFAM: Transposase domain (DUF772); COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: hor:Hore_20910 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter; transposase IS4 family protein 979190..980557 Flexistipes sinusarabici DSM 4947 10815225 YP_004603157.1 CDS Flexsi_0928 NC_015672.1 980688 982007 R PFAM: Sodium:neurotransmitter symporter family; KEGG: cni:Calni_0609 hypothetical protein; SPTR: Putative uncharacterized protein; sodium:neurotransmitter symporter complement(980688..982007) Flexistipes sinusarabici DSM 4947 10815226 YP_004603158.1 CDS Flexsi_0929 NC_015672.1 982431 983393 R PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); COGs: COG3096 conserved hypothetical protein involved in chromosome partitioning; KEGG: cni:Calni_0610 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(982431..983393) Flexistipes sinusarabici DSM 4947 10815227 YP_004603159.1 CDS Flexsi_0930 NC_015672.1 983386 986931 R PFAM: MukB N-terminal; KEGG: cni:Calni_0611 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(983386..986931) Flexistipes sinusarabici DSM 4947 10815228 YP_004603160.1 CDS Flexsi_0931 NC_015672.1 986922 987611 R KEGG: cni:Calni_0612 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(986922..987611) Flexistipes sinusarabici DSM 4947 10815229 YP_004603161.1 CDS Flexsi_0932 NC_015672.1 987589 988872 R manually curated; hypothetical protein complement(987589..988872) Flexistipes sinusarabici DSM 4947 10815230 YP_004603162.1 CDS Flexsi_0934 NC_015672.1 990459 992414 D COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: dat:HRM2_39560 HTH-type transcriptional regulator (MArR family protein); PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: HTH-type transcriptional regulator (MArR family protein); hypothetical protein 990459..992414 Flexistipes sinusarabici DSM 4947 10815232 YP_004603163.1 CDS Flexsi_0935 NC_015672.1 993070 993504 D PFAM: MarR family; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: gsu:GSU2588 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; MarR family transcriptional regulator 993070..993504 Flexistipes sinusarabici DSM 4947 10815233 YP_004603164.1 CDS Flexsi_0936 NC_015672.1 993508 994872 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR000795:IPR004161:IPR004548:IPR005225; KEGG: gvi:glr3159 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Strongly similar to translation releasing factor RF-3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; dihydrolipoyl dehydrogenase 993508..994872 Flexistipes sinusarabici DSM 4947 10815234 YP_004603165.1 CDS Flexsi_0937 NC_015672.1 994972 996579 R PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; KEGG: tau:Tola_1477 hypothetical protein; SPTR: Putative uncharacterized protein; peptide chain release factor 3 complement(994972..996579) Flexistipes sinusarabici DSM 4947 10815235 YP_004603166.1 CDS Flexsi_0938 NC_015672.1 996728 997441 R COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: dsa:Desal_3552 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; hypothetical protein complement(996728..997441) Flexistipes sinusarabici DSM 4947 10815236 YP_004603167.1 CDS Flexsi_0939 NC_015672.1 997774 998775 D PFAM: Bacterial extracellular solute-binding protein; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: dsa:Desal_3553 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; family 1 extracellular solute-binding protein 997774..998775 Flexistipes sinusarabici DSM 4947 10815237 YP_004603168.1 CDS Flexsi_0940 NC_015672.1 998815 1000383 D PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: dsa:Desal_3554 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; ABC transporter 998815..1000383 Flexistipes sinusarabici DSM 4947 10815238 YP_004603169.1 CDS Flexsi_0941 NC_015672.1 1000364 1001401 D PFAM: ABC transporter; TOBE domain; manually curated; Fe(3+)-transporting ATPase 1000364..1001401 Flexistipes sinusarabici DSM 4947 10815239 YP_004603170.1 CDS Flexsi_0943 NC_015672.1 1001713 1002303 R PFAM: Aminotransferase class IV; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: ddf:DEFDS_1304 para-aminobenzoate synthase component I; PFAM: Chorismate binding, C-terminal; PRIAM: Anthranilate synthase; SPTR: Para-aminobenzoate synthase component I; 4-amino-4-deoxychorismate lyase complement(1001713..1002303) Flexistipes sinusarabici DSM 4947 10815241 YP_004603171.1 CDS Flexsi_0944 NC_015672.1 1002287 1003297 R PFAM: chorismate binding enzyme; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: oih:OB0691 betaine-homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; PRIAM: Betaine--homocysteine S-methyltransferase; SPTR: Betaine-homocysteine methyltransferase; anthranilate synthase complement(1002287..1003297) Flexistipes sinusarabici DSM 4947 10815242 YP_004603172.1 CDS Flexsi_0945 NC_015672.1 1003414 1004460 R PFAM: Homocysteine S-methyltransferase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; betaine--homocysteine S-methyltransferase complement(1003414..1004460) Flexistipes sinusarabici DSM 4947 10815243 YP_004603173.1 CDS Flexsi_0946 NC_015672.1 1004905 1006218 D PFAM: Transposase DDE domain; InterPro IPR011579:IPR004256; KEGG: mtt:Ftrac_2201 duf234 dexx-box atpase; SPTR: DUF234 DEXX-box ATPase; transposase IS4 family protein 1004905..1006218 Flexistipes sinusarabici DSM 4947 10815244 YP_004603174.1 CDS Flexsi_0947 NC_015672.1 1006635 1007945 R PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; InterPro IPR011462; KEGG: caa:Caka_2052 protein of unknown function DUF1568; SPTR: Putative uncharacterized protein; duf234 dexx-box atpase complement(1006635..1007945) Flexistipes sinusarabici DSM 4947 10815245 YP_004603175.1 CDS Flexsi_0948 NC_015672.1 1008127 1009011 R PFAM: Transposase IS200 like; InterPro IPR004919:IPR018651; KEGG: hmo:HM1_2923 hypothetical protein; PFAM: Protein of unknown function DUF262; Protein of unknown function DUF2081; SPTR: Putative uncharacterized protein; hypothetical protein complement(1008127..1009011) Flexistipes sinusarabici DSM 4947 10815246 YP_004603176.1 CDS Flexsi_0949 NC_015672.1 1009417 1011162 R PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262; Protein of unknown function (DUF1524); COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: tpt:Tpet_1081 CRISPR-associated Cas2 family protein; SPTR: CRISPR-associated protein, Cas2 family; TIGRFAM: Protein of unknown function DUF196; hypothetical protein complement(1009417..1011162) Flexistipes sinusarabici DSM 4947 10815247 YP_004603177.1 CDS Flexsi_0950 NC_015672.1 1014455 1014736 R PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019858; KEGG: brm:Bmur_1230 CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1; CRISPR-associated protein Cas2 complement(1014455..1014736) Flexistipes sinusarabici DSM 4947 10815248 YP_004603178.1 CDS Flexsi_0951 NC_015672.1 1014740 1015729 R PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP; CRISPR-associated endonuclease Cas1; COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: cli:Clim_0447 CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; SPTR: CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas1 complement(1014740..1015729) Flexistipes sinusarabici DSM 4947 10815249 YP_004603179.1 CDS Flexsi_0952 NC_015672.1 1015733 1016227 R PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; COGs: COG1203 helicase; InterPro IPR014001:IPR001650:IPR006483:IPR006474; KEGG: tye:THEYE_A2039 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: CRISPR-associated helicase Cas3; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; CRISPR-associated protein Cas4 complement(1015733..1016227) Flexistipes sinusarabici DSM 4947 10815250 YP_004603180.1 CDS Flexsi_0953 NC_015672.1 1016231 1018372 R PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; InterPro IPR007552:IPR013422; KEGG: tye:THEYE_A2040 CRISPR-associated protein Cas5; SPTR: CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; CRISPR-associated helicase Cas3 complement(1016231..1018372) Flexistipes sinusarabici DSM 4947 10815251 YP_004603181.1 CDS Flexsi_0954 NC_015672.1 1018375 1019094 R PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: tye:THEYE_A2041 CRISPR-associated regulatory protein, DevR family; SPTR: CRISPR-associated regulatory protein, DevR family; TIGRFAM: CRISPR-associated regulatory DevR; CRISPR-associated negative autoregulator; CRISPR-associated protein Cas5 complement(1018375..1019094) Flexistipes sinusarabici DSM 4947 10815252 YP_004603182.1 CDS Flexsi_0955 NC_015672.1 1019091 1020026 R PFAM: CRISPR-associated negative autoregulator DevR/Csa2; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP; InterPro IPR010180; KEGG: tye:THEYE_A2042 CRISPR-associated CXXC_CXXC protein Cst1; SPTR: CRISPR-associated CXXC_CXXC protein Cst1; TIGRFAM: CRISPR-associated protein, CXXC-CXXC; DevR family CRISPR-associated autoregulator complement(1019091..1020026) Flexistipes sinusarabici DSM 4947 10815253 YP_004603183.1 CDS Flexsi_0956 NC_015672.1 1020019 1021599 R PFAM: CRISPR-associated protein (Cas_CXXC_CXXC); TIGRFAM: CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743:IPR010156; KEGG: str:Sterm_1593 CRISPR-associated protein Cas6; PFAM: Protein of unknown function DUF57; SPTR: CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein, Cas6; CRISPR-associated protein complement(1020019..1021599) Flexistipes sinusarabici DSM 4947 10815254 YP_004603184.1 CDS Flexsi_0957 NC_015672.1 1021596 1022333 R PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: gur:Gura_1947 hydrogenase maturation protease; PFAM: Peptidase A31, hydrogen uptake protein; SPTR: Hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; CRISPR-associated protein Cas6 complement(1021596..1022333) Flexistipes sinusarabici DSM 4947 10815255 YP_004603185.1 CDS Flexsi_0958 NC_015672.1 1022628 1023116 R PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: gur:Gura_1946 nickel-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Nickel-dependent hydrogenase, large subunit; hydrogenase maturation protease complement(1022628..1023116) Flexistipes sinusarabici DSM 4947 10815256 YP_004603186.1 CDS Flexsi_0959 NC_015672.1 1023113 1024795 R PFAM: Nickel-dependent hydrogenase; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: glo:Glov_0146 putative hydrogenase 2 b cytochrome subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Polysulphide reductase NrfD; cytochrome-c3 hydrogenase complement(1023113..1024795) Flexistipes sinusarabici DSM 4947 10815257 YP_004603187.1 CDS Flexsi_0960 NC_015672.1 1024788 1025987 R PFAM: Polysulphide reductase, NrfD; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR006311; KEGG: gbm:Gbem_3138 hydrogenase 2 protein HybA; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Periplasmically oriented, membrane-bound [NiFe]-hydrogenase iron-sulfur cluster-binding subunit; polysulfide reductase NrfD complement(1024788..1025987) Flexistipes sinusarabici DSM 4947 10815258 YP_004603188.1 CDS Flexsi_0961 NC_015672.1 1025974 1026867 R COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR006311; KEGG: dap:Dacet_1223 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Hydrogenase (NiFe) small subunit HydA; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; 4Fe-4S ferredoxin complement(1025974..1026867) Flexistipes sinusarabici DSM 4947 10815259 YP_004603189.1 CDS Flexsi_0962 NC_015672.1 1026854 1027945 R PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); KEGG: dap:Dacet_1058 hypothetical protein; SPTR: Putative uncharacterized protein; hydrogenase (NiFe) small subunit HydA complement(1026854..1027945) Flexistipes sinusarabici DSM 4947 10815260 YP_004603190.1 CDS Flexsi_0963 NC_015672.1 1028255 1028566 R PFAM: ABC transporter substrate binding protein; Uncharacterized protein conserved in bacteria (DUF2325); COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR007831; KEGG: cni:Calni_1450 general secretory system II protein e domain protein; PFAM: General secretory system II, protein E, N-terminal; SPTR: General secretory system II protein E domain protein; hypothetical protein complement(1028255..1028566) Flexistipes sinusarabici DSM 4947 10815261 YP_004603191.1 CDS Flexsi_0964 NC_015672.1 1028775 1030325 D PFAM: GSPII_E N-terminal domain; COGs: COG1199 Rad3-related DNA helicase; InterPro IPR011545:IPR014001:IPR006555; KEGG: cni:Calni_1449 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; SPTR: DEAD/DEAH box helicase domain protein; general secretory system II protein E domain-containing protein 1028775..1030325 Flexistipes sinusarabici DSM 4947 10815262 YP_004603192.1 CDS Flexsi_0965 NC_015672.1 1030325 1032115 D PFAM: DEAD_2; DEAD/DEAH box helicase; COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: dap:Dacet_1293 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; DEAD/DEAH box helicase 1030325..1032115 Flexistipes sinusarabici DSM 4947 10815263 YP_004603193.1 CDS Flexsi_0966 NC_015672.1 1032102 1033463 D PFAM: Phosphoglucose isomerase; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: tRNA(Ile)-lysidine synthase; InterPro IPR011063:IPR012795:IPR012796; KEGG: ddf:DEFDS_1027 cell cycle protein MesJ; PFAM: PP-loop; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; glucose-6-phosphate isomerase 1032102..1033463 Flexistipes sinusarabici DSM 4947 10815264 YP_004603194.1 CDS Flexsi_0967 NC_015672.1 1033447 1034691 D PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836:IPR005904; KEGG: cni:Calni_1446 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine phosphoribosyltransferase; TIGRFAM: Hypoxanthine phosphoribosyl transferase; tRNA(Ile)-lysidine synthase 1033447..1034691 Flexistipes sinusarabici DSM 4947 10815265 YP_004603195.1 CDS Flexsi_0968 NC_015672.1 1034694 1035224 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0465 ATP-dependent Zn protease; InterProIPR011546:IPR003959:IPR000642:IPR003593:IPR 005936; KEGG: ddf:DEFDS_1029 cell division protein FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division protein FtsH; TIGRFAM: Peptidase M41, FtsH; hypoxanthine phosphoribosyltransferase 1034694..1035224 Flexistipes sinusarabici DSM 4947 10815266 YP_004603196.1 CDS Flexsi_0969 NC_015672.1 1035241 1037142 D PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489:IPR006390; KEGG: cni:Calni_1444 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; ATP-dependent metalloprotease FtsH 1035241..1037142 Flexistipes sinusarabici DSM 4947 10815267 YP_004603197.1 CDS Flexsi_0970 NC_015672.1 1037114 1038310 D PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG1624 conserved hypothetical protein; InterPro IPR003390:IPR014046; KEGG: ddf:DEFDS_1031 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; dihydropteroate synthase 1037114..1038310 Flexistipes sinusarabici DSM 4947 10815268 YP_004603198.1 CDS Flexsi_0971 NC_015672.1 1038303 1039088 D PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; InterPro IPR012505; KEGG: ddf:DEFDS_1032 hypothetical protein; PFAM: YbbR-like; SPTR: Putative uncharacterized protein; hypothetical protein 1038303..1039088 Flexistipes sinusarabici DSM 4947 10815269 YP_004603199.1 CDS Flexsi_0972 NC_015672.1 1039075 1039977 D PFAM: YbbR-like protein; COGs: COG1109 Phosphomannomutase; InterProIPR005844:IPR005845:IPR005846:IPR005843:IPR 006352; KEGG: ddf:DEFDS_1033 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphoglucosamine mutase; TIGRFAM: Phosphoglucosamine mutase; hypothetical protein 1039075..1039977 Flexistipes sinusarabici DSM 4947 10815270 YP_004603200.1 CDS Flexsi_0973 NC_015672.1 1039974 1041335 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: ddf:DEFDS_1034 pyridoxine 5-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; phosphoglucosamine mutase 1039974..1041335 Flexistipes sinusarabici DSM 4947 10815271 YP_004603201.1 CDS Flexsi_0974 NC_015672.1 1041335 1042054 D PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); HAMAP: Holo-[acyl-carrier-protein] synthase; InterPro IPR008278:IPR002582:IPR004568; KEGG: cni:Calni_1439 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Holo-[acyl-carrier-protein] synthase; TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; pyridoxine 5'-phosphate synthase 1041335..1042054 Flexistipes sinusarabici DSM 4947 10815272 YP_004603202.1 CDS Flexsi_0975 NC_015672.1 1042055 1042405 D PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528:IPR003329; KEGG: ddf:DEFDS_1036 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; Holo-(acyl-carrier-protein) synthase 1042055..1042405 Flexistipes sinusarabici DSM 4947 10815273 YP_004603203.1 CDS Flexsi_0976 NC_015672.1 1042402 1043130 D PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: ddf:DEFDS_1037 CTP synthase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; 3-deoxy-manno-octulosonate cytidylyltransferase 1042402..1043130 Flexistipes sinusarabici DSM 4947 10815274 YP_004603204.1 CDS Flexsi_0977 NC_015672.1 1043127 1044764 D PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218:IPR006269; KEGG: ddf:DEFDS_1038 3-deoxy-8-phosphooctulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: 3-deoxy-8-phosphooctulonate synthase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; CTP synthase 1043127..1044764 Flexistipes sinusarabici DSM 4947 10815275 YP_004603205.1 CDS Flexsi_0978 NC_015672.1 1044761 1045531 D PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR001347:IPR000644:IPR004800; KEGG: ddf:DEFDS_1039 arabinose-5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SMART: Cystathionine beta-synthase, core; SPTR: Arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ; 2-dehydro-3-deoxyphosphooctonate aldolase 1044761..1045531 Flexistipes sinusarabici DSM 4947 10815276 YP_004603206.1 CDS Flexsi_0979 NC_015672.1 1045528 1046490 D PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR005834:IPR010023:IPR006549; KEGG: ddf:DEFDS_1040 3-deoxy-manno-octulosonate-8-phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: 3-deoxy-manno-octulosonate-8-phosphatase; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KpsF/GutQ family protein 1045528..1046490 Flexistipes sinusarabici DSM 4947 10815277 YP_004603207.1 CDS Flexsi_0980 NC_015672.1 1046490 1046984 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; InterPro IPR010664; KEGG: ddf:DEFDS_1041 hypothetical protein; PFAM: Protein of unknown function DUF1239; SPTR: Putative uncharacterized protein; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1046490..1046984 Flexistipes sinusarabici DSM 4947 10815278 YP_004603208.1 CDS Flexsi_0981 NC_015672.1 1046954 1047499 D PFAM: Protein of unknown function (DUF1239); COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: cni:Calni_1432 OstA family protein; PFAM: OstA-like protein; SPTR: OstA family protein; hypothetical protein 1046954..1047499 Flexistipes sinusarabici DSM 4947 10815279 YP_004603209.1 CDS Flexsi_0982 NC_015672.1 1047489 1048013 D PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dap:Dacet_1308 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; OstA family protein 1047489..1048013 Flexistipes sinusarabici DSM 4947 10815280 YP_004603210.1 CDS Flexsi_0983 NC_015672.1 1047955 1048695 D PFAM: ABC transporter; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: ddf:DEFDS_1044 DNA-directed RNA polymerase sigma 54 factor; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: DNA-directed RNA polymerase sigma 54 factor; TIGRFAM: RNA polymerase sigma factor 54; sulfate-transporting ATPase 1047955..1048695 Flexistipes sinusarabici DSM 4947 10815281 YP_004603211.1 CDS Flexsi_0984 NC_015672.1 1048697 1050088 D PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: ddf:DEFDS_1045 sigma 54 modulation protein/ribosomal protein S30EA; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: Sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; RNA polymerase sigma 54 subunit RpoN 1048697..1050088 Flexistipes sinusarabici DSM 4947 10815282 YP_004603212.1 CDS Flexsi_0985 NC_015672.1 1050090 1050623 D PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: ddf:DEFDS_1046 PTS system fructose-specific transporter subunit IIA; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; SPTR: PTS system, fructose-specific enzyme II, A component; sigma 54 modulation protein/30S ribosomal protein S30EA 1050090..1050623 Flexistipes sinusarabici DSM 4947 10815283 YP_004603213.1 CDS Flexsi_0986 NC_015672.1 1050633 1051094 D PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose subfamily, IIA component; COGs: COG1493 Serine kinase of the HPr protein regulates carbohydrate metabolism; HAMAP: HPr kinase/phosphorylase; InterPro IPR011126:IPR011104; KEGG: cni:Calni_1427 hpr(ser) kinase/phosphatase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal; SPTR: HPr kinase/phosphorylase; putative PTS IIA-like nitrogen-regulatory protein PtsN 1050633..1051094 Flexistipes sinusarabici DSM 4947 10815284 YP_004603214.1 CDS Flexsi_0987 NC_015672.1 1051094 1052071 D PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; COGs: COG1660 P-loop-containing kinase; HAMAP: ATPase, P-loop-containing; InterPro IPR005337; KEGG: cni:Calni_1426 hypothetical protein; SPTR: UPF0042 nucleotide-binding protein Calni_1426; HPr kinase 1051094..1052071 Flexistipes sinusarabici DSM 4947 10815285 YP_004603215.1 CDS Flexsi_0988 NC_015672.1 1052072 1052926 D PFAM: P-loop ATPase protein family; COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: cni:Calni_1425 pts system fructose subfamily IIA component; PFAM: Phosphotransferase system, fructose subfamily IIA component; SPTR: PTS system fructose subfamily IIA component; hypothetical protein 1052072..1052926 Flexistipes sinusarabici DSM 4947 10815286 YP_004603216.1 CDS Flexsi_0989 NC_015672.1 1052928 1053326 D PFAM: PTS system fructose IIA component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component; COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB; InterPro IPR004720; KEGG: ddf:DEFDS_1050 PTS system fructose-specific transporter subunit IIB; PFAM: Phosphotransferase system, sorbose subfamily IIB component; SPTR: PTS system, fructose-specific enzyme II, B component; PTS system fructose subfamily transporter subunit IIA 1052928..1053326 Flexistipes sinusarabici DSM 4947 10815287 YP_004603217.1 CDS Flexsi_0990 NC_015672.1 1053323 1053811 D PFAM: PTS system sorbose subfamily IIB component; KEGG: ddf:DEFDS_1051 hypothetical protein; SPTR: Putative uncharacterized protein; PTS system sorbose subfamily transporter subunit IIB 1053323..1053811 Flexistipes sinusarabici DSM 4947 10815288 YP_004603218.1 CDS Flexsi_0991 NC_015672.1 1053813 1054466 D COGs: COG3716 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IID; InterPro IPR004704; KEGG: ddf:DEFDS_1052 hypothetical protein; PFAM: Phosphotransferase system, mannose/fructose/sorbose family IID component; SPTR: Putative uncharacterized protein; hypothetical protein 1053813..1054466 Flexistipes sinusarabici DSM 4947 10815289 YP_004603219.1 CDS Flexsi_0992 NC_015672.1 1054451 1055161 D PFAM: PTS system mannose/fructose/sorbose family IID component; COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: cni:Calni_1421 phosphotransferase system, phosphocarrier protein hpr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PTS system mannose/fructose/sorbose family transporter subunit IID 1054451..1055161 Flexistipes sinusarabici DSM 4947 10815290 YP_004603220.1 CDS Flexsi_0993 NC_015672.1 1055184 1055450 D PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR008731:IPR008279:IPR000121:IPR006318; KEGG: ddf:DEFDS_1054 PTS system transporter enzyme I; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SPTR: PTS system, enzyme I, phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; phosphotransferase system, phosphocarrier protein HPr 1055184..1055450 Flexistipes sinusarabici DSM 4947 10815291 YP_004603221.1 CDS Flexsi_0994 NC_015672.1 1055447 1057189 D PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: ddf:DEFDS_2164 hypothetical protein; SPTR: Putative uncharacterized protein; phosphoenolpyruvate-protein phosphotransferase 1055447..1057189 Flexistipes sinusarabici DSM 4947 10815292 YP_004603222.1 CDS Flexsi_0995 NC_015672.1 1057201 1057710 D PFAM: Predicted permease; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: sfu:Sfum_0231 PAS/PAC sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; hypothetical protein 1057201..1057710 Flexistipes sinusarabici DSM 4947 10815293 YP_004603223.1 CDS Flexsi_0996 NC_015672.1 1057765 1058160 D PFAM: Response regulator receiver domain; response regulator receiver protein 1057765..1058160 Flexistipes sinusarabici DSM 4947 10815294 YP_004603224.1 CDS Flexsi_0997 NC_015672.1 1058390 1059499 D PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: ddf:DEFDS_1484 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: Putative uncharacterized protein; NGG1p interacting factor 3 protein, NIF3 1058390..1059499 Flexistipes sinusarabici DSM 4947 10815296 YP_004603225.1 CDS Flexsi_0998 NC_015672.1 1059502 1060236 D PFAM: Putative zinc ribbon domain; COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: ddf:DEFDS_1483 ribonuclease HI; PFAM: Ribonuclease H; SPTR: Ribonuclease HI; hypothetical protein 1059502..1060236 Flexistipes sinusarabici DSM 4947 10815297 YP_004603226.1 CDS Flexsi_0999 NC_015672.1 1060237 1060677 D PFAM: RNase H; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: cbi:CLJ_B1218 zinc transporter, ZIP family; PFAM: Zinc/iron permease; SPTR: Zinc transporter, ZIP family; ribonuclease H 1060237..1060677 Flexistipes sinusarabici DSM 4947 10815298 YP_004603227.1 CDS Flexsi_1000 NC_015672.1 1061146 1061883 D PFAM: ZIP Zinc transporter; KEGG: ddf:DEFDS_1480 hypothetical protein; SPTR: Putative uncharacterized protein; zinc/iron permease 1061146..1061883 Flexistipes sinusarabici DSM 4947 10815299 YP_004603228.1 CDS Flexsi_1001 NC_015672.1 1062121 1062642 D COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR000878:IPR008189; KEGG: ddf:DEFDS_0501 tetrapyrrole methylase family protein; PFAM: Tetrapyrrole methylase; SPTR: Ribosomal RNA small subunit methyltransferase I; TIGRFAM: Uncharacterised protein family UPF0011; hypothetical protein 1062121..1062642 Flexistipes sinusarabici DSM 4947 10815300 YP_004603229.1 CDS Flexsi_1002 NC_015672.1 1062631 1063431 R PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; KEGG: ddf:DEFDS_0502 hypothetical protein; SPTR: Putative uncharacterized protein; ribosomal RNA small subunit methyltransferase I complement(1062631..1063431) Flexistipes sinusarabici DSM 4947 10815301 YP_004603230.1 CDS Flexsi_1003 NC_015672.1 1063434 1063847 R PFAM: Protein of unknown function (DUF2914); COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR005982; KEGG: ddf:DEFDS_0503 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase; hypothetical protein complement(1063434..1063847) Flexistipes sinusarabici DSM 4947 10815302 YP_004603231.1 CDS Flexsi_1004 NC_015672.1 1063861 1064817 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; KEGG: cni:Calni_1309 hypothetical protein; SPTR: Putative uncharacterized protein; thioredoxin reductase complement(1063861..1064817) Flexistipes sinusarabici DSM 4947 10815303 YP_004603232.1 CDS Flexsi_1005 NC_015672.1 1064967 1065227 R COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR004393; KEGG: ddf:DEFDS_0506 nicotinate-nucleotide pyrophosphorylase carboxylating; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Nicotinate-nucleotide pyrophosphorylase, carboxylating; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; hypothetical protein complement(1064967..1065227) Flexistipes sinusarabici DSM 4947 10815304 YP_004603233.1 CDS Flexsi_1006 NC_015672.1 1065220 1066065 R PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR019499:IPR002303; KEGG: ddf:DEFDS_0507 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase, class Ia; nicotinate-nucleotide pyrophosphorylase complement(1065220..1066065) Flexistipes sinusarabici DSM 4947 10815305 YP_004603234.1 CDS Flexsi_1007 NC_015672.1 1066059 1068689 R PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; KEGG: cni:Calni_1313 hypothetical protein; SPTR: Putative uncharacterized protein; valyl-tRNA synthetase complement(1066059..1068689) Flexistipes sinusarabici DSM 4947 10815306 YP_004603235.1 CDS Flexsi_1008 NC_015672.1 1068863 1069075 R COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: ddf:DEFDS_0509 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein complement(1068863..1069075) Flexistipes sinusarabici DSM 4947 10815307 YP_004603236.1 CDS Flexsi_1009 NC_015672.1 1069191 1069613 R PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: ddf:DEFDS_0510 hypothetical protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; hypothetical protein complement(1069191..1069613) Flexistipes sinusarabici DSM 4947 10815308 YP_004603237.1 CDS Flexsi_1010 NC_015672.1 1069591 1071105 R PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611:IPR011913; KEGG: cni:Calni_1316 rfae bifunctional protein; PFAM: Carbohydrate/purine kinase; SPTR: RfaE bifunctional protein; TIGRFAM: RfaE bifunctional protein, domain I; YjeF-like protein complement(1069591..1071105) Flexistipes sinusarabici DSM 4947 10815309 YP_004603238.1 CDS Flexsi_1011 NC_015672.1 1071105 1072094 R PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I; InterPro IPR005651; KEGG: ddf:DEFDS_0512 hypothetical protein; PFAM: Protein of unknown function DUF343; SPTR: Putative uncharacterized protein; rfaE bifunctional protein complement(1071105..1072094) Flexistipes sinusarabici DSM 4947 10815310 YP_004603239.1 CDS Flexsi_1012 NC_015672.1 1072101 1072286 R PFAM: Trm112p-like protein; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein complement(1072101..1072286) Flexistipes sinusarabici DSM 4947 10815311 YP_004603240.1 CDS Flexsi_1013 NC_015672.1 1072566 1073885 R PFAM: Transposase DDE domain; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: ddf:DEFDS_0684 C4-dicarboxylate transporter large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate transporter, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; transposase IS4 family protein complement(1072566..1073885) Flexistipes sinusarabici DSM 4947 10815312 YP_004603241.1 CDS Flexsi_1014 NC_015672.1 1074173 1075456 R PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0683 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; TRAP dicarboxylate transporter subunit DctM complement(1074173..1075456) Flexistipes sinusarabici DSM 4947 10815313 YP_004603242.1 CDS Flexsi_1015 NC_015672.1 1075459 1075971 R PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: ddf:DEFDS_0682 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: C4-dicarboxylate transporter, substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; tripartite AtP-independent periplasmic transporter subunit DctQ complement(1075459..1075971) Flexistipes sinusarabici DSM 4947 10815314 YP_004603243.1 CDS Flexsi_1016 NC_015672.1 1076029 1077018 R PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; manually curated; TRAP dicarboxylate transporter subunit DctP complement(1076029..1077018) Flexistipes sinusarabici DSM 4947 10815315 YP_004603244.1 CDS Flexsi_1018 NC_015672.1 1078336 1079094 D PFAM: ABC transporter; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: sfu:Sfum_2735 ABC-3 protein; PFAM: ABC-3; SPTR: ABC-3 protein; phosphonate-transporting ATPase 1078336..1079094 Flexistipes sinusarabici DSM 4947 10815317 YP_004603245.1 CDS Flexsi_1019 NC_015672.1 1079105 1079920 D PFAM: ABC 3 transport family; COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: cni:Calni_1256 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: Putative tRNA (cytidine/uridine-2'-O-)-methyltransferase Calni_1256; ABC transporter 1079105..1079920 Flexistipes sinusarabici DSM 4947 10815318 YP_004603246.1 CDS Flexsi_1020 NC_015672.1 1079923 1080390 D PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR013656:IPR003661:IPR003594; KEGG: ddf:DEFDS_1377 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative uncharacterized protein; tRNA/rRNA methyltransferase SpoU 1079923..1080390 Flexistipes sinusarabici DSM 4947 10815319 YP_004603247.1 CDS Flexsi_1021 NC_015672.1 1080387 1082579 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_1376 two-component system, NtrC family, response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, response regulator; multi-sensor signal transduction histidine kinase 1080387..1082579 Flexistipes sinusarabici DSM 4947 10815320 YP_004603248.1 CDS Flexsi_1022 NC_015672.1 1082569 1083930 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: cni:Calni_1703 trap dicarboxylate transporter, dCTP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; Fis family two component sigma-54 specific transcriptional regulator 1082569..1083930 Flexistipes sinusarabici DSM 4947 10815321 YP_004603249.1 CDS Flexsi_1023 NC_015672.1 1083933 1084925 D PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; TRAP dicarboxylate transporter subunit DctP 1083933..1084925 Flexistipes sinusarabici DSM 4947 10815322 YP_004603250.1 CDS Flexsi_1024 NC_015672.1 1084949 1085257 D KEGG: cni:Calni_1704 trap C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP C4-dicarboxylate transport system permease DctM subunit; hypothetical protein 1084949..1085257 Flexistipes sinusarabici DSM 4947 10815323 YP_004603251.1 CDS Flexsi_1025 NC_015672.1 1085242 1086468 D COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: cni:Calni_1255 ribosomal L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; SPTR: Ribosomal L11 methyltransferase; TRAP dicarboxylate transporter subunit DctM 1085242..1086468 Flexistipes sinusarabici DSM 4947 10815324 YP_004603252.1 CDS Flexsi_1026 NC_015672.1 1086478 1087257 D PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; InterPro IPR004843; KEGG: ddf:DEFDS_1372 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; ribosomal L11 methyltransferase 1086478..1087257 Flexistipes sinusarabici DSM 4947 10815325 YP_004603253.1 CDS Flexsi_1027 NC_015672.1 1087254 1088030 D PFAM: Calcineurin-like phosphoesterase; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: cni:Calni_1254 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; metallophosphoesterase 1087254..1088030 Flexistipes sinusarabici DSM 4947 10815326 YP_004603254.1 CDS Flexsi_1028 NC_015672.1 1088018 1088722 D PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: cni:Calni_1253 cmp/dcmp deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: CMP/dCMP deaminase zinc-binding protein; ribosomal RNA small subunit methyltransferase E 1088018..1088722 Flexistipes sinusarabici DSM 4947 10815327 YP_004603255.1 CDS Flexsi_1029 NC_015672.1 1088715 1089185 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; InterPro IPR002514; KEGG: has:Halsa_0053 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911; SPTR: Transposase IS3/IS911 family protein; CMP/dCMP deaminase zinc-binding protein 1088715..1089185 Flexistipes sinusarabici DSM 4947 10815328 YP_004603256.1 CDS Flexsi_1030 NC_015672.1 1089325 1089633 D PFAM: Transposase; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: afl:Aflv_2449 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase; manually curated; transposase IS3/IS911 family protein 1089325..1089633 Flexistipes sinusarabici DSM 4947 10815329 YP_004603257.1 CDS Flexsi_1031 NC_015672.1 1089666 1090499 D PFAM: Integrase core domain; integrase catalytic subunit 1089666..1090499 Flexistipes sinusarabici DSM 4947 10815330 YP_004603258.1 CDS Flexsi_1032 NC_015672.1 1090492 1090794 D COGs: COG1651 Protein-disulfide isomerase; KEGG: cni:Calni_1066 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1090492..1090794 Flexistipes sinusarabici DSM 4947 10815331 YP_004603259.1 CDS Flexsi_1033 NC_015672.1 1090954 1091895 D COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095:IPR020582; KEGG: ddf:DEFDS_1173 acetyl-CoA carboxylase carboxyl transferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; hypothetical protein 1090954..1091895 Flexistipes sinusarabici DSM 4947 10815332 YP_004603260.1 CDS Flexsi_1034 NC_015672.1 1091933 1092892 D PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein mutL; InterPro IPR003594:IPR013507:IPR014790:IPR014763; KEGG: cni:Calni_1068 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1091933..1092892 Flexistipes sinusarabici DSM 4947 10815333 YP_004603261.1 CDS Flexsi_1035 NC_015672.1 1092879 1094603 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; InterPro IPR002627:IPR018022; KEGG: ddf:DEFDS_1175 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; DNA mismatch repair protein mutL 1092879..1094603 Flexistipes sinusarabici DSM 4947 10815334 YP_004603262.1 CDS Flexsi_1036 NC_015672.1 1094600 1095523 D PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR001163:IPR005001; KEGG: ddf:DEFDS_1085 RNA-binding protein Hfq; PFAM: Like-Sm ribonucleoprotein, core; SPTR: Protein hfq; TIGRFAM: Host factor Hfq; tRNA dimethylallyltransferase 1094600..1095523 Flexistipes sinusarabici DSM 4947 10815335 YP_004603263.1 CDS Flexsi_1037 NC_015672.1 1095719 1095943 D PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; KEGG: ddf:DEFDS_1086 hypothetical protein; SPTR: Putative uncharacterized protein; RNA chaperone Hfq 1095719..1095943 Flexistipes sinusarabici DSM 4947 10815336 YP_004603264.1 CDS Flexsi_1038 NC_015672.1 1095959 1096474 D KEGG: cni:Calni_1667 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1095959..1096474 Flexistipes sinusarabici DSM 4947 10815337 YP_004603265.1 CDS Flexsi_1039 NC_015672.1 1096675 1097844 D InterPro IPR007060; KEGG: ddf:DEFDS_1089 cell division protein FtsB; PFAM: Septum formation initiator; SPTR: Cell division protein FtsB; hypothetical protein 1096675..1097844 Flexistipes sinusarabici DSM 4947 10815338 YP_004603266.1 CDS Flexsi_1040 NC_015672.1 1097841 1098149 D PFAM: Septum formation initiator; COGs: COG1570 Exonuclease VII large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; InterPro IPR004365:IPR020579:IPR003753; KEGG: ddf:DEFDS_1090 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: Exonuclease VII, large subunit; septum formation initiator 1097841..1098149 Flexistipes sinusarabici DSM 4947 10815339 YP_004603267.1 CDS Flexsi_1041 NC_015672.1 1098109 1099458 D PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR001437:IPR006359; KEGG: ddf:DEFDS_1091 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: Transcription elongation factor greA; TIGRFAM: Prokaryotic transcription elongation factor GreA; exodeoxyribonuclease 7 large subunit 1098109..1099458 Flexistipes sinusarabici DSM 4947 10815340 YP_004603268.1 CDS Flexsi_1042 NC_015672.1 1099451 1099924 D PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; This gene is disrupted by insertion of repetitive element; manually curated; transcription elongation factor GreA 1099451..1099924 Flexistipes sinusarabici DSM 4947 10815341 YP_004603269.1 CDS Flexsi_1044 NC_015672.1 1101047 1102096 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462:IPR004570; KEGG: cni:Calni_1662 cdp-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR:CDP-diacylglycerol/glycerol-3-phosphate3-phosp hatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; transposase IS4 family protein 1101047..1102096 Flexistipes sinusarabici DSM 4947 10815343 YP_004603270.1 CDS Flexsi_1045 NC_015672.1 1102627 1103172 D PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160:IPR001450; KEGG: dap:Dacet_1321 hypothetical protein; PFAM: Protein of unknown function DUF362; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1102627..1103172 Flexistipes sinusarabici DSM 4947 10815344 YP_004603271.1 CDS Flexsi_1046 NC_015672.1 1103165 1104247 D PFAM: Domain of unknown function (DUF362); COGs: COG0344 membrane protein; HAMAP: Protein of unknown function DUF205; InterPro IPR003811:IPR020788; KEGG: ddf:DEFDS_1095 hypothetical protein; PFAM: Protein of unknown function DUF205; SPTR: Glycerol-3-phosphate acyltransferase; TIGRFAM: Membrane protein YgiH; hypothetical protein 1103165..1104247 Flexistipes sinusarabici DSM 4947 10815345 YP_004603272.1 CDS Flexsi_1047 NC_015672.1 1104244 1104843 D PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR002734:IPR004794:IPR011549; KEGG: cni:Calni_1660 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; glycerol-3-phosphate acyltransferase 1104244..1104843 Flexistipes sinusarabici DSM 4947 10815346 YP_004603273.1 CDS Flexsi_1048 NC_015672.1 1104836 1105993 D PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: ddf:DEFDS_1097 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; riboflavin biosynthesis protein RibD 1104836..1105993 Flexistipes sinusarabici DSM 4947 10815347 YP_004603274.1 CDS Flexsi_1049 NC_015672.1 1105978 1106631 D PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: GTP cyclohydrolase-2; InterPro IPR000422:IPR000926; KEGG: ddf:DEFDS_1098 riboflavin biosynthesis bifunctional protein RibBA; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis bifunctional protein RibBA; TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II; riboflavin synthase subunit alpha 1105978..1106631 Flexistipes sinusarabici DSM 4947 10815348 YP_004603275.1 CDS Flexsi_1050 NC_015672.1 1106631 1107851 D PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: cni:Calni_1657 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; GTP cyclohydrolase-2 1106631..1107851 Flexistipes sinusarabici DSM 4947 10815349 YP_004603276.1 CDS Flexsi_1051 NC_015672.1 1107873 1108343 D PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; COGs: COG0781 Transcription termination factor; HAMAP: N utilization substance protein B-like protein; InterPro IPR006027:IPR011605; KEGG: dap:Dacet_1327 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: N utilization substance protein B homolog; TIGRFAM: NusB antitermination factor; 6,7-dimethyl-8-ribityllumazine synthase 1107873..1108343 Flexistipes sinusarabici DSM 4947 10815350 YP_004603277.1 CDS Flexsi_1052 NC_015672.1 1108347 1108784 D PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; KEGG: cni:Calni_1655 hypothetical protein; SPTR: Putative uncharacterized protein; NusB antitermination factor 1108347..1108784 Flexistipes sinusarabici DSM 4947 10815351 YP_004603278.1 CDS Flexsi_1053 NC_015672.1 1108756 1109190 D KEGG: ddf:DEFDS_1102 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1108756..1109190 Flexistipes sinusarabici DSM 4947 10815352 YP_004603279.1 CDS Flexsi_1054 NC_015672.1 1109174 1109455 D COGs: COG3481 HD-superfamily hydrolase; InterPro IPR004365:IPR006674:IPR003607:IPR006675; KEGG: ddf:DEFDS_1104 HAD-superfamily hydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HAD-superfamily hydrolase; TIGRFAM: HDIG; hypothetical protein 1109174..1109455 Flexistipes sinusarabici DSM 4947 10815353 YP_004603280.1 CDS Flexsi_1055 NC_015672.1 1109497 1110414 D PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043:IPR006042; KEGG: ddf:DEFDS_1105 uracil transporter; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Uracil transporter; TIGRFAM: Xanthine/uracil permease; metal dependent phosphohydrolase 1109497..1110414 Flexistipes sinusarabici DSM 4947 10815354 YP_004603281.1 CDS Flexsi_1056 NC_015672.1 1110469 1111701 D PFAM: Permease family; TIGRFAM: uracil-xanthine permease; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836:IPR005765; KEGG: cni:Calni_1651 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; uracil-xanthine permease 1110469..1111701 Flexistipes sinusarabici DSM 4947 10815355 YP_004603282.1 CDS Flexsi_1057 NC_015672.1 1111701 1112336 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cni:Calni_0487 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; uracil phosphoribosyltransferase 1111701..1112336 Flexistipes sinusarabici DSM 4947 10815356 YP_004603283.1 CDS Flexsi_1058 NC_015672.1 1112365 1113507 R PFAM: Major Facilitator Superfamily; KEGG: ssm:Spirs_1067 hypothetical protein; SPTR: Putative uncharacterized protein; major facilitator superfamily protein complement(1112365..1113507) Flexistipes sinusarabici DSM 4947 10815357 YP_004603284.1 CDS Flexsi_1059 NC_015672.1 1113582 1113683 R COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: ssm:Spirs_1066 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter; hypothetical protein complement(1113582..1113683) Flexistipes sinusarabici DSM 4947 10815358 YP_004603285.1 CDS Flexsi_1060 NC_015672.1 1113684 1115195 R PFAM: Sodium:neurotransmitter symporter family; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912:IPR006236; KEGG: ddf:DEFDS_0857 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; sodium:neurotransmitter symporter complement(1113684..1115195) Flexistipes sinusarabici DSM 4947 10815359 YP_004603286.1 CDS Flexsi_1061 NC_015672.1 1115460 1117082 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: ddf:DEFDS_0856 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; D-3-phosphoglycerate dehydrogenase 1115460..1117082 Flexistipes sinusarabici DSM 4947 10815360 YP_004603287.1 CDS Flexsi_1062 NC_015672.1 1117082 1117480 D PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: dap:Dacet_2223 ROK family protein; PFAM: ROK; PRIAM: Glucokinase; SPTR: ROK family protein; hypothetical protein 1117082..1117480 Flexistipes sinusarabici DSM 4947 10815361 YP_004603288.1 CDS Flexsi_1063 NC_015672.1 1117636 1118535 R PFAM: ROK family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR003148:IPR006037; KEGG: gfo:GFO_1965 KefB-and KefC-like glutathione-regulated potassium-efflux system protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: KefB-and KefC-like glutathione-regulated potassium-efflux system protein; glucokinase complement(1117636..1118535) Flexistipes sinusarabici DSM 4947 10815362 YP_004603289.1 CDS Flexsi_1064 NC_015672.1 1118846 1120819 D PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG1171 Threonine dehydratase; InterPro IPR001926:IPR002912:IPR005789; KEGG: ddf:DEFDS_2182 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT; SPTR: Threonine dehydratase; TIGRFAM: Threonine dehydratase II; sodium/hydrogen exchanger 1118846..1120819 Flexistipes sinusarabici DSM 4947 10815363 YP_004603290.1 CDS Flexsi_1065 NC_015672.1 1120831 1122039 D PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; threonine dehydratase 1120831..1122039 Flexistipes sinusarabici DSM 4947 10815364 YP_004603291.1 CDS Flexsi_1066 NC_015672.1 1122347 1123714 D PFAM: Transposase domain (DUF772); COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006199:IPR019759:IPR006200; KEGG: dap:Dacet_1375 transcriptional repressor, LexA family; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region; SPTR: LexA repressor; TIGRFAM: Peptidase S24, LexA repressor; transposase IS4 family protein 1122347..1123714 Flexistipes sinusarabici DSM 4947 10815365 YP_004603292.1 CDS Flexsi_1067 NC_015672.1 1124172 1124762 D PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; KEGG: cni:Calni_0692 hypothetical protein; SPTR: Putative uncharacterized protein; SOS-response transcriptional repressor, LexA 1124172..1124762 Flexistipes sinusarabici DSM 4947 10815366 YP_004603293.1 CDS Flexsi_1068 NC_015672.1 1124843 1125091 D COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126; KEGG: ddf:DEFDS_0477 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; hypothetical protein 1124843..1125091 Flexistipes sinusarabici DSM 4947 10815367 YP_004603294.1 CDS Flexsi_1069 NC_015672.1 1125088 1126293 D PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; DNA polymerase IV 1125088..1126293 Flexistipes sinusarabici DSM 4947 10815368 YP_004603295.1 CDS Flexsi_1070 NC_015672.1 1126342 1126458 D InterPro IPR001450; KEGG: ddf:DEFDS_1334 hypothetical protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; hypothetical protein 1126342..1126458 Flexistipes sinusarabici DSM 4947 10815369 YP_004603296.1 CDS Flexsi_1071 NC_015672.1 1126565 1128217 D PFAM: 4Fe-4S binding domain; COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; KEGG: ddf:DEFDS_1333 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin 1126565..1128217 Flexistipes sinusarabici DSM 4947 10815370 YP_004603297.1 CDS Flexsi_1072 NC_015672.1 1128217 1128819 D PFAM: Nitrate reductase delta subunit; InterPro IPR006311; hypothetical protein 1128217..1128819 Flexistipes sinusarabici DSM 4947 10815371 YP_004603298.1 CDS Flexsi_1073 NC_015672.1 1128844 1129023 D PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: formate dehydrogenase region TAT target; Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR019546:IPR006963:IPR006656:IPR006657:IPR 006311; KEGG: ddf:DEFDS_1331 formate dehydrogenase subunit alpha; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase, alpha subunit; hypothetical protein 1128844..1129023 Flexistipes sinusarabici DSM 4947 10815372 YP_004603299.1 CDS Flexsi_1074 NC_015672.1 1129034 1131817 D PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_1330 formate dehydrogenase subunit beta; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Formate dehydrogenase, beta subunit; nitrate reductase 1129034..1131817 Flexistipes sinusarabici DSM 4947 10815373 YP_004603300.1 CDS Flexsi_1075 NC_015672.1 1131833 1132420 D PFAM: 4Fe-4S binding domain; COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR006471; KEGG: ddf:DEFDS_1329 formate dehydrogenase subunit gamma; SPTR: Formate dehydrogenase, gamma subunit; TIGRFAM: Formate dehydrogenase, gamma subunit; 4Fe-4S ferredoxin 1131833..1132420 Flexistipes sinusarabici DSM 4947 10815374 YP_004603301.1 CDS Flexsi_1076 NC_015672.1 1132675 1133577 D PFAM: Prokaryotic cytochrome b561; TIGRFAM: formate dehydrogenase, gamma subunit; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; formate dehydrogenase subunit gamma 1132675..1133577 Flexistipes sinusarabici DSM 4947 10815375 YP_004603302.1 CDS Flexsi_1077 NC_015672.1 1134009 1135376 R PFAM: Transposase domain (DUF772); COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: pmx:PERMA_0406 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Oligopeptidase A; transposase IS4 family protein complement(1134009..1135376) Flexistipes sinusarabici DSM 4947 10815376 YP_004603303.1 CDS Flexsi_1078 NC_015672.1 1135608 1137548 R PFAM: Peptidase family M3; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR003660:IPR003594; KEGG: swo:Swol_0353 putative CheA signal transduction histidine kinases; PFAM: HAMP linker domain; ATP-binding region, ATPase-like; SMART: HAMP linker domain; ATP-binding region, ATPase-like; SPTR: Putative CheA signal transduction histidine kinases; oligopeptidase A complement(1135608..1137548) Flexistipes sinusarabici DSM 4947 10815377 YP_004603304.1 CDS Flexsi_1079 NC_015672.1 1137645 1140167 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: mag:amb2637 hypothetical protein; SPTR: Putative uncharacterized protein; putative CheA signal transduction histidine kinase 1137645..1140167 Flexistipes sinusarabici DSM 4947 10815378 YP_004603305.1 CDS Flexsi_1080 NC_015672.1 1140170 1140694 D COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mag:amb2638 FOG: CheY-like receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: FOG: CheY-like receiver; hypothetical protein 1140170..1140694 Flexistipes sinusarabici DSM 4947 10815379 YP_004603306.1 CDS Flexsi_1081 NC_015672.1 1140666 1141043 D PFAM: Response regulator receiver domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dma:DMR_28660 GGDEF domain protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; response regulator receiver protein 1140666..1141043 Flexistipes sinusarabici DSM 4947 10815380 YP_004603307.1 CDS Flexsi_1082 NC_015672.1 1141104 1142069 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0348 Polyferredoxin; InterPro IPR001450; KEGG: dap:Dacet_0868 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; diguanylate cyclase 1141104..1142069 Flexistipes sinusarabici DSM 4947 10815381 YP_004603308.1 CDS Flexsi_1083 NC_015672.1 1142080 1143111 R COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR018317:IPR004479; KEGG: cni:Calni_1217 ExsB protein; PFAM: Queuosine synthesis-like; SPTR: 7-cyano-7-deazaguanine synthase; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; 4Fe-4S ferredoxin complement(1142080..1143111) Flexistipes sinusarabici DSM 4947 10815382 YP_004603309.1 CDS Flexsi_1084 NC_015672.1 1143134 1143820 D PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023:IPR012828; KEGG: ddf:DEFDS_0940 6-phosphofructokinase; PFAM: Phosphofructokinase; PRIAM: 6-phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; exsB protein 1143134..1143820 Flexistipes sinusarabici DSM 4947 10815383 YP_004603310.1 CDS Flexsi_1085 NC_015672.1 1143822 1144784 D PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG2096 conserved hypothetical protein; InterPro IPR002779:IPR017858; KEGG: cni:Calni_1215 ATP/cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; 6-phosphofructokinase 1143822..1144784 Flexistipes sinusarabici DSM 4947 10815384 YP_004603311.1 CDS Flexsi_1086 NC_015672.1 1144991 1145539 D PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: ddf:DEFDS_1583 hypothetical protein; SPTR: Putative uncharacterized protein; ATP/cobalamin adenosyltransferase 1144991..1145539 Flexistipes sinusarabici DSM 4947 10815385 YP_004603312.1 CDS Flexsi_1087 NC_015672.1 1145514 1145966 D PFAM: Yqey-like protein; InterPro IPR003825; KEGG: ddf:DEFDS_1584 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein; hypothetical protein 1145514..1145966 Flexistipes sinusarabici DSM 4947 10815386 YP_004603313.1 CDS Flexsi_1088 NC_015672.1 1145953 1146465 D PFAM: Colicin V production protein; COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432:IPR002625:IPR007696; KEGG: ddf:DEFDS_1585 DNA mismatch repair protein MutS2; PFAM: Smr protein/MutS2 C-terminal; DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal; SPTR: DNA mismatch repair protein MutS2; colicin V production protein 1145953..1146465 Flexistipes sinusarabici DSM 4947 10815387 YP_004603314.1 CDS Flexsi_1089 NC_015672.1 1146476 1148773 D PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: ddf:DEFDS_1285 MntR family transcriptional regulator; PFAM: Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Transcriptional regulator, MntR family; Smr protein/MutS2 1146476..1148773 Flexistipes sinusarabici DSM 4947 10815388 YP_004603315.1 CDS Flexsi_1090 NC_015672.1 1149047 1149484 D PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1647 Esterase/lipase; KEGG: ddf:DEFDS_1284 hypothetical protein; SPTR: Putative uncharacterized protein; DtxR family iron (metal) dependent repressor 1149047..1149484 Flexistipes sinusarabici DSM 4947 10815389 YP_004603316.1 CDS Flexsi_1091 NC_015672.1 1149481 1150434 D COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: ddf:DEFDS_1283 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; hypothetical protein 1149481..1150434 Flexistipes sinusarabici DSM 4947 10815390 YP_004603317.1 CDS Flexsi_1092 NC_015672.1 1150421 1151248 D PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR013570; KEGG: ddf:DEFDS_1282 TetR family transcriptional regulator; PFAM: Transcriptional regulator, YsiA, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; pyrroline-5-carboxylate reductase 1150421..1151248 Flexistipes sinusarabici DSM 4947 10815391 YP_004603318.1 CDS Flexsi_1093 NC_015672.1 1151238 1151816 D PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family; COGs: COG2985 permease; InterPro IPR006512:IPR006037; KEGG: cni:Calni_1187 yide/ybjl duplication; PFAM: YidE/YbjL duplication; Regulator of K+ conductance, C-terminal; SPTR: YidE/YbjL duplication; TIGRFAM: YidE/YbjL duplication; TetR family transcriptional regulator 1151238..1151816 Flexistipes sinusarabici DSM 4947 10815392 YP_004603319.1 CDS Flexsi_1094 NC_015672.1 1151825 1153399 D PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain; KEGG: aae:aq_2066 hypothetical protein; SPTR: Putative uncharacterized protein; YidE/YbjL duplication 1151825..1153399 Flexistipes sinusarabici DSM 4947 10815393 YP_004603320.1 CDS Flexsi_1095 NC_015672.1 1153396 1153794 D InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 1153396..1153794 Flexistipes sinusarabici DSM 4947 10815394 YP_004603321.1 CDS Flexsi_1096 NC_015672.1 1154101 1155420 D PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 1154101..1155420 Flexistipes sinusarabici DSM 4947 10815395 YP_004603322.1 CDS Flexsi_1098 NC_015672.1 1156126 1156752 D PFAM: LysE type translocator; lysine exporter protein LysE/YggA 1156126..1156752 Flexistipes sinusarabici DSM 4947 10815397 YP_004603323.1 CDS Flexsi_1099 NC_015672.1 1157190 1158140 R PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR003439:IPR000644:IPR003593:IPR005892; KEGG: dsa:Desal_0676 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core; PRIAM: Quaternary-amine-transporting ATPase; SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core; SPTR: Glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; magnesium and cobalt transport protein CorA complement(1157190..1158140) Flexistipes sinusarabici DSM 4947 10815399 YP_004603324.1 CDS Flexsi_1100 NC_015672.1 1158399 1159604 D PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: drt:Dret_2272 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; glycine betaine/L-proline ABC transporter ATPase 1158399..1159604 Flexistipes sinusarabici DSM 4947 10815400 YP_004603325.1 CDS Flexsi_1101 NC_015672.1 1159597 1160424 D PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: drt:Dret_2271 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; ABC transporter 1159597..1160424 Flexistipes sinusarabici DSM 4947 10815401 YP_004603326.1 CDS Flexsi_1102 NC_015672.1 1160452 1161327 D PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR013563:IPR003593:IPR010066; KEGG: dap:Dacet_1755 ABC transporter related protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; glycine betaine ABC transporter periplasmic subunit 1160452..1161327 Flexistipes sinusarabici DSM 4947 10815402 YP_004603327.1 CDS Flexsi_1103 NC_015672.1 1161471 1162427 R PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; KEGG: ddf:DEFDS_1488 hypothetical protein; SPTR: Putative uncharacterized protein; oligopeptide/dipeptide ABC transporter ATPase complement(1161471..1162427) Flexistipes sinusarabici DSM 4947 10815403 YP_004603328.1 CDS Flexsi_1104 NC_015672.1 1162530 1163099 D COGs: COG0358 DNA primase; InterProIPR002694:IPR013264:IPR006171:IPR006154:IPR 006295; KEGG: ddf:DEFDS_1487 DNA primase; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG; hypothetical protein 1162530..1163099 Flexistipes sinusarabici DSM 4947 10815404 YP_004603329.1 CDS Flexsi_1105 NC_015672.1 1163096 1164817 D PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR007127:IPR009042:IPR007627:IPR007624:IPR 007630:IPR014284:IPR012760; KEGG: ddf:DEFDS_1486 DNA-directed RNA polymerase sigma 70 factor; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; DNA primase 1163096..1164817 Flexistipes sinusarabici DSM 4947 10815405 YP_004603330.1 CDS Flexsi_1106 NC_015672.1 1164824 1166626 D PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR001754:IPR014732; KEGG: cni:Calni_0988 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; RpoD subfamily RNA polymerase sigma-70 subunit 1164824..1166626 Flexistipes sinusarabici DSM 4947 10815406 YP_004603331.1 CDS Flexsi_1107 NC_015672.1 1166886 1167596 D PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; COGs: COG0461 Orotate phosphoribosyltransferase; HAMAP: Orotate phosphoribosyltransferase; InterPro IPR000836:IPR006273; KEGG: cni:Calni_0989 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyltransferase, Thermus type; orotidine 5'-phosphate decarboxylase 1166886..1167596 Flexistipes sinusarabici DSM 4947 10815407 YP_004603332.1 CDS Flexsi_1108 NC_015672.1 1167589 1168164 D PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR001789:IPR003661:IPR003594; KEGG: ddf:DEFDS_0953 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative uncharacterized protein; orotate phosphoribosyltransferase 1167589..1168164 Flexistipes sinusarabici DSM 4947 10815408 YP_004603333.1 CDS Flexsi_1109 NC_015672.1 1168407 1169894 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_0949 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; response regulator receiver sensor signal transduction histidine kinase 1168407..1169894 Flexistipes sinusarabici DSM 4947 10815409 YP_004603334.1 CDS Flexsi_1110 NC_015672.1 1169937 1171271 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383:IPR007197; KEGG: cni:Calni_0271 23S rRNA m(2)a-2503 methyltransferase; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; diguanylate cyclase 1169937..1171271 Flexistipes sinusarabici DSM 4947 10815410 YP_004603335.1 CDS Flexsi_1111 NC_015672.1 1171268 1172308 D PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; InterPro IPR000551; KEGG: cni:Calni_1033 regulatory protein MerR; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Regulatory protein MerR; ribosomal RNA large subunit methyltransferase N 1171268..1172308 Flexistipes sinusarabici DSM 4947 10815411 YP_004603336.1 CDS Flexsi_1112 NC_015672.1 1172359 1172688 R PFAM: MerR family regulatory protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dap:Dacet_1204 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; regulatory protein MerR complement(1172359..1172688) Flexistipes sinusarabici DSM 4947 10815412 YP_004603337.1 CDS Flexsi_1113 NC_015672.1 1172681 1172956 R PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; KEGG: ddf:DEFDS_1533 hypothetical protein; SPTR: Putative uncharacterized protein; histone family protein DNA-binding protein complement(1172681..1172956) Flexistipes sinusarabici DSM 4947 10815413 YP_004603338.1 CDS Flexsi_1114 NC_015672.1 1173263 1174087 R COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR005517:IPR000640:IPR004540:IPR 005225; KEGG: ddf:DEFDS_1534 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G 1; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; hypothetical protein complement(1173263..1174087) Flexistipes sinusarabici DSM 4947 10815414 YP_004603339.1 CDS Flexsi_1115 NC_015672.1 1174139 1176220 R PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010201; KEGG: ddf:DEFDS_1535 membrane protease subunit HflK; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit HflK; TIGRFAM: HflK; translation elongation factor G complement(1174139..1176220) Flexistipes sinusarabici DSM 4947 10815415 YP_004603340.1 CDS Flexsi_1116 NC_015672.1 1176488 1177480 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010200; KEGG: ddf:DEFDS_1536 membrane protease subunit HflC; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit HflC; TIGRFAM: HflC; HflK protein 1176488..1177480 Flexistipes sinusarabici DSM 4947 10815416 YP_004603341.1 CDS Flexsi_1117 NC_015672.1 1177477 1178334 D PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; COGs: COG0460 Homoserine dehydrogenase; InterPro IPR005106:IPR001342:IPR002912; KEGG: ddf:DEFDS_1176 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; SPTR: Homoserine dehydrogenase; HflC protein 1177477..1178334 Flexistipes sinusarabici DSM 4947 10815417 YP_004603342.1 CDS Flexsi_1118 NC_015672.1 1178653 1179966 D PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain; COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR019304:IPR006124:IPR013371:IPR004456; KEGG: ddf:DEFDS_1177 phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; TIGRFAM: Homoserine kinase, putative; Cofactor-independent phosphoglycerate mutase, archaeal; homoserine dehydrogenase 1178653..1179966 Flexistipes sinusarabici DSM 4947 10815418 YP_004603343.1 CDS Flexsi_1119 NC_015672.1 1179985 1181151 D PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR002912:IPR005260:IPR001341; KEGG: ddf:DEFDS_1178 aspartate kinase monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; proposed homoserine kinase 1179985..1181151 Flexistipes sinusarabici DSM 4947 10815419 YP_004603344.1 CDS Flexsi_1120 NC_015672.1 1181167 1182396 D PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005675; KEGG: cni:Calni_0870 (R)-citramalate synthase; PFAM: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; Pyruvate carboxyltransferase; PRIAM: (R)-citramalate synthase; SPTR: (R)-citramalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; aspartate kinase 1181167..1182396 Flexistipes sinusarabici DSM 4947 10815420 YP_004603345.1 CDS Flexsi_1121 NC_015672.1 1182386 1183972 D PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391:IPR015942; KEGG: sul:SYO3AOP1_0987 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase; 2-isopropylmalate synthase 1182386..1183972 Flexistipes sinusarabici DSM 4947 10815421 YP_004603346.1 CDS Flexsi_1122 NC_015672.1 1184079 1184849 D PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; InterPro IPR013509:IPR000788:IPR013344; KEGG: ddf:DEFDS_1169 ribonucleoside-diphosphate reductase alpha chain; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; glutamate racemase 1184079..1184849 Flexistipes sinusarabici DSM 4947 10815422 YP_004603347.1 CDS Flexsi_1123 NC_015672.1 1184910 1187294 R PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: cni:Calni_1519 hypothetical protein; SPTR: Putative uncharacterized protein; ribonucleoside-diphosphate reductase complement(1184910..1187294) Flexistipes sinusarabici DSM 4947 10815423 YP_004603348.1 CDS Flexsi_1124 NC_015672.1 1187572 1188669 R InterPro IPR003088; KEGG: ddf:DEFDS_1171 cytochrome c family protein; PFAM: Cytochrome c, class I; SPTR: Cytochrome c family protein; hypothetical protein complement(1187572..1188669) Flexistipes sinusarabici DSM 4947 10815424 YP_004603349.1 CDS Flexsi_1125 NC_015672.1 1188669 1189946 R PFAM: Cytochrome c; Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013:IPR003141; KEGG: cni:Calni_1860 php domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: PHP domain protein; cytochrome c class I complement(1188669..1189946) Flexistipes sinusarabici DSM 4947 10815425 YP_004603350.1 CDS Flexsi_1126 NC_015672.1 1190356 1191018 D PFAM: PHP domain; KEGG: ddf:DEFDS_0780 hypothetical protein; SPTR: Putative uncharacterized protein; PHP domain-containing protein 1190356..1191018 Flexistipes sinusarabici DSM 4947 10815426 YP_004603351.1 CDS Flexsi_1127 NC_015672.1 1191019 1191582 D COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; InterPro IPR002880:IPR011766:IPR001450:IPR017721; KEGG: ddf:DEFDS_0781 indolepyruvate ferredoxin oxidoreductase subunit alpha; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: Indolepyruvate ferredoxin oxidoreductase, alpha subunit; hypothetical protein 1191019..1191582 Flexistipes sinusarabici DSM 4947 10815427 YP_004603352.1 CDS Flexsi_1128 NC_015672.1 1191589 1193355 D PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: dap:Dacet_1341 pyruvate/ketoisovalerate oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Pyruvate/ketoisovalerate oxidoreductase; indolepyruvate ferredoxin oxidoreductase subunit alpha 1191589..1193355 Flexistipes sinusarabici DSM 4947 10815428 YP_004603353.1 CDS Flexsi_1129 NC_015672.1 1193382 1193951 D PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013:IPR003141; KEGG: dap:Dacet_1342 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: PHP domain protein; Indolepyruvate ferredoxin oxidoreductase 1193382..1193951 Flexistipes sinusarabici DSM 4947 10815429 YP_004603354.1 CDS Flexsi_1130 NC_015672.1 1193955 1194839 D PFAM: PHP domain; COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: ddf:DEFDS_1017 molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A; PHP domain-containing protein 1193955..1194839 Flexistipes sinusarabici DSM 4947 10815430 YP_004603355.1 CDS Flexsi_1131 NC_015672.1 1194854 1195465 D COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: ddf:DEFDS_1018 formate dehydrogenase accessory protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD; SPTR: Formate dehydrogenase accessory protein FdhD; TIGRFAM: Formate dehydrogenase, subunit FdhD; molybdopterin-guanine dinucleotide biosynthesis protein A 1194854..1195465 Flexistipes sinusarabici DSM 4947 10815431 YP_004603356.1 CDS Flexsi_1132 NC_015672.1 1195425 1196201 D PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR004807:IPR006935:IPR001650:IPR001943:IPR 014001; KEGG: dap:Dacet_0842 excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; formate dehydrogenase family accessory protein FdhD 1195425..1196201 Flexistipes sinusarabici DSM 4947 10815432 YP_004603357.1 CDS Flexsi_1133 NC_015672.1 1196198 1198174 D PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460:IPR011816; KEGG: ddf:DEFDS_0662 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Penicillin-binding protein 1A; TIGRFAM: Penicillin-binding protein 1A; UvrABC system protein B 1196198..1198174 Flexistipes sinusarabici DSM 4947 10815433 YP_004603358.1 CDS Flexsi_1134 NC_015672.1 1198180 1200432 D PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterPro IPR003594; KEGG: ddf:DEFDS_0661 two-component system, NtrC family, response regulator GlnL; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Two-component system, NtrC family, response regulator GlnL; penicillin-binding protein 1198180..1200432 Flexistipes sinusarabici DSM 4947 10815434 YP_004603359.1 CDS Flexsi_1135 NC_015672.1 1200436 1201389 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: dap:Dacet_2326 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; histidine kinase 1200436..1201389 Flexistipes sinusarabici DSM 4947 10815435 YP_004603360.1 CDS Flexsi_1136 NC_015672.1 1201386 1202783 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma-54 specific transcriptional regulator 1201386..1202783 Flexistipes sinusarabici DSM 4947 10815436 YP_004603361.1 CDS Flexsi_1137 NC_015672.1 1205256 1205813 D InterPro IPR001387:IPR013096; KEGG: ddf:DEFDS_0680 transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; hypothetical protein 1205256..1205813 Flexistipes sinusarabici DSM 4947 10815438 YP_004603362.1 CDS Flexsi_1138 NC_015672.1 1205915 1206514 D PFAM: Cupin domain; Helix-turn-helix; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: cni:Calni_1121 hypothetical protein; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 1205915..1206514 Flexistipes sinusarabici DSM 4947 10815439 YP_004603363.1 CDS Flexsi_1139 NC_015672.1 1206543 1207067 R COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661; KEGG: cni:Calni_1120 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; hypothetical protein complement(1206543..1207067) Flexistipes sinusarabici DSM 4947 10815440 YP_004603364.1 CDS Flexsi_1140 NC_015672.1 1207072 1208109 R PFAM: His Kinase A (phosphoacceptor) domain; InterPro IPR001387:IPR013096; KEGG: dap:Dacet_1432 transcriptional regulator, XRE family; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; integral membrane sensor signal transduction histidine kinase complement(1207072..1208109) Flexistipes sinusarabici DSM 4947 10815441 YP_004603365.1 CDS Flexsi_1141 NC_015672.1 1208156 1208692 D PFAM: Cupin domain; Helix-turn-helix; COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: ddf:DEFDS_0843 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; cupin 1208156..1208692 Flexistipes sinusarabici DSM 4947 10815442 YP_004603366.1 CDS Flexsi_1142 NC_015672.1 1209101 1209922 D PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721; KEGG: dap:Dacet_1430 pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1209101..1209922 Flexistipes sinusarabici DSM 4947 10815443 YP_004603367.1 CDS Flexsi_1143 NC_015672.1 1209919 1210758 D PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: cni:Calni_1116 L-aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase; pantothenate synthetase 1209919..1210758 Flexistipes sinusarabici DSM 4947 10815444 YP_004603368.1 CDS Flexsi_1144 NC_015672.1 1210767 1211135 D PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; COGs: COG1200 RecG-like helicase; InterPro IPR011545:IPR001650:IPR014001:IPR004609; KEGG: cni:Calni_0994 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; aspartate 1-decarboxylase 1210767..1211135 Flexistipes sinusarabici DSM 4947 10815445 YP_004603369.1 CDS Flexsi_1145 NC_015672.1 1211644 1213941 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; KEGG: ddf:DEFDS_1216 hypothetical protein; SPTR: Putative uncharacterized protein; ATP-dependent DNA helicase RecG 1211644..1213941 Flexistipes sinusarabici DSM 4947 10815446 YP_004603370.1 CDS Flexsi_1146 NC_015672.1 1214162 1214707 D COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR011545:IPR001650:IPR018973:IPR014001; KEGG: dap:Dacet_1226 DEAD/DEAH box helicase domain protein; PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; hypothetical protein 1214162..1214707 Flexistipes sinusarabici DSM 4947 10815447 YP_004603371.1 CDS Flexsi_1147 NC_015672.1 1214719 1217601 R PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284; KEGG: ddf:DEFDS_1924 DNA-directed RNA polymerase sigma 70 factor; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; hypothetical protein complement(1214719..1217601) Flexistipes sinusarabici DSM 4947 10815448 YP_004603372.1 CDS Flexsi_1148 NC_015672.1 1217651 1218601 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176:IPR003959:IPR013093:IPR019489:IPR 003593:IPR017730; KEGG: ddf:DEFDS_1925 ATP-dependent Clp protease ATP-binding subunit ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: Chaperonin ClpB; RpoD subfamily RNA polymerase sigma-70 subunit complement(1217651..1218601) Flexistipes sinusarabici DSM 4947 10815449 YP_004603373.1 CDS Flexsi_1149 NC_015672.1 1218702 1221299 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: ddf:DEFDS_1926 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family; ATP-dependent chaperone ClpB complement(1218702..1221299) Flexistipes sinusarabici DSM 4947 10815450 YP_004603374.1 CDS Flexsi_1150 NC_015672.1 1221313 1221696 R PFAM: MerR family regulatory protein; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone protein dnaJ; InterPro IPR001623:IPR001305:IPR002939:IPR012724; KEGG: ddf:DEFDS_1927 molecular chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ 1; TIGRFAM: Chaperone DnaJ; MerR family transcriptional regulator complement(1221313..1221696) Flexistipes sinusarabici DSM 4947 10815451 YP_004603375.1 CDS Flexsi_1151 NC_015672.1 1221707 1222819 R PFAM: DnaJ central domain (4 repeats); DnaJ domain; DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1928 heat shock protein Hsp20; PFAM: Heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; chaperone protein dnaJ complement(1221707..1222819) Flexistipes sinusarabici DSM 4947 10815452 YP_004603376.1 CDS Flexsi_1152 NC_015672.1 1222831 1223271 R PFAM: Hsp20/alpha crystallin family; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: ddf:DEFDS_1460 hypothetical protein; PFAM: Gram-negative bacterial tonB protein; SPTR: Putative uncharacterized protein; TIGRFAM: TonB, C-terminal; heat shock protein Hsp20 complement(1222831..1223271) Flexistipes sinusarabici DSM 4947 10815453 YP_004603377.1 CDS Flexsi_1153 NC_015672.1 1223468 1224313 D PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR002804; KEGG: ddf:DEFDS_1459 hypothetical protein; PFAM: Archease, tRNA m5C methyltransferase chaperone; SPTR: Putative uncharacterized protein; TonB family protein 1223468..1224313 Flexistipes sinusarabici DSM 4947 10815454 YP_004603378.1 CDS Flexsi_1154 NC_015672.1 1224313 1224714 D PFAM: Archease protein family (DUF101/UPF0211); KEGG: ddf:DEFDS_0820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1224313..1224714 Flexistipes sinusarabici DSM 4947 10815455 YP_004603379.1 CDS Flexsi_1155 NC_015672.1 1224728 1225234 D KEGG: ddf:DEFDS_0821 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 1224728..1225234 Flexistipes sinusarabici DSM 4947 10815456 YP_004603380.1 CDS Flexsi_1156 NC_015672.1 1225258 1225605 R PFAM: Class III cytochrome C family; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; multiheme C-type cytochrome complement(1225258..1225605) Flexistipes sinusarabici DSM 4947 10815457 YP_004603381.1 CDS Flexsi_1157 NC_015672.1 1225878 1227197 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(1225878..1227197) Flexistipes sinusarabici DSM 4947 10815458 YP_004603382.1 CDS Flexsi_1159 NC_015672.1 1228685 1230646 D PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361:IPR000257; KEGG: ddf:DEFDS_0318 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE; primosomal protein N' 1228685..1230646 Flexistipes sinusarabici DSM 4947 10815460 YP_004603383.1 CDS Flexsi_1160 NC_015672.1 1230995 1232014 D PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; methyltransferase, MtaA/CmuA family; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: ddf:DEFDS_0319 ferrochelatase; PFAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase; uroporphyrinogen decarboxylase 1230995..1232014 Flexistipes sinusarabici DSM 4947 10815461 YP_004603384.1 CDS Flexsi_1161 NC_015672.1 1232007 1232960 D PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: ddf:DEFDS_0320 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; ferrochelatase 1232007..1232960 Flexistipes sinusarabici DSM 4947 10815462 YP_004603385.1 CDS Flexsi_1162 NC_015672.1 1232960 1233820 D PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR003382:IPR004507; KEGG: dap:Dacet_1255 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; 4-hydroxybenzoate polyprenyltransferase 1232960..1233820 Flexistipes sinusarabici DSM 4947 10815463 YP_004603386.1 CDS Flexsi_1163 NC_015672.1 1233817 1234392 D PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; KEGG: ddf:DEFDS_0322 hypothetical protein; SPTR: Putative uncharacterized protein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1233817..1234392 Flexistipes sinusarabici DSM 4947 10815464 YP_004603387.1 CDS Flexsi_1164 NC_015672.1 1234405 1234818 D KEGG: ddf:DEFDS_0323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1234405..1234818 Flexistipes sinusarabici DSM 4947 10815465 YP_004603388.1 CDS Flexsi_1165 NC_015672.1 1234828 1235265 D KEGG: ddf:DEFDS_0325 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1234828..1235265 Flexistipes sinusarabici DSM 4947 10815466 YP_004603389.1 CDS Flexsi_1166 NC_015672.1 1235302 1235754 D KEGG: cni:Calni_0442 cytochrome c family protein; SPTR: Cytochrome c family protein; hypothetical protein 1235302..1235754 Flexistipes sinusarabici DSM 4947 10815467 YP_004603390.1 CDS Flexsi_1167 NC_015672.1 1235773 1236117 R COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: ddf:DEFDS_0197 hypothetical protein; PFAM: Protein of unknown function DUF752; SPTR: Putative uncharacterized protein; cytochrome c family protein complement(1235773..1236117) Flexistipes sinusarabici DSM 4947 10815468 YP_004603391.1 CDS Flexsi_1168 NC_015672.1 1236311 1237006 R PFAM: Protein of unknown function (DUF752); COGs: COG0029 Aspartate oxidase; InterPro IPR003953:IPR004112:IPR005288; KEGG: cni:Calni_1125 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: L-aspartate oxidase; SPTR: L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; hypothetical protein complement(1236311..1237006) Flexistipes sinusarabici DSM 4947 10815469 YP_004603392.1 CDS Flexsi_1169 NC_015672.1 1236978 1238540 R PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; KEGG: ddf:DEFDS_0199 hypothetical protein; SPTR: Putative uncharacterized protein; L-aspartate oxidase complement(1236978..1238540) Flexistipes sinusarabici DSM 4947 10815470 YP_004603393.1 CDS Flexsi_1170 NC_015672.1 1238541 1239266 R InterPro IPR007197; KEGG: dap:Dacet_0745 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; hypothetical protein complement(1238541..1239266) Flexistipes sinusarabici DSM 4947 10815471 YP_004603394.1 CDS Flexsi_1171 NC_015672.1 1239266 1240447 R COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: ddf:DEFDS_0201 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; radical SAM protein complement(1239266..1240447) Flexistipes sinusarabici DSM 4947 10815472 YP_004603395.1 CDS Flexsi_1172 NC_015672.1 1240811 1242100 D PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: ddf:DEFDS_1140 peptidase M29, aminopeptidase II; PFAM: Peptidase M29, aminopeptidase II; SPTR: Peptidase M29, aminopeptidase II; enolase 1240811..1242100 Flexistipes sinusarabici DSM 4947 10815473 YP_004603396.1 CDS Flexsi_1173 NC_015672.1 1242191 1243294 D PFAM: Thermophilic metalloprotease (M29); COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: cni:Calni_0866 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; peptidase M29 aminopeptidase II 1242191..1243294 Flexistipes sinusarabici DSM 4947 10815474 YP_004603397.1 CDS Flexsi_1174 NC_015672.1 1243384 1244580 D PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; InterPro IPR010395; KEGG: ddf:DEFDS_1625 cytoplasmic chaperone TorD; SPTR: Cytoplasmic chaperone TorD; ribonuclease BN 1243384..1244580 Flexistipes sinusarabici DSM 4947 10815475 YP_004603398.1 CDS Flexsi_1175 NC_015672.1 1244715 1245437 D PFAM: Nitrate reductase delta subunit; KEGG: ddf:DEFDS_1624 cytochrome c family protein; SPTR: Cytochrome c family protein; cytoplasmic chaperone TorD 1244715..1245437 Flexistipes sinusarabici DSM 4947 10815476 YP_004603399.1 CDS Flexsi_1176 NC_015672.1 1245511 1245864 D KEGG: ddf:DEFDS_1623 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome c family protein 1245511..1245864 Flexistipes sinusarabici DSM 4947 10815477 YP_004603400.1 CDS Flexsi_1177 NC_015672.1 1246015 1247832 D PFAM: Protein of unknown function (DUF3373); COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cni:Calni_0613 transcriptional regulator, badm/rrf2 family; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; hypothetical protein 1246015..1247832 Flexistipes sinusarabici DSM 4947 10815478 YP_004603401.1 CDS Flexsi_1178 NC_015672.1 1247937 1248341 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: dvl:Dvul_1399 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; BadM/Rrf2 family transcriptional regulator complement(1247937..1248341) Flexistipes sinusarabici DSM 4947 10815479 YP_004603402.1 CDS Flexsi_1179 NC_015672.1 1248424 1249212 R PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase complement(1248424..1249212) Flexistipes sinusarabici DSM 4947 10815480 YP_004603403.1 CDS Flexsi_1180 NC_015672.1 1249621 1250748 D PFAM: Aminotransferase class I and II; InterPro IPR002145; PFAM: CopG-like DNA-binding; aspartate transaminase 1249621..1250748 Flexistipes sinusarabici DSM 4947 10815482 YP_004603404.1 CDS Flexsi_1181 NC_015672.1 1250975 1251199 D PFAM: Ribbon-helix-helix protein, copG family; COGs: COG2206 HD-GYP domain; InterPro IPR001789:IPR006674:IPR003607:IPR006675; KEGG: ddf:DEFDS_1712 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; SMART: Metal-dependent phosphohydrolase, HD region; Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; TIGRFAM: HDIG; CopG family transcriptional regulator 1250975..1251199 Flexistipes sinusarabici DSM 4947 10815483 YP_004603405.1 CDS Flexsi_1182 NC_015672.1 1251196 1252608 D PFAM: HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; response regulator receiver modulated metal dependent phosphohydrolase 1251196..1252608 Flexistipes sinusarabici DSM 4947 10815484 YP_004603406.1 CDS Flexsi_1183 NC_015672.1 1253621 1254640 D PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR011912; KEGG: ddf:DEFDS_0970 ADP-glyceromanno-heptose 6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: ADP-glyceromanno-heptose 6-epimerase; SPTR: ADP-glyceromanno-heptose 6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; aspartate-semialdehyde dehydrogenase 1253621..1254640 Flexistipes sinusarabici DSM 4947 10815487 YP_004603407.1 CDS Flexsi_1184 NC_015672.1 1254764 1255729 D PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; COGs: COG1586 S-adenosylmethionine decarboxylase; HAMAP: S-adenosylmethionine decarboxylase proenzyme; InterPro IPR003826:IPR017716; KEGG: ddf:DEFDS_0969 adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; PRIAM: Adenosylmethionine decarboxylase; SPTR: S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; ADP-L-glycero-D-manno-heptose-6-epimerase 1254764..1255729 Flexistipes sinusarabici DSM 4947 10815488 YP_004603408.1 CDS Flexsi_1185 NC_015672.1 1255924 1256313 D PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form; COGs: COG1945 conserved hypothetical protein; HAMAP: Pyruvoyl-dependent arginine decarboxylase; InterPro IPR002724; KEGG: mvu:Metvu_0499 pyruvoyl-dependent arginine decarboxylase; PFAM: Pyruvoyl-dependent arginine decarboxylase; PRIAM: Arginine decarboxylase; SPTR: Pyruvoyl-dependent arginine decarboxylase; TIGRFAM: Pyruvoyl-dependent arginine decarboxylase; S-adenosylmethionine decarboxylase 1255924..1256313 Flexistipes sinusarabici DSM 4947 10815489 YP_004603409.1 CDS Flexsi_1186 NC_015672.1 1256329 1256796 D PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; COGs: COG0421 Spermidine synthase; HAMAP: Spermidine synthase; InterPro IPR001045; KEGG: ddf:DEFDS_0968 spermidine synthase; PFAM: Spermine synthase; SPTR: Spermidine synthase; TIGRFAM: Spermine synthase; pyruvoyl-dependent arginine decarboxylase 1256329..1256796 Flexistipes sinusarabici DSM 4947 10815490 YP_004603410.1 CDS Flexsi_1187 NC_015672.1 1256865 1257710 D PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035:IPR005925; KEGG: ddf:DEFDS_0967 agmatinase; PFAM: Ureohydrolase; PRIAM: Agmatinase; SPTR: Agmatinase; TIGRFAM: Putative agmatinase; spermidine synthase 1256865..1257710 Flexistipes sinusarabici DSM 4947 10815491 YP_004603411.1 CDS Flexsi_1188 NC_015672.1 1257694 1258530 D PFAM: Arginase family; TIGRFAM: agmatinase; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: cni:Calni_1071 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; agmatinase 1257694..1258530 Flexistipes sinusarabici DSM 4947 10815492 YP_004603412.1 CDS Flexsi_1189 NC_015672.1 1258755 1259027 D PFAM: Bacterial DNA-binding protein; InterPro IPR001387:IPR013096; KEGG: cni:Calni_1070 helix-turn-helix domain protein; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; histone family protein DNA-binding protein 1258755..1259027 Flexistipes sinusarabici DSM 4947 10815493 YP_004603413.1 CDS Flexsi_1190 NC_015672.1 1259133 1259690 D PFAM: Cupin domain; Helix-turn-helix; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ddf:DEFDS_0964 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate-CoA ligase; cupin 1259133..1259690 Flexistipes sinusarabici DSM 4947 10815494 YP_004603414.1 CDS Flexsi_1191 NC_015672.1 1260055 1261353 D PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase; COGs: COG4747 ACT domain-containing protein; InterPro IPR002912; KEGG: ddf:DEFDS_0963 hypothetical protein; PFAM: Amino acid-binding ACT; SPTR: Putative uncharacterized protein; phenylacetate--CoA ligase 1260055..1261353 Flexistipes sinusarabici DSM 4947 10815495 YP_004603415.1 CDS Flexsi_1192 NC_015672.1 1261370 1261801 D PFAM: ACT domain; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_0962 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; amino acid-binding ACT domain-containing protein 1261370..1261801 Flexistipes sinusarabici DSM 4947 10815496 YP_004603416.1 CDS Flexsi_1193 NC_015672.1 1261819 1262943 D PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_0962 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor 1261819..1262943 Flexistipes sinusarabici DSM 4947 10815497 YP_004603417.1 CDS Flexsi_1194 NC_015672.1 1263089 1264210 D PFAM: Receptor family ligand binding region; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cni:Calni_0893 amino acid/amide abc transporter membrane protein 1, haat family; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid/amide ABC transporter membrane protein 1, HAAT family; extracellular ligand-binding receptor 1263089..1264210 Flexistipes sinusarabici DSM 4947 10815498 YP_004603418.1 CDS Flexsi_1195 NC_015672.1 1264211 1265074 D PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: cni:Calni_0894 amino acid/amide abc transporter membrane protein 2, haat family; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid/amide ABC transporter membrane protein 2, HAAT family; ABC transporter 1264211..1265074 Flexistipes sinusarabici DSM 4947 10815499 YP_004603419.1 CDS Flexsi_1196 NC_015672.1 1265071 1266012 D PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0895 amino acid/amide abc transporter ATP-binding protein 1, haat family; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; ABC transporter 1265071..1266012 Flexistipes sinusarabici DSM 4947 10815500 YP_004603420.1 CDS Flexsi_1197 NC_015672.1 1265999 1266751 D PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0896 amino acid/amide abc transporter ATP-binding protein 2, haat family; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; monosaccharide-transporting ATPase 1265999..1266751 Flexistipes sinusarabici DSM 4947 10815501 YP_004603421.1 CDS Flexsi_1198 NC_015672.1 1266744 1267469 D PFAM: ABC transporter; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ddf:DEFDS_0957 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate-CoA ligase; phosphonate-transporting ATPase 1266744..1267469 Flexistipes sinusarabici DSM 4947 10815502 YP_004603422.1 CDS Flexsi_1199 NC_015672.1 1267474 1268775 D PFAM: AMP-binding enzyme; COGs: COG1896 hydrolase of HD superfamily; InterPro IPR006674; KEGG: ddf:DEFDS_0956 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Putative uncharacterized protein; phenylacetate--CoA ligase 1267474..1268775 Flexistipes sinusarabici DSM 4947 10815503 YP_004603423.1 CDS Flexsi_1200 NC_015672.1 1268768 1269361 D KEGG: cni:Calni_0899 hypothetical protein; SPTR: Putative uncharacterized protein; metal dependent phosphohydrolase 1268768..1269361 Flexistipes sinusarabici DSM 4947 10815504 YP_004603424.1 CDS Flexsi_1201 NC_015672.1 1269330 1269869 D COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841:IPR008170:IPR004633; KEGG: ddf:DEFDS_0081 Na:phosphate symporter; PFAM: Na/Pi-cotransporter; PhoU; SPTR: Na:phosphate symporter; TIGRFAM: Na/Pi co-transporter II-related; hypothetical protein 1269330..1269869 Flexistipes sinusarabici DSM 4947 10815505 YP_004603425.1 CDS Flexsi_1202 NC_015672.1 1270352 1272004 D PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: ddf:DEFDS_1930 phosphatase Ppx/GppA family; PFAM: Ppx/GppA phosphatase; SPTR: Phosphatase, Ppx/GppA family; Na/Pi-cotransporter II-like protein 1270352..1272004 Flexistipes sinusarabici DSM 4947 10815506 YP_004603426.1 CDS Flexsi_1203 NC_015672.1 1272004 1272915 D PFAM: Ppx/GppA phosphatase family; COGs: COG4399 conserved hypothetical protein; InterPro IPR007383; KEGG: ddf:DEFDS_1931 hypothetical protein; PFAM: Protein of unknown function DUF445, transmembrane; SPTR: Putative uncharacterized protein; Ppx/GppA phosphatase 1272004..1272915 Flexistipes sinusarabici DSM 4947 10815507 YP_004603427.1 CDS Flexsi_1204 NC_015672.1 1272896 1274425 D PFAM: Protein of unknown function (DUF445); COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: ddf:DEFDS_1002 peptidase M50 family; PFAM: Peptidase M50; SPTR: Peptidase, M50 family; hypothetical protein 1272896..1274425 Flexistipes sinusarabici DSM 4947 10815508 YP_004603428.1 CDS Flexsi_1205 NC_015672.1 1274650 1275285 D PFAM: Peptidase family M50; COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305:IPR002306; KEGG: ddf:DEFDS_1003 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; peptidase M50 1274650..1275285 Flexistipes sinusarabici DSM 4947 10815509 YP_004603429.1 CDS Flexsi_1206 NC_015672.1 1275300 1276280 D PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; COGs: COG1354 conserved hypothetical protein; HAMAP: Segregation and condensation protein A; InterPro IPR003768; KEGG: dap:Dacet_1364 chromosome segregation and condensation protein ScpA; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; SPTR: Chromosome segregation and condensation protein ScpA; tryptophanyl-tRNA synthetase 1275300..1276280 Flexistipes sinusarabici DSM 4947 10815510 YP_004603430.1 CDS Flexsi_1207 NC_015672.1 1276277 1276984 D PFAM: ScpA/B protein; COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: dap:Dacet_1365 chromosome segregation and condensation protein, ScpB; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; SPTR: Chromosome segregation and condensation protein, ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; segregation and condensation protein A 1276277..1276984 Flexistipes sinusarabici DSM 4947 10815511 YP_004603431.1 CDS Flexsi_1208 NC_015672.1 1276974 1277492 D PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: dap:Dacet_1366 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; chromosome segregation and condensation protein ScpB 1276974..1277492 Flexistipes sinusarabici DSM 4947 10815512 YP_004603432.1 CDS Flexsi_1209 NC_015672.1 1277468 1278190 D PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: ddf:DEFDS_1007 6-pyruvoyl-tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl-tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; pseudouridine synthase Rsu 1277468..1278190 Flexistipes sinusarabici DSM 4947 10815513 YP_004603433.1 CDS Flexsi_1210 NC_015672.1 1278183 1278542 D PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: ddf:DEFDS_1008 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; queuosine biosynthesis protein QueD 1278183..1278542 Flexistipes sinusarabici DSM 4947 10815514 YP_004603434.1 CDS Flexsi_1211 NC_015672.1 1278535 1279242 D PFAM: Radical SAM superfamily; InterPro IPR013105:IPR001440:IPR019734; KEGG: ddf:DEFDS_1009 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; radical SAM protein 1278535..1279242 Flexistipes sinusarabici DSM 4947 10815515 YP_004603435.1 CDS Flexsi_1212 NC_015672.1 1279239 1281608 D COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); InterPro IPR011579:IPR003593; KEGG: ddf:DEFDS_1010 general secretion pathway protein A; SMART: ATPase, AAA+ type, core; SPTR: General secretion pathway protein A; hypothetical protein 1279239..1281608 Flexistipes sinusarabici DSM 4947 10815516 YP_004603436.1 CDS Flexsi_1213 NC_015672.1 1281640 1282458 D PFAM: Archaeal ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003660:IPR003661:IPR003594; KEGG: dap:Dacet_1368 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; AAA ATPase 1281640..1282458 Flexistipes sinusarabici DSM 4947 10815517 YP_004603437.1 CDS Flexsi_1214 NC_015672.1 1282503 1284668 D PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_1012 two-component, sigma54 specific, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component, sigma54 specific, transcriptional regulator; integral membrane sensor signal transduction histidine kinase 1282503..1284668 Flexistipes sinusarabici DSM 4947 10815518 YP_004603438.1 CDS Flexsi_1215 NC_015672.1 1284649 1286031 D PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135:IPR005720; KEGG: cni:Calni_1008 dihydroorotate oxidase B, catalytic subunit; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; Fis family two component sigma-54 specific transcriptional regulator 1284649..1286031 Flexistipes sinusarabici DSM 4947 10815519 YP_004603439.1 CDS Flexsi_1216 NC_015672.1 1286221 1287135 R PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR001433:IPR019480; KEGG: ddf:DEFDS_1218 dihydroorotate dehydrogenase electron transfer subunit; PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Dihydroorotate dehydrogenase electron transfer subunit; dihydroorotate dehydrogenase family protein complement(1286221..1287135) Flexistipes sinusarabici DSM 4947 10815520 YP_004603440.1 CDS Flexsi_1217 NC_015672.1 1287132 1287932 R PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR005481:IPR005479:IPR005480:IPR011607:IPR 012607:IPR006275; KEGG: ddf:DEFDS_1217 carbamoylphosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; Ribosomal protein S22; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Carbamoyl-phosphate synthase large chain; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; oxidoreductase FAD/NAD(P)-binding domain-containing protein complement(1287132..1287932) Flexistipes sinusarabici DSM 4947 10815521 YP_004603441.1 CDS Flexsi_1218 NC_015672.1 1287949 1291185 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR000014; KEGG: cni:Calni_1645 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: Signal transduction histidine kinase, nitrogen specific, NtrB; carbamoyl-phosphate synthase large subunit complement(1287949..1291185) Flexistipes sinusarabici DSM 4947 10815522 YP_004603442.1 CDS Flexsi_1219 NC_015672.1 1291313 1292977 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: ddf:DEFDS_1111 type IV pilus assembly protein PilC; PFAM: Type II secretion system F domain; SPTR: Type IV pilus assembly protein PilC; multi-sensor signal transduction histidine kinase complement(1291313..1292977) Flexistipes sinusarabici DSM 4947 10815523 YP_004603443.1 CDS Flexsi_1220 NC_015672.1 1293029 1294240 R PFAM: Bacterial type II secretion system protein F domain; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482:IPR006321; KEGG: ddf:DEFDS_1110 twitching motility protein PilT; PFAM: Type II secretion system protein E; SPTR: Twitching motility protein PilT; TIGRFAM: Pilus retraction protein PilT; type II secretion system F domain-containing protein complement(1293029..1294240) Flexistipes sinusarabici DSM 4947 10815524 YP_004603444.1 CDS Flexsi_1221 NC_015672.1 1294320 1295417 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482:IPR003593:IPR013374; KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Type IV pilus assembly protein PilB; TIGRFAM: ATPase, type IV, pilus assembly, PilB; twitching motility protein complement(1294320..1295417) Flexistipes sinusarabici DSM 4947 10815525 YP_004603445.1 CDS Flexsi_1222 NC_015672.1 1295510 1297207 R PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; COGs: COG0169 Shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; InterPro IPR013708:IPR006151:IPR011342; KEGG: ddf:DEFDS_1108 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Shikimate 5-dehydrogenase; TIGRFAM: Quinate/shikimate 5-dehydrogenase; type IV-A pilus assembly ATPase PilB complement(1295510..1297207) Flexistipes sinusarabici DSM 4947 10815526 YP_004603446.1 CDS Flexsi_1223 NC_015672.1 1297209 1298048 R PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: ddf:DEFDS_1107 hypothetical protein; PFAM: Protein of unknown function DUF502; SPTR: Putative uncharacterized protein; shikimate dehydrogenase complement(1297209..1298048) Flexistipes sinusarabici DSM 4947 10815527 YP_004603447.1 CDS Flexsi_1224 NC_015672.1 1298075 1298722 R PFAM: Protein of unknown function (DUF502); COGs: COG1584 membrane protein; InterPro IPR000791; KEGG: ddf:DEFDS_0518 hypothetical protein; PFAM: GPR1/FUN34/yaaH; SPTR: Putative uncharacterized protein; hypothetical protein complement(1298075..1298722) Flexistipes sinusarabici DSM 4947 10815528 YP_004603448.1 CDS Flexsi_1225 NC_015672.1 1298859 1299518 R PFAM: GPR1/FUN34/yaaH family; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR001450:IPR002932; KEGG: ddf:DEFDS_1016 hypothetical protein; PFAM: Glutamate synthase, central-C; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Glutamate synthase (NADPH); SPTR: Putative uncharacterized protein; GPR1/FUN34/yaaH family protein complement(1298859..1299518) Flexistipes sinusarabici DSM 4947 10815529 YP_004603449.1 CDS Flexsi_1226 NC_015672.1 1300162 1302894 R PFAM: Conserved region in glutamate synthase; KEGG: ddf:DEFDS_1015 hypothetical protein; SPTR: Putative uncharacterized protein; glutamate synthase complement(1300162..1302894) Flexistipes sinusarabici DSM 4947 10815530 YP_004603450.1 CDS Flexsi_1227 NC_015672.1 1302881 1304092 R PFAM: Glutamine amidotransferases class-II; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027; KEGG: dap:Dacet_0101 glucose-inhibited division protein A; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: Glucose-inhibited division protein A; hypothetical protein complement(1302881..1304092) Flexistipes sinusarabici DSM 4947 10815531 YP_004603451.1 CDS Flexsi_1228 NC_015672.1 1304108 1305811 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1796 DNA polymerase IV (family X); InterPro IPR004013:IPR002054:IPR003141; KEGG: ddf:DEFDS_1013 DNA polymerase family X; PFAM: PHP, C-terminal; SMART: DNA-directed DNA polymerase, family X; Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase, family X; glutamate synthase complement(1304108..1305811) Flexistipes sinusarabici DSM 4947 10815532 YP_004603452.1 CDS Flexsi_1229 NC_015672.1 1305983 1307692 R PFAM: PHP domain; COGs: COG1896 hydrolase of HD superfamily; KEGG: sfu:Sfum_0396 HAD superfamily hydrolase; SPTR: Hydrolase (HAD superfamily); PHP domain-containing protein complement(1305983..1307692) Flexistipes sinusarabici DSM 4947 10815533 YP_004603453.1 CDS Flexsi_1230 NC_015672.1 1307708 1308892 R COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: azl:AZL_002460 TerC-like membrane protein; PFAM: Integral membrane protein TerC; SPTR: TerC-like membrane protein; HAD superfamily hydrolase complement(1307708..1308892) Flexistipes sinusarabici DSM 4947 10815534 YP_004603454.1 CDS Flexsi_1231 NC_015672.1 1308905 1309624 R PFAM: Integral membrane protein TerC family; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: ant:Arnit_0124 family 7 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; integral membrane protein TerC complement(1308905..1309624) Flexistipes sinusarabici DSM 4947 10815535 YP_004603455.1 CDS Flexsi_1232 NC_015672.1 1309836 1310915 R PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: trap dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; family 7 extracellular solute-binding protein complement(1309836..1310915) Flexistipes sinusarabici DSM 4947 10815536 YP_004603456.1 CDS Flexsi_1233 NC_015672.1 1311146 1312489 R PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ant:Arnit_0123 tripartite ATP-independent periplasmic transporter subunit DctQ; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP dicarboxylate transporter subunit DctM complement(1311146..1312489) Flexistipes sinusarabici DSM 4947 10815537 YP_004603457.1 CDS Flexsi_1234 NC_015672.1 1312489 1313034 R PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: ant:Arnit_0124 family 7 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; tripartite AtP-independent periplasmic transporter subunit DctQ complement(1312489..1313034) Flexistipes sinusarabici DSM 4947 10815538 YP_004603458.1 CDS Flexsi_1235 NC_015672.1 1313146 1314219 R PFAM: Bacterial extracellular solute-binding protein, family 7; InterPro IPR000866; KEGG: cni:Calni_0068 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; family 7 extracellular solute-binding protein complement(1313146..1314219) Flexistipes sinusarabici DSM 4947 10815539 YP_004603459.1 CDS Flexsi_1236 NC_015672.1 1314733 1315170 D PFAM: AhpC/TSA family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR002912; KEGG: ddf:DEFDS_1490 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein; alkyl hydroperoxide reductase 1314733..1315170 Flexistipes sinusarabici DSM 4947 10815540 YP_004603460.1 CDS Flexsi_1237 NC_015672.1 1315179 1315856 R PFAM: CBS domain; ACT domain; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: cni:Calni_1820 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Phenylacetate-CoA ligase; hypothetical protein complement(1315179..1315856) Flexistipes sinusarabici DSM 4947 10815541 YP_004603461.1 CDS Flexsi_1238 NC_015672.1 1315865 1317022 R PFAM: AMP-binding enzyme; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_1821 amino acid/amide abc transporter ATP-binding protein 2, haat family; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; AMP-dependent synthetase and ligase complement(1315865..1317022) Flexistipes sinusarabici DSM 4947 10815542 YP_004603462.1 CDS Flexsi_1239 NC_015672.1 1317010 1317795 R PFAM: ABC transporter; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_1493 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; ABC transporter-like protein complement(1317010..1317795) Flexistipes sinusarabici DSM 4947 10815543 YP_004603463.1 CDS Flexsi_1240 NC_015672.1 1317795 1318940 R COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_1494 branched-chain amino acid ABC transporter permease; PFAM: Bacterial inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; extracellular ligand-binding receptor complement(1317795..1318940) Flexistipes sinusarabici DSM 4947 10815544 YP_004603464.1 CDS Flexsi_1241 NC_015672.1 1319004 1320056 R PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cni:Calni_1824 amino acid/amide abc transporter membrane protein 1, haat family; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid/amide ABC transporter membrane protein 1, HAAT family; ABC transporter complement(1319004..1320056) Flexistipes sinusarabici DSM 4947 10815545 YP_004603465.1 CDS Flexsi_1242 NC_015672.1 1320053 1320940 R PFAM: Branched-chain amino acid transport system / permease component; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: cni:Calni_1825 amp-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: AMP-dependent synthetase and ligase; ABC transporter complement(1320053..1320940) Flexistipes sinusarabici DSM 4947 10815546 YP_004603466.1 CDS Flexsi_1243 NC_015672.1 1320937 1322841 R PFAM: AMP-binding enzyme; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_1826 amino acid/amide abc transporter ATP-binding protein 1, haat family; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; long-chain-fatty-acid--CoA ligase complement(1320937..1322841) Flexistipes sinusarabici DSM 4947 10815547 YP_004603467.1 CDS Flexsi_1244 NC_015672.1 1322832 1323614 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: ddf:DEFDS_1296 hypothetical protein; SPTR: Putative uncharacterized protein; sulfate-transporting ATPase complement(1322832..1323614) Flexistipes sinusarabici DSM 4947 10815548 YP_004603468.1 CDS Flexsi_1245 NC_015672.1 1323839 1325554 D PFAM: Protein of unknown function, DUF255; KEGG: ddf:DEFDS_1290 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1323839..1325554 Flexistipes sinusarabici DSM 4947 10815549 YP_004603469.1 CDS Flexsi_1246 NC_015672.1 1325903 1326172 D PFAM: Membrane protein of unknown function (DUF340); COGs: COG2431 membrane protein; InterPro IPR005642; KEGG: ddf:DEFDS_1289 hypothetical protein; PFAM: Protein of unknown function DUF340, prokaryotic membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1325903..1326172 Flexistipes sinusarabici DSM 4947 10815550 YP_004603470.1 CDS Flexsi_1247 NC_015672.1 1326169 1326762 D PFAM: Membrane protein of unknown function (DUF340); COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ddf:DEFDS_1457 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; hypothetical protein 1326169..1326762 Flexistipes sinusarabici DSM 4947 10815551 YP_004603471.1 CDS Flexsi_1248 NC_015672.1 1326769 1327848 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; KEGG: dap:Dacet_2935 transcriptional regulator, TraR/DksA family; SPTR: Transcriptional regulator, TraR/DksA family; radical SAM protein complement(1326769..1327848) Flexistipes sinusarabici DSM 4947 10815552 YP_004603472.1 CDS Flexsi_1249 NC_015672.1 1327969 1328316 R PFAM: Prokaryotic dksA/traR C4-type zinc finger; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: dap:Dacet_2435 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; TraR/DksA family transcriptional regulator complement(1327969..1328316) Flexistipes sinusarabici DSM 4947 10815553 YP_004603473.1 CDS Flexsi_1250 NC_015672.1 1328337 1329059 R PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR005892:IPR003439:IPR000644:IPR003593; KEGG: dap:Dacet_2436 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core; SPTR: Glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; ABC transporter complement(1328337..1329059) Flexistipes sinusarabici DSM 4947 10815554 YP_004603474.1 CDS Flexsi_1251 NC_015672.1 1329043 1330131 R PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: dap:Dacet_2437 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; glycine betaine/L-proline ABC transporter ATPase complement(1329043..1330131) Flexistipes sinusarabici DSM 4947 10815555 YP_004603475.1 CDS Flexsi_1252 NC_015672.1 1330118 1331320 R PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); InterPro IPR007210; KEGG: dap:Dacet_2438 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; manually curated; ABC transporter complement(1330118..1331320) Flexistipes sinusarabici DSM 4947 10815556 YP_004603476.1 CDS Flexsi_1253 NC_015672.1 1331304 1332245 R PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; glycine betaine ABC transporter periplasmic subunit complement(1331304..1332245) Flexistipes sinusarabici DSM 4947 10815557 YP_004603477.1 CDS Flexsi_1254 NC_015672.1 1332401 1334236 D PFAM: Transposase DDE domain; KEGG: pin:Ping_0589 cyclic-di-GMP regulatory protein; SPTR: Regulatory protein for cyclic-di-GMP, EAL/GGDEF domains; transposase IS4 family protein 1332401..1334236 Flexistipes sinusarabici DSM 4947 10815558 YP_004603478.1 CDS Flexsi_1255 NC_015672.1 1334305 1334520 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; cyclic-di-GMP regulatory protein complement(1334305..1334520) Flexistipes sinusarabici DSM 4947 10815559 YP_004603479.1 CDS Flexsi_1256 NC_015672.1 1334719 1335615 R PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase complement(1334719..1335615) Flexistipes sinusarabici DSM 4947 10815560 YP_004603480.1 CDS Flexsi_1257 NC_015672.1 1336011 1336751 R PFAM: EamA-like transporter family; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein complement(1336011..1336751) Flexistipes sinusarabici DSM 4947 10815562 YP_004603481.1 CDS Flexsi_1258 NC_015672.1 1336867 1337916 D PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein 1336867..1337916 Flexistipes sinusarabici DSM 4947 10815563 YP_004603482.1 CDS Flexsi_1260 NC_015672.1 1338242 1338481 R COGs: COG0268 Ribosomal protein S20; HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: ddf:DEFDS_1532 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; hypothetical protein complement(1338242..1338481) Flexistipes sinusarabici DSM 4947 10815565 YP_004603483.1 CDS Flexsi_1261 NC_015672.1 1338521 1338796 R PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; InterPro IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; SPTR: Pilin inverting protein, putative; 30S ribosomal protein S20 complement(1338521..1338796) Flexistipes sinusarabici DSM 4947 10815566 YP_004603484.1 CDS Flexsi_1262 NC_015672.1 1339301 1339741 R PFAM: Transposase IS116/IS110/IS902 family; InterPro IPR002525; KEGG: tye:THEYE_A1667 pilin inverting protein, putative; PFAM: Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; transposase IS116/IS110/IS902 family protein complement(1339301..1339741) Flexistipes sinusarabici DSM 4947 10815567 YP_004603485.1 CDS Flexsi_1263 NC_015672.1 1339789 1340313 R PFAM: Transposase; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; transposase IS111A/IS1328/IS1533 complement(1339789..1340313) Flexistipes sinusarabici DSM 4947 10815568 YP_004603486.1 CDS Flexsi_1264 NC_015672.1 1340659 1342026 D PFAM: Transposase domain (DUF772); COGs: COG4123 O-methyltransferase; InterPro IPR007848; KEGG: ddf:DEFDS_1884 SAM-dependent methyltransferase; PFAM: Methyltransferase small; SPTR: SAM-dependent methyltransferase; transposase IS4 family protein 1340659..1342026 Flexistipes sinusarabici DSM 4947 10815569 YP_004603487.1 CDS Flexsi_1265 NC_015672.1 1342544 1343260 R PFAM: Methyltransferase small domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR013767:IPR003661:IPR003594:IPR 001789; KEGG: ppd:Ppro_2598 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; methyltransferase small complement(1342544..1343260) Flexistipes sinusarabici DSM 4947 10815570 YP_004603488.1 CDS Flexsi_1266 NC_015672.1 1343247 1346261 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase complement(1343247..1346261) Flexistipes sinusarabici DSM 4947 10815571 YP_004603489.1 CDS Flexsi_1267 NC_015672.1 1346742 1346930 D InterPro IPR007712; KEGG: mrb:Mrub_0782 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system; hypothetical protein 1346742..1346930 Flexistipes sinusarabici DSM 4947 10815572 YP_004603490.1 CDS Flexsi_1268 NC_015672.1 1346923 1347177 D PFAM: Plasmid stabilisation system protein; plasmid stabilization system 1346923..1347177 Flexistipes sinusarabici DSM 4947 10815573 YP_004603491.1 CDS Flexsi_1269 NC_015672.1 1347960 1349114 R PFAM: Peptidase family M23; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: cni:Calni_0279 SNARE associated golgi protein-related protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-related protein; peptidase M23 complement(1347960..1349114) Flexistipes sinusarabici DSM 4947 10815576 YP_004603492.1 CDS Flexsi_1270 NC_015672.1 1349119 1349724 R PFAM: SNARE associated Golgi protein; COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604:IPR003395; KEGG: cni:Calni_0278 DNA repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; hypothetical protein complement(1349119..1349724) Flexistipes sinusarabici DSM 4947 10815577 YP_004603493.1 CDS Flexsi_1271 NC_015672.1 1349721 1351370 R PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; COGs: COG0061 sugar kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; InterPro IPR002504; KEGG: ddf:DEFDS_0942 NAD(+) kinase; PFAM: ATP-NAD/AcoX kinase; PRIAM: NAD(+) kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; DNA repair protein RecN complement(1349721..1351370) Flexistipes sinusarabici DSM 4947 10815578 YP_004603494.1 CDS Flexsi_1272 NC_015672.1 1351370 1352227 R PFAM: ATP-NAD kinase; COGs: COG1189 rRNA methylase; InterPro IPR004538:IPR002942:IPR002877; KEGG: ddf:DEFDS_0943 hemolysin A; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4; SMART: RNA-binding S4; SPTR: Hemolysin A; TIGRFAM: Haemolysin A; inorganic polyphosphate/ATP-NAD kinase complement(1351370..1352227) Flexistipes sinusarabici DSM 4947 10815579 YP_004603495.1 CDS Flexsi_1273 NC_015672.1 1352199 1353008 R PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005477:IPR005475:IPR005476; KEGG: ddf:DEFDS_0944 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase; hemolysin A complement(1352199..1353008) Flexistipes sinusarabici DSM 4947 10815580 YP_004603496.1 CDS Flexsi_1274 NC_015672.1 1352990 1354855 R PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: dap:Dacet_1901 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; 1-deoxy-D-xylulose-5-phosphate synthase complement(1352990..1354855) Flexistipes sinusarabici DSM 4947 10815581 YP_004603497.1 CDS Flexsi_1275 NC_015672.1 1355079 1355978 R PFAM: Polyprenyl synthetase; HAMAP: Exonuclease VII, small subunit; InterPro IPR003761; KEGG: ddf:DEFDS_0946 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; SPTR: Exodeoxyribonuclease 7 small subunit; TIGRFAM: Exonuclease VII, small subunit; polyprenyl synthetase complement(1355079..1355978) Flexistipes sinusarabici DSM 4947 10815582 YP_004603498.1 CDS Flexsi_1276 NC_015672.1 1355959 1356198 R PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; exodeoxyribonuclease 7 small subunit complement(1355959..1356198) Flexistipes sinusarabici DSM 4947 10815583 YP_004603499.1 CDS Flexsi_1277 NC_015672.1 1356574 1357632 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG2217 Cation transport ATPase; InterProIPR006416:IPR001757:IPR006121:IPR008250:IPR 005834; KEGG: cac:CA_C2241 cation transport P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Cation transport P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; transposase IS4 family protein complement(1356574..1357632) Flexistipes sinusarabici DSM 4947 10815584 YP_004603500.1 CDS Flexsi_1278 NC_015672.1 1357857 1359944 R PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: fno:Fnod_0771 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR; heavy metal translocating P-type ATPase complement(1357857..1359944) Flexistipes sinusarabici DSM 4947 10815585 YP_004603501.1 CDS Flexsi_1279 NC_015672.1 1359948 1360244 R PFAM: Bacterial regulatory protein, arsR family; manually curated; ArsR family transcriptional regulator complement(1359948..1360244) Flexistipes sinusarabici DSM 4947 10815586 YP_004603502.1 CDS Flexsi_1281 NC_015672.1 1361418 1361804 D PFAM: ABC transporter; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Probable transposase; ABC transporter-like protein 1361418..1361804 Flexistipes sinusarabici DSM 4947 10815588 YP_004603503.1 CDS Flexsi_1282 NC_015672.1 1362003 1362977 R PFAM: Transposase DDE domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein complement(1362003..1362977) Flexistipes sinusarabici DSM 4947 10815589 YP_004603504.1 CDS Flexsi_1283 NC_015672.1 1363059 1364108 D PFAM: Transposase DDE domain; Transposase domain (DUF772); KEGG: sun:SUN_1938 hypothetical protein; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 1363059..1364108 Flexistipes sinusarabici DSM 4947 10815590 YP_004603505.1 CDS Flexsi_1284 NC_015672.1 1364262 1364663 R manually curated; hypothetical protein complement(1364262..1364663) Flexistipes sinusarabici DSM 4947 10815591 YP_004603506.1 CDS Flexsi_1286 NC_015672.1 1365024 1367519 D PFAM: Predicted permease; COGs: COG0021 Transketolase; InterPro IPR005474:IPR005475:IPR005476; KEGG: ddf:DEFDS_0073 hypothetical protein; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: Putative uncharacterized protein; hypothetical protein 1365024..1367519 Flexistipes sinusarabici DSM 4947 10815593 YP_004603507.1 CDS Flexsi_1287 NC_015672.1 1367750 1369672 D PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_0658 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; transketolase domain-containing protein 1367750..1369672 Flexistipes sinusarabici DSM 4947 10815594 YP_004603508.1 CDS Flexsi_1288 NC_015672.1 1369927 1370652 R PFAM: ABC transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dat:HRM2_04920 LivG2; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: LivG2; Fe(3+)-transporting ATPase complement(1369927..1370652) Flexistipes sinusarabici DSM 4947 10815595 YP_004603509.1 CDS Flexsi_1289 NC_015672.1 1370642 1371412 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_0656 branched-chain amino acid ABC transporter permease; PFAM: Bacterial inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; monosaccharide-transporting ATPase complement(1370642..1371412) Flexistipes sinusarabici DSM 4947 10815596 YP_004603510.1 CDS Flexsi_1290 NC_015672.1 1371414 1372358 R PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dps:DP2489 high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); PFAM: Bacterial inner-membrane translocator; SPTR: Probable high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); ABC transporter complement(1371414..1372358) Flexistipes sinusarabici DSM 4947 10815597 YP_004603511.1 CDS Flexsi_1291 NC_015672.1 1372358 1373257 R PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_0654 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; ABC transporter complement(1372358..1373257) Flexistipes sinusarabici DSM 4947 10815598 YP_004603512.1 CDS Flexsi_1292 NC_015672.1 1373283 1374407 R PFAM: Receptor family ligand binding region; COGs: COG1350 alternative tryptophan synthase beta-subunit (paralog of TrpB); HAMAP: Tryptophan synthase beta chain; InterPro IPR006316:IPR001926; KEGG: cni:Calni_2017 tryptophan synthase, beta chain; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain 1; TIGRFAM: Tryptophan synthase, beta chain-like; extracellular ligand-binding receptor complement(1373283..1374407) Flexistipes sinusarabici DSM 4947 10815599 YP_004603513.1 CDS Flexsi_1293 NC_015672.1 1375265 1376611 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: ddf:DEFDS_1431 hypothetical protein; PFAM: Protein of unknown function DUF208; SPTR: Putative uncharacterized protein; tryptophan synthase subunit beta 1375265..1376611 Flexistipes sinusarabici DSM 4947 10815600 YP_004603514.1 CDS Flexsi_1294 NC_015672.1 1376671 1377252 D PFAM: Uncharacterized BCR, COG1636; KEGG: cni:Calni_0030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1376671..1377252 Flexistipes sinusarabici DSM 4947 10815601 YP_004603515.1 CDS Flexsi_1295 NC_015672.1 1377253 1377474 D PFAM: Protein of unknown function (DUF2905); COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: ddf:DEFDS_1433 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; hypothetical protein 1377253..1377474 Flexistipes sinusarabici DSM 4947 10815602 YP_004603516.1 CDS Flexsi_1296 NC_015672.1 1377547 1377750 R PFAM: 'Cold-shock' DNA-binding domain; InterPro IPR003448; KEGG: cni:Calni_1063 molybdopterin biosynthesis protein MoaE; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin biosynthesis protein MoaE; cold-shock DNA-binding domain-containing protein complement(1377547..1377750) Flexistipes sinusarabici DSM 4947 10815603 YP_004603517.1 CDS Flexsi_1297 NC_015672.1 1377904 1378302 D PFAM: MoaE protein; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: cni:Calni_0550 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; SPTR: Transglutaminase domain-containing protein; molybdopterin biosynthesis MoaE protein 1377904..1378302 Flexistipes sinusarabici DSM 4947 10815604 YP_004603518.1 CDS Flexsi_1298 NC_015672.1 1378321 1380249 R PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); manually curated; transglutaminase domain-containing protein complement(1378321..1380249) Flexistipes sinusarabici DSM 4947 10815605 YP_004603519.1 CDS Flexsi_1300 NC_015672.1 1381139 1382071 R PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: ddf:DEFDS_1575 hypothetical protein; SPTR: Putative solute symporter protein; TIGRFAM: Probable solute:sodium symporter, small subunit; ATPase complement(1381139..1382071) Flexistipes sinusarabici DSM 4947 10815607 YP_004603520.1 CDS Flexsi_1301 NC_015672.1 1382509 1382769 D TIGRFAM: putative solute:sodium symporter small subunit; COGs: COG4147 symporter; InterPro IPR019899:IPR001734; KEGG: ddf:DEFDS_1574 solute:sodium symporter; PFAM: Sodium/solute symporter; SPTR: Solute:sodium symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; putative solute symporter protein 1382509..1382769 Flexistipes sinusarabici DSM 4947 10815608 YP_004603521.1 CDS Flexsi_1302 NC_015672.1 1382782 1384596 D PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; KEGG: ddf:DEFDS_1573 hypothetical protein; SPTR: Putative uncharacterized protein; putative sodium symporter protein 1382782..1384596 Flexistipes sinusarabici DSM 4947 10815609 YP_004603522.1 CDS Flexsi_1303 NC_015672.1 1384716 1385078 D COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: ddf:DEFDS_1572 cyclic nucleotide binding protein; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core; Cyclic nucleotide-binding; SPTR: Cyclic nucleotide binding protein; hypothetical protein 1384716..1385078 Flexistipes sinusarabici DSM 4947 10815610 YP_004603523.1 CDS Flexsi_1304 NC_015672.1 1385093 1387012 D PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR015413:IPR013155; KEGG: ddf:DEFDS_0790 leucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Valine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 1385093..1387012 Flexistipes sinusarabici DSM 4947 10815611 YP_004603524.1 CDS Flexsi_1305 NC_015672.1 1387525 1390083 D PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; KEGG: cni:Calni_0470 hypothetical protein; SPTR: Putative uncharacterized protein; leucyl-tRNA synthetase 1387525..1390083 Flexistipes sinusarabici DSM 4947 10815612 YP_004603525.1 CDS Flexsi_1306 NC_015672.1 1390083 1390568 D COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: cni:Calni_0471 DNA polymerase III delta; PFAM: DNA polymerase III, delta; SPTR: DNA polymerase III delta; hypothetical protein 1390083..1390568 Flexistipes sinusarabici DSM 4947 10815613 YP_004603526.1 CDS Flexsi_1307 NC_015672.1 1390552 1391469 D PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1489 DNA-binding protein stimulates sugar fermentation; HAMAP: Sugar fermentation stimulation protein; InterPro IPR005224; KEGG: cni:Calni_0493 sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; SPTR: Sugar fermentation stimulation protein; TIGRFAM: Sugar fermentation stimulation protein; DNA polymerase III delta 1390552..1391469 Flexistipes sinusarabici DSM 4947 10815614 YP_004603527.1 CDS Flexsi_1308 NC_015672.1 1391423 1392103 R PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: ddf:DEFDS_1602 hypothetical protein; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Putative uncharacterized protein; sugar fermentation stimulation protein A complement(1391423..1392103) Flexistipes sinusarabici DSM 4947 10815615 YP_004603528.1 CDS Flexsi_1309 NC_015672.1 1392214 1392903 D PFAM: Transglycosylase SLT domain; InterPro IPR000182; KEGG: dae:Dtox_2879 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; lytic transglycosylase catalytic subunit 1392214..1392903 Flexistipes sinusarabici DSM 4947 10815616 YP_004603529.1 CDS Flexsi_1310 NC_015672.1 1393073 1393558 D PFAM: Acetyltransferase (GNAT) family; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: tit:Thit_0992 ABC transporter, ATPase, predicted; PFAM: ABC transporter, ATPase, predicted; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 1393073..1393558 Flexistipes sinusarabici DSM 4947 10815617 YP_004603530.1 CDS Flexsi_1311 NC_015672.1 1393524 1395254 R PFAM: Predicted ATPase of the ABC class; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR001320; KEGG: drt:Dret_1093 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Extracellular solute-binding protein family 3; ABC transporter ATPase complement(1393524..1395254) Flexistipes sinusarabici DSM 4947 10815618 YP_004603531.1 CDS Flexsi_1312 NC_015672.1 1395417 1396163 D PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: dvm:DvMF_1919 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ABC transporter periplasmic subunit 1395417..1396163 Flexistipes sinusarabici DSM 4947 10815619 YP_004603532.1 CDS Flexsi_1313 NC_015672.1 1396221 1396886 D PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dsa:Desal_2287 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; polar amino acid ABC transporter inner membrane subunit 1396221..1396886 Flexistipes sinusarabici DSM 4947 10815620 YP_004603533.1 CDS Flexsi_1314 NC_015672.1 1396883 1397608 D PFAM: ABC transporter; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR002192; KEGG: dap:Dacet_2177 pyruvate phosphate dikinase PEP/pyruvate-binding protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; SPTR: Pyruvate phosphate dikinase PEP/pyruvate-binding protein; sulfate-transporting ATPase 1396883..1397608 Flexistipes sinusarabici DSM 4947 10815621 YP_004603534.1 CDS Flexsi_1315 NC_015672.1 1397888 1400488 R PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: dap:Dacet_2178 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Glu/Leu/Phe/Val dehydrogenase; pyruvate phosphate dikinase PEP/pyruvate-binding protein complement(1397888..1400488) Flexistipes sinusarabici DSM 4947 10815622 YP_004603535.1 CDS Flexsi_1316 NC_015672.1 1400595 1401944 R PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; glutamate dehydrogenase (NADP(+)) complement(1400595..1401944) Flexistipes sinusarabici DSM 4947 10815623 YP_004603536.1 CDS Flexsi_1317 NC_015672.1 1402021 1403286 R COGs: COG3332 conserved hypothetical protein; InterPro IPR008551; KEGG: swo:Swol_2245 hypothetical protein; PFAM: Protein of unknown function DUF833; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(1402021..1403286) Flexistipes sinusarabici DSM 4947 10815624 YP_004603537.1 CDS Flexsi_1318 NC_015672.1 1403576 1404361 R PFAM: Protein of unknown function (DUF833); COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: sfu:Sfum_1309 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: Lactaldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase (NAD(+)); hypothetical protein complement(1403576..1404361) Flexistipes sinusarabici DSM 4947 10815625 YP_004603538.1 CDS Flexsi_1319 NC_015672.1 1404365 1405792 R PFAM: Aldehyde dehydrogenase family; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR004017; KEGG: cni:Calni_1838 fad linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; lactaldehyde dehydrogenase complement(1404365..1405792) Flexistipes sinusarabici DSM 4947 10815626 YP_004603539.1 CDS Flexsi_1320 NC_015672.1 1406207 1409032 D PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain; KEGG: ddf:DEFDS_1393 hypothetical protein; SPTR: Putative uncharacterized protein; D-lactate dehydrogenase 1406207..1409032 Flexistipes sinusarabici DSM 4947 10815627 YP_004603540.1 CDS Flexsi_1321 NC_015672.1 1409020 1410219 D COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR005839:IPR006463:IPR013848:IPR007197:IPR 002792:IPR006638; KEGG: ddf:DEFDS_1391 tRNA-i(6)A37 thiotransferase enzyme; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-i(6)A37 thiotransferase enzyme; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; hypothetical protein 1409020..1410219 Flexistipes sinusarabici DSM 4947 10815628 YP_004603541.1 CDS Flexsi_1322 NC_015672.1 1410229 1411560 D PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: ddf:DEFDS_1390 hypothetical protein; PFAM: Protein of unknown function DUF151; SPTR: Putative uncharacterized protein; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 1410229..1411560 Flexistipes sinusarabici DSM 4947 10815629 YP_004603542.1 CDS Flexsi_1323 NC_015672.1 1411577 1412056 D PFAM: Uncharacterised ACR, COG1259; COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: ddf:DEFDS_1389 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Putative uncharacterized protein; hypothetical protein 1411577..1412056 Flexistipes sinusarabici DSM 4947 10815630 YP_004603543.1 CDS Flexsi_1324 NC_015672.1 1412060 1413238 D PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; COGs: COG4717 conserved hypothetical protein; KEGG: mbu:Mbur_1259 hypothetical protein; SPTR: ATPase domain-like membrane protein; metallophosphoesterase 1412060..1413238 Flexistipes sinusarabici DSM 4947 10815631 YP_004603544.1 CDS Flexsi_1325 NC_015672.1 1413235 1416531 D COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: cni:Calni_1842 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; hypothetical protein 1413235..1416531 Flexistipes sinusarabici DSM 4947 10815632 YP_004603545.1 CDS Flexsi_1326 NC_015672.1 1416528 1417274 D PFAM: Carbon-nitrogen hydrolase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: aca:ACP_1229 pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulphide oxidoreductase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1416528..1417274 Flexistipes sinusarabici DSM 4947 10815633 YP_004603546.1 CDS Flexsi_1327 NC_015672.1 1417380 1418732 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: gme:Gmet_0123 flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; PRIAM: 2,4-dienoyl-CoA reductase (NADPH); SPTR: Flavin oxidoreductase/NADH oxidase; dihydrolipoyl dehydrogenase 1417380..1418732 Flexistipes sinusarabici DSM 4947 10815634 YP_004603547.1 CDS Flexsi_1328 NC_015672.1 1418775 1419866 D PFAM: NADH:flavin oxidoreductase / NADH oxidase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: ddf:DEFDS_0678 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase hydrolase; 2,4-dienoyl-CoA reductase 1418775..1419866 Flexistipes sinusarabici DSM 4947 10815635 YP_004603548.1 CDS Flexsi_1329 NC_015672.1 1419910 1420494 R PFAM: Isochorismatase family; COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR004572:IPR002937; KEGG: ddf:DEFDS_1356 protoporphyrinogen oxidase; PFAM: Amine oxidase; PRIAM: Protoporphyrinogen oxidase; SPTR: Protoporphyrinogen oxidase; TIGRFAM: Protoporphyrinogen oxidase; isochorismatase hydrolase complement(1419910..1420494) Flexistipes sinusarabici DSM 4947 10815636 YP_004603549.1 CDS Flexsi_1330 NC_015672.1 1420512 1421891 R PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase; InterPro IPR003790; KEGG: ddf:DEFDS_1357 hypothetical protein; PFAM: Protein of unknown function DUF187; SPTR: Putative uncharacterized protein; protoporphyrinogen oxidase complement(1420512..1421891) Flexistipes sinusarabici DSM 4947 10815637 YP_004603550.1 CDS Flexsi_1331 NC_015672.1 1421905 1423041 R PFAM: Uncharacterised BCR, COG1649; InterPro IPR007730; KEGG: ddf:DEFDS_1358 hypothetical protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Putative uncharacterized protein; hypothetical protein complement(1421905..1423041) Flexistipes sinusarabici DSM 4947 10815638 YP_004603551.1 CDS Flexsi_1332 NC_015672.1 1423041 1423748 R PFAM: Sporulation related domain; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR001278:IPR005148:IPR015945:IPR008909; KEGG: cni:Calni_1453 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; sporulation domain-containing protein complement(1423041..1423748) Flexistipes sinusarabici DSM 4947 10815639 YP_004603552.1 CDS Flexsi_1333 NC_015672.1 1423751 1425391 R PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: hel:HELO_3429 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; arginyl-tRNA synthetase complement(1423751..1425391) Flexistipes sinusarabici DSM 4947 10815640 YP_004603553.1 CDS Flexsi_1334 NC_015672.1 1425583 1426215 R PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; lysine exporter protein LysE/YggA complement(1425583..1426215) Flexistipes sinusarabici DSM 4947 10815641 YP_004603554.1 CDS Flexsi_1335 NC_015672.1 1426871 1428238 D PFAM: Transposase domain (DUF772); transposase IS4 family protein 1426871..1428238 Flexistipes sinusarabici DSM 4947 10815642 YP_004603555.1 CDS Flexsi_1336 NC_015672.1 1430857 1430970 R KEGG: cni:Calni_1608 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1430857..1430970) Flexistipes sinusarabici DSM 4947 10815643 YP_004603556.1 CDS Flexsi_1337 NC_015672.1 1430994 1431377 R InterPro IPR010173:IPR005537; KEGG: cni:Calni_1609 crispr-associated RAMP protein, csm5 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csm5 family; TIGRFAM: CRISPR-associated protein, TM1807; hypothetical protein complement(1430994..1431377) Flexistipes sinusarabici DSM 4947 10815644 YP_004603557.1 CDS Flexsi_1338 NC_015672.1 1431374 1432507 R PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm5; InterPro IPR005537; KEGG: cni:Calni_1610 crispr-associated protein, csm4 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated protein, Csm4 family; Csm5 family CRISPR-associated RAMP protein complement(1431374..1432507) Flexistipes sinusarabici DSM 4947 10815645 YP_004603558.1 CDS Flexsi_1339 NC_015672.1 1432509 1433435 R TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm4; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013412:IPR005537; KEGG: cni:Calni_1611 crispr-associated protein, csm3 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated protein, Csm3 family; TIGRFAM: CRISPR-associated RAMP Csm3; hypothetical protein complement(1432509..1433435) Flexistipes sinusarabici DSM 4947 10815646 YP_004603559.1 CDS Flexsi_1340 NC_015672.1 1433445 1434143 R PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm3; InterPro IPR010149; KEGG: cni:Calni_1612 crispr-associated protein, csm2 family; PFAM: CRISPR-associated protein, TM1810 C-terminal; SPTR: CRISPR-associated protein, Csm2 family; TIGRFAM: CRISPR-associated protein, TM1810 C-terminal; Csm3 family CRISPR-associated RAMP protein complement(1433445..1434143) Flexistipes sinusarabici DSM 4947 10815647 YP_004603560.1 CDS Flexsi_1341 NC_015672.1 1434154 1434576 R PFAM: Protein of unknown function (DUF310); TIGRFAM: CRISPR type III-A/MTUBE-associated protein Csm2; This gene is disrupted by insertion of repetitive element; manually curated; CRISPR-associated protein complement(1434154..1434576) Flexistipes sinusarabici DSM 4947 10815648 YP_004603561.1 CDS Flexsi_1343 NC_015672.1 1435401 1436768 R PFAM: Transposase domain (DUF772); InterPro IPR015093; KEGG: cni:Calni_1614 hypothetical protein; PFAM: Protein of unknown function DUF1887; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(1435401..1436768) Flexistipes sinusarabici DSM 4947 10815650 YP_004603562.1 CDS Flexsi_1344 NC_015672.1 1438517 1439689 R PFAM: Domain of unknown function (DUF1887); KEGG: cni:Calni_1615 crispr-associated protein cas6; SPTR: CRISPR-associated protein Cas6; hypothetical protein complement(1438517..1439689) Flexistipes sinusarabici DSM 4947 10815651 YP_004603563.1 CDS Flexsi_1345 NC_015672.1 1439682 1440593 R PFAM: Uncharacterized conserved protein (DUF2276); InterPro IPR002059; KEGG: cni:Calni_1600 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SPTR: Putative uncharacterized protein; crispr-associated protein cas6 complement(1439682..1440593) Flexistipes sinusarabici DSM 4947 10815652 YP_004603564.1 CDS Flexsi_1346 NC_015672.1 1440711 1442126 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cni:Calni_1597 crispr-associated protein cas2; SPTR: CRISPR-associated protein Cas2; TIGRFAM: Protein of unknown function DUF196; cold-shock protein 1440711..1442126 Flexistipes sinusarabici DSM 4947 10815653 YP_004603565.1 CDS Flexsi_1347 NC_015672.1 1442127 1442408 R PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: cni:Calni_1599 crispr-associated protein cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas2 complement(1442127..1442408) Flexistipes sinusarabici DSM 4947 10815654 YP_004603566.1 CDS Flexsi_1348 NC_015672.1 1442405 1443415 R PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; COGs: COG4951 conserved hypothetical protein; KEGG: cni:Calni_1598 DNA primase small subunit; SPTR: DNA primase small subunit; CRISPR-associated protein Cas1 complement(1442405..1443415) Flexistipes sinusarabici DSM 4947 10815655 YP_004603567.1 CDS Flexsi_1349 NC_015672.1 1443412 1445169 R KEGG: cni:Calni_1607 hypothetical protein; SPTR: Putative uncharacterized protein; DNA primase small subunit complement(1443412..1445169) Flexistipes sinusarabici DSM 4947 10815656 YP_004603568.1 CDS Flexsi_1350 NC_015672.1 1445287 1445841 D KEGG: cni:Calni_1606 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1445287..1445841 Flexistipes sinusarabici DSM 4947 10815657 YP_004603569.1 CDS Flexsi_1351 NC_015672.1 1445831 1446496 D KEGG: cni:Calni_1605 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1445831..1446496 Flexistipes sinusarabici DSM 4947 10815658 YP_004603570.1 CDS Flexsi_1352 NC_015672.1 1446486 1447409 D KEGG: cni:Calni_1604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1446486..1447409 Flexistipes sinusarabici DSM 4947 10815659 YP_004603571.1 CDS Flexsi_1353 NC_015672.1 1447393 1448910 D InterPro IPR000620; KEGG: cni:Calni_1114 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 1447393..1448910 Flexistipes sinusarabici DSM 4947 10815660 YP_004603572.1 CDS Flexsi_1354 NC_015672.1 1449373 1450242 R PFAM: EamA-like transporter family; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR005116:IPR003593; KEGG: dsa:Desal_2874 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 1; PRIAM: Molybdate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative abc-transport system ATP-binding protein; hypothetical protein complement(1449373..1450242) Flexistipes sinusarabici DSM 4947 10815661 YP_004603573.1 CDS Flexsi_1355 NC_015672.1 1450305 1451318 R PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: dat:HRM2_17610 predicted ABC-type molybdate/tungstate transporter, permease component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Predicted ABC-type molybdate/tungstate transporter, permease component; molybdate-transporting ATPase complement(1450305..1451318) Flexistipes sinusarabici DSM 4947 10815662 YP_004603574.1 CDS Flexsi_1356 NC_015672.1 1451318 1452007 R PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: dat:HRM2_17620 predicted ABC-type molybdate/tungstate transporter, periplasmic substrate binding protein; SPTR: Putative tungstate ABC transporter, tungstate-binding protein; ABC transporter complement(1451318..1452007) Flexistipes sinusarabici DSM 4947 10815663 YP_004603575.1 CDS Flexsi_1357 NC_015672.1 1452103 1452915 R COGs: COG1910 Periplasmic molybdate-binding protein/domain; InterPro IPR010093; KEGG: sat:SYN_00844 molybdate-binding protein domain; SPTR: Molybdate-binding protein domain; TIGRFAM: Excisionase/Xis, DNA-binding; molybdate/tungstate ABC transporter periplasmic substrate binding protein complement(1452103..1452915) Flexistipes sinusarabici DSM 4947 10815664 YP_004603576.1 CDS Flexsi_1358 NC_015672.1 1452946 1453848 R TIGRFAM: DNA binding domain, excisionase family; KEGG: ddf:DEFDS_1360 hypothetical protein; SPTR: Putative uncharacterized protein; excisionase family DNA binding domain-containing protein complement(1452946..1453848) Flexistipes sinusarabici DSM 4947 10815665 YP_004603577.1 CDS Flexsi_1359 NC_015672.1 1453997 1455658 D KEGG: ddf:DEFDS_1361 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1453997..1455658 Flexistipes sinusarabici DSM 4947 10815666 YP_004603578.1 CDS Flexsi_1360 NC_015672.1 1455648 1456685 D COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: gur:Gura_4030 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; hypothetical protein 1455648..1456685 Flexistipes sinusarabici DSM 4947 10815667 YP_004603579.1 CDS Flexsi_1361 NC_015672.1 1456678 1457319 D PFAM: Response regulator receiver domain; KEGG: cni:Calni_0969 hypothetical protein; SPTR: Putative uncharacterized protein; response regulator receiver protein 1456678..1457319 Flexistipes sinusarabici DSM 4947 10815668 YP_004603580.1 CDS Flexsi_1362 NC_015672.1 1457306 1457512 D COGs: COG2884 ATPase involved in cell division; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0970 sigma 54 interacting domain protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Sigma 54 interacting domain protein; hypothetical protein 1457306..1457512 Flexistipes sinusarabici DSM 4947 10815669 YP_004603581.1 CDS Flexsi_1363 NC_015672.1 1457516 1458187 D PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: cni:Calni_0971 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; sigma 54 interacting domain-containing protein 1457516..1458187 Flexistipes sinusarabici DSM 4947 10815670 YP_004603582.1 CDS Flexsi_1364 NC_015672.1 1458184 1459077 D PFAM: Predicted permease; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: ddf:DEFDS_1364 hypothetical protein; PFAM: Peptidase M23; SPTR: Putative uncharacterized protein; hypothetical protein 1458184..1459077 Flexistipes sinusarabici DSM 4947 10815671 YP_004603583.1 CDS Flexsi_1365 NC_015672.1 1459070 1460212 D PFAM: Peptidase family M23; COGs: COG0793 Periplasmic protease; InterPro IPR004447:IPR001478:IPR005151; KEGG: ddf:DEFDS_1365 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; PRIAM: C-terminal processing peptidase; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl-terminal protease; TIGRFAM: Peptidase S41A, C-terminal protease; peptidase M23 1459070..1460212 Flexistipes sinusarabici DSM 4947 10815672 YP_004603584.1 CDS Flexsi_1366 NC_015672.1 1460226 1461539 D PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: cni:Calni_0974 hypothetical protein; PFAM: Protein of unknown function DUF610, YibQ; SPTR: Putative uncharacterized protein; carboxyl-terminal protease 1460226..1461539 Flexistipes sinusarabici DSM 4947 10815673 YP_004603585.1 CDS Flexsi_1367 NC_015672.1 1461514 1462707 D PFAM: Divergent polysaccharide deacetylase; COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: O-sialoglycoprotein endopeptidase; InterPro IPR017861:IPR000905; KEGG: dap:Dacet_1813 metalloendopeptidase, glycoprotease family; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; hypothetical protein 1461514..1462707 Flexistipes sinusarabici DSM 4947 10815674 YP_004603586.1 CDS Flexsi_1368 NC_015672.1 1462704 1463696 D PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269; KEGG: ddf:DEFDS_1368 tRNA-dihydrouridine synthase; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase; O-sialoglycoprotein endopeptidase 1462704..1463696 Flexistipes sinusarabici DSM 4947 10815675 YP_004603587.1 CDS Flexsi_1369 NC_015672.1 1463668 1464645 D PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: ddf:DEFDS_0624 fibronectin/fibrinogen-binding protein; PFAM: Protein of unknown function DUF814; Fibronectin-binding A, N-terminal; SPTR: Fibronectin/fibrinogen-binding protein; dihydrouridine synthase DuS 1463668..1464645 Flexistipes sinusarabici DSM 4947 10815676 YP_004603588.1 CDS Flexsi_1370 NC_015672.1 1465065 1466666 R PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482:IPR003593; KEGG: cni:Calni_1207 pilus retraction atpase PilT; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: Pilus retraction ATPase PilT; TIGRFAM: Pilus retraction protein PilT; hypothetical protein complement(1465065..1466666) Flexistipes sinusarabici DSM 4947 10815677 YP_004603589.1 CDS Flexsi_1371 NC_015672.1 1466671 1467729 R PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; InterPro IPR007831; KEGG: ddf:DEFDS_0626 hypothetical protein; PFAM: General secretory system II, protein E, N-terminal; SPTR: Putative uncharacterized protein; twitching motility protein complement(1466671..1467729) Flexistipes sinusarabici DSM 4947 10815678 YP_004603590.1 CDS Flexsi_1372 NC_015672.1 1467756 1468820 R PFAM: GSPII_E N-terminal domain; InterPro IPR001440:IPR019734; KEGG: ddf:DEFDS_0627 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; general secretory system II protein E domain-containing protein complement(1467756..1468820) Flexistipes sinusarabici DSM 4947 10815679 YP_004603591.1 CDS Flexsi_1373 NC_015672.1 1468813 1469853 R KEGG: ddf:DEFDS_1231 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1468813..1469853) Flexistipes sinusarabici DSM 4947 10815680 YP_004603592.1 CDS Flexsi_1374 NC_015672.1 1470291 1470788 D PFAM: Thioesterase superfamily; KEGG: ddf:DEFDS_0677 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 1470291..1470788 Flexistipes sinusarabici DSM 4947 10815681 YP_004603593.1 CDS Flexsi_1375 NC_015672.1 1470790 1471584 R KEGG: geo:Geob_1347 hypothetical protein; SPTR: Putative uncharacterized protein; multiheme C-type cytochrome complement(1470790..1471584) Flexistipes sinusarabici DSM 4947 10815682 YP_004603594.1 CDS Flexsi_1376 NC_015672.1 1471566 1471979 R hypothetical protein complement(1471566..1471979) Flexistipes sinusarabici DSM 4947 10815683 YP_004603595.1 CDS Flexsi_1377 NC_015672.1 1472210 1472437 D KEGG: pop:POPTR_597343 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1472210..1472437 Flexistipes sinusarabici DSM 4947 10815684 YP_004603596.1 CDS Flexsi_1378 NC_015672.1 1472496 1473002 D InterPro IPR002559; KEGG: sun:SUN_1976 transposase; PFAM: Transposase, IS4-like; SPTR: Probable transposase; hypothetical protein 1472496..1473002 Flexistipes sinusarabici DSM 4947 10815685 YP_004603597.1 CDS Flexsi_1379 NC_015672.1 1472999 1473814 D PFAM: Transposase DDE domain; KEGG: dap:Dacet_1791 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1472999..1473814 Flexistipes sinusarabici DSM 4947 10815686 YP_004603598.1 CDS Flexsi_1380 NC_015672.1 1474039 1474974 R KEGG: dap:Dacet_1790 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1474039..1474974) Flexistipes sinusarabici DSM 4947 10815687 YP_004603599.1 CDS Flexsi_1381 NC_015672.1 1474919 1476754 R Bacterial RNase P class A as predicted by Rfam (RF00010), score 305.73; hypothetical protein complement(1474919..1476754) Flexistipes sinusarabici DSM 4947 10815688 YP_004603600.1 CDS Flexsi_1382 NC_015672.1 1477946 1478320 D COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: cni:Calni_0544 hypothetical protein; PFAM: Secretion protein HlyD; SPTR: Putative uncharacterized protein; hypothetical protein 1477946..1478320 Flexistipes sinusarabici DSM 4947 10815690 YP_004603601.1 CDS Flexsi_1383 NC_015672.1 1478776 1479963 D PFAM: HlyD family secretion protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0543 abc transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; secretion protein HlyD family protein 1478776..1479963 Flexistipes sinusarabici DSM 4947 10815691 YP_004603602.1 CDS Flexsi_1384 NC_015672.1 1479960 1481765 D PFAM: ABC transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: cni:Calni_0542 abc-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; ABC transporter-like protein 1479960..1481765 Flexistipes sinusarabici DSM 4947 10815692 YP_004603603.1 CDS Flexsi_1385 NC_015672.1 1481755 1482873 D PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: cni:Calni_0541 abc-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; ABC transporter 1481755..1482873 Flexistipes sinusarabici DSM 4947 10815693 YP_004603604.1 CDS Flexsi_1386 NC_015672.1 1482870 1483976 D PFAM: ABC-2 type transporter; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: cni:Calni_1365 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Lytic transglycosylase catalytic; ABC transporter 1482870..1483976 Flexistipes sinusarabici DSM 4947 10815694 YP_004603605.1 CDS Flexsi_1387 NC_015672.1 1484085 1484678 D PFAM: Transglycosylase SLT domain; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR013520:IPR006055; KEGG: dap:Dacet_1757 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; lytic transglycosylase catalytic subunit 1484085..1484678 Flexistipes sinusarabici DSM 4947 10815695 YP_004603606.1 CDS Flexsi_1388 NC_015672.1 1484662 1485354 R PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: ddf:DEFDS_1380 hypothetical protein; PFAM: Iojap-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: Iojap-related protein; DNA polymerase III subunit epsilon complement(1484662..1485354) Flexistipes sinusarabici DSM 4947 10815696 YP_004603607.1 CDS Flexsi_1389 NC_015672.1 1485451 1485810 R PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: nicotinate-nucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820; KEGG: ddf:DEFDS_1381 nicotinate-nucleotide adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; iojap family protein complement(1485451..1485810) Flexistipes sinusarabici DSM 4947 10815697 YP_004603608.1 CDS Flexsi_1390 NC_015672.1 1485810 1486448 R PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; COGs: COG0014 Gamma-glutamyl phosphate reductase; HAMAP: Glutamate-5-semialdehyde dehydrogenase; InterPro IPR000965:IPR012134; KEGG: ddf:DEFDS_1382 glutamate-5-semialdehyde dehydrogenase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; nicotinate-nucleotide adenylyltransferase complement(1485810..1486448) Flexistipes sinusarabici DSM 4947 10815698 YP_004603609.1 CDS Flexsi_1391 NC_015672.1 1486452 1487684 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; COGs: COG0263 Glutamate 5-kinase; HAMAP: Glutamate 5-kinase; InterPro IPR005715:IPR001048:IPR002478; KEGG: ddf:DEFDS_1383 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; SMART: Pseudouridine synthase/archaeosine transglycosylase; SPTR: Glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase, ProB-related; gamma-glutamyl phosphate reductase complement(1486452..1487684) Flexistipes sinusarabici DSM 4947 10815699 YP_004603610.1 CDS Flexsi_1392 NC_015672.1 1487694 1488827 R PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase complement(1487694..1488827) Flexistipes sinusarabici DSM 4947 10815700 YP_004603611.1 CDS Flexsi_1393 NC_015672.1 1489243 1489935 R COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: cni:Calni_0781 had-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Phosphoglycolate phosphatase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; hypothetical protein complement(1489243..1489935) Flexistipes sinusarabici DSM 4947 10815702 YP_004603612.1 CDS Flexsi_1394 NC_015672.1 1490279 1490911 D PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; KEGG: tye:THEYE_A1944 lipoprotein, putative; SPTR: Putative uncharacterized protein; HAD-superfamily hydrolase 1490279..1490911 Flexistipes sinusarabici DSM 4947 10815703 YP_004603613.1 CDS Flexsi_1395 NC_015672.1 1490919 1491350 R PFAM: Protein of unknown function (DUF3617); COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; lipoprotein complement(1490919..1491350) Flexistipes sinusarabici DSM 4947 10815704 YP_004603614.1 CDS Flexsi_1396 NC_015672.1 1491490 1492539 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR000014:IPR013655:IPR013767:IPR003594:IPR 001789:IPR001610; KEGG: dak:DaAHT2_2564 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-3; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; transposase IS4 family protein 1491490..1492539 Flexistipes sinusarabici DSM 4947 10815705 YP_004603615.1 CDS Flexsi_1397 NC_015672.1 1492918 1496418 D PFAM: ABC transporter substrate binding protein; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: nis:NIS_1506 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; multi-sensor hybrid histidine kinase 1492918..1496418 Flexistipes sinusarabici DSM 4947 10815706 YP_004603616.1 CDS Flexsi_1398 NC_015672.1 1496452 1497177 R PFAM: RNA pseudouridylate synthase; pseudouridine synthase complement(1496452..1497177) Flexistipes sinusarabici DSM 4947 10815707 YP_004603617.1 CDS Flexsi_1399 NC_015672.1 1497477 1498703 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase complement(1497477..1498703) Flexistipes sinusarabici DSM 4947 10815709 YP_004603618.1 CDS Flexsi_1400 NC_015672.1 1498707 1498940 R COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203; KEGG: gsu:GSU0910 aldehyde:ferredoxin oxidoreductase, tungsten-containing; PFAM: Aldehyde ferredoxin oxidoreductase, C-terminal; Aldehyde ferredoxin oxidoreductase, N-terminal; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase, N-terminal; SPTR: Aldehyde:ferredoxin oxidoreductase, tungsten-containing; hypothetical protein complement(1498707..1498940) Flexistipes sinusarabici DSM 4947 10815710 YP_004603619.1 CDS Flexsi_1401 NC_015672.1 1498998 1500800 R PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_0246 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin; aldehyde ferredoxin oxidoreductase complement(1498998..1500800) Flexistipes sinusarabici DSM 4947 10815711 YP_004603620.1 CDS Flexsi_1402 NC_015672.1 1500802 1501281 R PFAM: 4Fe-4S binding domain; InterPro IPR003749; KEGG: ddf:DEFDS_1122 molybdenum cofactor biosynthesis protein D; PFAM: ThiamineS; SPTR: Molybdenum cofactor biosynthesis protein D; 4Fe-4S ferredoxin complement(1500802..1501281) Flexistipes sinusarabici DSM 4947 10815712 YP_004603621.1 CDS Flexsi_1403 NC_015672.1 1501367 1501606 R PFAM: ThiS family; KEGG: dap:Dacet_0430 integral membrane sensor signal transduction histidine kinase; SPTR: Integral membrane sensor signal transduction histidine kinase; sulfur transfer protein ThiS complement(1501367..1501606) Flexistipes sinusarabici DSM 4947 10815713 YP_004603622.1 CDS Flexsi_1404 NC_015672.1 1501996 1503060 D InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; integral membrane sensor signal transduction histidine kinase 1501996..1503060 Flexistipes sinusarabici DSM 4947 10815714 YP_004603623.1 CDS Flexsi_1405 NC_015672.1 1503205 1504458 D PFAM: Transposase DDE domain; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: cni:Calni_0441 cobalamin (vitamin b12) biosynthesis CbiM protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein; transposase IS4 family protein 1503205..1504458 Flexistipes sinusarabici DSM 4947 10815715 YP_004603624.1 CDS Flexsi_1406 NC_015672.1 1504734 1505693 D PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: cni:Calni_0440 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; cobalamin (vitamin B12) biosynthesis protein CbiM 1504734..1505693 Flexistipes sinusarabici DSM 4947 10815716 YP_004603625.1 CDS Flexsi_1407 NC_015672.1 1505690 1506451 D PFAM: Cobalt transport protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0439 abc transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 1505690..1506451 Flexistipes sinusarabici DSM 4947 10815717 YP_004603626.1 CDS Flexsi_1408 NC_015672.1 1506453 1507172 D PFAM: ABC transporter; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006388:IPR006328:IPR005834; KEGG: slt:Slit_1336 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: (S)-2-haloacid dehalogenase; SPTR: Haloacid dehalogenase, type II; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; phosphonate-transporting ATPase 1506453..1507172 Flexistipes sinusarabici DSM 4947 10815718 YP_004603627.1 CDS Flexsi_1409 NC_015672.1 1507166 1507843 R PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II; KEGG: cyp:PCC8801_3050 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; haloacid dehalogenase complement(1507166..1507843) Flexistipes sinusarabici DSM 4947 10815719 YP_004603628.1 CDS Flexsi_1410 NC_015672.1 1508285 1508599 R COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein complement(1508285..1508599) Flexistipes sinusarabici DSM 4947 10815720 YP_004603629.1 CDS Flexsi_1411 NC_015672.1 1509209 1511044 R PFAM: Transposase DDE domain; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: ddf:DEFDS_1789 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; transposase IS4 family protein complement(1509209..1511044) Flexistipes sinusarabici DSM 4947 10815721 YP_004603630.1 CDS Flexsi_1412 NC_015672.1 1511635 1512450 D PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; MazG family protein 1511635..1512450 Flexistipes sinusarabici DSM 4947 10815722 YP_004603631.1 CDS Flexsi_1413 NC_015672.1 1512667 1513986 D PFAM: Transposase DDE domain; KEGG: ddf:DEFDS_1790 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1512667..1513986 Flexistipes sinusarabici DSM 4947 10815723 YP_004603632.1 CDS Flexsi_1414 NC_015672.1 1514245 1514487 D COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: cni:Calni_0563 endoribonuclease L-psp; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; hypothetical protein 1514245..1514487 Flexistipes sinusarabici DSM 4947 10815724 YP_004603633.1 CDS Flexsi_1415 NC_015672.1 1514709 1515089 R PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; KEGG: ddf:DEFDS_0649 hypothetical protein; SPTR: Putative uncharacterized protein; endoribonuclease L-PSP complement(1514709..1515089) Flexistipes sinusarabici DSM 4947 10815725 YP_004603634.1 CDS Flexsi_1416 NC_015672.1 1515100 1515783 R COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: ddf:DEFDS_0648 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Octaprenyl-diphosphate synthase; hypothetical protein complement(1515100..1515783) Flexistipes sinusarabici DSM 4947 10815726 YP_004603635.1 CDS Flexsi_1417 NC_015672.1 1516120 1517094 D PFAM: Polyprenyl synthetase; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197; KEGG: ddf:DEFDS_0647 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM; SPTR: Pyruvate-formate lyase-activating enzyme; trans-hexaprenyltranstransferase 1516120..1517094 Flexistipes sinusarabici DSM 4947 10815727 YP_004603636.1 CDS Flexsi_1418 NC_015672.1 1517094 1518095 D PFAM: Radical SAM superfamily; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: ddf:DEFDS_0646 thiamine biosynthesis lipoprotein ApbE; PFAM: ApbE-like lipoprotein; SPTR: Thiamine biosynthesis lipoprotein ApbE; radical SAM protein 1517094..1518095 Flexistipes sinusarabici DSM 4947 10815728 YP_004603637.1 CDS Flexsi_1419 NC_015672.1 1518095 1519063 D PFAM: ApbE family; InterPro IPR010739; KEGG: ddf:DEFDS_0645 hypothetical protein; PFAM: Protein of unknown function DUF1312; SPTR: Putative uncharacterized protein; ApbE family lipoprotein 1518095..1519063 Flexistipes sinusarabici DSM 4947 10815729 YP_004603638.1 CDS Flexsi_1420 NC_015672.1 1519047 1519412 D PFAM: Protein of unknown function (DUF1312); COGs: COG4769 membrane protein; InterPro IPR010898; KEGG: ddf:DEFDS_0644 hypothetical protein; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: Putative uncharacterized protein; hypothetical protein 1519047..1519412 Flexistipes sinusarabici DSM 4947 10815730 YP_004603639.1 CDS Flexsi_1421 NC_015672.1 1519396 1519899 D PFAM: Heptaprenyl diphosphate synthase component I; COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: cni:Calni_0556 maf protein; PFAM: Maf-like protein; SPTR: Maf-like protein Calni_0556; TIGRFAM: Maf-like protein; heptaprenyl diphosphate synthase component I 1519396..1519899 Flexistipes sinusarabici DSM 4947 10815731 YP_004603640.1 CDS Flexsi_1422 NC_015672.1 1519915 1520517 D PFAM: Maf-like protein; TIGRFAM: MAF protein; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: ddf:DEFDS_0642 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Long-chain fatty-acid-CoA ligase; Septum formation protein Maf 1519915..1520517 Flexistipes sinusarabici DSM 4947 10815732 YP_004603641.1 CDS Flexsi_1423 NC_015672.1 1520504 1522060 D PFAM: AMP-binding enzyme; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR003593; KEGG: ddf:DEFDS_0839 phosphate-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Phosphate-transporting ATPase; long-chain-fatty-acid--CoA ligase 1520504..1522060 Flexistipes sinusarabici DSM 4947 10815733 YP_004603642.1 CDS Flexsi_1424 NC_015672.1 1522273 1523202 D PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR002308:IPR015803:IPR015273; KEGG: ddf:DEFDS_0838 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; nickel-transporting ATPase 1522273..1523202 Flexistipes sinusarabici DSM 4947 10815734 YP_004603643.1 CDS Flexsi_1425 NC_015672.1 1523217 1524650 D PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cni:Calni_0408 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 4-epimerase; SPTR: NAD-dependent epimerase/dehydratase; cysteinyl-tRNA synthetase 1523217..1524650 Flexistipes sinusarabici DSM 4947 10815735 YP_004603644.1 CDS Flexsi_1426 NC_015672.1 1524845 1525813 D PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: cni:Calni_0212 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; UDP-glucuronate 4-epimerase 1524845..1525813 Flexistipes sinusarabici DSM 4947 10815736 YP_004603645.1 CDS Flexsi_1427 NC_015672.1 1526018 1526821 D PFAM: Carbon-nitrogen hydrolase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: cni:Calni_0213 acetyl-CoA hydrolase; PFAM: Acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Acetyl-CoA hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1526018..1526821 Flexistipes sinusarabici DSM 4947 10815737 YP_004603646.1 CDS Flexsi_1428 NC_015672.1 1526832 1528388 D PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases; InterPro IPR000845; KEGG: dap:Dacet_1934 purine or other phosphorylase family 1; PFAM: Nucleoside phosphorylase; SPTR: Purine or other phosphorylase family 1; acetyl-CoA hydrolase 1526832..1528388 Flexistipes sinusarabici DSM 4947 10815738 YP_004603647.1 CDS Flexsi_1429 NC_015672.1 1528444 1529088 R PFAM: Phosphorylase superfamily; TIGRFAM: futalosine nucleosidase; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620:IPR003171; KEGG: ddf:DEFDS_1143 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; purine or other phosphorylase family 1 complement(1528444..1529088) Flexistipes sinusarabici DSM 4947 10815739 YP_004603648.1 CDS Flexsi_1430 NC_015672.1 1529098 1529961 R PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dap:Dacet_1180 ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; 5,10-methylenetetrahydrofolate reductase complement(1529098..1529961) Flexistipes sinusarabici DSM 4947 10815740 YP_004603649.1 CDS Flexsi_1431 NC_015672.1 1530343 1530738 R PFAM: Ferric uptake regulator family; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: nhl:Nhal_1142 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; PRIAM: Catalase; SPTR: Catalase; Fur family ferric uptake regulator complement(1530343..1530738) Flexistipes sinusarabici DSM 4947 10815741 YP_004603650.1 CDS Flexsi_1432 NC_015672.1 1531008 1532462 D PFAM: Catalase; Catalase-related immune-responsive; COGs: COG0506 Proline dehydrogenase; InterPro IPR002872; KEGG: ddf:DEFDS_1068 proline dehydrogenase; PFAM: Proline dehydrogenase; PRIAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; catalase 1531008..1532462 Flexistipes sinusarabici DSM 4947 10815742 YP_004603651.1 CDS Flexsi_1433 NC_015672.1 1532608 1533519 R PFAM: Proline dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: cni:Calni_0885 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; proline dehydrogenase complement(1532608..1533519) Flexistipes sinusarabici DSM 4947 10815743 YP_004603652.1 CDS Flexsi_1434 NC_015672.1 1533564 1535207 R PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; InterPro IPR006680; KEGG: ddf:DEFDS_1223 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1; PRIAM: S-adenosylhomocysteine deaminase; SPTR: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; delta-1-pyrroline-5-carboxylate dehydrogenase complement(1533564..1535207) Flexistipes sinusarabici DSM 4947 10815744 YP_004603653.1 CDS Flexsi_1435 NC_015672.1 1535895 1537181 D PFAM: Amidohydrolase family; InterPro IPR008815; KEGG: sun:SUN_0718 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; 5-methylthioadenosine/S-adenosylhomocysteine deaminase 1535895..1537181 Flexistipes sinusarabici DSM 4947 10815745 YP_004603654.1 CDS Flexsi_1436 NC_015672.1 1537236 1537583 D PFAM: S23 ribosomal protein; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR000362:IPR019468; KEGG: ddf:DEFDS_1224 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase, C-terminal; Fumarate lyase; PRIAM: Adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; S23 ribosomal protein 1537236..1537583 Flexistipes sinusarabici DSM 4947 10815746 YP_004603655.1 CDS Flexsi_1437 NC_015672.1 1537669 1539105 D PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: ddf:DEFDS_0484 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; adenylosuccinate lyase 1537669..1539105 Flexistipes sinusarabici DSM 4947 10815747 YP_004603656.1 CDS Flexsi_1438 NC_015672.1 1539335 1539826 D PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: ddf:DEFDS_0485 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; RpiB/LacA/LacB family sugar-phosphate isomerase 1539335..1539826 Flexistipes sinusarabici DSM 4947 10815748 YP_004603657.1 CDS Flexsi_1439 NC_015672.1 1539826 1541082 D PFAM: Serine hydroxymethyltransferase; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: ddf:DEFDS_0486 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: CMP/dCMP deaminase, zinc-binding protein; glycine hydroxymethyltransferase 1539826..1541082 Flexistipes sinusarabici DSM 4947 10815749 YP_004603658.1 CDS Flexsi_1440 NC_015672.1 1541079 1541528 D PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; HAMAP: Electron transport complex protein rnfC; InterPro IPR010208:IPR011538:IPR019554:IPR001450; KEGG: cni:Calni_0590 electron transport complex, rnfabcdge type, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: Electron transport complex, RnfC; CMP/dCMP deaminase zinc-binding protein 1541079..1541528 Flexistipes sinusarabici DSM 4947 10815750 YP_004603659.1 CDS Flexsi_1441 NC_015672.1 1541543 1542841 D PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR011303:IPR004338; KEGG: ddf:DEFDS_0488 electron transport complex protein RnfD; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Electron transport complex protein RnfD; TIGRFAM: Electron transport complex, RnfD; electron transport complex protein RnfC 1541543..1542841 Flexistipes sinusarabici DSM 4947 10815751 YP_004603660.1 CDS Flexsi_1442 NC_015672.1 1542838 1543830 D PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG; InterPro IPR010209:IPR007329; KEGG: ddf:DEFDS_0489 electron transport complex protein RnfG; PFAM: FMN-binding; SPTR: Electron transport complex protein RnfG; TIGRFAM: Electron transport complex, RnfG; RnfABCDGE type electron transport complex subunit D 1542838..1543830 Flexistipes sinusarabici DSM 4947 10815752 YP_004603661.1 CDS Flexsi_1443 NC_015672.1 1543827 1544390 D PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR010968:IPR003667; KEGG: ddf:DEFDS_0490 electron transport complex protein RnfE; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex protein RnfE; TIGRFAM: Electron transport complex, RnfE; RnfABCDGE type electron transport complex subunit G 1543827..1544390 Flexistipes sinusarabici DSM 4947 10815753 YP_004603662.1 CDS Flexsi_1444 NC_015672.1 1544380 1545012 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; InterPro IPR011293:IPR003667; KEGG: ddf:DEFDS_0491 electron transport complex protein RnfA; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex protein RnfA; TIGRFAM: Electron transport complex, RnfA; RnfABCDGE type electron transport complex subunit E 1544380..1545012 Flexistipes sinusarabici DSM 4947 10815754 YP_004603663.1 CDS Flexsi_1445 NC_015672.1 1545036 1545614 D PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; COGs: COG2878 NADH:ubiquinone oxidoreductase subunit RnfB; InterPro IPR010207:IPR007202:IPR001450; KEGG: ddf:DEFDS_0492 electron transport complex protein RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Electron transport complex protein RnfB; TIGRFAM: Electron transport complex, RnfB; RnfABCDGE type electron transport complex subunit A 1545036..1545614 Flexistipes sinusarabici DSM 4947 10815755 YP_004603664.1 CDS Flexsi_1446 NC_015672.1 1545649 1546455 D PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: ddf:DEFDS_0493 acetoin utilization protein AcuC; PFAM: Histone deacetylase superfamily; SPTR: Acetoin utilization protein AcuC; RnfABCDGE type electron transport complex subunit B 1545649..1546455 Flexistipes sinusarabici DSM 4947 10815756 YP_004603665.1 CDS Flexsi_1447 NC_015672.1 1546459 1547466 D PFAM: Histone deacetylase domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; histone deacetylase superfamily protein 1546459..1547466 Flexistipes sinusarabici DSM 4947 10815757 YP_004603666.1 CDS Flexsi_1448 NC_015672.1 1547542 1548555 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: ddf:DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+); PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP+); transposase IS116/IS110/IS902 family protein complement(1547542..1548555) Flexistipes sinusarabici DSM 4947 10815758 YP_004603667.1 CDS Flexsi_1449 NC_015672.1 1549588 1551888 D PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902:IPR010054:IPR013545; KEGG: ddf:DEFDS_1311 general secretion pathway protein G; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; SPTR: General secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; malate dehydrogenase 1549588..1551888 Flexistipes sinusarabici DSM 4947 10815759 YP_004603668.1 CDS Flexsi_1450 NC_015672.1 1552299 1552745 D PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: dap:Dacet_0486 hypothetical protein; SPTR: Putative uncharacterized protein; general secretion pathway protein G 1552299..1552745 Flexistipes sinusarabici DSM 4947 10815760 YP_004603669.1 CDS Flexsi_1451 NC_015672.1 1552714 1553190 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: ddf:DEFDS_1313 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1552714..1553190 Flexistipes sinusarabici DSM 4947 10815761 YP_004603670.1 CDS Flexsi_1452 NC_015672.1 1553180 1553518 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: dap:Dacet_0484 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1553180..1553518 Flexistipes sinusarabici DSM 4947 10815762 YP_004603671.1 CDS Flexsi_1453 NC_015672.1 1553505 1554023 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; KEGG: dap:Dacet_0483 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1553505..1554023 Flexistipes sinusarabici DSM 4947 10815763 YP_004603672.1 CDS Flexsi_1454 NC_015672.1 1554013 1554954 D PFAM: General secretion pathway protein K; KEGG: ddf:DEFDS_1316 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1554013..1554954 Flexistipes sinusarabici DSM 4947 10815764 YP_004603673.1 CDS Flexsi_1455 NC_015672.1 1555011 1556024 D KEGG: ddf:DEFDS_1317 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1555011..1556024 Flexistipes sinusarabici DSM 4947 10815765 YP_004603674.1 CDS Flexsi_1456 NC_015672.1 1556021 1556497 D KEGG: ddf:DEFDS_1318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1556021..1556497 Flexistipes sinusarabici DSM 4947 10815766 YP_004603675.1 CDS Flexsi_1457 NC_015672.1 1556497 1557228 D KEGG: ddf:DEFDS_1319 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1556497..1557228 Flexistipes sinusarabici DSM 4947 10815767 YP_004603676.1 CDS Flexsi_1458 NC_015672.1 1557369 1558700 R COGs: COG1971 membrane protein; HAMAP: UPF0059 membrane protein yebN; InterPro IPR003810; KEGG: cni:Calni_1186 hypothetical protein; PFAM: Protein of unknown function DUF204; SPTR: UPF0059 membrane protein Calni_1186; hypothetical protein complement(1557369..1558700) Flexistipes sinusarabici DSM 4947 10815768 YP_004603677.1 CDS Flexsi_1459 NC_015672.1 1559110 1559655 D PFAM: Domain of unknown function DUF; COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: ddf:DEFDS_1279 hypothetical protein; PFAM: Protein of unknown function DUF178; SPTR: Putative uncharacterized protein; hypothetical protein 1559110..1559655 Flexistipes sinusarabici DSM 4947 10815769 YP_004603678.1 CDS Flexsi_1460 NC_015672.1 1559658 1560434 D PFAM: Putative periplasminc binding protein (DUF178); COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: ddf:DEFDS_1278 mechanosensitive ion channel, MscS family; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel, MscS family; hypothetical protein 1559658..1560434 Flexistipes sinusarabici DSM 4947 10815770 YP_004603679.1 CDS Flexsi_1461 NC_015672.1 1560418 1561542 R PFAM: Mechanosensitive ion channel; KEGG: ddf:DEFDS_1277 hypothetical protein; SPTR: Putative uncharacterized protein; mechanosensitive ion channel MscS complement(1560418..1561542) Flexistipes sinusarabici DSM 4947 10815771 YP_004603680.1 CDS Flexsi_1462 NC_015672.1 1561535 1561960 R PFAM: Stringent starvation protein B; InterPro IPR018392:IPR002482; KEGG: ddf:DEFDS_0822 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; hypothetical protein complement(1561535..1561960) Flexistipes sinusarabici DSM 4947 10815772 YP_004603681.1 CDS Flexsi_1463 NC_015672.1 1562047 1562883 R PFAM: LysM domain; COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004524:IPR004365:IPR004364:IPR004115; KEGG: cni:Calni_0871 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; peptidoglycan-binding lysin domain-containing protein complement(1562047..1562883) Flexistipes sinusarabici DSM 4947 10815773 YP_004603682.1 CDS Flexsi_1464 NC_015672.1 1562956 1564746 R PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: ddf:DEFDS_1553 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; aspartyl-tRNA synthetase complement(1562956..1564746) Flexistipes sinusarabici DSM 4947 10815774 YP_004603683.1 CDS Flexsi_1465 NC_015672.1 1564771 1566021 R PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: ddf:DEFDS_1554 hypothetical protein; PFAM: Protein of unknown function DUF296; SPTR: Putative uncharacterized protein; histidyl-tRNA synthetase complement(1564771..1566021) Flexistipes sinusarabici DSM 4947 10815775 YP_004603684.1 CDS Flexsi_1466 NC_015672.1 1566162 1566590 D PFAM: Domain of unknown function (DUF296); COGs: COG1102 Cytidylate kinase; KEGG: cni:Calni_0873 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1566162..1566590 Flexistipes sinusarabici DSM 4947 10815776 YP_004603685.1 CDS Flexsi_1467 NC_015672.1 1566565 1567275 R COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: dap:Dacet_1438 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; hypothetical protein complement(1566565..1567275) Flexistipes sinusarabici DSM 4947 10815777 YP_004603686.1 CDS Flexsi_1468 NC_015672.1 1567266 1567760 R PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: dap:Dacet_1440 pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase complement(1567266..1567760) Flexistipes sinusarabici DSM 4947 10815778 YP_004603687.1 CDS Flexsi_1469 NC_015672.1 1567815 1569200 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; InterPro IPR002133; KEGG: ddf:DEFDS_1515 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; dihydrolipoyl dehydrogenase complement(1567815..1569200) Flexistipes sinusarabici DSM 4947 10815779 YP_004603688.1 CDS Flexsi_1470 NC_015672.1 1569217 1570371 R PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; KEGG: ddf:DEFDS_1516 hypothetical protein; SPTR: Putative uncharacterized protein; S-adenosylmethionine synthase complement(1569217..1570371) Flexistipes sinusarabici DSM 4947 10815780 YP_004603689.1 CDS Flexsi_1471 NC_015672.1 1570435 1570662 R COGs: COG0456 Acetyltransferase; InterPro IPR006464:IPR000182; KEGG: cni:Calni_0878 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; hypothetical protein complement(1570435..1570662) Flexistipes sinusarabici DSM 4947 10815781 YP_004603690.1 CDS Flexsi_1472 NC_015672.1 1570613 1571092 R PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dap:Dacet_1445 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; ribosomal-protein-alanine acetyltransferase complement(1570613..1571092) Flexistipes sinusarabici DSM 4947 10815782 YP_004603691.1 CDS Flexsi_1473 NC_015672.1 1571082 1571657 R PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; COGs: COG0756 dUTPase; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; InterPro IPR008181:IPR008180; KEGG: cni:Calni_0915 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1; hypothetical protein complement(1571082..1571657) Flexistipes sinusarabici DSM 4947 10815783 YP_004603692.1 CDS Flexsi_1474 NC_015672.1 1571696 1572130 R PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087; KEGG: cni:Calni_1295 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; deoxyuridine 5'-triphosphate nucleotidohydrolase complement(1571696..1572130) Flexistipes sinusarabici DSM 4947 10815784 YP_004603693.1 CDS Flexsi_1475 NC_015672.1 1572167 1574266 R PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290:IPR000589; KEGG: ddf:DEFDS_1521 30S ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; polyribonucleotide nucleotidyltransferase complement(1572167..1574266) Flexistipes sinusarabici DSM 4947 10815785 YP_004603694.1 CDS Flexsi_1476 NC_015672.1 1574268 1574537 R PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR014780:IPR002501; KEGG: ddf:DEFDS_1522 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; 30S ribosomal protein S15 complement(1574268..1574537) Flexistipes sinusarabici DSM 4947 10815786 YP_004603695.1 CDS Flexsi_1477 NC_015672.1 1574614 1575513 R PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: cni:Calni_1298 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; tRNA pseudouridine synthase B complement(1574614..1575513) Flexistipes sinusarabici DSM 4947 10815787 YP_004603696.1 CDS Flexsi_1478 NC_015672.1 1575497 1575859 R PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: ddf:DEFDS_1524 hypothetical protein; PFAM: Protein of unknown function DUF503; SPTR: Putative uncharacterized protein; ribosome-binding factor A complement(1575497..1575859) Flexistipes sinusarabici DSM 4947 10815788 YP_004603697.1 CDS Flexsi_1479 NC_015672.1 1575859 1576140 R PFAM: Protein of unknown function (DUF503); COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR006847:IPR000795:IPR 004161; KEGG: ddf:DEFDS_1525 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; hypothetical protein complement(1575859..1576140) Flexistipes sinusarabici DSM 4947 10815789 YP_004603698.1 CDS Flexsi_1480 NC_015672.1 1576137 1578923 R PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; InterPro IPR007393; KEGG: ddf:DEFDS_1526 hypothetical protein; PFAM: Protein of unknown function DUF448; SPTR: Putative uncharacterized protein; manually curated; translation initiation factor IF-2 complement(1576137..1578923) Flexistipes sinusarabici DSM 4947 10815790 YP_004603699.1 CDS Flexsi_1481 NC_015672.1 1578937 1579512 R PFAM: Protein of unknown function (DUF448); COGs: COG0195 Transcription elongation factor; InterPro IPR010213:IPR013735:IPR003029:IPR004087; KEGG: ddf:DEFDS_1527 N utilization substance protein A; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; SPTR: N utilization substance protein A; TIGRFAM: Transcription termination factor NusA; hypothetical protein complement(1578937..1579512) Flexistipes sinusarabici DSM 4947 10815791 YP_004603700.1 CDS Flexsi_1482 NC_015672.1 1579517 1580875 R PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; HAMAP: Uncharacterised protein family UPF0090, bacteria; InterPro IPR003728:IPR020790; KEGG: ddf:DEFDS_1528 hypothetical protein; PFAM: Uncharacterised protein family UPF0090; SPTR: Ribosome maturation factor rimP; NusA antitermination factor complement(1579517..1580875) Flexistipes sinusarabici DSM 4947 10815792 YP_004603701.1 CDS Flexsi_1483 NC_015672.1 1580884 1581360 R PFAM: Uncharacterised BCR, YhbC family COG0779; KEGG: cni:Calni_0995 lipoprotein; SPTR: Putative lipoprotein; ribosome maturation factor rimP complement(1580884..1581360) Flexistipes sinusarabici DSM 4947 10815793 YP_004603702.1 CDS Flexsi_1484 NC_015672.1 1581763 1582437 R KEGG: cni:Calni_1389 hypothetical protein; SPTR: Putative uncharacterized protein; lipoprotein complement(1581763..1582437) Flexistipes sinusarabici DSM 4947 10815794 YP_004603703.1 CDS Flexsi_1485 NC_015672.1 1582618 1584060 D KEGG: cni:Calni_1388 lipoprotein; SPTR: Putative lipoprotein; hypothetical protein 1582618..1584060 Flexistipes sinusarabici DSM 4947 10815795 YP_004603704.1 CDS Flexsi_1486 NC_015672.1 1584116 1584694 D COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase; InterPro IPR000146; KEGG: ddf:DEFDS_1408 fructose-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase class 1; lipoprotein 1584116..1584694 Flexistipes sinusarabici DSM 4947 10815796 YP_004603705.1 CDS Flexsi_1487 NC_015672.1 1585076 1586068 D PFAM: Fructose-1-6-bisphosphatase; COGs: COG0648 Endonuclease IV; HAMAP: Endodeoxyribonuclease IV; InterPro IPR001719:IPR012307; KEGG: ddf:DEFDS_1407 endonuclease IV; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: Endodeoxyribonuclease IV; SPTR: Probable endonuclease 4; TIGRFAM: Endodeoxyribonuclease IV; fructose-1,6-bisphosphatase class 1 1585076..1586068 Flexistipes sinusarabici DSM 4947 10815797 YP_004603706.1 CDS Flexsi_1488 NC_015672.1 1586072 1586902 D PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1); COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: ddf:DEFDS_1406 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase hydrolase; endonuclease 4 1586072..1586902 Flexistipes sinusarabici DSM 4947 10815798 YP_004603707.1 CDS Flexsi_1489 NC_015672.1 1586908 1587423 D PFAM: Isochorismatase family; COGs: COG2187 conserved hypothetical protein; KEGG: ddf:DEFDS_1405 hypothetical protein; SPTR: Putative uncharacterized protein; isochorismatase hydrolase 1586908..1587423 Flexistipes sinusarabici DSM 4947 10815799 YP_004603708.1 CDS Flexsi_1490 NC_015672.1 1587420 1588961 D COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: ddf:DEFDS_1404 ribonuclease Z; SPTR: Ribonuclease Z; hypothetical protein 1587420..1588961 Flexistipes sinusarabici DSM 4947 10815800 YP_004603709.1 CDS Flexsi_1491 NC_015672.1 1588951 1589940 D COGs: COG2195 Di- and tripeptidase; InterPro IPR001160:IPR002933:IPR011650; KEGG: mac:MA2653 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; ribonuclease Z 1588951..1589940 Flexistipes sinusarabici DSM 4947 10815801 YP_004603710.1 CDS Flexsi_1492 NC_015672.1 1589946 1591334 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1576 heat shock protein Hsp20; PFAM: Heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; aminoacyl-histidine dipeptidase complement(1589946..1591334) Flexistipes sinusarabici DSM 4947 10815802 YP_004603711.1 CDS Flexsi_1493 NC_015672.1 1591893 1592348 D PFAM: Hsp20/alpha crystallin family; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ddf:DEFDS_0515 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; heat shock protein Hsp20 1591893..1592348 Flexistipes sinusarabici DSM 4947 10815803 YP_004603712.1 CDS Flexsi_1494 NC_015672.1 1592377 1593783 R PFAM: Phospholipase D Active site motif; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR005911:IPR007197:IPR006638; KEGG: ddf:DEFDS_0514 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP01212; phospholipase D/transphosphatidylase complement(1592377..1593783) Flexistipes sinusarabici DSM 4947 10815804 YP_004603713.1 CDS Flexsi_1495 NC_015672.1 1593780 1594673 R PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; COGs: COG1565 conserved hypothetical protein; InterPro IPR003788; KEGG: ddf:DEFDS_1262 hypothetical protein; PFAM: Protein of unknown function DUF185; SPTR: Putative uncharacterized protein; hypothetical protein complement(1593780..1594673) Flexistipes sinusarabici DSM 4947 10815805 YP_004603714.1 CDS Flexsi_1496 NC_015672.1 1594679 1595809 R PFAM: Uncharacterized ACR, COG1565; KEGG: ddf:DEFDS_1263 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1594679..1595809) Flexistipes sinusarabici DSM 4947 10815806 YP_004603715.1 CDS Flexsi_1497 NC_015672.1 1595816 1596568 R COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: ddf:DEFDS_1264 biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; hypothetical protein complement(1595816..1596568) Flexistipes sinusarabici DSM 4947 10815807 YP_004603716.1 CDS Flexsi_1498 NC_015672.1 1596565 1596966 R PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: ddf:DEFDS_1265 biopolymer transport protein, ExbB/TolQ family; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Biopolymer transport protein, ExbB/TolQ family; biopolymer transport protein ExbD/TolR complement(1596565..1596966) Flexistipes sinusarabici DSM 4947 10815808 YP_004603717.1 CDS Flexsi_1499 NC_015672.1 1596963 1597574 R PFAM: MotA/TolQ/ExbB proton channel family; KEGG: cni:Calni_0635 hypothetical protein; SPTR: Putative uncharacterized protein; MotA/TolQ/ExbB proton channel complement(1596963..1597574) Flexistipes sinusarabici DSM 4947 10815809 YP_004603718.1 CDS Flexsi_1500 NC_015672.1 1597575 1600250 R COGs: COG0496 acid phosphatase; HAMAP: Multifunctional protein surE; InterPro IPR002828; KEGG: ddf:DEFDS_1267 stationary-phase survival protein; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; hypothetical protein complement(1597575..1600250) Flexistipes sinusarabici DSM 4947 10815810 YP_004603719.1 CDS Flexsi_1501 NC_015672.1 1600387 1601157 R PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099; KEGG: ddf:DEFDS_0705 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: CoA-disulfide reductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; multifunctional protein surE complement(1600387..1601157) Flexistipes sinusarabici DSM 4947 10815811 YP_004603720.1 CDS Flexsi_1502 NC_015672.1 1601399 1602724 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1342 DNA-binding protein; HAMAP: UPF0251 protein; InterPro IPR002852; KEGG: ddf:DEFDS_1700 hypothetical protein; PFAM: Uncharacterised protein family UPF0251; SPTR: UPF0251 protein DEFDS_1700; CoA-disulfide reductase complement(1601399..1602724) Flexistipes sinusarabici DSM 4947 10815812 YP_004603721.1 CDS Flexsi_1503 NC_015672.1 1603149 1603631 D PFAM: Protein of unknown function DUF134; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311:IPR006963:IPR006656:IPR006657; KEGG: ddf:DEFDS_1699 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; hypothetical protein 1603149..1603631 Flexistipes sinusarabici DSM 4947 10815813 YP_004603722.1 CDS Flexsi_1504 NC_015672.1 1603835 1606159 D PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_1698 molybdopterin oxidoreductase 4Fe-4S ferredoxin, iron-sulfur binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Molybdopterin oxidoreductase, 4Fe-4S ferredoxin, iron-sulfur binding protein; trimethylamine-N-oxide reductase (cytochrome c) 1603835..1606159 Flexistipes sinusarabici DSM 4947 10815814 YP_004603723.1 CDS Flexsi_1505 NC_015672.1 1606178 1606798 D PFAM: 4Fe-4S binding domain; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: ddf:DEFDS_1697 molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoreductase, membrane subunit; 4Fe-4S ferredoxin 1606178..1606798 Flexistipes sinusarabici DSM 4947 10815815 YP_004603724.1 CDS Flexsi_1506 NC_015672.1 1606808 1607986 D PFAM: Polysulphide reductase, NrfD; COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: ddf:DEFDS_1685 iron-molybdenum cofactor-binding protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; SPTR: Iron-molybdenum cofactor-binding protein; polysulfide reductase NrfD 1606808..1607986 Flexistipes sinusarabici DSM 4947 10815816 YP_004603725.1 CDS Flexsi_1507 NC_015672.1 1608022 1608378 R PFAM: Dinitrogenase iron-molybdenum cofactor; dinitrogenase iron-molybdenum cofactor biosynthesis protein complement(1608022..1608378) Flexistipes sinusarabici DSM 4947 10815817 YP_004603726.1 CDS Flexsi_1508 NC_015672.1 1608353 1608562 R COGs: COG1342 DNA-binding protein; HAMAP: UPF0251 protein; InterPro IPR002852; KEGG: ddf:DEFDS_1690 hypothetical protein; PFAM: Uncharacterised protein family UPF0251; SPTR: UPF0251 protein DEFDS_1690; hypothetical protein complement(1608353..1608562) Flexistipes sinusarabici DSM 4947 10815818 YP_004603727.1 CDS Flexsi_1509 NC_015672.1 1608573 1608941 R PFAM: Protein of unknown function DUF134; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: ddf:DEFDS_1691 molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoreductase, membrane subunit; hypothetical protein complement(1608573..1608941) Flexistipes sinusarabici DSM 4947 10815819 YP_004603728.1 CDS Flexsi_1510 NC_015672.1 1609036 1610223 R PFAM: Polysulphide reductase, NrfD; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_1692 molybdopterin oxidoreductase 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Molybdopterin oxidoreductase, 4Fe-4S ferredoxin; polysulfide reductase NrfD complement(1609036..1610223) Flexistipes sinusarabici DSM 4947 10815820 YP_004603729.1 CDS Flexsi_1511 NC_015672.1 1610239 1610790 R PFAM: 4Fe-4S binding domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311:IPR006963:IPR006656:IPR006657; KEGG: ddf:DEFDS_1693 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; 4Fe-4S ferredoxin complement(1610239..1610790) Flexistipes sinusarabici DSM 4947 10815821 YP_004603730.1 CDS Flexsi_1512 NC_015672.1 1610802 1613132 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; nitrate reductase complement(1610802..1613132) Flexistipes sinusarabici DSM 4947 10815822 YP_004603731.1 CDS Flexsi_1513 NC_015672.1 1613815 1614864 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG1533 DNA repair photolyase; KEGG: ddf:DEFDS_1338 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(1613815..1614864) Flexistipes sinusarabici DSM 4947 10815823 YP_004603732.1 CDS Flexsi_1514 NC_015672.1 1615023 1616051 R KEGG: dap:Dacet_2224 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1615023..1616051) Flexistipes sinusarabici DSM 4947 10815824 YP_004603733.1 CDS Flexsi_1515 NC_015672.1 1616038 1616904 R COGs: COG0552 Signal recognition particle GTPase; InterPro IPR004390:IPR013822:IPR000897:IPR003593; KEGG: ddf:DEFDS_1340 signal recognition particle receptor FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle receptor FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY; hypothetical protein complement(1616038..1616904) Flexistipes sinusarabici DSM 4947 10815825 YP_004603734.1 CDS Flexsi_1516 NC_015672.1 1616861 1618057 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR011890:IPR003395; KEGG: ddf:DEFDS_1341 chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: Chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; signal recognition particle-docking protein FtsY complement(1616861..1618057) Flexistipes sinusarabici DSM 4947 10815826 YP_004603735.1 CDS Flexsi_1517 NC_015672.1 1618081 1621494 R PFAM: RecF/RecN/SMC N terminal domain; COGs: COG1048 Aconitase A; InterPro IPR006249:IPR001030:IPR000573; KEGG: cni:Calni_1064 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: Aconitate hydratase; SPTR: Aconitate hydratase; TIGRFAM: Aconitase/iron regulatory protein 2; chromosome segregation protein SMC complement(1618081..1621494) Flexistipes sinusarabici DSM 4947 10815827 YP_004603736.1 CDS Flexsi_1518 NC_015672.1 1621954 1624680 R PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; InterPro IPR001623; KEGG: cni:Calni_1269 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein DnaJ domain protein; aconitate hydratase 1 complement(1621954..1624680) Flexistipes sinusarabici DSM 4947 10815828 YP_004603737.1 CDS Flexsi_1519 NC_015672.1 1624760 1627159 R PFAM: DnaJ domain; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: ddf:DEFDS_1499 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase; PRIAM: Inositol-phosphate phosphatase; SPTR: Inositol-phosphate phosphatase; heat shock protein DnaJ domain-containing protein complement(1624760..1627159) Flexistipes sinusarabici DSM 4947 10815829 YP_004603738.1 CDS Flexsi_1520 NC_015672.1 1627167 1627940 R PFAM: Inositol monophosphatase family; COGs: COG1485 ATPase; InterPro IPR005654; KEGG: cni:Calni_1271 afg1-family atpase; PFAM: ATPase, AFG1-like; SPTR: AFG1-family ATPase; inositol-phosphate phosphatase complement(1627167..1627940) Flexistipes sinusarabici DSM 4947 10815830 YP_004603739.1 CDS Flexsi_1521 NC_015672.1 1628138 1629211 R PFAM: AFG1-like ATPase; COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: ddf:DEFDS_0806 hypothetical protein; PFAM: Uncharacterised conserved protein UCP018688; SPTR: Putative uncharacterized protein; AFG1 family ATPase complement(1628138..1629211) Flexistipes sinusarabici DSM 4947 10815831 YP_004603740.1 CDS Flexsi_1522 NC_015672.1 1629576 1630424 R PFAM: Uncharacterized conserved protein (DUF2156); COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: ddf:DEFDS_0807 multidrug resistance protein, MATE family; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: Multidrug resistance protein, MATE family; TIGRFAM: Multi antimicrobial extrusion protein MatE; manually curated; hypothetical protein complement(1629576..1630424) Flexistipes sinusarabici DSM 4947 10815832 YP_004603741.1 CDS Flexsi_1523 NC_015672.1 1630414 1631745 R PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; InterPro IPR002541; KEGG: dap:Dacet_2906 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; MATE efflux family protein complement(1630414..1631745) Flexistipes sinusarabici DSM 4947 10815833 YP_004603742.1 CDS Flexsi_1524 NC_015672.1 1631866 1632654 D PFAM: Cytochrome C assembly protein; COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343:IPR015895:IPR006151:IPR015896; KEGG: cni:Calni_1982 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; cytochrome c assembly protein 1631866..1632654 Flexistipes sinusarabici DSM 4947 10815834 YP_004603743.1 CDS Flexsi_1525 NC_015672.1 1632658 1633929 D PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; COGs: COG0181 Porphobilinogen deaminase; HAMAP: Porphobilinogen deaminase; InterPro IPR000860; KEGG: ddf:DEFDS_0810 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; SPTR: Porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; glutamyl-tRNA reductase 1632658..1633929 Flexistipes sinusarabici DSM 4947 10815835 YP_004603744.1 CDS Flexsi_1526 NC_015672.1 1633926 1634852 D PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: ddf:DEFDS_0811 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; PRIAM: Uroporphyrinogen-III synthase; SPTR: Uroporphyrinogen-III synthase; porphobilinogen deaminase 1633926..1634852 Flexistipes sinusarabici DSM 4947 10815836 YP_004603745.1 CDS Flexsi_1527 NC_015672.1 1634806 1635591 D PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: ddf:DEFDS_0812 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; uroporphyrinogen-III synthase 1634806..1635591 Flexistipes sinusarabici DSM 4947 10815837 YP_004603746.1 CDS Flexsi_1528 NC_015672.1 1635588 1636556 D PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533:IPR003593; KEGG: ddf:DEFDS_0813 hypothetical protein; PFAM: Protein of unknown function DUF815; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; porphobilinogen synthase 1635588..1636556 Flexistipes sinusarabici DSM 4947 10815838 YP_004603747.1 CDS Flexsi_1529 NC_015672.1 1636569 1637333 D PFAM: Protein of unknown function (DUF815); COGs: COG0517 FOG: CBS domain; InterPro IPR000644:IPR002912; KEGG: dvm:DvMF_1585 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein; hypothetical protein 1636569..1637333 Flexistipes sinusarabici DSM 4947 10815839 YP_004603748.1 CDS Flexsi_1530 NC_015672.1 1637323 1637967 R PFAM: CBS domain; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: afw:Anae109_1451 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; hypothetical protein complement(1637323..1637967) Flexistipes sinusarabici DSM 4947 10815840 YP_004603749.1 CDS Flexsi_1531 NC_015672.1 1637986 1638693 R PFAM: ABC transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: axy:AXYL_03133 ABC transporter family protein 47; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter family protein 47; phosphonate-transporting ATPase complement(1637986..1638693) Flexistipes sinusarabici DSM 4947 10815841 YP_004603750.1 CDS Flexsi_1532 NC_015672.1 1638705 1639460 R PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: nha:Nham_3647 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; monosaccharide-transporting ATPase complement(1638705..1639460) Flexistipes sinusarabici DSM 4947 10815842 YP_004603751.1 CDS Flexsi_1533 NC_015672.1 1639464 1640423 R PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tye:THEYE_A0767 branched-chain amino acid ABC transporter, permease protein; PFAM: Bacterial inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; ABC transporter complement(1639464..1640423) Flexistipes sinusarabici DSM 4947 10815843 YP_004603752.1 CDS Flexsi_1534 NC_015672.1 1640428 1641285 R PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: bmr:BMI_II1199 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; PFAM: Extracellular ligand-binding receptor; SPTR: Putative uncharacterized protein; ABC transporter complement(1640428..1641285) Flexistipes sinusarabici DSM 4947 10815844 YP_004603753.1 CDS Flexsi_1535 NC_015672.1 1641353 1642558 R PFAM: Receptor family ligand binding region; COGs: COG0628 permease; InterPro IPR002549; KEGG: dol:Dole_2006 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: Putative uncharacterized protein; extracellular ligand-binding receptor complement(1641353..1642558) Flexistipes sinusarabici DSM 4947 10815845 YP_004603754.1 CDS Flexsi_1536 NC_015672.1 1642971 1644056 R PFAM: Domain of unknown function DUF20; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014189:IPR013154:IPR013149; KEGG: gur:Gura_0180 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SPTR: Alcohol dehydrogenase, zinc-binding domain protein; TIGRFAM: Quinone oxidoreductase putative, PIG3; hypothetical protein complement(1642971..1644056) Flexistipes sinusarabici DSM 4947 10815846 YP_004603755.1 CDS Flexsi_1537 NC_015672.1 1644327 1645316 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family; COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: ddf:DEFDS_1125 hypothetical protein; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region; SPTR: Putative uncharacterized protein; NAD(P)H quinone oxidoreductase 1644327..1645316 Flexistipes sinusarabici DSM 4947 10815847 YP_004603756.1 CDS Flexsi_1538 NC_015672.1 1645348 1646196 R PFAM: Diacylglycerol kinase catalytic domain; KEGG: ddf:DEFDS_1124 hypothetical protein; SPTR: Putative uncharacterized protein; diacylglycerol kinase catalytic subunit complement(1645348..1646196) Flexistipes sinusarabici DSM 4947 10815848 YP_004603757.1 CDS Flexsi_1539 NC_015672.1 1646446 1647072 R COGs: COG2107 periplasmic solute-binding protein; InterPro IPR003794; KEGG: ddf:DEFDS_1123 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1646446..1647072) Flexistipes sinusarabici DSM 4947 10815849 YP_004603758.1 CDS Flexsi_1540 NC_015672.1 1647079 1647870 R PFAM: Putative periplasminc binding protein (DUF178); COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: ddf:DEFDS_1121 ABC transporter substrate-binding protein; PFAM: Mammalian cell entry related; SPTR: ABC transporter, substrate-binding protein; hypothetical protein complement(1647079..1647870) Flexistipes sinusarabici DSM 4947 10815850 YP_004603759.1 CDS Flexsi_1541 NC_015672.1 1647910 1649481 R PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0909 abc transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; mammalian cell entry domain-containing protein complement(1647910..1649481) Flexistipes sinusarabici DSM 4947 10815851 YP_004603760.1 CDS Flexsi_1542 NC_015672.1 1649498 1650268 R PFAM: ABC transporter; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: ddf:DEFDS_1119 ABC transporter permease; PFAM: Protein of unknown function DUF140; SPTR: ABC transporter, permease; TIGRFAM: Protein of unknown function DUF140; sulfate-transporting ATPase complement(1649498..1650268) Flexistipes sinusarabici DSM 4947 10815852 YP_004603761.1 CDS Flexsi_1543 NC_015672.1 1650281 1651051 R PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821:IPR001608:IPR011079; KEGG: ddf:DEFDS_1118 alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: Alanine racemase; hypothetical protein complement(1650281..1651051) Flexistipes sinusarabici DSM 4947 10815853 YP_004603762.1 CDS Flexsi_1544 NC_015672.1 1651074 1652171 R PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG1186 Protein chain release factor B; HAMAP: Peptide chain release factor 2, bacterial; InterPro IPR004374:IPR005139:IPR000352:IPR020853; KEGG: ddf:DEFDS_1117 peptide chain release factor RF-2; PFAM: Class I peptide chain release factor; Peptide chain release factor; SPTR: Peptide chain release factor 2; TIGRFAM: Peptide chain release factor 2; alanine racemase complement(1651074..1652171) Flexistipes sinusarabici DSM 4947 10815854 YP_004603763.1 CDS Flexsi_1545 NC_015672.1 1652161 1653273 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: dap:Dacet_1409 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; peptide chain release factor 2 complement(1652161..1653273) Flexistipes sinusarabici DSM 4947 10815855 YP_004603764.1 CDS Flexsi_1546 NC_015672.1 1653320 1653784 R PFAM: Acetyltransferase (GNAT) family; KEGG: ddf:DEFDS_1114 hypothetical protein; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 complement(1653320..1653784) Flexistipes sinusarabici DSM 4947 10815856 YP_004603765.1 CDS Flexsi_1547 NC_015672.1 1653781 1654173 R InterPro IPR000620; KEGG: cni:Calni_1273 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(1653781..1654173) Flexistipes sinusarabici DSM 4947 10815857 YP_004603766.1 CDS Flexsi_1548 NC_015672.1 1654772 1655611 R PFAM: EamA-like transporter family; COGs: COG0372 Citrate synthase; InterPro IPR002020; KEGG: ddf:DEFDS_0814 citrate synthase; PFAM: Citrate synthase-like; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; hypothetical protein complement(1654772..1655611) Flexistipes sinusarabici DSM 4947 10815858 YP_004603767.1 CDS Flexsi_1549 NC_015672.1 1655897 1657204 D PFAM: Citrate synthase; TIGRFAM: citrate (Si)-synthase, eukaryotic; KEGG: ddf:DEFDS_0696 hypothetical protein; SPTR: Putative uncharacterized protein; citrate (Si)-synthase 1655897..1657204 Flexistipes sinusarabici DSM 4947 10815859 YP_004603768.1 CDS Flexsi_1550 NC_015672.1 1657414 1658220 R COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: ddf:DEFDS_0735 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase; hypothetical protein complement(1657414..1658220) Flexistipes sinusarabici DSM 4947 10815860 YP_004603769.1 CDS Flexsi_1551 NC_015672.1 1658278 1659708 D PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; InterPro IPR001272; KEGG: ddf:DEFDS_1461 phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; PRIAM: Phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 1658278..1659708 Flexistipes sinusarabici DSM 4947 10815861 YP_004603770.1 CDS Flexsi_1552 NC_015672.1 1659836 1661431 R PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); InterPro IPR003615:IPR002711; KEGG: cni:Calni_0828 hnh endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; phosphoenolpyruvate carboxykinase (ATP) complement(1659836..1661431) Flexistipes sinusarabici DSM 4947 10815862 YP_004603771.1 CDS Flexsi_1553 NC_015672.1 1661494 1661811 D PFAM: HNH endonuclease; COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164:IPR012947:IPR003156:IPR002318; KEGG: ddf:DEFDS_1463 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; HNH endonuclease 1661494..1661811 Flexistipes sinusarabici DSM 4947 10815863 YP_004603772.1 CDS Flexsi_1554 NC_015672.1 1661811 1664429 D PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; KEGG: ddf:DEFDS_1923 hypothetical protein; SPTR: Putative uncharacterized protein; alanyl-tRNA synthetase 1661811..1664429 Flexistipes sinusarabici DSM 4947 10815864 YP_004603773.1 CDS Flexsi_1555 NC_015672.1 1664446 1664814 D PFAM: Poly(hydroxyalcanoate) granule associated protein (phasin); TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; InterPro IPR000086; KEGG: ddf:DEFDS_1922 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; hypothetical protein 1664446..1664814 Flexistipes sinusarabici DSM 4947 10815865 YP_004603774.1 CDS Flexsi_1556 NC_015672.1 1664789 1665430 D PFAM: NUDIX domain; COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR007780; KEGG: ddf:DEFDS_1921 NAD-glutamate dehydrogenase; PFAM: Bacterial NAD-glutamate dehydrogenase; SPTR: NAD-glutamate dehydrogenase; NUDIX hydrolase 1664789..1665430 Flexistipes sinusarabici DSM 4947 10815866 YP_004603775.1 CDS Flexsi_1557 NC_015672.1 1665612 1670309 D PFAM: Bacterial NAD-glutamate dehydrogenase; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: ddf:DEFDS_0496 peptidase M16 family; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; PRIAM: processing peptidase; SPTR: Peptidase, M16 family; NAD-glutamate dehydrogenase 1665612..1670309 Flexistipes sinusarabici DSM 4947 10815867 YP_004603776.1 CDS Flexsi_1558 NC_015672.1 1670376 1671611 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; InterPro IPR002818; KEGG: ddf:DEFDS_1436 sigma cross-reacting protein 27A; PFAM: ThiJ/PfpI; SPTR: Sigma cross-reacting protein 27A; processing peptidase 1670376..1671611 Flexistipes sinusarabici DSM 4947 10815868 YP_004603777.1 CDS Flexsi_1559 NC_015672.1 1671715 1672377 R PFAM: DJ-1/PfpI family; KEGG: cni:Calni_1011 hypothetical protein; SPTR: Putative uncharacterized protein; ThiJ/PfpI domain-containing protein complement(1671715..1672377) Flexistipes sinusarabici DSM 4947 10815869 YP_004603778.1 CDS Flexsi_1560 NC_015672.1 1672789 1673889 R PFAM: Protein of unknown function, DUF400; KEGG: cni:Calni_1012 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1672789..1673889) Flexistipes sinusarabici DSM 4947 10815870 YP_004603779.1 CDS Flexsi_1561 NC_015672.1 1673920 1675116 R PFAM: Curli production assembly/transport component CsgG; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122:IPR005273; KEGG: dap:Dacet_1557 phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; hypothetical protein complement(1673920..1675116) Flexistipes sinusarabici DSM 4947 10815871 YP_004603780.1 CDS Flexsi_1562 NC_015672.1 1675189 1675857 R PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: cni:Calni_1014 phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase; PFAM: Flavoprotein; DNA/pantothenate metabolism flavoprotein, C-terminal; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phage SPO1 DNA polymerase-like protein complement(1675189..1675857) Flexistipes sinusarabici DSM 4947 10815872 YP_004603781.1 CDS Flexsi_1563 NC_015672.1 1676058 1677263 R PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; InterPro IPR006110:IPR003716; KEGG: dap:Dacet_1559 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; SPTR: DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase complement(1676058..1677263) Flexistipes sinusarabici DSM 4947 10815873 YP_004603782.1 CDS Flexsi_1564 NC_015672.1 1677256 1677489 R PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR008145:IPR008144:IPR017665; KEGG: cni:Calni_1016 guanylate kinase; PFAM: Guanylate kinase; PRIAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; DNA-directed RNA polymerase subunit omega complement(1677256..1677489) Flexistipes sinusarabici DSM 4947 10815874 YP_004603783.1 CDS Flexsi_1565 NC_015672.1 1677490 1678119 R PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: dap:Dacet_1561 hypothetical protein; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; guanylate kinase complement(1677490..1678119) Flexistipes sinusarabici DSM 4947 10815875 YP_004603784.1 CDS Flexsi_1566 NC_015672.1 1678112 1678981 R PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: ddf:DEFDS_1430 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1678112..1678981) Flexistipes sinusarabici DSM 4947 10815876 YP_004603785.1 CDS Flexsi_1567 NC_015672.1 1679058 1679843 D PFAM: SPFH domain / Band 7 family; hypothetical protein 1679058..1679843 Flexistipes sinusarabici DSM 4947 10815877 YP_004603786.1 CDS Flexsi_1568 NC_015672.1 1680581 1682482 D PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: ddf:DEFDS_0562 LrgA family protein; PFAM: LrgA; SPTR: LrgA family protein; PpiC-type peptidyl-prolyl cis-trans isomerase 1680581..1682482 Flexistipes sinusarabici DSM 4947 10815879 YP_004603787.1 CDS Flexsi_1569 NC_015672.1 1682716 1683063 D PFAM: LrgA family; COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300:IPR005261; KEGG: ddf:DEFDS_0561 LrgB family protein; PFAM: LrgB-like protein; SPTR: LrgB family protein; TIGRFAM: Conserved hypothetical protein CHP00659; LrgA family protein 1682716..1683063 Flexistipes sinusarabici DSM 4947 10815880 YP_004603788.1 CDS Flexsi_1570 NC_015672.1 1683056 1683748 D PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: cni:Calni_0640 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; hypothetical protein 1683056..1683748 Flexistipes sinusarabici DSM 4947 10815881 YP_004603789.1 CDS Flexsi_1571 NC_015672.1 1683745 1684530 D PFAM: RNA pseudouridylate synthase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099; KEGG: gem:GM21_2049 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: CoA-disulfide reductase; SPTR: Pyridine nucleotide-disulphide oxidoreductase dimerisation region; pseudouridine synthase 1683745..1684530 Flexistipes sinusarabici DSM 4947 10815882 YP_004603790.1 CDS Flexsi_1572 NC_015672.1 1684569 1685900 D PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cni:Calni_0845 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; CoA-disulfide reductase 1684569..1685900 Flexistipes sinusarabici DSM 4947 10815883 YP_004603791.1 CDS Flexsi_1573 NC_015672.1 1685916 1686359 D PFAM: Universal stress protein family; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: cni:Calni_0514 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; UspA domain-containing protein 1685916..1686359 Flexistipes sinusarabici DSM 4947 10815884 YP_004603792.1 CDS Flexsi_1574 NC_015672.1 1686433 1687686 R PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: cni:Calni_1071 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; diaminopimelate decarboxylase complement(1686433..1687686) Flexistipes sinusarabici DSM 4947 10815885 YP_004603793.1 CDS Flexsi_1575 NC_015672.1 1687916 1688188 R PFAM: Bacterial DNA-binding protein; COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR018484:IPR018485:IPR005999; KEGG: dsa:Desal_3151 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; histone family protein DNA-binding protein complement(1687916..1688188) Flexistipes sinusarabici DSM 4947 10815886 YP_004603794.1 CDS Flexsi_1576 NC_015672.1 1688463 1689962 D PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; KEGG: hel:HELO_1656 hypothetical protein; SPTR: Putative uncharacterized protein; glycerol kinase 1688463..1689962 Flexistipes sinusarabici DSM 4947 10815887 YP_004603795.1 CDS Flexsi_1577 NC_015672.1 1690199 1690471 D COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: cni:Calni_0058 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; manually curated; hypothetical protein 1690199..1690471 Flexistipes sinusarabici DSM 4947 10815888 YP_004603796.1 CDS Flexsi_1578 NC_015672.1 1690506 1692134 D PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1690506..1692134 Flexistipes sinusarabici DSM 4947 10815889 YP_004603797.1 CDS Flexsi_1579 NC_015672.1 1692362 1692910 R hypothetical protein complement(1692362..1692910) Flexistipes sinusarabici DSM 4947 10815890 YP_004603798.1 CDS Flexsi_1580 NC_015672.1 1693820 1694500 R COGs: COG2378 transcriptional regulator protein; KEGG: ddf:DEFDS_0885 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1693820..1694500) Flexistipes sinusarabici DSM 4947 10815891 YP_004603799.1 CDS Flexsi_1581 NC_015672.1 1694961 1695875 R hypothetical protein complement(1694961..1695875) Flexistipes sinusarabici DSM 4947 10815892 YP_004603800.1 CDS Flexsi_1582 NC_015672.1 1695893 1696234 R KEGG: tai:Taci_1486 protein of unknown function DUF262; SPTR: Putative uncharacterized protein; hypothetical protein complement(1695893..1696234) Flexistipes sinusarabici DSM 4947 10815893 YP_004603801.1 CDS Flexsi_1583 NC_015672.1 1696328 1696960 D KEGG: ddf:DEFDS_0890 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1696328..1696960 Flexistipes sinusarabici DSM 4947 10815894 YP_004603802.1 CDS Flexsi_1584 NC_015672.1 1697021 1697518 R KEGG: pin:Ping_2476 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1697021..1697518) Flexistipes sinusarabici DSM 4947 10815895 YP_004603803.1 CDS Flexsi_1585 NC_015672.1 1697556 1698053 R SPTR: Putative uncharacterized protein; hypothetical protein complement(1697556..1698053) Flexistipes sinusarabici DSM 4947 10815896 YP_004603804.1 CDS Flexsi_1586 NC_015672.1 1698156 1698422 R COGs: COG1672 ATPase (AAA+ superfamily); InterPro IPR011579:IPR004256; KEGG: saf:SULAZ_0007 ATPase; SPTR: ATPase; hypothetical protein complement(1698156..1698422) Flexistipes sinusarabici DSM 4947 10815897 YP_004603805.1 CDS Flexsi_1587 NC_015672.1 1698625 1700028 D PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: nth:Nther_0840 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent nuclease subunit B-like protein; ATPase 1698625..1700028 Flexistipes sinusarabici DSM 4947 10815898 YP_004603806.1 CDS Flexsi_1588 NC_015672.1 1700230 1703247 D COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: nth:Nther_0841 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; ATP-dependent nuclease subunit B-like protein 1700230..1703247 Flexistipes sinusarabici DSM 4947 10815899 YP_004603807.1 CDS Flexsi_1589 NC_015672.1 1703240 1706488 D PFAM: UvrD/REP helicase; InterPro IPR007159; KEGG: aac:Aaci_0601 SpoVT/AbrB domain protein; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Virulence associated protein B; UvrD/REP helicase 1703240..1706488 Flexistipes sinusarabici DSM 4947 10815900 YP_004603808.1 CDS Flexsi_1590 NC_015672.1 1706614 1706841 D PFAM: SpoVT / AbrB like domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: dap:Dacet_0540 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: Virulence associated protein C; SpoVT/AbrB domain-containing protein 1706614..1706841 Flexistipes sinusarabici DSM 4947 10815901 YP_004603809.1 CDS Flexsi_1591 NC_015672.1 1706842 1707243 D PFAM: PIN domain; PilT protein domain-containing protein 1706842..1707243 Flexistipes sinusarabici DSM 4947 10815902 YP_004603810.1 CDS Flexsi_1592 NC_015672.1 1707265 1707711 D InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 1707265..1707711 Flexistipes sinusarabici DSM 4947 10815903 YP_004603811.1 CDS Flexsi_1593 NC_015672.1 1707787 1709154 R PFAM: Transposase domain (DUF772); transposase IS4 family protein complement(1707787..1709154) Flexistipes sinusarabici DSM 4947 10815904 YP_004603812.1 CDS Flexsi_1594 NC_015672.1 1710506 1710703 D KEGG: cni:Calni_1608 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1710506..1710703 Flexistipes sinusarabici DSM 4947 10815905 YP_004603813.1 CDS Flexsi_1595 NC_015672.1 1712961 1713365 R COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR010172; KEGG: sat:SYN_02247 putative cytoplasmic protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein, TM1791; hypothetical protein complement(1712961..1713365) Flexistipes sinusarabici DSM 4947 10815906 YP_004603814.1 CDS Flexsi_1596 NC_015672.1 1713352 1714668 R PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6; InterPro IPR010160; KEGG: sat:SYN_02248 putative cytoplasmic protein; PFAM: CRISPR-associated protein, TM1791.1; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein, TM1791.1; Cmr6 family CRISPR-associated RAMP protein complement(1713352..1714668) Flexistipes sinusarabici DSM 4947 10815907 YP_004603815.1 CDS Flexsi_1597 NC_015672.1 1714652 1715074 R PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr5; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013410; KEGG: sat:SYN_02249 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical exported protein; TIGRFAM: CRISPR-associated RAMP Cmr4; Cmr5 family CRISPR-associated protein complement(1714652..1715074) Flexistipes sinusarabici DSM 4947 10815908 YP_004603816.1 CDS Flexsi_1598 NC_015672.1 1715071 1716024 R PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4; COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR019117; KEGG: sat:SYN_02250 putative cytoplasmic protein; PFAM: CRISPR-associated protein, Cmr3; SPTR: Hypothetical cytosolic protein; Cmr4 family CRISPR-associated RAMP protein complement(1715071..1716024) Flexistipes sinusarabici DSM 4947 10815909 YP_004603817.1 CDS Flexsi_1599 NC_015672.1 1716040 1716948 R PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr3; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR013407; KEGG: sat:SYN_02251 HD superfamily hydrolase; SPTR: Hydrolase of the HD superfamily; TIGRFAM: CRISPR-associated protein Crm2; CRISPR-associated protein, Cmr3 complement(1716040..1716948) Flexistipes sinusarabici DSM 4947 10815910 YP_004603818.1 CDS Flexsi_1600 NC_015672.1 1716941 1719643 R PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; COGs: COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR007522; KEGG: sat:SYN_02252 putative cytoplasmic protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein TM1795 family, N-terminal; Crm2 family CRISPR-associated protein complement(1716941..1719643) Flexistipes sinusarabici DSM 4947 10815911 YP_004603819.1 CDS Flexsi_1601 NC_015672.1 1719634 1720527 R PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr1; InterPro IPR011742:IPR013383; KEGG: ttm:Tthe_2633 CRISPR-associated protein, TM1812 family; PFAM: CRISPR-associated protein, TM1812; SPTR: CRISPR-associated protein, TM1812 family; TIGRFAM: CRISPR-associated protein, TM1812; CRISPR-associated protein DxTHG, conserved site; CRISPR-associated protein TM1795 family protein complement(1719634..1720527) Flexistipes sinusarabici DSM 4947 10815912 YP_004603820.1 CDS Flexsi_1602 NC_015672.1 1720528 1721787 R PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein; KEGG: cni:Calni_1615 crispr-associated protein cas6; SPTR: CRISPR-associated protein Cas6; CRISPR-associated protein complement(1720528..1721787) Flexistipes sinusarabici DSM 4947 10815913 YP_004603821.1 CDS Flexsi_1603 NC_015672.1 1721780 1722691 R PFAM: Uncharacterized conserved protein (DUF2276); InterPro IPR002059; KEGG: cni:Calni_1600 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SPTR: Putative uncharacterized protein; crispr-associated protein cas6 complement(1721780..1722691) Flexistipes sinusarabici DSM 4947 10815914 YP_004603822.1 CDS Flexsi_1604 NC_015672.1 1722809 1724224 D PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cni:Calni_1597 crispr-associated protein cas2; SPTR: CRISPR-associated protein Cas2; TIGRFAM: Protein of unknown function DUF196; cold-shock protein 1722809..1724224 Flexistipes sinusarabici DSM 4947 10815915 YP_004603823.1 CDS Flexsi_1605 NC_015672.1 1724225 1724506 R PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: cni:Calni_1599 crispr-associated protein cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas2 complement(1724225..1724506) Flexistipes sinusarabici DSM 4947 10815916 YP_004603824.1 CDS Flexsi_1606 NC_015672.1 1724503 1725513 R PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; COGs: COG4951 conserved hypothetical protein; KEGG: cni:Calni_1598 DNA primase small subunit; SPTR: DNA primase small subunit; CRISPR-associated protein Cas1 complement(1724503..1725513) Flexistipes sinusarabici DSM 4947 10815917 YP_004603825.1 CDS Flexsi_1607 NC_015672.1 1725510 1727267 R KEGG: cni:Calni_1607 hypothetical protein; SPTR: Putative uncharacterized protein; DNA primase small subunit complement(1725510..1727267) Flexistipes sinusarabici DSM 4947 10815918 YP_004603826.1 CDS Flexsi_1608 NC_015672.1 1727385 1727696 D InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 1727385..1727696 Flexistipes sinusarabici DSM 4947 10815919 YP_004603827.1 CDS Flexsi_1609 NC_015672.1 1727895 1729214 R PFAM: Transposase DDE domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein complement(1727895..1729214) Flexistipes sinusarabici DSM 4947 10815920 YP_004603828.1 CDS Flexsi_1610 NC_015672.1 1729518 1730567 R PFAM: Transposase DDE domain; Transposase domain (DUF772); KEGG: cni:Calni_1606 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(1729518..1730567) Flexistipes sinusarabici DSM 4947 10815921 YP_004603829.1 CDS Flexsi_1611 NC_015672.1 1730894 1731559 D KEGG: cni:Calni_1605 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1730894..1731559 Flexistipes sinusarabici DSM 4947 10815922 YP_004603830.1 CDS Flexsi_1612 NC_015672.1 1731549 1732463 D KEGG: cni:Calni_1604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1731549..1732463 Flexistipes sinusarabici DSM 4947 10815923 YP_004603831.1 CDS Flexsi_1613 NC_015672.1 1732447 1733964 D InterPro IPR018973; KEGG: dat:HRM2_14650 Dbp; PFAM: Protein of unknown function DUF1998; SPTR: Dbp; hypothetical protein 1732447..1733964 Flexistipes sinusarabici DSM 4947 10815924 YP_004603832.1 CDS Flexsi_1614 NC_015672.1 1736263 1736760 R PFAM: Domain of unknown function (DUF1998); manually curated; hypothetical protein complement(1736263..1736760) Flexistipes sinusarabici DSM 4947 10815925 YP_004603833.1 CDS Flexsi_1616 NC_015672.1 1738280 1738426 D InterPro IPR002104; KEGG: dap:Dacet_1090 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase family protein; hypothetical protein 1738280..1738426 Flexistipes sinusarabici DSM 4947 10815927 YP_004603834.1 CDS Flexsi_1617 NC_015672.1 1738505 1739554 D PFAM: Domain of unknown function (DUF3596); Phage integrase family; integrase family protein 1738505..1739554 Flexistipes sinusarabici DSM 4947 10815928 YP_004603835.1 CDS Flexsi_1618 NC_015672.1 1740092 1740520 D PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 1740092..1740520 Flexistipes sinusarabici DSM 4947 10815930 YP_004603836.1 CDS Flexsi_1619 NC_015672.1 1741079 1741774 D COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_4290 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1741079..1741774 Flexistipes sinusarabici DSM 4947 10815932 YP_004603837.1 CDS Flexsi_1620 NC_015672.1 1741806 1742840 R PFAM: Transposase DDE domain; KEGG: dal:Dalk_2552 transposase IS4 family protein; SPTR: Transposase IS4 family protein; transposase IS4 family protein complement(1741806..1742840) Flexistipes sinusarabici DSM 4947 10815933 YP_004603838.1 CDS Flexsi_1621 NC_015672.1 1742837 1743640 R InterPro IPR007712:IPR012753; KEGG: ana:asl4561 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module toxin, RelE/StbE; transposase IS4 family protein complement(1742837..1743640) Flexistipes sinusarabici DSM 4947 10815934 YP_004603839.1 CDS Flexsi_1622 NC_015672.1 1744577 1744837 R PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin complement(1744577..1744837) Flexistipes sinusarabici DSM 4947 10815935 YP_004603840.1 CDS Flexsi_1623 NC_015672.1 1744830 1745030 R COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: ppd:Ppro_1126 phage integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Phage integrase family protein; hypothetical protein complement(1744830..1745030) Flexistipes sinusarabici DSM 4947 10815936 YP_004603841.1 CDS Flexsi_1624 NC_015672.1 1745167 1746318 R PFAM: Phage integrase family; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: cni:Calni_0772 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; integrase family protein complement(1745167..1746318) Flexistipes sinusarabici DSM 4947 10815937 YP_004603842.1 CDS Flexsi_1625 NC_015672.1 1746600 1747556 D PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR020598:IPR001737:IPR011530; KEGG: cni:Calni_0771 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: Ribosomal RNA adenine dimethylase; 4-hydroxythreonine-4-phosphate dehydrogenase 1746600..1747556 Flexistipes sinusarabici DSM 4947 10815938 YP_004603843.1 CDS Flexsi_1626 NC_015672.1 1747531 1748337 D PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055:IPR013520:IPR006054; KEGG: ddf:DEFDS_1873 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; ribosomal RNA small subunit methyltransferase A 1747531..1748337 Flexistipes sinusarabici DSM 4947 10815939 YP_004603844.1 CDS Flexsi_1627 NC_015672.1 1748318 1748965 D PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG4147 symporter; InterPro IPR001734:IPR019900; KEGG: afw:Anae109_3836 SSS family solute/sodium (Na+) symporter; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; DNA polymerase III subunit epsilon 1748318..1748965 Flexistipes sinusarabici DSM 4947 10815940 YP_004603845.1 CDS Flexsi_1628 NC_015672.1 1748996 1750546 R PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG3162 membrane protein; InterPro IPR007436; KEGG: dap:Dacet_1118 hypothetical protein; PFAM: Protein of unknown function DUF485; SPTR: Putative uncharacterized protein; sodium solute transporter superfamily protein complement(1748996..1750546) Flexistipes sinusarabici DSM 4947 10815941 YP_004603846.1 CDS Flexsi_1629 NC_015672.1 1750561 1750854 R PFAM: Protein of unknown function, DUF485; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: cni:Calni_0767 cbs domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cyclic nucleotide-binding; Cystathionine beta-synthase, core; SPTR: Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; hypothetical protein complement(1750561..1750854) Flexistipes sinusarabici DSM 4947 10815942 YP_004603847.1 CDS Flexsi_1630 NC_015672.1 1751272 1753161 D PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; KEGG: dap:Dacet_0906 hypothetical protein; SPTR: Putative uncharacterized protein; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 1751272..1753161 Flexistipes sinusarabici DSM 4947 10815943 YP_004603848.1 CDS Flexsi_1631 NC_015672.1 1753303 1753605 R KEGG: ddf:DEFDS_2030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1753303..1753605) Flexistipes sinusarabici DSM 4947 10815944 YP_004603849.1 CDS Flexsi_1632 NC_015672.1 1753697 1754329 R COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: cni:Calni_1857 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00730; hypothetical protein complement(1753697..1754329) Flexistipes sinusarabici DSM 4947 10815945 YP_004603850.1 CDS Flexsi_1633 NC_015672.1 1754335 1755003 R PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR003661:IPR003594:IPR003660:IPR 013767:IPR013656; KEGG: gur:Gura_2743 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; HAMP linker domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; hypothetical protein complement(1754335..1755003) Flexistipes sinusarabici DSM 4947 10815946 YP_004603851.1 CDS Flexsi_1634 NC_015672.1 1755550 1758414 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: cni:Calni_0192 hypothetical protein; PFAM: ABC transporter substrate binding protein; SPTR: Putative uncharacterized protein; multi-sensor signal transduction histidine kinase complement(1755550..1758414) Flexistipes sinusarabici DSM 4947 10815947 YP_004603852.1 CDS Flexsi_1635 NC_015672.1 1758407 1759396 R PFAM: ABC transporter substrate binding protein; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: dde:Dde_3036 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SPTR: CBS protein; ABC transporter substrate binding protein complement(1758407..1759396) Flexistipes sinusarabici DSM 4947 10815948 YP_004603853.1 CDS Flexsi_1636 NC_015672.1 1759941 1761359 D PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: gbm:Gbem_0270 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; hypothetical protein 1759941..1761359 Flexistipes sinusarabici DSM 4947 10815949 YP_004603854.1 CDS Flexsi_1637 NC_015672.1 1761557 1762696 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3152 membrane protein; InterPro IPR008523; KEGG: cpb:Cphamn1_0612 protein of unknown function DUF805; PFAM: Protein of unknown function DUF805; SPTR: Putative uncharacterized protein; diguanylate cyclase 1761557..1762696 Flexistipes sinusarabici DSM 4947 10815950 YP_004603855.1 CDS Flexsi_1638 NC_015672.1 1762730 1763107 D PFAM: Protein of unknown function (DUF805); COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: dap:Dacet_0983 dienelactone hydrolase; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase; hypothetical protein 1762730..1763107 Flexistipes sinusarabici DSM 4947 10815951 YP_004603856.1 CDS Flexsi_1639 NC_015672.1 1763104 1763844 R PFAM: Dienelactone hydrolase family; dienelactone hydrolase complement(1763104..1763844) Flexistipes sinusarabici DSM 4947 10815952 YP_004603857.1 CDS Flexsi_1640 NC_015672.1 1764340 1765404 R PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase complement(1764340..1765404) Flexistipes sinusarabici DSM 4947 10815955 YP_004603858.1 CDS Flexsi_1641 NC_015672.1 1765765 1766613 D PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0264 Translation elongation factor Ts; HAMAP: Elongation factor Ts; InterPro IPR000449:IPR014039:IPR001816; KEGG: ddf:DEFDS_0050 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; 30S ribosomal protein S2 1765765..1766613 Flexistipes sinusarabici DSM 4947 10815957 YP_004603859.1 CDS Flexsi_1642 NC_015672.1 1766613 1767269 D PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: ddf:DEFDS_0078 sucrose phosphorylase; PFAM: Glycosyl hydrolase, family 13, catalytic region; PRIAM: Sucrose phosphorylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Sucrose phosphorylase; elongation factor Ts 1766613..1767269 Flexistipes sinusarabici DSM 4947 10815958 YP_004603860.1 CDS Flexsi_1643 NC_015672.1 1767329 1769179 R PFAM: Alpha amylase, catalytic domain; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: cni:Calni_0188 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; sucrose phosphorylase complement(1767329..1769179) Flexistipes sinusarabici DSM 4947 10815959 YP_004603861.1 CDS Flexsi_1644 NC_015672.1 1769185 1769532 R PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma-factor antagonist complement(1769185..1769532) Flexistipes sinusarabici DSM 4947 10815960 YP_004603862.1 CDS Flexsi_1645 NC_015672.1 1770393 1771817 R PFAM: 2-nitropropane dioxygenase; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254:IPR011782; KEGG: ddf:DEFDS_1060 peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Peptidase S1C, Do; TIGRFAM: Peptidase S1C, Do; 2-nitropropane dioxygenase complement(1770393..1771817) Flexistipes sinusarabici DSM 4947 10815962 YP_004603863.1 CDS Flexsi_1646 NC_015672.1 1771987 1773375 R PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; KEGG: cni:Calni_0954 sigma e regulatory protein, MucB/rseb; SPTR: Putative sigma E regulatory protein, MucB/RseB; protease Do complement(1771987..1773375) Flexistipes sinusarabici DSM 4947 10815963 YP_004603864.1 CDS Flexsi_1647 NC_015672.1 1773359 1774087 R KEGG: dap:Dacet_1972 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor; sigma e regulatory protein, MucB/rseb complement(1773359..1774087) Flexistipes sinusarabici DSM 4947 10815964 YP_004603865.1 CDS Flexsi_1648 NC_015672.1 1774084 1774539 R COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: ddf:DEFDS_1057 DNA-directed RNA polymerase sigma 70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; putative transmembrane anti-sigma factor complement(1774084..1774539) Flexistipes sinusarabici DSM 4947 10815965 YP_004603866.1 CDS Flexsi_1649 NC_015672.1 1774517 1775107 R PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; ECF subfamily RNA polymerase sigma-24 subunit complement(1774517..1775107) Flexistipes sinusarabici DSM 4947 10815966 YP_004603867.1 CDS Flexsi_1650 NC_015672.1 1775208 1776527 R PFAM: Transposase DDE domain; InterPro IPR003251; KEGG: ddf:DEFDS_0850 hypothetical protein; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(1775208..1776527) Flexistipes sinusarabici DSM 4947 10815967 YP_004603868.1 CDS Flexsi_1651 NC_015672.1 1776661 1776900 R PFAM: Rubrerythrin; manually curated; rubrerythrin complement(1776661..1776900) Flexistipes sinusarabici DSM 4947 10815968 YP_004603869.1 CDS Flexsi_1653 NC_015672.1 1777876 1778421 D PFAM: Cupin domain; Helix-turn-helix; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: sta:STHERM_c04700 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; cupin 1777876..1778421 Flexistipes sinusarabici DSM 4947 10815970 YP_004603870.1 CDS Flexsi_1654 NC_015672.1 1778622 1778783 D PFAM: Rubredoxin; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: ddf:DEFDS_0572 rubredoxin-oxygen oxidoreductase; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Rubredoxin-oxygen oxidoreductase; rubredoxin-type Fe(Cys)4 protein 1778622..1778783 Flexistipes sinusarabici DSM 4947 10815971 YP_004603871.1 CDS Flexsi_1655 NC_015672.1 1778837 1780039 D PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: ddf:DEFDS_0571 K+ transport (Trk) system NAD-binding component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: K+ transport (Trk) system, NAD-binding component; flavodoxin/nitric oxide synthase 1778837..1780039 Flexistipes sinusarabici DSM 4947 10815972 YP_004603872.1 CDS Flexsi_1656 NC_015672.1 1780075 1780725 R PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ddf:DEFDS_0570 K+ transport (Trk) system membrane component; PFAM: Cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: K+ transport (Trk) system, membrane component; TrkA-N domain-containing protein complement(1780075..1780725) Flexistipes sinusarabici DSM 4947 10815973 YP_004603873.1 CDS Flexsi_1657 NC_015672.1 1780729 1782015 R PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; InterPro IPR004039; KEGG: dal:Dalk_5026 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Putative uncharacterized protein; H(+)-transporting two-sector ATPase complement(1780729..1782015) Flexistipes sinusarabici DSM 4947 10815974 YP_004603874.1 CDS Flexsi_1658 NC_015672.1 1782060 1782170 R PFAM: Rubredoxin; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ddf:DEFDS_1556 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Nitrogen-fixing NifU domain protein; rubredoxin-type Fe(Cys)4 protein complement(1782060..1782170) Flexistipes sinusarabici DSM 4947 10815975 YP_004603875.1 CDS Flexsi_1659 NC_015672.1 1782180 1782401 R PFAM: NifU-like domain; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871:IPR017787; KEGG: cni:Calni_1679 fes cluster assembly scaffold protein NifU; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SPTR: FeS cluster assembly scaffold protein NifU; TIGRFAM: NIF system FeS cluster assembly, NifU-like; nitrogen-fixing NifU domain-containing protein complement(1782180..1782401) Flexistipes sinusarabici DSM 4947 10815976 YP_004603876.1 CDS Flexsi_1660 NC_015672.1 1782408 1782857 R PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ddf:DEFDS_1558 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; FeS cluster assembly scaffold protein NifU complement(1782408..1782857) Flexistipes sinusarabici DSM 4947 10815977 YP_004603877.1 CDS Flexsi_1661 NC_015672.1 1782870 1784051 R PFAM: Aminotransferase class-V; KEGG: dap:Dacet_1242 hypothetical protein; SPTR: Putative uncharacterized protein; cysteine desulfurase complement(1782870..1784051) Flexistipes sinusarabici DSM 4947 10815978 YP_004603878.1 CDS Flexsi_1662 NC_015672.1 1784069 1784851 R COGs: COG1426 conserved hypothetical protein; InterPro IPR001387; KEGG: ddf:DEFDS_1560 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; hypothetical protein complement(1784069..1784851) Flexistipes sinusarabici DSM 4947 10815979 YP_004603879.1 CDS Flexsi_1663 NC_015672.1 1784922 1785854 R PFAM: Helix-turn-helix; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013105:IPR001440; KEGG: ddf:DEFDS_1561 hypothetical protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; XRE family transcriptional regulator complement(1784922..1785854) Flexistipes sinusarabici DSM 4947 10815980 YP_004603880.1 CDS Flexsi_1664 NC_015672.1 1785847 1786593 R PFAM: Tetratricopeptide repeat; COGs: COG1521 Putative transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: cni:Calni_1675 pantothenate kinase; PFAM: Bordetella pertussis Bvg accessory factor; PRIAM: Pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Bordetella pertussis Bvg accessory factor; hypothetical protein complement(1785847..1786593) Flexistipes sinusarabici DSM 4947 10815981 YP_004603881.1 CDS Flexsi_1665 NC_015672.1 1786574 1787350 R PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143:IPR003142:IPR004408; KEGG: dap:Dacet_1239 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal; SPTR: Biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; putative Baf family transcriptional acitvator complement(1786574..1787350) Flexistipes sinusarabici DSM 4947 10815982 YP_004603882.1 CDS Flexsi_1666 NC_015672.1 1787334 1788095 R PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_1673 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; biotin--acetyl-CoA-carboxylase ligase complement(1787334..1788095) Flexistipes sinusarabici DSM 4947 10815983 YP_004603883.1 CDS Flexsi_1667 NC_015672.1 1788088 1788435 R PFAM: Response regulator receiver domain; manually curated; response regulator receiver protein complement(1788088..1788435) Flexistipes sinusarabici DSM 4947 10815984 YP_004603884.1 CDS Flexsi_1669 NC_015672.1 1788713 1788832 D PFAM: Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: ddf:DEFDS_1661 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein DEFDS_1661; TIGRFAM: Protein of unknown function DUF28; desulfoferrodoxin Dfx domain-containing protein 1788713..1788832 Flexistipes sinusarabici DSM 4947 10815986 YP_004603885.1 CDS Flexsi_1670 NC_015672.1 1788982 1789725 D PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: dap:Dacet_0474 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; hypothetical protein 1788982..1789725 Flexistipes sinusarabici DSM 4947 10815987 YP_004603886.1 CDS Flexsi_1671 NC_015672.1 1789728 1790219 D PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; InterPro IPR013849:IPR000445:IPR011114:IPR000085; KEGG: dap:Dacet_0475 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; Helix-hairpin-helix motif; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; Crossover junction endodeoxyribonuclease ruvC 1789728..1790219 Flexistipes sinusarabici DSM 4947 10815988 YP_004603887.1 CDS Flexsi_1672 NC_015672.1 1790209 1790781 D PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0602 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; Holliday junction ATP-dependent DNA helicase ruvA 1790209..1790781 Flexistipes sinusarabici DSM 4947 10815989 YP_004603888.1 CDS Flexsi_1673 NC_015672.1 1790848 1791909 R PFAM: Glycosyl transferases group 1; COGs: COG0206 Cell division GTPase; InterPro IPR003008:IPR018316:IPR000158; KEGG: ddf:DEFDS_0601 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; group 1 glycosyl transferase complement(1790848..1791909) Flexistipes sinusarabici DSM 4947 10815990 YP_004603889.1 CDS Flexsi_1674 NC_015672.1 1791918 1793051 R PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: ddf:DEFDS_0600 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; cell division protein FtsZ complement(1791918..1793051) Flexistipes sinusarabici DSM 4947 10815991 YP_004603890.1 CDS Flexsi_1675 NC_015672.1 1793072 1794304 R PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; InterPro IPR013685; KEGG: dap:Dacet_2198 hypothetical protein; PFAM: Polypeptide-transport-associated, FtsQ-type; SPTR: Putative uncharacterized protein; cell division protein FtsA complement(1793072..1794304) Flexistipes sinusarabici DSM 4947 10815992 YP_004603891.1 CDS Flexsi_1676 NC_015672.1 1794291 1794974 R PFAM: POTRA domain, FtsQ-type; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127:IPR011095:IPR005905; KEGG: cni:Calni_1723 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; polypeptide-transport-associated domain-containing protein complement(1794291..1794974) Flexistipes sinusarabici DSM 4947 10815993 YP_004603892.1 CDS Flexsi_1677 NC_015672.1 1794967 1795872 R PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713:IPR013221:IPR004101:IPR005758; KEGG: cni:Calni_1724 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; D-alanine--D-alanine ligase complement(1794967..1795872) Flexistipes sinusarabici DSM 4947 10815994 YP_004603893.1 CDS Flexsi_1678 NC_015672.1 1795869 1797245 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; InterPro IPR004276:IPR007235; KEGG: ddf:DEFDS_0596 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; UDP-N-acetylmuramate--L-alanine ligase complement(1795869..1797245) Flexistipes sinusarabici DSM 4947 10815995 YP_004603894.1 CDS Flexsi_1679 NC_015672.1 1797245 1798288 R PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: cni:Calni_1726 cell division protein FtsW; PFAM: Cell cycle protein; SPTR: Cell division protein FtsW; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase complement(1797245..1798288) Flexistipes sinusarabici DSM 4947 10815996 YP_004603895.1 CDS Flexsi_1680 NC_015672.1 1798285 1799364 R PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR005762; KEGG: cni:Calni_1727 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; cell cycle protein complement(1798285..1799364) Flexistipes sinusarabici DSM 4947 10815997 YP_004603896.1 CDS Flexsi_1681 NC_015672.1 1799357 1800625 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR018480:IPR018481:IPR003524; KEGG: ddf:DEFDS_0593 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; UDP-N-acetylmuramoylalanine--D-glutamate ligase complement(1799357..1800625) Flexistipes sinusarabici DSM 4947 10815998 YP_004603897.1 CDS Flexsi_1682 NC_015672.1 1800630 1801715 R PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713:IPR013221:IPR005863; KEGG: cni:Calni_1729 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diam inopimelate/D-alanyl-D-alanylligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; phospho-N-acetylmuramoyl-pentapeptide- transferase complement(1800630..1801715) Flexistipes sinusarabici DSM 4947 10815999 YP_004603898.1 CDS Flexsi_1683 NC_015672.1 1801705 1803099 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR000713:IPR013221:IPR004101:IPR005761; KEGG: cni:Calni_1730 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase complement(1801705..1803099) Flexistipes sinusarabici DSM 4947 10816000 YP_004603899.1 CDS Flexsi_1684 NC_015672.1 1803086 1804537 R PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: cni:Calni_1731 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase complement(1803086..1804537) Flexistipes sinusarabici DSM 4947 10816001 YP_004603900.1 CDS Flexsi_1685 NC_015672.1 1804515 1806212 R PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; KEGG: ddf:DEFDS_0589 hypothetical protein; SPTR: Putative uncharacterized protein; peptidoglycan glycosyltransferase complement(1804515..1806212) Flexistipes sinusarabici DSM 4947 10816002 YP_004603901.1 CDS Flexsi_1686 NC_015672.1 1806202 1806498 R COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: ddf:DEFDS_0588 S-adenosyl-methyltransferase; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; hypothetical protein complement(1806202..1806498) Flexistipes sinusarabici DSM 4947 10816003 YP_004603902.1 CDS Flexsi_1687 NC_015672.1 1806495 1807421 R PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR020603:IPR003444; KEGG: cni:Calni_1734 mraz protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; ribosomal RNA small subunit methyltransferase H complement(1806495..1807421) Flexistipes sinusarabici DSM 4947 10816004 YP_004603903.1 CDS Flexsi_1688 NC_015672.1 1807433 1807912 R PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); HAMAP: ATPase, F1 complex, delta/epsilon subunit; InterPro IPR020546:IPR020547:IPR001469; KEGG: ddf:DEFDS_1885 F0F1-type ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; SPTR: ATP synthase epsilon chain; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; protein mraZ complement(1807433..1807912) Flexistipes sinusarabici DSM 4947 10816005 YP_004603904.1 CDS Flexsi_1689 NC_015672.1 1808211 1808624 R PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); COGs: COG0055 F0F1-type ATP synthase beta subunit; HAMAP: ATPase, F1 complex, beta subunit; InterProIPR003593:IPR004100:IPR000194:IPR000793:IPR 005722; KEGG: ddf:DEFDS_1886 F0F1-type ATP synthase subunit beta; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase subunit beta; TIGRFAM: ATPase, F1 complex, beta subunit; ATP synthase subunit epsilon complement(1808211..1808624) Flexistipes sinusarabici DSM 4947 10816006 YP_004603905.1 CDS Flexsi_1690 NC_015672.1 1808627 1810033 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATP synthase gamma chain; InterPro IPR000131; KEGG: ddf:DEFDS_1887 F0F1-type ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit beta complement(1808627..1810033) Flexistipes sinusarabici DSM 4947 10816007 YP_004603906.1 CDS Flexsi_1691 NC_015672.1 1810058 1810921 R PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR004100:IPR000194:IPR000793:IPR005294; KEGG: cni:Calni_1589 ATP synthase f1 subcomplex alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; ATP synthase subunit gamma complement(1810058..1810921) Flexistipes sinusarabici DSM 4947 10816008 YP_004603907.1 CDS Flexsi_1692 NC_015672.1 1810937 1812445 R PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: ddf:DEFDS_1889 F0F1-type ATP synthase subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit delta; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit alpha complement(1810937..1812445) Flexistipes sinusarabici DSM 4947 10816009 YP_004603908.1 CDS Flexsi_1693 NC_015672.1 1812473 1813012 R PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATP synthase subunit b; InterPro IPR002146:IPR005864; KEGG: cni:Calni_1591 h+transporting two-sector atpase B/b' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: H+transporting two-sector ATPase B/B' subunit; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; ATP synthase subunit delta complement(1812473..1813012) Flexistipes sinusarabici DSM 4947 10816010 YP_004603909.1 CDS Flexsi_1694 NC_015672.1 1813009 1813569 R PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; HAMAP: ATP synthase subunit b; InterPro IPR002146; KEGG: ddf:DEFDS_1891 F0F1-type ATP synthase B' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: F0F1-type ATP synthase, B' subunit; ATP synthase subunit b complement(1813009..1813569) Flexistipes sinusarabici DSM 4947 10816011 YP_004603910.1 CDS Flexsi_1695 NC_015672.1 1813583 1814008 R PFAM: ATP synthase B/B' CF(0); COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: gme:Gmet_2645 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; ATP synthase subunit b complement(1813583..1814008) Flexistipes sinusarabici DSM 4947 10816012 YP_004603911.1 CDS Flexsi_1696 NC_015672.1 1814779 1815375 D PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family; KEGG: gur:Gura_3349 hypothetical protein; SPTR: Putative uncharacterized protein; TetR family transcriptional regulator 1814779..1815375 Flexistipes sinusarabici DSM 4947 10816013 YP_004603912.1 CDS Flexsi_1697 NC_015672.1 1815502 1815975 D manually curated; hypothetical protein 1815502..1815975 Flexistipes sinusarabici DSM 4947 10816014 YP_004603913.1 CDS Flexsi_1699 NC_015672.1 1816505 1817776 R PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; diguanylate cyclase/phosphodiesterase complement(1816505..1817776) Flexistipes sinusarabici DSM 4947 10816016 YP_004603914.1 CDS Flexsi_1700 NC_015672.1 1817865 1819091 R InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; transposase IS4 family protein complement(1817865..1819091) Flexistipes sinusarabici DSM 4947 10816017 YP_004603915.1 CDS Flexsi_1701 NC_015672.1 1819194 1820513 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; transposase IS4 family protein 1819194..1820513 Flexistipes sinusarabici DSM 4947 10816018 YP_004603916.1 CDS Flexsi_1702 NC_015672.1 1821025 1822392 R PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(1821025..1822392) Flexistipes sinusarabici DSM 4947 10816019 YP_004603917.1 CDS Flexsi_1705 NC_015672.1 1823088 1823774 R PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; IstB domain-containing protein ATP-binding protein complement(1823088..1823774) Flexistipes sinusarabici DSM 4947 10816022 YP_004603918.1 CDS Flexsi_1706 NC_015672.1 1823761 1825284 R PFAM: Integrase core domain; InterPro IPR004370; KEGG: ddf:DEFDS_1325 4-oxalocrotonate tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: 4-oxalocrotonate tautomerase; integrase catalytic subunit complement(1823761..1825284) Flexistipes sinusarabici DSM 4947 10816023 YP_004603919.1 CDS Flexsi_1707 NC_015672.1 1825569 1825757 R PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: ddf:DEFDS_0819 membrane-bound lytic murein transglycosylase B; SPTR: Membrane-bound lytic murein transglycosylase B; 4-oxalocrotonate tautomerase complement(1825569..1825757) Flexistipes sinusarabici DSM 4947 10816024 YP_004603920.1 CDS Flexsi_1708 NC_015672.1 1825783 1826682 R TIGRFAM: lytic murein transglycosylase B; InterPro IPR004096; KEGG: dat:HRM2_39440 hypothetical protein; PFAM: 4-vinyl reductase, 4VR; SPTR: Putative uncharacterized protein; membrane-bound lytic murein transglycosylase B complement(1825783..1826682) Flexistipes sinusarabici DSM 4947 10816025 YP_004603921.1 CDS Flexsi_1709 NC_015672.1 1826847 1827365 D PFAM: V4R domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dds:Ddes_0422 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; 4-vinyl reductase 4VR 1826847..1827365 Flexistipes sinusarabici DSM 4947 10816026 YP_004603922.1 CDS Flexsi_1710 NC_015672.1 1827368 1828015 D PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; diguanylate cyclase 1827368..1828015 Flexistipes sinusarabici DSM 4947 10816027 YP_004603923.1 CDS Flexsi_1711 NC_015672.1 1828188 1829237 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(1828188..1829237) Flexistipes sinusarabici DSM 4947 10816028 YP_004603924.1 CDS Flexsi_1713 NC_015672.1 1829762 1830670 R PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; COGs: COG1692 conserved hypothetical protein; InterPro IPR004843; KEGG: ddf:DEFDS_0482 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Putative uncharacterized protein; quinolinate synthase A complement(1829762..1830670) Flexistipes sinusarabici DSM 4947 10816030 YP_004603925.1 CDS Flexsi_1714 NC_015672.1 1830672 1831469 R TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR004087:IPR003607:IPR018111:IPR006674:IPR 017705:IPR006675; KEGG: ddf:DEFDS_0481 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD region; K Homology; SPTR: Putative uncharacterized protein; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG; metallophosphoesterase complement(1830672..1831469) Flexistipes sinusarabici DSM 4947 10816031 YP_004603926.1 CDS Flexsi_1715 NC_015672.1 1831459 1833018 R PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: ddf:DEFDS_0480 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 2,3 cyclic-nucleotide 2-phosphodiesterase complement(1831459..1833018) Flexistipes sinusarabici DSM 4947 10816032 YP_004603927.1 CDS Flexsi_1716 NC_015672.1 1833018 1833569 R PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: cni:Calni_0332 aaa atpase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase central domain protein; 5-formyltetrahydrofolate cyclo-ligase complement(1833018..1833569) Flexistipes sinusarabici DSM 4947 10816033 YP_004603928.1 CDS Flexsi_1717 NC_015672.1 1833559 1834785 R PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); 6S / SsrS RNA as predicted by Rfam (RF00013), score 108.25; AAA ATPase complement(1833559..1834785) Flexistipes sinusarabici DSM 4947 10816034 YP_004603929.1 CDS Flexsi_1718 NC_015672.1 1834985 1835260 R PFAM: Cell division protein ZapA; KEGG: dap:Dacet_1925 hypothetical protein; hypothetical protein complement(1834985..1835260) Flexistipes sinusarabici DSM 4947 10816036 YP_004603930.1 CDS Flexsi_1719 NC_015672.1 1835273 1835485 R PFAM: Protein of unknown function (DUF904); COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR002547:IPR005146:IPR005147:IPR005121:IPR 004532; KEGG: ddf:DEFDS_1621 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding region; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; hypothetical protein complement(1835273..1835485) Flexistipes sinusarabici DSM 4947 10816037 YP_004603931.1 CDS Flexsi_1720 NC_015672.1 1835757 1838138 R PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; InterPro IPR004188:IPR002319:IPR004529; KEGG: ddf:DEFDS_1622 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; phenylalanyl-tRNA synthetase subunit beta complement(1835757..1838138) Flexistipes sinusarabici DSM 4947 10816038 YP_004603932.1 CDS Flexsi_1721 NC_015672.1 1838148 1839161 R PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: ddf:DEFDS_1501 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; phenylalanyl-tRNA synthetase subunit alpha complement(1838148..1839161) Flexistipes sinusarabici DSM 4947 10816039 YP_004603933.1 CDS Flexsi_1722 NC_015672.1 1839266 1839613 R PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; HAMAP: Ribosomal protein L35; InterPro IPR001706; KEGG: ddf:DEFDS_1502 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; 50S ribosomal protein L20 complement(1839266..1839613) Flexistipes sinusarabici DSM 4947 10816040 YP_004603934.1 CDS Flexsi_1723 NC_015672.1 1839630 1839827 R PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; COGs: COG0290 Translation initiation factor 3 (IF-3); HAMAP: Translation initiation factor IF-3; InterPro IPR019814:IPR019815:IPR001288; KEGG: cni:Calni_1323 bacterial translation initiation factor 3 (bif-3); PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; manually curated; 50S ribosomal protein L35 complement(1839630..1839827) Flexistipes sinusarabici DSM 4947 10816041 YP_004603935.1 CDS Flexsi_1724 NC_015672.1 1839841 1840371 R PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR004095:IPR012947:IPR002314:IPR004154:IPR 002320; KEGG: ddf:DEFDS_1504 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; translation initiation factor IF-3 complement(1839841..1840371) Flexistipes sinusarabici DSM 4947 10816042 YP_004603936.1 CDS Flexsi_1725 NC_015672.1 1840375 1842297 R PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; This gene is disrupted by insertion of repetitive element; manually curated; threonyl-tRNA synthetase complement(1840375..1842297) Flexistipes sinusarabici DSM 4947 10816043 YP_004603937.1 CDS Flexsi_1727 NC_015672.1 1842899 1844083 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS116/IS110/IS902 family protein complement(1842899..1844083) Flexistipes sinusarabici DSM 4947 10816044 YP_004603938.1 CDS Flexsi_1728 NC_015672.1 1844478 1845527 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0566 rRNA methylase; InterPro IPR001537:IPR004441; KEGG: cni:Calni_0015 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; transposase IS4 family protein complement(1844478..1845527) Flexistipes sinusarabici DSM 4947 10816045 YP_004603939.1 CDS Flexsi_1729 NC_015672.1 1848103 1848792 R PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; InterPro IPR011642; KEGG: ddf:DEFDS_2159 hypothetical protein; PFAM: Nucleoside recognition; SPTR: Putative uncharacterized protein; TrmH family RNA methyltransferase complement(1848103..1848792) Flexistipes sinusarabici DSM 4947 10816046 YP_004603940.1 CDS Flexsi_1730 NC_015672.1 1848853 1849275 D PFAM: Nucleoside recognition; KEGG: ddf:DEFDS_2158 hypothetical protein; SPTR: Putative uncharacterized protein; nucleoside recognition domain-containing protein 1848853..1849275 Flexistipes sinusarabici DSM 4947 10816047 YP_004603941.1 CDS Flexsi_1731 NC_015672.1 1849266 1849706 D COGs: COG1373 ATPase (AAA+ superfamily); KEGG: ddf:DEFDS_0392 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1849266..1849706 Flexistipes sinusarabici DSM 4947 10816048 YP_004603942.1 CDS Flexsi_1732 NC_015672.1 1849837 1851000 R COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: dat:HRM2_48360 TolC; PFAM: Outer membrane efflux protein; SPTR: TolC; hypothetical protein complement(1849837..1851000) Flexistipes sinusarabici DSM 4947 10816049 YP_004603943.1 CDS Flexsi_1733 NC_015672.1 1851637 1852881 R PFAM: Outer membrane efflux protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: dat:HRM2_48370 NolG; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; outer membrane efflux protein complement(1851637..1852881) Flexistipes sinusarabici DSM 4947 10816050 YP_004603944.1 CDS Flexsi_1734 NC_015672.1 1853260 1856361 R PFAM: AcrB/AcrD/AcrF family; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dat:HRM2_48380 putative membrane-fusion protein; PFAM: Secretion protein HlyD; SPTR: Putative membrane-fusion protein; TIGRFAM: Secretion protein HlyD; acriflavin resistance protein complement(1853260..1856361) Flexistipes sinusarabici DSM 4947 10816051 YP_004603945.1 CDS Flexsi_1735 NC_015672.1 1856361 1857413 R PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: ant:Arnit_0841 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family protein; RND family efflux transporter MFP subunit complement(1856361..1857413) Flexistipes sinusarabici DSM 4947 10816052 YP_004603946.1 CDS Flexsi_1736 NC_015672.1 1857397 1857858 R PFAM: MarR family; KEGG: ddf:DEFDS_1152 hypothetical protein; SPTR: Putative uncharacterized protein; MarR family transcriptional regulator complement(1857397..1857858) Flexistipes sinusarabici DSM 4947 10816053 YP_004603947.1 CDS Flexsi_1737 NC_015672.1 1858042 1860525 D InterPro IPR008815:IPR012902; KEGG: nam:NAMH_1676 S23 ribosomal; PFAM: 23S rRNA-associated protein; Prepilin-type cleavage/methylation, N-terminal; SPTR: S23 ribosomal; hypothetical protein 1858042..1860525 Flexistipes sinusarabici DSM 4947 10816054 YP_004603948.1 CDS Flexsi_1738 NC_015672.1 1860788 1861624 D PFAM: S23 ribosomal protein; InterPro IPR012902; KEGG: cni:Calni_0394 hypothetical protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 1860788..1861624 Flexistipes sinusarabici DSM 4947 10816055 YP_004603949.1 CDS Flexsi_1739 NC_015672.1 1861617 1862144 D TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR008815; KEGG: dba:Dbac_2569 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; hypothetical protein 1861617..1862144 Flexistipes sinusarabici DSM 4947 10816056 YP_004603950.1 CDS Flexsi_1740 NC_015672.1 1862533 1862895 D PFAM: S23 ribosomal protein; InterPro IPR012902; KEGG: cni:Calni_0395 hypothetical protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 1862533..1862895 Flexistipes sinusarabici DSM 4947 10816057 YP_004603951.1 CDS Flexsi_1741 NC_015672.1 1862880 1863752 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; KEGG: cni:Calni_0396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1862880..1863752 Flexistipes sinusarabici DSM 4947 10816058 YP_004603952.1 CDS Flexsi_1742 NC_015672.1 1863749 1864135 D InterPro IPR002559; KEGG: glo:Glov_3666 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 1863749..1864135 Flexistipes sinusarabici DSM 4947 10816059 YP_004603953.1 CDS Flexsi_1743 NC_015672.1 1864252 1865619 R PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(1864252..1865619) Flexistipes sinusarabici DSM 4947 10816060 YP_004603954.1 CDS Flexsi_1745 NC_015672.1 1866327 1867694 D PFAM: Transposase domain (DUF772); KEGG: dae:Dtox_1626 transposase IS4 family protein; SPTR: Transposase IS4 family protein; transposase IS4 family protein 1866327..1867694 Flexistipes sinusarabici DSM 4947 10816062 YP_004603955.1 CDS Flexsi_1746 NC_015672.1 1868065 1868556 D manually curated; transposase IS4 family protein 1868065..1868556 Flexistipes sinusarabici DSM 4947 10816063 YP_004603956.1 CDS Flexsi_1748 NC_015672.1 1869483 1870727 R PFAM: Integrase core domain; InterPro IPR002525; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS111A/IS1328/IS1533; SPTR: Transposase IS116/IS110/IS902 family protein; integrase catalytic subunit complement(1869483..1870727) Flexistipes sinusarabici DSM 4947 10816065 YP_004603957.1 CDS Flexsi_1749 NC_015672.1 1870812 1871513 R PFAM: Transposase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mmq:MmarC5_1142 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase; transposase IS111A/IS1328/IS1533 complement(1870812..1871513) Flexistipes sinusarabici DSM 4947 10816066 YP_004603958.1 CDS Flexsi_1750 NC_015672.1 1871950 1872531 D PFAM: NADPH-dependent FMN reductase; COGs: COG0815 Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; InterPro IPR003010:IPR004563; KEGG: ddf:DEFDS_0986 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: Apolipoprotein N-acyltransferase; NADPH-dependent FMN reductase 1871950..1872531 Flexistipes sinusarabici DSM 4947 10816067 YP_004603959.1 CDS Flexsi_1751 NC_015672.1 1872741 1874216 D PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR003369:IPR006312; KEGG: ddf:DEFDS_0987 twin-arginine translocation protein, TatA/E family; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog 1; TIGRFAM: Twin-arginine translocation protein TatA/E; apolipoprotein N-acyltransferase 1872741..1874216 Flexistipes sinusarabici DSM 4947 10816068 YP_004603960.1 CDS Flexsi_1752 NC_015672.1 1874298 1874522 D PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; COGs: COG4012 conserved hypothetical protein; InterPro IPR014846; KEGG: ddf:DEFDS_0988 hypothetical protein; PFAM: Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme; SPTR: Putative uncharacterized protein; Sec-independent protein translocase protein tatA/E-like protein 1874298..1874522 Flexistipes sinusarabici DSM 4947 10816069 YP_004603961.1 CDS Flexsi_1753 NC_015672.1 1874523 1875539 D PFAM: Putative pyruvate format-lyase activating enzyme (DUF1786); COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ddf:DEFDS_0989 cobalt/nickel ABC transporter permease; PFAM: Cobalt transport protein; SPTR: Cobalt/nickel ABC transporter, permease; hypothetical protein 1874523..1875539 Flexistipes sinusarabici DSM 4947 10816070 YP_004603962.1 CDS Flexsi_1754 NC_015672.1 1875593 1876342 D PFAM: Cobalt transport protein; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR020097:IPR001406; KEGG: cni:Calni_0390 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; ABC transporter 1875593..1876342 Flexistipes sinusarabici DSM 4947 10816071 YP_004603963.1 CDS Flexsi_1755 NC_015672.1 1876335 1877069 D PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; KEGG: cni:Calni_0034 hypothetical protein; tRNA pseudouridine synthase A 1876335..1877069 Flexistipes sinusarabici DSM 4947 10816072 YP_004603964.1 CDS Flexsi_1756 NC_015672.1 1877066 1877299 R KEGG: ddf:DEFDS_1354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1877066..1877299) Flexistipes sinusarabici DSM 4947 10816073 YP_004603965.1 CDS Flexsi_1757 NC_015672.1 1877877 1878725 D hypothetical protein 1877877..1878725 Flexistipes sinusarabici DSM 4947 10816074 YP_004603966.1 CDS Flexsi_1758 NC_015672.1 1878974 1879177 D COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ilo:IL0120 membrane-associated protein; PFAM: Glycosyl transferase, group 1; SPTR: Membrane-associated protein; hypothetical protein 1878974..1879177 Flexistipes sinusarabici DSM 4947 10816075 YP_004603967.1 CDS Flexsi_1759 NC_015672.1 1879179 1881425 R PFAM: Glycosyl transferases group 1; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; group 1 glycosyl transferase complement(1879179..1881425) Flexistipes sinusarabici DSM 4947 10816076 YP_004603968.1 CDS Flexsi_1760 NC_015672.1 1881563 1882612 R PFAM: Transposase DDE domain; Transposase domain (DUF772); transposase IS4 family protein complement(1881563..1882612) Flexistipes sinusarabici DSM 4947 10816077 YP_004603969.1 CDS Flexsi_1761 NC_015672.1 1882650 1882748 R InterPro IPR005242; KEGG: maq:Maqu_3008 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1882650..1882748) Flexistipes sinusarabici DSM 4947 10816078 YP_004603970.1 CDS Flexsi_1762 NC_015672.1 1882745 1883809 R PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; HAMAP: Thiazole biosynthesis; InterPro IPR008867; KEGG: cni:Calni_0489 thiazole-phosphate synthase; PFAM: Thiazole biosynthesis; SPTR: Thiazole synthase; hypothetical protein complement(1882745..1883809) Flexistipes sinusarabici DSM 4947 10816079 YP_004603971.1 CDS Flexsi_1763 NC_015672.1 1884101 1884877 D PFAM: Thiazole biosynthesis protein ThiG; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197:IPR010722:IPR012726; KEGG: cni:Calni_0488 tyrosine lyase thih; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SPTR: Tyrosine lyase ThiH; TIGRFAM: Thiazole biosynthesis ThiH; thiazole synthase 1884101..1884877 Flexistipes sinusarabici DSM 4947 10816080 YP_004603972.1 CDS Flexsi_1764 NC_015672.1 1884893 1886017 D PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792:IPR010280; KEGG: ddf:DEFDS_0222 tRNA (uracil-5-)-methyltransferase; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: tRNA (Uracil-5-)-methyltransferase; thiazole biosynthesis protein ThiH 1884893..1886017 Flexistipes sinusarabici DSM 4947 10816081 YP_004603973.1 CDS Flexsi_1765 NC_015672.1 1886014 1887210 D PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TRAM domain-containing protein 1886014..1887210 Flexistipes sinusarabici DSM 4947 10816082 YP_004603974.1 CDS Flexsi_1766 NC_015672.1 1887322 1887807 D InterPro IPR003660:IPR004010; KEGG: dat:HRM2_16030 hypothetical protein; PFAM: HAMP linker domain; Cache; SMART: HAMP linker domain; SPTR: Putative uncharacterized protein; hypothetical protein 1887322..1887807 Flexistipes sinusarabici DSM 4947 10816083 YP_004603975.1 CDS Flexsi_1767 NC_015672.1 1887809 1888903 D PFAM: HAMP domain; Cache domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: cni:Calni_1306 chromosome segregation atpase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Chromosome segregation ATPase; histidine kinase HAMP region domain-containing protein 1887809..1888903 Flexistipes sinusarabici DSM 4947 10816084 YP_004603976.1 CDS Flexsi_1768 NC_015672.1 1889100 1889861 D PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: ddf:DEFDS_0127 chromosome partitioning protein ParB; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Chromosome partitioning protein ParB; TIGRFAM: ParB-like partition protein; Cobyrinic acid ac-diamide synthase 1889100..1889861 Flexistipes sinusarabici DSM 4947 10816085 YP_004603977.1 CDS Flexsi_1769 NC_015672.1 1889858 1890706 D PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: ddf:DEFDS_0128 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: Putative uncharacterized protein; parB-like partition protein 1889858..1890706 Flexistipes sinusarabici DSM 4947 10816086 YP_004603978.1 CDS Flexsi_1770 NC_015672.1 1890703 1891086 D PFAM: Protein of unknown function, DUF583; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: cni:Calni_1303 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; hypothetical protein 1890703..1891086 Flexistipes sinusarabici DSM 4947 10816087 YP_004603979.1 CDS Flexsi_1771 NC_015672.1 1891083 1891847 D PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG1314 Preprotein translocase subunit SecG; InterPro IPR004692; KEGG: cni:Calni_0863 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; triosephosphate isomerase 1891083..1891847 Flexistipes sinusarabici DSM 4947 10816088 YP_004603980.1 CDS Flexsi_1772 NC_015672.1 1891857 1892174 D PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: ddf:DEFDS_0131 peptide/nickel ABC transporter substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Peptide/nickel ABC transporter, substrate-binding protein; preprotein translocase subunit SecG 1891857..1892174 Flexistipes sinusarabici DSM 4947 10816089 YP_004603981.1 CDS Flexsi_1773 NC_015672.1 1892177 1893841 D PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ddf:DEFDS_0132 peptide/nickel ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Peptide/nickel ABC transporter, permease; ABC transporter periplasmic protein 1892177..1893841 Flexistipes sinusarabici DSM 4947 10816090 YP_004603982.1 CDS Flexsi_1774 NC_015672.1 1893982 1894962 D PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dap:Dacet_2982 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; ABC transporter 1893982..1894962 Flexistipes sinusarabici DSM 4947 10816091 YP_004603983.1 CDS Flexsi_1775 NC_015672.1 1894949 1895788 D PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cni:Calni_0358 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; ABC transporter 1894949..1895788 Flexistipes sinusarabici DSM 4947 10816092 YP_004603984.1 CDS Flexsi_1776 NC_015672.1 1895796 1896689 R PFAM: NAD dependent epimerase/dehydratase family; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: dap:Dacet_2445 DNA repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; manually curated; NAD-dependent epimerase/dehydratase complement(1895796..1896689) Flexistipes sinusarabici DSM 4947 10816093 YP_004603985.1 CDS Flexsi_1777 NC_015672.1 1896725 1897390 R PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; manually curated; DNA repair protein RadC complement(1896725..1897390) Flexistipes sinusarabici DSM 4947 10816094 YP_004603986.1 CDS Flexsi_1779 NC_015672.1 1898949 1899566 D KEGG: kol:Kole_0062 DNA methylase N-4/N-6 domain protein; SPTR: Methyltransferase; hypothetical protein 1898949..1899566 Flexistipes sinusarabici DSM 4947 10816096 YP_004603987.1 CDS Flexsi_1780 NC_015672.1 1899667 1899885 D PFAM: Type III restriction/modification enzyme methylation subunit; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; DNA methylase N-4/N-6 domain-containing protein 1899667..1899885 Flexistipes sinusarabici DSM 4947 10816097 YP_004603988.1 CDS Flexsi_1781 NC_015672.1 1900049 1901098 R PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(1900049..1901098) Flexistipes sinusarabici DSM 4947 10816098 YP_004603989.1 CDS Flexsi_1783 NC_015672.1 1902986 1905544 D PFAM: Type III restriction enzyme, res subunit; KEGG: bhy:BHWA1_00405 type II restriction-modification enzyme; SPTR: Type II restriction-modification enzyme; type III site-specific deoxyribonuclease 1902986..1905544 Flexistipes sinusarabici DSM 4947 10816100 YP_004603990.1 CDS Flexsi_1784 NC_015672.1 1905905 1906684 D KEGG: mta:Moth_0637 hypothetical protein; SPTR: Putative uncharacterized protein; type II restriction-modification enzyme 1905905..1906684 Flexistipes sinusarabici DSM 4947 10816101 YP_004603991.1 CDS Flexsi_1785 NC_015672.1 1906611 1907282 R KEGG: shc:Shell_0165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1906611..1907282) Flexistipes sinusarabici DSM 4947 10816102 YP_004603992.1 CDS Flexsi_1786 NC_015672.1 1907462 1908667 R KEGG: sbm:Shew185_3249 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1907462..1908667) Flexistipes sinusarabici DSM 4947 10816103 YP_004603993.1 CDS Flexsi_1787 NC_015672.1 1908725 1909429 R KEGG: gvi:glr4337 hypothetical protein; SPTR: Glr4337 protein; hypothetical protein complement(1908725..1909429) Flexistipes sinusarabici DSM 4947 10816104 YP_004603994.1 CDS Flexsi_1788 NC_015672.1 1909629 1910414 R PFAM: Protein of unknwon function (DUF2893); COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: ddf:DEFDS_1268 ATP-binding protein, CobQ/CobB/MinD/ParA family; PFAM: ATPase-like, ParA/MinD; SPTR: ATP-binding protein, CobQ/CobB/MinD/ParA family; hypothetical protein complement(1909629..1910414) Flexistipes sinusarabici DSM 4947 10816105 YP_004603995.1 CDS Flexsi_1789 NC_015672.1 1910940 1911821 D PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; TIGRFAM: YgiT-type zinc finger domain; COGs: COG1038 Pyruvate carboxylase; InterProIPR005481:IPR005479:IPR005482:IPR000891:IPR 003379:IPR000089:IPR005930; KEGG: cni:Calni_0495 pyruvate carboxylase; PFAM: Conserved carboxylase region; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Biotin/lipoyl attachment; PRIAM: Pyruvate carboxylase; SPTR: Pyruvate carboxylase; TIGRFAM: Pyruvate carboxylase; ParA/MinD ATPase-like protein 1910940..1911821 Flexistipes sinusarabici DSM 4947 10816106 YP_004603996.1 CDS Flexsi_1790 NC_015672.1 1912321 1915755 D PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase; COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; HAMAP: Thiamine biosynthesis protein; InterPro IPR004114:IPR020536:IPR003720; KEGG: ddf:DEFDS_1945 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein, C-terminal; THUMP; SPTR: Probable tRNA sulfurtransferase; TIGRFAM: Thiamine biosynthesis protein; pyruvate carboxylase 1912321..1915755 Flexistipes sinusarabici DSM 4947 10816107 YP_004603997.1 CDS Flexsi_1791 NC_015672.1 1915807 1916964 R PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ddf:DEFDS_1944 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; tRNA sulfurtransferase complement(1915807..1916964) Flexistipes sinusarabici DSM 4947 10816108 YP_004603998.1 CDS Flexsi_1792 NC_015672.1 1916964 1918070 R PFAM: Aminotransferase class-V; KEGG: dap:Dacet_0519 hypothetical protein; SPTR: Putative uncharacterized protein; cysteine desulfurase complement(1916964..1918070) Flexistipes sinusarabici DSM 4947 10816109 YP_004603999.1 CDS Flexsi_1793 NC_015672.1 1918074 1918337 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006657; KEGG: ddf:DEFDS_1943 hypothetical protein; PFAM: Molydopterin dinucleotide-binding region; SPTR: Putative uncharacterized protein; hypothetical protein complement(1918074..1918337) Flexistipes sinusarabici DSM 4947 10816110 YP_004604000.1 CDS Flexsi_1794 NC_015672.1 1918330 1920003 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003593:IPR003439:IPR005670; KEGG: drt:Dret_0469 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter-like; PRIAM: Phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Phosphate ABC transporter, ATPase subunit; TIGRFAM: Phosphate transport system permease protein 1; molybdopterin dinucleotide-binding region complement(1918330..1920003) Flexistipes sinusarabici DSM 4947 10816111 YP_004604001.1 CDS Flexsi_1795 NC_015672.1 1920228 1920992 R PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: drt:Dret_0466 phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; phosphate ABC transporter ATPase complement(1920228..1920992) Flexistipes sinusarabici DSM 4947 10816112 YP_004604002.1 CDS Flexsi_1796 NC_015672.1 1921023 1922186 R PFAM: Binding-protein-dependent transport system inner membrane component; Domain of unknown function (DUF3333); TIGRFAM: phosphate ABC transporter, permease protein PstA; COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: cch:Cag_0500 phosphate ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter membrane protein 1, PhoT family; TIGRFAM: Phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease complement(1921023..1922186) Flexistipes sinusarabici DSM 4947 10816113 YP_004604003.1 CDS Flexsi_1797 NC_015672.1 1922198 1923442 R PFAM: Binding-protein-dependent transport system inner membrane component; Phosphate ATP-binding cassette transporter; TIGRFAM: phosphate ABC transporter, permease protein PstC; COGs: COG0226 ABC-type phosphate transport system periplasmic component; KEGG: drt:Dret_0464 periplasmic phosphate binding protein; SPTR: Periplasmic phosphate binding protein; phosphate ABC transporter permease complement(1922198..1923442) Flexistipes sinusarabici DSM 4947 10816114 YP_004604004.1 CDS Flexsi_1798 NC_015672.1 1923511 1924524 R COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ddf:DEFDS_1239 polar amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; phosphate binding protein complement(1923511..1924524) Flexistipes sinusarabici DSM 4947 10816115 YP_004604005.1 CDS Flexsi_1799 NC_015672.1 1924652 1925524 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR001320; KEGG: ddf:DEFDS_1238 polar amino acid ABC transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Polar amino acid ABC transporter, substrate-binding protein; polar amino acid ABC transporter inner membrane subunit complement(1924652..1925524) Flexistipes sinusarabici DSM 4947 10816116 YP_004604006.1 CDS Flexsi_1800 NC_015672.1 1925535 1926362 R PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: drt:Dret_0475 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; manually curated; ABC transporter periplasmic subunit complement(1925535..1926362) Flexistipes sinusarabici DSM 4947 10816117 YP_004604007.1 CDS Flexsi_1801 NC_015672.1 1926378 1927151 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR006094:IPR011601:IPR003170; KEGG: cni:Calni_0129 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; polar amino acid ABC transporter inner membrane subunit complement(1926378..1927151) Flexistipes sinusarabici DSM 4947 10816118 YP_004604008.1 CDS Flexsi_1802 NC_015672.1 1927306 1928166 R PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845; KEGG: dap:Dacet_0477 purine or other phosphorylase family 1; PFAM: Nucleoside phosphorylase; PRIAM: S-methyl-5'-thioadenosine phosphorylase; SPTR: Purine or other phosphorylase family 1; UDP-N-acetylenolpyruvoylglucosamine reductase complement(1927306..1928166) Flexistipes sinusarabici DSM 4947 10816119 YP_004604009.1 CDS Flexsi_1803 NC_015672.1 1928163 1928957 R PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: ddf:DEFDS_0473 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; S-methyl-5'-thioadenosine phosphorylase complement(1928163..1928957) Flexistipes sinusarabici DSM 4947 10816120 YP_004604010.1 CDS Flexsi_1804 NC_015672.1 1929286 1929945 R PFAM: UPF0126 domain; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dap:Dacet_0476 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; hypothetical protein complement(1929286..1929945) Flexistipes sinusarabici DSM 4947 10816121 YP_004604011.1 CDS Flexsi_1805 NC_015672.1 1929893 1930558 R PFAM: ABC transporter; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838:IPR011925; KEGG: ddf:DEFDS_0471 lipoprotein-releasing system permease protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Lipoprotein-releasing system permease protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; phosphonate-transporting ATPase complement(1929893..1930558) Flexistipes sinusarabici DSM 4947 10816122 YP_004604012.1 CDS Flexsi_1806 NC_015672.1 1930555 1931784 R PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase [glutamine-hydrolyzing]; InterPro IPR000991:IPR018318:IPR001674:IPR004739; KEGG: cni:Calni_0134 gmp synthase (glutamine-hydrolyzing); PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; lipoprotein releasing system transmembrane protein LolC/E family complement(1930555..1931784) Flexistipes sinusarabici DSM 4947 10816123 YP_004604013.1 CDS Flexsi_1807 NC_015672.1 1931794 1933344 R PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; Asparagine synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR000644:IPR001093:IPR005990; KEGG: ddf:DEFDS_0469 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase; GMP synthase complement(1931794..1933344) Flexistipes sinusarabici DSM 4947 10816124 YP_004604014.1 CDS Flexsi_1808 NC_015672.1 1933372 1934841 R PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0171 NAD synthase; HAMAP: NH(3)-dependent NAD(+) synthetase; InterPro IPR003694; KEGG: cni:Calni_0136 nh(3)-dependent nad(+) synthetase; PFAM: NAD+ synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthase; inosine-5'-monophosphate dehydrogenase complement(1933372..1934841) Flexistipes sinusarabici DSM 4947 10816125 YP_004604015.1 CDS Flexsi_1809 NC_015672.1 1934986 1935801 R PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ddf:DEFDS_0467 hydrolase carbon-nitrogen family; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family; NH(3)-dependent NAD(+) synthetase complement(1934986..1935801) Flexistipes sinusarabici DSM 4947 10816126 YP_004604016.1 CDS Flexsi_1810 NC_015672.1 1935809 1936639 R PFAM: Carbon-nitrogen hydrolase; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: ddf:DEFDS_0466 molybdenum cofactor biosynthesis protein C; PFAM: Molybdopterin cofactor biosynthesis MoaC region; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase complement(1935809..1936639) Flexistipes sinusarabici DSM 4947 10816127 YP_004604017.1 CDS Flexsi_1811 NC_015672.1 1936641 1937117 R PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; InterPro IPR003646:IPR013247; KEGG: ddf:DEFDS_0465 hypothetical protein; PFAM: SH3, type 3; SMART: Bacterial SH3-like region; SPTR: Putative uncharacterized protein; molybdenum cofactor biosynthesis protein C complement(1936641..1937117) Flexistipes sinusarabici DSM 4947 10816128 YP_004604018.1 CDS Flexsi_1812 NC_015672.1 1937128 1937907 R PFAM: Bacterial SH3 domain; COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013029:IPR004396; KEGG: ddf:DEFDS_0464 GTP-binding protein; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein; TIGRFAM: Conserved hypothetical protein CHP00092; SH3 type 3 domain-containing protein complement(1937128..1937907) Flexistipes sinusarabici DSM 4947 10816129 YP_004604019.1 CDS Flexsi_1813 NC_015672.1 1937900 1938991 R PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; InterPro IPR004131; KEGG: ddf:DEFDS_0463 V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Putative K(+)-stimulated pyrophosphate-energized sodium pump; TIGRFAM: Inorganic H+ pyrophosphatase; GTP-binding protein YchF complement(1937900..1938991) Flexistipes sinusarabici DSM 4947 10816130 YP_004604020.1 CDS Flexsi_1814 NC_015672.1 1939097 1941115 R PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: cni:Calni_0240 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; pyrophosphate-energized proton pump complement(1939097..1941115) Flexistipes sinusarabici DSM 4947 10816131 YP_004604021.1 CDS Flexsi_1815 NC_015672.1 1941119 1941709 R PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: ddf:DEFDS_0461 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; peptidyl-tRNA hydrolase complement(1941119..1941709) Flexistipes sinusarabici DSM 4947 10816132 YP_004604022.1 CDS Flexsi_1816 NC_015672.1 1941710 1942666 R PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR006204:IPR013750:IPR004424; KEGG: ddf:DEFDS_0460 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; ribose-phosphate pyrophosphokinase complement(1941710..1942666) Flexistipes sinusarabici DSM 4947 10816133 YP_004604023.1 CDS Flexsi_1817 NC_015672.1 1942678 1943523 R PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: dap:Dacet_0068 hypothetical protein; SPTR: Putative uncharacterized protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase complement(1942678..1943523) Flexistipes sinusarabici DSM 4947 10816134 YP_004604024.1 CDS Flexsi_1818 NC_015672.1 1943563 1944180 R InterPro IPR019734:IPR001440:IPR013105; KEGG: cni:Calni_0236 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_1 repeat-containing protein; hypothetical protein complement(1943563..1944180) Flexistipes sinusarabici DSM 4947 10816135 YP_004604025.1 CDS Flexsi_1819 NC_015672.1 1944158 1945792 R PFAM: Tetratricopeptide repeat; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481:IPR005479:IPR005482:IPR004549; KEGG: ddf:DEFDS_0457 acetyl-CoA carboxylase biotin carboxylase subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SPTR: Acetyl-CoA carboxylase, biotin carboxylase subunit; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; hypothetical protein complement(1944158..1945792) Flexistipes sinusarabici DSM 4947 10816136 YP_004604026.1 CDS Flexsi_1820 NC_015672.1 1945800 1947140 R PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089:IPR001249; KEGG: ddf:DEFDS_0456 acetyl-CoA carboxylase biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; acetyl-CoA carboxylase, biotin carboxylase complement(1945800..1947140) Flexistipes sinusarabici DSM 4947 10816137 YP_004604027.1 CDS Flexsi_1821 NC_015672.1 1947160 1947624 R PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR013185:IPR001059:IPR015365:IPR011768; KEGG: cni:Calni_0233 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P; acetyl-CoA carboxylase, biotin carboxyl carrier protein complement(1947160..1947624) Flexistipes sinusarabici DSM 4947 10816138 YP_004604028.1 CDS Flexsi_1822 NC_015672.1 1947634 1948206 R PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: ddf:DEFDS_0454 X-Pro dipeptidase; PFAM: Peptidase M24, structural domain; Creatinase; SPTR: X-Pro dipeptidase; elongation factor P complement(1947634..1948206) Flexistipes sinusarabici DSM 4947 10816139 YP_004604029.1 CDS Flexsi_1823 NC_015672.1 1948215 1949267 R PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0757 3-dehydroquinate dehydratase II; HAMAP: Dehydroquinase, class II; InterPro IPR001874; KEGG: ddf:DEFDS_0453 3-dehydroquinate dehydratase II; PFAM: Dehydroquinase, class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase II; TIGRFAM: Dehydroquinase, class II; peptidase M24 complement(1948215..1949267) Flexistipes sinusarabici DSM 4947 10816140 YP_004604030.1 CDS Flexsi_1824 NC_015672.1 1949287 1949718 R PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; InterPro IPR004942; KEGG: ddf:DEFDS_0452 hypothetical protein; PFAM: Dynein light chain-related; SPTR: Putative uncharacterized protein; 3-dehydroquinate dehydratase complement(1949287..1949718) Flexistipes sinusarabici DSM 4947 10816141 YP_004604031.1 CDS Flexsi_1825 NC_015672.1 1949719 1950075 R PFAM: Roadblock/LC7 domain; InterPro IPR019734:IPR001440:IPR013105; KEGG: ddf:DEFDS_0451 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; Roadblock/LC7 family protein complement(1949719..1950075) Flexistipes sinusarabici DSM 4947 10816142 YP_004604032.1 CDS Flexsi_1826 NC_015672.1 1950068 1951063 R COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase; InterPro IPR002658:IPR016037; KEGG: cni:Calni_0228 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; hypothetical protein complement(1950068..1951063) Flexistipes sinusarabici DSM 4947 10816143 YP_004604033.1 CDS Flexsi_1827 NC_015672.1 1951119 1952165 R PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: ddf:DEFDS_0449 shikimate kinase; PFAM: Shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; 3-dehydroquinate synthase complement(1951119..1952165) Flexistipes sinusarabici DSM 4947 10816144 YP_004604034.1 CDS Flexsi_1828 NC_015672.1 1952158 1952661 R PFAM: Shikimate kinase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001460; KEGG: ddf:DEFDS_0448 hypothetical protein; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative uncharacterized protein; shikimate kinase complement(1952158..1952661) Flexistipes sinusarabici DSM 4947 10816145 YP_004604035.1 CDS Flexsi_1829 NC_015672.1 1952682 1954394 R PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase rdgB; InterPro IPR002637; KEGG: ddf:DEFDS_0447 nucleoside-triphosphatase; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein; peptidoglycan glycosyltransferase complement(1952682..1954394) Flexistipes sinusarabici DSM 4947 10816146 YP_004604036.1 CDS Flexsi_1830 NC_015672.1 1954384 1954986 R PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR001247:IPR015847:IPR002381; KEGG: ddf:DEFDS_0446 tRNA nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; nucleoside-triphosphatase rdgB complement(1954384..1954986) Flexistipes sinusarabici DSM 4947 10816147 YP_004604037.1 CDS Flexsi_1831 NC_015672.1 1954988 1955704 R PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; InterPro IPR007712:IPR012753; KEGG: sde:Sde_2750 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system protein; TIGRFAM: Addiction module toxin, RelE/StbE; ribonuclease PH complement(1954988..1955704) Flexistipes sinusarabici DSM 4947 10816148 YP_004604038.1 CDS Flexsi_1832 NC_015672.1 1955841 1956164 R PFAM: Plasmid stabilisation system protein; InterPro IPR003756:IPR006442; KEGG: sde:Sde_2751 ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: Prevent-host-death protein; RelE/StbE family addiction module toxin complement(1955841..1956164) Flexistipes sinusarabici DSM 4947 10816149 YP_004604039.1 CDS Flexsi_1833 NC_015672.1 1956164 1956439 R PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR003593:IPR000523:IPR004482; KEGG: ddf:DEFDS_2092 Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Mg chelatase-related protein; TIGRFAM: Mg chelatase-related protein; prevent-host-death family protein complement(1956164..1956439) Flexistipes sinusarabici DSM 4947 10816150 YP_004604040.1 CDS Flexsi_1834 NC_015672.1 1956749 1958272 R PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142:IPR004635; KEGG: ddf:DEFDS_2093 signal peptide peptidase SppA; PFAM: Peptidase S49; SPTR: Signal peptide peptidase SppA; TIGRFAM: Peptidase S49, SppA; sigma 54 interacting domain-containing protein complement(1956749..1958272) Flexistipes sinusarabici DSM 4947 10816151 YP_004604041.1 CDS Flexsi_1835 NC_015672.1 1958346 1959218 R PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837; KEGG: ddf:DEFDS_2094 Ca2+:cation antiporter, CaCA family; PFAM: Sodium/calcium exchanger membrane region; SPTR: Ca2+:cation antiporter, CaCA family; signal peptide peptidase SppA, 36K type complement(1958346..1959218) Flexistipes sinusarabici DSM 4947 10816152 YP_004604042.1 CDS Flexsi_1836 NC_015672.1 1959231 1960205 R PFAM: Sodium/calcium exchanger protein; COGs: COG0539 Ribosomal protein S1; InterPro IPR003029; KEGG: dap:Dacet_2952 hydroxymethylbutenyl pyrophosphate reductase; PFAM: Ribosomal protein S1, RNA binding domain; SPTR: Hydroxymethylbutenyl pyrophosphate reductase; sodium/calcium exchanger membrane region complement(1959231..1960205) Flexistipes sinusarabici DSM 4947 10816153 YP_004604043.1 CDS Flexsi_1837 NC_015672.1 1960212 1961933 R PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: ddf:DEFDS_2096 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: LytB protein; RNA binding S1 domain-containing protein complement(1960212..1961933) Flexistipes sinusarabici DSM 4947 10816154 YP_004604044.1 CDS Flexsi_1838 NC_015672.1 1961914 1962768 R PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR000623:IPR011994:IPR003136; KEGG: cni:Calni_0093 cytidylate kinase; PFAM: Cytidylate kinase region; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase complement(1961914..1962768) Flexistipes sinusarabici DSM 4947 10816155 YP_004604045.1 CDS Flexsi_1839 NC_015672.1 1962765 1963448 R PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; InterPro IPR001986:IPR006264; KEGG: cni:Calni_0092 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; cytidylate kinase complement(1962765..1963448) Flexistipes sinusarabici DSM 4947 10816156 YP_004604046.1 CDS Flexsi_1840 NC_015672.1 1963445 1964734 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: ddf:DEFDS_2099 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; 3-phosphoshikimate 1-carboxyvinyltransferase complement(1963445..1964734) Flexistipes sinusarabici DSM 4947 10816157 YP_004604047.1 CDS Flexsi_1841 NC_015672.1 1964721 1965551 R PFAM: Prephenate dehydrogenase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006268; KEGG: ddf:DEFDS_2100 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; prephenate dehydrogenase complement(1964721..1965551) Flexistipes sinusarabici DSM 4947 10816158 YP_004604048.1 CDS Flexsi_1842 NC_015672.1 1965551 1966570 R PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839:IPR005861; KEGG: cni:Calni_0089 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; phospho-2-dehydro-3-deoxyheptonate aldolase complement(1965551..1966570) Flexistipes sinusarabici DSM 4947 10816159 YP_004604049.1 CDS Flexsi_1843 NC_015672.1 1966573 1967670 R PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0077 Prephenate dehydratase; InterPro IPR020822:IPR001086:IPR002912:IPR010957; KEGG: cni:Calni_0088 chorismate mutase; prephenate dehydratase; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; SPTR: Chorismate mutase; prephenate dehydratase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; histidinol-phosphate aminotransferase complement(1966573..1967670) Flexistipes sinusarabici DSM 4947 10816160 YP_004604050.1 CDS Flexsi_1844 NC_015672.1 1967667 1968737 R PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of gram positive AroA protein; chorismate mutase domain of proteobacterial P-protein, clade 2; KEGG: cni:Calni_0584 hypothetical protein; SPTR: Putative uncharacterized protein; chorismate mutase complement(1967667..1968737) Flexistipes sinusarabici DSM 4947 10816161 YP_004604051.1 CDS Flexsi_1845 NC_015672.1 1968911 1969411 D PFAM: Sporulation and spore germination; COGs: COG0655 Multimeric flavodoxin WrbA; HAMAP: Flavoprotein wrbA; InterPro IPR008254:IPR010089; KEGG: glo:Glov_0105 TrpR binding protein WrbA; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Flavoprotein wrbA; TIGRFAM: Flavoprotein WrbA; hypothetical protein 1968911..1969411 Flexistipes sinusarabici DSM 4947 10816162 YP_004604052.1 CDS Flexsi_1846 NC_015672.1 1969450 1970064 R PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; COGs: COG1592 Rubrerythrin; InterPro IPR003251; KEGG: ddf:DEFDS_1568 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; flavoprotein WrbA complement(1969450..1970064) Flexistipes sinusarabici DSM 4947 10816163 YP_004604053.1 CDS Flexsi_1847 NC_015672.1 1970218 1970814 D PFAM: Rubrerythrin; InterPro IPR000297; KEGG: cni:Calni_0648 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; rubrerythrin 1970218..1970814 Flexistipes sinusarabici DSM 4947 10816164 YP_004604054.1 CDS Flexsi_1848 NC_015672.1 1970947 1971906 R PFAM: PPIC-type PPIASE domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; PpiC-type peptidyl-prolyl cis-trans isomerase complement(1970947..1971906) Flexistipes sinusarabici DSM 4947 10816165 YP_004604055.1 CDS Flexsi_1849 NC_015672.1 1972005 1973324 R PFAM: Transposase DDE domain; COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: ddf:DEFDS_0404 phosphate transport system regulator; PFAM: PhoU; SPTR: Phosphate transport system regulator; TIGRFAM: PhoU; transposase IS4 family protein complement(1972005..1973324) Flexistipes sinusarabici DSM 4947 10816166 YP_004604056.1 CDS Flexsi_1850 NC_015672.1 1973788 1974483 D PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cni:Calni_1570 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; phosphate uptake regulator PhoU 1973788..1974483 Flexistipes sinusarabici DSM 4947 10816167 YP_004604057.1 CDS Flexsi_1851 NC_015672.1 1974476 1975147 D PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dap:Dacet_1228 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; winged helix family two component transcriptional regulator 1974476..1975147 Flexistipes sinusarabici DSM 4947 10816168 YP_004604058.1 CDS Flexsi_1852 NC_015672.1 1975151 1976872 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG1893 Ketopantoate reductase; InterPro IPR013332:IPR013752:IPR000086:IPR003710; KEGG: ddf:DEFDS_2126 hypothetical protein; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; NUDIX hydrolase domain; PRIAM: 2-dehydropantoate 2-reductase; SPTR: Putative uncharacterized protein; TIGRFAM: Ketopantoate reductase ApbA/PanE; integral membrane sensor signal transduction histidine kinase 1975151..1976872 Flexistipes sinusarabici DSM 4947 10816169 YP_004604059.1 CDS Flexsi_1853 NC_015672.1 1977102 1978442 R PFAM: Ketopantoate reductase PanE/ApbA; NUDIX domain; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR013093:IPR 019489; KEGG: ddf:DEFDS_2127 ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpC; 2-dehydropantoate 2-reductase complement(1977102..1978442) Flexistipes sinusarabici DSM 4947 10816170 YP_004604060.1 CDS Flexsi_1854 NC_015672.1 1978420 1980819 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); COGs: COG2716 Glycine cleavage system regulatory protein; InterPro IPR002912; KEGG: ddf:DEFDS_2129 glycine cleavage system transcriptional repressor; PFAM: Amino acid-binding ACT; SPTR: Glycine cleavage system transcriptional repressor; ATPase AAA-2 domain-containing protein complement(1978420..1980819) Flexistipes sinusarabici DSM 4947 10816171 YP_004604061.1 CDS Flexsi_1855 NC_015672.1 1980999 1981556 D PFAM: ACT domain; COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: ddf:DEFDS_2130 polypeptide deformylase; PFAM: Formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase 2; TIGRFAM: Formylmethionine deformylase; amino acid-binding ACT domain-containing protein 1980999..1981556 Flexistipes sinusarabici DSM 4947 10816172 YP_004604062.1 CDS Flexsi_1856 NC_015672.1 1981559 1982062 D PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: cni:Calni_0206 D-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; PRIAM: Glyoxylate reductase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; peptide deformylase 1981559..1982062 Flexistipes sinusarabici DSM 4947 10816173 YP_004604063.1 CDS Flexsi_1857 NC_015672.1 1982059 1983033 D PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; glyoxylate reductase 1982059..1983033 Flexistipes sinusarabici DSM 4947 10816174 YP_004604064.1 CDS Flexsi_1858 NC_015672.1 1983838 1984371 D PFAM: Uncharacterised protein family (UPF0153); COGs: COG1484 DNA replication protein; InterPro IPR002611; KEGG: ere:EUBREC_3222 possible transposase; PFAM: IstB-like ATP-binding protein; SPTR: DNA replication protein; hypothetical protein 1983838..1984371 Flexistipes sinusarabici DSM 4947 10816177 YP_004604065.1 CDS Flexsi_1859 NC_015672.1 1984385 1985152 R PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal; This gene is disrupted by insertion of repetitive element; manually curated; IstB domain-containing protein ATP-binding protein complement(1984385..1985152) Flexistipes sinusarabici DSM 4947 10816178 YP_004604066.1 CDS Flexsi_1861 NC_015672.1 1985532 1986899 D PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 1985532..1986899 Flexistipes sinusarabici DSM 4947 10816180 YP_004604067.1 CDS Flexsi_1863 NC_015672.1 1988777 1988992 R PFAM: Transcriptional Coactivator p15 (PC4); transcriptional coactivator p15 complement(1988777..1988992) Flexistipes sinusarabici DSM 4947 10816182 YP_004604068.1 CDS Flexsi_1864 NC_015672.1 1989009 1989356 R COGs: COG3091 conserved hypothetical protein; InterPro IPR006640:IPR005622; KEGG: cni:Calni_0195 hypothetical protein; SMART: Protein of unknown function SprT; SPTR: Putative uncharacterized protein; hypothetical protein complement(1989009..1989356) Flexistipes sinusarabici DSM 4947 10816183 YP_004604069.1 CDS Flexsi_1865 NC_015672.1 1989349 1989858 R PFAM: SprT-like family; hypothetical protein complement(1989349..1989858) Flexistipes sinusarabici DSM 4947 10816184 YP_004604070.1 CDS Flexsi_1866 NC_015672.1 1990526 1990732 R PFAM: Protein of unknown function (DUF2283); KEGG: cli:Clim_0720 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1990526..1990732) Flexistipes sinusarabici DSM 4947 10816186 YP_004604071.1 CDS Flexsi_1867 NC_015672.1 1990729 1990971 R hypothetical protein complement(1990729..1990971) Flexistipes sinusarabici DSM 4947 10816187 YP_004604072.1 CDS Flexsi_1868 NC_015672.1 1991289 1991390 R InterPro IPR018649; KEGG: ddf:DEFDS_0309 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; hypothetical protein complement(1991289..1991390) Flexistipes sinusarabici DSM 4947 10816188 YP_004604073.1 CDS Flexsi_1869 NC_015672.1 1991557 1991790 R PFAM: Predicted membrane protein (DUF2078); KEGG: ddf:DEFDS_0913 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(1991557..1991790) Flexistipes sinusarabici DSM 4947 10816189 YP_004604074.1 CDS Flexsi_1870 NC_015672.1 1991858 1992271 R PFAM: Protein of unknown function (DUF2874); InterPro IPR019020; KEGG: ppr:PBPRB0283 hypothetical protein; PFAM: Cytochrome c-552/DMSO reductase-like, haem-binding domain; SPTR: Putative uncharacterized protein; hypothetical protein complement(1991858..1992271) Flexistipes sinusarabici DSM 4947 10816190 YP_004604075.1 CDS Flexsi_1871 NC_015672.1 1992834 1993946 R PFAM: Ethylbenzene dehydrogenase; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver; cytochrome c-552/DMSO reductase-like, heme-binding domain-containing protein complement(1992834..1993946) Flexistipes sinusarabici DSM 4947 10816191 YP_004604076.1 CDS Flexsi_1872 NC_015672.1 1994065 1994703 R PFAM: Response regulator receiver domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661:IPR003594; KEGG: ATPase ATP-binding domain-containing protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: ATP-binding region ATPase domain protein; response regulator receiver protein complement(1994065..1994703) Flexistipes sinusarabici DSM 4947 10816192 YP_004604077.1 CDS Flexsi_1873 NC_015672.1 1994706 1996115 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fnu:FN1352 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; integral membrane sensor signal transduction histidine kinase complement(1994706..1996115) Flexistipes sinusarabici DSM 4947 10816193 YP_004604078.1 CDS Flexsi_1874 NC_015672.1 1996177 1996860 R PFAM: ABC transporter; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: yen:YE2493 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Raw score 9.02; phosphonate-transporting ATPase complement(1996177..1996860) Flexistipes sinusarabici DSM 4947 10816194 YP_004604079.1 CDS Flexsi_1875 NC_015672.1 1996882 1998030 R PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: clo:HMPREF0868_0236 efflux ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Permease domain protein; hypothetical protein complement(1996882..1998030) Flexistipes sinusarabici DSM 4947 10816195 YP_004604080.1 CDS Flexsi_1876 NC_015672.1 1998042 1999334 R PFAM: Predicted permease; COGs: COG4393 membrane protein; InterPro IPR018758; KEGG: tde:TDE1512 hypothetical protein; PFAM: Protein of unknown function DUF2318, membrane; SPTR: Membrane protein, putative; hypothetical protein complement(1998042..1999334) Flexistipes sinusarabici DSM 4947 10816196 YP_004604081.1 CDS Flexsi_1877 NC_015672.1 1999346 2000614 R PFAM: Predicted membrane protein (DUF2318); COGs: COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport; InterPro IPR018470; KEGG: yen:YE2496 hypothetical protein; PFAM: Ferrous iron transport protein, bacterial; SPTR: Membrane antigen; hypothetical protein complement(1999346..2000614) Flexistipes sinusarabici DSM 4947 10816197 YP_004604082.1 CDS Flexsi_1878 NC_015672.1 2000884 2001429 R PFAM: Fe2+ transport protein; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: cko:CKO_02057 hypothetical protein; PFAM: Iron permease FTR1; SPTR: Putative iron permease; ferrous iron transport protein complement(2000884..2001429) Flexistipes sinusarabici DSM 4947 10816198 YP_004604083.1 CDS Flexsi_1879 NC_015672.1 2001467 2002669 R PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein; KEGG: glo:Glov_1973 hypothetical protein; SPTR: Putative uncharacterized protein; iron permease FTR1 complement(2001467..2002669) Flexistipes sinusarabici DSM 4947 10816199 YP_004604084.1 CDS Flexsi_1880 NC_015672.1 2003212 2003682 R COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: sfu:Sfum_3450 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; hypothetical protein complement(2003212..2003682) Flexistipes sinusarabici DSM 4947 10816200 YP_004604085.1 CDS Flexsi_1881 NC_015672.1 2003916 2005166 D PFAM: Vacuole effluxer Atg22 like; InterPro IPR000182; KEGG: hse:Hsero_1858 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase protein; major facilitator superfamily protein 2003916..2005166 Flexistipes sinusarabici DSM 4947 10816201 YP_004604086.1 CDS Flexsi_1882 NC_015672.1 2005541 2006032 D PFAM: Acetyltransferase (GNAT) family; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 2005541..2006032 Flexistipes sinusarabici DSM 4947 10816202 YP_004604087.1 CDS Flexsi_1883 NC_015672.1 2006224 2006664 D PFAM: Protein required for attachment to host cells; manually curated; hypothetical protein 2006224..2006664 Flexistipes sinusarabici DSM 4947 10816203 YP_004604088.1 CDS Flexsi_1885 NC_015672.1 2007458 2007985 R COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014188:IPR013154:IPR013149; KEGG: amc:MADE_01969 alcohol dehydrogenase, zinc-containing; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-containing; TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP; putative signaling protein complement(2007458..2007985) Flexistipes sinusarabici DSM 4947 10816205 YP_004604089.1 CDS Flexsi_1886 NC_015672.1 2008392 2009387 D PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family; KEGG: drt:Dret_1468 anti-ECFsigma factor, ChrR; SPTR: Anti-ECFsigma factor, ChrR; YhdH/YhfP family quinone oxidoreductase 2008392..2009387 Flexistipes sinusarabici DSM 4947 10816206 YP_004604090.1 CDS Flexsi_1887 NC_015672.1 2009389 2010015 D InterPro IPR000620; KEGG: ddf:DEFDS_0955 drug/metabolite transporter DME family; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Drug/metabolite transporter, DME family; anti-ECFsigma factor ChrR 2009389..2010015 Flexistipes sinusarabici DSM 4947 10816207 YP_004604091.1 CDS Flexsi_1888 NC_015672.1 2010315 2011208 R PFAM: EamA-like transporter family; hypothetical protein complement(2010315..2011208) Flexistipes sinusarabici DSM 4947 10816208 YP_004604092.1 CDS Flexsi_1889 NC_015672.1 2011682 2012116 R PFAM: Uncharacterized protein conserved in bacteria (DUF2062); COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269; KEGG: ddf:DEFDS_1706 ATP-dependent Lon protease; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; hypothetical protein complement(2011682..2012116) Flexistipes sinusarabici DSM 4947 10816210 YP_004604093.1 CDS Flexsi_1890 NC_015672.1 2012139 2014469 R PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1707 small heat shock protein, class I; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein, class I; anti-sigma H sporulation factor LonB complement(2012139..2014469) Flexistipes sinusarabici DSM 4947 10816211 YP_004604094.1 CDS Flexsi_1891 NC_015672.1 2014498 2014899 R PFAM: Hsp20/alpha crystallin family; COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005771:IPR005835; KEGG: cni:Calni_1635 udp-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: UDP-glucose pyrophosphorylase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; heat shock protein Hsp20 complement(2014498..2014899) Flexistipes sinusarabici DSM 4947 10816212 YP_004604095.1 CDS Flexsi_1892 NC_015672.1 2014886 2015770 R PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: ddf:DEFDS_1709 hypothetical protein; PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; SPTR: Putative uncharacterized protein; UTP-glucose-1-phosphate uridylyltransferase complement(2014886..2015770) Flexistipes sinusarabici DSM 4947 10816213 YP_004604096.1 CDS Flexsi_1893 NC_015672.1 2015878 2016666 R PFAM: Memo-like protein; KEGG: dap:Dacet_1841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2015878..2016666) Flexistipes sinusarabici DSM 4947 10816214 YP_004604097.1 CDS Flexsi_1894 NC_015672.1 2016645 2017490 R COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050:IPR006638:IPR007197; KEGG: ddf:DEFDS_1711 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: putative menaquinone biosynthesis protein; FO synthase, subunit 2; hypothetical protein complement(2016645..2017490) Flexistipes sinusarabici DSM 4947 10816215 YP_004604098.1 CDS Flexsi_1895 NC_015672.1 2017471 2018478 R PFAM: Radical SAM superfamily; TIGRFAM: putative menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily; COGs: COG2206 HD-GYP domain; InterPro IPR001789:IPR003607:IPR006674; KEGG: ddf:DEFDS_1712 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; SPTR: Putative uncharacterized protein; putative menaquinone biosynthesis protein complement(2017471..2018478) Flexistipes sinusarabici DSM 4947 10816216 YP_004604099.1 CDS Flexsi_1896 NC_015672.1 2018475 2019881 R PFAM: HD domain; Response regulator receiver domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: cni:Calni_0537 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein DnaJ domain protein; response regulator receiver modulated metal dependent phosphohydrolase complement(2018475..2019881) Flexistipes sinusarabici DSM 4947 10816217 YP_004604100.1 CDS Flexsi_1897 NC_015672.1 2020562 2021221 D PFAM: DnaJ domain; heat shock protein DnaJ domain-containing protein 2020562..2021221 Flexistipes sinusarabici DSM 4947 10816218 YP_004604101.1 CDS Flexsi_1898 NC_015672.1 2021772 2021960 R COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205:IPR001041:IPR008333:IPR001433; KEGG: ddf:DEFDS_1913 Na(+)-translocating NADH-quinone reductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase FAD-binding region; PRIAM: Phenol 2-monooxygenase; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; hypothetical protein complement(2021772..2021960) Flexistipes sinusarabici DSM 4947 10816219 YP_004604102.1 CDS Flexsi_1899 NC_015672.1 2021960 2023180 R PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; HAMAP: Na(+)-translocating NADH-quinone reductase subunit E; InterPro IPR010967:IPR003667; KEGG: ddf:DEFDS_1914 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NADH:ubiquinone oxidoreductase subunit F complement(2021960..2023180) Flexistipes sinusarabici DSM 4947 10816220 YP_004604103.1 CDS Flexsi_1900 NC_015672.1 2023193 2023804 R PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR011292:IPR003667; KEGG: ddf:DEFDS_1915 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Na(+)-translocating NADH-quinone reductase subunit D; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; Na(+)-translocating NADH-quinone reductase subunit E complement(2023193..2023804) Flexistipes sinusarabici DSM 4947 10816221 YP_004604104.1 CDS Flexsi_1901 NC_015672.1 2023810 2024424 R PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR010204:IPR007329; KEGG: dap:Dacet_2020 NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding; SPTR: NADH:ubiquinone oxidoreductase, subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NADH:ubiquinone oxidoreductase subunit D complement(2023810..2024424) Flexistipes sinusarabici DSM 4947 10816222 YP_004604105.1 CDS Flexsi_1902 NC_015672.1 2024421 2025206 R PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR010966:IPR004338; KEGG: dap:Dacet_2021 NADH:ubiquinone oxidoreductase, subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: NADH:ubiquinone oxidoreductase, subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NADH:ubiquinone oxidoreductase subunit C complement(2024421..2025206) Flexistipes sinusarabici DSM 4947 10816223 YP_004604106.1 CDS Flexsi_1903 NC_015672.1 2025196 2026395 R PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; InterPro IPR008703; KEGG: ilo:IL1050 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: Na-translocating NADH-quinone reductase subunit A; NADH:ubiquinone oxidoreductase subunit B complement(2025196..2026395) Flexistipes sinusarabici DSM 4947 10816224 YP_004604107.1 CDS Flexsi_1904 NC_015672.1 2026396 2027742 R PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; Na(+)-translocating NADH-quinone reductase subunit A complement(2026396..2027742) Flexistipes sinusarabici DSM 4947 10816225 YP_004604108.1 CDS Flexsi_1905 NC_015672.1 2027843 2028097 R COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; hypothetical protein complement(2027843..2028097) Flexistipes sinusarabici DSM 4947 10816226 YP_004604109.1 CDS Flexsi_1906 NC_015672.1 2028275 2029798 D PFAM: Integrase core domain; COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: toc:Toce_0299 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; integrase catalytic subunit 2028275..2029798 Flexistipes sinusarabici DSM 4947 10816227 YP_004604110.1 CDS Flexsi_1907 NC_015672.1 2029785 2030471 D PFAM: IstB-like ATP binding protein; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IstB domain-containing protein ATP-binding protein 2029785..2030471 Flexistipes sinusarabici DSM 4947 10816228 YP_004604111.1 CDS Flexsi_1908 NC_015672.1 2030638 2031903 R COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; transposase IS4 family protein complement(2030638..2031903) Flexistipes sinusarabici DSM 4947 10816229 YP_004604112.1 CDS Flexsi_1909 NC_015672.1 2032751 2033764 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS116/IS110/IS902 family protein 2032751..2033764 Flexistipes sinusarabici DSM 4947 10816230 YP_004604113.1 CDS Flexsi_1910 NC_015672.1 2034064 2035113 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: cni:Calni_0337 CoA-binding domain protein; PFAM: CoA-binding; SPTR: CoA-binding domain protein; transposase IS4 family protein complement(2034064..2035113) Flexistipes sinusarabici DSM 4947 10816231 YP_004604114.1 CDS Flexsi_1911 NC_015672.1 2035365 2035778 D PFAM: CoA binding domain; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: ddf:DEFDS_1021 carbamoylphosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoylphosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit; CoA-binding domain-containing protein 2035365..2035778 Flexistipes sinusarabici DSM 4947 10816232 YP_004604115.1 CDS Flexsi_1912 NC_015672.1 2036383 2037513 D PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: ddf:DEFDS_1020 aminodeoxychorismate lyase; PFAM: Uncharacterised protein family YceG-like; SPTR: Aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; carbamoyl-phosphate synthase small subunit 2036383..2037513 Flexistipes sinusarabici DSM 4947 10816233 YP_004604116.1 CDS Flexsi_1913 NC_015672.1 2037506 2038498 D PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; manually curated; aminodeoxychorismate lyase 2037506..2038498 Flexistipes sinusarabici DSM 4947 10816234 YP_004604117.1 CDS Flexsi_1915 NC_015672.1 2039874 2040923 R PFAM: Transposase DDE domain; Transposase domain (DUF772); transposase IS4 family protein complement(2039874..2040923) Flexistipes sinusarabici DSM 4947 10816236 YP_004604118.1 CDS Flexsi_1916 NC_015672.1 2041011 2041148 R COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: mac:MA2579 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase, IS21; hypothetical protein complement(2041011..2041148) Flexistipes sinusarabici DSM 4947 10816237 YP_004604119.1 CDS Flexsi_1917 NC_015672.1 2041145 2042389 R PFAM: Integrase core domain; integrase catalytic subunit complement(2041145..2042389) Flexistipes sinusarabici DSM 4947 10816238 YP_004604120.1 CDS Flexsi_1918 NC_015672.1 2042474 2042629 R COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; hypothetical protein complement(2042474..2042629) Flexistipes sinusarabici DSM 4947 10816239 YP_004604121.1 CDS Flexsi_1919 NC_015672.1 2042622 2042933 R PFAM: Nucleotidyltransferase domain; InterPro IPR011462; KEGG: pca:Pcar_2264 transposase and inactivated derivatives; SPTR: Putative uncharacterized protein; DNA polymerase beta domain-containing protein complement(2042622..2042933) Flexistipes sinusarabici DSM 4947 10816240 YP_004604122.1 CDS Flexsi_1920 NC_015672.1 2043192 2043839 D PFAM: Transposase IS200 like; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 2043192..2043839 Flexistipes sinusarabici DSM 4947 10816241 YP_004604123.1 CDS Flexsi_1921 NC_015672.1 2043987 2045306 D PFAM: Transposase DDE domain; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: cni:Calni_1143 glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyl transferase, family 4, conserved region; transposase IS4 family protein 2043987..2045306 Flexistipes sinusarabici DSM 4947 10816242 YP_004604124.1 CDS Flexsi_1922 NC_015672.1 2045575 2046615 D PFAM: Glycosyl transferase family 4; manually curated; glycosyl transferase family protein 2045575..2046615 Flexistipes sinusarabici DSM 4947 10816243 YP_004604125.1 CDS Flexsi_1925 NC_015672.1 2047961 2049328 R PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein complement(2047961..2049328) Flexistipes sinusarabici DSM 4947 10816246 YP_004604126.1 CDS Flexsi_1927 NC_015672.1 2049600 2051435 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(2049600..2051435) Flexistipes sinusarabici DSM 4947 10816248 YP_004604127.1 CDS Flexsi_1929 NC_015672.1 2052597 2053409 D PFAM: IstB-like ATP binding protein; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IstB domain-containing protein ATP-binding protein 2052597..2053409 Flexistipes sinusarabici DSM 4947 10816250 YP_004604128.1 CDS Flexsi_1930 NC_015672.1 2053704 2055380 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 2053704..2055380 Flexistipes sinusarabici DSM 4947 10816251 YP_004604129.1 CDS Flexsi_1931 NC_015672.1 2055605 2056924 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(2055605..2056924) Flexistipes sinusarabici DSM 4947 10816252 YP_004604130.1 CDS Flexsi_1933 NC_015672.1 2058202 2059587 R PFAM: Aldehyde dehydrogenase family; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: hna:Hneap_2201 peptidase M24; PFAM: Creatinase; Peptidase M24, structural domain; SPTR: Peptidase M24; succinate-semialdehyde dehydrogenase complement(2058202..2059587) Flexistipes sinusarabici DSM 4947 10816254 YP_004604131.1 CDS Flexsi_1934 NC_015672.1 2059607 2060902 R PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR004637:IPR005814; KEGG: hna:Hneap_2200 2,4-diaminobutyrate 4-transaminase; PFAM: Aminotransferase class-III; PRIAM: Diaminobutyrate--2-oxoglutarate transaminase; SPTR: Diaminobutyrate--2-oxoglutarate transaminase; TIGRFAM: Diaminobutyrate-2-oxoglutarate transaminase; creatinase complement(2059607..2060902) Flexistipes sinusarabici DSM 4947 10816255 YP_004604132.1 CDS Flexsi_1935 NC_015672.1 2060911 2062164 R PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: ant:Arnit_1214 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Hippurate hydrolase; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; 2,4-diaminobutyrate 4-transaminase complement(2060911..2062164) Flexistipes sinusarabici DSM 4947 10816256 YP_004604133.1 CDS Flexsi_1936 NC_015672.1 2062175 2063329 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR011822:IPR003726:IPR000489:IPR003759:IPR 006158:IPR004223; KEGG: ddf:DEFDS_1683 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; amidohydrolase complement(2062175..2063329) Flexistipes sinusarabici DSM 4947 10816257 YP_004604134.1 CDS Flexsi_1937 NC_015672.1 2064115 2067486 D PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR014343:IPR003593:IPR003439; KEGG: rhi:NGR_a01510 probable amino-acid ABC transporter ATP-binding protein y4tH; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable amino-acid ABC transporter ATP-binding protein y4tH; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, ATP-binding protein; methionine synthase 2064115..2067486 Flexistipes sinusarabici DSM 4947 10816258 YP_004604135.1 CDS Flexsi_1938 NC_015672.1 2067634 2068413 R PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR014341:IPR010065:IPR000515; KEGG: rhi:NGR_a01520 probable amino-acid ABC transporter permease y4tG; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Probable amino-acid ABC transporter permease protein y4tG; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ectoine/hydroxyectoine ABC transporter ATP-binding protein complement(2067634..2068413) Flexistipes sinusarabici DSM 4947 10816259 YP_004604136.1 CDS Flexsi_1939 NC_015672.1 2068425 2069120 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuD; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR014342:IPR010065:IPR000515; KEGG: rhi:NGR_a01530 probable amino-acid ABC transporter permease y4tF; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Probable amino-acid ABC transporter permease protein y4tF; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ectoine/hydroxyectoine ABC transporter permease EhuD complement(2068425..2069120) Flexistipes sinusarabici DSM 4947 10816260 YP_004604137.1 CDS Flexsi_1940 NC_015672.1 2069120 2069797 R PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR014337:IPR001638; KEGG: rhi:NGR_a01540 probable periplasmic amino-acid binding protein y4tE of ABC-transporter; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Probable amino-acid ABC transporter periplasmic-binding protein y4tE; TIGRFAM: Ectoine/hydroxyEctoine ABC transporter solute-binding protein; ectoine/hydroxyectoine ABC transporter permease EhuC complement(2069120..2069797) Flexistipes sinusarabici DSM 4947 10816261 YP_004604138.1 CDS Flexsi_1941 NC_015672.1 2069883 2070764 R PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: ddf:DEFDS_0114 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; ectoine/hydroxyectoine ABC transporter solute-binding protein complement(2069883..2070764) Flexistipes sinusarabici DSM 4947 10816262 YP_004604139.1 CDS Flexsi_1942 NC_015672.1 2071141 2072388 R PFAM: Protein of unknown function (DUF1015); COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; InterPro IPR002307:IPR002305; KEGG: ddf:DEFDS_0113 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; hypothetical protein complement(2071141..2072388) Flexistipes sinusarabici DSM 4947 10816263 YP_004604140.1 CDS Flexsi_1943 NC_015672.1 2072402 2073601 R PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: ddf:DEFDS_0112 type IV prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; PRIAM: Prepilin peptidase; SPTR: Type IV prepilin peptidase; tyrosyl-tRNA synthetase complement(2072402..2073601) Flexistipes sinusarabici DSM 4947 10816264 YP_004604141.1 CDS Flexsi_1944 NC_015672.1 2073611 2074393 R PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: ddf:DEFDS_0110 hypothetical protein; PFAM: Protein of unknown function DUF1009; SPTR: Putative uncharacterized protein; prepilin peptidase complement(2073611..2074393) Flexistipes sinusarabici DSM 4947 10816265 YP_004604142.1 CDS Flexsi_1945 NC_015672.1 2074509 2075327 R PFAM: Protein of unknown function (DUF1009); COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: cni:Calni_0305 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; hypothetical protein complement(2074509..2075327) Flexistipes sinusarabici DSM 4947 10816266 YP_004604143.1 CDS Flexsi_1946 NC_015672.1 2075324 2076298 R PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451; KEGG: cni:Calni_0304 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineo-acyltransferase; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-(Acyl-carrier-protein)--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; oxidoreductase domain-containing protein complement(2075324..2076298) Flexistipes sinusarabici DSM 4947 10816267 YP_004604144.1 CDS Flexsi_1947 NC_015672.1 2076301 2077071 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; InterPro IPR010084:IPR013114; KEGG: ddf:DEFDS_0107 3R-hydroxymyristoyl ACP dehydrase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase complement(2076301..2077071) Flexistipes sinusarabici DSM 4947 10816268 YP_004604145.1 CDS Flexsi_1948 NC_015672.1 2077068 2077502 R PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR001451; KEGG: cni:Calni_0302 udp-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; (3R)-hydroxymyristoyl-ACP dehydratase complement(2077068..2077502) Flexistipes sinusarabici DSM 4947 10816269 YP_004604146.1 CDS Flexsi_1949 NC_015672.1 2077492 2078511 R PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR005632; KEGG: ddf:DEFDS_0105 outer membrane protein OmpH; PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein OmpH; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase complement(2077492..2078511) Flexistipes sinusarabici DSM 4947 10816270 YP_004604147.1 CDS Flexsi_1950 NC_015672.1 2078514 2079038 R PFAM: Outer membrane protein (OmpH-like); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: ddf:DEFDS_0104 hypothetical protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative uncharacterized protein; TIGRFAM: Outer membrane assembly protein, YaeT; outer membrane chaperone Skp complement(2078514..2079038) Flexistipes sinusarabici DSM 4947 10816271 YP_004604148.1 CDS Flexsi_1951 NC_015672.1 2079066 2081300 R PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: ATP phosphoribosyltransferase; InterPro IPR013820; KEGG: cni:Calni_0299 ATP phosphoribosyltransferase (homohexameric); PFAM: ATP phosphoribosyltransferase, catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; outer membrane protein assembly complex, YaeT protein complement(2079066..2081300) Flexistipes sinusarabici DSM 4947 10816272 YP_004604149.1 CDS Flexsi_1952 NC_015672.1 2081305 2081928 R PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: cni:Calni_0298 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; ATP phosphoribosyltransferase complement(2081305..2081928) Flexistipes sinusarabici DSM 4947 10816273 YP_004604150.1 CDS Flexsi_1953 NC_015672.1 2081921 2083180 R PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556:IPR019874:IPR013217; KEGG: ddf:DEFDS_0101 modification methylase HemK family; PFAM: Methyltransferase type 12; SPTR: Modification methylase, HemK family; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; UDP-N-acetylglucosamine1- carboxyvinyltransferase complement(2081921..2083180) Flexistipes sinusarabici DSM 4947 10816274 YP_004604151.1 CDS Flexsi_1954 NC_015672.1 2083168 2083998 R PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR004373:IPR005139:IPR000352; KEGG: ddf:DEFDS_0100 peptide chain release factor RF-1; PFAM: Class I peptide chain release factor; Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; protein-(glutamine-N5) methyltransferase complement(2083168..2083998) Flexistipes sinusarabici DSM 4947 10816275 YP_004604152.1 CDS Flexsi_1955 NC_015672.1 2084006 2085076 R PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: cni:Calni_0295 hypothetical protein; PFAM: Protein of unknown function DUF1385; SPTR: Putative uncharacterized protein; peptide chain release factor 1 complement(2084006..2085076) Flexistipes sinusarabici DSM 4947 10816276 YP_004604153.1 CDS Flexsi_1956 NC_015672.1 2085069 2085977 R PFAM: Protein of unknown function (DUF1385); COGs: COG1351 alternative thymidylate synthase; HAMAP: Thymidylate synthase thyX; InterPro IPR003669; KEGG: cni:Calni_0294 thymidylate synthase (fad); PFAM: Thymidylate synthase ThyX; SPTR: Thymidylate synthase thyX; TIGRFAM: Thymidylate synthase ThyX; hypothetical protein complement(2085069..2085977) Flexistipes sinusarabici DSM 4947 10816277 YP_004604154.1 CDS Flexsi_1957 NC_015672.1 2086164 2086898 R PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; COGs: COG0254 Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; InterPro IPR002150; KEGG: ddf:DEFDS_0097 50S ribosomal protein L31; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; thymidylate synthase ThyX complement(2086164..2086898) Flexistipes sinusarabici DSM 4947 10816278 YP_004604155.1 CDS Flexsi_1958 NC_015672.1 2086914 2087144 R PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: ddf:DEFDS_0248 30S ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; 50S ribosomal protein L31 complement(2086914..2087144) Flexistipes sinusarabici DSM 4947 10816279 YP_004604156.1 CDS Flexsi_1959 NC_015672.1 2087614 2088003 R PFAM: Ribosomal protein S9/S16; COGs: COG0102 Ribosomal protein L13; InterPro IPR005823:IPR005822; KEGG: ddf:DEFDS_0249 50S ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; 30S ribosomal protein S9 complement(2087614..2088003) Flexistipes sinusarabici DSM 4947 10816280 YP_004604157.1 CDS Flexsi_1960 NC_015672.1 2088015 2088440 R PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: cni:Calni_2013 LSU ribosomal protein l19p; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; 50S ribosomal protein L13 complement(2088015..2088440) Flexistipes sinusarabici DSM 4947 10816281 YP_004604158.1 CDS Flexsi_1961 NC_015672.1 2088503 2088859 R PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR002649:IPR016009:IPR019230; KEGG: ddf:DEFDS_0251 tRNA (guanine-N(1)-)-methyltransferase; PFAM: Protein of unknown function DUF2168; tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; 50S ribosomal protein L19 complement(2088503..2088859) Flexistipes sinusarabici DSM 4947 10816282 YP_004604159.1 CDS Flexsi_1962 NC_015672.1 2088856 2090160 R PFAM: tRNA (Guanine-1)-methyltransferase; Uncharacterized protein conserved in bacteria (DUF2168); TIGRFAM: tRNA (guanine-N1)-methyltransferase; COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR011961:IPR002676:IPR007903; KEGG: cni:Calni_2011 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; tRNA (guanine-N(1)-)-methyltransferase complement(2088856..2090160) Flexistipes sinusarabici DSM 4947 10816283 YP_004604160.1 CDS Flexsi_1963 NC_015672.1 2090147 2090689 R PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; COGs: COG1837 RNA-binding protein (contains KH domain); HAMAP: Uncharacterised protein family UPF0109, bacterial; InterPro IPR020627; KEGG: ddf:DEFDS_0253 hypothetical protein; SPTR: Putative uncharacterized protein; ribosome maturation factor rimM complement(2090147..2090689) Flexistipes sinusarabici DSM 4947 10816284 YP_004604161.1 CDS Flexsi_1964 NC_015672.1 2090704 2090934 R PFAM: KH domain; COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: cni:Calni_2009 SSU ribosomal protein s16p; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; hypothetical protein complement(2090704..2090934) Flexistipes sinusarabici DSM 4947 10816285 YP_004604162.1 CDS Flexsi_1965 NC_015672.1 2090956 2091234 R PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0541 Signal recognition particle GTPase; InterProIPR004780:IPR003593:IPR013822:IPR000897:IPR 004125; KEGG: ddf:DEFDS_0255 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; 30S ribosomal protein S16 complement(2090956..2091234) Flexistipes sinusarabici DSM 4947 10816286 YP_004604163.1 CDS Flexsi_1966 NC_015672.1 2091252 2092601 R PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: ddf:DEFDS_0315 dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; signal recognition particle protein complement(2091252..2092601) Flexistipes sinusarabici DSM 4947 10816287 YP_004604164.1 CDS Flexsi_1967 NC_015672.1 2092910 2093545 R PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; InterPro IPR005358; KEGG: ddf:DEFDS_0314 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein; dephospho-CoA kinase complement(2092910..2093545) Flexistipes sinusarabici DSM 4947 10816288 YP_004604165.1 CDS Flexsi_1968 NC_015672.1 2093559 2093810 R COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: ddf:DEFDS_0313 fumarylacetoacetate hydrolase family protein; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; SPTR: Fumarylacetoacetate hydrolase family protein; hypothetical protein complement(2093559..2093810) Flexistipes sinusarabici DSM 4947 10816289 YP_004604166.1 CDS Flexsi_1969 NC_015672.1 2093794 2094552 R PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR006675:IPR003607:IPR002646:IPR006674; KEGG: ddf:DEFDS_0057 tRNA nucleotidyltransferase (CCA-adding enzyme); PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: tRNA nucleotidyltransferase (CCA-adding enzyme); TIGRFAM: HDIG; 5-carboxymethyl-2-hydroxymuconate delta-isomerase complement(2093794..2094552) Flexistipes sinusarabici DSM 4947 10816290 YP_004604167.1 CDS Flexsi_1970 NC_015672.1 2094552 2095910 R PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: cni:Calni_1754 phosphodiesterase, mj0936 family; PFAM: Metallophosphoesterase; SPTR: Phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; polynucleotide adenylyltransferase/metal dependent phosphohydrolase complement(2094552..2095910) Flexistipes sinusarabici DSM 4947 10816291 YP_004604168.1 CDS Flexsi_1971 NC_015672.1 2096003 2096491 D PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR006076; KEGG: ddf:DEFDS_0059 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; phosphodiesterase 2096003..2096491 Flexistipes sinusarabici DSM 4947 10816292 YP_004604169.1 CDS Flexsi_1972 NC_015672.1 2096493 2097860 D PFAM: FAD dependent oxidoreductase; KEGG: cni:Calni_0426 hypothetical protein; SPTR: Putative uncharacterized protein; FAD dependent oxidoreductase 2096493..2097860 Flexistipes sinusarabici DSM 4947 10816293 YP_004604170.1 CDS Flexsi_1973 NC_015672.1 2097865 2098269 R InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein complement(2097865..2098269) Flexistipes sinusarabici DSM 4947 10816294 YP_004604171.1 CDS Flexsi_1974 NC_015672.1 2098485 2099804 D PFAM: Transposase DDE domain; COGs: COG1158 Transcription termination factor; InterProIPR004665:IPR011129:IPR003593:IPR011112:IPR 011113:IPR000194; KEGG: ddf:DEFDS_0096 transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; transposase IS4 family protein 2098485..2099804 Flexistipes sinusarabici DSM 4947 10816295 YP_004604172.1 CDS Flexsi_1975 NC_015672.1 2100311 2101552 D PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; InterPro IPR015414; KEGG: dol:Dole_2781 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein; transcription termination factor Rho 2100311..2101552 Flexistipes sinusarabici DSM 4947 10816296 YP_004604173.1 CDS Flexsi_1976 NC_015672.1 2101915 2102559 D PFAM: SNARE associated Golgi protein; KEGG: drt:Dret_2127 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2101915..2102559 Flexistipes sinusarabici DSM 4947 10816297 YP_004604174.1 CDS Flexsi_1977 NC_015672.1 2102580 2104841 D COGs: COG1687 branched-chain amino acid permease (azaleucine resistance); InterPro IPR008407; KEGG: sdl:Sdel_1541 branched-chain amino acid transport; PFAM: Branched-chain amino acid transport; SPTR: Branched-chain amino acid transport; hypothetical protein 2102580..2104841 Flexistipes sinusarabici DSM 4947 10816298 YP_004604175.1 CDS Flexsi_1978 NC_015672.1 2104865 2105185 R PFAM: Branched-chain amino acid transport protein (AzlD); COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: wsu:WS1320 hypothetical protein; PFAM: AzlC-like; SPTR: Putative uncharacterized protein; branched-chain amino acid transport complement(2104865..2105185) Flexistipes sinusarabici DSM 4947 10816299 YP_004604176.1 CDS Flexsi_1979 NC_015672.1 2105178 2105837 R PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; AzlC family protein complement(2105178..2105837) Flexistipes sinusarabici DSM 4947 10816300 YP_004604177.1 CDS Flexsi_1980 NC_015672.1 2106274 2107593 R PFAM: Transposase DDE domain; transposase IS4 family protein complement(2106274..2107593) Flexistipes sinusarabici DSM 4947 10816301 YP_004604178.1 CDS Flexsi_1981 NC_015672.1 2113991 2115058 R PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG1993 conserved hypothetical protein; InterPro IPR003793; KEGG: ddf:DEFDS_0610 hypothetical protein; PFAM: Protein of unknown function DUF190; SPTR: Putative uncharacterized protein; chorismate synthase complement(2113991..2115058) Flexistipes sinusarabici DSM 4947 10816307 YP_004604179.1 CDS Flexsi_1982 NC_015672.1 2115070 2115399 R PFAM: Uncharacterized ACR, COG1993; COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; HAMAP: CrcB-like protein; InterPro IPR003691; KEGG: dap:Dacet_1834 CrcB protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein CrcB homolog; TIGRFAM: Camphor resistance CrcB protein; hypothetical protein complement(2115070..2115399) Flexistipes sinusarabici DSM 4947 10816308 YP_004604180.1 CDS Flexsi_1983 NC_015672.1 2115396 2115776 R PFAM: CrcB-like protein; TIGRFAM: crcB protein; KEGG: ddf:DEFDS_0608 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; CrcB-like protein complement(2115396..2115776) Flexistipes sinusarabici DSM 4947 10816309 YP_004604181.1 CDS Flexsi_1984 NC_015672.1 2115812 2116066 D COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR014187:IPR013154; KEGG: ddf:DEFDS_1932 alcohol dehydrogenase zinc-binding; PFAM: Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-binding; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2; hypothetical protein 2115812..2116066 Flexistipes sinusarabici DSM 4947 10816310 YP_004604182.1 CDS Flexsi_1985 NC_015672.1 2116222 2117250 R PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: dba:Dbac_1690 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: AMP-dependent synthetase and ligase; zinc-binding alcohol dehydrogenase family protein complement(2116222..2117250) Flexistipes sinusarabici DSM 4947 10816311 YP_004604183.1 CDS Flexsi_1986 NC_015672.1 2117413 2119314 R PFAM: AMP-binding enzyme; COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase; InterPro IPR014816; KEGG: cni:Calni_0752 tRNA (adenine-58-n(1)-) methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; PRIAM: tRNA (adenine-N(1)-)-methyltransferase; SPTR: tRNA (Adenine-58-N(1)-) methyltransferase; long-chain-fatty-acid--CoA ligase complement(2117413..2119314) Flexistipes sinusarabici DSM 4947 10816312 YP_004604184.1 CDS Flexsi_1987 NC_015672.1 2119523 2120302 D PFAM: tRNA methyltransferase complex GCD14 subunit; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; tRNA (adenine-N(1)-)-methyltransferase 2119523..2120302 Flexistipes sinusarabici DSM 4947 10816313 YP_004604185.1 CDS Flexsi_1988 NC_015672.1 2120660 2121673 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; InterPro IPR009875; PFAM: Type IV pilus assembly PilZ; transposase IS116/IS110/IS902 family protein complement(2120660..2121673) Flexistipes sinusarabici DSM 4947 10816314 YP_004604186.1 CDS Flexsi_1989 NC_015672.1 2122572 2123243 D PFAM: PilZ domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: dau:Daud_1728 putative PAS/PAC sensor protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Putative PAS/PAC sensor protein; type IV pilus assembly PilZ 2122572..2123243 Flexistipes sinusarabici DSM 4947 10816315 YP_004604187.1 CDS Flexsi_1990 NC_015672.1 2123233 2124573 R PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; InterPro IPR010177; KEGG: ddf:DEFDS_0760 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; metal dependent phosphohydrolase complement(2123233..2124573) Flexistipes sinusarabici DSM 4947 10816316 YP_004604188.1 CDS Flexsi_1991 NC_015672.1 2124892 2126526 R PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; cytochrome C family protein complement(2124892..2126526) Flexistipes sinusarabici DSM 4947 10816317 YP_004604189.1 CDS Flexsi_1992 NC_015672.1 2127080 2127181 R InterPro IPR001258; KEGG: ddf:DEFDS_0759 hypothetical protein; PFAM: NHL repeat; SPTR: Putative uncharacterized protein; hypothetical protein complement(2127080..2127181) Flexistipes sinusarabici DSM 4947 10816318 YP_004604190.1 CDS Flexsi_1993 NC_015672.1 2127302 2128279 R PFAM: NHL repeat; KEGG: ddf:DEFDS_0758 hypothetical protein; SPTR: Putative uncharacterized protein; NHL repeat containing protein complement(2127302..2128279) Flexistipes sinusarabici DSM 4947 10816319 YP_004604191.1 CDS Flexsi_1994 NC_015672.1 2128233 2129198 R KEGG: ddf:DEFDS_0757 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2128233..2129198) Flexistipes sinusarabici DSM 4947 10816320 YP_004604192.1 CDS Flexsi_1995 NC_015672.1 2129137 2131572 R KEGG: ddf:DEFDS_0756 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein complement(2129137..2131572) Flexistipes sinusarabici DSM 4947 10816321 YP_004604193.1 CDS Flexsi_1996 NC_015672.1 2131569 2132066 R PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; KEGG: ddf:DEFDS_0755 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; multiheme C-type cytochrome complement(2131569..2132066) Flexistipes sinusarabici DSM 4947 10816322 YP_004604194.1 CDS Flexsi_1997 NC_015672.1 2133042 2133749 R InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; multiheme C-type cytochrome complement(2133042..2133749) Flexistipes sinusarabici DSM 4947 10816323 YP_004604195.1 CDS Flexsi_1998 NC_015672.1 2134004 2135371 D PFAM: Transposase domain (DUF772); KEGG: ddf:DEFDS_0754 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; transposase IS4 family protein 2134004..2135371 Flexistipes sinusarabici DSM 4947 10816324 YP_004604196.1 CDS Flexsi_1999 NC_015672.1 2135430 2136011 R COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: ddf:DEFDS_0752 two-component system, NtrC family, response regulator AtoC; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, response regulator AtoC; multiheme C-type cytochrome complement(2135430..2136011) Flexistipes sinusarabici DSM 4947 10816325 YP_004604197.1 CDS Flexsi_2000 NC_015672.1 2136863 2138179 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ddf:DEFDS_0751 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative uncharacterized protein; Fis family two component sigma-54 specific transcriptional regulator complement(2136863..2138179) Flexistipes sinusarabici DSM 4947 10816326 YP_004604198.1 CDS Flexsi_2001 NC_015672.1 2138169 2139521 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; InterPro IPR001258; KEGG: ddf:DEFDS_0750 hypothetical protein; PFAM: NHL repeat; SPTR: Putative uncharacterized protein; integral membrane sensor signal transduction histidine kinase complement(2138169..2139521) Flexistipes sinusarabici DSM 4947 10816327 YP_004604199.1 CDS Flexsi_2002 NC_015672.1 2139529 2140623 R PFAM: NHL repeat; InterPro IPR010177; KEGG: ddf:DEFDS_0749 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; NHL repeat containing protein complement(2139529..2140623) Flexistipes sinusarabici DSM 4947 10816328 YP_004604200.1 CDS Flexsi_2003 NC_015672.1 2140635 2141582 R PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; KEGG: ddf:DEFDS_0748 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome C family protein complement(2140635..2141582) Flexistipes sinusarabici DSM 4947 10816329 YP_004604201.1 CDS Flexsi_2004 NC_015672.1 2141536 2142483 R InterPro IPR010177; KEGG: ddf:DEFDS_0747 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; hypothetical protein complement(2141536..2142483) Flexistipes sinusarabici DSM 4947 10816330 YP_004604202.1 CDS Flexsi_2005 NC_015672.1 2142535 2143845 R PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; InterPro IPR010177; KEGG: ddf:DEFDS_0746 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; cytochrome C family protein complement(2142535..2143845) Flexistipes sinusarabici DSM 4947 10816331 YP_004604203.1 CDS Flexsi_2006 NC_015672.1 2144521 2147568 R PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; InterPro IPR001258; KEGG: ddf:DEFDS_0745 hypothetical protein; PFAM: NHL repeat; SPTR: Putative uncharacterized protein; cytochrome C family protein complement(2144521..2147568) Flexistipes sinusarabici DSM 4947 10816332 YP_004604204.1 CDS Flexsi_2007 NC_015672.1 2147565 2148449 R PFAM: NHL repeat; KEGG: ddf:DEFDS_0744 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; NHL repeat containing protein complement(2147565..2148449) Flexistipes sinusarabici DSM 4947 10816333 YP_004604205.1 CDS Flexsi_2008 NC_015672.1 2148689 2149549 R KEGG: ddf:DEFDS_0743 hypothetical protein; SPTR: Putative uncharacterized protein; multiheme C-type cytochrome complement(2148689..2149549) Flexistipes sinusarabici DSM 4947 10816334 YP_004604206.1 CDS Flexsi_2009 NC_015672.1 2149553 2150455 R PFAM: Cytochrome b(N-terminal)/b6/petB; KEGG: ddf:DEFDS_0742 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein complement(2149553..2150455) Flexistipes sinusarabici DSM 4947 10816335 YP_004604207.1 CDS Flexsi_2010 NC_015672.1 2150457 2151494 R KEGG: ddf:DEFDS_0741 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; multiheme C-type cytochrome complement(2150457..2151494) Flexistipes sinusarabici DSM 4947 10816336 YP_004604208.1 CDS Flexsi_2011 NC_015672.1 2151510 2152511 R COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR001789; KEGG: ddf:DEFDS_0740 signal transduction response regulator; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PRIAM: Diguanylate kinase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Signal transduction response regulator; TIGRFAM: Diguanylate cyclase, predicted; multiheme C-type cytochrome complement(2151510..2152511) Flexistipes sinusarabici DSM 4947 10816337 YP_004604209.1 CDS Flexsi_2012 NC_015672.1 2153450 2154367 R PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR000866; KEGG: ddf:DEFDS_1942 thioredoxin family protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin family protein; response regulator receiver modulated diguanylate cyclase complement(2153450..2154367) Flexistipes sinusarabici DSM 4947 10816338 YP_004604210.1 CDS Flexsi_2013 NC_015672.1 2154561 2155085 R PFAM: AhpC/TSA family; COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR016484:IPR005225:IPR002917; KEGG: ddf:DEFDS_1072 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; alkyl hydroperoxide reductase complement(2154561..2155085) Flexistipes sinusarabici DSM 4947 10816339 YP_004604211.1 CDS Flexsi_2014 NC_015672.1 2155232 2156566 R PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR004527:IPR020058; KEGG: ddf:DEFDS_1071 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; GTP-binding protein engA complement(2155232..2156566) Flexistipes sinusarabici DSM 4947 10816340 YP_004604212.1 CDS Flexsi_2015 NC_015672.1 2156570 2158024 R PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR001789; KEGG: cni:Calni_2046 response regulator receiver modulated diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; glutamyl-tRNA synthetase complement(2156570..2158024) Flexistipes sinusarabici DSM 4947 10816341 YP_004604213.1 CDS Flexsi_2016 NC_015672.1 2158090 2159406 D PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: cni:Calni_0977 anthranilate synthase, component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase, component I; response regulator receiver modulated diguanylate cyclase 2158090..2159406 Flexistipes sinusarabici DSM 4947 10816342 YP_004604214.1 CDS Flexsi_2017 NC_015672.1 2159630 2161099 D PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006221:IPR000991; KEGG: ddf:DEFDS_0439 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; anthranilate synthase 2159630..2161099 Flexistipes sinusarabici DSM 4947 10816343 YP_004604215.1 CDS Flexsi_2018 NC_015672.1 2161083 2161658 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: cni:Calni_0979 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase; glutamine amidotransferase of anthranilate synthase 2161083..2161658 Flexistipes sinusarabici DSM 4947 10816344 YP_004604216.1 CDS Flexsi_2019 NC_015672.1 2161651 2162646 D PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: cni:Calni_0980 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol-phosphate synthase; anthranilate phosphoribosyltransferase 2161651..2162646 Flexistipes sinusarabici DSM 4947 10816345 YP_004604217.1 CDS Flexsi_2020 NC_015672.1 2162647 2163393 D PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: ddf:DEFDS_0442 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; indole-3-glycerol-phosphate synthase 2162647..2163393 Flexistipes sinusarabici DSM 4947 10816346 YP_004604218.1 CDS Flexsi_2021 NC_015672.1 2163394 2163936 D PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain; InterPro IPR006654:IPR001926; KEGG: ddf:DEFDS_0443 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain 1; TIGRFAM: Tryptophan synthase, beta chain; N-(5 -phosphoribosyl)anthranilate isomerase 2163394..2163936 Flexistipes sinusarabici DSM 4947 10816347 YP_004604219.1 CDS Flexsi_2022 NC_015672.1 2163977 2165146 D PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028; KEGG: cni:Calni_0983 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit beta 2163977..2165146 Flexistipes sinusarabici DSM 4947 10816348 YP_004604220.1 CDS Flexsi_2023 NC_015672.1 2165143 2165865 D PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; KEGG: ddf:DEFDS_1681 hypothetical protein; SPTR: Putative uncharacterized protein; tryptophan synthase subunit alpha 2165143..2165865 Flexistipes sinusarabici DSM 4947 10816349 YP_004604221.1 CDS Flexsi_2024 NC_015672.1 2166057 2166368 R PFAM: Nitrous oxide-stimulated promoter; KEGG: cni:Calni_0024 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein complement(2166057..2166368) Flexistipes sinusarabici DSM 4947 10816350 YP_004604222.1 CDS Flexsi_2025 NC_015672.1 2166389 2166628 R COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cni:Calni_0023 abc transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; hypothetical protein complement(2166389..2166628) Flexistipes sinusarabici DSM 4947 10816351 YP_004604223.1 CDS Flexsi_2026 NC_015672.1 2166852 2167856 R PFAM: ABC transporter; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495; KEGG: cni:Calni_0022 cobalamin synthesis protein p47k; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; SPTR: Cobalamin synthesis protein P47K; ABC transporter-like protein complement(2166852..2167856) Flexistipes sinusarabici DSM 4947 10816352 YP_004604224.1 CDS Flexsi_2027 NC_015672.1 2167868 2168551 R PFAM: CobW/HypB/UreG, nucleotide-binding domain; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR015077; KEGG: cni:Calni_0021 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: Putative uncharacterized protein; cobalamin synthesis protein P47K complement(2167868..2168551) Flexistipes sinusarabici DSM 4947 10816353 YP_004604225.1 CDS Flexsi_2028 NC_015672.1 2168548 2169777 R PFAM: Domain of unknown function (DUF1858); COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; InterPro IPR002310; KEGG: ddf:DEFDS_0639 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; hypothetical protein complement(2168548..2169777) Flexistipes sinusarabici DSM 4947 10816354 YP_004604226.1 CDS Flexsi_2029 NC_015672.1 2170081 2170956 R PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; COGs: COG0137 Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; InterPro IPR001518; KEGG: cni:Calni_0743 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; glycyl-tRNA synthetase subunit alpha complement(2170081..2170956) Flexistipes sinusarabici DSM 4947 10816355 YP_004604227.1 CDS Flexsi_2030 NC_015672.1 2170989 2172200 R PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: ddf:DEFDS_1806 N-acetyl-L-amino acid amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: N-acetyl-L-amino acid amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; argininosuccinate synthase complement(2170989..2172200) Flexistipes sinusarabici DSM 4947 10816356 YP_004604228.1 CDS Flexsi_2031 NC_015672.1 2172427 2173551 R PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; HAMAP: L-seryl-tRNA(Sec) selenium transferase; InterPro IPR004534:IPR018319; KEGG: ddf:DEFDS_0273 L-seryl-tRNA(Sec) selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; amidohydrolase complement(2172427..2173551) Flexistipes sinusarabici DSM 4947 10816357 YP_004604229.1 CDS Flexsi_2032 NC_015672.1 2174239 2175615 D PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase; COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR005225:IPR004535:IPR000795:IPR004161:IPR 015191; KEGG: ddf:DEFDS_0272 selenocysteine-specific translation elongation factor; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 3; SPTR: Selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; Small GTP-binding protein; L-seryl-tRNA(Sec) selenium transferase 2174239..2175615 Flexistipes sinusarabici DSM 4947 10816358 YP_004604230.1 CDS Flexsi_2033 NC_015672.1 2175591 2177456 D PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; This gene is disrupted by insertion of repetitive element; manually curated; selenocysteine-specific translation elongation factor 2175591..2177456 Flexistipes sinusarabici DSM 4947 10816359 YP_004604231.1 CDS Flexsi_2035 NC_015672.1 2178427 2179746 D PFAM: Transposase DDE domain; InterPro IPR007456; KEGG: dap:Dacet_0848 hypothetical protein; PFAM: Protein of unknown function DUF494; SPTR: Putative uncharacterized protein; transposase IS4 family protein 2178427..2179746 Flexistipes sinusarabici DSM 4947 10816361 YP_004604232.1 CDS Flexsi_2036 NC_015672.1 2180174 2180599 D PFAM: Protein of unknown function (DUF494); COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR006154:IPR003601:IPR003602:IPR 006171:IPR013497:IPR013498; KEGG: ddf:DEFDS_1803 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SPTR: DNA topoisomerase I; TIGRFAM: DNA topoisomerase I, bacterial-type; hypothetical protein 2180174..2180599 Flexistipes sinusarabici DSM 4947 10816362 YP_004604233.1 CDS Flexsi_2037 NC_015672.1 2180651 2183077 D PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation; HAMAP:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferasetrmFO; InterPro IPR004417:IPR002218; KEGG: ddf:DEFDS_1802 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing); SPTR:Methylenetetrahydrofolate--tRNA-(uracil-5-)-me thyltransferaseTrmFO; TIGRFAM:Methylenetetrahydrofolate--tRNA-(uracil-5-) -methyltransferase,TrmFO; DNA topoisomerase I 2180651..2183077 Flexistipes sinusarabici DSM 4947 10816363 YP_004604234.1 CDS Flexsi_2038 NC_015672.1 2183077 2184411 D PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: cni:Calni_1109 integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 2; methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO 2183077..2184411 Flexistipes sinusarabici DSM 4947 10816364 YP_004604235.1 CDS Flexsi_2039 NC_015672.1 2184386 2185282 D PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG0709 Selenophosphate synthase; InterPro IPR004536:IPR000728:IPR010918; KEGG: ddf:DEFDS_0345 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Selenide, water dikinase; TIGRFAM: Selenide water dikinase; Tyrosine recombinase xerC 2184386..2185282 Flexistipes sinusarabici DSM 4947 10816365 YP_004604236.1 CDS Flexsi_2040 NC_015672.1 2185502 2186446 R PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; InterPro IPR019870:IPR001455; KEGG: ddf:DEFDS_0344 hypothetical protein; PFAM: SirA-like; SPTR: Putative uncharacterized protein; TIGRFAM: SirA-related, selenium metabolism; selenide, water dikinase complement(2185502..2186446) Flexistipes sinusarabici DSM 4947 10816366 YP_004604237.1 CDS Flexsi_2041 NC_015672.1 2186532 2187116 R PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_0343 aminotransferase I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, I and II; selenium metabolism protein YedF complement(2186532..2187116) Flexistipes sinusarabici DSM 4947 10816367 YP_004604238.1 CDS Flexsi_2042 NC_015672.1 2187210 2188517 R PFAM: Aminotransferase class I and II; COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: ddf:DEFDS_1472 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: Cyclopropane-fatty-acyl-phospholipid synthase; class I and II aminotransferase complement(2187210..2188517) Flexistipes sinusarabici DSM 4947 10816368 YP_004604239.1 CDS Flexsi_2043 NC_015672.1 2188666 2189781 R PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: chu:CHU_0540 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family bacterial regulatory protein; cyclopropane-fatty-acyl-phospholipid synthase complement(2188666..2189781) Flexistipes sinusarabici DSM 4947 10816369 YP_004604240.1 CDS Flexsi_2044 NC_015672.1 2189980 2190330 D PFAM: Bacterial regulatory protein, arsR family; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: chu:CHU_1514 arsenite S-adenosylmethyltransferase; PFAM: Methyltransferase type 11; SPTR: Protein containing Methyltransferase type 11 domain; ArsR family transcriptional regulator 2189980..2190330 Flexistipes sinusarabici DSM 4947 10816370 YP_004604241.1 CDS Flexsi_2045 NC_015672.1 2190315 2191076 D PFAM: Methyltransferase domain; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; type 11 methyltransferase 2190315..2191076 Flexistipes sinusarabici DSM 4947 10816371 YP_004604242.1 CDS Flexsi_2046 NC_015672.1 2191414 2192781 R PFAM: Transposase domain (DUF772); COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: cni:Calni_0116 SNARE associated golgi protein-related protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-related protein; transposase IS4 family protein complement(2191414..2192781) Flexistipes sinusarabici DSM 4947 10816372 YP_004604243.1 CDS Flexsi_2047 NC_015672.1 2193016 2193711 R PFAM: SNARE associated Golgi protein; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: dap:Dacet_1398 pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region; hypothetical protein complement(2193016..2193711) Flexistipes sinusarabici DSM 4947 10816373 YP_004604244.1 CDS Flexsi_2048 NC_015672.1 2193824 2195230 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: gfo:GFO_3609 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein; dihydrolipoyl dehydrogenase complement(2193824..2195230) Flexistipes sinusarabici DSM 4947 10816374 YP_004604245.1 CDS Flexsi_2049 NC_015672.1 2195217 2195867 R PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: noc:Noc_0586 UbiE/COQ5 methyltransferase; PFAM: Methyltransferase type 11; PRIAM: Arsenite methyltransferase; SPTR: UbiE/COQ5 methyltransferase; manually curated; hypothetical protein complement(2195217..2195867) Flexistipes sinusarabici DSM 4947 10816375 YP_004604246.1 CDS Flexsi_2050 NC_015672.1 2195855 2196913 R PFAM: Methyltransferase domain; manually curated; arsenite methyltransferase complement(2195855..2196913) Flexistipes sinusarabici DSM 4947 10816376 YP_004604247.1 CDS Flexsi_2052 NC_015672.1 2197833 2198528 R PFAM: Glycosyl transferase family 2; InterPro IPR010181; KEGG: dap:Dacet_1415 C_GCAxxG_C_C family protein; PFAM: CGCAxxGCC motif; SPTR: C_GCAxxG_C_C family protein; TIGRFAM: CGCAxxGCC motif; family 2 glycosyl transferase complement(2197833..2198528) Flexistipes sinusarabici DSM 4947 10816378 YP_004604248.1 CDS Flexsi_2053 NC_015672.1 2198586 2199029 D PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR000014:IPR003593:IPR013767:IPR002078; KEGG: cni:Calni_1353 sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; SMART: ATPase, AAA+ type, core; PAS; SPTR: Putative sigma54 specific transcriptional regulator; TIGRFAM: PAS; C_GCAxxG_C_C family protein 2198586..2199029 Flexistipes sinusarabici DSM 4947 10816379 YP_004604249.1 CDS Flexsi_2054 NC_015672.1 2199564 2200886 D PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: cni:Calni_1350 extracellular solute-binding protein, family 7; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; putative sigma-54 specific transcriptional regulator 2199564..2200886 Flexistipes sinusarabici DSM 4947 10816380 YP_004604250.1 CDS Flexsi_2055 NC_015672.1 2201108 2202184 D PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: cni:Calni_1351 tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; family 7 extracellular solute-binding protein 2201108..2202184 Flexistipes sinusarabici DSM 4947 10816381 YP_004604251.1 CDS Flexsi_2056 NC_015672.1 2202250 2202759 D PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR004681:IPR010656; KEGG: cni:Calni_1352 trap dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 2202250..2202759 Flexistipes sinusarabici DSM 4947 10816382 YP_004604252.1 CDS Flexsi_2057 NC_015672.1 2202749 2204071 D PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: cni:Calni_1354 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; TRAP dicarboxylate transporter subunit DctM 2202749..2204071 Flexistipes sinusarabici DSM 4947 10816383 YP_004604253.1 CDS Flexsi_2058 NC_015672.1 2204087 2205262 D PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR012792:IPR012791:IPR004165; KEGG: cni:Calni_1355 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase, subunit A; acetyl-CoA acetyltransferase 2204087..2205262 Flexistipes sinusarabici DSM 4947 10816384 YP_004604254.1 CDS Flexsi_2059 NC_015672.1 2205283 2206650 D PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, A subunit; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011294:IPR002198; KEGG: cni:Calni_1356 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-hydroxybutyrate dehydrogenase; SPTR: 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; 3-oxoacid CoA-transferase subunit B 2205283..2206650 Flexistipes sinusarabici DSM 4947 10816385 YP_004604255.1 CDS Flexsi_2060 NC_015672.1 2206653 2207411 D PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR001450; KEGG: dap:Dacet_0227 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; 3-hydroxybutyrate dehydrogenase 2206653..2207411 Flexistipes sinusarabici DSM 4947 10816386 YP_004604256.1 CDS Flexsi_2061 NC_015672.1 2207654 2208937 R PFAM: 4Fe-4S binding domain; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: cni:Calni_0511 DegT/DnrJ/eryc1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; 4Fe-4S ferredoxin complement(2207654..2208937) Flexistipes sinusarabici DSM 4947 10816387 YP_004604257.1 CDS Flexsi_2062 NC_015672.1 2209137 2210234 D PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: ddf:DEFDS_0135 hypothetical protein; PFAM: Protein of unknown function DUF374; SPTR: Putative uncharacterized protein; glutamine--scyllo-inositol transaminase 2209137..2210234 Flexistipes sinusarabici DSM 4947 10816388 YP_004604258.1 CDS Flexsi_2063 NC_015672.1 2210237 2210869 D PFAM: Domain of unknown function (DUF374); COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: cni:Calni_0509 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; hypothetical protein 2210237..2210869 Flexistipes sinusarabici DSM 4947 10816389 YP_004604259.1 CDS Flexsi_2064 NC_015672.1 2210844 2212091 D PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: ddf:DEFDS_0137 lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl acyltransferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 2210844..2212091 Flexistipes sinusarabici DSM 4947 10816390 YP_004604260.1 CDS Flexsi_2065 NC_015672.1 2212063 2212950 D PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR006543:IPR006549:IPR005834; KEGG: cni:Calni_0507 histidinol-phosphate phosphatase family protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Histidinol-phosphate phosphatase family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; Histidinol-phosphate phosphatase; lipid A biosynthesis acyltransferase 2212063..2212950 Flexistipes sinusarabici DSM 4947 10816391 YP_004604261.1 CDS Flexsi_2066 NC_015672.1 2212916 2213509 D PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; COGs: COG0078 Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; InterPro IPR002292:IPR006132:IPR006131; KEGG: ddf:DEFDS_1628 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: Ornithine carbamoyltransferase; HAD-superfamily hydrolase 2212916..2213509 Flexistipes sinusarabici DSM 4947 10816392 YP_004604262.1 CDS Flexsi_2067 NC_015672.1 2213506 2214420 R PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR004636:IPR005814; KEGG: ddf:DEFDS_1629 acetylornithine transaminase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine transaminase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; ornithine carbamoyltransferase complement(2213506..2214420) Flexistipes sinusarabici DSM 4947 10816393 YP_004604263.1 CDS Flexsi_2068 NC_015672.1 2214421 2215587 R PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; InterPro IPR001450; KEGG: cni:Calni_1000 hypothetical protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; acetylornithine/succinyldiaminopimelate aminotransferase complement(2214421..2215587) Flexistipes sinusarabici DSM 4947 10816394 YP_004604264.1 CDS Flexsi_2069 NC_015672.1 2215683 2216981 D PFAM: 4Fe-4S binding domain; KEGG: cni:Calni_1001 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin 2215683..2216981 Flexistipes sinusarabici DSM 4947 10816395 YP_004604265.1 CDS Flexsi_2070 NC_015672.1 2216978 2217394 D COGs: COG2078 conserved hypothetical protein; HAMAP: AMMECR1-domain protein; InterPro IPR002733; KEGG: ddf:DEFDS_0690 hypothetical protein; PFAM: AMMECR1; SPTR: Putative uncharacterized protein; TIGRFAM: AMMECR1; hypothetical protein 2216978..2217394 Flexistipes sinusarabici DSM 4947 10816396 YP_004604266.1 CDS Flexsi_2071 NC_015672.1 2217416 2217982 R PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family; KEGG: dps:DP2152 hypothetical protein; SPTR: Putative uncharacterized protein; AMMECR1-domain-containing protein complement(2217416..2217982) Flexistipes sinusarabici DSM 4947 10816397 YP_004604267.1 CDS Flexsi_2072 NC_015672.1 2218538 2218852 R PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulfoxide reductase msrB; Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569:IPR002579; KEGG: dat:HRM2_08740 MsrAB; PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (S)-S-oxide reductase., Peptide-methionine (R)-S-oxide reductase; SPTR: MsrAB; TIGRFAM: Methionine sulphoxide reductase B; Peptide methionine sulphoxide reductase MsrA; manually curated; hypothetical protein complement(2218538..2218852) Flexistipes sinusarabici DSM 4947 10816398 YP_004604268.1 CDS Flexsi_2073 NC_015672.1 2218883 2219893 R PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; peptide methionine sulfoxide reductase msrB complement(2218883..2219893) Flexistipes sinusarabici DSM 4947 10816399 YP_004604269.1 CDS Flexsi_2074 NC_015672.1 2220091 2221410 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(2220091..2221410) Flexistipes sinusarabici DSM 4947 10816400 YP_004604270.1 CDS Flexsi_2076 NC_015672.1 2222440 2222682 R COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: cni:Calni_0548 intracellular protease, PfpI family; PFAM: ThiJ/PfpI; SPTR: Intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; hypothetical protein complement(2222440..2222682) Flexistipes sinusarabici DSM 4947 10816402 YP_004604271.1 CDS Flexsi_2077 NC_015672.1 2222841 2223428 R PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; InterPro IPR002645; KEGG: dap:Dacet_2858 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; Pfpi family intracellular protease complement(2222841..2223428) Flexistipes sinusarabici DSM 4947 10816403 YP_004604272.1 CDS Flexsi_2078 NC_015672.1 2224310 2224606 D PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645; KEGG: cni:Calni_0942 pbs lyase heat domain protein repeat-containing protein; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: PBS lyase HEAT domain protein repeat-containing protein; sulfate transporter/antisigma-factor antagonist STAS 2224310..2224606 Flexistipes sinusarabici DSM 4947 10816404 YP_004604273.1 CDS Flexsi_2079 NC_015672.1 2224610 2226031 D PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; InterPro IPR004491:IPR003593:IPR013093; KEGG: ddf:DEFDS_2156 ATP-dependent protease HslVU, ATPase subunit HslU; PFAM: ATPase associated with various cellular activities, AAA-2; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: Heat shock protein HslU; sulfate transporter/antisigma-factor antagonist STAS 2224610..2226031 Flexistipes sinusarabici DSM 4947 10816405 YP_004604274.1 CDS Flexsi_2080 NC_015672.1 2226221 2227543 R PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease hslV; InterPro IPR001353; KEGG: ddf:DEFDS_2155 ATP-dependent protease HslVU, peptidase subunit HslV; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent protease subunit HslV; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent hsl protease ATP-binding subunit hslU complement(2226221..2227543) Flexistipes sinusarabici DSM 4947 10816406 YP_004604275.1 CDS Flexsi_2081 NC_015672.1 2227557 2228084 R PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; ATP-dependent protease hslV complement(2227557..2228084) Flexistipes sinusarabici DSM 4947 10816407 YP_004604276.1 CDS Flexsi_2082 NC_015672.1 2228361 2229680 R PFAM: Transposase DDE domain; COGs: COG1067 ATP-dependent protease; InterPro IPR008269; KEGG: rxy:Rxyl_1929 ATP-dependent protease; PFAM: Peptidase S16, lon C-terminal; SPTR: ATP-dependent protease, putative; transposase IS4 family protein complement(2228361..2229680) Flexistipes sinusarabici DSM 4947 10816408 YP_004604277.1 CDS Flexsi_2083 NC_015672.1 2230024 2232438 D PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; COGs: COG0326 Molecular chaperone HSP90 family; HAMAP: Chaperone protein htpG; InterPro IPR001404:IPR003594:IPR020576; KEGG: cni:Calni_0147 heat shock protein HSP90; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SPTR: Chaperone protein htpG; peptidase S16 lon domain-containing protein 2230024..2232438 Flexistipes sinusarabici DSM 4947 10816409 YP_004604278.1 CDS Flexsi_2084 NC_015672.1 2232484 2234364 R PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506:IPR018318; KEGG: ddf:DEFDS_1156 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; chaperone protein htpG complement(2232484..2234364) Flexistipes sinusarabici DSM 4947 10816410 YP_004604279.1 CDS Flexsi_2085 NC_015672.1 2234842 2235876 R PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; tRNA-specific 2-thiouridylase mnmA complement(2234842..2235876) Flexistipes sinusarabici DSM 4947 10816411 YP_004604280.1 CDS Flexsi_2086 NC_015672.1 2236153 2237472 R PFAM: Transposase DDE domain; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: ddf:DEFDS_1153 hypothetical protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(2236153..2237472) Flexistipes sinusarabici DSM 4947 10816412 YP_004604281.1 CDS Flexsi_2087 NC_015672.1 2237589 2238710 D PFAM: NOL1/NOP2/sun family; InterPro IPR013216; KEGG: cni:Calni_1990 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; Fmu (Sun) domain-containing protein 2237589..2238710 Flexistipes sinusarabici DSM 4947 10816413 YP_004604282.1 CDS Flexsi_2088 NC_015672.1 2238697 2239389 R PFAM: Methyltransferase domain; manually curated; type 11 methyltransferase complement(2238697..2239389) Flexistipes sinusarabici DSM 4947 10816414 YP_004604283.1 CDS Flexsi_2090 NC_015672.1 2240438 2240698 R PFAM: General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: ddf:DEFDS_1437 Sir2 family transcriptional regulator; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Transcriptional regulator, Sir2 family; competence protein ComEA complement(2240438..2240698) Flexistipes sinusarabici DSM 4947 10816416 YP_004604284.1 CDS Flexsi_2091 NC_015672.1 2241055 2241885 D PFAM: Sir2 family; KEGG: dap:Dacet_2751 hypothetical protein; SPTR: Putative uncharacterized protein; silent information regulator protein Sir2 2241055..2241885 Flexistipes sinusarabici DSM 4947 10816417 YP_004604285.1 CDS Flexsi_2092 NC_015672.1 2241878 2242804 D PFAM: Protein of unknown function (DUF2860); InterPro IPR013429; KEGG: ddf:DEFDS_1611 hypothetical protein; PFAM: Regulatory protein, FmdB, putative; SPTR: Putative uncharacterized protein; TIGRFAM: Regulatory protein, FmdB, putative; hypothetical protein 2241878..2242804 Flexistipes sinusarabici DSM 4947 10816418 YP_004604286.1 CDS Flexsi_2093 NC_015672.1 2243405 2243689 R PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR001450; KEGG: toc:Toce_2222 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FmdB family regulatory protein complement(2243405..2243689) Flexistipes sinusarabici DSM 4947 10816419 YP_004604287.1 CDS Flexsi_2094 NC_015672.1 2244123 2245247 D PFAM: 4Fe-4S binding domain; InterPro IPR010181; KEGG: mpd:MCP_2169 hypothetical protein; PFAM: CGCAxxGCC motif; SPTR: Putative uncharacterized protein; TIGRFAM: CGCAxxGCC motif; 4Fe-4S ferredoxin 2244123..2245247 Flexistipes sinusarabici DSM 4947 10816420 YP_004604288.1 CDS Flexsi_2095 NC_015672.1 2245255 2245704 R PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; C_GCAxxG_C_C family protein complement(2245255..2245704) Flexistipes sinusarabici DSM 4947 10816421 YP_004604289.1 CDS Flexsi_2096 NC_015672.1 2251861 2252835 R PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; HAMAP: Methylthioribose-1-phosphate isomerase; InterPro IPR005251:IPR011559:IPR000649; KEGG: ddf:DEFDS_0061 translation initiation factor IF-2B; PFAM: Initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Translation initiation factor IF-2B; TIGRFAM: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; fructose-1,6-bisphosphate aldolase complement(2251861..2252835) Flexistipes sinusarabici DSM 4947 10816427 YP_004604290.1 CDS Flexsi_2097 NC_015672.1 2252838 2253818 R PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: ddf:DEFDS_0060 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; methylthioribose-1-phosphate isomerase complement(2252838..2253818) Flexistipes sinusarabici DSM 4947 10816428 YP_004604291.1 CDS Flexsi_2098 NC_015672.1 2253827 2254369 R PFAM: NADPH-dependent FMN reductase; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: cni:Calni_0431 peptidase M24; PFAM: Peptidase M24, structural domain; SPTR: Peptidase M24; NADPH-dependent FMN reductase complement(2253827..2254369) Flexistipes sinusarabici DSM 4947 10816429 YP_004604292.1 CDS Flexsi_2099 NC_015672.1 2254386 2255579 R PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: dap:Dacet_0446 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; peptidase M24 complement(2254386..2255579) Flexistipes sinusarabici DSM 4947 10816430 YP_004604293.1 CDS Flexsi_2100 NC_015672.1 2255576 2256508 R PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005268:IPR005269; KEGG: ddf:DEFDS_0259 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00725; RpoD subfamily RNA polymerase sigma-70 subunit complement(2255576..2256508) Flexistipes sinusarabici DSM 4947 10816431 YP_004604294.1 CDS Flexsi_2101 NC_015672.1 2256505 2256963 R PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cni:Calni_0623 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; hypothetical protein complement(2256505..2256963) Flexistipes sinusarabici DSM 4947 10816432 YP_004604295.1 CDS Flexsi_2102 NC_015672.1 2257080 2257850 R PFAM: Glycosyl transferase family 2; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: dap:Dacet_2404 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; family 2 glycosyl transferase complement(2257080..2257850) Flexistipes sinusarabici DSM 4947 10816433 YP_004604296.1 CDS Flexsi_2103 NC_015672.1 2257859 2258314 R PFAM: AsnC family; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651; KEGG: cni:Calni_0621 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: DNA-(Apurinic or apyrimidinic site) lyase; AsnC family transcriptional regulator complement(2257859..2258314) Flexistipes sinusarabici DSM 4947 10816434 YP_004604297.1 CDS Flexsi_2104 NC_015672.1 2258295 2258978 R PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; KEGG: ddf:DEFDS_1866 hypothetical protein; SPTR: Putative uncharacterized protein; DNA-(apurinic or apyrimidinic site) lyase complement(2258295..2258978) Flexistipes sinusarabici DSM 4947 10816435 YP_004604298.1 CDS Flexsi_2105 NC_015672.1 2258984 2259229 R COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ddf:DEFDS_2167 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; hypothetical protein complement(2258984..2259229) Flexistipes sinusarabici DSM 4947 10816436 YP_004604299.1 CDS Flexsi_2106 NC_015672.1 2259245 2260405 R PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cni:Calni_0618 transcriptional regulator, badm/rrf2 family; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; cysteine desulfurase complement(2259245..2260405) Flexistipes sinusarabici DSM 4947 10816437 YP_004604300.1 CDS Flexsi_2107 NC_015672.1 2260412 2260816 R PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1045 Serine acetyltransferase; InterPro IPR005881:IPR001451; KEGG: ddf:DEFDS_2169 serine O-acetyltransferase; PRIAM: Serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase; BadM/Rrf2 family transcriptional regulator complement(2260412..2260816) Flexistipes sinusarabici DSM 4947 10816438 YP_004604301.1 CDS Flexsi_2108 NC_015672.1 2260800 2261462 R PFAM: Serine acetyltransferase, N-terminal; TIGRFAM: serine O-acetyltransferase; InterPro IPR001450; KEGG: ddf:DEFDS_2170 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin; serine O-acetyltransferase complement(2260800..2261462) Flexistipes sinusarabici DSM 4947 10816439 YP_004604302.1 CDS Flexsi_2109 NC_015672.1 2261532 2261702 R PFAM: 4Fe-4S binding domain; KEGG: ddf:DEFDS_2171 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin complement(2261532..2261702) Flexistipes sinusarabici DSM 4947 10816440 YP_004604303.1 CDS Flexsi_2110 NC_015672.1 2261863 2262210 D InterPro IPR000086; KEGG: ddf:DEFDS_2172 phosphohydrolase MutT/NUDIX family; PFAM: NUDIX hydrolase domain; SPTR: Phosphohydrolase, MutT/NUDIX family; hypothetical protein 2261863..2262210 Flexistipes sinusarabici DSM 4947 10816441 YP_004604304.1 CDS Flexsi_2111 NC_015672.1 2262210 2262749 D PFAM: NUDIX domain; COGs: COG2021 Homoserine acetyltransferase; HAMAP: Homoserine O-acetyltransferase; InterPro IPR006296:IPR000073; KEGG: ddf:DEFDS_1867 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; PRIAM: Homoserine O-acetyltransferase; SPTR: Homoserine O-acetyltransferase; TIGRFAM: Homoserine O-acetyltransferase; NUDIX hydrolase 2262210..2262749 Flexistipes sinusarabici DSM 4947 10816442 YP_004604305.1 CDS Flexsi_2112 NC_015672.1 2263078 2264190 D PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; InterPro IPR013216; KEGG: ddf:DEFDS_1868 methyltransferase UbiE/COQ5 family; PFAM: Methyltransferase type 11; SPTR: Methyltransferase, UbiE/COQ5 family; homoserine O-acetyltransferase 2263078..2264190 Flexistipes sinusarabici DSM 4947 10816443 YP_004604306.1 CDS Flexsi_2113 NC_015672.1 2264203 2264916 D PFAM: Methyltransferase domain; COGs: COG4619 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_1869 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; type 11 methyltransferase 2264203..2264916 Flexistipes sinusarabici DSM 4947 10816444 YP_004604307.1 CDS Flexsi_2114 NC_015672.1 2264913 2265602 D PFAM: ABC transporter; COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: ddf:DEFDS_1870 ABC transporter permease; PFAM: Conserved hypothetical protein CHP00245; SPTR: ABC transporter, permease; TIGRFAM: Conserved hypothetical protein CHP00245; xenobiotic-transporting ATPase 2264913..2265602 Flexistipes sinusarabici DSM 4947 10816445 YP_004604308.1 CDS Flexsi_2115 NC_015672.1 2265603 2266394 D PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644; KEGG: ddf:DEFDS_1871 chloride channel protein, CIC family; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Chloride channel protein, CIC family; hypothetical protein 2265603..2266394 Flexistipes sinusarabici DSM 4947 10816446 YP_004604309.1 CDS Flexsi_2116 NC_015672.1 2266387 2268174 D PFAM: CBS domain; Voltage gated chloride channel; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; Cl- channel voltage-gated family protein 2266387..2268174 Flexistipes sinusarabici DSM 4947 10816447 YP_004604310.1 CDS Flexsi_2117 NC_015672.1 2268452 2269771 R PFAM: Transposase DDE domain; COGs: COG0628 permease; InterPro IPR002549; KEGG: ddf:DEFDS_2005 transporter; PFAM: Uncharacterised protein family UPF0118; SPTR: Transporter; transposase IS4 family protein complement(2268452..2269771) Flexistipes sinusarabici DSM 4947 10816448 YP_004604311.1 CDS Flexsi_2118 NC_015672.1 2270008 2271066 R PFAM: Domain of unknown function DUF20; COGs: COG0176 Transaldolase; HAMAP: transaldolase; InterPro IPR004731:IPR001585; KEGG: ddf:DEFDS_0352 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase C; hypothetical protein complement(2270008..2271066) Flexistipes sinusarabici DSM 4947 10816449 YP_004604312.1 CDS Flexsi_2119 NC_015672.1 2271070 2271714 R PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; InterPro IPR011017:IPR007029; KEGG: ddf:DEFDS_0351 hypothetical protein; PFAM: YHS; SMART: TRASH; SPTR: Putative uncharacterized protein; transaldolase complement(2271070..2271714) Flexistipes sinusarabici DSM 4947 10816450 YP_004604313.1 CDS Flexsi_2120 NC_015672.1 2271711 2271974 R PFAM: YHS domain; COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: ddf:DEFDS_0350 single-stranded nucleic acid binding protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Single-stranded nucleic acid binding protein; YHS domain-containing protein complement(2271711..2271974) Flexistipes sinusarabici DSM 4947 10816451 YP_004604314.1 CDS Flexsi_2121 NC_015672.1 2271964 2272620 R COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane protein oxaA; InterPro IPR019998:IPR020001:IPR001708; KEGG: cni:Calni_1028 membrane protein insertase, YidC/oxa1 family; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; Membrane insertion protein, OxoA/YidC, N-terminal; single-stranded nucleic acid binding R3H domain-containing protein complement(2271964..2272620) Flexistipes sinusarabici DSM 4947 10816452 YP_004604315.1 CDS Flexsi_2122 NC_015672.1 2272631 2274181 R PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: ddf:DEFDS_0348 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein DEFDS_0348; TIGRFAM: Protein of unknown function DUF37; manually curated; membrane protein OxaA complement(2272631..2274181) Flexistipes sinusarabici DSM 4947 10816453 YP_004604316.1 CDS Flexsi_2123 NC_015672.1 2274204 2274401 R PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0594 RNase P protein component; HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: ddf:DEFDS_0347 ribonuclease P protein component; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; hypothetical protein complement(2274204..2274401) Flexistipes sinusarabici DSM 4947 10816454 YP_004604317.1 CDS Flexsi_2124 NC_015672.1 2274394 2274732 R PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: dap:Dacet_0033 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; ribonuclease P protein component complement(2274394..2274732) Flexistipes sinusarabici DSM 4947 10816455 YP_004604318.1 CDS Flexsi_2125 NC_015672.1 2274736 2274879 R PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 complement(2274736..2274879) Flexistipes sinusarabici DSM 4947 10816456 YP_004604319.1 CDS Flexsi_2126 NC_015672.1 2275667 2276701 D PFAM: DNA methylase; InterPro IPR002789; KEGG: sea:SeAg_B4804 hypothetical protein; PFAM: Protein of unknown function DUF87; SPTR: Putative uncharacterized protein; DNA methylase N-4/N-6 domain-containing protein 2275667..2276701 Flexistipes sinusarabici DSM 4947 10816458 YP_004604320.1 CDS Flexsi_2127 NC_015672.1 2276682 2278733 D PFAM: Domain of unknown function DUF87; InterPro IPR018977; KEGG: mma:MM_0197 hypothetical protein; PFAM: NurA domain; SPTR: Conserved protein; hypothetical protein 2276682..2278733 Flexistipes sinusarabici DSM 4947 10816459 YP_004604321.1 CDS Flexsi_2128 NC_015672.1 2278738 2280096 D PFAM: NurA domain; manually curated; NurA domain-containing protein 2278738..2280096 Flexistipes sinusarabici DSM 4947 10816460 YP_004604322.1 CDS Flexsi_2131 NC_015672.1 2281160 2282479 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgn:PGN_0575 transposase in ISPg1; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 2281160..2282479 Flexistipes sinusarabici DSM 4947 10816463 YP_004604323.1 CDS Flexsi_2132 NC_015672.1 2282678 2283580 R PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR011777:IPR006076; KEGG: pca:Pcar_2388 flavoprotein-containing dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Flavoprotein-containing dehydrogenase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; transposase IS4 family protein complement(2282678..2283580) Flexistipes sinusarabici DSM 4947 10816464 YP_004604324.1 CDS Flexsi_2133 NC_015672.1 2283712 2284680 R PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family; manually curated; geranylgeranyl reductase complement(2283712..2284680) Flexistipes sinusarabici DSM 4947 10816465 YP_004604325.1 CDS Flexsi_2135 NC_015672.1 2286916 2288235 R PFAM: Transposase DDE domain; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807; KEGG: dap:Dacet_2797 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; transposase IS4 family protein complement(2286916..2288235) Flexistipes sinusarabici DSM 4947 10816471 YP_004604326.1 CDS Flexsi_2136 NC_015672.1 2288355 2288939 D PFAM: Imidazoleglycerol-phosphate dehydratase; COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: cni:Calni_1940 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase subunit hisH; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; imidazoleglycerol-phosphate dehydratase 2288355..2288939 Flexistipes sinusarabici DSM 4947 10816472 YP_004604327.1 CDS Flexsi_2137 NC_015672.1 2288944 2289558 D PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; InterPro IPR006063:IPR006062; KEGG: cni:Calni_1939 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; imidazole glycerol phosphate synthase subunit hisH 2288944..2289558 Flexistipes sinusarabici DSM 4947 10816473 YP_004604328.1 CDS Flexsi_2138 NC_015672.1 2289552 2290277 D PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: ddf:DEFDS_0041 phosphatidylglycerophosphatase; PFAM: Phosphatidylglycerophosphatase A; SPTR: Phosphatidylglycerophosphatase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2289552..2290277 Flexistipes sinusarabici DSM 4947 10816474 YP_004604329.1 CDS Flexsi_2139 NC_015672.1 2290270 2290713 D PFAM: Phosphatidylglycerophosphatase A; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR008136:IPR001453; KEGG: cni:Calni_1937 competence/damage-inducible protein CinA; PFAM: CinA, C-terminal; Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; phosphatidylglycerophosphatase A 2290270..2290713 Flexistipes sinusarabici DSM 4947 10816475 YP_004604330.1 CDS Flexsi_2140 NC_015672.1 2290710 2291936 D PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1514 2'-5' RNA ligase; InterPro IPR004175:IPR014051; KEGG: ddf:DEFDS_0039 2'-5' RNA ligase; PFAM: Phosphoesterase, HXTX; SPTR: 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; competence/damage-inducible protein CinA 2290710..2291936 Flexistipes sinusarabici DSM 4947 10816476 YP_004604331.1 CDS Flexsi_2141 NC_015672.1 2291933 2292475 D PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765:IPR003593; KEGG: ddf:DEFDS_0038 DNA recombination protein RecA; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; 2'-5' RNA ligase 2291933..2292475 Flexistipes sinusarabici DSM 4947 10816477 YP_004604332.1 CDS Flexsi_2142 NC_015672.1 2292492 2293538 D PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482; KEGG: ddf:DEFDS_0037 twitching motility protein PilT; PFAM: Type II secretion system protein E; SPTR: Twitching motility protein PilT; TIGRFAM: Pilus retraction protein PilT; protein recA 2292492..2293538 Flexistipes sinusarabici DSM 4947 10816478 YP_004604333.1 CDS Flexsi_2143 NC_015672.1 2293531 2294652 D PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; COGs: COG2137 conserved hypothetical protein; KEGG: ddf:DEFDS_0036 regulatory protein RecX; SPTR: Regulatory protein recX; twitching motility protein 2293531..2294652 Flexistipes sinusarabici DSM 4947 10816479 YP_004604334.1 CDS Flexsi_2144 NC_015672.1 2294633 2295145 D PFAM: RecX family; COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020594:IPR020070:IPR020069; KEGG: bts:Btus_3301 ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; hypothetical protein 2294633..2295145 Flexistipes sinusarabici DSM 4947 10816480 YP_004604335.1 CDS Flexsi_2145 NC_015672.1 2295126 2295572 D PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; COGs: COG0305 Replicative DNA helicase; InterPro IPR007692:IPR003593:IPR007693:IPR007694; KEGG: ddf:DEFDS_0034 replicative DNA helicase DnaB; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Replicative DNA helicase DnaB; TIGRFAM: DNA helicase, DnaB type; 50S ribosomal protein L9 2295126..2295572 Flexistipes sinusarabici DSM 4947 10816481 YP_004604336.1 CDS Flexsi_2146 NC_015672.1 2295586 2296959 D PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; InterPro IPR004463; KEGG: ddf:DEFDS_0033 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; replicative DNA helicase 2295586..2296959 Flexistipes sinusarabici DSM 4947 10816482 YP_004604337.1 CDS Flexsi_2147 NC_015672.1 2297260 2298171 D PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: ddf:DEFDS_1961 peptidase M48 family; PFAM: Peptidase M48, Ste24p; PRIAM: Ste24 endopeptidase; SPTR: Peptidase, M48 family; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 2297260..2298171 Flexistipes sinusarabici DSM 4947 10816483 YP_004604338.1 CDS Flexsi_2148 NC_015672.1 2298688 2299929 D PFAM: Peptidase family M48; COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase; InterPro IPR004500:IPR002314:IPR007214:IPR004154; KEGG: cni:Calni_0984 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; Ste24 endopeptidase 2298688..2299929 Flexistipes sinusarabici DSM 4947 10816484 YP_004604339.1 CDS Flexsi_2149 NC_015672.1 2300090 2301811 R PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: ddf:DEFDS_1144 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; prolyl-tRNA synthetase complement(2300090..2301811) Flexistipes sinusarabici DSM 4947 10816485 YP_004604340.1 CDS Flexsi_2150 NC_015672.1 2301942 2302826 D PFAM: Radical SAM superfamily; COGs: COG0679 permease; InterPro IPR004776; KEGG: cni:Calni_0181 auxin efflux carrier; PFAM: Auxin efflux carrier; SPTR: Auxin Efflux Carrier; radical SAM protein 2301942..2302826 Flexistipes sinusarabici DSM 4947 10816486 YP_004604341.1 CDS Flexsi_2151 NC_015672.1 2303336 2304253 R PFAM: Membrane transport protein; COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR004605:IPR003593:IPR008824:IPR003959:IPR 008823; KEGG: ddf:DEFDS_1809 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; auxin efflux carrier complement(2303336..2304253) Flexistipes sinusarabici DSM 4947 10816487 YP_004604342.1 CDS Flexsi_2152 NC_015672.1 2304603 2305730 D PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593; KEGG: cni:Calni_0998 DNA replication and repair protein RadA; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; Holliday junction ATP-dependent DNA helicase ruvB 2304603..2305730 Flexistipes sinusarabici DSM 4947 10816488 YP_004604343.1 CDS Flexsi_2153 NC_015672.1 2305737 2307095 D PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002198; KEGG: ddf:DEFDS_1807 enoyl-[acyl-carrier protein] reductase (NADH); PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH); SPTR: Enoyl-[acyl-carrier-protein] reductase [NADH]; DNA repair protein RadA 2305737..2307095 Flexistipes sinusarabici DSM 4947 10816489 YP_004604344.1 CDS Flexsi_2154 NC_015672.1 2307115 2307879 D PFAM: short chain dehydrogenase; InterPro IPR002482:IPR018392; KEGG: ddf:DEFDS_0274 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; enoyl-(acyl carrier protein) reductase 2307115..2307879 Flexistipes sinusarabici DSM 4947 10816490 YP_004604345.1 CDS Flexsi_2155 NC_015672.1 2307978 2308958 R PFAM: LysM domain; COGs: COG1729 conserved hypothetical protein; InterPro IPR014162; KEGG: ddf:DEFDS_0275 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Tol-Pal system, YbgF; peptidoglycan-binding lysin domain-containing protein complement(2307978..2308958) Flexistipes sinusarabici DSM 4947 10816491 YP_004604346.1 CDS Flexsi_2156 NC_015672.1 2308962 2309738 R TIGRFAM: tol-pal system protein YbgF; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: ddf:DEFDS_0829 ferritin; PFAM: Ferritin/Dps protein; PRIAM: Ferroxidase; SPTR: Ferritin; tol-pal system protein YbgF complement(2308962..2309738) Flexistipes sinusarabici DSM 4947 10816492 YP_004604347.1 CDS Flexsi_2157 NC_015672.1 2310023 2310535 D PFAM: Ferritin-like domain; KEGG: cni:Calni_1683 hypothetical protein; ferroxidase 2310023..2310535 Flexistipes sinusarabici DSM 4947 10816493 YP_004604348.1 CDS Flexsi_2158 NC_015672.1 2310612 2310752 R COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: ddf:DEFDS_0177 heme exporter membrane protein; PFAM: Cytochrome c assembly protein; SPTR: Heme exporter membrane protein; hypothetical protein complement(2310612..2310752) Flexistipes sinusarabici DSM 4947 10816494 YP_004604349.1 CDS Flexsi_2159 NC_015672.1 2310749 2311420 R PFAM: Cytochrome C assembly protein; COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: cni:Calni_1685 cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB; cytochrome c assembly protein complement(2310749..2311420) Flexistipes sinusarabici DSM 4947 10816495 YP_004604350.1 CDS Flexsi_2160 NC_015672.1 2311424 2312104 R PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_0175 heme exporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Heme exporter ATP-binding protein; cytochrome c-type biogenesis protein CcmB complement(2311424..2312104) Flexistipes sinusarabici DSM 4947 10816496 YP_004604351.1 CDS Flexsi_2161 NC_015672.1 2312113 2312820 R PFAM: ABC transporter; COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: ddf:DEFDS_0174 cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein CcmF; polyamine-transporting ATPase complement(2312113..2312820) Flexistipes sinusarabici DSM 4947 10816497 YP_004604352.1 CDS Flexsi_2162 NC_015672.1 2312801 2314780 R PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: cni:Calni_0661 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase M16 domain protein; cytochrome c assembly protein complement(2312801..2314780) Flexistipes sinusarabici DSM 4947 10816498 YP_004604353.1 CDS Flexsi_2163 NC_015672.1 2315028 2316293 D PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: dap:Dacet_0255 RNA-binding S4 domain protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: RNA-binding S4 domain protein; peptidase M16 domain-containing protein 2315028..2316293 Flexistipes sinusarabici DSM 4947 10816499 YP_004604354.1 CDS Flexsi_2164 NC_015672.1 2316411 2316689 R PFAM: S4 domain; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: cni:Calni_0108 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; RNA-binding S4 domain-containing protein complement(2316411..2316689) Flexistipes sinusarabici DSM 4947 10816500 YP_004604355.1 CDS Flexsi_2165 NC_015672.1 2316679 2317488 R PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR003141:IPR004013:IPR011708:IPR 004365; KEGG: ddf:DEFDS_2002 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; phosphomethylpyrimidine kinase complement(2316679..2317488) Flexistipes sinusarabici DSM 4947 10816501 YP_004604356.1 CDS Flexsi_2166 NC_015672.1 2317500 2320985 R PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: ddf:DEFDS_2001 molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; DNA polymerase III subunit alpha complement(2317500..2320985) Flexistipes sinusarabici DSM 4947 10816502 YP_004604357.1 CDS Flexsi_2167 NC_015672.1 2320995 2321618 R PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: ddf:DEFDS_2000 hypothetical protein; PFAM: ComEC/Rec2-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: ComEC/Rec2-related protein; molybdopterin-guanine dinucleotide biosynthesis protein B complement(2320995..2321618) Flexistipes sinusarabici DSM 4947 10816503 YP_004604358.1 CDS Flexsi_2168 NC_015672.1 2321703 2323403 D PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR012729:IPR000594; KEGG: ddf:DEFDS_1999 thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: Thiamine biosynthesis protein ThiF; TIGRFAM: Thiamine biosynthesis protein ThiF; ComEC/Rec2-like protein 2321703..2323403 Flexistipes sinusarabici DSM 4947 10816504 YP_004604359.1 CDS Flexsi_2169 NC_015672.1 2323396 2324199 D PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2; InterPro IPR010035:IPR003749; KEGG: dsa:Desal_2647 thiamine biosynthesis protein ThiS; PFAM: ThiamineS; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; thiamine biosynthesis protein ThiF 2323396..2324199 Flexistipes sinusarabici DSM 4947 10816505 YP_004604360.1 CDS Flexsi_2170 NC_015672.1 2324196 2324396 D PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2324196..2324396 Flexistipes sinusarabici DSM 4947 10816506 YP_004604361.1 CDS Flexsi_2171 NC_015672.1 2324402 2324845 R COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610:IPR001667:IPR003156; KEGG: ddf:DEFDS_0047 single-strand DNA-specific exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-strand DNA-specific exonuclease; TIGRFAM: Bacterial RecJ exonuclease; hypothetical protein complement(2324402..2324845) Flexistipes sinusarabici DSM 4947 10816507 YP_004604362.1 CDS Flexsi_2172 NC_015672.1 2325517 2327280 D PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR004811:IPR003607:IPR006674:IPR007685:IPR 004095:IPR002912; KEGG: ddf:DEFDS_0048 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; PRIAM: GTP diphosphokinase; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; single-stranded-DNA-specific exonuclease RecJ 2325517..2327280 Flexistipes sinusarabici DSM 4947 10816508 YP_004604363.1 CDS Flexsi_2173 NC_015672.1 2327277 2329409 D PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: ddf:DEFDS_0316 50S ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; (p)ppGpp synthetase I SpoT/RelA 2327277..2329409 Flexistipes sinusarabici DSM 4947 10816509 YP_004604364.1 CDS Flexsi_2174 NC_015672.1 2329441 2329632 R PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; InterPro IPR015077; KEGG: ddf:DEFDS_0803 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: Putative uncharacterized protein; 50S ribosomal protein L28 complement(2329441..2329632) Flexistipes sinusarabici DSM 4947 10816510 YP_004604365.1 CDS Flexsi_2175 NC_015672.1 2329731 2329928 D PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain; COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; InterPro IPR003358; KEGG: cni:Calni_0597 tRNA (guanine-n(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; hypothetical protein 2329731..2329928 Flexistipes sinusarabici DSM 4947 10816511 YP_004604366.1 CDS Flexsi_2176 NC_015672.1 2329941 2330609 D PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: dap:Dacet_0511 hypothetical protein; PFAM: Nodulation efficiency, NfeD; SPTR: Putative uncharacterized protein; tRNA (guanine-N(7)-)-methyltransferase 2329941..2330609 Flexistipes sinusarabici DSM 4947 10816512 YP_004604367.1 CDS Flexsi_2177 NC_015672.1 2330614 2331888 D PFAM: Clp protease; NfeD-like; KEGG: dap:Dacet_0510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2330614..2331888 Flexistipes sinusarabici DSM 4947 10816513 YP_004604368.1 CDS Flexsi_2178 NC_015672.1 2331881 2332138 D PFAM: Protein of unknown function (DUF493); COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: ddf:DEFDS_0203 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; hypothetical protein 2331881..2332138 Flexistipes sinusarabici DSM 4947 10816514 YP_004604369.1 CDS Flexsi_2179 NC_015672.1 2332184 2332633 D PFAM: Universal stress protein family; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853:IPR010656; KEGG: dap:Dacet_1218 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; UspA domain-containing protein 2332184..2332633 Flexistipes sinusarabici DSM 4947 10816515 YP_004604370.1 CDS Flexsi_2180 NC_015672.1 2333020 2335065 R PFAM: Domain of unknown function (DUF3394); DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ddf:DEFDS_1847 TRAP-type transporter substrate-binding protein; SPTR: TRAP-type transport system, substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter, 4TM/12TM fusion protein complement(2333020..2335065) Flexistipes sinusarabici DSM 4947 10816516 YP_004604371.1 CDS Flexsi_2181 NC_015672.1 2335170 2336165 R PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: UvrABC system protein C; InterPro IPR004791:IPR000305:IPR001943:IPR001162; KEGG: cni:Calni_1412 excinuclease abc, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; TRAP transporter solute receptor, TAXI family complement(2335170..2336165) Flexistipes sinusarabici DSM 4947 10816517 YP_004604372.1 CDS Flexsi_2182 NC_015672.1 2336738 2338552 D PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; COGs: COG0797 Lipoprotein; InterPro IPR012997:IPR005132:IPR007730; KEGG: ddf:DEFDS_2081 rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria; SPTR: Rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; UvrABC system protein C 2336738..2338552 Flexistipes sinusarabici DSM 4947 10816518 YP_004604373.1 CDS Flexsi_2183 NC_015672.1 2338567 2339286 R PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; COGs: COG2603 ATPase; InterPro IPR017582:IPR001763; KEGG: dap:Dacet_0054 tRNA 2-selenouridine synthase; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; rare lipoprotein A complement(2338567..2339286) Flexistipes sinusarabici DSM 4947 10816519 YP_004604374.1 CDS Flexsi_2184 NC_015672.1 2339264 2340313 R PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: cni:Calni_1696 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; tRNA 2-selenouridine synthase complement(2339264..2340313) Flexistipes sinusarabici DSM 4947 10816520 YP_004604375.1 CDS Flexsi_2185 NC_015672.1 2340314 2341207 R PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0260 Leucyl aminopeptidase; HAMAP: cytosol aminopeptidase; InterPro IPR000819; KEGG: ddf:DEFDS_2072 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; SPTR: Probable cytosol aminopeptidase; LysR family transcriptional regulator complement(2340314..2341207) Flexistipes sinusarabici DSM 4947 10816521 YP_004604376.1 CDS Flexsi_2186 NC_015672.1 2341409 2342902 R PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: tcx:Tcr_1009 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylglycohydrolase family protein; cytosol aminopeptidase complement(2341409..2342902) Flexistipes sinusarabici DSM 4947 10816522 YP_004604377.1 CDS Flexsi_2187 NC_015672.1 2343095 2344159 D PFAM: ADP-ribosylglycohydrolase; KEGG: ddf:DEFDS_1792 hypothetical protein; SPTR: Putative uncharacterized protein; ADP-ribosylation/Crystallin J1 2343095..2344159 Flexistipes sinusarabici DSM 4947 10816523 YP_004604378.1 CDS Flexsi_2188 NC_015672.1 2344335 2345615 D COGs: COG2105 conserved hypothetical protein; InterPro IPR009288; KEGG: ddf:DEFDS_1791 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; hypothetical protein 2344335..2345615 Flexistipes sinusarabici DSM 4947 10816524 YP_004604379.1 CDS Flexsi_2189 NC_015672.1 2345625 2346122 D PFAM: AIG2-like family; AIG2 family protein 2345625..2346122 Flexistipes sinusarabici DSM 4947 10816525 YP_004604380.1 CDS Flexsi_2190 NC_015672.1 2346285 2346521 D COGs: COG5421 Transposase; KEGG: msv:Mesil_3173 transposase IS4 family protein; SPTR: Transposase IS4 family protein; hypothetical protein 2346285..2346521 Flexistipes sinusarabici DSM 4947 10816526 YP_004604381.1 CDS Flexsi_2191 NC_015672.1 2346643 2348055 D PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 2346643..2348055 Flexistipes sinusarabici DSM 4947 10816527 YP_004604382.1 CDS Flexsi_2192 NC_015672.1 2348168 2349535 D PFAM: Transposase domain (DUF772); transposase IS4 family protein 2348168..2349535 Flexistipes sinusarabici DSM 4947 10816528 YP_004604383.1 CDS Flexsi_2193 NC_015672.1 2349528 2349965 D PFAM: Response regulator receiver domain; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: dap:Dacet_2411 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein Dacet_2411; TIGRFAM: Uncharacterised protein family UPF0102; hypothetical protein 2349528..2349965 Flexistipes sinusarabici DSM 4947 10816529 YP_004604384.1 CDS Flexsi_2194 NC_015672.1 2349955 2350299 R PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: cni:Calni_1995 ribonuclease H; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease; hypothetical protein complement(2349955..2350299) Flexistipes sinusarabici DSM 4947 10816530 YP_004604385.1 CDS Flexsi_2195 NC_015672.1 2350277 2350840 R PFAM: Ribonuclease HII; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004392:IPR003495; KEGG: cni:Calni_1996 hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; SPTR: Hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; ribonuclease H complement(2350277..2350840) Flexistipes sinusarabici DSM 4947 10816531 YP_004604386.1 CDS Flexsi_2196 NC_015672.1 2350837 2351505 R PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; InterPro IPR000688; KEGG: ddf:DEFDS_0183 hydrogenase expression/synthesis protein HypA; PFAM: Hydrogenase nickel incorporation protein HypA/HybF; SPTR: Probable hydrogenase nickel incorporation protein hypA; TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; hydrogenase nickel incorporation protein HypB complement(2350837..2351505) Flexistipes sinusarabici DSM 4947 10816532 YP_004604387.1 CDS Flexsi_2197 NC_015672.1 2351505 2351846 R PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; COGs: COG3605 Signal transduction protein containing GAF and PtsI domains; InterPro IPR003018:IPR008731:IPR008279:IPR000121; KEGG: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; GAF; PEP-utilising enzyme, mobile region; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SMART: GAF; SPTR: Phosphoenolpyruvate-protein phosphotransferase; hydrogenase nickel incorporation protein HypA complement(2351505..2351846) Flexistipes sinusarabici DSM 4947 10816533 YP_004604388.1 CDS Flexsi_2198 NC_015672.1 2352080 2354203 D PFAM: GAF domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR002489:IPR006076:IPR001327:IPR001450; KEGG: ddf:DEFDS_2136 ferredoxin-dependent glutamate synthase subunit beta; PFAM: FAD dependent oxidoreductase; Glutamate synthase, alpha subunit, C-terminal; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Glutamate synthase (NADPH); SPTR: Ferredoxin-dependent glutamate synthase, beta subunit; protein PtsP 2352080..2354203 Flexistipes sinusarabici DSM 4947 10816534 YP_004604389.1 CDS Flexsi_2199 NC_015672.1 2354499 2356838 R PFAM: Pyridine nucleotide-disulphide oxidoreductase; GXGXG motif; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR001450:IPR002932; KEGG: ddf:DEFDS_2137 ferredoxin-dependent glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Glutamate synthase (NADPH); SPTR: Ferredoxin-dependent glutamate synthase, alpha subunit; glutamate synthase complement(2354499..2356838) Flexistipes sinusarabici DSM 4947 10816535 YP_004604390.1 CDS Flexsi_2200 NC_015672.1 2356851 2358494 R PFAM: 4Fe-4S binding domain; Conserved region in glutamate synthase; KEGG: ddf:DEFDS_2138 hypothetical protein; SPTR: Putative uncharacterized protein; glutamate synthase complement(2356851..2358494) Flexistipes sinusarabici DSM 4947 10816536 YP_004604391.1 CDS Flexsi_2201 NC_015672.1 2358482 2359588 R PFAM: Glutamine amidotransferases class-II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: dap:Dacet_1550 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aminotransferase class I and II; hypothetical protein complement(2358482..2359588) Flexistipes sinusarabici DSM 4947 10816537 YP_004604392.1 CDS Flexsi_2202 NC_015672.1 2359784 2361067 D PFAM: Aminotransferase class I and II; COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787; KEGG: ddf:DEFDS_0265 50S ribosomal protein L21; PFAM: Ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; aspartate transaminase 2359784..2361067 Flexistipes sinusarabici DSM 4947 10816538 YP_004604393.1 CDS Flexsi_2203 NC_015672.1 2361427 2361738 D PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: ddf:DEFDS_0266 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; 50S ribosomal protein L21 2361427..2361738 Flexistipes sinusarabici DSM 4947 10816539 YP_004604394.1 CDS Flexsi_2204 NC_015672.1 2361752 2362015 D PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0536 GTPase; HAMAP: GTPase obg; InterPro IPR014100:IPR006169:IPR002917; KEGG: cni:Calni_2040 gtp-binding protein obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; 50S ribosomal protein L27 2361752..2362015 Flexistipes sinusarabici DSM 4947 10816540 YP_004604395.1 CDS Flexsi_2205 NC_015672.1 2362071 2363084 D PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; InterPro IPR007922; KEGG: ddf:DEFDS_0268 hypothetical protein; PFAM: Protein of unknown function DUF721; SPTR: Putative uncharacterized protein; GTPase obg 2362071..2363084 Flexistipes sinusarabici DSM 4947 10816541 YP_004604396.1 CDS Flexsi_2206 NC_015672.1 2363074 2363517 D PFAM: Protein of unknown function (DUF721); COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: dap:Dacet_0028 peptide deformylase; PFAM: Formylmethionine deformylase; SPTR: Peptide deformylase 1; TIGRFAM: Formylmethionine deformylase; hypothetical protein 2363074..2363517 Flexistipes sinusarabici DSM 4947 10816542 YP_004604397.1 CDS Flexsi_2207 NC_015672.1 2363555 2364064 D PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG2183 Transcriptional accessory protein; InterPro IPR018974:IPR003029:IPR006641; KEGG: dap:Dacet_1817 Tex-like protein protein-like protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; SPTR: Tex-like protein protein-like protein; peptide deformylase 2363555..2364064 Flexistipes sinusarabici DSM 4947 10816543 YP_004604398.1 CDS Flexsi_2208 NC_015672.1 2364260 2366374 D PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910:IPR002201; KEGG: ddf:DEFDS_1147 ADP-heptose:LPS heptosyltransferase II; PFAM: Glycosyl transferase, family 9; SPTR: ADP-heptose:LPS heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase II; Tex-like protein 2364260..2366374 Flexistipes sinusarabici DSM 4947 10816544 YP_004604399.1 CDS Flexsi_2209 NC_015672.1 2366389 2367429 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: ddf:DEFDS_1146 heptosyltransferase family protein; PFAM: Glycosyl transferase, family 9; SPTR: Heptosyltransferase family protein; lipopolysaccharide heptosyltransferase II 2366389..2367429 Flexistipes sinusarabici DSM 4947 10816545 YP_004604400.1 CDS Flexsi_2210 NC_015672.1 2367426 2368379 D PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: saf:SULAZ_1499 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 2367426..2368379 Flexistipes sinusarabici DSM 4947 10816546 YP_004604401.1 CDS Flexsi_2211 NC_015672.1 2368383 2369153 D PFAM: DUF218 domain; COGs: COG5421 Transposase; KEGG: msv:Mesil_3173 transposase IS4 family protein; SPTR: Transposase IS4 family protein; hypothetical protein 2368383..2369153 Flexistipes sinusarabici DSM 4947 10816547 YP_004604402.1 CDS Flexsi_2212 NC_015672.1 2369370 2369858 R PFAM: Transposase DDE domain; manually curated; hypothetical protein complement(2369370..2369858) Flexistipes sinusarabici DSM 4947 10816548 YP_004604403.1 CDS Flexsi_2214 NC_015672.1 2371627 2372556 D PFAM: Peptidase family M23; COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); HAMAP: Arginine biosynthesis protein ArgJ; InterPro IPR002813; KEGG: ddf:DEFDS_2004 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ; PRIAM: Glutamate N-acetyltransferase; SPTR: Arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; peptidase M23 2371627..2372556 Flexistipes sinusarabici DSM 4947 10816550 YP_004604404.1 CDS Flexsi_2215 NC_015672.1 2372563 2373771 R PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; InterPro IPR000706:IPR000534:IPR012280; KEGG: ddf:DEFDS_0210 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; arginine biosynthesis protein ArgJ complement(2372563..2373771) Flexistipes sinusarabici DSM 4947 10816551 YP_004604405.1 CDS Flexsi_2216 NC_015672.1 2373780 2374784 R PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; InterPro IPR008179; KEGG: cni:Calni_0265 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; SPTR: Phosphoribosyl-ATP pyrophosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; N-acetyl-gamma-glutamyl-phosphate reductase complement(2373780..2374784) Flexistipes sinusarabici DSM 4947 10816552 YP_004604406.1 CDS Flexsi_2217 NC_015672.1 2375006 2375290 R PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; InterPro IPR004651:IPR006062; KEGG: dap:Dacet_3004 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; phosphoribosyl-ATP pyrophosphatase complement(2375006..2375290) Flexistipes sinusarabici DSM 4947 10816553 YP_004604407.1 CDS Flexsi_2218 NC_015672.1 2375299 2376057 R PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR011701; KEGG: cni:Calni_1901 drug resistance transporter, EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; imidazole glycerol phosphate synthase subunit hisF complement(2375299..2376057) Flexistipes sinusarabici DSM 4947 10816554 YP_004604408.1 CDS Flexsi_2219 NC_015672.1 2376101 2377672 R PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_0616 multidrug-efflux transporter MFP family; PFAM: Secretion protein HlyD; SPTR: Multidrug-efflux transporter, MFP family; EmrB/QacA subfamily drug resistance transporter complement(2376101..2377672) Flexistipes sinusarabici DSM 4947 10816555 YP_004604409.1 CDS Flexsi_2220 NC_015672.1 2377676 2378803 R PFAM: HlyD family secretion protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_0615 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; secretion protein HlyD family protein complement(2377676..2378803) Flexistipes sinusarabici DSM 4947 10816556 YP_004604410.1 CDS Flexsi_2221 NC_015672.1 2378808 2380100 R PFAM: Outer membrane efflux protein; COGs: COG1330 Exonuclease V gamma subunit; InterPro IPR006697; KEGG: gur:Gura_0582 exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; PRIAM: Exodeoxyribonuclease V; SPTR: DNA helicase/exodeoxyribonuclease V, gamma subunit; TIGRFAM: Exodeoxyribonuclease V, RecC subunit; outer membrane efflux protein complement(2378808..2380100) Flexistipes sinusarabici DSM 4947 10816557 YP_004604411.1 CDS Flexsi_2222 NC_015672.1 2380504 2383728 D PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR004586:IPR000212; KEGG: sat:SYN_02552 exodeoxyribonuclease V subunit beta; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; TIGRFAM: Exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit gamma 2380504..2383728 Flexistipes sinusarabici DSM 4947 10816558 YP_004604412.1 CDS Flexsi_2223 NC_015672.1 2383718 2387410 D PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR006344:IPR000606; KEGG: gem:GM21_0323 exodeoxyribonuclease V, alpha subunit; PFAM: RNA helicase 1, viral; PRIAM: Exodeoxyribonuclease V; SPTR: Exodeoxyribonuclease V, alpha subunit; TIGRFAM: Exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit beta 2383718..2387410 Flexistipes sinusarabici DSM 4947 10816559 YP_004604413.1 CDS Flexsi_2224 NC_015672.1 2387397 2389208 D PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: dat:HRM2_35330 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: MnhA1; exodeoxyribonuclease V subunit alpha 2387397..2389208 Flexistipes sinusarabici DSM 4947 10816560 YP_004604414.1 CDS Flexsi_2225 NC_015672.1 2389315 2391057 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; KEGG: dat:HRM2_35340 hypothetical protein; SPTR: Putative uncharacterized protein; NADH dehydrogenase (quinone) complement(2389315..2391057) Flexistipes sinusarabici DSM 4947 10816561 YP_004604415.1 CDS Flexsi_2226 NC_015672.1 2391050 2391295 R hypothetical protein complement(2391050..2391295) Flexistipes sinusarabici DSM 4947 10816562 YP_004604416.1 CDS Flexsi_2227 NC_015672.1 2391309 2391455 R COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001750; KEGG: cni:Calni_0531 multisubunit sodium/proton antiporter, mrpd subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: Multisubunit sodium/proton antiporter, MrpD subunit; hypothetical protein complement(2391309..2391455) Flexistipes sinusarabici DSM 4947 10816563 YP_004604417.1 CDS Flexsi_2228 NC_015672.1 2391455 2392939 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: cni:Calni_0530 NADH/ubiquinone/plastoquinone (complex i); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH/Ubiquinone/plastoquinone (Complex I); NADH dehydrogenase (quinone) complement(2391455..2392939) Flexistipes sinusarabici DSM 4947 10816564 YP_004604418.1 CDS Flexsi_2229 NC_015672.1 2392930 2394438 R PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: dal:Dalk_4921 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain 4L; NADH dehydrogenase (quinone) complement(2392930..2394438) Flexistipes sinusarabici DSM 4947 10816565 YP_004604419.1 CDS Flexsi_2230 NC_015672.1 2394435 2394824 R PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; InterPro IPR007182; KEGG: cni:Calni_0528 na+/h+ antiporter MnhB subunit-related protein; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Na+/H+ antiporter MnhB subunit-related protein; NADH-ubiquinone oxidoreductase chain 4L complement(2394435..2394824) Flexistipes sinusarabici DSM 4947 10816566 YP_004604420.1 CDS Flexsi_2231 NC_015672.1 2394817 2395239 R PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; KEGG: cni:Calni_0527 multicomponent na+-h+ antiporter subunit A; SPTR: Putative multicomponent Na+-H+ antiporter subunit A; Na+/H+ antiporter MnhB subunit-like protein complement(2394817..2395239) Flexistipes sinusarabici DSM 4947 10816567 YP_004604421.1 CDS Flexsi_2232 NC_015672.1 2395229 2395789 R COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: cni:Calni_0526 monovalent cation/proton antiporter, mnhg/PhaG subunit; PFAM: Na+/H+ antiporter subunit; SPTR: Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: Na+/H+ antiporter subunit; multicomponent na+-h+ antiporter subunit A complement(2395229..2395789) Flexistipes sinusarabici DSM 4947 10816568 YP_004604422.1 CDS Flexsi_2233 NC_015672.1 2395776 2396093 R PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; InterPro IPR007208; KEGG: cni:Calni_0525 multisubunit sodium/proton antiporter, mrpf subunit; PFAM: Multiple resistance and pH regulation protein F; SPTR: Multisubunit sodium/proton antiporter, MrpF subunit; monovalent cation/proton antiporter subunit MnhG/PhaG complement(2395776..2396093) Flexistipes sinusarabici DSM 4947 10816569 YP_004604423.1 CDS Flexsi_2234 NC_015672.1 2396111 2396365 R PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: cni:Calni_0524 cation antiporter; PFAM: cation antiporter; SPTR: Cation antiporter; multiple resistance and pH regulation protein F complement(2396111..2396365) Flexistipes sinusarabici DSM 4947 10816570 YP_004604424.1 CDS Flexsi_2235 NC_015672.1 2396368 2396835 R PFAM: Na+/H+ ion antiporter subunit; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR001453; KEGG: ddf:DEFDS_0823 molybdopterin biosynthesis protein; PFAM: Molybdopterin binding; SPTR: Molybdopterin biosynthesis protein; cation antiporter complement(2396368..2396835) Flexistipes sinusarabici DSM 4947 10816571 YP_004604425.1 CDS Flexsi_2236 NC_015672.1 2397406 2398437 D PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR005116:IPR003593; KEGG: ddf:DEFDS_0824 molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1; PRIAM: Molybdate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Molybdate ABC transporter, ATP-binding protein; molybdopterin binding domain-containing protein 2397406..2398437 Flexistipes sinusarabici DSM 4947 10816572 YP_004604426.1 CDS Flexsi_2237 NC_015672.1 2398425 2399495 D PFAM: ABC transporter; TOBE domain; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950:IPR006059; KEGG: ddf:DEFDS_0825 molybdate ABC transporter substrate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Molybdate ABC transporter, substrate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; molybdate-transporting ATPase 2398425..2399495 Flexistipes sinusarabici DSM 4947 10816573 YP_004604427.1 CDS Flexsi_2238 NC_015672.1 2399508 2400254 D PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515; KEGG: ddf:DEFDS_0826 molybdate ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Molybdate ABC transporter, permease; molybdenum ABC transporter periplasmic molybdate-binding protein 2399508..2400254 Flexistipes sinusarabici DSM 4947 10816574 YP_004604428.1 CDS Flexsi_2239 NC_015672.1 2400254 2401030 D PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: ddf:DEFDS_0827 molybdopterin biosynthesis protein MoeA; PFAM: Molybdopterin binding; MoeA, N-terminal region, domain I/II; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis protein MoeA; TIGRFAM: Molybdenum cofactor synthesis; ABC transporter 2400254..2401030 Flexistipes sinusarabici DSM 4947 10816575 YP_004604429.1 CDS Flexsi_2240 NC_015672.1 2401035 2402222 D PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ddf:DEFDS_0828 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; molybdenum cofactor synthesis domain-containing protein 2401035..2402222 Flexistipes sinusarabici DSM 4947 10816576 YP_004604430.1 CDS Flexsi_2241 NC_015672.1 2402226 2403170 D PFAM: Radical SAM superfamily; HAMAP: Ribosomal protein L25; InterPro IPR001021; KEGG: dap:Dacet_0468 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25; radical SAM protein 2402226..2403170 Flexistipes sinusarabici DSM 4947 10816577 YP_004604431.1 CDS Flexsi_2242 NC_015672.1 2403176 2403820 R PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; KEGG: dap:Dacet_2467 hypothetical protein; SPTR: Putative uncharacterized protein; 50S ribosomal protein L25 complement(2403176..2403820) Flexistipes sinusarabici DSM 4947 10816578 YP_004604432.1 CDS Flexsi_2243 NC_015672.1 2404029 2404427 R This gene is disrupted by insertion of repetitive element; manually curated; hypothetical protein complement(2404029..2404427) Flexistipes sinusarabici DSM 4947 10816579 YP_004604433.1 CDS Flexsi_2245 NC_015672.1 2404898 2405947 R PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR014865; KEGG: cni:Calni_0615 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein complement(2404898..2405947) Flexistipes sinusarabici DSM 4947 10816581 YP_004604434.1 CDS Flexsi_2246 NC_015672.1 2406372 2406860 R PFAM: DsrE/DsrF-like family; COGs: COG1794 Aspartate racemase; InterPro IPR004380:IPR015942; KEGG: swd:Swoo_1908 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: Aspartate racemase; hypothetical protein complement(2406372..2406860) Flexistipes sinusarabici DSM 4947 10816582 YP_004604435.1 CDS Flexsi_2247 NC_015672.1 2407231 2407929 D PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; COGs: COG2606 conserved hypothetical protein; InterPro IPR004369:IPR007214; KEGG: glo:Glov_2948 YbaK/EbsC protein; PFAM: YbaK/aminoacyl-tRNA synthetase associated region; SPTR: YbaK/ebsC protein; TIGRFAM: Conserved hypothetical protein CHP00011; aspartate racemase 2407231..2407929 Flexistipes sinusarabici DSM 4947 10816583 YP_004604436.1 CDS Flexsi_2248 NC_015672.1 2408318 2408806 D PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: cni:Calni_0750 had-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Phosphoglycolate phosphatase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; ybaK/ebsC protein 2408318..2408806 Flexistipes sinusarabici DSM 4947 10816584 YP_004604437.1 CDS Flexsi_2249 NC_015672.1 2408799 2409443 D PFAM: haloacid dehalogenase-like hydrolase; manually curated; HAD-superfamily hydrolase 2408799..2409443 Flexistipes sinusarabici DSM 4947 10816585 YP_004604438.1 CDS Flexsi_2251 NC_015672.1 2409840 2410952 D PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: drt:Dret_0685 amino acid carrier protein; PFAM: Sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; alanine dehydrogenase 2409840..2410952 Flexistipes sinusarabici DSM 4947 10816587 YP_004604439.1 CDS Flexsi_2252 NC_015672.1 2410981 2412363 D PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: ssm:Spirs_1245 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; amino acid carrier protein 2410981..2412363 Flexistipes sinusarabici DSM 4947 10816588 YP_004604440.1 CDS Flexsi_2253 NC_015672.1 2412609 2414057 D PFAM: Radical SAM superfamily; COGs: COG0171 NAD synthase; InterPro IPR003694; KEGG: kol:Kole_1677 NAD+ synthetase; PFAM: NAD+ synthase; PRIAM: NAD(+) synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthase; radical SAM protein 2412609..2414057 Flexistipes sinusarabici DSM 4947 10816589 YP_004604441.1 CDS Flexsi_2254 NC_015672.1 2414067 2414909 D PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; COGs: COG3621 Patatin; InterPro IPR002641; KEGG: mei:Msip34_1961 patatin; PFAM: Patatin; SPTR: Patatin; NAD+ synthetase 2414067..2414909 Flexistipes sinusarabici DSM 4947 10816590 YP_004604442.1 CDS Flexsi_2255 NC_015672.1 2415025 2415960 D PFAM: Patatin-like phospholipase; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: nha:Nham_3886 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR: RNA-directed DNA polymerase (Reverse transcriptase); patatin 2415025..2415960 Flexistipes sinusarabici DSM 4947 10816591 YP_004604443.1 CDS Flexsi_2256 NC_015672.1 2416586 2417893 D PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; InterPro IPR003346; KEGG: sat:SYN_03159 transposase; PFAM: Transposase, IS116/IS110/IS902; SPTR: Transposase; RNA-directed DNA polymerase 2416586..2417893 Flexistipes sinusarabici DSM 4947 10816592 YP_004604444.1 CDS Flexsi_2257 NC_015672.1 2418339 2419523 D PFAM: Transposase IS116/IS110/IS902 family; Transposase; KEGG: mfa:Mfla_1151 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS116/IS110/IS902 family protein 2418339..2419523 Flexistipes sinusarabici DSM 4947 10816593 YP_004604445.1 CDS Flexsi_2258 NC_015672.1 2419851 2420273 R hypothetical protein complement(2419851..2420273) Flexistipes sinusarabici DSM 4947 10816594 YP_004604446.1 CDS Flexsi_2259 NC_015672.1 2420400 2420783 R COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: dba:Dbac_2241 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein complement(2420400..2420783) Flexistipes sinusarabici DSM 4947 10816595 YP_004604447.1 CDS Flexsi_2260 NC_015672.1 2420776 2421348 R COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311:IPR006963:IPR006656:IPR006657; KEGG: dba:Dbac_2242 trimethylamine-N-oxide reductase (cytochrome c); PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Trimethylamine-N-oxide reductase (Cytochrome c); 4Fe-4S ferredoxin complement(2420776..2421348) Flexistipes sinusarabici DSM 4947 10816596 YP_004604448.1 CDS Flexsi_2261 NC_015672.1 2421358 2423625 R PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; InterPro IPR010395; KEGG: drt:Dret_1230 cytoplasmic chaperone TorD family protein; SPTR: Cytoplasmic chaperone TorD family protein; trimethylamine-N-oxide reductase (cytochrome c) complement(2421358..2423625) Flexistipes sinusarabici DSM 4947 10816597 YP_004604449.1 CDS Flexsi_2262 NC_015672.1 2423636 2424169 R PFAM: Nitrate reductase delta subunit; manually curated; cytoplasmic chaperone TorD family protein complement(2423636..2424169) Flexistipes sinusarabici DSM 4947 10816598 YP_004604450.1 CDS Flexsi_2264 NC_015672.1 2425356 2426879 D PFAM: Integrase core domain; InterPro IPR002611; KEGG: toc:Toce_0299 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SPTR: IstB domain protein ATP-binding protein; integrase catalytic subunit 2425356..2426879 Flexistipes sinusarabici DSM 4947 10816600 YP_004604451.1 CDS Flexsi_2265 NC_015672.1 2426866 2427237 D PFAM: IstB-like ATP binding protein; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IstB domain-containing protein ATP-binding protein 2426866..2427237 Flexistipes sinusarabici DSM 4947 10816601 YP_004604452.1 CDS Flexsi_2266 NC_015672.1 2427368 2428687 R PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein complement(2427368..2428687) Flexistipes sinusarabici DSM 4947 10816602 YP_004604453.1 CDS Flexsi_2268 NC_015672.1 2429157 2430095 D PFAM: Transposase DDE domain; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 2429157..2430095 Flexistipes sinusarabici DSM 4947 10816604 YP_004604454.1 CDS Flexsi_2269 NC_015672.1 2430522 2431625 R PFAM: Transposase DDE domain; KEGG: aeh:Mlg_0129 transposase, IS4 family protein; SPTR: Transposase; transposase IS4 family protein complement(2430522..2431625) Flexistipes sinusarabici DSM 4947 10816605 YP_004604455.1 CDS Flexsi_2270 NC_015672.1 2431712 2432197 R InterPro IPR005243; KEGG: dap:Dacet_2260 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: Redox-active disulphide protein 2; transposase, IS4 family protein complement(2431712..2432197) Flexistipes sinusarabici DSM 4947 10816606 YP_004604456.1 CDS Flexsi_2271 NC_015672.1 2432566 2432811 R TIGRFAM: small redox-active disulfide protein 2; COGs: COG0701 permease; InterPro IPR005524; KEGG: cni:Calni_0175 permease; PFAM: Protein of unknown function DUF318, transmembrane; SPTR: Permease; redox-active disulfide protein 2 complement(2432566..2432811) Flexistipes sinusarabici DSM 4947 10816607 YP_004604457.1 CDS Flexsi_2272 NC_015672.1 2432881 2434047 R PFAM: Predicted permease; manually curated; hypothetical protein complement(2432881..2434047) Flexistipes sinusarabici DSM 4947 10816608 YP_004604458.1 CDS Flexsi_2274 NC_015672.1 2435576 2435995 R PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: ddf:DEFDS_0498 hypothetical protein; PFAM: Oxidoreductase, molybdopterin binding; SPTR: Putative uncharacterized protein; protein tyrosine phosphatase complement(2435576..2435995) Flexistipes sinusarabici DSM 4947 10816610 YP_004604459.1 CDS Flexsi_2275 NC_015672.1 2436580 2437185 D PFAM: Oxidoreductase molybdopterin binding domain; COGs: COG3153 acetyltransferase; InterPro IPR000182; KEGG: chl:Chy400_3399 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Probable acetyltransferase; oxidoreductase molybdopterin binding protein 2436580..2437185 Flexistipes sinusarabici DSM 4947 10816611 YP_004604460.1 CDS Flexsi_2276 NC_015672.1 2437362 2437892 R PFAM: Acetyltransferase (GNAT) family; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding; N-acetyltransferase GCN5 complement(2437362..2437892) Flexistipes sinusarabici DSM 4947 10816612 YP_004604461.1 CDS Flexsi_2277 NC_015672.1 2437962 2438420 R PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR004839; KEGG: dap:Dacet_2893 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family with aminotransferase domain; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein complement(2437962..2438420) Flexistipes sinusarabici DSM 4947 10816613 YP_004604462.1 CDS Flexsi_2278 NC_015672.1 2438438 2439856 R PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; This gene is disrupted by insertion of repetitive element; manually curated; GntR family transcriptional regulator complement(2438438..2439856) Flexistipes sinusarabici DSM 4947 10816614 YP_004604463.1 CDS Flexsi_2280 NC_015672.1 2440378 2440863 D COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase, IS4 family protein 2440378..2440863 Flexistipes sinusarabici DSM 4947 10816615 YP_004604464.1 CDS Flexsi_2281 NC_015672.1 2440950 2442053 D PFAM: Transposase DDE domain; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: rpc:RPC_4479 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Short chain enoyl-CoA hydratase; transposase IS4 family protein 2440950..2442053 Flexistipes sinusarabici DSM 4947 10816616 YP_004604465.1 CDS Flexsi_2282 NC_015672.1 2443058 2443810 D PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: pmo:Pmob_1584 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II; PRIAM: Aromatic-amino-acid transaminase; SPTR: Putative transcriptional regulator, GntR family; enoyl-CoA hydratase/isomerase 2443058..2443810 Flexistipes sinusarabici DSM 4947 10816617 YP_004604466.1 CDS Flexsi_2283 NC_015672.1 2443803 2445050 D PFAM: Aminotransferase class I and II; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: mmw:Mmwyl1_1368 DinB family protein; PFAM: DinB; SPTR: DinB family protein; GntR family transcriptional regulator 2443803..2445050 Flexistipes sinusarabici DSM 4947 10816618 YP_004604467.1 CDS Flexsi_2284 NC_015672.1 2445001 2445519 D PFAM: DinB family; InterPro IPR000620; KEGG: kse:Ksed_04860 membrane protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Integral membrane protein DUF6; DinB family protein 2445001..2445519 Flexistipes sinusarabici DSM 4947 10816619 YP_004604468.1 CDS Flexsi_2285 NC_015672.1 2445752 2446666 D PFAM: EamA-like transporter family; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014:IPR013767:IPR013655:IPR001610; KEGG: dal:Dalk_3934 histidine kinase; PFAM: PAS fold; PAS fold-3; SMART: PAS; PAC motif; SPTR: Histidine kinase; TIGRFAM: PAS; hypothetical protein 2445752..2446666 Flexistipes sinusarabici DSM 4947 10816620 YP_004604469.1 CDS Flexsi_2286 NC_015672.1 2447002 2448789 D PFAM: CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: pmx:PERMA_1548 sensor histidine kinase/response regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: ATP-binding region, ATPase-like:Histidine kinase A-like; putative PAS/PAC sensor protein 2447002..2448789 Flexistipes sinusarabici DSM 4947 10816621 YP_004604470.1 CDS Flexsi_2287 NC_015672.1 2448838 2449818 D PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR012902; KEGG: gme:Gmet_1399 N-terminal methylation; SPTR: N-terminal methylation; integral membrane sensor signal transduction histidine kinase 2448838..2449818 Flexistipes sinusarabici DSM 4947 10816622 YP_004604471.1 CDS Flexsi_2288 NC_015672.1 2450281 2450493 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; N-terminal methylation protein 2450281..2450493 Flexistipes sinusarabici DSM 4947 10816623 YP_004604472.1 CDS Flexsi_2289 NC_015672.1 2450462 2450848 D InterPro IPR007016; KEGG: emi:Emin_1087 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; hypothetical protein 2450462..2450848 Flexistipes sinusarabici DSM 4947 10816624 YP_004604473.1 CDS Flexsi_2290 NC_015672.1 2450864 2452693 D PFAM: O-Antigen ligase; InterPro IPR012902; KEGG: gme:Gmet_1399 N-terminal methylation; SPTR: N-terminal methylation; O-antigen polymerase 2450864..2452693 Flexistipes sinusarabici DSM 4947 10816625 YP_004604474.1 CDS Flexsi_2291 NC_015672.1 2452805 2453029 D PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 2452805..2453029 Flexistipes sinusarabici DSM 4947 10816626 YP_004604475.1 CDS Flexsi_2292 NC_015672.1 2453275 2453898 D hypothetical protein 2453275..2453898 Flexistipes sinusarabici DSM 4947 10816627 YP_004604476.1 CDS Flexsi_2293 NC_015672.1 2454826 2455464 D PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: ddf:DEFDS_1297 hypothetical protein; SPTR: Putative uncharacterized protein; ribulose-phosphate 3-epimerase 2454826..2455464 Flexistipes sinusarabici DSM 4947 10816629 YP_004604477.1 CDS Flexsi_2294 NC_015672.1 2455466 2455663 R manually curated; hypothetical protein complement(2455466..2455663) Flexistipes sinusarabici DSM 4947 10816630 YP_004604478.1 CDS Flexsi_2296 NC_015672.1 2456565 2457884 R COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638:IPR008258; KEGG: dol:Dole_2596 putative transglycosylase; PFAM: Extracellular solute-binding protein, family 3; Lytic transglycosylase-like, catalytic; SMART: Extracellular solute-binding protein, family 3; SPTR: Membrane-bound lytic murein transglycosylase F; hypothetical protein complement(2456565..2457884) Flexistipes sinusarabici DSM 4947 10816632 YP_004604479.1 CDS Flexsi_2297 NC_015672.1 2458284 2459648 R PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; ABC transporter periplasmic subunit complement(2458284..2459648) Flexistipes sinusarabici DSM 4947 10816633 YP_004604480.1 CDS Flexsi_2298 NC_015672.1 2460203 2461216 R PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: cni:Calni_1408 abc-1 domain-containing protein; PFAM: ABC-1; SPTR: ABC-1 domain-containing protein; transposase IS116/IS110/IS902 family protein complement(2460203..2461216) Flexistipes sinusarabici DSM 4947 10816634 YP_004604481.1 CDS Flexsi_2299 NC_015672.1 2461751 2463430 D PFAM: ABC1 family; COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR011108; KEGG: ddf:DEFDS_0408 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Putative uncharacterized protein; ABC-1 domain-containing protein 2461751..2463430 Flexistipes sinusarabici DSM 4947 10816635 YP_004604482.1 CDS Flexsi_2300 NC_015672.1 2463430 2465058 D PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Undecaprenyl-diphosphatase; InterPro IPR003824; KEGG: cni:Calni_1410 bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; RNA-metabolising metallo-beta-lactamase 2463430..2465058 Flexistipes sinusarabici DSM 4947 10816636 YP_004604483.1 CDS Flexsi_2301 NC_015672.1 2465049 2465840 D PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: dap:Dacet_2755 cell division FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase, AAA+ type, core; SPTR: Cell division FtsK/SpoIIIE; undecaprenyl-diphosphatase 2465049..2465840 Flexistipes sinusarabici DSM 4947 10816637 YP_004604484.1 CDS Flexsi_2302 NC_015672.1 2465831 2467975 D PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135; KEGG: cni:Calni_0761 dihydroorotate oxidase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; SPTR: Dihydroorotate oxidase; cell division protein FtsK 2465831..2467975 Flexistipes sinusarabici DSM 4947 10816638 YP_004604485.1 CDS Flexsi_2303 NC_015672.1 2467993 2468970 D PFAM: Dihydroorotate dehydrogenase; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050:IPR007197; KEGG: ddf:DEFDS_0011 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; TIGRFAM: menaquinone biosynthesis protein; FO synthase, subunit 2; dihydroorotate oxidase 2467993..2468970 Flexistipes sinusarabici DSM 4947 10816639 YP_004604486.1 CDS Flexsi_2304 NC_015672.1 2469263 2470294 D PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family; COGs: COG0178 Excinuclease ATPase subunit; HAMAP: UvrABC system protein A; InterPro IPR004602:IPR003439; KEGG: ddf:DEFDS_0014 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC, A subunit; TIGRFAM: Excinuclease ABC, A subunit; menaquinone biosynthesis protein 2469263..2470294 Flexistipes sinusarabici DSM 4947 10816640 YP_004604487.1 CDS Flexsi_2305 NC_015672.1 2470439 2473264 D PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; UvrABC system protein A 2470439..2473264 Flexistipes sinusarabici DSM 4947 10816641 YP_004604488.1 CDS Flexsi_2306 NC_015672.1 2473245 2474960 D PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; InterPro IPR007452; KEGG: cni:Calni_2065 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; cell wall hydrolase/autolysin 2473245..2474960 Flexistipes sinusarabici DSM 4947 10816642 YP_004604489.1 CDS Flexsi_2307 NC_015672.1 2474960 2478376 D PFAM: Family of unknown function (DUF490); COGs: COG0729 Outer membrane protein; InterPro IPR010827:IPR000184; KEGG: cni:Calni_2066 surface antigen variable number repeat-containing protein; PFAM: Surface antigen variable number; Bacterial surface antigen (D15); SPTR: Surface antigen variable number repeat-containing protein; hypothetical protein 2474960..2478376 Flexistipes sinusarabici DSM 4947 10816643 YP_004604490.1 CDS Flexsi_2308 NC_015672.1 2478345 2480888 D PFAM: Surface antigen variable number repeat; Surface antigen; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: ddf:DEFDS_0018 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Peroxiredoxin; surface antigen variable number repeat-containing protein 2478345..2480888 Flexistipes sinusarabici DSM 4947 10816644 YP_004604491.1 CDS Flexsi_2309 NC_015672.1 2481773 2482366 D PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; KEGG: ddf:DEFDS_2073 hypothetical protein; SPTR: Putative uncharacterized protein; peroxiredoxin 2481773..2482366 Flexistipes sinusarabici DSM 4947 10816645 YP_004604492.1 CDS Flexsi_2310 NC_015672.1 2482592 2483308 R COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: ddf:DEFDS_2074 acetyl-CoA synthetase family protein; PFAM: AMP-dependent synthetase/ligase; PRIAM: Butyrate--CoA ligase; SPTR: Acetyl-CoA synthetase family protein; hypothetical protein complement(2482592..2483308) Flexistipes sinusarabici DSM 4947 10816646 YP_004604493.1 CDS Flexsi_2311 NC_015672.1 2483468 2485102 R PFAM: AMP-binding enzyme; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ddf:DEFDS_2076 enoyl-CoA hydratase/isomerase family protein; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase family protein; butyrate--CoA ligase complement(2483468..2485102) Flexistipes sinusarabici DSM 4947 10816647 YP_004604494.1 CDS Flexsi_2312 NC_015672.1 2485112 2485753 R PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: dap:Dacet_2933 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase complement(2485112..2485753) Flexistipes sinusarabici DSM 4947 10816648 YP_004604495.1 CDS Flexsi_2313 NC_015672.1 2485761 2486561 R PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG0469 Pyruvate kinase; InterPro IPR001697:IPR015793:IPR015794; KEGG: pmx:PERMA_0022 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; enoyl-CoA hydratase/isomerase complement(2485761..2486561) Flexistipes sinusarabici DSM 4947 10816649 YP_004604496.1 CDS Flexsi_2314 NC_015672.1 2486646 2488148 R PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006240:IPR000760; KEGG: nhl:Nhal_2283 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; pyruvate kinase complement(2486646..2488148) Flexistipes sinusarabici DSM 4947 10816650 YP_004604497.1 CDS Flexsi_2315 NC_015672.1 2488396 2489205 D PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; 3'(2'),5'-bisphosphate nucleotidase 2488396..2489205 Flexistipes sinusarabici DSM 4947 10816651 YP_004604498.1 CDS Flexsi_2316 NC_015672.1 2489599 2490918 D PFAM: Transposase DDE domain; KEGG: ddf:DEFDS_0045 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 2489599..2490918 Flexistipes sinusarabici DSM 4947 10816652 YP_004604499.1 CDS Flexsi_2317 NC_015672.1 2491220 2492131 D PFAM: Phosphate-starvation-inducible E; COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: Protein translocase subunit secA; InterProIPR000185:IPR011115:IPR011130:IPR001650:IPR 011116:IPR004027; KEGG: ddf:DEFDS_0046 preprotein translocase subunit A; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; DNA/RNA helicase, C-terminal; SecA Wing/Scaffold; SEC-C motif; SMART: DNA/RNA helicase, C-terminal; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein; hypothetical protein 2491220..2492131 Flexistipes sinusarabici DSM 4947 10816653 YP_004604500.1 CDS Flexsi_2318 NC_015672.1 2492128 2494710 D PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; This gene is disrupted by insertion of repetitive element; manually curated; protein translocase subunit secA 2492128..2494710 Flexistipes sinusarabici DSM 4947 10816654 YP_004604501.1 CDS Flexsi_2320 NC_015672.1 2495096 2496145 D PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR004488:IPR002523; KEGG: pca:Pcar_2713 magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; transposase IS4 family protein 2495096..2496145 Flexistipes sinusarabici DSM 4947 10816656 YP_004604502.1 CDS Flexsi_2321 NC_015672.1 2496644 2497723 R PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); manually curated; magnesium and cobalt transport protein CorA complement(2496644..2497723) Flexistipes sinusarabici DSM 4947 10816657 YP_004604503.1 CDS Flexsi_2323 NC_015672.1 2498359 2499819 R PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; menaquinone biosynthesis decarboxylase, SCO4490 family; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: ddf:DEFDS_1643 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase; menaquinone biosynthesis decarboxylase complement(2498359..2499819) Flexistipes sinusarabici DSM 4947 10816659 YP_004604504.1 CDS Flexsi_2324 NC_015672.1 2499855 2500535 R PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; KEGG: ddf:DEFDS_1646 hypothetical protein; SPTR: Putative uncharacterized protein; ubiquinone/menaquinone biosynthesis methyltransferase ubiE complement(2499855..2500535) Flexistipes sinusarabici DSM 4947 10816660 YP_004604505.1 CDS Flexsi_2325 NC_015672.1 2500648 2501016 R COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR010237:IPR006402:IPR005834; KEGG: ddf:DEFDS_1650 pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Pyrimidine 5'-nucleotidase; TIGRFAM: Pyrimidine 5-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; hypothetical protein complement(2500648..2501016) Flexistipes sinusarabici DSM 4947 10816661 YP_004604506.1 CDS Flexsi_2326 NC_015672.1 2501037 2501675 R TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; pyrimidine 5'-nucleotidase; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_1906 histidine triad family protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad family protein; pyrimidine 5'-nucleotidase complement(2501037..2501675) Flexistipes sinusarabici DSM 4947 10816662 YP_004604507.1 CDS Flexsi_2327 NC_015672.1 2501752 2502168 D PFAM: HIT domain; COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: 60 kDa chaperonin; InterPro IPR001844:IPR002423; KEGG: ddf:DEFDS_0240 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; histidine triad (HIT) protein 2501752..2502168 Flexistipes sinusarabici DSM 4947 10816663 YP_004604508.1 CDS Flexsi_2328 NC_015672.1 2502247 2503896 R PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10, subgroup; InterPro IPR001476:IPR020818; KEGG: cni:Calni_2033 chaperonin cpn10; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; 60 kDa chaperonin complement(2502247..2503896) Flexistipes sinusarabici DSM 4947 10816664 YP_004604509.1 CDS Flexsi_2329 NC_015672.1 2503911 2504201 R PFAM: Chaperonin 10 Kd subunit; COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit region; InterPro IPR004430:IPR001030; KEGG: cni:Calni_2034 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; 10 kDa chaperonin complement(2503911..2504201) Flexistipes sinusarabici DSM 4947 10816665 YP_004604510.1 CDS Flexsi_2330 NC_015672.1 2504429 2505817 D PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR004431:IPR000573; KEGG: cni:Calni_2035 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; 3-isopropylmalate dehydratase large subunit 2504429..2505817 Flexistipes sinusarabici DSM 4947 10816666 YP_004604511.1 CDS Flexsi_2331 NC_015672.1 2505829 2506434 D PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853:IPR010656; KEGG: cni:Calni_0389 trap transporter, 4tm/12tm fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; 3-isopropylmalate dehydratase small subunit 2505829..2506434 Flexistipes sinusarabici DSM 4947 10816667 YP_004604512.1 CDS Flexsi_2332 NC_015672.1 2506449 2508494 R PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ddf:DEFDS_1400 TRAP-type transporter substrate-binding protein; SPTR: TRAP-type transport system, substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter, 4TM/12TM fusion protein complement(2506449..2508494) Flexistipes sinusarabici DSM 4947 10816668 YP_004604513.1 CDS Flexsi_2333 NC_015672.1 2508585 2509586 R TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; KEGG: ddf:DEFDS_1401 hypothetical protein; SPTR: Putative uncharacterized protein; TRAP transporter solute receptor, TAXI family complement(2508585..2509586) Flexistipes sinusarabici DSM 4947 10816669 YP_004604514.1 CDS Flexsi_2334 NC_015672.1 2509795 2510709 R PFAM: ABC transporter substrate binding protein; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_1402 two-component system, NtrC family, response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, response regulator; hypothetical protein complement(2509795..2510709) Flexistipes sinusarabici DSM 4947 10816670 YP_004604515.1 CDS Flexsi_2335 NC_015672.1 2510706 2512082 R PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003660:IPR003661:IPR003594; KEGG: ddf:DEFDS_1403 hypothetical protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Putative uncharacterized protein; Fis family two component sigma-54 specific transcriptional regulator complement(2510706..2512082) Flexistipes sinusarabici DSM 4947 10816671 YP_004604516.1 CDS Flexsi_2336 NC_015672.1 2512069 2513790 R PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: ddf:DEFDS_1547 solute:sodium symporter; PFAM: Sodium/solute symporter; SPTR: Solute:sodium symporter; integral membrane sensor signal transduction histidine kinase complement(2512069..2513790) Flexistipes sinusarabici DSM 4947 10816672 YP_004604517.1 CDS Flexsi_2337 NC_015672.1 2513885 2515162 D PFAM: Sodium:solute symporter family; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: gbm:Gbem_3789 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; Na+/solute symporter 2513885..2515162 Flexistipes sinusarabici DSM 4947 10816673 YP_004604518.1 CDS Flexsi_2338 NC_015672.1 2515239 2516684 R PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0004 Ammonia permease; InterPro IPR019879:IPR001905; KEGG: hel:HELO_1099 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Probable ammonium transporter, marine subtype; Ammonium transporter; glyceraldehyde-3-phosphate dehydrogenase, type I complement(2515239..2516684) Flexistipes sinusarabici DSM 4947 10816674 YP_004604519.1 CDS Flexsi_2339 NC_015672.1 2516885 2518138 R PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: geo:Geob_1818 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; ammonium transporter complement(2516885..2518138) Flexistipes sinusarabici DSM 4947 10816675 YP_004604520.1 CDS Flexsi_2340 NC_015672.1 2518142 2518501 R PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II complement(2518142..2518501) Flexistipes sinusarabici DSM 4947 10816676 YP_004604521.1 CDS Flexsi_2341 NC_015672.1 2519009 2519242 D COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone protein dnaJ; InterPro IPR012724:IPR001623:IPR001305:IPR002939; KEGG: cni:Calni_0253 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ 2; TIGRFAM: Chaperone DnaJ; hypothetical protein 2519009..2519242 Flexistipes sinusarabici DSM 4947 10816677 YP_004604522.1 CDS Flexsi_2342 NC_015672.1 2519392 2520528 R PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: ddf:DEFDS_2114 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; chaperone protein dnaJ complement(2519392..2520528) Flexistipes sinusarabici DSM 4947 10816678 YP_004604523.1 CDS Flexsi_2343 NC_015672.1 2520750 2522711 R PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; Fe-S protein assembly chaperone HscA; COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: ddf:DEFDS_2115 molecular chaperone GrpE; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; chaperone protein dnaK complement(2520750..2522711) Flexistipes sinusarabici DSM 4947 10816679 YP_004604524.1 CDS Flexsi_2344 NC_015672.1 2522704 2523354 R PFAM: GrpE; COGs: COG1420 Transcriptional regulator of heat shock gene; HAMAP: Negative regulator of class I heat shock protein; InterPro IPR002571; KEGG: cni:Calni_0250 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; SPTR: Heat-inducible transcription repressor hrcA; TIGRFAM: Negative regulator of class I heat shock protein; protein grpE complement(2522704..2523354) Flexistipes sinusarabici DSM 4947 10816680 YP_004604525.1 CDS Flexsi_2345 NC_015672.1 2523344 2524393 R PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: ddf:DEFDS_2013 hypothetical protein; PFAM: Protein of unknown function DUF72; SPTR: Putative uncharacterized protein; heat-inducible transcription repressor HrcA complement(2523344..2524393) Flexistipes sinusarabici DSM 4947 10816681 YP_004604526.1 CDS Flexsi_2346 NC_015672.1 2524665 2525453 R PFAM: Protein of unknown function DUF72; KEGG: mfv:Mfer_0339 smc domain protein; hypothetical protein complement(2524665..2525453) Flexistipes sinusarabici DSM 4947 10816682 YP_004604527.1 CDS Flexsi_2347 NC_015672.1 2525595 2526242 D Signal predicted by SignalP 3.0 HMM; IMG reference gene:2505696881_SP; hypothetical protein 2525595..2526242 Flexistipes sinusarabici DSM 4947 10816683 Flexsi_R0001 tRNA Flexsi_R0001 NC_015672.1 324260 324344 D tRNA-Leu 324260..324344 Flexistipes sinusarabici DSM 4947 10814591 Flexsi_R0002 tRNA Flexsi_R0002 NC_015672.1 437661 437749 D tRNA-Leu 437661..437749 Flexistipes sinusarabici DSM 4947 10814701 Flexsi_R0003 tRNA Flexsi_R0003 NC_015672.1 476715 476787 D tRNA-Thr 476715..476787 Flexistipes sinusarabici DSM 4947 10814736 Flexsi_R0004 tRNA Flexsi_R0004 NC_015672.1 476794 476876 D tRNA-Tyr 476794..476876 Flexistipes sinusarabici DSM 4947 10814737 Flexsi_R0005 tRNA Flexsi_R0005 NC_015672.1 476882 476955 D tRNA-Gly 476882..476955 Flexistipes sinusarabici DSM 4947 10814738 Flexsi_R0006 tRNA Flexsi_R0006 NC_015672.1 477029 477102 D tRNA-Thr 477029..477102 Flexistipes sinusarabici DSM 4947 10814739 Flexsi_R0007 tRNA Flexsi_R0007 NC_015672.1 478481 478556 D tRNA-Trp 478481..478556 Flexistipes sinusarabici DSM 4947 10814742 Flexsi_R0009 tRNA Flexsi_R0009 NC_015672.1 637495 637569 R tRNA-Asp complement(637495..637569) Flexistipes sinusarabici DSM 4947 10814915 Flexsi_R0010 tRNA Flexsi_R0010 NC_015672.1 637582 637654 R tRNA-Val complement(637582..637654) Flexistipes sinusarabici DSM 4947 10814916 Flexsi_R0011 tRNA Flexsi_R0011 NC_015672.1 637679 637753 R tRNA-Glu complement(637679..637753) Flexistipes sinusarabici DSM 4947 10814917 Flexsi_R0012 tRNA Flexsi_R0012 NC_015672.1 637784 637856 R tRNA-Lys complement(637784..637856) Flexistipes sinusarabici DSM 4947 10814918 Flexsi_R0013 tRNA Flexsi_R0013 NC_015672.1 796630 796702 D tRNA-Gly 796630..796702 Flexistipes sinusarabici DSM 4947 10815060 Flexsi_R0014 tRNA Flexsi_R0014 NC_015672.1 845708 845781 D tRNA-Pro 845708..845781 Flexistipes sinusarabici DSM 4947 10815099 Flexsi_R0015 tRNA Flexsi_R0015 NC_015672.1 1058280 1058353 D tRNA-Met 1058280..1058353 Flexistipes sinusarabici DSM 4947 10815295 Flexsi_R0016 tRNA Flexsi_R0016 NC_015672.1 1156866 1156953 R tRNA-Ser complement(1156866..1156953) Flexistipes sinusarabici DSM 4947 10815398 Flexsi_R0017 tRNA Flexsi_R0017 NC_015672.1 1204839 1204911 D tRNA-Thr 1204839..1204911 Flexistipes sinusarabici DSM 4947 10815437 Flexsi_R0018 tRNA Flexsi_R0018 NC_015672.1 1249423 1249496 R tRNA-Pro complement(1249423..1249496) Flexistipes sinusarabici DSM 4947 10815481 Flexsi_R0019 tRNA Flexsi_R0019 NC_015672.1 1252671 1252744 R tRNA-Arg complement(1252671..1252744) Flexistipes sinusarabici DSM 4947 10815485 Flexsi_R0020 tRNA Flexsi_R0020 NC_015672.1 1252827 1252899 R tRNA-Arg complement(1252827..1252899) Flexistipes sinusarabici DSM 4947 10815486 Flexsi_R0021 tRNA Flexsi_R0021 NC_015672.1 1335633 1335706 R tRNA-Arg complement(1335633..1335706) Flexistipes sinusarabici DSM 4947 10815561 Flexsi_R0022 tRNA Flexsi_R0022 NC_015672.1 1347631 1347706 R tRNA-Phe complement(1347631..1347706) Flexistipes sinusarabici DSM 4947 10815574 Flexsi_R0023 tRNA Flexsi_R0023 NC_015672.1 1347767 1347838 R tRNA-Cys complement(1347767..1347838) Flexistipes sinusarabici DSM 4947 10815575 Flexsi_R0025 tRNA Flexsi_R0025 NC_015672.1 1488838 1488912 R tRNA-Gln complement(1488838..1488912) Flexistipes sinusarabici DSM 4947 10815701 Flexsi_R0026 tRNA Flexsi_R0026 NC_015672.1 1497325 1497397 R tRNA-Gly complement(1497325..1497397) Flexistipes sinusarabici DSM 4947 10815708 Flexsi_R0028 tRNA Flexsi_R0028 NC_015672.1 1739737 1739825 R tRNA-Leu complement(1739737..1739825) Flexistipes sinusarabici DSM 4947 10815929 Flexsi_R0029 tRNA Flexsi_R0029 NC_015672.1 1740566 1740639 D tRNA-Pro 1740566..1740639 Flexistipes sinusarabici DSM 4947 10815931 Flexsi_R0030 tRNA Flexsi_R0030 NC_015672.1 1764005 1764094 R tRNA-Ser complement(1764005..1764094) Flexistipes sinusarabici DSM 4947 10815953 Flexsi_R0031 tRNA Flexsi_R0031 NC_015672.1 1764129 1764218 R tRNA-Ser complement(1764129..1764218) Flexistipes sinusarabici DSM 4947 10815954 Flexsi_R0032 tRNA Flexsi_R0032 NC_015672.1 1765506 1765578 D tRNA-Asn 1765506..1765578 Flexistipes sinusarabici DSM 4947 10815956 Flexsi_R0033 tRNA Flexsi_R0033 NC_015672.1 1770035 1770107 D tRNA-Ala 1770035..1770107 Flexistipes sinusarabici DSM 4947 10815961 Flexsi_R0035 tRNA Flexsi_R0035 NC_015672.1 1983064 1983140 D tRNA-Met 1983064..1983140 Flexistipes sinusarabici DSM 4947 10816175 Flexsi_R0036 tRNA Flexsi_R0036 NC_015672.1 1983188 1983261 D tRNA-Met 1983188..1983261 Flexistipes sinusarabici DSM 4947 10816176 Flexsi_R0037 tRNA Flexsi_R0037 NC_015672.1 1990006 1990095 D tRNA-Ser 1990006..1990095 Flexistipes sinusarabici DSM 4947 10816185 Flexsi_R0038 tRNA Flexsi_R0038 NC_015672.1 2011291 2011362 R tRNA-Val complement(2011291..2011362) Flexistipes sinusarabici DSM 4947 10816209 Flexsi_R0041 tRNA Flexsi_R0041 NC_015672.1 2111836 2111908 R tRNA-Ala complement(2111836..2111908) Flexistipes sinusarabici DSM 4947 10816304 Flexsi_R0042 tRNA Flexsi_R0042 NC_015672.1 2111983 2112056 R tRNA-Ile complement(2111983..2112056) Flexistipes sinusarabici DSM 4947 10816305 Flexsi_R0046 tRNA Flexsi_R0046 NC_015672.1 2249647 2249719 R tRNA-Ala complement(2249647..2249719) Flexistipes sinusarabici DSM 4947 10816424 Flexsi_R0047 tRNA Flexsi_R0047 NC_015672.1 2249794 2249867 R tRNA-Ile complement(2249794..2249867) Flexistipes sinusarabici DSM 4947 10816425 Flexsi_R0049 tRNA Flexsi_R0049 NC_015672.1 2275117 2275200 D tRNA-Leu 2275117..2275200 Flexistipes sinusarabici DSM 4947 10816457 Flexsi_R0050 tRNA Flexsi_R0050 NC_015672.1 2286253 2286325 R tRNA-Gly complement(2286253..2286325) Flexistipes sinusarabici DSM 4947 10816467 Flexsi_R0051 tRNA Flexsi_R0051 NC_015672.1 2286367 2286447 R tRNA-Leu complement(2286367..2286447) Flexistipes sinusarabici DSM 4947 10816468 Flexsi_R0052 tRNA Flexsi_R0052 NC_015672.1 2286463 2286536 R tRNA-His complement(2286463..2286536) Flexistipes sinusarabici DSM 4947 10816469 Flexsi_R0053 tRNA Flexsi_R0053 NC_015672.1 2286544 2286617 R tRNA-Arg complement(2286544..2286617) Flexistipes sinusarabici DSM 4947 10816470 Flexsi_R0054 tRNA Flexsi_R0054 NC_015672.1 2454040 2454136 R tRNA-Sec complement(2454040..2454136) Flexistipes sinusarabici DSM 4947 10816628 Flexsi_R0039 rRNA Flexsi_R0039 NC_015672.1 2107950 2108067 R 5S ribosomal RNA complement(2107950..2108067) Flexistipes sinusarabici DSM 4947 10816302 Flexsi_R0040 rRNA Flexsi_R0040 NC_015672.1 2108123 2111771 R 23S ribosomal RNA complement(2108123..2111771) Flexistipes sinusarabici DSM 4947 10816303 Flexsi_R0043 rRNA Flexsi_R0043 NC_015672.1 2112179 2113719 R 16S ribosomal RNA complement(2112179..2113719) Flexistipes sinusarabici DSM 4947 10816306 Flexsi_R0044 rRNA Flexsi_R0044 NC_015672.1 2245761 2245878 R 5S ribosomal RNA complement(2245761..2245878) Flexistipes sinusarabici DSM 4947 10816422 Flexsi_R0045 rRNA Flexsi_R0045 NC_015672.1 2245934 2249582 R 23S ribosomal RNA complement(2245934..2249582) Flexistipes sinusarabici DSM 4947 10816423 Flexsi_R0048 rRNA Flexsi_R0048 NC_015672.1 2249990 2251530 R 16S ribosomal RNA complement(2249990..2251530) Flexistipes sinusarabici DSM 4947 10816426