-- dump date 20140619_094251 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_004602267.1 336322300 10816684 80..1414 1 NC_015672.1 PFAM: domain; Bacterial dnaA protein; TIGRFAM: chromosomal replication initiator protein DnaA; COGs: COG0592 DNA polymerase sliding clamp subunit (PCNA homolog); InterPro IPR001001; KEGG: dap:Dacet_2869 DNA polymerase III, beta subunit; PFAM: DNA polymerase III, beta chain; PRIAM: DNA-directed DNA polymerase; SMART: DNA polymerase III, beta chain; SPTR: DNA polymerase III, beta subunit; TIGRFAM: DNA polymerase III, beta chain; chromosomal replication initiator protein dnaA 1414 10816684 Flexsi_0001 Flexistipes sinusarabici DSM 4947 chromosomal replication initiator protein dnaA YP_004602267.1 80 D 717231 CDS YP_004602268.1 336322301 10814288 1691..2797 1 NC_015672.1 PFAM: DNA polymerase III beta subunit, C-terminal domain; DNA polymerase III beta subunit, N-terminal domain; DNA polymerase III beta subunit, central domain; TIGRFAM: DNA polymerase III, beta subunit; COGs: COG1195 Recombinational DNA repair ATPase (RecF pathway); HAMAP: DNA replication and repair protein recF; KEGG: cni:Calni_0004 smc domain protein; SPTR: SMC domain protein; DNA polymerase III subunit beta 2797 10814288 Flexsi_0002 Flexistipes sinusarabici DSM 4947 DNA polymerase III subunit beta YP_004602268.1 1691 D 717231 CDS YP_004602269.1 336322302 10814289 2816..3838 1 NC_015672.1 PFAM: RecF/RecN/SMC N terminal domain; COGs: COG0187 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) B subunit; InterProIPR011557:IPR003594:IPR001241:IPR013506:IPR 006171:IPR002288; KEGG: cni:Calni_0005 DNA gyrase subunit B; PFAM: DNA topoisomerase, type IIA, subunit B, region 2; ATP-binding region, ATPase-like; Toprim domain; DNA topoisomerase, type IIA, subunit B, C-terminal; SMART: DNA topoisomerase, type IIA, subunit B or N-terminal; ATP-binding region, ATPase-like; SPTR: DNA gyrase subunit B; TIGRFAM: DNA gyrase, subunit B; DNA replication and repair protein RecF 3838 10814289 Flexsi_0003 Flexistipes sinusarabici DSM 4947 DNA replication and repair protein RecF YP_004602269.1 2816 D 717231 CDS YP_004602270.1 336322303 10814290 3926..6298 1 NC_015672.1 PFAM: Toprim domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; DNA gyrase B; DNA gyrase B subunit, carboxyl terminus; TIGRFAM: DNA gyrase, B subunit; COGs: COG0188 Type IIA topoisomerase (DNA gyrase/topo II topoisomerase IV) A subunit; InterPro IPR005743:IPR002205:IPR006691; KEGG: cni:Calni_0006 DNA gyrase subunit A; PFAM: DNA topoisomerase, type IIA, subunit A or C-terminal; DNA gyrase/topoisomerase IV, subunit A, C-terminal beta-pinwheel; PRIAM: DNA topoisomerase (ATP-hydrolyzing); SMART: DNA topoisomerase, type IIA, subunit A or C-terminal; SPTR: DNA gyrase subunit A; TIGRFAM: DNA gyrase, subunit A; DNA gyrase subunit B 6298 10814290 Flexsi_0004 Flexistipes sinusarabici DSM 4947 DNA gyrase subunit B YP_004602270.1 3926 D 717231 CDS YP_004602271.1 336322304 10814291 6311..8722 1 NC_015672.1 PFAM: DNA gyrase/topoisomerase IV, subunit A; DNA gyrase C-terminal domain, beta-propeller; TIGRFAM: DNA gyrase, A subunit; COGs: COG0190 5 10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase; HAMAP: Tetrahydrofolate dehydrogenase/cyclohydrolase; InterPro IPR000672:IPR020630:IPR020631; KEGG: cni:Calni_0007 5,10-methylenetetrahydrofolate dehydrogenase (nadp+); methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; PRIAM: Methylenetetrahydrofolate dehydrogenase (NADP(+)); SPTR: Bifunctional protein folD; DNA gyrase subunit A 8722 10814291 Flexsi_0005 Flexistipes sinusarabici DSM 4947 DNA gyrase subunit A YP_004602271.1 6311 D 717231 CDS YP_004602272.1 336322305 10814292 8723..9574 1 NC_015672.1 PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; COGs: COG0486 GTPase; HAMAP: tRNA modification GTPase TrmE; InterPro IPR004520:IPR005225:IPR018948:IPR002917; KEGG: ddf:DEFDS_0006 tRNA modification GTPase TrmE; PFAM: GTP-binding protein TrmE, N-terminal; GTP-binding protein, HSR1-related; SPTR: tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; Small GTP-binding protein; bifunctional protein folD 9574 10814292 Flexsi_0006 Flexistipes sinusarabici DSM 4947 bifunctional protein folD YP_004602272.1 8723 D 717231 CDS YP_004602273.1 336322306 10814293 9574..10932 1 NC_015672.1 PFAM: GTPase of unknown function; GTP-binding protein TrmE N-terminus; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein domain; COGs: COG0445 NAD/FAD-utilizing enzyme apparently involved in cell division; HAMAP: Glucose-inhibited division protein A; InterPro IPR004416:IPR002218; KEGG: ddf:DEFDS_0007 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; SPTR: tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG; TIGRFAM: Glucose-inhibited division protein A; tRNA modification GTPase mnmE 10932 10814293 Flexsi_0007 Flexistipes sinusarabici DSM 4947 tRNA modification GTPase mnmE YP_004602273.1 9574 D 717231 CDS YP_004602274.1 336322307 10814294 11327..13201 1 NC_015672.1 PFAM: Glucose inhibited division protein A; TIGRFAM: glucose-inhibited division protein A; COGs: COG0357 S-adenosylmethionine-dependent methyltransferase involved in cell division; HAMAP: rRNA small subunit methyltransferase G; InterPro IPR003682; KEGG: ddf:DEFDS_0008 glucose inhibited division protein B; PFAM: rRNA small subunit methyltransferase G; SPTR: Ribosomal RNA small subunit methyltransferase G; TIGRFAM: rRNA small subunit methyltransferase G; tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG 13201 10814294 Flexsi_0008 Flexistipes sinusarabici DSM 4947 tRNA uridine 5-carboxymethylaminomethyl modification protein MnmG YP_004602274.1 11327 D 717231 CDS YP_004602275.1 336322308 10814295 13188..13784 1 NC_015672.1 PFAM: rRNA small subunit methyltransferase G; TIGRFAM: 16S rRNA (guanine(527)-N(7))-methyltransferase GidB; KEGG: ddf:DEFDS_0009 hypothetical protein; SPTR: Putative uncharacterized protein; ribosomal RNA small subunit methyltransferase G 13784 10814295 Flexsi_0009 Flexistipes sinusarabici DSM 4947 ribosomal RNA small subunit methyltransferase G YP_004602275.1 13188 D 717231 CDS YP_004602276.1 336322309 10814296 13729..15189 1 NC_015672.1 COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR001450; KEGG: ddf:DEFDS_0264 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin; hypothetical protein 15189 10814296 Flexsi_0010 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602276.1 13729 D 717231 CDS YP_004602277.1 336322310 10814297 complement(15368..16438) 1 NC_015672.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: ddf:DEFDS_0263 nitroreductase family protein; PFAM: Nitroreductase-like; SPTR: Nitroreductase family protein; 4Fe-4S ferredoxin 16438 10814297 Flexsi_0011 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004602277.1 15368 R 717231 CDS YP_004602278.1 336322311 10814298 16496..17002 1 NC_015672.1 PFAM: Nitroreductase family; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: ddf:DEFDS_2106 IclR family transcriptional regulator; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; nitroreductase 17002 10814298 Flexsi_0012 Flexistipes sinusarabici DSM 4947 nitroreductase YP_004602278.1 16496 D 717231 CDS YP_004602279.1 336322312 10814299 17118..17894 1 NC_015672.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG1607 Acyl-CoA hydrolase; InterPro IPR006683; KEGG: cni:Calni_0449 thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; IclR family transcriptional regulator 17894 10814299 Flexsi_0013 Flexistipes sinusarabici DSM 4947 IclR family transcriptional regulator YP_004602279.1 17118 D 717231 CDS YP_004602280.1 336322313 10814300 17900..18298 1 NC_015672.1 PFAM: Thioesterase superfamily; COGs: COG0750 membrane-associated Zn-dependent protease 1; InterPro IPR004387:IPR001478:IPR008915; KEGG: cni:Calni_1998 site-2 protease; PFAM: Peptidase M50; PDZ/DHR/GLGF; SMART: PDZ/DHR/GLGF; SPTR: Site-2 protease; TIGRFAM: Peptidase M50, putative membrane-associated zinc metallopeptidase; thioesterase superfamily protein 18298 10814300 Flexsi_0014 Flexistipes sinusarabici DSM 4947 thioesterase superfamily protein YP_004602280.1 17900 D 717231 CDS YP_004602281.1 336322314 10814301 complement(18290..19351) 1 NC_015672.1 PFAM: Peptidase family M50; PDZ domain (Also known as DHR or GLGF); TIGRFAM: RIP metalloprotease RseP; COGs: COG0743 1-deoxy-D-xylulose 5-phosphate reductoisomerase; HAMAP: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro IPR003821:IPR013512:IPR013644; KEGG: cni:Calni_1999 1-deoxy-D-xylulose 5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase, C-terminal; 1-deoxy-D-xylulose 5-phosphate reductoisomerase, N-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate reductoisomerase; SPTR: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; membrane-associated zinc metalloprotease 19351 10814301 Flexsi_0015 Flexistipes sinusarabici DSM 4947 membrane-associated zinc metalloprotease YP_004602281.1 18290 R 717231 CDS YP_004602282.1 336322315 10814302 complement(19355..20509) 1 NC_015672.1 PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; COGs: COG4589 CDP-diglyceride synthetase/phosphatidate cytidylyltransferase; InterPro IPR000374; KEGG: ddf:DEFDS_0122 phosphatidate cytidylyltransferase; PFAM: Phosphatidate cytidylyltransferase; SPTR: Phosphatidate cytidylyltransferase; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 20509 10814302 Flexsi_0016 Flexistipes sinusarabici DSM 4947 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_004602282.1 19355 R 717231 CDS YP_004602283.1 336322316 10814303 complement(20506..21306) 1 NC_015672.1 PFAM: Cytidylyltransferase family; COGs: COG0020 Undecaprenyl pyrophosphate synthase; HAMAP: Undecaprenyl pyrophosphate synthase; InterPro IPR001441; KEGG: ddf:DEFDS_0121 undecaprenyl pyrophosphate synthetase; PFAM:Di-trans-poly-cis-decaprenylcistransferase-lik e; PRIAM: Di-trans,poly-cis-decaprenylcistransferase; SPTR: Undecaprenyl pyrophosphate synthetase; TIGRFAM:Di-trans-poly-cis-decaprenylcistransferase- like; phosphatidate cytidylyltransferase 21306 10814303 Flexsi_0017 Flexistipes sinusarabici DSM 4947 phosphatidate cytidylyltransferase YP_004602283.1 20506 R 717231 CDS YP_004602284.1 336322317 10814304 complement(21321..22037) 1 NC_015672.1 PFAM: Putative undecaprenyl diphosphate synthase; TIGRFAM: undecaprenyl diphosphate synthase; COGs: COG0233 Ribosome recycling factor; HAMAP: Ribosome recycling factor, bacterial-like; InterPro IPR002661:IPR015998; KEGG: ddf:DEFDS_0120 ribosome recycling factor Frr; PFAM: Ribosome recycling factor; SPTR: Ribosome-recycling factor; TIGRFAM: Ribosome recycling factor; undecaprenyl pyrophosphate synthase 22037 10814304 Flexsi_0018 Flexistipes sinusarabici DSM 4947 undecaprenyl pyrophosphate synthase YP_004602284.1 21321 R 717231 CDS YP_004602285.1 336322318 10814305 complement(22037..22594) 1 NC_015672.1 PFAM: Ribosome recycling factor; TIGRFAM: ribosome recycling factor; COGs: COG0528 Uridylate kinase; InterPro IPR015963:IPR001048; KEGG: cni:Calni_2003 uridylate kinase; PFAM: Aspartate/glutamate/uridylate kinase; SPTR: Uridylate kinase; TIGRFAM: Uridylate kinase, bacteria; ribosome-recycling factor 22594 10814305 Flexsi_0019 Flexistipes sinusarabici DSM 4947 ribosome-recycling factor YP_004602285.1 22037 R 717231 CDS YP_004602286.1 336322319 10814306 complement(22599..23312) 1 NC_015672.1 PFAM: Amino acid kinase family; TIGRFAM: uridylate kinase; KEGG: ddf:DEFDS_0118 hypothetical protein; SPTR: Putative uncharacterized protein; uridylate kinase 23312 10814306 Flexsi_0020 Flexistipes sinusarabici DSM 4947 uridylate kinase YP_004602286.1 22599 R 717231 CDS YP_004602287.1 336322320 10814307 complement(23296..23652) 1 NC_015672.1 COGs: COG0681 Signal peptidase I; InterPro IPR000223:IPR019759; KEGG: ddf:DEFDS_0117 signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region; PRIAM: Signal peptidase I; SPTR: Signal peptidase I; TIGRFAM: Peptidase S26A, signal peptidase I; hypothetical protein 23652 10814307 Flexsi_0021 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602287.1 23296 R 717231 CDS YP_004602288.1 336322321 10814308 complement(23810..24394) 1 NC_015672.1 PFAM: Peptidase S24-like; TIGRFAM: signal peptidase I, bacterial type; COGs: COG0481 Membrane GTPase LepA; HAMAP: GTP-binding protein lepA; InterProIPR005225:IPR006297:IPR000795:IPR004161:IPR 000640:IPR013842; KEGG: ddf:DEFDS_0116 GTP-binding protein LepA; PFAM: GTP-binding protein LepA, C-terminal; Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor 4; TIGRFAM: GTP-binding protein LepA; Small GTP-binding protein; signal peptidase I 24394 10814308 Flexsi_0022 Flexistipes sinusarabici DSM 4947 signal peptidase I YP_004602288.1 23810 R 717231 CDS YP_004602289.1 336322322 10814309 complement(24406..26211) 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; GTP-binding protein LepA C-terminus; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein domain; COGs: COG1004 UDP-glucose 6-dehydrogenase; InterPro IPR017476:IPR001732:IPR014026:IPR014027; KEGG: ddf:DEFDS_0115 UDP-glucose 6-dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase, N-terminal; UDP-glucose/GDP-mannose dehydrogenase, dimerisation; UDP-glucose/GDP-mannose dehydrogenase, C-terminal; PRIAM: UDP-glucose 6-dehydrogenase; SPTR: UDP-glucose 6-dehydrogenase; TIGRFAM: Nucleotide sugar dehydrogenase; GTP-binding protein lepA 26211 10814309 Flexsi_0023 Flexistipes sinusarabici DSM 4947 GTP-binding protein lepA YP_004602289.1 24406 R 717231 CDS YP_004602290.1 336322323 10814310 complement(26222..27547) 1 NC_015672.1 PFAM: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; UDP-glucose/GDP-mannose dehydrogenase family, central domain; UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; TIGRFAM: nucleotide sugar dehydrogenase; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; nucleotide sugar dehydrogenase 27547 10814310 Flexsi_0024 Flexistipes sinusarabici DSM 4947 nucleotide sugar dehydrogenase YP_004602290.1 26222 R 717231 CDS YP_004602291.1 336322324 10814311 28272..29537 1 NC_015672.1 COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: toc:Toce_0299 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; transposase IS4 family protein 29537 10814311 Flexsi_0025 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602291.1 28272 D 717231 CDS YP_004602292.1 336322325 10814312 complement(29704..30390) 1 NC_015672.1 PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; IstB domain-containing protein ATP-binding protein 30390 10814312 Flexsi_0026 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004602292.1 29704 R 717231 CDS YP_004602293.1 336322326 10814313 complement(30377..31900) 1 NC_015672.1 PFAM: Integrase core domain; integrase catalytic subunit 31900 10814313 Flexsi_0027 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004602293.1 30377 R 717231 CDS YP_004602294.1 336322327 10814314 32078..32332 1 NC_015672.1 InterPro IPR001450; KEGG: ddf:DEFDS_0633 2-oxoacid oxidoreductase subunit delta; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 2-oxoacid oxidoreductase, delta subunit; hypothetical protein 32332 10814314 Flexsi_0028 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602294.1 32078 D 717231 CDS YP_004602295.1 336322328 10814315 32429..32659 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ddf:DEFDS_0634 2-oxoacid oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; PRIAM: 3-methyl-2-oxobutanoate dehydrogenase (ferredoxin); SPTR: 2-oxoacid oxidoreductase, alpha subunit; 4Fe-4S ferredoxin 32659 10814315 Flexsi_0029 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004602295.1 32429 D 717231 CDS YP_004602296.1 336322329 10814316 32652..33701 1 NC_015672.1 PFAM: domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: ddf:DEFDS_0635 2-oxoacid oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoacid oxidoreductase, beta subunit; 3-methyl-2-oxobutanoate dehydrogenase 33701 10814316 Flexsi_0030 Flexistipes sinusarabici DSM 4947 3-methyl-2-oxobutanoate dehydrogenase YP_004602296.1 32652 D 717231 CDS YP_004602297.1 336322330 10814317 33711..34457 1 NC_015672.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: ddf:DEFDS_0636 2-oxoacid oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; SPTR: 2-oxoacid oxidoreductase, gamma subunit; 2-oxoglutarate synthase 34457 10814317 Flexsi_0031 Flexistipes sinusarabici DSM 4947 2-oxoglutarate synthase YP_004602297.1 33711 D 717231 CDS YP_004602298.1 336322331 10814318 34457..35002 1 NC_015672.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; COGs: COG1254 Acylphosphatase; HAMAP: Acylphosphatase; InterPro IPR001792; KEGG: fpl:Ferp_1517 acylphosphatase; PFAM: Acylphosphatase-like; SPTR: Acylphosphatase; pyruvate/ketoisovalerate oxidoreductase 35002 10814318 Flexsi_0032 Flexistipes sinusarabici DSM 4947 pyruvate/ketoisovalerate oxidoreductase YP_004602298.1 34457 D 717231 CDS YP_004602299.1 336322332 10814319 35006..35278 1 NC_015672.1 PFAM: Acylphosphatase; COGs: COG0422 Thiamine biosynthesis protein ThiC; HAMAP: Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: ddf:DEFDS_1615 thiamine biosynthesis protein ThiC; PFAM: Thiamine biosynthesis protein ThiC; SPTR: Phosphomethylpyrimidine synthase; TIGRFAM: Thiamine biosynthesis protein ThiC; acylphosphatase 35278 10814319 Flexsi_0033 Flexistipes sinusarabici DSM 4947 acylphosphatase YP_004602299.1 35006 D 717231 CDS YP_004602300.1 336322333 10814320 35488..36753 1 NC_015672.1 PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0352 Thiamine monophosphate synthase; HAMAP: Thiamine-phosphate pyrophosphorylase; InterPro IPR003733; KEGG: cni:Calni_0756 thiamine-phosphate diphosphorylase; PFAM: Thiamine monophosphate synthase; SPTR: Thiamine-phosphate pyrophosphorylase; TIGRFAM: Thiamine monophosphate synthase; phosphomethylpyrimidine synthase 36753 10814320 Flexsi_0034 Flexistipes sinusarabici DSM 4947 phosphomethylpyrimidine synthase YP_004602300.1 35488 D 717231 CDS YP_004602301.1 336322334 10814321 36726..37370 1 NC_015672.1 PFAM: Thiamine monophosphate synthase/TENI; TIGRFAM: thiamine-phosphate pyrophosphorylase; COGs: COG0611 Thiamine monophosphate kinase; InterPro IPR006283:IPR000728:IPR010918; KEGG: dap:Dacet_2993 thiamine-monophosphate kinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; PRIAM: Thiamine-phosphate kinase; SPTR: Thiamine-monophosphate kinase; TIGRFAM: Thiamine-monophosphate kinase; thiamine-phosphate pyrophosphorylase 37370 10814321 Flexsi_0035 Flexistipes sinusarabici DSM 4947 thiamine-phosphate pyrophosphorylase YP_004602301.1 36726 D 717231 CDS YP_004602302.1 336322335 10814322 37367..38278 1 NC_015672.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: thiamine-monophosphate kinase; COGs: COG2220 Zn-dependent hydrolase of the beta-lactamase fold; KEGG: tye:THEYE_A1664 metal dependent hydrolase; SPTR: Metal dependent hydrolase; thiamine-monophosphate kinase 38278 10814322 Flexsi_0036 Flexistipes sinusarabici DSM 4947 thiamine-monophosphate kinase YP_004602302.1 37367 D 717231 CDS YP_004602303.1 336322336 10814323 complement(38279..38902) 1 NC_015672.1 metal dependent hydrolase 38902 10814323 Flexsi_0037 Flexistipes sinusarabici DSM 4947 metal dependent hydrolase YP_004602303.1 38279 R 717231 CDS YP_004602304.1 336322337 10814324 complement(38981..39151) 1 NC_015672.1 COGs: COG1739 conserved hypothetical protein; InterPro IPR001498; KEGG: ddf:DEFDS_0500 hypothetical protein; PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; SPTR: Putative uncharacterized protein; hypothetical protein 39151 10814324 Flexsi_0038 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602304.1 38981 R 717231 CDS YP_004602305.1 336322338 10814325 39446..40006 1 NC_015672.1 PFAM: Uncharacterized protein family UPF0029; TIGRFAM: uncharacterized protein, YigZ family; KEGG: cni:Calni_0020 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 40006 10814325 Flexsi_0039 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602305.1 39446 D 717231 CDS YP_004602306.1 336322339 10814326 complement(40079..40975) 1 NC_015672.1 KEGG: dap:Dacet_0979 glycoside hydrolase family 13 domain protein; hypothetical protein 40975 10814326 Flexsi_0040 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602306.1 40079 R 717231 CDS YP_004602307.1 336322340 10814327 complement(41033..41362) 1 NC_015672.1 InterPro IPR004193; KEGG: dap:Dacet_0980 hypothetical protein; PFAM: Glycoside hydrolase, family 13, N-terminal; SPTR: Conserved hypothetical 5-AMP-activated protein kinase, beta-1 subunit (AMPK beta-1 chain) (AMPKb); glycoside hydrolase family protein 41362 10814327 Flexsi_0041 Flexistipes sinusarabici DSM 4947 glycoside hydrolase family protein YP_004602307.1 41033 R 717231 CDS YP_004602308.1 336322341 10814328 complement(41359..41928) 1 NC_015672.1 PFAM: Carbohydrate-binding module 48 (Isoamylase N-terminal domain); COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR014284:IPR007627:IPR013249; KEGG: cni:Calni_0017 RNA polymerase, sigma-24 subunit, ecf subfamily; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma-70; glycoside hydrolase family protein 41928 10814328 Flexsi_0042 Flexistipes sinusarabici DSM 4947 glycoside hydrolase family protein YP_004602308.1 41359 R 717231 CDS YP_004602309.1 336322342 10814329 complement(41931..42392) 1 NC_015672.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; KEGG: gme:Gmet_3452 hypothetical protein; SPTR: Putative uncharacterized protein; ECF subfamily RNA polymerase sigma-24 subunit 42392 10814329 Flexsi_0043 Flexistipes sinusarabici DSM 4947 ECF subfamily RNA polymerase sigma-24 subunit YP_004602309.1 41931 R 717231 CDS YP_004602310.1 336322343 10814330 42707..43462 1 NC_015672.1 PFAM: Pollen proteins Ole e I like; InterPro IPR000620; KEGG: hel:HELO_1870 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 43462 10814330 Flexsi_0044 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602310.1 42707 D 717231 CDS YP_004602311.1 336322344 10814331 complement(43491..44369) 1 NC_015672.1 PFAM: EamA-like transporter family; KEGG: pfa:PF11_0207 conserved Plasmodium protein; hypothetical protein 44369 10814331 Flexsi_0045 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602311.1 43491 R 717231 CDS YP_004602312.1 336322345 10814332 44511..44822 1 NC_015672.1 manually curated; similar to conserved Plasmodium protein; hypothetical protein 44822 10814332 Flexsi_0046 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602312.1 44511 D 717231 CDS YP_004602313.1 336322346 10814334 46705..46917 1 NC_015672.1 PFAM: ATP synthase subunit C; KEGG: gur:Gura_0420 H+-transporting two-sector ATPase, E subunit; SPTR: V-type ATP synthase subunit E; H+transporting two-sector ATPase subunit C 46917 10814334 Flexsi_0048 Flexistipes sinusarabici DSM 4947 H+transporting two-sector ATPase subunit C YP_004602313.1 46705 D 717231 CDS YP_004602314.1 336322347 10814335 46924..47466 1 NC_015672.1 PFAM: ATP synthase (E/31 kDa) subunit; hypothetical protein 47466 10814335 Flexsi_0049 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602314.1 46924 D 717231 CDS YP_004602315.1 336322348 10814336 47441..48238 1 NC_015672.1 InterPro IPR008218; KEGG: vacuolar H+transporting two-sector ATPase subunit F; PFAM: ATPase, V1/A1 complex, subunit F; SPTR: Vacuolar H+transporting two-sector ATPase F subunit; hypothetical protein 48238 10814336 Flexsi_0050 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602315.1 47441 D 717231 CDS YP_004602316.1 336322349 10814337 48246..48572 1 NC_015672.1 PFAM: ATP synthase (F/14-kDa) subunit; COGs: COG1155 H+-ATPase subunit A; InterPro IPR004100:IPR000194; KEGG: sodium-transporting two-sector ATPase; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; PRIAM: Sodium-transporting two-sector ATPase; SPTR: H+transporting two-sector ATPase alpha/beta subunit central region; Vacuolar H+transporting two-sector ATPase F subunit 48572 10814337 Flexsi_0051 Flexistipes sinusarabici DSM 4947 Vacuolar H+transporting two-sector ATPase F subunit YP_004602316.1 48246 D 717231 CDS YP_004602317.1 336322350 10814338 48562..50121 1 NC_015672.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta chain, C terminal domain; ATP synthase alpha/beta family, nucleotide-binding domain; COGs: COG1156 H+-ATPase subunit B; InterPro IPR000194; KEGG: gur:Gura_0424 V-type ATP synthase subunit B; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; SPTR: V-type ATP synthase beta chain; sodium-transporting two-sector ATPase 50121 10814338 Flexsi_0052 Flexistipes sinusarabici DSM 4947 sodium-transporting two-sector ATPase YP_004602317.1 48562 D 717231 CDS YP_004602318.1 336322351 10814339 50118..51428 1 NC_015672.1 PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: V-type ATPase subunit D; PFAM: ATPase, V1/A1 complex, subunit D; SPTR: V-type ATPase, D subunit; TIGRFAM: ATPase, V1/A1 complex, subunit D; H+transporting two-sector ATPase alpha/beta subunit 51428 10814339 Flexsi_0053 Flexistipes sinusarabici DSM 4947 H+transporting two-sector ATPase alpha/beta subunit YP_004602318.1 50118 D 717231 CDS YP_004602319.1 336322352 10814340 51428..52051 1 NC_015672.1 PFAM: ATP synthase subunit D; TIGRFAM: H(+)-transporting ATP synthase, vacuolar type, subunit D; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dap:Dacet_2033 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase, group 1; V-type ATPase subunit D 52051 10814340 Flexsi_0054 Flexistipes sinusarabici DSM 4947 V-type ATPase subunit D YP_004602319.1 51428 D 717231 CDS YP_004602320.1 336322353 10814341 52552..53661 1 NC_015672.1 PFAM: Glycosyl transferases group 1; Domain of unknown function (DUF3524); COGs: COG1538 Outer membrane protein; InterPro IPR010131:IPR003423; KEGG: caa:Caka_1649 RND efflux system, outer membrane lipoprotein, NodT family; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein, NodT family; TIGRFAM: RND efflux system, outer membrane lipoprotein, NodT; group 1 glycosyl transferase 53661 10814341 Flexsi_0055 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602320.1 52552 D 717231 CDS YP_004602321.1 336322354 10814342 53984..55405 1 NC_015672.1 PFAM: Outer membrane efflux protein; TIGRFAM: efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: dat:HRM2_02380 putative membrane-fusion protein; PFAM: Secretion protein HlyD; SPTR: Putative membrane-fusion protein; TIGRFAM: Secretion protein HlyD; NodT family RND efflux system outer membrane lipoprotein 55405 10814342 Flexsi_0056 Flexistipes sinusarabici DSM 4947 NodT family RND efflux system outer membrane lipoprotein YP_004602321.1 53984 D 717231 CDS YP_004602322.1 336322355 10814343 55383..56588 1 NC_015672.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_1907 RND efflux system multidrug efflux transporter; PFAM: Acriflavin resistance protein; SPTR: RND efflux system, multidrug efflux transporter; RND family efflux transporter MFP subunit 56588 10814343 Flexsi_0057 Flexistipes sinusarabici DSM 4947 RND family efflux transporter MFP subunit YP_004602322.1 55383 D 717231 CDS YP_004602323.1 336322356 10814344 56585..59707 1 NC_015672.1 PFAM: AcrB/AcrD/AcrF family; KEGG: tjr:TherJR_2273 hypothetical protein; SPTR: Putative uncharacterized protein; acriflavin resistance protein 59707 10814344 Flexsi_0058 Flexistipes sinusarabici DSM 4947 acriflavin resistance protein YP_004602323.1 56585 D 717231 CDS YP_004602324.1 336322357 10814345 59727..60230 1 NC_015672.1 InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 60230 10814345 Flexsi_0059 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602324.1 59727 D 717231 CDS YP_004602325.1 336322358 10814346 complement(60459..61826) 1 NC_015672.1 PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 61826 10814346 Flexsi_0060 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602325.1 60459 R 717231 CDS YP_004602326.1 336322359 10814348 63873..64763 1 NC_015672.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; KEGG: dde:Dde_3307 hypothetical protein; SPTR: Putative uncharacterized protein; glycine betaine ABC transporter periplasmic subunit 64763 10814348 Flexsi_0062 Flexistipes sinusarabici DSM 4947 glycine betaine ABC transporter periplasmic subunit YP_004602326.1 63873 D 717231 CDS YP_004602327.1 336322360 10814349 64783..65457 1 NC_015672.1 PFAM: Trypsin; COGs: COG1391 Glutamine synthetase adenylyltransferase; InterPro IPR005190:IPR013546; KEGG: ddf:DEFDS_2134 glutamate-ammonia ligase adenylyltransferase; PFAM: Glutamate-ammonia ligase adenylyltransferase; PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; PRIAM: [Glutamate--ammonia-ligase] adenylyltransferase; SPTR: Glutamate-ammonia ligase adenylyltransferase; hypothetical protein 65457 10814349 Flexsi_0063 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602327.1 64783 D 717231 CDS YP_004602328.1 336322361 10814350 65705..68554 1 NC_015672.1 PFAM: GlnD PII-uridylyltransferase; Glutamate-ammonia ligase adenylyltransferase; COGs: COG0352 Thiamine monophosphate synthase; InterPro IPR003733; KEGG: cni:Calni_1866 thiamine monophosphate synthase; PFAM: Thiamine monophosphate synthase; SPTR: Putative uncharacterized protein; (glutamate--ammonia-ligase) adenylyltransferase 68554 10814350 Flexsi_0064 Flexistipes sinusarabici DSM 4947 (glutamate--ammonia-ligase) adenylyltransferase YP_004602328.1 65705 D 717231 CDS YP_004602329.1 336322362 10814351 68551..69108 1 NC_015672.1 PFAM: Thiamine monophosphate synthase/TENI; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: dap:Dacet_0096 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR, C-terminal; Transcriptional regulator IclR, N-terminal; SMART: Transcriptional regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; thiamine monophosphate synthase 69108 10814351 Flexsi_0065 Flexistipes sinusarabici DSM 4947 thiamine monophosphate synthase YP_004602329.1 68551 D 717231 CDS YP_004602330.1 336322363 10814352 complement(69099..69884) 1 NC_015672.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG0370 Fe2+ transport system protein B; InterProIPR005225:IPR003373:IPR002917:IPR011619:IPR 011642:IPR011640; KEGG: cni:Calni_1021 ferrous iron transport protein B; PFAM: GTP-binding protein, HSR1-related; Ferrous iron transport protein B, N-terminal; Nucleoside recognition; Ferrous iron transport protein B, C-terminal; SPTR: Ferrous iron transport protein B; TIGRFAM: Ferrous iron transport protein B; Small GTP-binding protein; IclR family transcriptional regulator 69884 10814352 Flexsi_0066 Flexistipes sinusarabici DSM 4947 IclR family transcriptional regulator YP_004602330.1 69099 R 717231 CDS YP_004602331.1 336322364 10814353 70350..72293 1 NC_015672.1 PFAM: Ferrous iron transport protein B; Ferrous iron transport protein B C terminus; Nucleoside recognition; TIGRFAM: ferrous iron transporter FeoB; small GTP-binding protein domain; InterPro IPR007167; KEGG: cni:Calni_1020 FeoA family protein; PFAM: Ferrous iron transporter, FeoA subunit; SPTR: FeoA family protein; ferrous iron transport protein B 72293 10814353 Flexsi_0067 Flexistipes sinusarabici DSM 4947 ferrous iron transport protein B YP_004602331.1 70350 D 717231 CDS YP_004602332.1 336322365 10814354 72302..72586 1 NC_015672.1 PFAM: FeoA domain; COGs: COG3086 Positive regulator of sigma E activity; InterPro IPR007359; KEGG: cni:Calni_1019 positive regulator of sigma e, rsec/mucc; PFAM: Positive regulator of sigma(E), RseC/MucC; SPTR: Positive regulator of sigma E, RseC/MucC; FeoA family protein 72586 10814354 Flexsi_0068 Flexistipes sinusarabici DSM 4947 FeoA family protein YP_004602332.1 72302 D 717231 CDS YP_004602333.1 336322366 10814355 72558..72998 1 NC_015672.1 PFAM: Positive regulator of sigma(E), RseC/MucC; COGs: COG0152 Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase; HAMAP: Phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro IPR001636; KEGG: ddf:DEFDS_1861 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase; PRIAM: Phosphoribosylaminoimidazolesuccinocarboxamide synthase; SPTR: Phosphoribosylaminoimidazole-succinocarboxamide synthase; TIGRFAM: SAICAR synthetase; sigma E positive regulator RseC/MucC 72998 10814355 Flexsi_0069 Flexistipes sinusarabici DSM 4947 sigma E positive regulator RseC/MucC YP_004602333.1 72558 D 717231 CDS YP_004602334.1 336322367 10814356 complement(73146..74024) 1 NC_015672.1 PFAM: SAICAR synthetase; TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR001763:IPR013027:IPR004099; KEGG: cni:Calni_0602 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: CoA-disulfide reductase; SMART: Rhodanese-like; SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; phosphoribosylaminoimidazole-succinocarboxamide synthase 74024 10814356 Flexsi_0070 Flexistipes sinusarabici DSM 4947 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_004602334.1 73146 R 717231 CDS YP_004602335.1 336322368 10814357 complement(74041..75696) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; Rhodanese-like domain; COGs: COG0621 2-methylthioadenine synthetase; InterProIPR005839:IPR006467:IPR006638:IPR013848:IPR 007197; KEGG: cni:Calni_0603 MiaB-like tRNA modifying enzyme; PFAM: Radical SAM; Methylthiotransferase, N-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: MiaB-like tRNA modifying enzyme; TIGRFAM: MiaB-like tRNA modifying enzyme; Methylthiotransferase; CoA-disulfide reductase 75696 10814357 Flexsi_0071 Flexistipes sinusarabici DSM 4947 CoA-disulfide reductase YP_004602335.1 74041 R 717231 CDS YP_004602336.1 336322369 10814358 complement(75686..76969) 1 NC_015672.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: MiaB-like tRNA modifying enzyme; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG2844 UTP:GlnB (protein PII) uridylyltransferase; HAMAP: Protein-PII uridylyltransferase; InterProIPR010043:IPR002934:IPR013546:IPR006674:IPR 002912; KEGG: ddf:DEFDS_1857 protein-P-II uridylyltransferase; PFAM: PII-uridylyltransferase/Glutamine-synthetase adenylyltransferase; Nucleotidyltransferase; Metal-dependent phosphohydrolase, HD region, subdomain; Amino acid-binding ACT; PRIAM: [Protein-PII] uridylyltransferase; SPTR: [Protein-PII] uridylyltransferase; TIGRFAM: Protein-PII uridylyltransferase; MiaB-like tRNA modifying protein 76969 10814358 Flexsi_0072 Flexistipes sinusarabici DSM 4947 MiaB-like tRNA modifying protein YP_004602336.1 75686 R 717231 CDS YP_004602337.1 336322370 10814359 77177..79768 1 NC_015672.1 PFAM: GlnD PII-uridylyltransferase; HD domain; ACT domain; Nucleotidyltransferase domain; TIGRFAM: [Protein-PII] uridylyltransferase; COGs: COG0341 Preprotein translocase subunit SecF; InterPro IPR005665:IPR003335; KEGG: ddf:DEFDS_0095 preprotein translocase subunit F; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit F; TIGRFAM: SecF protein; SecD/SecF/SecDF export membrane protein; UTP-GlnB uridylyltransferase, GlnD 79768 10814359 Flexsi_0073 Flexistipes sinusarabici DSM 4947 UTP-GlnB uridylyltransferase, GlnD YP_004602337.1 77177 D 717231 CDS YP_004602338.1 336322371 10814360 complement(79770..80687) 1 NC_015672.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein, SecD/SecF family; protein-export membrane protein SecF; COGs: COG0342 Preprotein translocase subunit SecD; InterPro IPR005791:IPR003335; KEGG: ddf:DEFDS_0094 preprotein translocase subunit D; PFAM: SecD/SecF/SecDF export membrane protein; SPTR: Preprotein translocase subunit D; TIGRFAM: SecD export membrane protein; SecD/SecF/SecDF export membrane protein; protein-export membrane protein SecF 80687 10814360 Flexsi_0074 Flexistipes sinusarabici DSM 4947 protein-export membrane protein SecF YP_004602338.1 79770 R 717231 CDS YP_004602339.1 336322372 10814361 complement(80699..82243) 1 NC_015672.1 PFAM: Protein export membrane protein; SecD/SecF GG Motif; TIGRFAM: protein-export membrane protein SecD; protein-export membrane protein, SecD/SecF family; COGs: COG1862 Preprotein translocase subunit YajC; InterPro IPR003849; KEGG: ddf:DEFDS_0093 preprotein translocase subunit YajC; PFAM: YajC; SPTR: Preprotein translocase subunit YajC; TIGRFAM: YajC; protein-export membrane protein SecD 82243 10814361 Flexsi_0075 Flexistipes sinusarabici DSM 4947 protein-export membrane protein SecD YP_004602339.1 80699 R 717231 CDS YP_004602340.1 336322373 10814362 complement(82246..82575) 1 NC_015672.1 PFAM: Preprotein translocase subunit; TIGRFAM: preprotein translocase, YajC subunit; COGs: COG0343 Queuine/archaeosine tRNA-ribosyltransferase; HAMAP: Queuine tRNA-ribosyltransferase; InterPro IPR004803:IPR002616; KEGG: ddf:DEFDS_0092 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase; PRIAM: tRNA-guanine transglycosylase; SPTR: Queuine tRNA-ribosyltransferase; TIGRFAM: Queuine tRNA-ribosyltransferase; Queuine/other tRNA-ribosyltransferase; preprotein translocase subunit YajC 82575 10814362 Flexsi_0076 Flexistipes sinusarabici DSM 4947 preprotein translocase subunit YajC YP_004602340.1 82246 R 717231 CDS YP_004602341.1 336322374 10814363 complement(82568..83689) 1 NC_015672.1 PFAM: Queuine tRNA-ribosyltransferase; TIGRFAM: tRNA-guanine transglycosylases, various specificities; tRNA-guanine transglycosylase, queuosine-34-forming; COGs: COG0809 S-adenosylmethionine:tRNA-ribosyltransferase-isomerase (queuine synthetase); HAMAP: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; InterPro IPR003699; KEGG: dap:Dacet_2454 S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein; SPTR: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: Queuosine biosynthesis protein; manually curated; queuine tRNA-ribosyltransferase 83689 10814363 Flexsi_0077 Flexistipes sinusarabici DSM 4947 queuine tRNA-ribosyltransferase YP_004602341.1 82568 R 717231 CDS YP_004602342.1 336322375 10814364 complement(83710..84726) 1 NC_015672.1 PFAM: Queuosine biosynthesis protein; TIGRFAM: S-adenosylmethionine:tRNA ribosyltransferase-isomerase; COGs: COG0498 Threonine synthase; InterPro IPR004450:IPR001926; KEGG: dap:Dacet_2455 threonine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Threonine synthase; SPTR: Threonine synthase; TIGRFAM: Threonine synthase; S-adenosylmethionine:tRNAribosyltransferase- isomerase 84726 10814364 Flexsi_0078 Flexistipes sinusarabici DSM 4947 S-adenosylmethionine:tRNAribosyltransferase- isomerase YP_004602342.1 83710 R 717231 CDS YP_004602343.1 336322376 10814365 complement(84710..86128) 1 NC_015672.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0105 Nucleoside diphosphate kinase; HAMAP: Nucleoside diphosphate kinase; InterPro IPR001564; KEGG: cni:Calni_1237 nucleoside diphosphate kinase; PFAM: Nucleoside diphosphate kinase, core; PRIAM: Nucleoside-diphosphate kinase; SMART: Nucleoside diphosphate kinase, core; SPTR: Nucleoside diphosphate kinase; threonine synthase 86128 10814365 Flexsi_0079 Flexistipes sinusarabici DSM 4947 threonine synthase YP_004602343.1 84710 R 717231 CDS YP_004602344.1 336322377 10814366 complement(86146..86559) 1 NC_015672.1 PFAM: Nucleoside diphosphate kinase; InterPro IPR013096; KEGG: ddf:DEFDS_2012 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; nucleoside diphosphate kinase 86559 10814366 Flexsi_0080 Flexistipes sinusarabici DSM 4947 nucleoside diphosphate kinase YP_004602344.1 86146 R 717231 CDS YP_004602345.1 336322378 10814367 complement(86600..86944) 1 NC_015672.1 PFAM: Cupin domain; InterPro IPR006153; KEGG: dap:Dacet_2458 sodium/hydrogen exchanger; PFAM: Cation/H+ exchanger; SPTR: Sodium/hydrogen exchanger; cupin 86944 10814367 Flexsi_0081 Flexistipes sinusarabici DSM 4947 cupin YP_004602345.1 86600 R 717231 CDS YP_004602346.1 336322379 10814368 complement(86955..88190) 1 NC_015672.1 PFAM: Sodium/hydrogen exchanger family; KEGG: dap:Dacet_2459 hypothetical protein; SPTR: Putative uncharacterized protein; sodium/hydrogen exchanger 88190 10814368 Flexsi_0082 Flexistipes sinusarabici DSM 4947 sodium/hydrogen exchanger YP_004602346.1 86955 R 717231 CDS YP_004602347.1 336322380 10814369 complement(88171..89289) 1 NC_015672.1 KEGG: cni:Calni_0747 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 89289 10814369 Flexsi_0083 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602347.1 88171 R 717231 CDS YP_004602348.1 336322381 10814370 89361..89540 1 NC_015672.1 COGs: COG0245 2C-methyl-D-erythritol 2 4-cyclodiphosphate synthase; HAMAP: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; InterPro IPR003526; KEGG: cni:Calni_0748 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; SPTR: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core; hypothetical protein 89540 10814370 Flexsi_0084 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602348.1 89361 D 717231 CDS YP_004602349.1 336322382 10814371 89518..90009 1 NC_015672.1 PFAM: YgbB family; TIGRFAM: 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; COGs: COG0751 Glycyl-tRNA synthetase beta subunit; HAMAP: Glycyl-tRNA synthetase beta subunit; InterPro IPR015944:IPR002311:IPR008909; KEGG: ddf:DEFDS_0236 glycyl-tRNA synthetase subunit beta; PFAM: Glycyl-tRNA synthetase, class IIc, beta subunit, N-terminal; DALR anticodon binding; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase beta subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, beta subunit; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 90009 10814371 Flexsi_0085 Flexistipes sinusarabici DSM 4947 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_004602349.1 89518 D 717231 CDS YP_004602350.1 336322383 10814372 90109..92175 1 NC_015672.1 PFAM: Glycyl-tRNA synthetase beta subunit; DALR anticodon binding domain; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, beta subunit; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR010121:IPR002192:IPR008279:IPR000121; KEGG: ddf:DEFDS_0235 pyruvate phosphate dikinase; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; PEP-utilising enzyme, mobile region; PEP-utilising enzyme; PRIAM: Pyruvate, phosphate dikinase; SPTR: Pyruvate phosphate dikinase; TIGRFAM: Pyruvate, phosphate dikinase; glycyl-tRNA synthetase subunit beta 92175 10814372 Flexsi_0086 Flexistipes sinusarabici DSM 4947 glycyl-tRNA synthetase subunit beta YP_004602350.1 90109 D 717231 CDS YP_004602351.1 336322384 10814373 92197..94818 1 NC_015672.1 PFAM: PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, mobile domain; Pyruvate phosphate dikinase, PEP/pyruvate binding domain; TIGRFAM: pyruvate, phosphate dikinase; KEGG: ddf:DEFDS_0088 hypothetical protein; SPTR: Putative uncharacterized protein; pyruvate, phosphate dikinase 94818 10814373 Flexsi_0087 Flexistipes sinusarabici DSM 4947 pyruvate, phosphate dikinase YP_004602351.1 92197 D 717231 CDS YP_004602352.1 336322385 10814374 94874..95476 1 NC_015672.1 KEGG: cni:Calni_2056 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 95476 10814374 Flexsi_0088 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602352.1 94874 D 717231 CDS YP_004602353.1 336322386 10814375 95502..96011 1 NC_015672.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dap:Dacet_2810 histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Histidine kinase; hypothetical protein 96011 10814375 Flexsi_0089 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602353.1 95502 D 717231 CDS YP_004602354.1 336322387 10814376 96052..97485 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0085 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; histidine kinase 97485 10814376 Flexsi_0090 Flexistipes sinusarabici DSM 4947 histidine kinase YP_004602354.1 96052 D 717231 CDS YP_004602355.1 336322388 10814377 97495..97857 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: ddf:DEFDS_0260 protein-L-isoaspartate (D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; response regulator receiver protein 97857 10814377 Flexsi_0091 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004602355.1 97495 D 717231 CDS YP_004602356.1 336322389 10814378 complement(97868..98476) 1 NC_015672.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG0548 Acetylglutamate kinase; InterPro IPR004662:IPR001048; KEGG: cni:Calni_0262 N-acetylglutamate kinase; PFAM: Aspartate/glutamate/uridylate kinase; PRIAM: Acetylglutamate kinase; SPTR: Acetylglutamate kinase; TIGRFAM: Acetylglutamate kinase; protein-L-isoaspartate(D-aspartate) O-methyltransferase 98476 10814378 Flexsi_0092 Flexistipes sinusarabici DSM 4947 protein-L-isoaspartate(D-aspartate) O-methyltransferase YP_004602356.1 97868 R 717231 CDS YP_004602357.1 336322390 10814379 complement(98473..99351) 1 NC_015672.1 PFAM: Amino acid kinase family; TIGRFAM: acetylglutamate kinase; KEGG: cni:Calni_1417 hypothetical protein; SPTR: Putative uncharacterized protein; acetylglutamate kinase 99351 10814379 Flexsi_0093 Flexistipes sinusarabici DSM 4947 acetylglutamate kinase YP_004602357.1 98473 R 717231 CDS YP_004602358.1 336322391 10814380 99660..101444 1 NC_015672.1 hypothetical protein 101444 10814380 Flexsi_0094 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602358.1 99660 D 717231 CDS YP_004602359.1 336322392 10814381 complement(101500..101652) 1 NC_015672.1 COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cni:Calni_0924 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; hypothetical protein 101652 10814381 Flexsi_0095 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602359.1 101500 R 717231 CDS YP_004602360.1 336322393 10814382 complement(101878..102345) 1 NC_015672.1 PFAM: Universal stress protein family; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cni:Calni_0924 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; UspA domain-containing protein 102345 10814382 Flexsi_0096 Flexistipes sinusarabici DSM 4947 UspA domain-containing protein YP_004602360.1 101878 R 717231 CDS YP_004602361.1 336322394 10814383 complement(102383..102850) 1 NC_015672.1 PFAM: Universal stress protein family; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_0923 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; UspA domain-containing protein 102850 10814383 Flexsi_0097 Flexistipes sinusarabici DSM 4947 UspA domain-containing protein YP_004602361.1 102383 R 717231 CDS YP_004602362.1 336322395 10814384 complement(102879..103235) 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG0084 Mg-dependent DNase; InterPro IPR015991:IPR001130; KEGG: ddf:DEFDS_0065 deoxyribonuclease TatD family; PFAM: Deoxyribonuclease, TatD-related; SPTR: Deoxyribonuclease, TatD family; TIGRFAM: Deoxyribonuclease, TatD Mg-dependent, prokaryote; response regulator receiver protein 103235 10814384 Flexsi_0098 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004602362.1 102879 R 717231 CDS YP_004602363.1 336322396 10814385 complement(103239..104084) 1 NC_015672.1 PFAM: TatD related DNase; TIGRFAM: hydrolase, TatD family; COGs: COG0143 Methionyl-tRNA synthetase; HAMAP: Methionyl-tRNA synthetase; InterPro IPR002304:IPR004495:IPR015413:IPR002547; KEGG: cni:Calni_0921 methionyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); tRNA-binding region; PRIAM: Methionine--tRNA ligase; SPTR: Methionyl-tRNA synthetase; TIGRFAM: Methionyl-tRNA synthetase, class Ia; Methionyl-tRNA synthetase, class Ia, beta subunit, C-terminal; TatD family hydrolase 104084 10814385 Flexsi_0099 Flexistipes sinusarabici DSM 4947 TatD family hydrolase YP_004602363.1 103239 R 717231 CDS YP_004602364.1 336322397 10814386 complement(104093..106015) 1 NC_015672.1 PFAM: Anticodon-binding domain; tRNA synthetases class I (M); Putative tRNA binding domain; TIGRFAM: methionyl-tRNA synthetase C-terminal region/beta chain; methionyl-tRNA synthetase; COGs: COG1774 Uncharacterized homolog of PSP1; InterPro IPR007557; KEGG: cni:Calni_0920 PSP1 domain protein; PFAM: PSP1, C-terminal; SPTR: PSP1 domain protein; methionyl-tRNA synthetase 106015 10814386 Flexsi_0100 Flexistipes sinusarabici DSM 4947 methionyl-tRNA synthetase YP_004602364.1 104093 R 717231 CDS YP_004602365.1 336322398 10814387 complement(106012..106728) 1 NC_015672.1 PFAM: PSP1 C-terminal conserved region; COGs: COG2812 DNA polymerase III gamma/tau subunits; KEGG: dap:Dacet_2365 DNA-directed DNA polymerase; SPTR: DNA-directed DNA polymerase; PSP1 domain-containing protein 106728 10814387 Flexsi_0101 Flexistipes sinusarabici DSM 4947 PSP1 domain-containing protein YP_004602365.1 106012 R 717231 CDS YP_004602366.1 336322399 10814388 complement(106715..107587) 1 NC_015672.1 TIGRFAM: DNA polymerase III, delta' subunit; COGs: COG0125 Thymidylate kinase; HAMAP: Thymidylate kinase; InterPro IPR018094:IPR000062; KEGG: ddf:DEFDS_0069 dTMP kinase; PFAM: Thymidylate kinase-like; PRIAM: dTMP kinase; SPTR: Thymidylate kinase; TIGRFAM: Thymidylate kinase; DNA-directed DNA polymerase 107587 10814388 Flexsi_0102 Flexistipes sinusarabici DSM 4947 DNA-directed DNA polymerase YP_004602366.1 106715 R 717231 CDS YP_004602367.1 336322400 10814389 complement(107610..108275) 1 NC_015672.1 PFAM: Thymidylate kinase; TIGRFAM: thymidylate kinase; COGs: COG0521 Molybdopterin biosynthesis protein; InterPro IPR020817:IPR005302:IPR001453; KEGG: ddf:DEFDS_0070 hypothetical protein; PFAM: Molybdopterin binding; Molybdenum cofactor sulfurase, C-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Molybdenum cofactor synthesis; thymidylate kinase 108275 10814389 Flexsi_0103 Flexistipes sinusarabici DSM 4947 thymidylate kinase YP_004602367.1 107610 R 717231 CDS YP_004602368.1 336322401 10814390 complement(108262..109191) 1 NC_015672.1 PFAM: Probable molybdopterin binding domain; MOSC domain; TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0299 Folate-dependent phosphoribosylglycinamide formyltransferase PurN; InterPro IPR004607:IPR002376; KEGG: ddf:DEFDS_0168 phosphoribosylglycinamide formyltransferase; PFAM: Formyl transferase, N-terminal; PRIAM: Phosphoribosylglycinamide formyltransferase; SPTR: Phosphoribosylglycinamide formyltransferase; TIGRFAM: Phosphoribosylglycinamide formyltransferase; molybdenum cofactor synthesis domain-containing protein 109191 10814390 Flexsi_0104 Flexistipes sinusarabici DSM 4947 molybdenum cofactor synthesis domain-containing protein YP_004602368.1 108262 R 717231 CDS YP_004602369.1 336322402 10814391 complement(109274..109885) 1 NC_015672.1 PFAM: Formyl transferase; TIGRFAM: phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent; COGs: COG0150 Phosphoribosylaminoimidazole (AIR) synthetase; InterPro IPR004733:IPR000728:IPR010918; KEGG: ddf:DEFDS_0167 phosphoribosylformylglycinamidine cyclo-ligase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; PRIAM: Phosphoribosylformylglycinamidine cyclo-ligase; SPTR: Phosphoribosylformylglycinamidine cyclo-ligase; TIGRFAM: Phosphoribosylformylglycinamidine cyclo-ligase; phosphoribosylglycinamide formyltransferase 109885 10814391 Flexsi_0105 Flexistipes sinusarabici DSM 4947 phosphoribosylglycinamide formyltransferase YP_004602369.1 109274 R 717231 CDS YP_004602370.1 336322403 10814392 complement(109882..110916) 1 NC_015672.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylaminoimidazole synthetase; InterPro IPR001789; KEGG: ddf:DEFDS_0166 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; phosphoribosylformylglycinamidine cyclo-ligase 110916 10814392 Flexsi_0106 Flexistipes sinusarabici DSM 4947 phosphoribosylformylglycinamidine cyclo-ligase YP_004602370.1 109882 R 717231 CDS YP_004602371.1 336322404 10814393 complement(110918..112276) 1 NC_015672.1 PFAM: Response regulator receiver domain; KEGG: cni:Calni_0657 hypothetical protein; SPTR: Putative uncharacterized protein; response regulator receiver 112276 10814393 Flexsi_0107 Flexistipes sinusarabici DSM 4947 response regulator receiver YP_004602371.1 110918 R 717231 CDS YP_004602372.1 336322405 10814394 complement(112251..112631) 1 NC_015672.1 PFAM: CheW-like domain; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterProIPR008207:IPR003594:IPR002545:IPR001789:IPR 004105; KEGG: ddf:DEFDS_0164 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; Signal transduction histidine kinase, subgroup, homodimeric; CheW-like protein; SMART: Signal transduction response regulator, receiver region; ATP-binding region, ATPase-like; Signal transduction histidine kinase, phosphotransfer (Hpt) region; CheW-like protein; SPTR: Putative uncharacterized protein; hypothetical protein 112631 10814394 Flexsi_0108 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602372.1 112251 R 717231 CDS YP_004602373.1 336322406 10814395 complement(112612..115008) 1 NC_015672.1 PFAM: CheW-like domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; Signal transducing histidine kinase, homodimeric domain; Hpt domain; COGs: COG0840 Methyl-accepting chemotaxis protein; InterPro IPR003660:IPR004089; KEGG: cni:Calni_0655 methyl-accepting chemotaxis sensory transducer; PFAM: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SMART: Chemotaxis methyl-accepting receptor, signalling; HAMP linker domain; SPTR: Methyl-accepting chemotaxis sensory transducer; CheA signal transduction histidine kinase 115008 10814395 Flexsi_0109 Flexistipes sinusarabici DSM 4947 CheA signal transduction histidine kinase YP_004602373.1 112612 R 717231 CDS YP_004602374.1 336322407 10814396 complement(115011..117182) 1 NC_015672.1 PFAM: HAMP domain; Methyl-accepting chemotaxis protein (MCP) signaling domain; COGs: COG0835 Chemotaxis signal transduction protein; InterPro IPR002545; KEGG: psm:PSM_A2230 purine-binding chemotaxis protein; PFAM: CheW-like protein; SMART: CheW-like protein; SPTR: Purine-binding chemotaxis protein; methyl-accepting chemotaxis sensory transducer 117182 10814396 Flexsi_0110 Flexistipes sinusarabici DSM 4947 methyl-accepting chemotaxis sensory transducer YP_004602374.1 115011 R 717231 CDS YP_004602375.1 336322408 10814397 complement(117196..117672) 1 NC_015672.1 PFAM: CheW-like domain; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789; KEGG: ddf:DEFDS_0161 twitching motility two-component system response regulator PilH; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Twitching motility two-component system response regulator PilH; CheW protein 117672 10814397 Flexsi_0111 Flexistipes sinusarabici DSM 4947 CheW protein YP_004602375.1 117196 R 717231 CDS YP_004602376.1 336322409 10814398 complement(117666..118031) 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_0652 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; response regulator receiver protein 118031 10814398 Flexsi_0112 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004602376.1 117666 R 717231 CDS YP_004602377.1 336322410 10814399 complement(118044..119294) 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG0669 Phosphopantetheine adenylyltransferase; HAMAP: Coenzyme A biosynthesis protein; InterPro IPR004821:IPR001980:IPR004820; KEGG: cni:Calni_0650 phosphopantetheine adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Pantetheine-phosphate adenylyltransferase; SPTR: Phosphopantetheine adenylyltransferase; TIGRFAM: Coenzyme A biosynthesis protein; Cytidyltransferase-related; response regulator receiver protein 119294 10814399 Flexsi_0113 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004602377.1 118044 R 717231 CDS YP_004602378.1 336322411 10814400 complement(119390..119863) 1 NC_015672.1 PFAM: Cytidylyltransferase; TIGRFAM: pantetheine-phosphate adenylyltransferase, bacterial; cytidyltransferase-related domain; COGs: COG0742 N6-adenine-specific methylase; InterPro IPR004398:IPR016065; KEGG: ddf:DEFDS_0157 DNA methylase; PFAM: Protein of unknown function methylase putative; SPTR: DNA methylase; TIGRFAM: Conserved hypothetical protein CHP00095; manually curated; phosphopantetheine adenylyltransferase 119863 10814400 Flexsi_0114 Flexistipes sinusarabici DSM 4947 phosphopantetheine adenylyltransferase YP_004602378.1 119390 R 717231 CDS YP_004602379.1 336322412 10814401 complement(119860..120396) 1 NC_015672.1 PFAM: Conserved hypothetical protein 95; TIGRFAM: RNA methyltransferase, RsmD family; COGs: COG1243 Histone acetyltransferase; InterPro IPR006638:IPR007197; KEGG: dap:Dacet_3015 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; methyltransferase 120396 10814401 Flexsi_0115 Flexistipes sinusarabici DSM 4947 methyltransferase YP_004602379.1 119860 R 717231 CDS YP_004602380.1 336322413 10814402 complement(120317..121336) 1 NC_015672.1 PFAM: Radical SAM superfamily; COGs: COG0571 dsRNA-specific ribonuclease; HAMAP: Ribonuclease III, bacterial; InterPro IPR011907:IPR000999:IPR001159; KEGG: cni:Calni_1228 RNase III; PFAM: Ribonuclease III; Double-stranded RNA binding; PRIAM: Ribonuclease III; SMART: Ribonuclease III; Double-stranded RNA binding; SPTR: Ribonuclease 3; TIGRFAM: Ribonuclease III, bacterial; radical SAM protein 121336 10814402 Flexsi_0116 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004602380.1 120317 R 717231 CDS YP_004602381.1 336322414 10814403 complement(121329..122009) 1 NC_015672.1 PFAM: Double-stranded RNA binding motif; RNase3 domain; TIGRFAM: ribonuclease III, bacterial; COGs: COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; InterPro IPR017568:IPR014030:IPR014031; KEGG: ddf:DEFDS_0154 3-oxoacyl-[acyl-carrier-protein] synthase II; PFAM: Beta-ketoacyl synthase, N-terminal; Beta-ketoacyl synthase, C-terminal; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase II; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; ribonuclease 3 122009 10814403 Flexsi_0117 Flexistipes sinusarabici DSM 4947 ribonuclease 3 YP_004602381.1 121329 R 717231 CDS YP_004602382.1 336322415 10814404 complement(122018..123253) 1 NC_015672.1 PFAM: Beta-ketoacyl synthase, N-terminal domain; Beta-ketoacyl synthase, C-terminal domain; TIGRFAM: beta-ketoacyl-acyl-carrier-protein synthase II; HAMAP: Acyl carrier protein (ACP); InterPro IPR003231:IPR006163; KEGG: ddf:DEFDS_0153 acyl carrier protein ACP; PFAM: Phosphopantetheine-binding; SPTR: Acyl carrier protein; TIGRFAM: Acyl carrier protein (ACP); 3-oxoacyl-(acyl-carrier-protein) synthase 2 123253 10814404 Flexsi_0118 Flexistipes sinusarabici DSM 4947 3-oxoacyl-(acyl-carrier-protein) synthase 2 YP_004602382.1 122018 R 717231 CDS YP_004602383.1 336322416 10814405 complement(123306..123542) 1 NC_015672.1 PFAM: Phosphopantetheine attachment site; TIGRFAM: acyl carrier protein; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011284:IPR002198; KEGG: cni:Calni_1225 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: Short-chain dehydrogenase/reductase SDR; SPTR: 3-oxoacyl-(Acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; acyl carrier protein 123542 10814405 Flexsi_0119 Flexistipes sinusarabici DSM 4947 acyl carrier protein YP_004602383.1 123306 R 717231 CDS YP_004602384.1 336322417 10814406 complement(123579..124322) 1 NC_015672.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; COGs: COG0331 (acyl-carrier-protein) S-malonyltransferase; InterPro IPR004410:IPR014043; KEGG: cni:Calni_1224 (acyl-carrier-protein) S-malonyltransferase; PFAM: Acyl transferase; SPTR: (Acyl-carrier-protein) S-malonyltransferase; TIGRFAM: Malonyl CoA-acyl carrier protein transacylase; 3-oxoacyl-(acyl-carrier-protein) reductase 124322 10814406 Flexsi_0120 Flexistipes sinusarabici DSM 4947 3-oxoacyl-(acyl-carrier-protein) reductase YP_004602384.1 123579 R 717231 CDS YP_004602385.1 336322418 10814407 complement(124315..125250) 1 NC_015672.1 PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; COGs: COG0332 3-oxoacyl-(acyl-carrier-protein); HAMAP: Beta-ketoacyl-acyl carrier protein synthase III (FabH); InterPro IPR004655:IPR013751:IPR013747; KEGG: cni:Calni_1223 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C-terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Beta-ketoacyl-acyl-carrier-protein synthase I; SPTR: 3-oxoacyl-[acyl-carrier-protein] synthase 3; TIGRFAM: Beta-ketoacyl-acyl carrier protein synthase III (FabH); malonyl CoA-acyl carrier protein transacylase 125250 10814407 Flexsi_0121 Flexistipes sinusarabici DSM 4947 malonyl CoA-acyl carrier protein transacylase YP_004602385.1 124315 R 717231 CDS YP_004602386.1 336322419 10814408 complement(125271..126248) 1 NC_015672.1 PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; COGs: COG0416 Fatty acid/phospholipid biosynthesis enzyme; HAMAP: Phospholipid biosynthesis protein, PlsX like; InterPro IPR012281:IPR003664; KEGG: ddf:DEFDS_0149 fatty acid/phospholipid synthesis protein PlsX; PFAM: Fatty acid synthesis plsX protein; SPTR: Phosphate acyltransferase; TIGRFAM: Phospholipid biosynthesis protein, PlsX like; 3-oxoacyl-ACP synthase 126248 10814408 Flexsi_0122 Flexistipes sinusarabici DSM 4947 3-oxoacyl-ACP synthase YP_004602386.1 125271 R 717231 CDS YP_004602387.1 336322420 10814409 complement(126289..127365) 1 NC_015672.1 PFAM: Fatty acid synthesis protein; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; COGs: COG0333 Ribosomal protein L32; HAMAP: Ribosomal protein L32p; InterPro IPR002677; KEGG: ddf:DEFDS_0148 50S ribosomal protein L32; PFAM: Ribosomal protein L32p; SPTR: 50S ribosomal protein L32; TIGRFAM: Ribosomal protein L32p; phosphate acyltransferase 127365 10814409 Flexsi_0123 Flexistipes sinusarabici DSM 4947 phosphate acyltransferase YP_004602387.1 126289 R 717231 CDS YP_004602388.1 336322421 10814410 complement(127372..127554) 1 NC_015672.1 PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; COGs: COG1399 metal-binding possibly nucleic acid-binding protein; InterPro IPR003772; KEGG: cni:Calni_1220 hypothetical protein; PFAM: Protein of unknown function DUF177; SPTR: Putative uncharacterized protein; 50S ribosomal protein L32 127554 10814410 Flexsi_0124 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L32 YP_004602388.1 127372 R 717231 CDS YP_004602389.1 336322422 10814411 complement(127557..128075) 1 NC_015672.1 PFAM: Uncharacterized ACR, COG1399; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_0619 aspartate transaminase; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aspartate transaminase; hypothetical protein 128075 10814411 Flexsi_0125 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602389.1 127557 R 717231 CDS YP_004602390.1 336322423 10814412 complement(128291..129595) 1 NC_015672.1 PFAM: Aminotransferase class I and II; COGs: COG4276 conserved hypothetical protein; KEGG: dap:Dacet_2029 hypothetical protein; SPTR: Putative uncharacterized protein; aspartate transaminase 129595 10814412 Flexsi_0126 Flexistipes sinusarabici DSM 4947 aspartate transaminase YP_004602390.1 128291 R 717231 CDS YP_004602391.1 336322424 10814413 129801..130253 1 NC_015672.1 COGs: COG1207 N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains); HAMAP: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; InterPro IPR005882:IPR005835:IPR001451; KEGG: dap:Dacet_2836 UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; Bacterial transferase hexapeptide repeat; PRIAM: Glucosamine-1-phosphate N-acetyltransferase; SPTR: Bifunctional protein glmU; TIGRFAM: Bifunctional UDP-N-acetylglucosamine pyrophosphorylase/glucosamine-1-phosphate N-acetyltransferase; hypothetical protein 130253 10814413 Flexsi_0127 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602391.1 129801 D 717231 CDS YP_004602392.1 336322425 10814414 130281..131687 1 NC_015672.1 PFAM: Nucleotidyl transferase; TIGRFAM: UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase; COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; HAMAP: Glucosamine--fructose-6-phosphate aminotransferase [isomerizing]; InterPro IPR005855:IPR000583:IPR001347; KEGG: cni:Calni_0410 glutamine--fructose-6-phosphate transaminase; PFAM: Glutamine amidotransferase, class-II; Sugar isomerase (SIS); PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glutamine--fructose-6-phosphate transaminase; TIGRFAM: Glucosamine-fructose-6-phosphate aminotransferase, isomerising; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 131687 10814414 Flexsi_0128 Flexistipes sinusarabici DSM 4947 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_004602392.1 130281 D 717231 CDS YP_004602393.1 336322426 10814415 131690..133519 1 NC_015672.1 PFAM: SIS domain; Glutamine amidotransferases class-II; TIGRFAM: glucosamine--fructose-6-phosphate aminotransferase (isomerizing); COGs: COG0038 Chloride channel protein EriC; InterPro IPR000644:IPR001807; KEGG: ddf:DEFDS_1948 chloride channel protein, CIC family; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Chloride channel protein, CIC family; glucosamine--fructose-6-phosphate aminotransferase 133519 10814415 Flexsi_0129 Flexistipes sinusarabici DSM 4947 glucosamine--fructose-6-phosphate aminotransferase YP_004602393.1 131690 D 717231 CDS YP_004602394.1 336322427 10814416 133522..135264 1 NC_015672.1 PFAM: CBS domain; Voltage gated chloride channel; COGs: COG0210 Superfamily I DNA and RNA helicase; InterPro IPR000212; KEGG: dap:Dacet_2392 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; Cl- channel voltage-gated family protein 135264 10814416 Flexsi_0130 Flexistipes sinusarabici DSM 4947 Cl- channel voltage-gated family protein YP_004602394.1 133522 D 717231 CDS YP_004602395.1 336322428 10814417 135400..137457 1 NC_015672.1 PFAM: UvrD/REP helicase; COGs: COG0721 Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit; HAMAP: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; InterPro IPR003837; KEGG: ddf:DEFDS_1950 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C; PFAM: Glu-tRNAGln amidotransferase, C subunit; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; TIGRFAM: Glu-tRNAGln amidotransferase, C subunit; UvrD/REP helicase 137457 10814417 Flexsi_0131 Flexistipes sinusarabici DSM 4947 UvrD/REP helicase YP_004602395.1 135400 D 717231 CDS YP_004602396.1 336322429 10814418 137533..137829 1 NC_015672.1 PFAM: Glu-tRNAGln amidotransferase C subunit; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, C subunit; COGs: COG0154 Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidase; HAMAP: Glutamyl-tRNA(Gln) amidotransferase A subunit; InterPro IPR004412:IPR000120; KEGG: ddf:DEFDS_1951 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A; PFAM: Amidase; PRIAM: Amidase; SPTR: Glutamyl-tRNA(Gln) amidotransferase subunit A; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase A subunit; aspartyl/glutamyl-tRNA amidotransferase subunit C 137829 10814418 Flexsi_0132 Flexistipes sinusarabici DSM 4947 aspartyl/glutamyl-tRNA amidotransferase subunit C YP_004602396.1 137533 D 717231 CDS YP_004602397.1 336322430 10814419 137851..139311 1 NC_015672.1 PFAM: Amidase; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, A subunit; InterPro IPR009288; KEGG: cni:Calni_1048 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; glutamyl-tRNA(Gln) amidotransferase subunit A 139311 10814419 Flexsi_0133 Flexistipes sinusarabici DSM 4947 glutamyl-tRNA(Gln) amidotransferase subunit A YP_004602397.1 137851 D 717231 CDS YP_004602398.1 336322431 10814420 139341..139748 1 NC_015672.1 PFAM: AIG2-like family; COGs: COG0064 Asp-tRNAAsn/Glu-tRNAGln amidotransferase B subunit (PET112 homolog); HAMAP: Glutamyl-tRNA(Gln) amidotransferase, B subunit; InterPro IPR004413:IPR006075:IPR006107:IPR018027; KEGG: ddf:DEFDS_1934 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B; PFAM: Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, N-terminal; Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, central region; Asn/Gln amidotransferase; SPTR: Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B; TIGRFAM: Glutamyl-tRNA(Gln) amidotransferase, B subunit; AIG2 family protein 139748 10814420 Flexsi_0134 Flexistipes sinusarabici DSM 4947 AIG2 family protein YP_004602398.1 139341 D 717231 CDS YP_004602399.1 336322432 10814421 139760..141196 1 NC_015672.1 PFAM: GatB/GatE catalytic domain; GatB domain; TIGRFAM: aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit; InterPro IPR017515:IPR004360; KEGG: dap:Dacet_2428 methylmalonyl-CoA epimerase; PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; SPTR: Methylmalonyl-CoA epimerase; TIGRFAM: Methylmalonyl-CoA epimerase; aspartyl/glutamyl-tRNA amidotransferase subunit B 141196 10814421 Flexsi_0135 Flexistipes sinusarabici DSM 4947 aspartyl/glutamyl-tRNA amidotransferase subunit B YP_004602399.1 139760 D 717231 CDS YP_004602400.1 336322433 10814422 141206..141607 1 NC_015672.1 PFAM: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily; TIGRFAM: methylmalonyl-CoA epimerase; COGs: COG2897 Rhodanese-related sulfurtransferase; InterPro IPR001763; KEGG: ddf:DEFDS_1937 rhodanese domain protein; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: Rhodanese domain protein; methylmalonyl-CoA epimerase 141607 10814422 Flexsi_0136 Flexistipes sinusarabici DSM 4947 methylmalonyl-CoA epimerase YP_004602400.1 141206 D 717231 CDS YP_004602401.1 336322434 10814423 complement(141993..143201) 1 NC_015672.1 PFAM: Rhodanese-like domain; COGs: COG3221 ABC-type phosphate/phosphonate transport system periplasmic component; KEGG: ddf:DEFDS_1456 phosphate/phosphonate ABC transporter substrate-binding protein; SPTR: Phosphate/phosphonate ABC transporter, substrate-binding protein; rhodanese-like protein 143201 10814423 Flexsi_0137 Flexistipes sinusarabici DSM 4947 rhodanese-like protein YP_004602401.1 141993 R 717231 CDS YP_004602402.1 336322435 10814424 143954..144514 1 NC_015672.1 PFAM: NMT1/THI5 like; TIGRFAM: phosphate/phosphite/phosphonate ABC transporters, periplasmic binding protein; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; phosphate/phosphonate ABC transporter substrate-binding protein 144514 10814424 Flexsi_0138 Flexistipes sinusarabici DSM 4947 phosphate/phosphonate ABC transporter substrate-binding protein YP_004602402.1 143954 D 717231 CDS YP_004602403.1 336322436 10814425 complement(144702..146021) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 146021 10814425 Flexsi_0139 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602403.1 144702 R 717231 CDS YP_004602404.1 336322437 10814427 146279..146485 1 NC_015672.1 manually curated; hypothetical protein 146485 10814427 Flexsi_0141 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602404.1 146279 D 717231 CDS YP_004602405.1 336322438 10814429 complement(147822..148739) 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: aeh:Mlg_0129 transposase, IS4 family protein; SPTR: Transposase, IS4 family; hypothetical protein 148739 10814429 Flexsi_0143 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602405.1 147822 R 717231 CDS YP_004602406.1 336322439 10814430 complement(148743..149498) 1 NC_015672.1 KEGG: drt:Dret_0154 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; transposase, IS4 family protein 149498 10814430 Flexsi_0144 Flexistipes sinusarabici DSM 4947 transposase, IS4 family protein YP_004602406.1 148743 R 717231 CDS YP_004602407.1 336322440 10814431 complement(149847..150038) 1 NC_015672.1 PFAM: Protein of unknown function (DUF1271); COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: nth:Nther_1561 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase; 4Fe-4S ferredoxin 150038 10814431 Flexsi_0145 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004602407.1 149847 R 717231 CDS YP_004602408.1 336322441 10814432 150472..151107 1 NC_015672.1 PFAM: NADPH-dependent FMN reductase; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; NADPH-dependent FMN reductase 151107 10814432 Flexsi_0146 Flexistipes sinusarabici DSM 4947 NADPH-dependent FMN reductase YP_004602408.1 150472 D 717231 CDS YP_004602409.1 336322442 10814433 complement(151382..152431) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_1448 RND efflux system multidrug efflux transporter; PFAM: Acriflavin resistance protein; SPTR: RND efflux system, multidrug efflux transporter; transposase IS4 family protein 152431 10814433 Flexsi_0147 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602409.1 151382 R 717231 CDS YP_004602410.1 336322443 10814434 complement(152637..155702) 1 NC_015672.1 PFAM: AcrB/AcrD/AcrF family; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_1449 RND efflux system membrane fusion protein; PFAM: Secretion protein HlyD; SPTR: RND efflux system, membrane fusion protein; TIGRFAM: Secretion protein HlyD; acriflavin resistance protein 155702 10814434 Flexsi_0148 Flexistipes sinusarabici DSM 4947 acriflavin resistance protein YP_004602410.1 152637 R 717231 CDS YP_004602411.1 336322444 10814435 complement(155803..156945) 1 NC_015672.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_1450 RND efflux system outer membrane lipoprotein; PFAM: Outer membrane efflux protein; SPTR: RND efflux system, outer membrane lipoprotein; RND family efflux transporter MFP subunit 156945 10814435 Flexsi_0149 Flexistipes sinusarabici DSM 4947 RND family efflux transporter MFP subunit YP_004602411.1 155803 R 717231 CDS YP_004602412.1 336322445 10814436 complement(156942..158219) 1 NC_015672.1 PFAM: Outer membrane efflux protein; InterPro IPR001647; KEGG: tcx:Tcr_1884 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; outer membrane efflux protein 158219 10814436 Flexsi_0150 Flexistipes sinusarabici DSM 4947 outer membrane efflux protein YP_004602412.1 156942 R 717231 CDS YP_004602413.1 336322446 10814437 complement(158216..158848) 1 NC_015672.1 PFAM: Bacterial regulatory proteins, tetR family; InterPro IPR013096; KEGG: hor:Hore_08490 cupin 2 conserved barrel domain protein; PFAM: Cupin 2, conserved barrel; SPTR: Cupin 2 conserved barrel domain protein; regulatory protein TetR 158848 10814437 Flexsi_0151 Flexistipes sinusarabici DSM 4947 regulatory protein TetR YP_004602413.1 158216 R 717231 CDS YP_004602414.1 336322447 10814438 159367..159684 1 NC_015672.1 PFAM: Cupin domain; COGs: COG1252 NADH dehydrogenase FAD-containing subunit; InterPro IPR013027; KEGG: ddf:DEFDS_1073 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: NADH dehydrogenase (ubiquinone); SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; cupin 159684 10814438 Flexsi_0152 Flexistipes sinusarabici DSM 4947 cupin YP_004602414.1 159367 D 717231 CDS YP_004602415.1 336322448 10814439 159735..160967 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; NADH dehydrogenase (ubiquinone) 160967 10814439 Flexsi_0153 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (ubiquinone) YP_004602415.1 159735 D 717231 CDS YP_004602416.1 336322449 10814440 161115..162434 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR000620; KEGG: dak:DaAHT2_2429 protein of unknown function DUF6 transmembrane; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; transposase IS4 family protein 162434 10814440 Flexsi_0154 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602416.1 161115 D 717231 CDS YP_004602417.1 336322450 10814441 162854..163753 1 NC_015672.1 PFAM: EamA-like transporter family; KEGG: dtu:Dtur_1639 nitroreductase; SPTR: Nitroreductase; hypothetical protein 163753 10814441 Flexsi_0155 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602417.1 162854 D 717231 CDS YP_004602418.1 336322451 10814442 164296..164493 1 NC_015672.1 PFAM: Nitroreductase family; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; nitroreductase 164493 10814442 Flexsi_0156 Flexistipes sinusarabici DSM 4947 nitroreductase YP_004602418.1 164296 D 717231 CDS YP_004602419.1 336322452 10814443 164615..166291 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG3189 conserved hypothetical protein; InterPro IPR007438; KEGG: noc:Noc_2090 hypothetical protein; PFAM: Protein of unknown function DUF488; SPTR: Putative uncharacterized protein; transposase IS4 family protein 166291 10814443 Flexsi_0157 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602419.1 164615 D 717231 CDS YP_004602420.1 336322453 10814444 166414..166782 1 NC_015672.1 PFAM: Protein of unknown function, DUF488; hypothetical protein 166782 10814444 Flexsi_0158 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602420.1 166414 D 717231 CDS YP_004602421.1 336322454 10814445 166811..166957 1 NC_015672.1 COGs: COG0544 FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor); HAMAP: Trigger factor; InterPro IPR005215:IPR008881:IPR001179:IPR008880; KEGG: ddf:DEFDS_0192 trigger factor; PFAM: Trigger factor, ribosome-binding, bacterial; Peptidyl-prolyl cis-trans isomerase, FKBP-type; Trigger factor, C-terminal, bacterial; SPTR: Trigger factor; TIGRFAM: Trigger factor; hypothetical protein 166957 10814445 Flexsi_0159 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602421.1 166811 D 717231 CDS YP_004602422.1 336322455 10814446 167196..168575 1 NC_015672.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; Bacterial trigger factor protein (TF); Bacterial trigger factor protein (TF) C-terminus; TIGRFAM: trigger factor; COGs: COG0740 Protease subunit of ATP-dependent Clp protease; HAMAP: ATP-dependent Clp protease proteolytic subunit; InterPro IPR001907; KEGG: cni:Calni_1041 ATP-dependent clp protease proteolytic subunit ClpP; PFAM: Peptidase S14, ClpP; PRIAM: Endopeptidase Clp; SPTR: ATP-dependent Clp protease proteolytic subunit; TIGRFAM: Peptidase S14, ClpP; trigger factor Tig 168575 10814446 Flexsi_0160 Flexistipes sinusarabici DSM 4947 trigger factor Tig YP_004602422.1 167196 D 717231 CDS YP_004602423.1 336322456 10814447 168575..169162 1 NC_015672.1 PFAM: Clp protease; TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; COGs: COG1219 ATP-dependent protease Clp ATPase subunit; HAMAP: Clp protease, ATP-binding subunit ClpX; InterProIPR004487:IPR003593:IPR010603:IPR013093:IPR 019489; KEGG: ddf:DEFDS_0194 ATP-dependent Clp protease ATP-binding subunit; PFAM: ATPase associated with various cellular activities, AAA-2; Zinc finger, C4-type; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease ATP-binding subunit ClpX; TIGRFAM: Clp protease, ATP-binding subunit ClpX; ATP-dependent Clp protease proteolytic subunit 169162 10814447 Flexsi_0161 Flexistipes sinusarabici DSM 4947 ATP-dependent Clp protease proteolytic subunit YP_004602423.1 168575 D 717231 CDS YP_004602424.1 336322457 10814448 169227..170468 1 NC_015672.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ClpX C4-type zinc finger; TIGRFAM: endopeptidase Clp ATP-binding regulatory subunit (clpX); COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269; KEGG: ddf:DEFDS_0195 ATP-dependent Lon protease; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; ATP-dependent Clp protease ATP-binding subunit clpX 170468 10814448 Flexsi_0162 Flexistipes sinusarabici DSM 4947 ATP-dependent Clp protease ATP-binding subunit clpX YP_004602424.1 169227 D 717231 CDS YP_004602425.1 336322458 10814449 170538..172871 1 NC_015672.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; HAMAP: Ribosomal protein S21; InterPro IPR001911; KEGG: ddf:DEFDS_0196 30S ribosomal protein S21; PFAM: Ribosomal protein S21; SPTR: 30S ribosomal protein S21; TIGRFAM: Ribosomal protein S21; anti-sigma H sporulation factor LonB 172871 10814449 Flexsi_0163 Flexistipes sinusarabici DSM 4947 anti-sigma H sporulation factor LonB YP_004602425.1 170538 D 717231 CDS YP_004602426.1 336322459 10814450 172871..173095 1 NC_015672.1 PFAM: Ribosomal protein S21; TIGRFAM: ribosomal protein S21; COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: cni:Calni_1837 hypothetical protein; PFAM: Protein of unknown function DUF111; SPTR: Putative uncharacterized protein; TIGRFAM: Protein of unknown function DUF111; 30S ribosomal protein S21 173095 10814450 Flexsi_0164 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S21 YP_004602426.1 172871 D 717231 CDS YP_004602427.1 336322460 10814451 complement(173127..174287) 1 NC_015672.1 PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein; COGs: COG2110 phosphatase homologous to the C-terminal domain of histone macroH2A1; InterPro IPR002589; KEGG: dau:Daud_0314 appr-1-p processing domain-containing protein; PFAM: Appr-1-p processing; SMART: Appr-1-p processing; SPTR: Appr-1-p processing domain protein; hypothetical protein 174287 10814451 Flexsi_0165 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602427.1 173127 R 717231 CDS YP_004602428.1 336322461 10814452 174397..174927 1 NC_015672.1 PFAM: Macro domain; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: dde:Dde_0146 putative glycine betaine/L-proline ABC transporter solute-binding protein; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Putative glycine betaine/L-proline ABC transporter, solute-binding protein; Appr-1-p processing protein 174927 10814452 Flexsi_0166 Flexistipes sinusarabici DSM 4947 Appr-1-p processing protein YP_004602428.1 174397 D 717231 CDS YP_004602429.1 336322462 10814453 complement(175129..176052) 1 NC_015672.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein; COGs: COG0499 S-adenosylhomocysteine hydrolase; HAMAP: Adenosylhomocysteinase; InterPro IPR000043:IPR015878; KEGG: cni:Calni_0569 adenosylhomocysteinase; PFAM: S-adenosyl-L-homocysteine hydrolase; S-adenosyl-L-homocysteine hydrolase, NAD binding; PRIAM: Adenosylhomocysteinase; SPTR: Adenosylhomocysteinase; TIGRFAM: S-adenosyl-L-homocysteine hydrolase; glycine betaine ABC transporter periplasmic subunit 176052 10814453 Flexsi_0167 Flexistipes sinusarabici DSM 4947 glycine betaine ABC transporter periplasmic subunit YP_004602429.1 175129 R 717231 CDS YP_004602430.1 336322463 10814454 complement(176766..178178) 1 NC_015672.1 PFAM: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; S-adenosyl-L-homocysteine hydrolase; TIGRFAM: adenosylhomocysteinase; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR013751; KEGG: ddf:DEFDS_1929 thiolase family protein; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; PRIAM: Propanoyl-CoA C-acyltransferase; SPTR: Thiolase family protein; adenosylhomocysteinase 178178 10814454 Flexsi_0168 Flexistipes sinusarabici DSM 4947 adenosylhomocysteinase YP_004602430.1 176766 R 717231 CDS YP_004602431.1 336322464 10814455 178519..179979 1 NC_015672.1 PFAM: Thiolase, C-terminal domain; manually curated; propanoyl-CoA C-acyltransferase 179979 10814455 Flexsi_0169 Flexistipes sinusarabici DSM 4947 propanoyl-CoA C-acyltransferase YP_004602431.1 178519 D 717231 CDS YP_004602432.1 336322465 10814457 complement(180332..181651) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 181651 10814457 Flexsi_0171 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602432.1 180332 R 717231 CDS YP_004602433.1 336322466 10814459 182977..184092 1 NC_015672.1 COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006268:IPR006218; KEGG: ddf:DEFDS_0830 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; hypothetical protein 184092 10814459 Flexsi_0173 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602433.1 182977 D 717231 CDS YP_004602434.1 336322467 10814460 complement(184197..185207) 1 NC_015672.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG1151 6Fe-6S prismane cluster-containing protein; HAMAP: Hybrid cluster protein; InterPro IPR010048:IPR004137; KEGG: cni:Calni_0496 hybrid cluster protein; PFAM: Prismane; SPTR: Hydroxylamine reductase; TIGRFAM: Hybrid cluster protein; phospho-2-dehydro-3-deoxyheptonate aldolase 185207 10814460 Flexsi_0174 Flexistipes sinusarabici DSM 4947 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004602434.1 184197 R 717231 CDS YP_004602435.1 336322468 10814461 complement(185502..187172) 1 NC_015672.1 PFAM: Prismane/CO dehydrogenase family; TIGRFAM: hydroxylamine reductase; COGs: COG0664 cAMP-binding protein - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinase; InterPro IPR000595:IPR001808; KEGG: cni:Calni_0497 transcriptional regulator, crp/fnr family; PFAM: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SMART: Cyclic nucleotide-binding; HTH transcriptional regulator, Crp; SPTR: Transcriptional regulator, Crp/Fnr family; hydroxylamine reductase 187172 10814461 Flexsi_0175 Flexistipes sinusarabici DSM 4947 hydroxylamine reductase YP_004602435.1 185502 R 717231 CDS YP_004602436.1 336322469 10814462 187277..187936 1 NC_015672.1 PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; KEGG: ddf:DEFDS_0027 hypothetical protein; SPTR: Putative uncharacterized protein; Crp/Fnr family transcriptional regulator 187936 10814462 Flexsi_0176 Flexistipes sinusarabici DSM 4947 Crp/Fnr family transcriptional regulator YP_004602436.1 187277 D 717231 CDS YP_004602437.1 336322470 10814463 187933..189960 1 NC_015672.1 COGs: COG0614 ABC-type Fe3+-hydroxamate transport system periplasmic component; InterPro IPR002491; KEGG: tdn:Suden_0117 periplasmic binding protein; PFAM: Periplasmic binding protein; SPTR: Periplasmic binding protein; hypothetical protein 189960 10814463 Flexsi_0177 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602437.1 187933 D 717231 CDS YP_004602438.1 336322471 10814464 190668..191459 1 NC_015672.1 PFAM: Periplasmic binding protein; COGs: COG4139 ABC-type cobalamin transport system permease component; InterPro IPR000522; KEGG: aoe:Clos_0916 transport system permease protein; PFAM: Bacterial transport system permease protein; SPTR: Transport system permease protein; ABC transporter periplasmic protein 191459 10814464 Flexsi_0178 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic protein YP_004602438.1 190668 D 717231 CDS YP_004602439.1 336322472 10814465 191429..192415 1 NC_015672.1 PFAM: FecCD transport family; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003593:IPR003439; KEGG: cpr:CPR_0781 iron(III) dicitrate transport permease-like protein YusV; PFAM: ABC transporter-like; PRIAM: Iron-chelate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Ferrichrome transport ATP-binding protein FhuC; ABC transporter 192415 10814465 Flexsi_0179 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004602439.1 191429 D 717231 CDS YP_004602440.1 336322473 10814466 192412..193164 1 NC_015672.1 PFAM: ABC transporter; COGs: COG4206 Outer membrane cobalamin receptor protein; InterPro IPR012910:IPR000531; KEGG: cni:Calni_1879 TonB-dependent receptor plug; PFAM: TonB-dependent receptor, plug; TonB-dependent receptor, beta-barrel; SPTR: TonB-dependent receptor plug; iron-chelate-transporting ATPase 193164 10814466 Flexsi_0180 Flexistipes sinusarabici DSM 4947 iron-chelate-transporting ATPase YP_004602440.1 192412 D 717231 CDS YP_004602441.1 336322474 10814467 193777..195669 1 NC_015672.1 PFAM: TonB-dependent Receptor Plug Domain; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR006260:IPR003538; KEGG: hpc:HPPC_06595 siderophore-mediated iron transport protein (TonB); PFAM: Gram-negative bacterial tonB protein; SPTR: Siderophore-mediated iron transport protein (TonB); TIGRFAM: TonB, C-terminal; TonB-dependent receptor plug 195669 10814467 Flexsi_0181 Flexistipes sinusarabici DSM 4947 TonB-dependent receptor plug YP_004602441.1 193777 D 717231 CDS YP_004602442.1 336322475 10814468 195650..196423 1 NC_015672.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; COGs: COG0785 Cytochrome c biogenesis protein; InterPro IPR003834; KEGG: ddf:DEFDS_0172 cytochrome c-type biogenesis protein; PFAM: Cytochrome c assembly protein, transmembrane region; SPTR: Cytochrome c-type biogenesis protein; TonB family protein 196423 10814468 Flexsi_0182 Flexistipes sinusarabici DSM 4947 TonB family protein YP_004602442.1 195650 D 717231 CDS YP_004602443.1 336322476 10814469 complement(196415..197149) 1 NC_015672.1 PFAM: Cytochrome C biogenesis protein transmembrane region; COGs: COG2332 Cytochrome c-type biogenesis protein CcmE; InterPro IPR004329; KEGG: cni:Calni_1688 CcmE/CycJ protein; PFAM: CcmE/CycJ protein; SPTR: CcmE/CycJ protein; cytochrome c biogenesis protein transmembrane subunit 197149 10814469 Flexsi_0183 Flexistipes sinusarabici DSM 4947 cytochrome c biogenesis protein transmembrane subunit YP_004602443.1 196415 R 717231 CDS YP_004602444.1 336322477 10814470 197273..197677 1 NC_015672.1 PFAM: CcmE; InterPro IPR003660; KEGG: gme:Gmet_0018 metal dependent phosphohydrolase; PFAM: HAMP linker domain; SMART: HAMP linker domain; SPTR: Metal dependent phosphohydrolase; CcmE/CycJ protein 197677 10814470 Flexsi_0184 Flexistipes sinusarabici DSM 4947 CcmE/CycJ protein YP_004602444.1 197273 D 717231 CDS YP_004602445.1 336322478 10814471 complement(198367..199179) 1 NC_015672.1 PFAM: HAMP domain; Protein of unknown function (DUF3365); histidine kinase HAMP region domain-containing protein 199179 10814471 Flexsi_0185 Flexistipes sinusarabici DSM 4947 histidine kinase HAMP region domain-containing protein YP_004602445.1 198367 R 717231 CDS YP_004602446.1 336322479 10814472 complement(199179..199664) 1 NC_015672.1 COGs: COG0350 Methylated DNA-protein cysteine methyltransferase; InterPro IPR014048; KEGG: cni:Calni_0600 methylated-DNA/protein-cysteinemethyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; SPTR:Methylated-DNA/protein-cysteinemethyltransfera se; TIGRFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase, DNA binding; hypothetical protein 199664 10814472 Flexsi_0186 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602446.1 199179 R 717231 CDS YP_004602447.1 336322480 10814473 complement(199779..200249) 1 NC_015672.1 PFAM: 6-O-methylguanine DNA methyltransferase, DNA binding domain; TIGRFAM: O-6-methylguanine DNA methyltransferase; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR006027:IPR001678; KEGG: ddf:DEFDS_1996 tRNA/rRNA methyltransferase; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; NusB/RsmB/TIM44; SPTR: tRNA/rRNA methyltransferase; methylated-DNA--protein-cysteine methyltransferase 200249 10814473 Flexsi_0187 Flexistipes sinusarabici DSM 4947 methylated-DNA--protein-cysteine methyltransferase YP_004602447.1 199779 R 717231 CDS YP_004602448.1 336322481 10814474 complement(200331..201512) 1 NC_015672.1 PFAM: NOL1/NOP2/sun family; NusB family; COGs: COG0501 Zn-dependent protease with chaperone function; HAMAP: protease htpX; InterPro IPR001915; KEGG: ddf:DEFDS_1995 peptidase M48 family; PFAM: Peptidase M48, Ste24p; SPTR: Protease HtpX homolog; Fmu (Sun) domain-containing protein 201512 10814474 Flexsi_0188 Flexistipes sinusarabici DSM 4947 Fmu (Sun) domain-containing protein YP_004602448.1 200331 R 717231 CDS YP_004602449.1 336322482 10814475 complement(201505..202353) 1 NC_015672.1 PFAM: Peptidase family M48; COGs: COG1852 conserved hypothetical protein; InterPro IPR002829; KEGG: cni:Calni_0072 hypothetical protein; PFAM: Protein of unknown function DUF116; SPTR: Putative uncharacterized protein; protease htpX 202353 10814475 Flexsi_0189 Flexistipes sinusarabici DSM 4947 protease htpX YP_004602449.1 201505 R 717231 CDS YP_004602450.1 336322483 10814476 complement(202364..203149) 1 NC_015672.1 PFAM: Protein of unknown function DUF116; COGs: COG0223 Methionyl-tRNA formyltransferase; HAMAP: Methionyl-tRNA formyltransferase; InterPro IPR005794:IPR002376:IPR005793; KEGG: ddf:DEFDS_1994 methionyl-tRNA formyltransferase; PFAM: Formyl transferase, C-terminal; Formyl transferase, N-terminal; PRIAM: Methionyl-tRNA formyltransferase; SPTR: Methionyl-tRNA formyltransferase; TIGRFAM: Methionyl-tRNA formyltransferase; hypothetical protein 203149 10814476 Flexsi_0190 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602450.1 202364 R 717231 CDS YP_004602451.1 336322484 10814477 complement(203139..204116) 1 NC_015672.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; TIGRFAM: methionyl-tRNA formyltransferase; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_1993 aminotransferase I and II; PFAM: Aminotransferase, class I/II; PRIAM: LL-diaminopimelate aminotransferase; SPTR: Aminotransferase, I and II; methionyl-tRNA formyltransferase 204116 10814477 Flexsi_0191 Flexistipes sinusarabici DSM 4947 methionyl-tRNA formyltransferase YP_004602451.1 203139 R 717231 CDS YP_004602452.1 336322485 10814478 complement(204149..205378) 1 NC_015672.1 PFAM: Aminotransferase class I and II; COGs: COG0053 Co/Zn/Cd cation transporter; InterPro IPR002524; KEGG: ddf:DEFDS_1992 cation efflux protein; PFAM: Cation efflux protein; SPTR: Cation efflux protein; TIGRFAM: Cation efflux protein; LL-diaminopimelate aminotransferase 205378 10814478 Flexsi_0192 Flexistipes sinusarabici DSM 4947 LL-diaminopimelate aminotransferase YP_004602452.1 204149 R 717231 CDS YP_004602453.1 336322486 10814479 complement(205428..206342) 1 NC_015672.1 PFAM: Cation efflux family; TIGRFAM: cation diffusion facilitator family transporter; InterPro IPR018710; KEGG: ddf:DEFDS_1990 hypothetical protein; PFAM: Protein of unknown function DUF2232, membrane; SPTR: Putative uncharacterized protein; cation diffusion facilitator family transporter 206342 10814479 Flexsi_0193 Flexistipes sinusarabici DSM 4947 cation diffusion facilitator family transporter YP_004602453.1 205428 R 717231 CDS YP_004602454.1 336322487 10814480 complement(206339..207259) 1 NC_015672.1 PFAM: Predicted membrane protein (DUF2232); COGs: COG0238 Ribosomal protein S18; HAMAP: 30S ribosomal protein S18; InterPro IPR001648; KEGG: dap:Dacet_0006 30S ribosomal protein S18; PFAM: Ribosomal protein S18; SPTR: 30S ribosomal protein S18; TIGRFAM: Ribosomal protein S18; hypothetical protein 207259 10814480 Flexsi_0194 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602454.1 206339 R 717231 CDS YP_004602455.1 336322488 10814481 complement(207307..207534) 1 NC_015672.1 PFAM: Ribosomal protein S18; TIGRFAM: ribosomal protein S18; COGs: COG0629 Single-stranded DNA-binding protein; InterPro IPR011344:IPR000424; KEGG: ddf:DEFDS_1988 single-strand DNA binding protein; PFAM: Primosome PriB/single-strand DNA-binding; SPTR: Single-stranded DNA-binding protein; TIGRFAM: Single-strand DNA-binding; 30S ribosomal protein S18 207534 10814481 Flexsi_0195 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S18 YP_004602455.1 207307 R 717231 CDS YP_004602456.1 336322489 10814482 complement(207560..207994) 1 NC_015672.1 PFAM: Single-strand binding protein family; TIGRFAM: single stranded DNA-binding protein (ssb); COGs: COG0360 Ribosomal protein S6; HAMAP: Ribosomal protein S6, bacterial-like; InterPro IPR000529:IPR020814; KEGG: cni:Calni_0515 ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like; SPTR: 30S ribosomal protein S6; TIGRFAM: Ribosomal protein S6; single-strand binding protein 207994 10814482 Flexsi_0196 Flexistipes sinusarabici DSM 4947 single-strand binding protein YP_004602456.1 207560 R 717231 CDS YP_004602457.1 336322490 10814483 complement(207998..208465) 1 NC_015672.1 PFAM: Ribosomal protein S6; TIGRFAM: ribosomal protein S6; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006225:IPR002942:IPR006145; KEGG: ddf:DEFDS_1986 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RluC/RluD; 30S ribosomal protein S6 208465 10814483 Flexsi_0197 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S6 YP_004602457.1 207998 R 717231 CDS YP_004602458.1 336322491 10814484 208600..209523 1 NC_015672.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase, RluA family; COGs: COG0838 NADH:ubiquinone oxidoreductase subunit 3 (chain A); HAMAP: NAD(P)H-quinone oxidoreductase subunit 3; InterPro IPR000440; KEGG: ddf:DEFDS_1985 NADH-quinone oxidoreductase subunit A; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 3; SPTR: NADH-quinone oxidoreductase subunit; RluA family pseudouridine synthase 209523 10814484 Flexsi_0198 Flexistipes sinusarabici DSM 4947 RluA family pseudouridine synthase YP_004602458.1 208600 D 717231 CDS YP_004602459.1 336322492 10814485 209743..210096 1 NC_015672.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase, chain 3; COGs: COG0377 NADH:ubiquinone oxidoreductase 20 kD subunit and related Fe-S oxidoreductase; HAMAP: NAD(P)H-quinone oxidoreductase subunit K; InterPro IPR006138:IPR006137; KEGG: cni:Calni_0313 NADH dehydrogenase subunit B; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, 20kDa subunit; NAD(P)H-quinone oxidoreductase subunit 3 210096 10814485 Flexsi_0199 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit 3 YP_004602459.1 209743 D 717231 CDS YP_004602460.1 336322493 10814486 210087..210563 1 NC_015672.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, B subunit; COGs: COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit; InterPro IPR001268; KEGG: cni:Calni_0314 NADH dehydrogenase subunit C; PFAM: NADH:ubiquinone oxidoreductase, 30kDa subunit; SPTR: NADH-quinone oxidoreductase subunit C; NAD(P)H-quinone oxidoreductase subunit K 210563 10814486 Flexsi_0200 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit K YP_004602460.1 210087 D 717231 CDS YP_004602461.1 336322494 10814487 210575..211069 1 NC_015672.1 PFAM: Respiratory-chain NADH dehydrogenase, 30 Kd subunit; COGs: COG0649 NADH:ubiquinone oxidoreductase 49 kD subunit 7; HAMAP: NAD(P)H-quinone oxidoreductase subunit H; InterPro IPR010219:IPR001135; KEGG: ddf:DEFDS_1982 NADH-quinone oxidoreductase subunit D; PFAM: NADH-quinone oxidoreductase, subunit D; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, D subunit; TIGRFAM: NADH dehydrogenase I, D subunit; NADH dehydrogenase (ubiquinone) 30 kDa subunit 211069 10814487 Flexsi_0201 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (ubiquinone) 30 kDa subunit YP_004602461.1 210575 D 717231 CDS YP_004602462.1 336322495 10814488 211086..212291 1 NC_015672.1 PFAM: Respiratory-chain NADH dehydrogenase, 49 Kd subunit; TIGRFAM: NADH dehydrogenase I, D subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: cni:Calni_0316 NADH dehydrogenase subunit E; PFAM: NADH:ubiquinone oxidoreductase, 24kDa subunit; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH dehydrogenase subunit E; NAD(P)H-quinone oxidoreductase subunit H 212291 10814488 Flexsi_0202 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit H YP_004602462.1 211086 D 717231 CDS YP_004602463.1 336322496 10814489 212304..212804 1 NC_015672.1 PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; TIGRFAM: NADH-quinone oxidoreductase, E subunit; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterPro IPR011538:IPR019554:IPR019575:IPR001450; KEGG: ddf:DEFDS_1980 NADH-quinone oxidoreductase subunit F; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, F subunit; NADH dehydrogenase (quinone) 212804 10814489 Flexsi_0203 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004602463.1 212304 D 717231 CDS YP_004602464.1 336322497 10814490 212814..214604 1 NC_015672.1 PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR001041:IPR019574:IPR006963:IPR006656:IPR 006657; KEGG: ddf:DEFDS_1979 NADH-quinone oxidoreductase subunit G; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; Molybdopterin oxidoreductase Fe4S4 region; Molybdopterin oxidoreductase; Molydopterin dinucleotide-binding region; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, G subunit; NADH dehydrogenase (quinone) 214604 10814490 Flexsi_0204 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004602464.1 212814 D 717231 CDS YP_004602465.1 336322498 10814491 214621..216918 1 NC_015672.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: NADH-quinone oxidoreductase, chain G; COGs: COG1005 NADH:ubiquinone oxidoreductase subunit 1 (chain H); HAMAP: NAD(P)H-quinone oxidoreductase subunit 1; InterPro IPR001694; KEGG: ddf:DEFDS_1978 NADH-quinone oxidoreductase subunit H; PFAM: NADH:ubiquinone oxidoreductase, subunit 1; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit H; NADH dehydrogenase (quinone) 216918 10814491 Flexsi_0205 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004602465.1 214621 D 717231 CDS YP_004602466.1 336322499 10814492 216982..217968 1 NC_015672.1 PFAM: NADH dehydrogenase; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); HAMAP: NADH-quinone oxidoreductase, chain I; InterPro IPR010226:IPR001450; KEGG: ddf:DEFDS_1977 NADH-quinone oxidoreductase subunit I; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: NADH dehydrogenase; SPTR: NADH-quinone oxidoreductase subunit I; TIGRFAM: NADH-quinone oxidoreductase, chain I; NAD(P)H-quinone oxidoreductase subunit 1 217968 10814492 Flexsi_0206 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit 1 YP_004602466.1 216982 D 717231 CDS YP_004602467.1 336322500 10814493 217979..218413 1 NC_015672.1 PFAM: 4Fe-4S binding domain; TIGRFAM: NADH-quinone oxidoreductase, chain I; COGs: COG0839 NADH:ubiquinone oxidoreductase subunit 6 (chain J); InterPro IPR001457; KEGG: cni:Calni_0322 NADH dehydrogenase subunit J; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase, chain 6; SPTR: NADH dehydrogenase subunit J; NAD(P)H-quinone oxidoreductase subunit I 218413 10814493 Flexsi_0207 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit I YP_004602467.1 217979 D 717231 CDS YP_004602468.1 336322501 10814494 218417..218917 1 NC_015672.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 6; COGs: COG0713 NADH:ubiquinone oxidoreductase subunit 11 or 4L (chain K); HAMAP: NAD(P)H-quinone oxidoreductase subunit 4L; InterPro IPR001133; KEGG: ddf:DEFDS_1975 NADH-quinone oxidoreductase subunit K; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; SPTR: NADH-quinone oxidoreductase subunit K; NADH-ubiquinone/plastoquinone oxidoreductase chain 6 218917 10814494 Flexsi_0208 Flexistipes sinusarabici DSM 4947 NADH-ubiquinone/plastoquinone oxidoreductase chain 6 YP_004602468.1 218417 D 717231 CDS YP_004602469.1 336322502 10814495 218930..219229 1 NC_015672.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR003945:IPR001516:IPR001750; KEGG: ddf:DEFDS_1974 NADH-quinone oxidoreductase subunit L; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; NADH:ubiquinone oxidoreductase, chain 5/L, N-terminal; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, L subunit; TIGRFAM: NADH-plastoquinone oxidoreductase, chain 5; NAD(P)H-quinone oxidoreductase subunit 4L 219229 10814495 Flexsi_0209 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit 4L YP_004602469.1 218930 D 717231 CDS YP_004602470.1 336322503 10814496 219239..221152 1 NC_015672.1 PFAM: NADH-Ubiquinone oxidoreductase (complex I), chain 5 C-terminus; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain L; COGs: COG1008 NADH:ubiquinone oxidoreductase subunit 4 (chain M); InterPro IPR010227:IPR001750; KEGG: ddf:DEFDS_1973 NADH-quinone oxidoreductase subunit M; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase, M subunit; TIGRFAM: NADH-quinone oxidoreductase, chain M; proton-translocating NADH-quinone oxidoreductase subunit L 221152 10814496 Flexsi_0210 Flexistipes sinusarabici DSM 4947 proton-translocating NADH-quinone oxidoreductase subunit L YP_004602470.1 219239 D 717231 CDS YP_004602471.1 336322504 10814497 221163..222656 1 NC_015672.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; COGs: COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N); HAMAP: NAD(P)H-quinone oxidoreductase subunit 2; InterPro IPR010096:IPR001750; KEGG: cni:Calni_0326 NADH dehydrogenase subunit N; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH-quinone oxidoreductase subunit N; TIGRFAM: NADH-quinone oxidoreductase, chain N; proton-translocating NADH-quinone oxidoreductase subunit M 222656 10814497 Flexsi_0211 Flexistipes sinusarabici DSM 4947 proton-translocating NADH-quinone oxidoreductase subunit M YP_004602471.1 221163 D 717231 CDS YP_004602472.1 336322505 10814498 222667..224094 1 NC_015672.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; InterPro IPR003251; KEGG: cni:Calni_0327 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; NAD(P)H-quinone oxidoreductase subunit 2 224094 10814498 Flexsi_0212 Flexistipes sinusarabici DSM 4947 NAD(P)H-quinone oxidoreductase subunit 2 YP_004602472.1 222667 D 717231 CDS YP_004602473.1 336322506 10814499 224114..224578 1 NC_015672.1 PFAM: Rubrerythrin; COGs: COG0240 Glycerol-3-phosphate dehydrogenase; HAMAP: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; InterPro IPR011128:IPR006109; KEGG: cni:Calni_0959 glycerol 3-phosphate dehydrogenase (nad(p)+); PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase, C-terminal; NAD-dependent glycerol-3-phosphate dehydrogenase, N-terminal; SPTR: Glycerol-3-phosphate dehydrogenase [NAD(P)+]; rubrerythrin 224578 10814499 Flexsi_0213 Flexistipes sinusarabici DSM 4947 rubrerythrin YP_004602473.1 224114 D 717231 CDS YP_004602474.1 336322507 10814500 225007..226002 1 NC_015672.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase C-terminus; NAD-dependent glycerol-3-phosphate dehydrogenase N-terminus; COGs: COG0836 Mannose-1-phosphate guanylyltransferase; InterPro IPR006375:IPR005835:IPR001538; KEGG: tcx:Tcr_1678 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; Nucleotidyl transferase; PRIAM: Mannose-1-phosphate guanylyltransferase; SPTR: Mannose-1-phosphate guanylyltransferase (GDP); TIGRFAM: Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; glycerol-3-phosphate dehydrogenase (NAD(P)+) 226002 10814500 Flexsi_0214 Flexistipes sinusarabici DSM 4947 glycerol-3-phosphate dehydrogenase (NAD(P)+) YP_004602474.1 225007 D 717231 CDS YP_004602475.1 336322508 10814501 226029..227438 1 NC_015672.1 PFAM: Nucleotidyl transferase; Mannose-6-phosphate isomerase; TIGRFAM: mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR004772:IPR003445; KEGG: dap:Dacet_2985 potassium uptake protein, TrkH family; PFAM: Cation transporter; SPTR: Potassium uptake protein, TrkH family; TIGRFAM: Potassium uptake protein TrkH; mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 227438 10814501 Flexsi_0215 Flexistipes sinusarabici DSM 4947 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase YP_004602475.1 226029 D 717231 CDS YP_004602476.1 336322509 10814502 complement(227442..228893) 1 NC_015672.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: dap:Dacet_2986 TrkA-N domain protein; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: TrkA-N domain protein; TrkH family potassium uptake protein 228893 10814502 Flexsi_0216 Flexistipes sinusarabici DSM 4947 TrkH family potassium uptake protein YP_004602476.1 227442 R 717231 CDS YP_004602477.1 336322510 10814503 complement(228898..230241) 1 NC_015672.1 PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0025 NhaP-type Na+/H+ and K+/H+ antiporter; InterPro IPR006153; KEGG: pca:Pcar_0560 hypothetical protein; PFAM: Cation/H+ exchanger; SPTR: Sodium/hydrogen exchanger; TrkA-N domain-containing protein 230241 10814503 Flexsi_0217 Flexistipes sinusarabici DSM 4947 TrkA-N domain-containing protein YP_004602477.1 228898 R 717231 CDS YP_004602478.1 336322511 10814504 230481..231692 1 NC_015672.1 PFAM: Sodium/hydrogen exchanger family; COGs: COG0116 N6-adenine-specific DNA methylase; InterPro IPR004114:IPR000241; KEGG: dat:HRM2_18410 putative RNA methylase family protein; PFAM: Putative RNA methylase; THUMP; PRIAM: rRNA (guanine-N(2)-)-methyltransferase; SPTR: Putative uncharacterized protein; sodium/hydrogen exchanger 231692 10814504 Flexsi_0218 Flexistipes sinusarabici DSM 4947 sodium/hydrogen exchanger YP_004602478.1 230481 D 717231 CDS YP_004602479.1 336322512 10814505 complement(231857..232993) 1 NC_015672.1 PFAM: Putative RNA methylase family UPF0020; THUMP domain; COGs: COG1278 Cold shock protein; InterPro IPR011129:IPR002059; KEGG: ddf:DEFDS_1633 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; rRNA (guanine-N(2)-)-methyltransferase 232993 10814505 Flexsi_0219 Flexistipes sinusarabici DSM 4947 rRNA (guanine-N(2)-)-methyltransferase YP_004602479.1 231857 R 717231 CDS YP_004602480.1 336322513 10814506 233259..233459 1 NC_015672.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1472 Beta-glucosidase-related glycosidase; InterPro IPR001764; KEGG: cte:CT0090 glycosy hydrolase family protein; PFAM: Glycoside hydrolase, family 3, N-terminal; SPTR: Glycosyl hydrolase, family 3; cold-shock DNA-binding domain-containing protein 233459 10814506 Flexsi_0220 Flexistipes sinusarabici DSM 4947 cold-shock DNA-binding domain-containing protein YP_004602480.1 233259 D 717231 CDS YP_004602481.1 336322514 10814507 complement(233496..234572) 1 NC_015672.1 PFAM: Glycosyl hydrolase family 3 N terminal domain; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003593:IPR003439; KEGG: sfu:Sfum_4019 putative ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; TIGRFAM: ATP-binding cassette protein, ChvD family; glycoside hydrolase family protein 234572 10814507 Flexsi_0221 Flexistipes sinusarabici DSM 4947 glycoside hydrolase family protein YP_004602481.1 233496 R 717231 CDS YP_004602482.1 336322515 10814508 234700..236385 1 NC_015672.1 PFAM: ABC transporter; TIGRFAM: ATP-binding cassette protein, ChvD family; KEGG: ddf:DEFDS_1656 hypothetical protein; SPTR: Putative uncharacterized protein; ChvD family ATP-binding protein 236385 10814508 Flexsi_0222 Flexistipes sinusarabici DSM 4947 ChvD family ATP-binding protein YP_004602482.1 234700 D 717231 CDS YP_004602483.1 336322516 10814509 complement(236490..237941) 1 NC_015672.1 COGs: COG1217 membrane GTPase involved in stress response; InterProIPR005225:IPR006298:IPR000795:IPR004161:IPR 000640; KEGG: cni:Calni_0168 gtp-binding protein TypA; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, C-terminal; SPTR: GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; Small GTP-binding protein; hypothetical protein 237941 10814509 Flexsi_0223 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602483.1 236490 R 717231 CDS YP_004602484.1 336322517 10814510 238166..240007 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; TIGRFAM: GTP-binding protein TypA/BipA; small GTP-binding protein domain; COGs: COG3671 membrane protein; KEGG: tbd:Tbd_1218 transmembrane protein; SPTR: Probable transmembrane protein; GTP-binding protein TypA 240007 10814510 Flexsi_0224 Flexistipes sinusarabici DSM 4947 GTP-binding protein TypA YP_004602484.1 238166 D 717231 CDS YP_004602485.1 336322518 10814511 complement(240004..240378) 1 NC_015672.1 KEGG: ddf:DEFDS_1670 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; transmembrane protein 240378 10814511 Flexsi_0225 Flexistipes sinusarabici DSM 4947 transmembrane protein YP_004602485.1 240004 R 717231 CDS YP_004602486.1 336322519 10814512 240742..240945 1 NC_015672.1 COGs: COG2208 Serine phosphatase RsbU regulator of sigma subunit; InterPro IPR003018:IPR001932:IPR001734:IPR010822; KEGG: ddf:DEFDS_1669 serine phosphatase; PFAM: Sporulation stage II, protein E C-terminal; GAF; Sodium/solute symporter; SMART: Protein phosphatase 2C-related; GAF; SPTR: Serine phosphatase; hypothetical protein 240945 10814512 Flexsi_0226 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602486.1 240742 D 717231 CDS YP_004602487.1 336322520 10814513 240938..244150 1 NC_015672.1 PFAM: GAF domain; Stage II sporulation protein E (SpoIIE); InterPro IPR012861; KEGG: phe:Phep_0601 protein of unknown function DUF1634; PFAM: Protein of unknown function DUF1634; protein serine/threonine phosphatase with GAF(s) sensor(s) 244150 10814513 Flexsi_0227 Flexistipes sinusarabici DSM 4947 protein serine/threonine phosphatase with GAF(s) sensor(s) YP_004602487.1 240938 D 717231 CDS YP_004602488.1 336322521 10814514 complement(244151..244489) 1 NC_015672.1 PFAM: Protein of unknown function (DUF1634); COGs: COG0730 permease; InterPro IPR002781; KEGG: ddf:DEFDS_1353 hypothetical protein; PFAM: Protein of unknown function DUF81; SPTR: Putative uncharacterized protein; hypothetical protein 244489 10814514 Flexsi_0228 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602488.1 244151 R 717231 CDS YP_004602489.1 336322522 10814515 complement(244492..245313) 1 NC_015672.1 PFAM: Sulfite exporter TauE/SafE; KEGG: cni:Calni_1694 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 245313 10814515 Flexsi_0229 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602489.1 244492 R 717231 CDS YP_004602490.1 336322523 10814516 245872..247476 1 NC_015672.1 COGs: COG0115 Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase; InterPro IPR005786:IPR001544; KEGG: cni:Calni_0961 branched chain amino acid aminotransferase apoenzyme; PFAM: Aminotransferase, class IV; PRIAM: Branched-chain-amino-acid transaminase; SPTR: Branched chain amino acid aminotransferase apoenzyme; TIGRFAM: Branched-chain amino acid aminotransferase II; hypothetical protein 247476 10814516 Flexsi_0230 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602490.1 245872 D 717231 CDS YP_004602491.1 336322524 10814517 247615..248703 1 NC_015672.1 PFAM: Aminotransferase class IV; TIGRFAM: branched-chain amino acid aminotransferase, group II; COGs: COG0068 Hydrogenase maturation factor; InterPro IPR004421:IPR001792:IPR011125:IPR006070; KEGG: ddf:DEFDS_1539 Ni-Fe hydrogenase maturation protein HypF; PFAM: Sua5/YciO/YrdC, N-terminal; Acylphosphatase-like; Zinc finger, HypF-type; SPTR: Ni-Fe hydrogenase maturation protein HypF; TIGRFAM: Hydrogenase maturation factor, HypF-type; branched-chain amino acid aminotransferase 248703 10814517 Flexsi_0231 Flexistipes sinusarabici DSM 4947 branched-chain amino acid aminotransferase YP_004602491.1 247615 D 717231 CDS YP_004602492.1 336322525 10814518 complement(248700..250946) 1 NC_015672.1 PFAM: HypF finger; yrdC domain; Acylphosphatase; TIGRFAM: [NiFe] hydrogenase maturation protein HypF; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR011023:IPR001678; KEGG: cni:Calni_1279 fmu (sun) domain protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Fmu (Sun) domain protein; TIGRFAM: Nop2p; (NiFe) hydrogenase maturation protein HypF 250946 10814518 Flexsi_0232 Flexistipes sinusarabici DSM 4947 (NiFe) hydrogenase maturation protein HypF YP_004602492.1 248700 R 717231 CDS YP_004602493.1 336322526 10814519 251022..252398 1 NC_015672.1 PFAM: NOL1/NOP2/sun family; TIGRFAM: NOL1/NOP2/sun family putative RNA methylase; COGs: COG2316 hydrolase (HD superfamily); InterPro IPR006675:IPR003607:IPR006674; KEGG: ddf:DEFDS_1810 HAD-superfamily hydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HAD-superfamily hydrolase; TIGRFAM: HDIG; RNA methylase 252398 10814519 Flexsi_0233 Flexistipes sinusarabici DSM 4947 RNA methylase YP_004602493.1 251022 D 717231 CDS YP_004602494.1 336322527 10814520 complement(252407..252961) 1 NC_015672.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG0682 Prolipoprotein diacylglyceryltransferase; HAMAP: Prolipoprotein diacylglyceryl transferase; InterPro IPR001640; KEGG: ddf:DEFDS_1811 prolipoprotein diacylglyceryl transferase; PFAM: Prolipoprotein diacylglyceryl transferase; SPTR: Prolipoprotein diacylglyceryl transferase; TIGRFAM: Prolipoprotein diacylglyceryl transferase; metal dependent phosphohydrolase 252961 10814520 Flexsi_0234 Flexistipes sinusarabici DSM 4947 metal dependent phosphohydrolase YP_004602494.1 252407 R 717231 CDS YP_004602495.1 336322528 10814521 complement(252958..253905) 1 NC_015672.1 PFAM: Prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; InterPro IPR000620; KEGG: cni:Calni_0245 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; prolipoprotein diacylglyceryl transferase 253905 10814521 Flexsi_0235 Flexistipes sinusarabici DSM 4947 prolipoprotein diacylglyceryl transferase YP_004602495.1 252958 R 717231 CDS YP_004602496.1 336322529 10814522 complement(253906..254790) 1 NC_015672.1 PFAM: EamA-like transporter family; InterPro IPR000620; KEGG: dap:Dacet_1633 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 254790 10814522 Flexsi_0236 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602496.1 253906 R 717231 CDS YP_004602497.1 336322530 10814523 complement(254784..255686) 1 NC_015672.1 PFAM: EamA-like transporter family; hypothetical protein 255686 10814523 Flexsi_0237 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602497.1 254784 R 717231 CDS YP_004602498.1 336322531 10814524 255928..256056 1 NC_015672.1 COGs: COG0280 Phosphotransacetylase; InterPro IPR004614:IPR002505; KEGG: cni:Calni_0766 phosphotransacetylase; PFAM: Phosphate acetyl/butaryl transferase; PRIAM: Phosphate acetyltransferase; SPTR: Phosphotransacetylase; TIGRFAM: Phosphate acetyltransferase; hypothetical protein 256056 10814524 Flexsi_0238 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602498.1 255928 D 717231 CDS YP_004602499.1 336322532 10814525 256105..257091 1 NC_015672.1 PFAM: Phosphate acetyl/butaryl transferase; TIGRFAM: phosphate acetyltransferase; COGs: COG0282 Acetate kinase; HAMAP: Acetate kinase; InterPro IPR004372:IPR000890; KEGG: cni:Calni_0765 acetate kinase; PFAM: Acetate/butyrate kinase; PRIAM: Acetate kinase; SPTR: Acetate kinase; TIGRFAM: Acetate kinase; phosphate acetyltransferase 257091 10814525 Flexsi_0239 Flexistipes sinusarabici DSM 4947 phosphate acetyltransferase YP_004602499.1 256105 D 717231 CDS YP_004602500.1 336322533 10814526 257109..258356 1 NC_015672.1 PFAM: Acetokinase family; TIGRFAM: acetate kinase; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR010066:IPR003593:IPR003439:IPR013563; KEGG: dap:Dacet_2504 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; acetate kinase 258356 10814526 Flexsi_0240 Flexistipes sinusarabici DSM 4947 acetate kinase YP_004602500.1 257109 D 717231 CDS YP_004602501.1 336322534 10814527 complement(258599..259609) 1 NC_015672.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR010066:IPR003593:IPR003439:IPR013563; KEGG: dal:Dalk_1531 oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide/dipeptide ABC transporter, ATPase subunit; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; oligopeptide/dipeptide ABC transporter ATPase 259609 10814527 Flexsi_0241 Flexistipes sinusarabici DSM 4947 oligopeptide/dipeptide ABC transporter ATPase YP_004602501.1 258599 R 717231 CDS YP_004602502.1 336322535 10814528 complement(259609..260589) 1 NC_015672.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dap:Dacet_2506 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; oligopeptide/dipeptide ABC transporter ATPase 260589 10814528 Flexsi_0242 Flexistipes sinusarabici DSM 4947 oligopeptide/dipeptide ABC transporter ATPase YP_004602502.1 259609 R 717231 CDS YP_004602503.1 336322536 10814529 complement(260597..261514) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dap:Dacet_2507 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; ABC transporter 261514 10814529 Flexsi_0243 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004602503.1 260597 R 717231 CDS YP_004602504.1 336322537 10814530 complement(261514..262491) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: drt:Dret_1361 extracellular solute-binding protein family 5; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Extracellular solute-binding protein family 5; ABC transporter 262491 10814530 Flexsi_0244 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004602504.1 261514 R 717231 CDS YP_004602505.1 336322538 10814531 complement(262549..264102) 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: ddf:DEFDS_1594 molybdopterin biosynthesis protein MoeA; PFAM: MoeA, N-terminal region, domain I/II; Molybdopterin binding; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis protein MoeA; TIGRFAM: Molybdenum cofactor synthesis; ABC transporter periplasmic protein 264102 10814531 Flexsi_0245 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic protein YP_004602505.1 262549 R 717231 CDS YP_004602506.1 336322539 10814532 264361..265581 1 NC_015672.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: ddf:DEFDS_1595 ribosomal large subunit pseudouridine synthase A; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Ribosomal large subunit pseudouridine synthase A; molybdenum cofactor synthesis domain-containing protein 265581 10814532 Flexsi_0246 Flexistipes sinusarabici DSM 4947 molybdenum cofactor synthesis domain-containing protein YP_004602506.1 264361 D 717231 CDS YP_004602507.1 336322540 10814533 265559..266248 1 NC_015672.1 PFAM: RNA pseudouridylate synthase; TIGRFAM: pseudouridine synthase, RluA family; KEGG: dap:Dacet_0352 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; pseudouridine synthase 266248 10814533 Flexsi_0247 Flexistipes sinusarabici DSM 4947 pseudouridine synthase YP_004602507.1 265559 D 717231 CDS YP_004602508.1 336322541 10814534 complement(266417..266713) 1 NC_015672.1 PFAM: Class III cytochrome C family; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR004559:IPR006638:IPR007197:IPR010723; KEGG: ddf:DEFDS_2032 oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM; HemN, C-terminal; SMART: Elongator protein 3/MiaB/NifB; SPTR: Oxygen-independent coproporphyrinogen III oxidase; TIGRFAM: Putative oxygen-independent coproporphyrinogen III oxidase; hypothetical protein 266713 10814534 Flexsi_0248 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602508.1 266417 R 717231 CDS YP_004602509.1 336322542 10814535 complement(266707..267795) 1 NC_015672.1 PFAM: Radical SAM superfamily; HemN C-terminal region; TIGRFAM: putative oxygen-independent coproporphyrinogen III oxidase; COGs: COG1132 ABC-type multidrug transport system ATPase and permease components; InterPro IPR003593:IPR001140:IPR003439; KEGG: ddf:DEFDS_0328 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; ABC transporter, transmembrane region; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; oxygen-independent coproporphyrinogen III oxidase 267795 10814535 Flexsi_0249 Flexistipes sinusarabici DSM 4947 oxygen-independent coproporphyrinogen III oxidase YP_004602509.1 266707 R 717231 CDS YP_004602510.1 336322543 10814536 267842..269572 1 NC_015672.1 PFAM: ABC transporter; ABC transporter transmembrane region; TIGRFAM: lipid A export permease/ATP-binding protein MsbA; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0329 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; xenobiotic-transporting ATPase 269572 10814536 Flexsi_0250 Flexistipes sinusarabici DSM 4947 xenobiotic-transporting ATPase YP_004602510.1 267842 D 717231 CDS YP_004602511.1 336322544 10814537 269569..270645 1 NC_015672.1 PFAM: Glycosyl transferases group 1; KEGG: fph:Fphi_1263 hypothetical protein; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase 270645 10814537 Flexsi_0251 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602511.1 269569 D 717231 CDS YP_004602512.1 336322545 10814538 complement(270662..271351) 1 NC_015672.1 PFAM: RmlD substrate binding domain; InterPro IPR001173; KEGG: sus:Acid_5170 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; hypothetical protein 271351 10814538 Flexsi_0252 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602512.1 270662 R 717231 CDS YP_004602513.1 336322546 10814539 271656..272435 1 NC_015672.1 PFAM: Glycosyl transferase family 2; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: cpb:Cphamn1_1914 glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; family 2 glycosyl transferase 272435 10814539 Flexsi_0253 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004602513.1 271656 D 717231 CDS YP_004602514.1 336322547 10814540 272432..273316 1 NC_015672.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; manually curated; glucose-1-phosphate thymidylyltransferase 273316 10814540 Flexsi_0254 Flexistipes sinusarabici DSM 4947 glucose-1-phosphate thymidylyltransferase YP_004602514.1 272432 D 717231 CDS YP_004602515.1 336322548 10814542 273533..274282 1 NC_015672.1 PFAM: Methyltransferase domain; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0336 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; type 12 methyltransferase 274282 10814542 Flexsi_0256 Flexistipes sinusarabici DSM 4947 type 12 methyltransferase YP_004602515.1 273533 D 717231 CDS YP_004602516.1 336322549 10814543 274279..275382 1 NC_015672.1 PFAM: Glycosyl transferases group 1; InterPro IPR007016; KEGG: dvm:DvMF_3018 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; group 1 glycosyl transferase 275382 10814543 Flexsi_0257 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602516.1 274279 D 717231 CDS YP_004602517.1 336322550 10814544 275363..276568 1 NC_015672.1 PFAM: O-Antigen ligase; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0337 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; O-antigen polymerase 276568 10814544 Flexsi_0258 Flexistipes sinusarabici DSM 4947 O-antigen polymerase YP_004602517.1 275363 D 717231 CDS YP_004602518.1 336322551 10814545 276546..277634 1 NC_015672.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: dap:Dacet_1893 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; group 1 glycosyl transferase 277634 10814545 Flexsi_0259 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602518.1 276546 D 717231 CDS YP_004602519.1 336322552 10814546 277631..278755 1 NC_015672.1 PFAM: Glycosyl transferases group 1; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0338 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 278755 10814546 Flexsi_0260 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602519.1 277631 D 717231 CDS YP_004602520.1 336322553 10814547 278752..279831 1 NC_015672.1 PFAM: Glycosyl transferases group 1; manually curated; group 1 glycosyl transferase 279831 10814547 Flexsi_0261 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602520.1 278752 D 717231 CDS YP_004602521.1 336322554 10814549 complement(281671..282282) 1 NC_015672.1 COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: ddf:DEFDS_0333 ADP-heptose:LPS heptosyltransferase II; PFAM: Glycosyl transferase, family 9; SPTR: ADP-heptose:LPS heptosyltransferase II; hypothetical protein 282282 10814549 Flexsi_0263 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602521.1 281671 R 717231 CDS YP_004602522.1 336322555 10814550 complement(282279..283286) 1 NC_015672.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); KEGG: ddf:DEFDS_0981 hypothetical protein; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 283286 10814550 Flexsi_0264 Flexistipes sinusarabici DSM 4947 glycosyl transferase family protein YP_004602522.1 282279 R 717231 CDS YP_004602523.1 336322556 10814551 283430..284044 1 NC_015672.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: ddf:DEFDS_0982 hypothetical protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Putative uncharacterized protein; hypothetical protein 284044 10814551 Flexsi_0265 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602523.1 283430 D 717231 CDS YP_004602524.1 336322557 10814552 284041..285564 1 NC_015672.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: pca:Pcar_1271 glycosyltransferase; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase; integral membrane sensor signal transduction histidine kinase 285564 10814552 Flexsi_0266 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004602524.1 284041 D 717231 CDS YP_004602525.1 336322558 10814553 285695..286411 1 NC_015672.1 PFAM: Glycosyl transferase family 2; COGs: COG3952 membrane protein; InterPro IPR011499; KEGG: ddf:DEFDS_0984 lipid A biosynthesis domain protein; PFAM: Lipid A biosynthesis, N-terminal; SPTR: Lipid A biosynthesis domain protein; family 2 glycosyl transferase 286411 10814553 Flexsi_0267 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004602525.1 285695 D 717231 CDS YP_004602526.1 336322559 10814554 286404..286691 1 NC_015672.1 PFAM: Lipid A Biosynthesis N-terminal domain; COGs: COG1807 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferase of PMT family; InterPro IPR003342; KEGG: ddf:DEFDS_0985 hypothetical protein; PFAM: Glycosyl transferase, family 39; SPTR: Putative uncharacterized protein; lipid A biosynthesis domain-containing protein 286691 10814554 Flexsi_0268 Flexistipes sinusarabici DSM 4947 lipid A biosynthesis domain-containing protein YP_004602526.1 286404 D 717231 CDS YP_004602527.1 336322560 10814555 286678..288294 1 NC_015672.1 PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase; COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: gem:GM21_1846 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; glycosyl transferase family protein 288294 10814555 Flexsi_0269 Flexistipes sinusarabici DSM 4947 glycosyl transferase family protein YP_004602527.1 286678 D 717231 CDS YP_004602528.1 336322561 10814556 288291..288809 1 NC_015672.1 PFAM: Nitroreductase family; InterPro IPR000524; KEGG: ddf:DEFDS_0767 hypothetical protein; PFAM: HTH transcriptional regulator, GntR; SPTR: Putative uncharacterized protein; nitroreductase 288809 10814556 Flexsi_0270 Flexistipes sinusarabici DSM 4947 nitroreductase YP_004602528.1 288291 D 717231 CDS YP_004602529.1 336322562 10814557 289394..290311 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; COGs: COG0145 N-methylhydantoinase A/acetone carboxylase beta subunit; InterPro IPR008040:IPR002821; KEGG: dsa:Desal_3220 5-oxoprolinase (ATP-hydrolyzing); PFAM: Hydantoinase/oxoprolinase; Hydantoinaseoxoprolinase, N-terminal; PRIAM: 5-oxoprolinase (ATP-hydrolyzing); SPTR: 5-oxoprolinase (ATP-hydrolyzing); regulatory protein GntR 290311 10814557 Flexsi_0271 Flexistipes sinusarabici DSM 4947 regulatory protein GntR YP_004602529.1 289394 D 717231 CDS YP_004602530.1 336322563 10814558 290329..292308 1 NC_015672.1 PFAM: Hydantoinase/oxoprolinase; Hydantoinase/oxoprolinase N-terminal region; COGs: COG0146 N-methylhydantoinase B/acetone carboxylase alpha subunit; InterPro IPR003692; KEGG: ddf:DEFDS_0769 N-methylhydantoinase B; PFAM: Hydantoinase B/oxoprolinase; PRIAM: 5-oxoprolinase (ATP-hydrolyzing); SPTR: N-methylhydantoinase B; 5-oxoprolinase 292308 10814558 Flexsi_0272 Flexistipes sinusarabici DSM 4947 5-oxoprolinase YP_004602530.1 290329 D 717231 CDS YP_004602531.1 336322564 10814559 292308..293879 1 NC_015672.1 PFAM: Hydantoinase B/oxoprolinase; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389; KEGG: dat:HRM2_46640 TRAP-type C4-dicarboxylate transport system periplasmic component; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP-type C4-dicarboxylate transport system periplasmic component; 5-oxoprolinase 293879 10814559 Flexsi_0273 Flexistipes sinusarabici DSM 4947 5-oxoprolinase YP_004602531.1 292308 D 717231 CDS YP_004602532.1 336322565 10814560 293912..294883 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0771 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; family 7 extracellular solute-binding protein 294883 10814560 Flexsi_0274 Flexistipes sinusarabici DSM 4947 family 7 extracellular solute-binding protein YP_004602532.1 293912 D 717231 CDS YP_004602533.1 336322566 10814561 294880..295380 1 NC_015672.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR004681:IPR010656; KEGG: dat:HRM2_46660 putative TRAP C4-dicarboxylate transport system permease DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: Putative TRAP C4-dicarboxylate transport system permease DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 295380 10814561 Flexsi_0275 Flexistipes sinusarabici DSM 4947 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004602533.1 294880 D 717231 CDS YP_004602534.1 336322567 10814562 295355..296719 1 NC_015672.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003660:IPR003661:IPR003594; KEGG: cni:Calni_0451 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Integral membrane sensor signal transduction histidine kinase; TRAP dicarboxylate transporter subunit DctM 296719 10814562 Flexsi_0276 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctM YP_004602534.1 295355 D 717231 CDS YP_004602535.1 336322568 10814563 complement(296691..298229) 1 NC_015672.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cni:Calni_0450 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; integral membrane sensor signal transduction histidine kinase 298229 10814563 Flexsi_0277 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004602535.1 296691 R 717231 CDS YP_004602536.1 336322569 10814564 complement(298226..298921) 1 NC_015672.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG0348 Polyferredoxin; KEGG: cni:Calni_1875 ferredoxin-type protein, NapH/maun family; SPTR: Ferredoxin-type protein, NapH/MauN family; winged helix family two component transcriptional regulator 298921 10814564 Flexsi_0278 Flexistipes sinusarabici DSM 4947 winged helix family two component transcriptional regulator YP_004602536.1 298226 R 717231 CDS YP_004602537.1 336322570 10814565 complement(298952..299755) 1 NC_015672.1 TIGRFAM: ferredoxin-type protein, NapH/MauN family; InterPro IPR001450; KEGG: ddf:DEFDS_1822 periplasmic nitrate reductase NapG; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Periplasmic nitrate reductase NapG; ferredoxin-type protein, NapH/maun family 299755 10814565 Flexsi_0279 Flexistipes sinusarabici DSM 4947 ferredoxin-type protein, NapH/maun family YP_004602537.1 298952 R 717231 CDS YP_004602538.1 336322571 10814566 complement(300567..301322) 1 NC_015672.1 TIGRFAM: MauM/NapG family ferredoxin-type protein; KEGG: cni:Calni_1873 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin 301322 10814566 Flexsi_0280 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004602538.1 300567 R 717231 CDS YP_004602539.1 336322572 10814567 complement(301319..301630) 1 NC_015672.1 PFAM: NapD protein; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR006311:IPR019546:IPR006963:IPR006656:IPR 006657; KEGG: ddf:DEFDS_1820 periplasmic nitrate reductase NapA; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Periplasmic nitrate reductase NapA; hypothetical protein 301630 10814567 Flexsi_0281 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602539.1 301319 R 717231 CDS YP_004602540.1 336322573 10814568 complement(301688..304081) 1 NC_015672.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; KEGG: dap:Dacet_0085 hypothetical protein; SPTR: Putative uncharacterized protein; nitrate reductase 304081 10814568 Flexsi_0282 Flexistipes sinusarabici DSM 4947 nitrate reductase YP_004602540.1 301688 R 717231 CDS YP_004602541.1 336322574 10814569 complement(304110..304505) 1 NC_015672.1 KEGG: ddf:DEFDS_1818 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 304505 10814569 Flexsi_0283 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602541.1 304110 R 717231 CDS YP_004602542.1 336322575 10814570 304697..306298 1 NC_015672.1 KEGG: ddf:DEFDS_1817 hypothetical protein; SPTR: Putative uncharacterized protein; multiheme C-type cytochrome 306298 10814570 Flexsi_0284 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004602542.1 304697 D 717231 CDS YP_004602543.1 336322576 10814571 306410..306925 1 NC_015672.1 COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR006055:IPR013520; KEGG: ddf:DEFDS_0125 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; hypothetical protein 306925 10814571 Flexsi_0285 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602543.1 306410 D 717231 CDS YP_004602544.1 336322577 10814572 complement(307078..307704) 1 NC_015672.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG1691 NCAIR mutase (PurE)-related protein; InterPro IPR018658:IPR000031; KEGG: ddf:DEFDS_0021 hypothetical protein; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; Protein of unknown function DUF2089; SPTR: Putative uncharacterized protein; DNA polymerase III subunit epsilon 307704 10814572 Flexsi_0286 Flexistipes sinusarabici DSM 4947 DNA polymerase III subunit epsilon YP_004602544.1 307078 R 717231 CDS YP_004602545.1 336322578 10814573 complement(308028..308783) 1 NC_015672.1 PFAM: AIR carboxylase; COGs: COG0293 23S rRNA methylase; HAMAP: Ribosomal RNA large subunit methyltransferase E; InterPro IPR002877; KEGG: ddf:DEFDS_0022 cell division protein methyltransferase FtsJ; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; SPTR: Cell division protein methyltransferase FtsJ; 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase 308783 10814573 Flexsi_0287 Flexistipes sinusarabici DSM 4947 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase YP_004602545.1 308028 R 717231 CDS YP_004602546.1 336322579 10814574 complement(308773..309366) 1 NC_015672.1 PFAM: FtsJ-like methyltransferase; TIGRFAM: cell division protein FtsJ; COGs: COG1530 Ribonuclease G and E; InterPro IPR004659:IPR003029:IPR019307; KEGG: cni:Calni_1377 RNase G; PFAM: RNA-binding protein AU-1/Ribonuclease E/G; Ribosomal protein S1, RNA binding domain; SPTR: RNAse G; TIGRFAM: Ribonuclease E/G; ribosomal RNA large subunit methyltransferase E 309366 10814574 Flexsi_0288 Flexistipes sinusarabici DSM 4947 ribosomal RNA large subunit methyltransferase E YP_004602546.1 308773 R 717231 CDS YP_004602547.1 336322580 10814575 complement(309366..310901) 1 NC_015672.1 PFAM: Ribonuclease E/G family; S1 RNA binding domain; TIGRFAM: ribonuclease, Rne/Rng family; KEGG: ddf:DEFDS_0024 mutual gliding protein A; SPTR: Mutual gliding protein A; ribonuclease, Rne/Rng family 310901 10814575 Flexsi_0289 Flexistipes sinusarabici DSM 4947 ribonuclease, Rne/Rng family YP_004602547.1 309366 R 717231 CDS YP_004602548.1 336322581 10814576 complement(310905..311486) 1 NC_015672.1 PFAM: ADP-ribosylation factor family; InterPro IPR004942; KEGG: cni:Calni_1375 roadblock/lc7 family protein; PFAM: Dynein light chain-related; SPTR: Roadblock/LC7 family protein; mutual gliding protein A 311486 10814576 Flexsi_0290 Flexistipes sinusarabici DSM 4947 mutual gliding protein A YP_004602548.1 310905 R 717231 CDS YP_004602549.1 336322582 10814577 complement(311498..311992) 1 NC_015672.1 PFAM: Roadblock/LC7 domain; COGs: COG0353 Recombinational DNA repair protein (RecF pathway); HAMAP: Recombination protein recR; InterPro IPR000093:IPR006154:IPR015967:IPR006171; KEGG: cni:Calni_1374 DNA replication and repair protein RecR; PFAM: Toprim domain; Zinc finger C4-type, RecR; SMART: Toprim domain, subgroup; SPTR: DNA replication and repair protein RecR; TIGRFAM: RecR protein; Roadblock/LC7 family protein 311992 10814577 Flexsi_0291 Flexistipes sinusarabici DSM 4947 Roadblock/LC7 family protein YP_004602549.1 311498 R 717231 CDS YP_004602550.1 336322583 10814578 complement(312113..312712) 1 NC_015672.1 PFAM: Toprim domain; RecR protein; TIGRFAM: recombination protein RecR; COGs: COG0718 conserved hypothetical protein; HAMAP: Uncharacterised protein family UPF0133; InterPro IPR004401; KEGG: ddf:DEFDS_0142 hypothetical protein; PFAM: Uncharacterised protein family UPF0133; SPTR: UPF0133 protein DEFDS_0142; TIGRFAM: Uncharacterised protein family UPF0133; Recombination protein recR 312712 10814578 Flexsi_0292 Flexistipes sinusarabici DSM 4947 Recombination protein recR YP_004602550.1 312113 R 717231 CDS YP_004602551.1 336322584 10814579 complement(312716..313030) 1 NC_015672.1 PFAM: Uncharacterised BCR, YbaB family COG0718; TIGRFAM: DNA-binding protein, YbaB/EbfC family; COGs: COG2812 DNA polymerase III gamma/tau subunits; InterPro IPR012763:IPR003593:IPR003959; KEGG: ddf:DEFDS_0141 DNA polymerase III gamma/tau subunits; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: DNA polymerase III, gamma/tau subunits; TIGRFAM: DNA polymerase III, subunit gamma/ tau; hypothetical protein 313030 10814579 Flexsi_0293 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602551.1 312716 R 717231 CDS YP_004602552.1 336322585 10814580 complement(313135..314739) 1 NC_015672.1 PFAM: ATPase family associated with various cellular activities (AAA); DNA polymerase III subunits gamma and tau domain III; TIGRFAM: DNA polymerase III, subunit gamma and tau; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; DNA polymerase III subunits gamma and tau 314739 10814580 Flexsi_0294 Flexistipes sinusarabici DSM 4947 DNA polymerase III subunits gamma and tau YP_004602552.1 313135 R 717231 CDS YP_004602553.1 336322586 10814581 complement(314983..316302) 1 NC_015672.1 PFAM: Transposase DDE domain; transposase IS4 family protein 316302 10814581 Flexsi_0295 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602553.1 314983 R 717231 CDS YP_004602554.1 336322587 10814582 316635..316856 1 NC_015672.1 KEGG: cni:Calni_1818 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 316856 10814582 Flexsi_0296 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602554.1 316635 D 717231 CDS YP_004602555.1 336322588 10814583 317414..317575 1 NC_015672.1 COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001320:IPR001638; KEGG: cni:Calni_1817 amino acid abc transporter substrate-binding protein, paat family; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Amino acid ABC transporter substrate-binding protein, PAAT family; hypothetical protein 317575 10814583 Flexsi_0297 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602555.1 317414 D 717231 CDS YP_004602556.1 336322589 10814584 317597..318406 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: ddf:DEFDS_2027 amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Amino acid ABC transporter, permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ABC transporter periplasmic subunit 318406 10814584 Flexsi_0298 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic subunit YP_004602556.1 317597 D 717231 CDS YP_004602557.1 336322590 10814585 318426..319370 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_2026 amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid ABC transporter, ATP-binding protein; polar amino acid ABC transporter inner membrane subunit 319370 10814585 Flexsi_0299 Flexistipes sinusarabici DSM 4947 polar amino acid ABC transporter inner membrane subunit YP_004602557.1 318426 D 717231 CDS YP_004602558.1 336322591 10814586 319363..320106 1 NC_015672.1 PFAM: ABC transporter; InterPro IPR001041; KEGG: ddf:DEFDS_2025 hypothetical protein; PFAM: Ferredoxin; SPTR: Putative uncharacterized protein; phosphonate-transporting ATPase 320106 10814586 Flexsi_0300 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004602558.1 319363 D 717231 CDS YP_004602559.1 336322592 10814587 320108..321760 1 NC_015672.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: ddf:DEFDS_0145 two-component response regulator; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Two-component response regulator; ferredoxin 321760 10814587 Flexsi_0301 Flexistipes sinusarabici DSM 4947 ferredoxin YP_004602559.1 320108 D 717231 CDS YP_004602560.1 336322593 10814588 complement(321750..322124) 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR005001:IPR001163; KEGG: ddf:DEFDS_0146 small nuclear ribonucleoprotein; PFAM: Like-Sm ribonucleoprotein, core; SPTR: Small nuclear ribonucleoprotein; TIGRFAM: Host factor Hfq; response regulator receiver protein 322124 10814588 Flexsi_0302 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004602560.1 321750 R 717231 CDS YP_004602561.1 336322594 10814589 complement(322130..322633) 1 NC_015672.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; RNA chaperone Hfq 322633 10814589 Flexsi_0303 Flexistipes sinusarabici DSM 4947 RNA chaperone Hfq YP_004602561.1 322130 R 717231 CDS YP_004602562.1 336322595 10814590 complement(322718..323983) 1 NC_015672.1 transposase IS4 family protein 323983 10814590 Flexsi_0304 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602562.1 322718 R 717231 CDS YP_004602563.1 336322596 10814592 324718..325029 1 NC_015672.1 PFAM: Nucleotidyltransferase domain; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: chy:CHY_2535 hypothetical protein; PFAM: Protein of unknown function DUF86; SPTR: Putative toxin-antitoxin system, antitoxin component; DNA polymerase beta domain-containing protein 325029 10814592 Flexsi_0305 Flexistipes sinusarabici DSM 4947 DNA polymerase beta domain-containing protein YP_004602563.1 324718 D 717231 CDS YP_004602564.1 336322597 10814593 325022..325369 1 NC_015672.1 PFAM: Protein of unknown function DUF86; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR003593:IPR002078:IPR002197; KEGG: vvu:VV2_0683 transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Helix-turn-helix, Fis-type; SMART: ATPase, AAA+ type, core; SPTR: Transcriptional regulator; hypothetical protein 325369 10814593 Flexsi_0306 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602564.1 325022 D 717231 CDS YP_004602565.1 336322598 10814594 325634..326584 1 NC_015672.1 PFAM: Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0471 Di- and tricarboxylate transporter; InterPro IPR004680:IPR006037; KEGG: glo:Glov_1530 TrkA-C domain protein; PFAM: Regulator of K+ conductance, C-terminal; Divalent ion symporter; SPTR: TrkA-C domain protein; Fis family sigma-54 specific transcriptional regulator 326584 10814594 Flexsi_0307 Flexistipes sinusarabici DSM 4947 Fis family sigma-54 specific transcriptional regulator YP_004602565.1 325634 D 717231 CDS YP_004602566.1 336322599 10814595 326581..328353 1 NC_015672.1 PFAM: Citrate transporter; TrkA-C domain; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006240:IPR000760; KEGG: nwa:Nwat_0721 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; TrkA-C domain-containing protein 328353 10814595 Flexsi_0308 Flexistipes sinusarabici DSM 4947 TrkA-C domain-containing protein YP_004602566.1 326581 D 717231 CDS YP_004602567.1 336322600 10814596 328355..329194 1 NC_015672.1 PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; HAMAP: Sulfate adenylyltransferase subunit 2; InterPro IPR011784:IPR002500; KEGG: mca:MCA2629 sulfate adenylyltransferase subunit 2; PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Sulfate adenylyltransferase; SPTR: Sulfate adenylyltransferase subunit 2; TIGRFAM: Sulphate adenylyltransferase, small subunit; 3'(2'),5'-bisphosphate nucleotidase 329194 10814596 Flexsi_0309 Flexistipes sinusarabici DSM 4947 3'(2'),5'-bisphosphate nucleotidase YP_004602567.1 328355 D 717231 CDS YP_004602568.1 336322601 10814597 329482..330393 1 NC_015672.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: sulfate adenylyltransferase, small subunit; InterPro IPR008815; KEGG: sun:SUN_0718 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; sulfate adenylyltransferase 330393 10814597 Flexsi_0310 Flexistipes sinusarabici DSM 4947 sulfate adenylyltransferase YP_004602568.1 329482 D 717231 CDS YP_004602569.1 336322602 10814598 330439..330702 1 NC_015672.1 PFAM: S23 ribosomal protein; COGs: COG2895 GTPase - Sulfate adenylate transferase subunit 1; HAMAP: Sulfate adenylyltransferase subunit 1; InterPro IPR011779:IPR002891:IPR000795; KEGG: aeh:Mlg_2345 sulfate adenylyltransferase subunit 1 / adenylylsulfate kinase; PFAM: Adenylylsulphate kinase, C-terminal; Protein synthesis factor, GTP-binding; PRIAM: Sulfate adenylyltransferase., Adenylyl-sulfate kinase; SPTR: Adenylylsulfate kinase; TIGRFAM: Sulphate adenylyltransferase, large subunit; Adenylylsulphate kinase, C-terminal; S23 ribosomal protein 330702 10814598 Flexsi_0311 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004602569.1 330439 D 717231 CDS YP_004602570.1 336322603 10814599 330816..332759 1 NC_015672.1 PFAM: Elongation factor Tu GTP binding domain; Adenylylsulphate kinase; TIGRFAM: adenylylsulfate kinase (apsK); sulfate adenylyltransferase, large subunit; small GTP-binding protein domain; InterPro IPR001584; KEGG: ppd:Ppro_1841 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase, catalytic region; sulfate adenylyltransferase 332759 10814599 Flexsi_0312 Flexistipes sinusarabici DSM 4947 sulfate adenylyltransferase YP_004602570.1 330816 D 717231 CDS YP_004602571.1 336322604 10814600 complement(332891..333820) 1 NC_015672.1 PFAM: Integrase core domain; InterPro IPR002514; KEGG: kol:Kole_0767 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911; SPTR: Putative uncharacterized protein; integrase catalytic subunit 333820 10814600 Flexsi_0313 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004602571.1 332891 R 717231 CDS YP_004602572.1 336322605 10814601 complement(333877..334185) 1 NC_015672.1 PFAM: Transposase; COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: tba:TERMP_00544 putative nucleotidyltransferase; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein; transposase IS3/IS911 family protein 334185 10814601 Flexsi_0314 Flexistipes sinusarabici DSM 4947 transposase IS3/IS911 family protein YP_004602572.1 333877 R 717231 CDS YP_004602573.1 336322606 10814602 334442..334756 1 NC_015672.1 PFAM: Nucleotidyltransferase domain; COGs: COG2361 conserved hypothetical protein; InterPro IPR008201; KEGG: kol:Kole_0232 protein of unknown function DUF86; PFAM: Protein of unknown function DUF86; SPTR: Putative uncharacterized protein; DNA polymerase beta domain-containing protein 334756 10814602 Flexsi_0315 Flexistipes sinusarabici DSM 4947 DNA polymerase beta domain-containing protein YP_004602573.1 334442 D 717231 CDS YP_004602574.1 336322607 10814603 334749..334970 1 NC_015672.1 PFAM: Protein of unknown function DUF86; KEGG: ere:EUBREC_0492 hypothetical protein; hypothetical protein 334970 10814603 Flexsi_0316 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602574.1 334749 D 717231 CDS YP_004602575.1 336322608 10814604 335411..335749 1 NC_015672.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 335749 10814604 Flexsi_0317 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602575.1 335411 D 717231 CDS YP_004602576.1 336322609 10814605 complement(335781..337616) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: bpf:BpOF4_18990 putative major facilitator superfamily protein; PFAM: Major facilitator superfamily MFS-1; SPTR: Putative major facilitator superfamily protein; transposase IS4 family protein 337616 10814605 Flexsi_0318 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602576.1 335781 R 717231 CDS YP_004602577.1 336322610 10814606 complement(337817..338905) 1 NC_015672.1 PFAM: Major Facilitator Superfamily; COGs: COG1814 Uncharacterized membrane protein; InterPro IPR003251:IPR008217; KEGG: pmo:Pmob_0860 hypothetical protein; PFAM: Protein of unknown function DUF125, transmembrane; Rubrerythrin; SPTR: Putative uncharacterized protein; major facilitator superfamily protein 338905 10814606 Flexsi_0319 Flexistipes sinusarabici DSM 4947 major facilitator superfamily protein YP_004602577.1 337817 R 717231 CDS YP_004602578.1 336322611 10814607 339316..340197 1 NC_015672.1 PFAM: VIT family; Rubrerythrin; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000644; KEGG: ddf:DEFDS_1443 signal transduction protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Signal transduction protein; hypothetical protein 340197 10814607 Flexsi_0320 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602578.1 339316 D 717231 CDS YP_004602579.1 336322612 10814608 complement(340215..340655) 1 NC_015672.1 PFAM: CBS domain; InterPro IPR013096; KEGG: ddf:DEFDS_1702 hypothetical protein; PFAM: Cupin 2, conserved barrel; SPTR: Putative uncharacterized protein; putative signal transduction protein with CBS domains 340655 10814608 Flexsi_0321 Flexistipes sinusarabici DSM 4947 putative signal transduction protein with CBS domains YP_004602579.1 340215 R 717231 CDS YP_004602580.1 336322613 10814609 complement(340652..341017) 1 NC_015672.1 PFAM: Cupin domain; InterPro IPR011701; KEGG: MFS general substrate transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; cupin 341017 10814609 Flexsi_0322 Flexistipes sinusarabici DSM 4947 cupin YP_004602580.1 340652 R 717231 CDS YP_004602581.1 336322614 10814610 341119..342318 1 NC_015672.1 PFAM: Major Facilitator Superfamily; COGs: COG1942 Uncharacterized protein 4-oxalocrotonate tautomerase homolog; InterPro IPR018191:IPR004370; KEGG: dze:Dd1591_4074 4-oxalocrotonate tautomerase family enzyme; PFAM: 4-oxalocrotonate tautomerase; SPTR: 4-oxalocrotonate tautomerase family enzyme; TIGRFAM: 4-oxalocrotonate tautomerase, subgroup; major facilitator superfamily protein 342318 10814610 Flexsi_0323 Flexistipes sinusarabici DSM 4947 major facilitator superfamily protein YP_004602581.1 341119 D 717231 CDS YP_004602582.1 336322615 10814611 342299..342499 1 NC_015672.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; COGs: COG1720 conserved hypothetical protein; InterPro IPR001378; KEGG: tye:THEYE_A1086 hypothetical protein; PFAM: Uncharacterised protein family UPF0066; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0066; 4-oxalocrotonate tautomerase 342499 10814611 Flexsi_0324 Flexistipes sinusarabici DSM 4947 4-oxalocrotonate tautomerase YP_004602582.1 342299 D 717231 CDS YP_004602583.1 336322616 10814612 complement(342505..342903) 1 NC_015672.1 PFAM: Uncharacterised protein family UPF0066; TIGRFAM: putative methyltransferase, YaeB/AF_0241 family; InterPro IPR001845; KEGG: ddf:DEFDS_0052 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; hypothetical protein 342903 10814612 Flexsi_0325 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602583.1 342505 R 717231 CDS YP_004602584.1 336322617 10814613 343704..343967 1 NC_015672.1 PFAM: Bacterial regulatory protein, arsR family; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_0053 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; regulatory protein ArsR 343967 10814613 Flexsi_0326 Flexistipes sinusarabici DSM 4947 regulatory protein ArsR YP_004602584.1 343704 D 717231 CDS YP_004602585.1 336322618 10814614 343967..345271 1 NC_015672.1 PFAM: Outer membrane efflux protein; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_0054 acriflavin resistance protein, AcrA/AcrE family; PFAM: Secretion protein HlyD; SPTR: Acriflavin resistance protein, AcrA/AcrE family; TIGRFAM: Secretion protein HlyD; outer membrane efflux protein 345271 10814614 Flexsi_0327 Flexistipes sinusarabici DSM 4947 outer membrane efflux protein YP_004602585.1 343967 D 717231 CDS YP_004602586.1 336322619 10814615 345291..346478 1 NC_015672.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: ddf:DEFDS_0055 acriflavin resistance protein, AcrB/AcrD/AcrF family; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein, AcrB/AcrD/AcrF family; RND family efflux transporter MFP subunit 346478 10814615 Flexsi_0328 Flexistipes sinusarabici DSM 4947 RND family efflux transporter MFP subunit YP_004602586.1 345291 D 717231 CDS YP_004602587.1 336322620 10814616 346479..349754 1 NC_015672.1 PFAM: AcrB/AcrD/AcrF family; KEGG: ddf:DEFDS_0056 hypothetical protein; SPTR: Putative uncharacterized protein; acriflavin resistance protein 349754 10814616 Flexsi_0329 Flexistipes sinusarabici DSM 4947 acriflavin resistance protein YP_004602587.1 346479 D 717231 CDS YP_004602588.1 336322621 10814617 349771..349962 1 NC_015672.1 PFAM: Protein of unknown function (DUF2892); InterPro IPR011701; KEGG: dap:Dacet_2401 major facilitator superfamily MFS_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; hypothetical protein 349962 10814617 Flexsi_0330 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602588.1 349771 D 717231 CDS YP_004602589.1 336322622 10814618 350267..351421 1 NC_015672.1 PFAM: Major Facilitator Superfamily; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ddf:DEFDS_1609 hypothetical protein; PFAM: Patatin; SPTR: Putative uncharacterized protein; major facilitator superfamily protein 351421 10814618 Flexsi_0331 Flexistipes sinusarabici DSM 4947 major facilitator superfamily protein YP_004602589.1 350267 D 717231 CDS YP_004602590.1 336322623 10814619 complement(351506..352273) 1 NC_015672.1 PFAM: Patatin-like phospholipase; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ddf:DEFDS_1608 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; patatin 352273 10814619 Flexsi_0332 Flexistipes sinusarabici DSM 4947 patatin YP_004602590.1 351506 R 717231 CDS YP_004602591.1 336322624 10814620 352850..353521 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ddf:DEFDS_1607 transcriptional regulator, GntR family; PFAM: GntR, C-terminal; HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; GntR family transcriptional regulator 353521 10814620 Flexsi_0333 Flexistipes sinusarabici DSM 4947 GntR family transcriptional regulator YP_004602591.1 352850 D 717231 CDS YP_004602592.1 336322625 10814621 353524..354189 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1828 Phosphoribosylformylglycinamidine (FGAM) synthase PurS component; InterPro IPR003850; KEGG: ddf:DEFDS_1606 phosphoribosylformylglycinamidine synthase small subunit; PFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; SPTR: Phosphoribosylformylglycinamidine synthase, small subunit; TIGRFAM: Phosphoribosylformylglycinamidine synthetase, PurS subunit; GntR family transcriptional regulator 354189 10814621 Flexsi_0334 Flexistipes sinusarabici DSM 4947 GntR family transcriptional regulator YP_004602592.1 353524 D 717231 CDS YP_004602593.1 336322626 10814622 354308..354541 1 NC_015672.1 PFAM: Phosphoribosylformylglycinamidine (FGAM) synthase; TIGRFAM: phosphoribosylformylglycinamidine synthase, purS protein; COGs: COG0047 Phosphoribosylformylglycinamidine (FGAM) synthase glutamine amidotransferase domain; HAMAP: Phosphoribosylformylglycinamidine synthase 1; InterPro IPR010075:IPR011698; KEGG: cni:Calni_1057 phosphoribosylformylglycinamidine synthase subunit I; PFAM: CobB/CobQ-like glutamine amidotransferase; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase subunit I; TIGRFAM: Phosphoribosylformylglycinamidine synthase I; phosphoribosylformylglycinamidine synthase PurS 354541 10814622 Flexsi_0335 Flexistipes sinusarabici DSM 4947 phosphoribosylformylglycinamidine synthase PurS YP_004602593.1 354308 D 717231 CDS YP_004602594.1 336322627 10814623 354561..355256 1 NC_015672.1 PFAM: CobB/CobQ-like glutamine amidotransferase domain; TIGRFAM: phosphoribosylformylglycinamidine synthase I; COGs: COG0046 Phosphoribosylformylglycinamidine (FGAM) synthase synthetase domain; HAMAP: Phosphoribosylformylglycinamidine synthase 2; InterPro IPR010074:IPR000728:IPR010918; KEGG: cni:Calni_1056 phosphoribosylformylglycinamidine synthase subunit II; PFAM: AIR synthase related protein, C-terminal; AIR synthase related protein; PRIAM: Phosphoribosylformylglycinamidine synthase; SPTR: Phosphoribosylformylglycinamidine synthase 2; TIGRFAM: Phosphoribosylformylglycinamidine synthase II; phosphoribosylformylglycinamidine synthase 1 355256 10814623 Flexsi_0336 Flexistipes sinusarabici DSM 4947 phosphoribosylformylglycinamidine synthase 1 YP_004602594.1 354561 D 717231 CDS YP_004602595.1 336322628 10814624 355257..357488 1 NC_015672.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: phosphoribosylformylglycinamidine synthase II; COGs: COG0034 Glutamine phosphoribosylpyrophosphate amidotransferase; InterPro IPR005854:IPR000583:IPR000836; KEGG: ddf:DEFDS_1603 amidophosphoribosyltransferase; PFAM: Glutamine amidotransferase, class-II; Phosphoribosyltransferase; PRIAM: Amidophosphoribosyltransferase; SPTR: Amidophosphoribosyltransferase; TIGRFAM: Amidophosphoribosyl transferase; phosphoribosylformylglycinamidine synthase 2 357488 10814624 Flexsi_0337 Flexistipes sinusarabici DSM 4947 phosphoribosylformylglycinamidine synthase 2 YP_004602595.1 355257 D 717231 CDS YP_004602596.1 336322629 10814625 357485..358876 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; Glutamine amidotransferases class-II; TIGRFAM: amidophosphoribosyltransferase; KEGG: cni:Calni_1054 hypothetical protein; SPTR: Putative uncharacterized protein; amidophosphoribosyltransferase 358876 10814625 Flexsi_0338 Flexistipes sinusarabici DSM 4947 amidophosphoribosyltransferase YP_004602596.1 357485 D 717231 CDS YP_004602597.1 336322630 10814626 359014..359220 1 NC_015672.1 COGs: COG4122 O-methyltransferase; InterPro IPR002935; KEGG: ddf:DEFDS_0528 caffeoyl-CoA O-methyltransferase; PFAM: O-methyltransferase, family 3; SPTR: Caffeoyl-CoA O-methyltransferase; hypothetical protein 359220 10814626 Flexsi_0339 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602597.1 359014 D 717231 CDS YP_004602598.1 336322631 10814627 359465..360097 1 NC_015672.1 PFAM: O-methyltransferase; COGs: COG0826 Collagenase and related protease; InterPro IPR001539; KEGG: cni:Calni_1780 peptidase U32; PFAM: Peptidase U32; SPTR: Peptidase U32; O-methyltransferase family protein 360097 10814627 Flexsi_0340 Flexistipes sinusarabici DSM 4947 O-methyltransferase family protein YP_004602598.1 359465 D 717231 CDS YP_004602599.1 336322632 10814628 360084..361286 1 NC_015672.1 PFAM: Peptidase family U32; COGs: COG0272 NAD-dependent DNA ligase (contains BRCT domain type II); HAMAP: DNA ligase; InterProIPR001679:IPR013839:IPR004150:IPR004149:IPR 001357:IPR013840:IPR003583; KEGG: ddf:DEFDS_0530 NAD-dependent DNA ligase; PFAM: NAD-dependent DNA ligase, adenylation; NAD-dependent DNA ligase, OB-fold; Zinc-finger, NAD-dependent DNA ligase C4-type; BRCT; PRIAM: DNA ligase (NAD(+)); SMART: NAD-dependent DNA ligase, N-terminal; Helix-hairpin-helix DNA-binding motif, class 1; BRCT; SPTR: DNA ligase; TIGRFAM: NAD-dependent DNA ligase; peptidase U32 361286 10814628 Flexsi_0341 Flexistipes sinusarabici DSM 4947 peptidase U32 YP_004602599.1 360084 D 717231 CDS YP_004602600.1 336322633 10814629 361283..363262 1 NC_015672.1 PFAM: NAD-dependent DNA ligase OB-fold domain; NAD-dependent DNA ligase adenylation domain; NAD-dependent DNA ligase C4 zinc finger domain; BRCA1 C Terminus (BRCT) domain; TIGRFAM: DNA ligase, NAD-dependent; COGs: COG1806 conserved hypothetical protein; HAMAP: Protein of unknown function DUF299, phosphotransferase, predicted; InterPro IPR005177; KEGG: cni:Calni_1778 hypothetical protein; PFAM: Protein of unknown function DUF299, phosphotransferase, predicted; SPTR: Putative phosphotransferase Calni_1778; DNA ligase 363262 10814629 Flexsi_0342 Flexistipes sinusarabici DSM 4947 DNA ligase YP_004602600.1 361283 D 717231 CDS YP_004602601.1 336322634 10814630 363262..364074 1 NC_015672.1 PFAM: Domain of unknown function (DUF299); InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; phosphotransferase ydiA 364074 10814630 Flexsi_0343 Flexistipes sinusarabici DSM 4947 phosphotransferase ydiA YP_004602601.1 363262 D 717231 CDS YP_004602602.1 336322635 10814631 364196..365515 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: sat:SYN_03116 hypothetical protein; SPTR: Hypothetical exported protein; transposase IS4 family protein 365515 10814631 Flexsi_0344 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602602.1 364196 D 717231 CDS YP_004602603.1 336322636 10814632 365947..367164 1 NC_015672.1 InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; hypothetical protein 367164 10814632 Flexsi_0345 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602603.1 365947 D 717231 CDS YP_004602604.1 336322637 10814633 367906..368679 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS116/IS110/IS902 family protein 368679 10814633 Flexsi_0346 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004602604.1 367906 D 717231 CDS YP_004602605.1 336322638 10814635 join(370755..371183,371183..371788) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG1922 Teichoic acid biosynthesis protein; InterPro IPR004629; KEGG: ppn:Palpr_2333 glycosyl transferase, WecB/TagA/CpsF family; PFAM: Glycosyl transferase WecB/TagA/CpsF; PRIAM: N-acetylglucosaminyldiphosphoundecaprenol N-acetyl-beta-D-mannosaminyltransferase; SPTR: Putative acetyltransferase/glucosyltransferase; TIGRFAM: Glycosyl transferase WecB/TagA/CpsF; transposase IS116/IS110/IS902 family protein 371788 10814635 Flexsi_0349 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004602605.1 370755 D 717231 CDS YP_004602606.1 336322639 10814636 complement(372204..372929) 1 NC_015672.1 PFAM: Glycosyl transferase WecB/TagA/CpsF family; TIGRFAM: bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family; InterPro IPR018831; KEGG: dal:Dalk_1594 hypothetical protein; PFAM: Protein of unknown function NKWYS; SPTR: Putative uncharacterized protein; WecB/TagA/CpsF family glycosyl transferase 372929 10814636 Flexsi_0350 Flexistipes sinusarabici DSM 4947 WecB/TagA/CpsF family glycosyl transferase YP_004602606.1 372204 R 717231 CDS YP_004602607.1 336322640 10814637 complement(372956..373837) 1 NC_015672.1 PFAM: Putative capsular polysaccharide synthesis protein; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ppn:Palpr_2332 glycosyl transferase group 1; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase group 1; hypothetical protein 373837 10814637 Flexsi_0351 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602607.1 372956 R 717231 CDS YP_004602608.1 336322641 10814638 complement(373853..374890) 1 NC_015672.1 PFAM: Glycosyl transferases group 1; KEGG: sli:Slin_6401 hypothetical protein; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase 374890 10814638 Flexsi_0352 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602608.1 373853 R 717231 CDS YP_004602609.1 336322642 10814639 complement(375042..376223) 1 NC_015672.1 InterPro IPR000863; KEGG: dae:Dtox_4099 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase; hypothetical protein 376223 10814639 Flexsi_0353 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602609.1 375042 R 717231 CDS YP_004602610.1 336322643 10814640 complement(376201..377061) 1 NC_015672.1 PFAM: Sulfotransferase domain; KEGG: eli:ELI_12210 hypothetical protein; SPTR: Putative uncharacterized protein; sulfotransferase 377061 10814640 Flexsi_0354 Flexistipes sinusarabici DSM 4947 sulfotransferase YP_004602610.1 376201 R 717231 CDS YP_004602611.1 336322644 10814641 complement(377087..377800) 1 NC_015672.1 COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: bse:Bsel_3040 glycosyl transferase family 2 protein; PFAM: Glycosyl transferase, family 2; SPTR: WfaY protein; hypothetical protein 377800 10814641 Flexsi_0355 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602611.1 377087 R 717231 CDS YP_004602612.1 336322645 10814642 complement(377906..378757) 1 NC_015672.1 PFAM: Glycosyl transferase family 2; COGs: COG2327 conserved hypothetical protein; KEGG: pca:Pcar_1801 hypothetical protein; SPTR: Putative uncharacterized protein; family 2 glycosyl transferase 378757 10814642 Flexsi_0356 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004602612.1 377906 R 717231 CDS YP_004602613.1 336322646 10814643 complement(378754..379872) 1 NC_015672.1 PFAM: Polysaccharide pyruvyl transferase; InterPro IPR000863; KEGG: syp:SYNPCC7002_A1506 hypothetical protein; PFAM: Sulfotransferase; SPTR: Putative uncharacterized protein; hypothetical protein 379872 10814643 Flexsi_0357 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602613.1 378754 R 717231 CDS YP_004602614.1 336322647 10814644 complement(379875..380615) 1 NC_015672.1 PFAM: Sulfotransferase domain; COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: dat:HRM2_25290 lipopolysaccharide biosynthesis protein; PFAM: Polysaccharide biosynthesis protein; SPTR: Lipopolysaccharide biosynthesis protein; sulfotransferase 380615 10814644 Flexsi_0358 Flexistipes sinusarabici DSM 4947 sulfotransferase YP_004602614.1 379875 R 717231 CDS YP_004602615.1 336322648 10814645 complement(380612..381952) 1 NC_015672.1 PFAM: Polysaccharide biosynthesis protein; polysaccharide biosynthesis protein 381952 10814645 Flexsi_0359 Flexistipes sinusarabici DSM 4947 polysaccharide biosynthesis protein YP_004602615.1 380612 R 717231 CDS YP_004602616.1 336322649 10814646 382312..382440 1 NC_015672.1 InterPro IPR008815; KEGG: fps:FP1126 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; hypothetical protein 382440 10814646 Flexsi_0360 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602616.1 382312 D 717231 CDS YP_004602617.1 336322650 10814647 complement(382437..382802) 1 NC_015672.1 PFAM: S23 ribosomal protein; COGs: COG1086 nucleoside-diphosphate sugar epimerase; InterPro IPR003869; KEGG: saf:SULAZ_0357 polysaccharide biosynthesis protein CapD; PFAM: Polysaccharide biosynthesis protein CapD-like; SPTR: Polysaccharide biosynthesis protein CapD; S23 ribosomal protein 382802 10814647 Flexsi_0361 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004602617.1 382437 R 717231 CDS YP_004602618.1 336322651 10814648 complement(383216..385069) 1 NC_015672.1 PFAM: Polysaccharide biosynthesis protein; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: wsu:WS0037 aminotransferase-like protein; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: AMINOTRANSFERASE HOMOLOG; polysaccharide biosynthesis protein CapD 385069 10814648 Flexsi_0362 Flexistipes sinusarabici DSM 4947 polysaccharide biosynthesis protein CapD YP_004602618.1 383216 R 717231 CDS YP_004602619.1 336322652 10814649 complement(385066..386178) 1 NC_015672.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG2148 Sugar transferase involved in lipopolysaccharide synthesis; InterPro IPR003362; KEGG: swp:swp_1585 sugar transferase; PFAM: Bacterial sugar transferase; SPTR: Sugar transferase; DegT/DnrJ/EryC1/StrS aminotransferase 386178 10814649 Flexsi_0363 Flexistipes sinusarabici DSM 4947 DegT/DnrJ/EryC1/StrS aminotransferase YP_004602619.1 385066 R 717231 CDS YP_004602620.1 336322653 10814650 complement(386188..386811) 1 NC_015672.1 PFAM: Bacterial sugar transferase; InterPro IPR003674; KEGG: cni:Calni_0126 oligosaccharyl transferase STT3 subunit; PFAM: Oligosaccharyl transferase, STT3 subunit; SPTR: Oligosaccharyl transferase STT3 subunit; sugar transferase 386811 10814650 Flexsi_0364 Flexistipes sinusarabici DSM 4947 sugar transferase YP_004602620.1 386188 R 717231 CDS YP_004602621.1 336322654 10814651 complement(386783..388846) 1 NC_015672.1 KEGG: sfu:Sfum_0792 hypothetical protein; SPTR: Putative uncharacterized protein; oligosaccharyl transferase STT3 subunit 388846 10814651 Flexsi_0365 Flexistipes sinusarabici DSM 4947 oligosaccharyl transferase STT3 subunit YP_004602621.1 386783 R 717231 CDS YP_004602622.1 336322655 10814652 complement(388931..389773) 1 NC_015672.1 PFAM: Sulfotransferase domain; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: rma:Rmag_0889 glycosyl transferase family protein; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase, family 2; hypothetical protein 389773 10814652 Flexsi_0366 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602622.1 388931 R 717231 CDS YP_004602623.1 336322656 10814653 complement(389770..390519) 1 NC_015672.1 PFAM: Glycosyl transferase family 2; InterPro IPR000863; KEGG: ter:Tery_3140 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase; family 2 glycosyl transferase 390519 10814653 Flexsi_0367 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004602623.1 389770 R 717231 CDS YP_004602624.1 336322657 10814654 complement(390516..391493) 1 NC_015672.1 PFAM: Sulfotransferase domain; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: fph:Fphi_1480 putative teichuronic acid biosynthesis glycosyl transferase; PFAM: Glycosyl transferase, family 2; SPTR: WfdV; sulfotransferase 391493 10814654 Flexsi_0368 Flexistipes sinusarabici DSM 4947 sulfotransferase YP_004602624.1 390516 R 717231 CDS YP_004602625.1 336322658 10814655 complement(391493..392296) 1 NC_015672.1 PFAM: Glycosyl transferase family 2; COGs: COG0463 Glycosyltransferase involved in cell wall biogenesis; InterPro IPR001173; KEGG: saf:SULAZ_1210 glycosyl transferase, family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyltransferase family 2; family 2 glycosyl transferase 392296 10814655 Flexsi_0369 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004602625.1 391493 R 717231 CDS YP_004602626.1 336322659 10814656 complement(392293..393492) 1 NC_015672.1 PFAM: Glycosyl transferase family 2; SPTR: Putative uncharacterized protein; family 2 glycosyl transferase 393492 10814656 Flexsi_0370 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004602626.1 392293 R 717231 CDS YP_004602627.1 336322660 10814657 complement(393604..394053) 1 NC_015672.1 hypothetical protein 394053 10814657 Flexsi_0371 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602627.1 393604 R 717231 CDS YP_004602628.1 336322661 10814658 complement(394022..394213) 1 NC_015672.1 KEGG: dba:Dbac_0822 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 394213 10814658 Flexsi_0372 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602628.1 394022 R 717231 CDS YP_004602629.1 336322662 10814659 complement(394405..394860) 1 NC_015672.1 PFAM: Domain of unknown function (DUF1814); InterPro IPR000863; KEGG: ter:Tery_3140 sulfotransferase; PFAM: Sulfotransferase; SPTR: Sulfotransferase; hypothetical protein 394860 10814659 Flexsi_0373 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602629.1 394405 R 717231 CDS YP_004602630.1 336322663 10814660 complement(395268..396236) 1 NC_015672.1 PFAM: Sulfotransferase domain; KEGG: syr:SynRCC307_0197 hypothetical protein; SPTR: Putative uncharacterized protein SynRCC307_0197; sulfotransferase 396236 10814660 Flexsi_0374 Flexistipes sinusarabici DSM 4947 sulfotransferase YP_004602630.1 395268 R 717231 CDS YP_004602631.1 336322664 10814661 complement(396237..397169) 1 NC_015672.1 COGs: COG2244 Membrane protein involved in the export of O-antigen and teichoic acid; InterPro IPR002797; KEGG: bfr:BF2582 capsular polysaccharide transporter; PFAM: Polysaccharide biosynthesis protein; SPTR: Capsular polysaccharide repeat unit transporter; hypothetical protein 397169 10814661 Flexsi_0375 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602631.1 396237 R 717231 CDS YP_004602632.1 336322665 10814662 complement(397183..398634) 1 NC_015672.1 PFAM: Polysaccharide biosynthesis protein; KEGG: fjo:Fjoh_0319 hypothetical protein; SPTR: Putative uncharacterized protein; polysaccharide biosynthesis protein 398634 10814662 Flexsi_0376 Flexistipes sinusarabici DSM 4947 polysaccharide biosynthesis protein YP_004602632.1 397183 R 717231 CDS YP_004602633.1 336322666 10814663 complement(398774..399520) 1 NC_015672.1 KEGG: cyc:PCC7424_4383 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 399520 10814663 Flexsi_0377 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602633.1 398774 R 717231 CDS YP_004602634.1 336322667 10814664 complement(399522..400574) 1 NC_015672.1 KEGG: ava:Ava_2392 putative carbamoylphosphate synthase large subunit short form; SPTR: Putative carbamoylphosphate synthase large subunit short form; hypothetical protein 400574 10814664 Flexsi_0378 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602634.1 399522 R 717231 CDS YP_004602635.1 336322668 10814665 complement(400577..401866) 1 NC_015672.1 COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: DegT/DnrJ/eryc1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; putative carbamoylphosphate synthase large subunit short form 401866 10814665 Flexsi_0379 Flexistipes sinusarabici DSM 4947 putative carbamoylphosphate synthase large subunit short form YP_004602635.1 400577 R 717231 CDS YP_004602636.1 336322669 10814666 complement(401863..402936) 1 NC_015672.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG1209 dTDP-glucose pyrophosphorylase; InterPro IPR005907:IPR005835; KEGG: son:SO_3186 glucose-1-phosphate-thymidylyltransferase; PFAM: Nucleotidyl transferase; PRIAM: Glucose-1-phosphate thymidylyltransferase; SPTR: Glucose-1-phosphate thymidylyltransferase; TIGRFAM: Glucose-1-phosphate thymidylyltransferase, long form; DegT/DnrJ/EryC1/StrS aminotransferase 402936 10814666 Flexsi_0380 Flexistipes sinusarabici DSM 4947 DegT/DnrJ/EryC1/StrS aminotransferase YP_004602636.1 401863 R 717231 CDS YP_004602637.1 336322670 10814667 complement(402958..403827) 1 NC_015672.1 PFAM: Nucleotidyl transferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase, short form; InterPro IPR008815; KEGG: gem:GM21_0610 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; glucose-1-phosphate thymidylyltransferase 403827 10814667 Flexsi_0381 Flexistipes sinusarabici DSM 4947 glucose-1-phosphate thymidylyltransferase YP_004602637.1 402958 R 717231 CDS YP_004602638.1 336322671 10814668 complement(404152..404514) 1 NC_015672.1 PFAM: S23 ribosomal protein; S23 ribosomal protein 404514 10814668 Flexsi_0382 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004602638.1 404152 R 717231 CDS YP_004602639.1 336322672 10814669 complement(404561..404761) 1 NC_015672.1 KEGG: sdl:Sdel_0830 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 404761 10814669 Flexsi_0383 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602639.1 404561 R 717231 CDS YP_004602640.1 336322673 10814670 complement(404869..405603) 1 NC_015672.1 KEGG: sdl:Sdel_0829 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 405603 10814670 Flexsi_0384 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602640.1 404869 R 717231 CDS YP_004602641.1 336322674 10814671 complement(405600..406064) 1 NC_015672.1 hypothetical protein 406064 10814671 Flexsi_0385 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602641.1 405600 R 717231 CDS YP_004602642.1 336322675 10814672 complement(406188..406343) 1 NC_015672.1 InterPro IPR008815; KEGG: fps:FP1126 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; hypothetical protein 406343 10814672 Flexsi_0386 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602642.1 406188 R 717231 CDS YP_004602643.1 336322676 10814673 complement(406322..406681) 1 NC_015672.1 PFAM: S23 ribosomal protein; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cni:Calni_1166 gdp-L-fucose synthase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-L-fucose synthase; SPTR: GDP-L-fucose synthase; S23 ribosomal protein 406681 10814673 Flexsi_0387 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004602643.1 406322 R 717231 CDS YP_004602644.1 336322677 10814674 complement(406792..408105) 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; InterPro IPR008815; KEGG: cni:Calni_1165 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: Putative uncharacterized protein; GDP-L-fucose synthase 408105 10814674 Flexsi_0388 Flexistipes sinusarabici DSM 4947 GDP-L-fucose synthase YP_004602644.1 406792 R 717231 CDS YP_004602645.1 336322678 10814675 complement(408139..408501) 1 NC_015672.1 PFAM: S23 ribosomal protein; COGs: COG1089 GDP-D-mannose dehydratase; InterPro IPR006368:IPR001509; KEGG: gem:GM21_3149 GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: GDP-mannose 4,6-dehydratase; SPTR: GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; S23 ribosomal protein 408501 10814675 Flexsi_0389 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004602645.1 408139 R 717231 CDS YP_004602646.1 336322679 10814676 complement(408546..409754) 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: GDP-mannose 4,6-dehydratase; InterPro IPR008815; KEGG: sru:SRU_1288 hypothetical protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; GDP-mannose 4,6-dehydratase 409754 10814676 Flexsi_0390 Flexistipes sinusarabici DSM 4947 GDP-mannose 4,6-dehydratase YP_004602646.1 408546 R 717231 CDS YP_004602647.1 336322680 10814677 complement(410074..410430) 1 NC_015672.1 PFAM: S23 ribosomal protein; COGs: COG2250 conserved hypothetical protein related to C-terminal domain of eukaryotic chaperone SACSIN; InterPro IPR007842; KEGG: sua:Saut_2008 HEPN domain-containing protein; PFAM: HEPN; SMART: HEPN; SPTR: HEPN domain protein; S23 ribosomal protein 410430 10814677 Flexsi_0391 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004602647.1 410074 R 717231 CDS YP_004602648.1 336322681 10814678 complement(410742..411158) 1 NC_015672.1 PFAM: HEPN domain; InterPro IPR002934; KEGG: sua:Saut_2009 hypothetical protein; PFAM: Nucleotidyltransferase; SPTR: Putative uncharacterized protein; HEPN domain-containing protein 411158 10814678 Flexsi_0392 Flexistipes sinusarabici DSM 4947 HEPN domain-containing protein YP_004602648.1 410742 R 717231 CDS YP_004602649.1 336322682 10814679 complement(411127..411495) 1 NC_015672.1 PFAM: Nucleotidyltransferase domain; COGs: COG1087 UDP-glucose 4-epimerase; InterPro IPR005886:IPR001509; KEGG: cni:Calni_0166 udp-galactose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucose 4-epimerase; SPTR: UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; DNA polymerase beta domain-containing protein 411495 10814679 Flexsi_0393 Flexistipes sinusarabici DSM 4947 DNA polymerase beta domain-containing protein YP_004602649.1 411127 R 717231 CDS YP_004602650.1 336322683 10814680 complement(411722..412777) 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: UDP-glucose-4-epimerase; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; UDP-glucose 4-epimerase 412777 10814680 Flexsi_0394 Flexistipes sinusarabici DSM 4947 UDP-glucose 4-epimerase YP_004602650.1 411722 R 717231 CDS YP_004602651.1 336322684 10814681 413183..415018 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: ddf:DEFDS_1468 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Long-chain fatty-acid-CoA ligase; transposase IS4 family protein 415018 10814681 Flexsi_0395 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602651.1 413183 D 717231 CDS YP_004602652.1 336322685 10814682 415169..417028 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG1250 3-hydroxyacyl-CoA dehydrogenase; InterPro IPR006176:IPR006108:IPR001753; KEGG: ddf:DEFDS_1467 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; PFAM: 3-hydroxyacyl-CoA dehydrogenase, NAD binding; 3-hydroxyacyl-CoA dehydrogenase, C-terminal; Crotonase, core; SPTR: 3-hydroxyacyl-CoA dehydrogenase/enoyl-CoA hydratase; long-chain-fatty-acid--CoA ligase 417028 10814682 Flexsi_0396 Flexistipes sinusarabici DSM 4947 long-chain-fatty-acid--CoA ligase YP_004602652.1 415169 D 717231 CDS YP_004602653.1 336322686 10814683 417025..419412 1 NC_015672.1 PFAM: Enoyl-CoA hydratase/isomerase family; 3-hydroxyacyl-CoA dehydrogenase, C-terminal domain; 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: ddf:DEFDS_1466 3-ketoacyl-CoA thiolase; PRIAM: Acetyl-CoA C-acyltransferase; SPTR: 3-ketoacyl-CoA thiolase; TIGRFAM: Thiolase; 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein 419412 10814683 Flexsi_0397 Flexistipes sinusarabici DSM 4947 3-hydroxyacyl-CoA dehydrogenase NAD-binding protein YP_004602653.1 417025 D 717231 CDS YP_004602654.1 336322687 10814684 419429..420607 1 NC_015672.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: ddf:DEFDS_1465 acyl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Acyl-CoA dehydrogenase; acetyl-CoA acetyltransferase 420607 10814684 Flexsi_0398 Flexistipes sinusarabici DSM 4947 acetyl-CoA acetyltransferase YP_004602654.1 419429 D 717231 CDS YP_004602655.1 336322688 10814685 420924..422699 1 NC_015672.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG0824 thioesterase; InterPro IPR006684:IPR006683; KEGG: thioesterase superfamily protein; PFAM: Thioesterase superfamily; SPTR: Thioesterase superfamily protein; TIGRFAM: 4-hydroxybenzoyl-CoA thioesterase; butyryl-CoA dehydrogenase 422699 10814685 Flexsi_0399 Flexistipes sinusarabici DSM 4947 butyryl-CoA dehydrogenase YP_004602655.1 420924 D 717231 CDS YP_004602656.1 336322689 10814686 complement(422728..423120) 1 NC_015672.1 PFAM: Thioesterase superfamily; TIGRFAM: acyl-CoA thioester hydrolase, YbgC/YbaW family; KEGG: ddf:DEFDS_1839 hypothetical protein; SPTR: Putative uncharacterized protein; 4-hydroxybenzoyl-CoA thioesterase 423120 10814686 Flexsi_0400 Flexistipes sinusarabici DSM 4947 4-hydroxybenzoyl-CoA thioesterase YP_004602656.1 422728 R 717231 CDS YP_004602657.1 336322690 10814687 complement(423139..423705) 1 NC_015672.1 PFAM: Chalcone-flavanone isomerase; hypothetical protein 423705 10814687 Flexsi_0401 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602657.1 423139 R 717231 CDS YP_004602658.1 336322691 10814688 423859..424011 1 NC_015672.1 COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ddf:DEFDS_1835 3-hydroxybutyryl-CoA dehydratase; PFAM: Crotonase, core; PRIAM: 3-hydroxybutyryl-CoA dehydratase; SPTR: 3-hydroxybutyryl-CoA dehydratase; hypothetical protein 424011 10814688 Flexsi_0402 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602658.1 423859 D 717231 CDS YP_004602659.1 336322692 10814689 424097..424873 1 NC_015672.1 PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1960 Acyl-CoA dehydrogenase; InterPro IPR006092:IPR006091:IPR006090; KEGG: ddf:DEFDS_1834 butyryl-CoA dehydrogenase; PFAM: Acyl-CoA oxidase/dehydrogenase, type 1; Acyl-CoA dehydrogenase, N-terminal; Acyl-CoA oxidase/dehydrogenase, central region; PRIAM: Butyryl-CoA dehydrogenase; SPTR: Butyryl-CoA dehydrogenase; 3-hydroxybutyryl-CoA dehydratase 424873 10814689 Flexsi_0403 Flexistipes sinusarabici DSM 4947 3-hydroxybutyryl-CoA dehydratase YP_004602659.1 424097 D 717231 CDS YP_004602660.1 336322693 10814690 424883..426022 1 NC_015672.1 PFAM: Acyl-CoA dehydrogenase, C-terminal domain; Acyl-CoA dehydrogenase, middle domain; Acyl-CoA dehydrogenase, N-terminal domain; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR001450:IPR004017; KEGG: ddf:DEFDS_1833 iron-sulfur cluster-binding protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Iron-sulfur cluster-binding protein; butyryl-CoA dehydrogenase 426022 10814690 Flexsi_0404 Flexistipes sinusarabici DSM 4947 butyryl-CoA dehydrogenase YP_004602660.1 424883 D 717231 CDS YP_004602661.1 336322694 10814691 426247..428244 1 NC_015672.1 PFAM: Cysteine-rich domain; Nitrate reductase gamma subunit; COGs: COG2086 Electron transfer flavoprotein beta subunit; InterPro IPR014730; KEGG: ddf:DEFDS_1832 electron transfer flavoprotein subunit beta; PFAM: Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, beta subunit; hypothetical protein 428244 10814691 Flexsi_0405 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602661.1 426247 D 717231 CDS YP_004602662.1 336322695 10814692 428244..429008 1 NC_015672.1 PFAM: Electron transfer flavoprotein domain; COGs: COG2025 Electron transfer flavoprotein alpha subunit; InterPro IPR014730:IPR014731; KEGG: ddf:DEFDS_1831 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein, alpha subunit, C-terminal; Electron transfer flavoprotein, alpha/beta-subunit, N-terminal; SPTR: Electron transfer flavoprotein, alpha subunit; electron transfer flavoprotein subunit alpha/beta 429008 10814692 Flexsi_0406 Flexistipes sinusarabici DSM 4947 electron transfer flavoprotein subunit alpha/beta YP_004602662.1 428244 D 717231 CDS YP_004602663.1 336322696 10814693 429018..429932 1 NC_015672.1 PFAM: Electron transfer flavoprotein domain; Electron transfer flavoprotein FAD-binding domain; COGs: COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenase; InterPro IPR006115; KEGG: tye:THEYE_A0982 3-hydroxyisobutyrate dehydrogenase; PFAM: 6-phosphogluconate dehydrogenase, NAD-binding; PRIAM: 3-hydroxyisobutyrate dehydrogenase; SPTR: 3-hydroxyisobutyrate dehydrogenase; electron transfer flavoprotein subunit alpha 429932 10814693 Flexsi_0407 Flexistipes sinusarabici DSM 4947 electron transfer flavoprotein subunit alpha YP_004602663.1 429018 D 717231 CDS YP_004602664.1 336322697 10814694 complement(430187..431044) 1 NC_015672.1 PFAM: NAD binding domain of 6-phosphogluconate dehydrogenase; KEGG: csh:Closa_3415 protein of unknown function DUF342; SPTR: Putative uncharacterized protein; 3-hydroxyisobutyrate dehydrogenase 431044 10814694 Flexsi_0408 Flexistipes sinusarabici DSM 4947 3-hydroxyisobutyrate dehydrogenase YP_004602664.1 430187 R 717231 CDS YP_004602665.1 336322698 10814695 complement(431044..431850) 1 NC_015672.1 PFAM: Protein of unknown function (DUF342); COGs: COG0415 Deoxyribodipyrimidine photolyase; InterPro IPR006050:IPR005101; KEGG: sku:Sulku_1616 deoxyribodipyrimidine photo-lyase; PFAM: DNA photolyase, FAD-binding/Cryptochrome, C-terminal; DNA photolyase, N-terminal; PRIAM: Deoxyribodipyrimidine photo-lyase; SPTR: Deoxyribodipyrimidine photo-lyase; hypothetical protein 431850 10814695 Flexsi_0409 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602665.1 431044 R 717231 CDS YP_004602666.1 336322699 10814696 complement(432004..433386) 1 NC_015672.1 PFAM: FAD binding domain of DNA photolyase; DNA photolyase; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_1618 Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, Rrf2 family; deoxyribodipyrimidine photo-lyase 433386 10814696 Flexsi_0410 Flexistipes sinusarabici DSM 4947 deoxyribodipyrimidine photo-lyase YP_004602666.1 432004 R 717231 CDS YP_004602667.1 336322700 10814697 433638..434063 1 NC_015672.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1271 Cytochrome bd-type quinol oxidase subunit 1; InterPro IPR002585; KEGG: ddf:DEFDS_1619 cytochrome bd oxidase subunit I; PFAM: Cytochrome bd ubiquinol oxidase, subunit I; SPTR: Cytochrome bd oxidase subunit I; BadM/Rrf2 family transcriptional regulator 434063 10814697 Flexsi_0411 Flexistipes sinusarabici DSM 4947 BadM/Rrf2 family transcriptional regulator YP_004602667.1 433638 D 717231 CDS YP_004602668.1 336322701 10814698 434083..435405 1 NC_015672.1 PFAM: Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1294 Cytochrome bd-type quinol oxidase subunit 2; InterPro IPR003317; KEGG: ddf:DEFDS_1620 cytochrome bd oxidase subunit II; PFAM: Cytochrome bd ubiquinol oxidase, subunit II; SPTR: Cytochrome bd oxidase subunit II; TIGRFAM: Cytochrome bd ubiquinol oxidase, subunit II; cytochrome bd ubiquinol oxidase subunit I 435405 10814698 Flexsi_0412 Flexistipes sinusarabici DSM 4947 cytochrome bd ubiquinol oxidase subunit I YP_004602668.1 434083 D 717231 CDS YP_004602669.1 336322702 10814699 435429..436466 1 NC_015672.1 PFAM: Cytochrome oxidase subunit II; TIGRFAM: cytochrome d oxidase, subunit II (cydB); KEGG: cni:Calni_0626 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome d ubiquinol oxidase subunit II 436466 10814699 Flexsi_0413 Flexistipes sinusarabici DSM 4947 cytochrome d ubiquinol oxidase subunit II YP_004602669.1 435429 D 717231 CDS YP_004602670.1 336322703 10814700 436749..437552 1 NC_015672.1 hypothetical protein 437552 10814700 Flexsi_0414 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602670.1 436749 D 717231 CDS YP_004602671.1 336322704 10814702 438104..438328 1 NC_015672.1 hypothetical protein 438328 10814702 Flexsi_0415 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602671.1 438104 D 717231 CDS YP_004602672.1 336322705 10814703 438481..438702 1 NC_015672.1 InterPro IPR002941; KEGG: cts:Ctha_1153 DNA methylase N-4/N-6 domain-containing protein; PFAM: DNA methylase N-4/N-6; SPTR: DNA methylase N-4/N-6 domain protein; hypothetical protein 438702 10814703 Flexsi_0416 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602672.1 438481 D 717231 CDS YP_004602673.1 336322706 10814704 438889..440466 1 NC_015672.1 PFAM: DNA methylase; InterPro IPR019045; KEGG: mja:MJ_1449 hypothetical protein; PFAM: Restriction endonuclease, type II, MjaII; PRIAM: Type II site-specific deoxyribonuclease; SPTR: Putative Type II restriction enzyme MjaII (Endonuclease MjaII) (R.MjaII); DNA methylase N-4/N-6 domain-containing protein 440466 10814704 Flexsi_0417 Flexistipes sinusarabici DSM 4947 DNA methylase N-4/N-6 domain-containing protein YP_004602673.1 438889 D 717231 CDS YP_004602674.1 336322707 10814705 440494..441549 1 NC_015672.1 PFAM: MjaII restriction endonuclease; KEGG: dap:Dacet_2661 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; type II site-specific deoxyribonuclease 441549 10814705 Flexsi_0418 Flexistipes sinusarabici DSM 4947 type II site-specific deoxyribonuclease YP_004602674.1 440494 D 717231 CDS YP_004602675.1 336322708 10814706 complement(441555..441770) 1 NC_015672.1 InterPro IPR006675:IPR006674:IPR003607; KEGG: dak:DaAHT2_1884 metal dependent phosphohydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Metal dependent phosphohydrolase; TIGRFAM: HDIG; hypothetical protein 441770 10814706 Flexsi_0419 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602675.1 441555 R 717231 CDS YP_004602676.1 336322709 10814707 441876..442826 1 NC_015672.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; metal dependent phosphohydrolase 442826 10814707 Flexsi_0420 Flexistipes sinusarabici DSM 4947 metal dependent phosphohydrolase YP_004602676.1 441876 D 717231 CDS YP_004602677.1 336322710 10814708 443062..443787 1 NC_015672.1 KEGG: cch:Cag_0599 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 443787 10814708 Flexsi_0421 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602677.1 443062 D 717231 CDS YP_004602678.1 336322711 10814709 443852..444700 1 NC_015672.1 KEGG: pna:Pnap_4357 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 444700 10814709 Flexsi_0422 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602678.1 443852 D 717231 CDS YP_004602679.1 336322712 10814710 444846..445475 1 NC_015672.1 KEGG: sat:SYN_00500 metallo-beta-lactamase superfamily hydrolase; SPTR: Hydrolase of the metallo-beta-lactamase superfamily; hypothetical protein 445475 10814710 Flexsi_0423 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602679.1 444846 D 717231 CDS YP_004602680.1 336322713 10814711 445499..446524 1 NC_015672.1 KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; metallo-beta-lactamase superfamily hydrolase 446524 10814711 Flexsi_0424 Flexistipes sinusarabici DSM 4947 metallo-beta-lactamase superfamily hydrolase YP_004602680.1 445499 D 717231 CDS YP_004602681.1 336322714 10814712 446609..447229 1 NC_015672.1 KEGG: hch:HCH_05638 restriction endonuclease; SPTR: Predicted restriction endonuclease; hypothetical protein 447229 10814712 Flexsi_0425 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602681.1 446609 D 717231 CDS YP_004602682.1 336322715 10814713 447325..448038 1 NC_015672.1 KEGG: ddf:DEFDS_0872 hypothetical protein; SPTR: Putative uncharacterized protein; restriction endonuclease 448038 10814713 Flexsi_0426 Flexistipes sinusarabici DSM 4947 restriction endonuclease YP_004602682.1 447325 D 717231 CDS YP_004602683.1 336322716 10814714 448634..449644 1 NC_015672.1 KEGG: ddf:DEFDS_0871 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 449644 10814714 Flexsi_0427 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602683.1 448634 D 717231 CDS YP_004602684.1 336322717 10814715 449646..450056 1 NC_015672.1 hypothetical protein 450056 10814715 Flexsi_0428 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602684.1 449646 D 717231 CDS YP_004602685.1 336322718 10814716 450248..450634 1 NC_015672.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: dat:HRM2_17930 hypothetical protein; PFAM: Integrase, catalytic core, phage; SPTR: Putative uncharacterized protein; hypothetical protein 450634 10814716 Flexsi_0429 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602685.1 450248 D 717231 CDS YP_004602686.1 336322719 10814717 complement(450643..451800) 1 NC_015672.1 PFAM: Phage integrase family; COGs: COG3285 eukaryotic-type DNA primase; InterPro IPR014145:IPR002755; KEGG: mpd:MCP_2125 hypothetical protein; PFAM: DNA primase, small subunit; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase LigD, polymerase domain; integrase family protein 451800 10814717 Flexsi_0430 Flexistipes sinusarabici DSM 4947 integrase family protein YP_004602686.1 450643 R 717231 CDS YP_004602687.1 336322720 10814718 452503..453378 1 NC_015672.1 TIGRFAM: DNA ligase D; DNA polymerase LigD, polymerase domain; COGs: COG0266 Formamidopyrimidine-DNA glycosylase; InterPro IPR012319:IPR015886; KEGG: gfo:GFO_3213 formamidopyrimidine-DNA glycosylase; PFAM: DNA glycosylase/AP lyase, catalytic domain; DNA glycosylase/AP lyase, H2TH DNA-binding; PRIAM: DNA-formamidopyrimidine glycosylase; SPTR: Formamidopyrimidine-DNA glycosylase; DNA polymerase LigD, polymerase domain-containing protein 453378 10814718 Flexsi_0431 Flexistipes sinusarabici DSM 4947 DNA polymerase LigD, polymerase domain-containing protein YP_004602687.1 452503 D 717231 CDS YP_004602688.1 336322721 10814719 453380..454177 1 NC_015672.1 PFAM: Formamidopyrimidine-DNA glycosylase H2TH domain; Formamidopyrimidine-DNA glycosylase N-terminal domain; TIGRFAM: formamidopyrimidine-DNA glycosylase (fpg); COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027; KEGG: cni:Calni_1870 fad-dependent pyridine nucleotide-disulfide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: FAD-dependent pyridine nucleotide-disulfide oxidoreductase; DNA-formamidopyrimidine glycosylase 454177 10814719 Flexsi_0432 Flexistipes sinusarabici DSM 4947 DNA-formamidopyrimidine glycosylase YP_004602688.1 453380 D 717231 CDS YP_004602689.1 336322722 10814720 454736..456682 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterPro IPR001041:IPR019574:IPR001450:IPR006656; KEGG: ddf:DEFDS_1612 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; Ferredoxin; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Molybdopterin oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; glutamate synthase 456682 10814720 Flexsi_0433 Flexistipes sinusarabici DSM 4947 glutamate synthase YP_004602689.1 454736 D 717231 CDS YP_004602690.1 336322723 10814721 456697..458922 1 NC_015672.1 PFAM: Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; InterPro IPR002559; KEGG: dal:Dalk_1317 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Isrso9-transposase protein; NADH dehydrogenase (quinone) 458922 10814721 Flexsi_0434 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004602690.1 456697 D 717231 CDS YP_004602691.1 336322724 10814722 complement(459087..459866) 1 NC_015672.1 KEGG: glo:Glov_3666 transposase IS4 family protein; SPTR: Transposase IS4 family protein; transposase IS4 family protein 459866 10814722 Flexsi_0435 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602691.1 459087 R 717231 CDS YP_004602692.1 336322725 10814723 complement(459902..460453) 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG1001 Adenine deaminase; HAMAP: Adenine deaminase; InterPro IPR006679:IPR006680; KEGG: adenine deaminase; PFAM: Amidohydrolase 1; PRIAM: Adenine deaminase; SPTR: Adenine deaminase; TIGRFAM: Adenine deaminase; transposase IS4 family protein 460453 10814723 Flexsi_0436 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602692.1 459902 R 717231 CDS YP_004602693.1 336322726 10814724 complement(460608..462227) 1 NC_015672.1 PFAM: Amidohydrolase family; TIGRFAM: adenine deaminase; COGs: COG2252 Permease; InterPro IPR006043; KEGG: shl:Shal_3171 xanthine/uracil/vitamin C permease; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Probable transporter; adenine deaminase 462227 10814724 Flexsi_0437 Flexistipes sinusarabici DSM 4947 adenine deaminase YP_004602693.1 460608 R 717231 CDS YP_004602694.1 336322727 10814725 complement(462231..463529) 1 NC_015672.1 PFAM: Permease family; xanthine/uracil/vitamin C permease 463529 10814725 Flexsi_0438 Flexistipes sinusarabici DSM 4947 xanthine/uracil/vitamin C permease YP_004602694.1 462231 R 717231 CDS YP_004602695.1 336322728 10814726 complement(464369..464785) 1 NC_015672.1 COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR003346; KEGG: sfu:Sfum_2600 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS116/IS110/IS902; SPTR: Transposase IS116/IS110/IS902; hypothetical protein 464785 10814726 Flexsi_0439 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602695.1 464369 R 717231 CDS YP_004602696.1 336322729 10814727 465051..466073 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; InterPro IPR019641; KEGG: nla:NLA_12350 hypothetical protein; PFAM: Protein of unknown function DUF2506; SPTR: Putative uncharacterized protein; transposase IS116/IS110/IS902 family protein 466073 10814727 Flexsi_0440 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004602696.1 465051 D 717231 CDS YP_004602697.1 336322730 10814728 complement(466645..467013) 1 NC_015672.1 PFAM: Protein of unknown function (DUF2628); manually curated; hypothetical protein 467013 10814728 Flexsi_0441 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602697.1 466645 R 717231 CDS YP_004602698.1 336322731 10814730 complement(467558..467791) 1 NC_015672.1 InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 467791 10814730 Flexsi_0443 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602698.1 467558 R 717231 CDS YP_004602699.1 336322732 10814731 complement(468078..469397) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0749 DNA polymerase I - 3'-5' exonuclease and polymerase domains; InterProIPR018320:IPR020046:IPR020047:IPR001098:IPR 002421:IPR008918; KEGG: cni:Calni_1275 DNA polymerase I; PFAM: DNA-directed DNA polymerase, family A, palm domain; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; PRIAM: DNA-directed DNA polymerase; SMART: 5'-3' exonuclease, N-terminal; Helix-hairpin-helix motif, class 2; DNA-directed DNA polymerase, family A, palm domain; SPTR: DNA polymerase I; TIGRFAM: DNA polymerase 1; transposase IS4 family protein 469397 10814731 Flexsi_0444 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602699.1 468078 R 717231 CDS YP_004602700.1 336322733 10814732 470175..472556 1 NC_015672.1 PFAM: 5'-3' exonuclease, C-terminal SAM fold; DNA polymerase family A; 5'-3' exonuclease, N-terminal resolvase-like domain; TIGRFAM: DNA polymerase I; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_1966 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; DNA polymerase I 472556 10814732 Flexsi_0445 Flexistipes sinusarabici DSM 4947 DNA polymerase I YP_004602700.1 470175 D 717231 CDS YP_004602701.1 336322734 10814733 472587..473627 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0141 Histidinol dehydrogenase; HAMAP: Histidinol dehydrogenase, prokaryotic-type; InterPro IPR012131; KEGG: ddf:DEFDS_1965 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase, prokaryotic-type; PRIAM: Histidinol dehydrogenase; SPTR: Histidinol dehydrogenase; TIGRFAM: Histidinol dehydrogenase, prokaryotic-type; diguanylate cyclase 473627 10814733 Flexsi_0446 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004602701.1 472587 D 717231 CDS YP_004602702.1 336322735 10814734 473646..474911 1 NC_015672.1 PFAM: Histidinol dehydrogenase; TIGRFAM: histidinol dehydrogenase; InterPro IPR008258:IPR018392:IPR002482; KEGG: ddf:DEFDS_1862 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; Peptidoglycan-binding lysin domain; SPTR: Lytic transglycosylase, catalytic; histidinol dehydrogenase 474911 10814734 Flexsi_0447 Flexistipes sinusarabici DSM 4947 histidinol dehydrogenase YP_004602702.1 473646 D 717231 CDS YP_004602703.1 336322736 10814735 474986..476599 1 NC_015672.1 PFAM: Transglycosylase SLT domain; LysM domain; lytic transglycosylase catalytic subunit 476599 10814735 Flexsi_0448 Flexistipes sinusarabici DSM 4947 lytic transglycosylase catalytic subunit YP_004602703.1 474986 D 717231 CDS YP_004602704.1 336322737 10814740 477125..478315 1 NC_015672.1 PFAM: Elongation factor Tu C-terminal domain; Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; HAMAP: Ribosomal protein L33; InterPro IPR001705; KEGG: ddf:DEFDS_1786 50S ribosomal protein L33; PFAM: Ribosomal protein L33; SPTR: 50S ribosomal protein L33; TIGRFAM: Ribosomal protein L33; translation elongation factor Tu 478315 10814740 Flexsi_0449 Flexistipes sinusarabici DSM 4947 translation elongation factor Tu YP_004602704.1 477125 D 717231 CDS YP_004602705.1 336322738 10814741 478322..478471 1 NC_015672.1 PFAM: Ribosomal protein L33; TIGRFAM: ribosomal protein L33, bacterial type; 50S ribosomal protein L33 478471 10814741 Flexsi_0450 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L33 YP_004602705.1 478322 D 717231 CDS YP_004602706.1 336322739 10814743 478582..478764 1 NC_015672.1 PFAM: SecE/Sec61-gamma subunits of protein translocation complex; TIGRFAM: preprotein translocase, SecE subunit, bacterial; COGs: COG0250 Transcription antiterminator; InterPro IPR001062:IPR006645:IPR005824; KEGG: dap:Dacet_0360 NusG antitermination factor; PFAM: Transcription antitermination protein, NusG, N-terminal; KOW; SMART: Transcription antitermination protein, NusG, N-terminal; KOW; SPTR: Transcription antitermination protein nusG; TIGRFAM: Transcription antitermination protein, NusG; preprotein translocase subunit SecE 478764 10814743 Flexsi_0451 Flexistipes sinusarabici DSM 4947 preprotein translocase subunit SecE YP_004602706.1 478582 D 717231 CDS YP_004602707.1 336322740 10814744 478769..479293 1 NC_015672.1 PFAM: Transcription termination factor nusG; KOW motif; TIGRFAM: transcription termination/antitermination factor NusG; COGs: COG0080 Ribosomal protein L11; InterPro IPR006519:IPR020784:IPR020783:IPR000911; KEGG: cni:Calni_1532 LSU ribosomal protein l11p; PFAM: Ribosomal protein L11, N-terminal; Ribosomal protein L11, C-terminal; SMART: Ribosomal protein L11; SPTR: 50S ribosomal protein L11; TIGRFAM: Ribosomal protein L11, bacterial-type; NusG antitermination factor 479293 10814744 Flexsi_0452 Flexistipes sinusarabici DSM 4947 NusG antitermination factor YP_004602707.1 478769 D 717231 CDS YP_004602708.1 336322741 10814745 479312..479737 1 NC_015672.1 PFAM: Ribosomal protein L11, RNA binding domain; Ribosomal protein L11, N-terminal domain; TIGRFAM: 50S ribosomal protein L11; COGs: COG0081 Ribosomal protein L1; InterPro IPR005878:IPR002143; KEGG: cni:Calni_1531 LSU ribosomal protein l1p; PFAM: Ribosomal protein L1; SPTR: 50S ribosomal protein L1; TIGRFAM: Ribosomal protein L1, bacterial-type; 50S ribosomal protein L11 479737 10814745 Flexsi_0453 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L11 YP_004602708.1 479312 D 717231 CDS YP_004602709.1 336322742 10814746 479753..480460 1 NC_015672.1 PFAM: Ribosomal protein L1p/L10e family; TIGRFAM: ribosomal protein L1, bacterial/chloroplast; COGs: COG0244 Ribosomal protein L10; HAMAP: 50S ribosomal protein L10; InterPro IPR001790; KEGG: ddf:DEFDS_1781 50S ribosomal protein L10; PFAM: Ribosomal protein L10; SPTR: 50S ribosomal protein L10; 50S ribosomal protein L1 480460 10814746 Flexsi_0454 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L1 YP_004602709.1 479753 D 717231 CDS YP_004602710.1 336322743 10814747 480557..481078 1 NC_015672.1 PFAM: Ribosomal protein L10; COGs: COG0222 Ribosomal protein L7/L12; HAMAP: Ribosomal protein L7/L12; InterPro IPR000206:IPR013823; KEGG: ddf:DEFDS_1780 50S ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12, C-terminal; SPTR: 50S ribosomal protein L7/L12; TIGRFAM: Ribosomal protein L7/L12; 50S ribosomal protein L10 481078 10814747 Flexsi_0455 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L10 YP_004602710.1 480557 D 717231 CDS YP_004602711.1 336322744 10814748 481096..481479 1 NC_015672.1 PFAM: Ribosomal protein L7/L12 C-terminal domain; TIGRFAM: ribosomal protein L7/L12; COGs: COG0085 DNA-directed RNA polymerase beta subunit/140 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta; InterProIPR010243:IPR007644:IPR007642:IPR007645:IPR 019462:IPR007120:IPR007641; KEGG: ddf:DEFDS_1779 DNA-directed RNA polymerase subunit beta; PFAM: DNA-directed RNA polymerase, subunit 2, domain 6; RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 2; RNA polymerase, beta subunit, protrusion; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2, domain 7; SPTR: DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit, bacterial-type; 50S ribosomal protein L7/L12 481479 10814748 Flexsi_0456 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L7/L12 YP_004602711.1 481096 D 717231 CDS YP_004602712.1 336322745 10814749 481577..485548 1 NC_015672.1 PFAM: RNA polymerase Rpb2, domain 3; RNA polymerase Rpb2, domain 6; RNA polymerase beta subunit external 1 domain; RNA polymerase Rpb2, domain 2; RNA polymerase beta subunit; RNA polymerase Rpb2, domain 7; TIGRFAM: DNA-directed RNA polymerase, beta subunit; COGs: COG0086 DNA-directed RNA polymerase beta' subunit/160 kD subunit; HAMAP: DNA-directed RNA polymerase subunit beta'; InterProIPR012754:IPR007080:IPR000722:IPR007066:IPR 007083:IPR007081:IPR006592; KEGG: ddf:DEFDS_1778 DNA-directed RNA polymerase subunit beta'; PFAM: RNA polymerase Rpb1, domain 1; RNA polymerase, alpha subunit; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 5; SMART: RNA polymerase, N-terminal; SPTR: DNA-directed RNA polymerase subunit beta'; TIGRFAM: DNA-directed RNA polymerase, subunit beta-prime; DNA-directed RNA polymerase subunit beta 485548 10814749 Flexsi_0457 Flexistipes sinusarabici DSM 4947 DNA-directed RNA polymerase subunit beta YP_004602712.1 481577 D 717231 CDS YP_004602713.1 336322746 10814750 485560..489618 1 NC_015672.1 PFAM: RNA polymerase Rpb1, domain 2; RNA polymerase Rpb1, domain 4; RNA polymerase Rpb1, domain 1; RNA polymerase Rpb1, domain 3; RNA polymerase Rpb1, domain 5; TIGRFAM: DNA-directed RNA polymerase, beta' subunit, predominant form; COGs: COG0048 Ribosomal protein S12; InterPro IPR005679:IPR006032; KEGG: ddf:DEFDS_1777 30S ribosomal protein S12; PFAM: Ribosomal protein S12/S23; SPTR: 30S ribosomal protein S12; TIGRFAM: Ribosomal protein S12, bacterial-type; DNA-directed RNA polymerase subunit beta' 489618 10814750 Flexsi_0458 Flexistipes sinusarabici DSM 4947 DNA-directed RNA polymerase subunit beta' YP_004602713.1 485560 D 717231 CDS YP_004602714.1 336322747 10814751 489829..490200 1 NC_015672.1 PFAM: Ribosomal protein S12; TIGRFAM: ribosomal protein S12, bacterial/organelle; COGs: COG0049 Ribosomal protein S7; InterPro IPR005717:IPR000235; KEGG: ddf:DEFDS_1776 30S ribosomal protein S7; PFAM: Ribosomal protein S7; SPTR: 30S ribosomal protein S7; TIGRFAM: Ribosomal protein S7, bacterial-type; 30S ribosomal protein S12 490200 10814751 Flexsi_0459 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S12 YP_004602714.1 489829 D 717231 CDS YP_004602715.1 336322748 10814752 490213..490683 1 NC_015672.1 PFAM: Ribosomal protein S7p/S5e; TIGRFAM: ribosomal protein S7, bacterial/organelle; COGs: COG0480 Translation elongation factors (GTPase); InterProIPR004540:IPR005225:IPR000795:IPR004161:IPR 005517:IPR000640; KEGG: ddf:DEFDS_1775 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G 2; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; 30S ribosomal protein S7 490683 10814752 Flexsi_0460 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S7 YP_004602715.1 490213 D 717231 CDS YP_004602716.1 336322749 10814753 490696..492771 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0050 GTPase - translation elongation factors; InterProIPR004160:IPR004541:IPR005225:IPR004161:IPR 000795; KEGG: ddf:DEFDS_1787 translation elongation factor Tu; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, C-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Elongation factor Tu; TIGRFAM: Translation elongation factor EFTu/EF1A, bacterial/organelle; Small GTP-binding protein; translation elongation factor G 492771 10814753 Flexsi_0461 Flexistipes sinusarabici DSM 4947 translation elongation factor G YP_004602716.1 490696 D 717231 CDS YP_004602717.1 336322750 10814754 492787..493977 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu C-terminal domain; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation elongation factor TU; COGs: COG0051 Ribosomal protein S10; HAMAP: 30S ribosomal protein S10; InterPro IPR005731:IPR001848; KEGG: dap:Dacet_0371 30S ribosomal protein S10; PFAM: Ribosomal protein S10; SPTR: 30S ribosomal protein S10; TIGRFAM: Ribosomal protein S10, bacterial; translation elongation factor Tu 493977 10814754 Flexsi_0462 Flexistipes sinusarabici DSM 4947 translation elongation factor Tu YP_004602717.1 492787 D 717231 CDS YP_004602718.1 336322751 10814755 493990..494298 1 NC_015672.1 PFAM: Ribosomal protein S10p/S20e; TIGRFAM: ribosomal protein S10, bacterial/organelle; COGs: COG0087 Ribosomal protein L3; InterPro IPR019927:IPR000597; KEGG: ddf:DEFDS_1772 50S ribosomal protein L3; PFAM: Ribosomal protein L3; SPTR: 50S ribosomal protein L3; TIGRFAM: Ribosomal protein L3, bacterial/organelle-type; 30S ribosomal protein S10 494298 10814755 Flexsi_0463 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S10 YP_004602718.1 493990 D 717231 CDS YP_004602719.1 336322752 10814756 494314..494958 1 NC_015672.1 PFAM: Ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3, bacterial; COGs: COG0088 Ribosomal protein L4; InterPro IPR002136; KEGG: ddf:DEFDS_1771 50S ribosomal protein L4; PFAM: Ribosomal protein L4/L1e; SPTR: 50S ribosomal protein L4; 50S ribosomal protein L3 494958 10814756 Flexsi_0464 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L3 YP_004602719.1 494314 D 717231 CDS YP_004602720.1 336322753 10814757 494967..495593 1 NC_015672.1 PFAM: Ribosomal protein L4/L1 family; TIGRFAM: 50S ribosomal protein L4, bacterial/organelle; COGs: COG0089 Ribosomal protein L23; InterPro IPR013025; KEGG: cni:Calni_1505 LSU ribosomal protein l23p; PFAM: Ribosomal protein L25/L23; SPTR: 50S ribosomal protein L23; 50S ribosomal protein L4 495593 10814757 Flexsi_0465 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L4 YP_004602720.1 494967 D 717231 CDS YP_004602721.1 336322754 10814758 495590..495871 1 NC_015672.1 PFAM: Ribosomal protein L23; COGs: COG0090 Ribosomal protein L2; InterPro IPR005880:IPR002171; KEGG: ddf:DEFDS_1769 50S ribosomal protein L2; PFAM: Ribosomal protein L2; SPTR: 50S ribosomal protein L2; TIGRFAM: Ribosomal protein L2, bacterial-type; 50S ribosomal protein L25 495871 10814758 Flexsi_0466 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L25 YP_004602721.1 495590 D 717231 CDS YP_004602722.1 336322755 10814759 495884..496708 1 NC_015672.1 PFAM: Ribosomal Proteins L2, RNA binding domain; Ribosomal Proteins L2, C-terminal domain; TIGRFAM: ribosomal protein L2, bacterial/organellar; COGs: COG0185 Ribosomal protein S19; InterPro IPR005732:IPR002222; KEGG: dap:Dacet_0376 30S ribosomal protein S19; PFAM: Ribosomal protein S19/S15; SPTR: 30S ribosomal protein S19; TIGRFAM: Ribosomal protein S19, bacterial-type; 50S ribosomal protein L2 496708 10814759 Flexsi_0467 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L2 YP_004602722.1 495884 D 717231 CDS YP_004602723.1 336322756 10814760 496720..496998 1 NC_015672.1 PFAM: Ribosomal protein S19; TIGRFAM: ribosomal protein S19, bacterial/organelle; COGs: COG0091 Ribosomal protein L22; InterPro IPR005727:IPR001063; KEGG: ddf:DEFDS_1767 50S ribosomal protein L22; PFAM: Ribosomal protein L22/L17; SPTR: 50S ribosomal protein L22; TIGRFAM: Ribosomal protein L22, bacterial-type; 30S ribosomal protein S19 496998 10814760 Flexsi_0468 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S19 YP_004602723.1 496720 D 717231 CDS YP_004602724.1 336322757 10814761 497010..497342 1 NC_015672.1 PFAM: Ribosomal protein L22p/L17e; TIGRFAM: ribosomal protein L22, bacterial type; COGs: COG0092 Ribosomal protein S3; InterProIPR005704:IPR008282:IPR004044:IPR001351:IPR 004087; KEGG: ddf:DEFDS_1766 30S ribosomal protein S3; PFAM: Ribosomal protein S3, C-terminal; Ribosomal protein S3, N-terminal; K Homology, type 2; SMART: K Homology; SPTR: 30S ribosomal protein S3; TIGRFAM: Ribosomal protein S3, bacterial; 50S ribosomal protein L22 497342 10814761 Flexsi_0469 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L22 YP_004602724.1 497010 D 717231 CDS YP_004602725.1 336322758 10814762 497356..498015 1 NC_015672.1 PFAM: KH domain; Ribosomal protein S3, C-terminal domain; Ribosomal protein S3, N-terminal domain; TIGRFAM: ribosomal protein S3, bacterial type; COGs: COG0197 Ribosomal protein L16/L10E; HAMAP: Ribosomal protein L16; InterPro IPR000114:IPR016180; KEGG: ddf:DEFDS_1765 50S ribosomal protein L16; PFAM: Ribosomal protein L10e/L16; SPTR: 50S ribosomal protein L16; TIGRFAM: Ribosomal protein L16; 30S ribosomal protein S3 498015 10814762 Flexsi_0470 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S3 YP_004602725.1 497356 D 717231 CDS YP_004602726.1 336322759 10814763 498018..498446 1 NC_015672.1 PFAM: Ribosomal protein L16p/L10e; TIGRFAM: ribosomal protein L16, bacterial/organelle; InterPro IPR001854; KEGG: cni:Calni_1499 ribosomal protein L29; PFAM: Ribosomal protein L29; SPTR: Ribosomal protein L29; TIGRFAM: Ribosomal protein L29; 50S ribosomal protein L16 498446 10814763 Flexsi_0471 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L16 YP_004602726.1 498018 D 717231 CDS YP_004602727.1 336322760 10814764 498443..498637 1 NC_015672.1 PFAM: Ribosomal L29 protein; TIGRFAM: ribosomal protein L29; COGs: COG0186 Ribosomal protein S17; InterPro IPR019984:IPR000266; KEGG: dap:Dacet_0381 30S 30S ribosomal protein S17; PFAM: Ribosomal protein S17; SPTR: 30S ribosomal protein S17; TIGRFAM: Ribosomal protein S17, bacterial-type; 50S ribosomal protein L29 498637 10814764 Flexsi_0472 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L29 YP_004602727.1 498443 D 717231 CDS YP_004602728.1 336322761 10814765 498639..498914 1 NC_015672.1 PFAM: Ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; COGs: COG0093 Ribosomal protein L14; InterPro IPR005745:IPR000218; KEGG: cni:Calni_1497 LSU ribosomal protein l14p; PFAM: Ribosomal protein L14b/L23e; SPTR: 50S ribosomal protein L14; TIGRFAM: Ribosomal protein L14, bacterial-type; 30S ribosomal protein S17 498914 10814765 Flexsi_0473 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S17 YP_004602728.1 498639 D 717231 CDS YP_004602729.1 336322762 10814766 498934..499302 1 NC_015672.1 PFAM: Ribosomal protein L14p/L23e; TIGRFAM: ribosomal protein L14, bacterial/organelle; COGs: COG0198 Ribosomal protein L24; InterPro IPR003256; KEGG: ddf:DEFDS_1761 50S ribosomal protein L24; SPTR: 50S ribosomal protein L24; TIGRFAM: Ribosomal protein L24; 50S ribosomal protein L14 499302 10814766 Flexsi_0474 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L14 YP_004602729.1 498934 D 717231 CDS YP_004602730.1 336322763 10814767 499312..499644 1 NC_015672.1 TIGRFAM: ribosomal protein L24, bacterial/organelle; COGs: COG0094 Ribosomal protein L5; InterPro IPR002132; KEGG: ddf:DEFDS_1760 50S ribosomal protein L5; PFAM: Ribosomal protein L5; SPTR: 50S ribosomal protein L5; 50S ribosomal protein L24 499644 10814767 Flexsi_0475 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L24 YP_004602730.1 499312 D 717231 CDS YP_004602731.1 336322764 10814768 499659..500201 1 NC_015672.1 PFAM: ribosomal L5P family C-terminus; Ribosomal protein L5; COGs: COG0199 Ribosomal protein S14; InterPro IPR001209; KEGG: ddf:DEFDS_1759 30S ribosomal protein S14; PFAM: Ribosomal protein S14; SPTR: 30S ribosomal protein S14 type Z; 50S ribosomal protein L5 500201 10814768 Flexsi_0476 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L5 YP_004602731.1 499659 D 717231 CDS YP_004602732.1 336322765 10814769 500211..500396 1 NC_015672.1 PFAM: Ribosomal protein S14p/S29e; COGs: COG0096 Ribosomal protein S8; InterPro IPR000630; KEGG: ddf:DEFDS_1758 30S ribosomal protein S8; PFAM: Ribosomal protein S8; SPTR: 30S ribosomal protein S8; 30S ribosomal protein S14 500396 10814769 Flexsi_0477 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S14 YP_004602732.1 500211 D 717231 CDS YP_004602733.1 336322766 10814770 500438..500836 1 NC_015672.1 PFAM: Ribosomal protein S8; COGs: COG0097 Ribosomal protein L6P/L9E; InterPro IPR019906:IPR020040; KEGG: ddf:DEFDS_1757 50S ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain; SPTR: 50S ribosomal protein L6; TIGRFAM: Ribosomal protein L6, bacterial-type; 30S ribosomal protein S8 500836 10814770 Flexsi_0478 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S8 YP_004602733.1 500438 D 717231 CDS YP_004602734.1 336322767 10814771 500851..501387 1 NC_015672.1 PFAM: Ribosomal protein L6; TIGRFAM: ribosomal protein L6, bacterial type; COGs: COG0256 Ribosomal protein L18; InterPro IPR004389:IPR005484; KEGG: ddf:DEFDS_1756 50S ribosomal protein L18; PFAM: Ribosomal protein L18/L5; SPTR: 50S ribosomal protein L18; TIGRFAM: Ribosomal protein L18, bacterial; 50S ribosomal protein L6 501387 10814771 Flexsi_0479 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L6 YP_004602734.1 500851 D 717231 CDS YP_004602735.1 336322768 10814772 501399..501752 1 NC_015672.1 PFAM: Ribosomal L18p/L5e family; TIGRFAM: ribosomal protein L18, bacterial type; COGs: COG0098 Ribosomal protein S5; InterPro IPR005712:IPR013810:IPR005324; KEGG: ddf:DEFDS_1755 30S ribosomal protein S5; PFAM: Ribosomal protein S5, N-terminal; Ribosomal protein S5, C-terminal; SPTR: 30S ribosomal protein S5; TIGRFAM: Ribosomal protein S5, bacterial-type; 50S ribosomal protein L18 501752 10814772 Flexsi_0480 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L18 YP_004602735.1 501399 D 717231 CDS YP_004602736.1 336322769 10814773 501767..502255 1 NC_015672.1 PFAM: Ribosomal protein S5, N-terminal domain; Ribosomal protein S5, C-terminal domain; TIGRFAM: ribosomal protein S5, bacterial/organelle type; COGs: COG0200 Ribosomal protein L15; InterPro IPR005749:IPR001196; KEGG: dap:Dacet_0390 50S ribosomal protein L15; PFAM: Ribosomal protein L15; SPTR: 50S ribosomal protein L15; TIGRFAM: Ribosomal protein L15, bacterial-type; 30S ribosomal protein S5 502255 10814773 Flexsi_0481 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S5 YP_004602736.1 501767 D 717231 CDS YP_004602737.1 336322770 10814774 502268..502708 1 NC_015672.1 PFAM: Ribosomal protein L18e/L15; TIGRFAM: ribosomal protein L15, bacterial/organelle; COGs: COG0201 Preprotein translocase subunit SecY; InterPro IPR002208; KEGG: ddf:DEFDS_1753 preprotein translocase subunit Y; PFAM: SecY protein; SPTR: Preprotein translocase subunit Y; TIGRFAM: SecY protein; 50S ribosomal protein L15 502708 10814774 Flexsi_0482 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L15 YP_004602737.1 502268 D 717231 CDS YP_004602738.1 336322771 10814775 502771..504087 1 NC_015672.1 PFAM: eubacterial secY protein; TIGRFAM: preprotein translocase, SecY subunit; COGs: COG0563 Adenylate kinase and related kinase; HAMAP: Adenylate kinase; InterPro IPR006259:IPR000850:IPR007862; KEGG: ddf:DEFDS_1752 adenylate kinase; PFAM: Adenylate kinase; Adenylate kinase, zinc-finger lid region; SPTR: Adenylate kinase; TIGRFAM: Adenylate kinase, subfamily; preprotein translocase subunit SecY 504087 10814775 Flexsi_0483 Flexistipes sinusarabici DSM 4947 preprotein translocase subunit SecY YP_004602738.1 502771 D 717231 CDS YP_004602739.1 336322772 10814776 504084..504731 1 NC_015672.1 PFAM: Adenylate kinase, active site lid; Adenylate kinase; TIGRFAM: adenylate kinases; COGs: COG0024 Methionine aminopeptidase; InterPro IPR002467:IPR000994; KEGG: ddf:DEFDS_1751 methionine aminopeptidase; PFAM: Peptidase M24, structural domain; PRIAM: Methionyl aminopeptidase; SPTR: Methionine aminopeptidase; TIGRFAM: Peptidase M24A, methionine aminopeptidase, subfamily 1; adenylate kinase 504731 10814776 Flexsi_0484 Flexistipes sinusarabici DSM 4947 adenylate kinase YP_004602739.1 504084 D 717231 CDS YP_004602740.1 336322773 10814777 504735..505478 1 NC_015672.1 PFAM: Metallopeptidase family M24; TIGRFAM: methionine aminopeptidase, type I; COGs: COG0361 Translation initiation factor 1 (IF-1); HAMAP: Translation initiation factor IF-1; InterPro IPR004368:IPR006196; KEGG: has:Halsa_1899 translation initiation factor IF-1; PFAM: S1, IF1 type; SPTR: Translation initiation factor IF-1; TIGRFAM: Translation initiation factor IF-1; type I methionine aminopeptidase 505478 10814777 Flexsi_0485 Flexistipes sinusarabici DSM 4947 type I methionine aminopeptidase YP_004602740.1 504735 D 717231 CDS YP_004602741.1 336322774 10814778 505488..505706 1 NC_015672.1 PFAM: Translation initiation factor 1A / IF-1; TIGRFAM: translation initiation factor IF-1; HAMAP: Ribosomal protein L36; InterPro IPR000473; KEGG: ddf:DEFDS_1749 50S ribosomal protein L36; PFAM: Ribosomal protein L36; SPTR: 50S ribosomal protein L36; TIGRFAM: Ribosomal protein L36; translation initiation factor IF-1 505706 10814778 Flexsi_0486 Flexistipes sinusarabici DSM 4947 translation initiation factor IF-1 YP_004602741.1 505488 D 717231 CDS YP_004602742.1 336322775 10814779 505721..505834 1 NC_015672.1 PFAM: Ribosomal protein L36; TIGRFAM: ribosomal protein L36, bacterial type; COGs: COG0099 Ribosomal protein S13; InterPro IPR019980:IPR001892; KEGG: ddf:DEFDS_1748 30S ribosomal protein S13; PFAM: Ribosomal protein S13; SPTR: 30S ribosomal protein S13; TIGRFAM: Ribosomal protein S13, bacterial-type; 50S ribosomal protein L36 505834 10814779 Flexsi_0487 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L36 YP_004602742.1 505721 D 717231 CDS YP_004602743.1 336322776 10814780 505846..506214 1 NC_015672.1 PFAM: Ribosomal protein S13/S18; TIGRFAM: 30S ribosomal protein S13; COGs: COG0100 Ribosomal protein S11; InterPro IPR019981:IPR001971; KEGG: ddf:DEFDS_1747 30S ribosomal protein S11; PFAM: Ribosomal protein S11; SPTR: 30S ribosomal protein S11; TIGRFAM: Ribosomal protein S11, bacterial-type; 30S ribosomal protein S13 506214 10814780 Flexsi_0488 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S13 YP_004602743.1 505846 D 717231 CDS YP_004602744.1 336322777 10814781 506238..506618 1 NC_015672.1 PFAM: Ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; COGs: COG0522 Ribosomal protein S4 and related protein; InterPro IPR005709:IPR001912:IPR002942; KEGG: ddf:DEFDS_1746 30S ribosomal protein S4; PFAM: Ribosomal protein S4; RNA-binding S4; SMART: RNA-binding S4; SPTR: 30S ribosomal protein S4; TIGRFAM: Ribosomal protein S4, bacterial-type; 30S ribosomal protein S11 506618 10814781 Flexsi_0489 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S11 YP_004602744.1 506238 D 717231 CDS YP_004602745.1 336322778 10814782 506634..507260 1 NC_015672.1 PFAM: Ribosomal protein S4/S9 N-terminal domain; S4 domain; TIGRFAM: ribosomal protein S4, bacterial/organelle type; COGs: COG0202 DNA-directed RNA polymerase alpha subunit/40 kD subunit; HAMAP: DNA-directed RNA polymerase, alpha subunit; InterProIPR011773:IPR011261:IPR011262:IPR011260:IPR 011263; KEGG: dap:Dacet_0399 DNA-directed RNA polymerase, alpha subunit; PFAM: DNA-directed RNA polymerase, insert; DNA-directed RNA polymerase, dimerisation; RNA polymerase, alpha subunit, C-terminal; SMART: DNA-directed RNA polymerase, RpoA/D/Rpb3-type; SPTR: DNA-directed RNA polymerase subunit alpha; TIGRFAM: DNA-directed RNA polymerase, alpha subunit; 30S ribosomal protein S4 507260 10814782 Flexsi_0490 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S4 YP_004602745.1 506634 D 717231 CDS YP_004602746.1 336322779 10814783 507293..508300 1 NC_015672.1 PFAM: RNA polymerase Rpb3/Rpb11 dimerisation domain; RNA polymerase Rpb3/RpoA insert domain; Bacterial RNA polymerase, alpha chain C terminal domain; TIGRFAM: DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type; COGs: COG0203 Ribosomal protein L17; HAMAP: 50S ribosomal protein L17; InterPro IPR000456; KEGG: ddf:DEFDS_1744 50S ribosomal protein L17; PFAM: Ribosomal protein L17; SPTR: 50S ribosomal protein L17; TIGRFAM: Ribosomal protein L17; DNA-directed RNA polymerase subunit alpha 508300 10814783 Flexsi_0491 Flexistipes sinusarabici DSM 4947 DNA-directed RNA polymerase subunit alpha YP_004602746.1 507293 D 717231 CDS YP_004602747.1 336322780 10814784 508301..508711 1 NC_015672.1 PFAM: Ribosomal protein L17; TIGRFAM: ribosomal protein L17; COGs: COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems ATPase components; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1743 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; 50S ribosomal protein L17 508711 10814784 Flexsi_0492 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L17 YP_004602747.1 508301 D 717231 CDS YP_004602748.1 336322781 10814785 508718..509305 1 NC_015672.1 PFAM: ABC transporter; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1742 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; ABC transporter-like protein 509305 10814785 Flexsi_0493 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004602748.1 508718 D 717231 CDS YP_004602749.1 336322782 10814786 509313..509879 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR001303; KEGG: cni:Calni_1478 class II aldolase/adducin family protein; PFAM: Class II aldolase/adducin, N-terminal; SPTR: Class II aldolase/adducin family protein; ABC transporter-like protein 509879 10814786 Flexsi_0494 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004602749.1 509313 D 717231 CDS YP_004602750.1 336322783 10814787 509889..510443 1 NC_015672.1 PFAM: Class II Aldolase and Adducin N-terminal domain; COGs: COG0488 ATPase components of ABC transporter with duplicated ATPase domains; InterPro IPR003439:IPR003593; KEGG: cni:Calni_1476 abc transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; class II aldolase/adducin family protein 510443 10814787 Flexsi_0495 Flexistipes sinusarabici DSM 4947 class II aldolase/adducin family protein YP_004602750.1 509889 D 717231 CDS YP_004602751.1 336322784 10814788 510447..512276 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0001 Glutamate-1-semialdehyde aminotransferase; HAMAP: Glutamate-1-semialdehyde 2,1-aminomutase; InterPro IPR004639:IPR005814; KEGG: ddf:DEFDS_1739 glutamate-1-semialdehyde 2,1-aminomutase; PFAM: Aminotransferase class-III; PRIAM: Glutamate-1-semialdehyde 2,1-aminomutase; SPTR: Glutamate-1-semialdehyde 2,1-aminomutase; TIGRFAM: Tetrapyrrole biosynthesis, glutamate-1-semialdehyde aminotransferase; ABC transporter-like protein 512276 10814788 Flexsi_0496 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004602751.1 510447 D 717231 CDS YP_004602752.1 336322785 10814789 512273..513538 1 NC_015672.1 PFAM: Aminotransferase class-III; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; KEGG: ddf:DEFDS_1738 hypothetical protein; SPTR: Putative uncharacterized protein; glutamate-1-semialdehyde 2,1-aminomutase 513538 10814789 Flexsi_0497 Flexistipes sinusarabici DSM 4947 glutamate-1-semialdehyde 2,1-aminomutase YP_004602752.1 512273 D 717231 CDS YP_004602753.1 336322786 10814790 513548..513877 1 NC_015672.1 KEGG: ddf:DEFDS_1737 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 513877 10814790 Flexsi_0498 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602753.1 513548 D 717231 CDS YP_004602754.1 336322787 10814791 513897..514145 1 NC_015672.1 PFAM: Putative F0F1-ATPase subunit (ATPase_gene1); InterPro IPR008413; KEGG: cni:Calni_1473 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 514145 10814791 Flexsi_0499 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602754.1 513897 D 717231 CDS YP_004602755.1 336322788 10814792 514114..514497 1 NC_015672.1 PFAM: ATP synthase I chain; COGs: COG0356 F0F1-type ATP synthase subunit a; HAMAP: ATP synthase subunit a; InterPro IPR000568; KEGG: ddf:DEFDS_1735 F0F1-type ATP synthase A subunit; PFAM: ATPase, F0 complex, subunit A; SPTR: ATP synthase subunit a; TIGRFAM: ATPase, F0 complex, subunit A; hypothetical protein 514497 10814792 Flexsi_0500 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602755.1 514114 D 717231 CDS YP_004602756.1 336322789 10814793 514481..515152 1 NC_015672.1 PFAM: ATP synthase A chain; TIGRFAM: ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes); HAMAP: ATPase, F0 complex, subunit C; InterPro IPR000454:IPR005953:IPR002379; KEGG: cni:Calni_1471 ATP synthase f0 subcomplex C subunit; PFAM: ATPase, F0/V0 complex, subunit C; SPTR: ATP synthase F0 subcomplex C subunit; TIGRFAM: ATPase, F0 complex, subunit C, bacterial/chloroplast; ATP synthase subunit a 515152 10814793 Flexsi_0501 Flexistipes sinusarabici DSM 4947 ATP synthase subunit a YP_004602756.1 514481 D 717231 CDS YP_004602757.1 336322790 10814794 515180..515497 1 NC_015672.1 PFAM: ATP synthase subunit C; TIGRFAM: ATP synthase, F0 subunit c; KEGG: ddf:DEFDS_1733 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; ATP synthase subunit c 515497 10814794 Flexsi_0502 Flexistipes sinusarabici DSM 4947 ATP synthase subunit c YP_004602757.1 515180 D 717231 CDS YP_004602758.1 336322791 10814795 515546..517084 1 NC_015672.1 PFAM: NapC/NirT cytochrome c family, N-terminal region; COGs: COG0705 membrane protein; InterPro IPR002610; KEGG: dap:Dacet_0423 rhomboid family protein; PFAM: Peptidase S54, rhomboid; SPTR: Rhomboid family protein; multiheme C-type cytochrome 517084 10814795 Flexsi_0503 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004602758.1 515546 D 717231 CDS YP_004602759.1 336322792 10814796 517172..517846 1 NC_015672.1 PFAM: Rhomboid family; COGs: COG0298 Hydrogenase maturation factor; InterPro IPR001109; KEGG: ddf:DEFDS_1732 hydrogenase expression/formation protein HupF/HypC; PFAM: Hydrogenase expression/formation protein, HupF/HypC; SPTR: Hydrogenase expression/formation protein HupF/HypC; TIGRFAM: Hydrogenase expression/formation protein, HupF/HypC; rhomboid family protein 517846 10814796 Flexsi_0504 Flexistipes sinusarabici DSM 4947 rhomboid family protein YP_004602759.1 517172 D 717231 CDS YP_004602760.1 336322793 10814797 517850..518077 1 NC_015672.1 PFAM: HupF/HypC family; TIGRFAM: hydrogenase assembly chaperone HypC/HupF; COGs: COG0409 Hydrogenase maturation factor; InterPro IPR002780; KEGG: dap:Dacet_0421 hydrogenase formation HypD protein; PFAM: Hydrogenase formation HypD protein; SPTR: Hydrogenase formation HypD protein; TIGRFAM: Hydrogenase formation HypD protein; hydrogenase assembly chaperone HypC/HupF 518077 10814797 Flexsi_0505 Flexistipes sinusarabici DSM 4947 hydrogenase assembly chaperone HypC/HupF YP_004602760.1 517850 D 717231 CDS YP_004602761.1 336322794 10814798 518061..519146 1 NC_015672.1 PFAM: Hydrogenase formation hypA family; TIGRFAM: hydrogenase expression/formation protein HypD; COGs: COG0309 Hydrogenase maturation factor; InterPro IPR011854:IPR000728:IPR010918; KEGG: cni:Calni_1467 hydrogenase expression/formation protein HypE; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Hydrogenase expression/formation protein HypE; TIGRFAM: Hydrogenase expression/formation protein HypE; hydrogenase expression/formation protein HypD 519146 10814798 Flexsi_0506 Flexistipes sinusarabici DSM 4947 hydrogenase expression/formation protein HypD YP_004602761.1 518061 D 717231 CDS YP_004602762.1 336322795 10814799 519174..520166 1 NC_015672.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: hydrogenase expression/formation protein HypE; KEGG: cni:Calni_1466 hypothetical protein; SPTR: Putative uncharacterized protein; hydrogenase expression/formation protein HypE 520166 10814799 Flexsi_0507 Flexistipes sinusarabici DSM 4947 hydrogenase expression/formation protein HypE YP_004602762.1 519174 D 717231 CDS YP_004602763.1 336322796 10814800 520123..520383 1 NC_015672.1 PFAM: Quinohemoprotein amine dehydrogenase A, alpha subunit, haem binding; COGs: COG0139 Phosphoribosyl-AMP cyclohydrolase; HAMAP: Phosphoribosyl-AMP cyclohydrolase; InterPro IPR002496; KEGG: ddf:DEFDS_1729 phosphoribosyl-AMP cyclohydrolase; PFAM: Phosphoribosyl-AMP cyclohydrolase; PRIAM: Phosphoribosyl-AMP cyclohydrolase; SPTR: Phosphoribosyl-AMP cyclohydrolase; hypothetical protein 520383 10814800 Flexsi_0508 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602763.1 520123 D 717231 CDS YP_004602764.1 336322797 10814801 520449..520760 1 NC_015672.1 PFAM: Phosphoribosyl-AMP cyclohydrolase; COGs: COG4972 Tfp pilus assembly protein ATPase PilM; InterPro IPR005883; KEGG: ddf:DEFDS_1728 type IV pilus assembly protein PilM; SPTR: Type IV pilus assembly protein PilM; TIGRFAM: Type IV pilus assembly protein PilM; phosphoribosyl-AMP cyclohydrolase 520760 10814801 Flexsi_0509 Flexistipes sinusarabici DSM 4947 phosphoribosyl-AMP cyclohydrolase YP_004602764.1 520449 D 717231 CDS YP_004602765.1 336322798 10814802 520769..521809 1 NC_015672.1 PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM; COGs: COG3166 Tfp pilus assembly protein PilN; InterPro IPR007813; KEGG: ddf:DEFDS_1727 hypothetical protein; PFAM: Fimbrial assembly; SPTR: Putative uncharacterized protein; type IV pilus assembly protein PilM 521809 10814802 Flexsi_0510 Flexistipes sinusarabici DSM 4947 type IV pilus assembly protein PilM YP_004602765.1 520769 D 717231 CDS YP_004602766.1 336322799 10814803 521806..522351 1 NC_015672.1 PFAM: Fimbrial assembly protein (PilN); KEGG: ddf:DEFDS_1726 hypothetical protein; SPTR: Putative uncharacterized protein; fimbrial assembly family protein 522351 10814803 Flexsi_0511 Flexistipes sinusarabici DSM 4947 fimbrial assembly family protein YP_004602766.1 521806 D 717231 CDS YP_004602767.1 336322800 10814804 522354..522923 1 NC_015672.1 PFAM: Pilus assembly protein, PilO; KEGG: cni:Calni_1461 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 522923 10814804 Flexsi_0512 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602767.1 522354 D 717231 CDS YP_004602768.1 336322801 10814805 522923..523513 1 NC_015672.1 PFAM: Pilus assembly protein, PilP; COGs: COG4796 Type II secretory pathway component HofQ; InterPro IPR013355:IPR005644:IPR004846; KEGG: ddf:DEFDS_1724 hypothetical protein; PFAM: Type II/III secretion system; NolW-like; SPTR: Putative uncharacterized protein; TIGRFAM: Type IV pilus secretin PilQ; hypothetical protein 523513 10814805 Flexsi_0513 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602768.1 522923 D 717231 CDS YP_004602769.1 336322802 10814806 523510..525978 1 NC_015672.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: type IV pilus secretin (or competence protein) PilQ; type IV pilus secretin PilQ 525978 10814806 Flexsi_0514 Flexistipes sinusarabici DSM 4947 type IV pilus secretin PilQ YP_004602769.1 523510 D 717231 CDS YP_004602770.1 336322803 10814807 525999..526589 1 NC_015672.1 COGs: COG0763 Lipid A disaccharide synthetase; InterPro IPR003835; KEGG: ddf:DEFDS_1723 lipid A disaccharide synthetase; PFAM: Glycosyl transferase, family 19; PRIAM: Lipid-A-disaccharide synthase; SPTR: Lipid A disaccharide synthetase; TIGRFAM: Glycosyl transferase, family 19; hypothetical protein 526589 10814807 Flexsi_0515 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602770.1 525999 D 717231 CDS YP_004602771.1 336322804 10814808 526590..527690 1 NC_015672.1 PFAM: Lipid-A-disaccharide synthetase; TIGRFAM: lipid-A-disaccharide synthase; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR002198; KEGG: hch:HCH_00126 short-chain alcohol dehydrogenase-like protein; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-oxoacyl-[acyl-carrier-protein] reductase; SPTR: Short-chain alcohol dehydrogenase-like protein; lipid-A-disaccharide synthase 527690 10814808 Flexsi_0516 Flexistipes sinusarabici DSM 4947 lipid-A-disaccharide synthase YP_004602771.1 526590 D 717231 CDS YP_004602772.1 336322805 10814809 528006..528797 1 NC_015672.1 PFAM: short chain dehydrogenase; COGs: COG1690 conserved hypothetical protein; InterPro IPR001233; KEGG: ddf:DEFDS_1236 hypothetical protein; PFAM: Uncharacterised protein family UPF0027; SPTR: Putative uncharacterized protein; 3-oxoacyl-(acyl-carrier-protein) reductase 528797 10814809 Flexsi_0517 Flexistipes sinusarabici DSM 4947 3-oxoacyl-(acyl-carrier-protein) reductase YP_004602772.1 528006 D 717231 CDS YP_004602773.1 336322806 10814810 528825..530261 1 NC_015672.1 PFAM: Uncharacterized protein family UPF0027; KEGG: cni:Calni_2043 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 530261 10814810 Flexsi_0518 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602773.1 528825 D 717231 CDS YP_004602774.1 336322807 10814811 530264..530563 1 NC_015672.1 COGs: COG1775 Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit BcrC/BadD/HgdB; InterPro IPR010327; KEGG: cni:Calni_2042 2-hydroxyglutaryl-CoA dehydratase D-component; PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; SPTR: 2-hydroxyglutaryl-CoA dehydratase D-component; hypothetical protein 530563 10814811 Flexsi_0519 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602774.1 530264 D 717231 CDS YP_004602775.1 336322808 10814812 530560..531549 1 NC_015672.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase, D-component; COGs: COG1924 Activator of 2-hydroxyglutaryl-CoA dehydratase (HSP70-class ATPase domain); InterPro IPR008275:IPR002731; KEGG: cni:Calni_2041 CoA-substrate-specific enzyme activase; PFAM: ATPase, BadF/BadG/BcrA/BcrD type; SPTR: CoA-substrate-specific enzyme activase; TIGRFAM: CoA enzyme activase; 2-hydroxyglutaryl-CoA dehydratase subunit D 531549 10814812 Flexsi_0520 Flexistipes sinusarabici DSM 4947 2-hydroxyglutaryl-CoA dehydratase subunit D YP_004602775.1 530560 D 717231 CDS YP_004602776.1 336322809 10814813 531546..532289 1 NC_015672.1 PFAM: BadF/BadG/BcrA/BcrD ATPase family; TIGRFAM: CoA-substrate-specific enzyme activase, putative; COGs: COG2033 Desulfoferrodoxin; InterPro IPR002742; KEGG: cni:Calni_1945 superoxide reductase; PFAM: Desulfoferrodoxin, ferrous iron-binding region; PRIAM: Superoxide reductase; SPTR: Superoxide reductase; TIGRFAM: Desulfoferrodoxin, ferrous iron-binding region; CoA-substrate-specific enzyme activase 532289 10814813 Flexsi_0521 Flexistipes sinusarabici DSM 4947 CoA-substrate-specific enzyme activase YP_004602776.1 531546 D 717231 CDS YP_004602777.1 336322810 10814814 complement(532321..532710) 1 NC_015672.1 PFAM: Desulfoferrodoxin; TIGRFAM: desulfoferrodoxin ferrous iron-binding domain; manually curated; desulfoferrodoxin ferrous iron-binding region 532710 10814814 Flexsi_0522 Flexistipes sinusarabici DSM 4947 desulfoferrodoxin ferrous iron-binding region YP_004602777.1 532321 R 717231 CDS YP_004602778.1 336322811 10814816 complement(534225..534914) 1 NC_015672.1 PFAM: Protein of unknown function (DUF554); COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ddf:DEFDS_1842 phospholipase D/transphosphatidylase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Phospholipase D/transphosphatidylase; hypothetical protein 534914 10814816 Flexsi_0524 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602778.1 534225 R 717231 CDS YP_004602779.1 336322812 10814817 complement(534911..535486) 1 NC_015672.1 PFAM: Polyphosphate kinase; Phospholipase D Active site motif; COGs: COG0218 GTPase; HAMAP: GTP-binding protein, ribosome biogenesis, YsxC; InterPro IPR019987:IPR005225:IPR002917; KEGG: dap:Dacet_0301 ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein, HSR1-related; SPTR: Ribosome biogenesis GTP-binding protein YsxC; TIGRFAM: GTP-binding protein, ribosome biogenesis, YsxC; Small GTP-binding protein; phospholipase D/transphosphatidylase 535486 10814817 Flexsi_0525 Flexistipes sinusarabici DSM 4947 phospholipase D/transphosphatidylase YP_004602779.1 534911 R 717231 CDS YP_004602780.1 336322813 10814818 complement(535483..536076) 1 NC_015672.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC/EngB; small GTP-binding protein domain; COGs: COG2404 phosphohydrolase (DHH superfamily); InterPro IPR003156; KEGG: cni:Calni_0881 phosphoesterase DHHA1; PFAM: Phosphoesterase, DHHA1; SPTR: Phosphoesterase DHHA1; GTP-binding protein engB 536076 10814818 Flexsi_0526 Flexistipes sinusarabici DSM 4947 GTP-binding protein engB YP_004602780.1 535483 R 717231 CDS YP_004602781.1 336322814 10814819 complement(536073..536918) 1 NC_015672.1 PFAM: DHH family; DHHA1 domain; This gene is disrupted by insertion of repetitive element; manually curated; phosphoesterase DHHA1 536918 10814819 Flexsi_0527 Flexistipes sinusarabici DSM 4947 phosphoesterase DHHA1 YP_004602781.1 536073 R 717231 CDS YP_004602782.1 336322815 10814822 540094..541503 1 NC_015672.1 PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153; KEGG: pmx:PERMA_0591 hypothetical protein; PFAM: Cation/H+ exchanger; SPTR: Putative uncharacterized protein; TrkA-C domain-containing protein 541503 10814822 Flexsi_0530 Flexistipes sinusarabici DSM 4947 TrkA-C domain-containing protein YP_004602782.1 540094 D 717231 CDS YP_004602783.1 336322816 10814823 541496..542659 1 NC_015672.1 PFAM: Sodium/hydrogen exchanger family; COGs: COG4799 Acetyl-CoA carboxylase carboxyltransferase component (subunits alpha and beta); InterPro IPR000022; KEGG: cni:Calni_0564 propionyl-CoA carboxylase carboxyltransferase subunit; PFAM: Carboxyl transferase; PRIAM: Propionyl-CoA carboxylase; SPTR: Propionyl-CoA carboxylase carboxyltransferase subunit; sodium/hydrogen exchanger 542659 10814823 Flexsi_0531 Flexistipes sinusarabici DSM 4947 sodium/hydrogen exchanger YP_004602783.1 541496 D 717231 CDS YP_004602784.1 336322817 10814824 542952..544496 1 NC_015672.1 PFAM: Carboxyl transferase domain; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481:IPR005479:IPR005482; KEGG: cni:Calni_0565 biotin carboxylase; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SPTR: Biotin carboxylase; propionyl-CoA carboxylase 544496 10814824 Flexsi_0532 Flexistipes sinusarabici DSM 4947 propionyl-CoA carboxylase YP_004602784.1 542952 D 717231 CDS YP_004602785.1 336322818 10814825 544508..546025 1 NC_015672.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR000089; KEGG: ddf:DEFDS_1226 biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Biotin carboxyl carrier protein; pyruvate carboxylase 546025 10814825 Flexsi_0533 Flexistipes sinusarabici DSM 4947 pyruvate carboxylase YP_004602785.1 544508 D 717231 CDS YP_004602786.1 336322819 10814826 546038..546571 1 NC_015672.1 PFAM: Biotin-requiring enzyme; COGs: COG1884 Methylmalonyl-CoA mutase N-terminal domain/subunit; InterPro IPR006098:IPR006159:IPR006099:IPR006158; KEGG: cni:Calni_0567 methylmalonyl-CoA mutase; PFAM: Methylmalonyl-CoA mutase, alpha/beta chain, catalytic; Cobalamin (vitamin B12)-binding; PRIAM: Methylmalonyl-CoA mutase; SPTR: Methylmalonyl-CoA mutase; TIGRFAM: Methylmalonyl-CoA mutase, alpha chain, catalytic; Methylmalonyl-CoA mutase, C-terminal; biotin/lipoyl attachment domain-containing protein 546571 10814826 Flexsi_0534 Flexistipes sinusarabici DSM 4947 biotin/lipoyl attachment domain-containing protein YP_004602786.1 546038 D 717231 CDS YP_004602787.1 336322820 10814827 546647..548791 1 NC_015672.1 PFAM: Methylmalonyl-CoA mutase; B12 binding domain; TIGRFAM: methylmalonyl-CoA mutase N-terminal domain; methylmalonyl-CoA mutase C-terminal domain; COGs: COG1703 Putative periplasmic protein kinase ArgK and related GTPase of G3E family; InterPro IPR005129; KEGG: dap:Dacet_1929 LAO/AO transport system ATPase; PFAM: ArgK protein; SPTR: LAO/AO transport system ATPase; TIGRFAM: ArgK protein; methylmalonyl-CoA mutase large subunit 548791 10814827 Flexsi_0535 Flexistipes sinusarabici DSM 4947 methylmalonyl-CoA mutase large subunit YP_004602787.1 546647 D 717231 CDS YP_004602788.1 336322821 10814828 548797..549774 1 NC_015672.1 PFAM: ArgK protein; TIGRFAM: LAO/AO transport system ATPase; COGs: COG2172 Anti-sigma regulatory factor (Ser/Thr protein kinase); InterPro IPR003594; KEGG: cni:Calni_0067 anti-sigma regulatory factor, serine/threonine protein kinase; PFAM: ATP-binding region, ATPase-like; SPTR: Putative anti-sigma regulatory factor, serine/threonine protein kinase; LAO/AO transport system ATPase 549774 10814828 Flexsi_0536 Flexistipes sinusarabici DSM 4947 LAO/AO transport system ATPase YP_004602788.1 548797 D 717231 CDS YP_004602789.1 336322822 10814829 complement(550025..550459) 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; InterPro IPR003658:IPR002645; KEGG: cni:Calni_0188 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; putative anti-sigma regulatory factor 550459 10814829 Flexsi_0537 Flexistipes sinusarabici DSM 4947 putative anti-sigma regulatory factor YP_004602789.1 550025 R 717231 CDS YP_004602790.1 336322823 10814830 complement(550459..550788) 1 NC_015672.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1227 Inorganic pyrophosphatase/exopolyphosphatase; InterPro IPR000644:IPR004097; KEGG: cni:Calni_0065 inorganic diphosphatase; PFAM: Cystathionine beta-synthase, core; DHHA2; PRIAM: Inorganic diphosphatase; SPTR: Inorganic diphosphatase; anti-anti-sigma factor 550788 10814830 Flexsi_0538 Flexistipes sinusarabici DSM 4947 anti-anti-sigma factor YP_004602790.1 550459 R 717231 CDS YP_004602791.1 336322824 10814831 551279..552922 1 NC_015672.1 PFAM: DHH family; DRTGG domain; DHHA2 domain; CBS domain; COGs: COG0196 FAD synthase; InterPro IPR002606:IPR015864:IPR015865; KEGG: ddf:DEFDS_1953 riboflavin biosynthesis regulatory protein RibF; PFAM: FAD synthetase; Riboflavin kinase; PRIAM: FAD synthetase., Riboflavin kinase; SPTR: Riboflavin biosynthesis regulatory protein RibF; TIGRFAM: Riboflavin kinase/FAD synthetase; inorganic diphosphatase 552922 10814831 Flexsi_0539 Flexistipes sinusarabici DSM 4947 inorganic diphosphatase YP_004602791.1 551279 D 717231 CDS YP_004602792.1 336322825 10814832 552962..553888 1 NC_015672.1 PFAM: Riboflavin kinase; FAD synthetase; TIGRFAM: riboflavin kinase/FMN adenylyltransferase; COGs: COG0621 2-methylthioadenine synthetase; HAMAP: Ribosomal protein S12 methylthiotransferase RimO; InterProIPR005840:IPR005839:IPR013848:IPR007197:IPR 006638; KEGG: cni:Calni_0476 SSU ribosomal protein s12p methylthiotransferase; PFAM: Methylthiotransferase, N-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: SSU ribosomal protein S12P methylthiotransferase; TIGRFAM: Ribosomal protein S12 methylthiotransferase RimO; Methylthiotransferase; riboflavin biosynthesis protein RibF 553888 10814832 Flexsi_0540 Flexistipes sinusarabici DSM 4947 riboflavin biosynthesis protein RibF YP_004602792.1 552962 D 717231 CDS YP_004602793.1 336322826 10814833 553885..555189 1 NC_015672.1 PFAM: Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: ribosomal protein S12 methylthiotransferase RimO; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG4105 DNA uptake lipoprotein; InterPro IPR017689:IPR019734; KEGG: cni:Calni_0477 outer membrane assembly lipoprotein yfio; SPTR: Outer membrane assembly lipoprotein YfiO; TIGRFAM: Outer membrane assembly lipoprotein YfiO; 30S ribosomal protein S12 methylthiotransferase rimO 555189 10814833 Flexsi_0541 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S12 methylthiotransferase rimO YP_004602793.1 553885 D 717231 CDS YP_004602794.1 336322827 10814834 555202..555957 1 NC_015672.1 TIGRFAM: outer membrane assembly lipoprotein YfiO; COGs: COG4783 Putative Zn-dependent protease contains TPR repeats; InterPro IPR001440:IPR013105:IPR019734; KEGG: ddf:DEFDS_1956 tetratricopeptide repeat protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide repeat protein; outer membrane assembly lipoprotein YfiO 555957 10814834 Flexsi_0542 Flexistipes sinusarabici DSM 4947 outer membrane assembly lipoprotein YfiO YP_004602794.1 555202 D 717231 CDS YP_004602795.1 336322828 10814835 556202..556909 1 NC_015672.1 PFAM: Tetratricopeptide repeat; COGs: COG0172 Seryl-tRNA synthetase; HAMAP: Seryl-tRNA synthetase; InterPro IPR002317:IPR015866:IPR002314; KEGG: ddf:DEFDS_1957 seryl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Seryl-tRNA synthetase, class IIa, N-terminal; PRIAM: Serine--tRNA ligase; SPTR: Seryl-tRNA synthetase; TIGRFAM: Seryl-tRNA synthetase, class IIa; hypothetical protein 556909 10814835 Flexsi_0543 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602795.1 556202 D 717231 CDS YP_004602796.1 336322829 10814836 556910..558178 1 NC_015672.1 PFAM: Seryl-tRNA synthetase N-terminal domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; COGs: COG0313 methyltransferase; InterPro IPR000878; KEGG: ddf:DEFDS_1958 methyltransferase; PFAM: Tetrapyrrole methylase; SPTR: Methyltransferase; seryl-tRNA synthetase 558178 10814836 Flexsi_0544 Flexistipes sinusarabici DSM 4947 seryl-tRNA synthetase YP_004602796.1 556910 D 717231 CDS YP_004602797.1 336322830 10814837 558182..558853 1 NC_015672.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; COGs: COG2379 Putative glycerate kinase; InterPro IPR007835; KEGG: pmx:PERMA_1579 putative hydroxypyruvate reductase; PFAM: MOFRL; PRIAM: Glycerate kinase; SPTR: Putative hydroxypyruvate reductase; uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase 558853 10814837 Flexsi_0545 Flexistipes sinusarabici DSM 4947 uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase YP_004602797.1 558182 D 717231 CDS YP_004602798.1 336322831 10814838 558850..560118 1 NC_015672.1 PFAM: MOFRL family; COGs: COG3238 conserved hypothetical protein; InterPro IPR006750; KEGG: ddf:DEFDS_1960 hypothetical protein; PFAM: Protein of unknown function DUF606; SPTR: Putative uncharacterized protein; glycerate kinase 560118 10814838 Flexsi_0546 Flexistipes sinusarabici DSM 4947 glycerate kinase YP_004602798.1 558850 D 717231 CDS YP_004602799.1 336322832 10814839 560120..560560 1 NC_015672.1 PFAM: Protein of unknown function, DUF606; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: cni:Calni_1539 transcriptional regulator, ArsR family; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, ArsR family; hypothetical protein 560560 10814839 Flexsi_0547 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602799.1 560120 D 717231 CDS YP_004602800.1 336322833 10814840 560630..560926 1 NC_015672.1 PFAM: Bacterial regulatory protein, arsR family; InterPro IPR001845; KEGG: ddf:DEFDS_1673 AsrR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Transcriptional regulator, AsrR family; ArsR family transcriptional regulator 560926 10814840 Flexsi_0548 Flexistipes sinusarabici DSM 4947 ArsR family transcriptional regulator YP_004602800.1 560630 D 717231 CDS YP_004602801.1 336322834 10814841 560933..561265 1 NC_015672.1 PFAM: Bacterial regulatory protein, arsR family; manually curated; regulatory protein ArsR 561265 10814841 Flexsi_0549 Flexistipes sinusarabici DSM 4947 regulatory protein ArsR YP_004602801.1 560933 D 717231 CDS YP_004602802.1 336322835 10814845 564624..564923 1 NC_015672.1 PFAM: Enterobacterial TraT complement resistance protein; KEGG: mtt:Ftrac_2644 UspA domain-containing protein; SPTR: UspA domain-containing protein; hypothetical protein 564923 10814845 Flexsi_0553 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602802.1 564624 D 717231 CDS YP_004602803.1 336322836 10814846 complement(565098..566006) 1 NC_015672.1 PFAM: Universal stress protein family; COGs: COG1292 Choline-glycine betaine transporter; InterPro IPR000060; KEGG: mtt:Ftrac_2905 choline/carnitine/betaine transporter; PFAM: BCCT transporter; SPTR: Choline/carnitine/betaine transporter; TIGRFAM: BCCT transporter; hypothetical protein 566006 10814846 Flexsi_0554 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602803.1 565098 R 717231 CDS YP_004602804.1 336322837 10814847 complement(566018..567649) 1 NC_015672.1 PFAM: BCCT family transporter; TIGRFAM: choline/carnitine/betaine transport; COGs: COG2703 Hemerythrin; InterPro IPR012827:IPR012312; KEGG: cni:Calni_0209 hemerythrin-like metal-binding protein; PFAM: Haemerythrin/HHE cation-binding motif; SPTR: Hemerythrin-like metal-binding protein; TIGRFAM: Haemerythrin-like, metal-binding; choline/carnitine/betaine transporter 567649 10814847 Flexsi_0555 Flexistipes sinusarabici DSM 4947 choline/carnitine/betaine transporter YP_004602804.1 566018 R 717231 CDS YP_004602805.1 336322838 10814848 567846..568640 1 NC_015672.1 PFAM: Hemerythrin HHE cation binding domain; TIGRFAM: hemerythrin-like metal-binding domain; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: dap:Dacet_2548 cytochrome-c3 hydrogenase; PFAM: Nickel-dependent hydrogenase, large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Cytochrome-c3 hydrogenase; hemerythrin-like metal-binding protein 568640 10814848 Flexsi_0556 Flexistipes sinusarabici DSM 4947 hemerythrin-like metal-binding protein YP_004602805.1 567846 D 717231 CDS YP_004602806.1 336322839 10814849 569016..570452 1 NC_015672.1 PFAM: Nickel-dependent hydrogenase; COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR001821:IPR006311:IPR006137; KEGG: dap:Dacet_2547 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Hydrogenase (NiFe) small subunit HydA; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; cytochrome-c3 hydrogenase 570452 10814849 Flexsi_0557 Flexistipes sinusarabici DSM 4947 cytochrome-c3 hydrogenase YP_004602806.1 569016 D 717231 CDS YP_004602807.1 336322840 10814850 570460..571425 1 NC_015672.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); COGs: COG5001 signal transduction protein containing a membrane domain an EAL and a GGDEF domain; InterProIPR000014:IPR000160:IPR013767:IPR001633:IPR 001610; KEGG: dbr:Deba_0792 diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s); PFAM: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS fold; SMART: Diguanylate phosphodiesterase, predicted; Diguanylate cyclase, predicted; PAS; PAC motif; SPTR: Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S); TIGRFAM: Diguanylate cyclase, predicted; PAS; hydrogenase (NiFe) small subunit HydA 571425 10814850 Flexsi_0558 Flexistipes sinusarabici DSM 4947 hydrogenase (NiFe) small subunit HydA YP_004602807.1 570460 D 717231 CDS YP_004602808.1 336322841 10814851 571425..574088 1 NC_015672.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: PAS domain S-box; diguanylate cyclase (GGDEF) domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase 574088 10814851 Flexsi_0559 Flexistipes sinusarabici DSM 4947 PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase YP_004602808.1 571425 D 717231 CDS YP_004602809.1 336322842 10814852 574601..575650 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 575650 10814852 Flexsi_0560 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602809.1 574601 D 717231 CDS YP_004602810.1 336322843 10814853 576020..577069 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 577069 10814853 Flexsi_0561 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602810.1 576020 D 717231 CDS YP_004602811.1 336322844 10814854 complement(577539..578858) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR000014:IPR001638:IPR013767:IPR013656:IPR 003661:IPR003594:IPR001789:IPR001610; KEGG: gur:Gura_2743 PAS/PAC sensor hybrid histidine kinase; PFAM: Extracellular solute-binding protein, family 3; PAS fold; PAS fold-4; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SMART: Extracellular solute-binding protein, family 3; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; transposase IS4 family protein 578858 10814854 Flexsi_0562 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602811.1 577539 R 717231 CDS YP_004602812.1 336322845 10814855 578976..582209 1 NC_015672.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; Bacterial extracellular solute-binding proteins, family 3; PAS fold; TIGRFAM: PAS domain S-box; KEGG: ddf:DEFDS_1274 hypothetical protein; SPTR: Putative uncharacterized protein; signal transduction histidine kinase, nitrogen specific, NtrB 582209 10814855 Flexsi_0563 Flexistipes sinusarabici DSM 4947 signal transduction histidine kinase, nitrogen specific, NtrB YP_004602812.1 578976 D 717231 CDS YP_004602813.1 336322846 10814856 582282..583076 1 NC_015672.1 KEGG: ddf:DEFDS_1273 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 583076 10814856 Flexsi_0564 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602813.1 582282 D 717231 CDS YP_004602814.1 336322847 10814857 583080..583943 1 NC_015672.1 PFAM: Bacterial type II secretion system protein G; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_1272 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; hypothetical protein 583943 10814857 Flexsi_0565 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602814.1 583080 D 717231 CDS YP_004602815.1 336322848 10814858 583930..584832 1 NC_015672.1 PFAM: ABC transporter; KEGG: bao:BAMF_0920 dephospho-CoA kinase dephosphocoenzyme A kinase; SPTR: Dephospho-CoA kinase Dephosphocoenzyme A kinase; ABC transporter-like protein 584832 10814858 Flexsi_0566 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004602815.1 583930 D 717231 CDS YP_004602816.1 336322849 10814859 complement(584903..585421) 1 NC_015672.1 COGs: COG0778 Nitroreductase; InterPro IPR000415; KEGG: cni:Calni_1032 nitroreductase; PFAM: Nitroreductase-like; SPTR: Nitroreductase; hypothetical protein 585421 10814859 Flexsi_0567 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602816.1 584903 R 717231 CDS YP_004602817.1 336322850 10814860 585547..586059 1 NC_015672.1 PFAM: Nitroreductase family; manually curated; nitroreductase 586059 10814860 Flexsi_0568 Flexistipes sinusarabici DSM 4947 nitroreductase YP_004602817.1 585547 D 717231 CDS YP_004602818.1 336322851 10814862 587430..588383 1 NC_015672.1 PFAM: Uncharacterized BCR, YitT family COG1284; Uncharacterized protein conserved in bacteria (DUF2179); KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 588383 10814862 Flexsi_0570 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602818.1 587430 D 717231 CDS YP_004602819.1 336322852 10814863 complement(588389..588637) 1 NC_015672.1 COGs: COG0584 Glycerophosphoryl diester phosphodiesterase; InterPro IPR004129; KEGG: ddf:DEFDS_1578 glycerophosphoryl diester phosphodiesterase; PFAM: Glycerophosphoryl diester phosphodiesterase; SPTR: Glycerophosphoryl diester phosphodiesterase; hypothetical protein 588637 10814863 Flexsi_0571 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602819.1 588389 R 717231 CDS YP_004602820.1 336322853 10814864 complement(588918..589658) 1 NC_015672.1 PFAM: Glycerophosphoryl diester phosphodiesterase family; COGs: COG0635 Coproporphyrinogen III oxidase and related Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: dap:Dacet_1135 coproporphyrinogen dehydrogenase; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Coproporphyrinogen dehydrogenase; glycerophosphoryl diester phosphodiesterase 589658 10814864 Flexsi_0572 Flexistipes sinusarabici DSM 4947 glycerophosphoryl diester phosphodiesterase YP_004602820.1 588918 R 717231 CDS YP_004602821.1 336322854 10814865 complement(589744..591009) 1 NC_015672.1 PFAM: Radical SAM superfamily; HemN C-terminal region; manually curated; radical SAM protein 591009 10814865 Flexsi_0573 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004602821.1 589744 R 717231 CDS YP_004602822.1 336322855 10814867 591565..592671 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: dap:Dacet_1969 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; integral membrane sensor signal transduction histidine kinase 592671 10814867 Flexsi_0575 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004602822.1 591565 D 717231 CDS YP_004602823.1 336322856 10814868 592652..593989 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: ddf:DEFDS_0209 BadM/Rrf2 family transcriptional regulator; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; Fis family two component sigma-54 specific transcriptional regulator 593989 10814868 Flexsi_0576 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004602823.1 592652 D 717231 CDS YP_004602824.1 336322857 10814869 complement(594192..594617) 1 NC_015672.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase; InterPro IPR004511:IPR002500; KEGG: ppn:Palpr_2548 phosphoadenylyLSUlfate reductase (thioredoxin); PFAM: Phosphoadenosine phosphosulphate reductase; PRIAM: Phosphoadenylyl-sulfate reductase (thioredoxin); SPTR: Phosphoadenosine phosphosulfate reductase; TIGRFAM: Phosphoadenosine phosphosulphate reductase CysH-type; BadM/Rrf2 family transcriptional regulator 594617 10814869 Flexsi_0577 Flexistipes sinusarabici DSM 4947 BadM/Rrf2 family transcriptional regulator YP_004602824.1 594192 R 717231 CDS YP_004602825.1 336322858 10814870 595093..595800 1 NC_015672.1 PFAM: Phosphoadenosine phosphosulfate reductase family; TIGRFAM: thioredoxin-dependent adenylylsulfate APS reductase; phosophoadenylyl-sulfate reductase (thioredoxin); InterPro IPR010035:IPR003749; KEGG: cpb:Cphamn1_0643 thiamine biosynthesis protein ThiS; PFAM: ThiamineS; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; phosphoadenosine phosphosulfate reductase 595800 10814870 Flexsi_0578 Flexistipes sinusarabici DSM 4947 phosphoadenosine phosphosulfate reductase YP_004602825.1 595093 D 717231 CDS YP_004602826.1 336322859 10814871 595835..596062 1 NC_015672.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR000277; KEGG: ppn:Palpr_1214 cys/met metabolism pyridoxaL-phosphate-dependent protein; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: Cys/Met metabolism pyridoxal-phosphate-dependent protein; thiamine biosynthesis protein ThiS 596062 10814871 Flexsi_0579 Flexistipes sinusarabici DSM 4947 thiamine biosynthesis protein ThiS YP_004602826.1 595835 D 717231 CDS YP_004602827.1 336322860 10814872 596043..597296 1 NC_015672.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR000594:IPR007901; KEGG: cpb:Cphamn1_0645 UBA/ThiF-type NAD/FAD binding protein; PFAM: UBA/THIF-type NAD/FAD binding fold; MoeZ/MoeB; SPTR: UBA/THIF-type NAD/FAD binding protein; cysteine synthase 597296 10814872 Flexsi_0580 Flexistipes sinusarabici DSM 4947 cysteine synthase YP_004602827.1 596043 D 717231 CDS YP_004602828.1 336322861 10814873 597286..598095 1 NC_015672.1 PFAM: MoeZ/MoeB domain; ThiF family; COGs: COG1310 metal-dependent protease of the PAD1/JAB1 superfamily; InterPro IPR000555; KEGG: cpb:Cphamn1_0646 Mov34/MPN/PAD-1 family protein; PFAM: Mov34/MPN/PAD-1; SMART: Mov34/MPN/PAD-1; SPTR: Mov34/MPN/PAD-1 family protein; UBA/THIF-type NAD/FAD binding protein 598095 10814873 Flexsi_0581 Flexistipes sinusarabici DSM 4947 UBA/THIF-type NAD/FAD binding protein YP_004602828.1 597286 D 717231 CDS YP_004602829.1 336322862 10814874 598099..598494 1 NC_015672.1 PFAM: Mov34/MPN/PAD-1 family; COGs: COG0155 Sulfite reductase beta subunit (hemoprotein); InterPro IPR005117:IPR006067:IPR001455; KEGG: wsu:WS1004 hypothetical protein; PFAM: Nitrite/sulphite reductase 4Fe-4S region; Nitrite/sulphite reductase, hemoprotein beta-component, ferrodoxin-like; SirA-like; PRIAM: Ferredoxin--nitrite reductase; SPTR: Putative uncharacterized protein; Mov34/MPN/PAD-1 family protein 598494 10814874 Flexsi_0582 Flexistipes sinusarabici DSM 4947 Mov34/MPN/PAD-1 family protein YP_004602829.1 598099 D 717231 CDS YP_004602830.1 336322863 10814875 598496..600793 1 NC_015672.1 PFAM: Nitrite and sulphite reductase 4Fe-4S domain; SirA-like protein; Nitrite/Sulfite reductase ferredoxin-like half domain; COGs: COG0007 Uroporphyrinogen-III methylase; InterPro IPR006366:IPR000878; KEGG: ddf:DEFDS_2056 uroporphyrin-III C-methyltransferase; PFAM: Tetrapyrrole methylase; PRIAM: Uroporphyrinogen-III C-methyltransferase; SPTR: Uroporphyrin-III C-methyltransferase; TIGRFAM: Uroporphyrin-III C-methyltransferase, C-terminal; ferredoxin--nitrite reductase 600793 10814875 Flexsi_0583 Flexistipes sinusarabici DSM 4947 ferredoxin--nitrite reductase YP_004602830.1 598496 D 717231 CDS YP_004602831.1 336322864 10814876 600805..601572 1 NC_015672.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: uroporphyrin-III C-methyltransferase; COGs: COG1648 Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain); KEGG: cni:Calni_2122 siroheme synthase; SPTR: Siroheme synthase; uroporphyrin-III C-methyltransferase 601572 10814876 Flexsi_0584 Flexistipes sinusarabici DSM 4947 uroporphyrin-III C-methyltransferase YP_004602831.1 600805 D 717231 CDS YP_004602832.1 336322865 10814877 complement(601561..602010) 1 NC_015672.1 TIGRFAM: siroheme synthase, N-terminal domain; InterPro IPR000866; KEGG: dap:Dacet_2447 redoxin domain protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Redoxin domain protein; siroheme synthase 602010 10814877 Flexsi_0585 Flexistipes sinusarabici DSM 4947 siroheme synthase YP_004602832.1 601561 R 717231 CDS YP_004602833.1 336322866 10814878 complement(602026..602511) 1 NC_015672.1 PFAM: Redoxin; COGs: COG1606 ATP-utilizing protein of the PP-loop superfamily; KEGG: ddf:DEFDS_1637 hypothetical protein; SPTR: Putative uncharacterized protein; alkyl hydroperoxide reductase 602511 10814878 Flexsi_0586 Flexistipes sinusarabici DSM 4947 alkyl hydroperoxide reductase YP_004602833.1 602026 R 717231 CDS YP_004602834.1 336322867 10814879 complement(602704..603423) 1 NC_015672.1 PFAM: NAD synthase; TIGRFAM: TIGR00268 family protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506:IPR018318; KEGG: cni:Calni_1891 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase; PFAM: tRNA methyl transferase-like; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; hypothetical protein 603423 10814879 Flexsi_0587 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602834.1 602704 R 717231 CDS YP_004602835.1 336322868 10814880 complement(603410..604438) 1 NC_015672.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; InterPro IPR007359; KEGG: ddf:DEFDS_0306 hypothetical protein; PFAM: Positive regulator of sigma(E), RseC/MucC; SPTR: Putative uncharacterized protein; tRNA-specific 2-thiouridylase mnmA 604438 10814880 Flexsi_0588 Flexistipes sinusarabici DSM 4947 tRNA-specific 2-thiouridylase mnmA YP_004602835.1 603410 R 717231 CDS YP_004602836.1 336322869 10814881 complement(604513..604965) 1 NC_015672.1 PFAM: Positive regulator of sigma(E), RseC/MucC; COGs: COG0348 Polyferredoxin; KEGG: chy:CHY_2464 iron-sulfur cluster-binding protein; SPTR: Iron-sulfur cluster-binding protein; sigma E positive regulator RseC/MucC 604965 10814881 Flexsi_0589 Flexistipes sinusarabici DSM 4947 sigma E positive regulator RseC/MucC YP_004602836.1 604513 R 717231 CDS YP_004602837.1 336322870 10814882 complement(605057..607681) 1 NC_015672.1 KEGG: tjr:TherJR_2284 hypothetical protein; SPTR: Putative uncharacterized protein; putative TetR family transcriptional regulator 607681 10814882 Flexsi_0590 Flexistipes sinusarabici DSM 4947 putative TetR family transcriptional regulator YP_004602837.1 605057 R 717231 CDS YP_004602838.1 336322871 10814883 607961..608860 1 NC_015672.1 COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: tjr:TherJR_2282 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; hypothetical protein 608860 10814883 Flexsi_0591 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602838.1 607961 D 717231 CDS YP_004602839.1 336322872 10814884 608864..610843 1 NC_015672.1 PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG3088 Uncharacterized protein involved in biosynthesis of c-type cytochromes; KEGG: tjr:TherJR_2281 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome c assembly protein 610843 10814884 Flexsi_0592 Flexistipes sinusarabici DSM 4947 cytochrome c assembly protein YP_004602839.1 608864 D 717231 CDS YP_004602840.1 336322873 10814885 610840..611325 1 NC_015672.1 PFAM: Cytochrome C biogenesis protein; KEGG: chy:CHY_1386 hypothetical protein; SPTR: Conserved domain protein; hypothetical protein 611325 10814885 Flexsi_0593 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602840.1 610840 D 717231 CDS YP_004602841.1 336322874 10814886 611338..611673 1 NC_015672.1 hypothetical protein 611673 10814886 Flexsi_0594 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602841.1 611338 D 717231 CDS YP_004602842.1 336322875 10814887 611666..612559 1 NC_015672.1 hypothetical protein 612559 10814887 Flexsi_0595 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602842.1 611666 D 717231 CDS YP_004602843.1 336322876 10814888 612575..613087 1 NC_015672.1 KEGG: tjr:TherJR_2193 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 613087 10814888 Flexsi_0596 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602843.1 612575 D 717231 CDS YP_004602844.1 336322877 10814889 613088..613669 1 NC_015672.1 PFAM: Predicted membrane protein (DUF2318); COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: tjr:TherJR_2191 protein of unknown function DUF214; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; hypothetical protein 613669 10814889 Flexsi_0597 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602844.1 613088 D 717231 CDS YP_004602845.1 336322878 10814890 613651..614781 1 NC_015672.1 PFAM: Predicted permease; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: sso:SSO0688 ABC transporter, ATP binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; hypothetical protein 614781 10814890 Flexsi_0598 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602845.1 613651 D 717231 CDS YP_004602846.1 336322879 10814891 614799..615506 1 NC_015672.1 PFAM: ABC transporter; InterPro IPR003838; KEGG: mac:MA1674 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; phosphonate-transporting ATPase 615506 10814891 Flexsi_0599 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004602846.1 614799 D 717231 CDS YP_004602847.1 336322880 10814892 615499..616605 1 NC_015672.1 PFAM: Predicted permease; KEGG: cni:Calni_1066 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 616605 10814892 Flexsi_0600 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602847.1 615499 D 717231 CDS YP_004602848.1 336322881 10814893 616743..617597 1 NC_015672.1 PFAM: DSBA-like thioredoxin domain; InterPro IPR011462; KEGG: caa:Caka_2052 protein of unknown function DUF1568; SPTR: Putative uncharacterized protein; hypothetical protein 617597 10814893 Flexsi_0601 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602848.1 616743 D 717231 CDS YP_004602849.1 336322882 10814894 617721..618602 1 NC_015672.1 PFAM: Transposase IS200 like; manually curated; hypothetical protein 618602 10814894 Flexsi_0602 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602849.1 617721 D 717231 CDS YP_004602850.1 336322883 10814896 complement(619063..619818) 1 NC_015672.1 PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005815:IPR005814; KEGG: adenosylmethionine-8-amino-7-oxononanoate aminotransferase apoenzyme; biotin synthase; PFAM: Aminotransferase class-III; PRIAM: Adenosylmethionine--8-amino-7-oxononanoate transaminase; SPTR: Adenosylmethionine-8-amino-7-oxononanoate transaminase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; biotin--acetyl-CoA-carboxylase ligase 619818 10814896 Flexsi_0604 Flexistipes sinusarabici DSM 4947 biotin--acetyl-CoA-carboxylase ligase YP_004602850.1 619063 R 717231 CDS YP_004602851.1 336322884 10814897 619920..621212 1 NC_015672.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; COGs: COG0132 Dethiobiotin synthetase; HAMAP: Dethiobiotin synthase; InterPro IPR004472; KEGG: dha:DEHA2G24772g DEHA2G24772p; PRIAM: Dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 621212 10814897 Flexsi_0605 Flexistipes sinusarabici DSM 4947 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004602851.1 619920 D 717231 CDS YP_004602852.1 336322885 10814898 621188..621826 1 NC_015672.1 TIGRFAM: dethiobiotin synthase; COGs: COG0502 Biotin synthase; HAMAP: Biotin synthase; InterPro IPR002684:IPR007197:IPR010722:IPR006638; KEGG: dol:Dole_0682 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: Biotin synthase; dethiobiotin synthetase 621826 10814898 Flexsi_0606 Flexistipes sinusarabici DSM 4947 dethiobiotin synthetase YP_004602852.1 621188 D 717231 CDS YP_004602853.1 336322886 10814899 621813..622772 1 NC_015672.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: ddf:DEFDS_1301 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; biotin synthase 622772 10814899 Flexsi_0607 Flexistipes sinusarabici DSM 4947 biotin synthase YP_004602853.1 621813 D 717231 CDS YP_004602854.1 336322887 10814900 622769..623914 1 NC_015672.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: ddf:DEFDS_1302 hypothetical protein; SPTR: Putative uncharacterized protein; 8-amino-7-oxononanoate synthase 623914 10814900 Flexsi_0608 Flexistipes sinusarabici DSM 4947 8-amino-7-oxononanoate synthase YP_004602854.1 622769 D 717231 CDS YP_004602855.1 336322888 10814901 623893..624495 1 NC_015672.1 COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: ddf:DEFDS_1303 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Biotin biosynthesis protein BioC; hypothetical protein 624495 10814901 Flexsi_0609 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602855.1 623893 D 717231 CDS YP_004602856.1 336322889 10814902 624492..625247 1 NC_015672.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; COGs: COG2873 O-acetylhomoserine sulfhydrylase; InterPro IPR006235:IPR000277; KEGG: cni:Calni_0437 O-acetylhomoserine sulfhydrolase; PFAM: Cys/Met metabolism, pyridoxal phosphate-dependent enzyme; PRIAM: Cysteine synthase; SPTR: O-acetylhomoserine sulfhydrolase; TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; type 11 methyltransferase 625247 10814902 Flexsi_0610 Flexistipes sinusarabici DSM 4947 type 11 methyltransferase YP_004602856.1 624492 D 717231 CDS YP_004602857.1 336322890 10814903 625564..626850 1 NC_015672.1 PFAM: Cys/Met metabolism PLP-dependent enzyme; TIGRFAM: OAH/OAS sulfhydrylase; COGs: COG0031 Cysteine synthase; InterPro IPR005856:IPR005859:IPR001926; KEGG: cni:Calni_0436 cysteine synthase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Cysteine synthase; SPTR: Cysteine synthase; TIGRFAM: Cysteine synthase K/M; Cysteine synthase A; O-acetylhomoserine/O-acetylserine sulfhydrylase 626850 10814903 Flexsi_0611 Flexistipes sinusarabici DSM 4947 O-acetylhomoserine/O-acetylserine sulfhydrylase YP_004602857.1 625564 D 717231 CDS YP_004602858.1 336322891 10814904 626868..627815 1 NC_015672.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; KEGG: dat:HRM2_02200 hypothetical protein; SPTR: Putative uncharacterized protein; cysteine synthase 627815 10814904 Flexsi_0612 Flexistipes sinusarabici DSM 4947 cysteine synthase YP_004602858.1 626868 D 717231 CDS YP_004602859.1 336322892 10814905 complement(628037..628375) 1 NC_015672.1 KEGG: cni:Calni_0020 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 628375 10814905 Flexsi_0613 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602859.1 628037 R 717231 CDS YP_004602860.1 336322893 10814906 complement(628338..629003) 1 NC_015672.1 hypothetical protein 629003 10814906 Flexsi_0614 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602860.1 628338 R 717231 CDS YP_004602861.1 336322894 10814907 complement(629188..629421) 1 NC_015672.1 KEGG: gur:Gura_1104 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 629421 10814907 Flexsi_0615 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602861.1 629188 R 717231 CDS YP_004602862.1 336322895 10814908 629656..630096 1 NC_015672.1 This gene is disrupted by insertion of repetitive element; manually curated; hypothetical protein 630096 10814908 Flexsi_0616 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602862.1 629656 D 717231 CDS YP_004602863.1 336322896 10814910 complement(630546..631595) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); InterPro IPR003593; KEGG: gur:Gura_1106 AAA ATPase; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase; transposase IS4 family protein 631595 10814910 Flexsi_0618 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602863.1 630546 R 717231 CDS YP_004602864.1 336322897 10814911 632821..633621 1 NC_015672.1 PFAM: Archaeal ATPase; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR003593:IPR010066; KEGG: hch:HCH_00010 dipeptide/oligopeptide/nickel ABC transporter ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Oligopeptide transport ATP-binding protein AppF; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; AAA ATPase 633621 10814911 Flexsi_0619 Flexistipes sinusarabici DSM 4947 AAA ATPase YP_004602864.1 632821 D 717231 CDS YP_004602865.1 336322898 10814912 633736..634575 1 NC_015672.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650:IPR010158; KEGG: azl:AZL_d01280 beta-ureidopropionase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-carbamoyl-L-amino-acid hydrolase; SPTR: Beta-ureidopropionase; TIGRFAM: Amidase, hydantoinase/carbamoylase; tmRNA as predicted by Rfam (RF00023), score 217.09; oligopeptide/dipeptide ABC transporter ATPase 634575 10814912 Flexsi_0620 Flexistipes sinusarabici DSM 4947 oligopeptide/dipeptide ABC transporter ATPase YP_004602865.1 633736 D 717231 CDS YP_004602866.1 336322899 10814913 634588..635823 1 NC_015672.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidase, hydantoinase/carbamoylase family; COGs: COG0691 tmRNA-binding protein; HAMAP: SsrA-binding protein; InterPro IPR000037; KEGG: ddf:DEFDS_1882 SsrA RNA (tmRNA)-binding protein; PFAM: SsrA-binding protein; SPTR: SsrA-binding protein; TIGRFAM: SsrA-binding protein; hydantoinase/carbamoylase family amidase 635823 10814913 Flexsi_R0008 Flexistipes sinusarabici DSM 4947 hydantoinase/carbamoylase family amidase YP_004602866.1 634588 D 717231 CDS YP_004602867.1 336322900 10814914 complement(636764..637219) 1 NC_015672.1 PFAM: SmpB protein; TIGRFAM: SsrA-binding protein; SsrA-binding protein 637219 10814914 Flexsi_0622 Flexistipes sinusarabici DSM 4947 SsrA-binding protein YP_004602867.1 636764 R 717231 CDS YP_004602868.1 336322901 10814919 complement(637935..639221) 1 NC_015672.1 PFAM: Adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthase; COGs: COG3705 ATP phosphoribosyltransferase involved in histidine biosynthesis; HAMAP: ATP phosphoribosyltransferase regulatory subunit; InterPro IPR002314; KEGG: ddf:DEFDS_2123 ATP phosphoribosyltransferase regulatory subunit; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; PRIAM: Histidine--tRNA ligase; SPTR: ATP phosphoribosyltransferase regulatory subunit; adenylosuccinate synthetase 639221 10814919 Flexsi_0623 Flexistipes sinusarabici DSM 4947 adenylosuccinate synthetase YP_004602868.1 637935 R 717231 CDS YP_004602869.1 336322902 10814920 complement(639230..640342) 1 NC_015672.1 PFAM: tRNA synthetase class II core domain (G, H, P, S and T); COGs: COG0075 Serine-pyruvate aminotransferase/ aspartate aminotransferase; InterPro IPR000192; KEGG: cni:Calni_0373 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Serine--glyoxylate transaminase; SPTR: Aminotransferase class V; ATP phosphoribosyltransferase regulatory subunit 640342 10814920 Flexsi_0624 Flexistipes sinusarabici DSM 4947 ATP phosphoribosyltransferase regulatory subunit YP_004602869.1 639230 R 717231 CDS YP_004602870.1 336322903 10814921 complement(640351..641496) 1 NC_015672.1 PFAM: Aminotransferase class-V; InterPro IPR018649; KEGG: pin:Ping_1904 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; serine--glyoxylate transaminase 641496 10814921 Flexsi_0625 Flexistipes sinusarabici DSM 4947 serine--glyoxylate transaminase YP_004602870.1 640351 R 717231 CDS YP_004602871.1 336322904 10814922 641933..642151 1 NC_015672.1 PFAM: Predicted membrane protein (DUF2078); COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: histidine kinase A domain-containing protein; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SPTR: Histidine kinase A domain protein; hypothetical protein 642151 10814922 Flexsi_0626 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602871.1 641933 D 717231 CDS YP_004602872.1 336322905 10814923 642198..643538 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_2111 two-component system, NtrC family, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, transcriptional regulator; integral membrane sensor signal transduction histidine kinase 643538 10814923 Flexsi_0627 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004602872.1 642198 D 717231 CDS YP_004602873.1 336322906 10814924 643531..644856 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0165 Argininosuccinate lyase; HAMAP: Argininosuccinate lyase; InterPro IPR000362:IPR009049; KEGG: dap:Dacet_2886 argininosuccinate lyase; PFAM: Fumarate lyase; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: Argininosuccinate lyase; Fis family two component sigma-54 specific transcriptional regulator 644856 10814924 Flexsi_0628 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004602873.1 643531 D 717231 CDS YP_004602874.1 336322907 10814925 644858..646234 1 NC_015672.1 PFAM: Lyase; TIGRFAM: argininosuccinate lyase; KEGG: cni:Calni_0196 hypothetical protein; SPTR: Putative uncharacterized protein; argininosuccinate lyase 646234 10814925 Flexsi_0629 Flexistipes sinusarabici DSM 4947 argininosuccinate lyase YP_004602874.1 644858 D 717231 CDS YP_004602875.1 336322908 10814926 646231..647100 1 NC_015672.1 KEGG: ddf:DEFDS_2108 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 647100 10814926 Flexsi_0630 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602875.1 646231 D 717231 CDS YP_004602876.1 336322909 10814927 647187..647906 1 NC_015672.1 COGs: COG1469 conserved hypothetical protein; InterPro IPR003801; KEGG: cni:Calni_0405 gtp cyclohydrolase I; PFAM: Protein of unknown function DUF198; PRIAM: GTP cyclohydrolase I; SPTR: GTP cyclohydrolase folE2; TIGRFAM: Protein of unknown function DUF198; hypothetical protein 647906 10814927 Flexsi_0631 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602876.1 647187 D 717231 CDS YP_004602877.1 336322910 10814928 647908..648690 1 NC_015672.1 PFAM: Uncharacterized ACR, COG1469; TIGRFAM: TIGR00294 family protein; COGs: COG3264 Small-conductance mechanosensitive channel; InterPro IPR008910:IPR006685; KEGG: ddf:DEFDS_1276 mechanosensitive ion channel, MscS family; PFAM: Mechanosensitive ion channel MscS; Conserved TM helix; SPTR: Mechanosensitive ion channel, MscS family; hypothetical protein 648690 10814928 Flexsi_0632 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602877.1 647908 D 717231 CDS YP_004602878.1 336322911 10814929 complement(648834..649643) 1 NC_015672.1 PFAM: Mechanosensitive ion channel; Conserved TM helix; KEGG: dap:Dacet_1137 hypothetical protein; SPTR: Putative uncharacterized protein; mechanosensitive ion channel MscS 649643 10814929 Flexsi_0633 Flexistipes sinusarabici DSM 4947 mechanosensitive ion channel MscS YP_004602878.1 648834 R 717231 CDS YP_004602879.1 336322912 10814930 649759..650061 1 NC_015672.1 COGs: COG1826 Sec-independent protein secretion pathway components; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR003369:IPR006312; KEGG: ddf:DEFDS_2139 twin-arginine translocation system component TatB; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog 2; hypothetical protein 650061 10814930 Flexsi_0634 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602879.1 649759 D 717231 CDS YP_004602880.1 336322913 10814931 650160..650540 1 NC_015672.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; twin arginine-targeting protein translocase TatB; COGs: COG0805 Sec-independent protein secretion pathway component TatC; InterPro IPR002033:IPR019822; KEGG: ddf:DEFDS_2140 twin-arginine translocation system component TatC; PFAM: Sec-independent periplasmic protein translocase; SPTR: Twin-arginine translocation system component TatC; TIGRFAM: Twin arginine-targeting protein translocase, TatC; Sec-independent protein translocase protein tatA/E-like protein 650540 10814931 Flexsi_0635 Flexistipes sinusarabici DSM 4947 Sec-independent protein translocase protein tatA/E-like protein YP_004602880.1 650160 D 717231 CDS YP_004602881.1 336322914 10814932 650540..651292 1 NC_015672.1 PFAM: Sec-independent protein translocase protein (TatC); TIGRFAM: Twin arginine targeting (Tat) protein translocase TatC; COGs: COG2896 Molybdenum cofactor biosynthesis protein; InterPro IPR007197:IPR010505:IPR006638:IPR013483; KEGG: cni:Calni_1795 gtp cyclohydrolase subunit MoaA; PFAM: Molybdenum cofactor synthesis C-terminal; Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Molybdenum cofactor biosynthesis protein A; TIGRFAM: Molybdenum cofactor biosynthesis protein A; Sec-independent protein translocase subunit TatC 651292 10814932 Flexsi_0636 Flexistipes sinusarabici DSM 4947 Sec-independent protein translocase subunit TatC YP_004602881.1 650540 D 717231 CDS YP_004602882.1 336322915 10814933 651285..652274 1 NC_015672.1 PFAM: Molybdenum Cofactor Synthesis C; Radical SAM superfamily; TIGRFAM: molybdenum cofactor biosynthesis protein A, bacterial; COGs: COG3875 conserved hypothetical protein; InterPro IPR018657; KEGG: ddf:DEFDS_2142 hypothetical protein; PFAM: Protein of unknown function DUF2088; SPTR: Putative uncharacterized protein; molybdenum cofactor biosynthesis protein A 652274 10814933 Flexsi_0637 Flexistipes sinusarabici DSM 4947 molybdenum cofactor biosynthesis protein A YP_004602882.1 651285 D 717231 CDS YP_004602883.1 336322916 10814934 652333..653541 1 NC_015672.1 PFAM: Uncharacterized conserved protein (DUF2088); COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 653541 10814934 Flexsi_0638 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602883.1 652333 D 717231 CDS YP_004602884.1 336322917 10814935 653725..654774 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 654774 10814935 Flexsi_0639 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602884.1 653725 D 717231 CDS YP_004602885.1 336322918 10814936 complement(655103..656779) 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: dap:Dacet_2499 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 656779 10814936 Flexsi_0640 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602885.1 655103 R 717231 CDS YP_004602886.1 336322919 10814937 complement(657051..657545) 1 NC_015672.1 PFAM: Protein of unknown function (DUF456); COGs: COG1235 Metal-dependent hydrolase of the beta-lactamase superfamily I; KEGG: ddf:DEFDS_2161 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 657545 10814937 Flexsi_0641 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602886.1 657051 R 717231 CDS YP_004602887.1 336322920 10814938 complement(657546..658307) 1 NC_015672.1 PFAM: Metallo-beta-lactamase superfamily; hypothetical protein 658307 10814938 Flexsi_0642 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602887.1 657546 R 717231 CDS YP_004602888.1 336322921 10814939 complement(658314..658889) 1 NC_015672.1 manually curated; hypothetical protein 658889 10814939 Flexsi_0643 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602888.1 658314 R 717231 CDS YP_004602889.1 336322922 10814941 complement(661451..662551) 1 NC_015672.1 KEGG: ddf:DEFDS_0190 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 662551 10814941 Flexsi_0645 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602889.1 661451 R 717231 CDS YP_004602890.1 336322923 10814942 complement(662538..662861) 1 NC_015672.1 PFAM: Protein of unknown function (DUF1049); COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_0189 histidine triad family protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad family protein; hypothetical protein 662861 10814942 Flexsi_0646 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602890.1 662538 R 717231 CDS YP_004602891.1 336322924 10814943 complement(662858..663364) 1 NC_015672.1 PFAM: HIT domain; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; HAMAP: NAD-dependent deacetylase; InterPro IPR003000; KEGG: ddf:DEFDS_0188 transcription regulator, Sir2 family; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Transcription regulator, Sir2 family; histidine triad (HIT) protein 663364 10814943 Flexsi_0647 Flexistipes sinusarabici DSM 4947 histidine triad (HIT) protein YP_004602891.1 662858 R 717231 CDS YP_004602892.1 336322925 10814944 complement(663357..664109) 1 NC_015672.1 PFAM: Sir2 family; COGs: COG0679 permease; InterPro IPR004776; KEGG: ddf:DEFDS_0071 hypothetical protein; PFAM: Auxin efflux carrier; SPTR: Auxin Efflux Carrier; NAD-dependent deacetylase 664109 10814944 Flexsi_0648 Flexistipes sinusarabici DSM 4947 NAD-dependent deacetylase YP_004602892.1 663357 R 717231 CDS YP_004602893.1 336322926 10814945 complement(664431..665333) 1 NC_015672.1 PFAM: Membrane transport protein; COGs: COG2217 Cation transport ATPase; InterProIPR006121:IPR008250:IPR005834:IPR006403:IPR 006416:IPR001757; KEGG: toc:Toce_0722 copper-translocating P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Copper-exporting ATPase; SPTR: Copper-translocating P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P type, cation/copper-transporter; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; auxin efflux carrier 665333 10814945 Flexsi_0649 Flexistipes sinusarabici DSM 4947 auxin efflux carrier YP_004602893.1 664431 R 717231 CDS YP_004602894.1 336322927 10814946 665820..668210 1 NC_015672.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: copper-(or silver)-translocating P-type ATPase; copper ion binding protein; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; COGs: COG2608 Copper chaperone; InterPro IPR006121:IPR006122; KEGG: nth:Nther_1097 copper ion binding protein; PFAM: Heavy metal transport/detoxification protein; SPTR: Copper ion binding protein; TIGRFAM: Copper ion-binding; heavy metal translocating P-type ATPase 668210 10814946 Flexsi_0650 Flexistipes sinusarabici DSM 4947 heavy metal translocating P-type ATPase YP_004602894.1 665820 D 717231 CDS YP_004602895.1 336322928 10814947 668231..668440 1 NC_015672.1 PFAM: Heavy-metal-associated domain; TIGRFAM: copper ion binding protein; COGs: COG1937 conserved hypothetical protein; InterPro IPR003735; KEGG: cdl:CDR20291_2619 hypothetical protein; PFAM: Protein of unknown function DUF156; SPTR: Putative uncharacterized protein; copper ion binding protein 668440 10814947 Flexsi_0651 Flexistipes sinusarabici DSM 4947 copper ion binding protein YP_004602895.1 668231 D 717231 CDS YP_004602896.1 336322929 10814948 668453..668740 1 NC_015672.1 PFAM: Uncharacterised BCR, COG1937; COGs: COG0289 Dihydrodipicolinate reductase; HAMAP: Dihydrodipicolinate reductase; InterPro IPR000846:IPR011770; KEGG: dap:Dacet_2492 dihydrodipicolinate reductase; PFAM: Dihydrodipicolinate reductase; PRIAM: Dihydrodipicolinate reductase; SPTR: Dihydrodipicolinate reductase; TIGRFAM: Dihydrodipicolinate reductase, bacterial/plant; hypothetical protein 668740 10814948 Flexsi_0652 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602896.1 668453 D 717231 CDS YP_004602897.1 336322930 10814949 complement(668767..669570) 1 NC_015672.1 PFAM: Dihydrodipicolinate reductase, N-terminus; Dihydrodipicolinate reductase, C-terminus; TIGRFAM: dihydrodipicolinate reductase; COGs: COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase; HAMAP: Dihydrodipicolinate synthase; InterPro IPR002220:IPR005263; KEGG: ddf:DEFDS_0215 dihydrodipicolinate synthase; PFAM: Dihydrodipicolinate synthetase; SPTR: Dihydrodipicolinate synthase; TIGRFAM: Dihydrodipicolinate synthase subfamily; dihydrodipicolinate reductase 669570 10814949 Flexsi_0653 Flexistipes sinusarabici DSM 4947 dihydrodipicolinate reductase YP_004602897.1 668767 R 717231 CDS YP_004602898.1 336322931 10814950 complement(669584..670465) 1 NC_015672.1 PFAM: Dihydrodipicolinate synthetase family; TIGRFAM: dihydrodipicolinate synthase; COGs: COG0253 Diaminopimelate epimerase; HAMAP: Diaminopimelate epimerase; InterPro IPR001653; KEGG: ddf:DEFDS_0214 diaminopimelate epimerase; PFAM: Diaminopimelate epimerase; SPTR: Diaminopimelate epimerase; TIGRFAM: Diaminopimelate epimerase; dihydrodipicolinate synthase 670465 10814950 Flexsi_0654 Flexistipes sinusarabici DSM 4947 dihydrodipicolinate synthase YP_004602898.1 669584 R 717231 CDS YP_004602899.1 336322932 10814951 complement(670480..671295) 1 NC_015672.1 PFAM: Diaminopimelate epimerase; TIGRFAM: diaminopimelate epimerase; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: dap:Dacet_2487 hydrogenase maturation protease; PFAM: Peptidase A31, hydrogen uptake protein; SPTR: Hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; diaminopimelate epimerase 671295 10814951 Flexsi_0655 Flexistipes sinusarabici DSM 4947 diaminopimelate epimerase YP_004602899.1 670480 R 717231 CDS YP_004602900.1 336322933 10814952 complement(671362..671844) 1 NC_015672.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; COGs: COG1969 Ni Fe-hydrogenase I cytochrome b subunit; InterPro IPR011577:IPR000516; KEGG: cni:Calni_0098 ni/fe-hydrogenase, b-type cytochrome subunit; SPTR: Ni/Fe-hydrogenase, b-type cytochrome subunit; TIGRFAM: Nickel-dependent hydrogenase b-type cytochrome subunit; hydrogenase maturation protease 671844 10814952 Flexsi_0656 Flexistipes sinusarabici DSM 4947 hydrogenase maturation protease YP_004602900.1 671362 R 717231 CDS YP_004602901.1 336322934 10814953 complement(671890..672561) 1 NC_015672.1 PFAM: Cytochrome b(N-terminal)/b6/petB; TIGRFAM: Ni/Fe-hydrogenase, b-type cytochrome subunit; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: ddf:DEFDS_0076 Ni-Fe hydrogenase large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Ni-Fe hydrogenase, large subunit; Ni/Fe-hydrogenase, b-type cytochrome subunit 672561 10814953 Flexsi_0657 Flexistipes sinusarabici DSM 4947 Ni/Fe-hydrogenase, b-type cytochrome subunit YP_004602901.1 671890 R 717231 CDS YP_004602902.1 336322935 10814954 complement(672572..674284) 1 NC_015672.1 PFAM: Nickel-dependent hydrogenase; COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR006311; KEGG: ddf:DEFDS_0077 Ni-Fe hydrogenase small subunit; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Ni-Fe hydrogenase, small subunit; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; cytochrome-c3 hydrogenase 674284 10814954 Flexsi_0658 Flexistipes sinusarabici DSM 4947 cytochrome-c3 hydrogenase YP_004602902.1 672572 R 717231 CDS YP_004602903.1 336322936 10814955 complement(674303..675400) 1 NC_015672.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; hydrogenase (NiFe) small subunit (hydA); COGs: COG2518 Protein-L-isoaspartate carboxylmethyltransferase; InterPro IPR000682; KEGG: ddf:DEFDS_1899 protein-L-isoaspartate (D-aspartate) O-methyltransferase; PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; PRIAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; SPTR: Protein-L-isoaspartate O-methyltransferase; TIGRFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase; hydrogenase (NiFe) small subunit HydA 675400 10814955 Flexsi_0659 Flexistipes sinusarabici DSM 4947 hydrogenase (NiFe) small subunit HydA YP_004602903.1 674303 R 717231 CDS YP_004602904.1 336322937 10814956 complement(675496..676125) 1 NC_015672.1 PFAM: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); TIGRFAM: protein-L-isoaspartate(D-aspartate) O-methyltransferase; COGs: COG1488 Nicotinic acid phosphoribosyltransferase; InterPro IPR002638; KEGG: ddf:DEFDS_1900 nicotinate phosphoribosyltransferase; PFAM: Quinolinate phosphoribosyl transferase; SPTR: Nicotinate phosphoribosyltransferase; protein-L-isoaspartate O-methyltransferase 676125 10814956 Flexsi_0660 Flexistipes sinusarabici DSM 4947 protein-L-isoaspartate O-methyltransferase YP_004602904.1 675496 R 717231 CDS YP_004602905.1 336322938 10814957 complement(676106..677296) 1 NC_015672.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; TIGRFAM: putative nicotinate phosphoribosyltransferase; COGs: COG3769 hydrolase (HAD superfamily); InterPro IPR013200:IPR006381:IPR006379; KEGG: pmx:PERMA_1578 mannosyl-3-phosphoglycerate phosphatase; PFAM: HAD superfamily hydrolase-like, type 3; PRIAM: Mannosyl-3-phosphoglycerate phosphatase; SPTR: Glucosyl-3-phosphoglycerate phosphatase; TIGRFAM: HAD-superfamily hydrolase, superfamily IIB, YedP; HAD-superfamily hydrolase, subfamily IIB; quinolinate phosphoribosyl transferase 677296 10814957 Flexsi_0661 Flexistipes sinusarabici DSM 4947 quinolinate phosphoribosyl transferase YP_004602905.1 676106 R 717231 CDS YP_004602906.1 336322939 10814958 677627..678433 1 NC_015672.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: mannosyl-3-phosphoglycerate phosphatase family; HAD-superfamily hydrolase, subfamily IIB; mannosyl-3-phosphoglycerate phosphatase; KEGG: ddf:DEFDS_0171 hypothetical protein; SPTR: Putative uncharacterized protein; mannosyl-3-phosphoglycerate phosphatase family protein 678433 10814958 Flexsi_0662 Flexistipes sinusarabici DSM 4947 mannosyl-3-phosphoglycerate phosphatase family protein YP_004602906.1 677627 D 717231 CDS YP_004602907.1 336322940 10814959 678464..679675 1 NC_015672.1 COGs: COG0114 Fumarase; HAMAP: Fumarate hydratase class II; InterPro IPR000362:IPR018951; KEGG: cni:Calni_0380 fumarase; PFAM: Fumarate lyase; Fumarase C, C-terminal; PRIAM: Fumarate hydratase; SPTR: Fumarase; hypothetical protein 679675 10814959 Flexsi_0663 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602907.1 678464 D 717231 CDS YP_004602908.1 336322941 10814960 complement(679898..681274) 1 NC_015672.1 PFAM: Lyase; Fumarase C C-terminus; TIGRFAM: aspartate ammonia-lyase; fumarate hydratase, class II; COGs: COG1875 ATPase related to phosphate starvation-inducible protein PhoH; InterPro IPR003714:IPR006596; KEGG: ddf:DEFDS_0226 phosphate starvation-induced protein; PFAM: PhoH-like protein; SMART: Nucleotide binding protein, PINc; SPTR: Phosphate starvation-induced protein; class II fumarate hydratase 681274 10814960 Flexsi_0664 Flexistipes sinusarabici DSM 4947 class II fumarate hydratase YP_004602908.1 679898 R 717231 CDS YP_004602909.1 336322942 10814961 682099..683400 1 NC_015672.1 PFAM: PhoH-like protein; COGs: COG0279 Phosphoheptose isomerase; HAMAP: Phosphoheptose isomerase; InterPro IPR020620; KEGG: ddf:DEFDS_0227 phosphoheptose isomerase; SPTR: Phosphoheptose isomerase; PhoH family protein 683400 10814961 Flexsi_0665 Flexistipes sinusarabici DSM 4947 PhoH family protein YP_004602909.1 682099 D 717231 CDS YP_004602910.1 336322943 10814962 683645..684238 1 NC_015672.1 PFAM: SIS domain; TIGRFAM: phosphoheptose isomerase; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR004820:IPR004821; KEGG: ddf:DEFDS_0228 glycerol-3-phosphate cytidyltransferase; PFAM: Cytidylyltransferase; SPTR: Glycerol-3-phosphate cytidyltransferase; TIGRFAM: Cytidyltransferase-related; phosphoheptose isomerase 684238 10814962 Flexsi_0666 Flexistipes sinusarabici DSM 4947 phosphoheptose isomerase YP_004602910.1 683645 D 717231 CDS YP_004602911.1 336322944 10814963 684242..684718 1 NC_015672.1 PFAM: Cytidylyltransferase; TIGRFAM: rfaE bifunctional protein, domain II; cytidyltransferase-related domain; COGs: COG1197 Transcription-repair coupling factor (superfamily II helicase); InterProIPR003711:IPR011545:IPR001650:IPR005118:IPR 014001:IPR004576; KEGG: cni:Calni_1739 transcription-repair coupling factor; PFAM: Transcription factor CarD; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; Transcription-repair-coupling factor; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: Transcription-repair coupling factor; TIGRFAM: Transcription-repair coupling factor; cytidyltransferase-related domain-containing protein 684718 10814963 Flexsi_0667 Flexistipes sinusarabici DSM 4947 cytidyltransferase-related domain-containing protein YP_004602911.1 684242 D 717231 CDS YP_004602912.1 336322945 10814964 684720..688046 1 NC_015672.1 PFAM: Helicase conserved C-terminal domain; TRCF domain; CarD-like/TRCF domain; DEAD/DEAH box helicase; TIGRFAM: transcription-repair coupling factor (mfd); InterPro IPR000297; KEGG: cni:Calni_0078 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; transcription-repair coupling factor 688046 10814964 Flexsi_0668 Flexistipes sinusarabici DSM 4947 transcription-repair coupling factor YP_004602912.1 684720 D 717231 CDS YP_004602913.1 336322946 10814965 688075..689067 1 NC_015672.1 PFAM: PPIC-type PPIASE domain; InterPro IPR015391; KEGG: ddf:DEFDS_0231 peptidyl-prolyl cis-trans isomerase SurA; PFAM: SurA N-terminal; SPTR: Peptidyl-prolyl cis-trans isomerase SurA; PpiC-type peptidyl-prolyl cis-trans isomerase 689067 10814965 Flexsi_0669 Flexistipes sinusarabici DSM 4947 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004602913.1 688075 D 717231 CDS YP_004602914.1 336322947 10814966 689018..689908 1 NC_015672.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; COGs: COG2262 GTPase; InterPro IPR002917:IPR016496; KEGG: cni:Calni_0703 gtp-binding protein HflX; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein HflX; TIGRFAM: GTP-binding protein, HflX; manually curated; SurA domain-containing protein 689908 10814966 Flexsi_0670 Flexistipes sinusarabici DSM 4947 SurA domain-containing protein YP_004602914.1 689018 D 717231 CDS YP_004602915.1 336322948 10814967 689984..691630 1 NC_015672.1 PFAM: GTPase of unknown function; TIGRFAM: GTP-binding protein HflX; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_0454 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; GTP-binding proten HflX 691630 10814967 Flexsi_0671 Flexistipes sinusarabici DSM 4947 GTP-binding proten HflX YP_004602915.1 689984 D 717231 CDS YP_004602916.1 336322949 10814968 complement(691627..691965) 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG2834 Outer membrane lipoprotein-sorting protein; InterPro IPR004564; KEGG: ddf:DEFDS_0271 hypothetical protein; PFAM: Outer membrane lipoprotein carrier protein LolA; SPTR: Putative uncharacterized protein; response regulator receiver protein 691965 10814968 Flexsi_0672 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004602916.1 691627 R 717231 CDS YP_004602917.1 336322950 10814969 692028..692633 1 NC_015672.1 PFAM: Outer membrane lipoprotein carrier protein LolA; TIGRFAM: periplasmic chaperone LolA; COGs: COG1663 Tetraacyldisaccharide-1-P 4'-kinase; HAMAP: Tetraacyldisaccharide 4'-kinase; InterPro IPR003758; KEGG: ddf:DEFDS_0341 tetraacyldisaccharide 4'-kinase; PFAM: Tetraacyldisaccharide 4'-kinase; PRIAM: Tetraacyldisaccharide 4'-kinase; SPTR: Tetraacyldisaccharide 4'-kinase; TIGRFAM: Tetraacyldisaccharide 4'-kinase; outer membrane lipoprotein carrier protein LolA 692633 10814969 Flexsi_0673 Flexistipes sinusarabici DSM 4947 outer membrane lipoprotein carrier protein LolA YP_004602917.1 692028 D 717231 CDS YP_004602918.1 336322951 10814970 692635..693555 1 NC_015672.1 PFAM: Tetraacyldisaccharide-1-P 4'-kinase; TIGRFAM: tetraacyldisaccharide 4'-kinase; manually curated; tetraacyldisaccharide 4'-kinase 693555 10814970 Flexsi_0674 Flexistipes sinusarabici DSM 4947 tetraacyldisaccharide 4'-kinase YP_004602918.1 692635 D 717231 CDS YP_004602919.1 336322952 10814972 693979..695655 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: ddf:DEFDS_0342 rubrerythrin domain protein; SPTR: Rubrerythrin domain protein; transposase IS4 family protein 695655 10814972 Flexsi_0676 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602919.1 693979 D 717231 CDS YP_004602920.1 336322953 10814973 complement(695727..696011) 1 NC_015672.1 PFAM: Rubrerythrin; InterPro IPR003748; KEGG: hypothetical protein; PFAM: Protein of unknown function DUF169; SPTR: Putative uncharacterized protein; rubrerythrin domain-containing protein 696011 10814973 Flexsi_0677 Flexistipes sinusarabici DSM 4947 rubrerythrin domain-containing protein YP_004602920.1 695727 R 717231 CDS YP_004602921.1 336322954 10814974 complement(696126..696935) 1 NC_015672.1 PFAM: Uncharacterised ArCR, COG2043; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 696935 10814974 Flexsi_0678 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602921.1 696126 R 717231 CDS YP_004602922.1 336322955 10814975 complement(697032..698297) 1 NC_015672.1 InterPro IPR007272; KEGG: glo:Glov_1576 protein of unknown function DUF395 YeeE/YedE; PFAM: Protein of unknown function DUF395, YeeE/YedE; SPTR: Putative uncharacterized protein; transposase IS4 family protein 698297 10814975 Flexsi_0679 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602922.1 697032 R 717231 CDS YP_004602923.1 336322956 10814976 698531..699628 1 NC_015672.1 PFAM: YeeE/YedE family (DUF395); KEGG: gsu:GSU1054 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 699628 10814976 Flexsi_0680 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602923.1 698531 D 717231 CDS YP_004602924.1 336322957 10814977 699632..699868 1 NC_015672.1 PFAM: SirA-like protein; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR013767:IPR003594:IPR001789:IPR000014; KEGG: dal:Dalk_3513 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; hypothetical protein 699868 10814977 Flexsi_0681 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602924.1 699632 D 717231 CDS YP_004602925.1 336322958 10814978 699904..702327 1 NC_015672.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; PAS fold; TIGRFAM: PAS domain S-box; KEGG: ddf:DEFDS_1682 hypothetical protein; SPTR: Putative uncharacterized protein; PAS/PAC sensor hybrid histidine kinase 702327 10814978 Flexsi_0682 Flexistipes sinusarabici DSM 4947 PAS/PAC sensor hybrid histidine kinase YP_004602925.1 699904 D 717231 CDS YP_004602926.1 336322959 10814979 702502..703089 1 NC_015672.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2155); COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: ddf:DEFDS_0915 fumarate hydratase class I subunit beta; PFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase, class I, beta subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate beta region; hypothetical protein 703089 10814979 Flexsi_0683 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602926.1 702502 D 717231 CDS YP_004602927.1 336322960 10814980 complement(703133..703711) 1 NC_015672.1 PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: ddf:DEFDS_0916 fumarate hydratase class I subunit alpha; PFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase, class I, alpha subunit; TIGRFAM: Fe-S type hydro-lyases tartrate/fumarate alpha region; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 703711 10814980 Flexsi_0684 Flexistipes sinusarabici DSM 4947 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_004602927.1 703133 R 717231 CDS YP_004602928.1 336322961 10814981 complement(703704..704570) 1 NC_015672.1 PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; COGs: COG1049 Aconitase B; InterPro IPR015929:IPR001030:IPR004406; KEGG: ddf:DEFDS_0917 aconitate hydratase; PFAM: Aconitase B, N-terminal, bacterial; Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: Aconitate hydratase 2; TIGRFAM: Aconitase B, bacterial; Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha 704570 10814981 Flexsi_0685 Flexistipes sinusarabici DSM 4947 Fe-S type, tartrate/fumarate subfamily hydro-lyase subunit alpha YP_004602928.1 703704 R 717231 CDS YP_004602929.1 336322962 10814982 704759..707503 1 NC_015672.1 PFAM: Aconitate B N-terminal domain; Aconitase family (aconitate hydratase); Aconitate hydratase 2 N-terminus; TIGRFAM: aconitate hydratase 2; COGs: COG2838 Monomeric isocitrate dehydrogenase; InterPro IPR004436; KEGG: gsu:GSU1465 isocitrate dehydrogenase, NADP-dependent; PFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; PRIAM: Isocitrate dehydrogenase (NADP(+)); SPTR: Isocitrate dehydrogenase [NADP]; TIGRFAM: Isocitrate dehydrogenase NADP-dependent, monomeric type; aconitate hydratase 2 707503 10814982 Flexsi_0686 Flexistipes sinusarabici DSM 4947 aconitate hydratase 2 YP_004602929.1 704759 D 717231 CDS YP_004602930.1 336322963 10814983 707990..710233 1 NC_015672.1 PFAM: Monomeric isocitrate dehydrogenase; TIGRFAM: isocitrate dehydrogenase, NADP-dependent, monomeric type; COGs: COG0039 Malate/lactate dehydrogenase; HAMAP: Malate dehydrogenase, NAD-dependent; InterPro IPR001236:IPR011275; KEGG: ddf:DEFDS_0919 malate dehydrogenase; PFAM: Lactate/malate dehydrogenase; SPTR: Malate dehydrogenase; TIGRFAM: Malate dehydrogenase, NAD-dependent; isocitrate dehydrogenase 710233 10814983 Flexsi_0687 Flexistipes sinusarabici DSM 4947 isocitrate dehydrogenase YP_004602930.1 707990 D 717231 CDS YP_004602931.1 336322964 10814984 710302..711276 1 NC_015672.1 PFAM: lactate/malate dehydrogenase, alpha/beta C-terminal domain; lactate/malate dehydrogenase, NAD binding domain; TIGRFAM: malate dehydrogenase, NAD-dependent; COGs: COG0045 Succinyl-CoA synthetase beta subunit; HAMAP: Succinyl-CoA ligase [ADP-forming] subunit beta; InterPro IPR013650:IPR005811:IPR005809; KEGG: ddf:DEFDS_0920 succinyl-CoA synthase subunit beta; PFAM: ATP-grasp fold, succinyl-CoA synthetase-type; ATP-citrate lyase/succinyl-CoA ligase; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit beta; TIGRFAM: Succinyl-CoA synthetase, beta subunit; malate dehydrogenase 711276 10814984 Flexsi_0688 Flexistipes sinusarabici DSM 4947 malate dehydrogenase YP_004602931.1 710302 D 717231 CDS YP_004602932.1 336322965 10814985 711429..712604 1 NC_015672.1 PFAM: CoA-ligase; ATP-grasp domain; TIGRFAM: succinyl-CoA synthetase, beta subunit; COGs: COG0074 Succinyl-CoA synthetase alpha subunit; InterPro IPR003781:IPR005811:IPR005810; KEGG: ddf:DEFDS_0921 succinyl-CoA synthase subunit alpha; PFAM: ATP-citrate lyase/succinyl-CoA ligase; CoA-binding; PRIAM: Succinate--CoA ligase (ADP-forming); SPTR: Succinyl-CoA ligase [ADP-forming] subunit alpha; TIGRFAM: Succinyl-CoA ligase, alpha subunit; succinyl-CoA ligase subunit beta 712604 10814985 Flexsi_0689 Flexistipes sinusarabici DSM 4947 succinyl-CoA ligase subunit beta YP_004602932.1 711429 D 717231 CDS YP_004602933.1 336322966 10814986 712607..713479 1 NC_015672.1 PFAM: CoA binding domain; CoA-ligase; TIGRFAM: succinyl-CoA synthetase, alpha subunit; InterPro IPR001450; KEGG: ddf:DEFDS_0922 2-oxoglutarate ferredoxin oxidoreductase subunit delta; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, delta subunit; succinyl-CoA synthetase subunit alpha 713479 10814986 Flexsi_0690 Flexistipes sinusarabici DSM 4947 succinyl-CoA synthetase subunit alpha YP_004602933.1 712607 D 717231 CDS YP_004602934.1 336322967 10814987 713491..713691 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR002880; KEGG: ddf:DEFDS_0923 2-oxoglutarate ferredoxin oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, alpha subunit; 4Fe-4S ferredoxin 713691 10814987 Flexsi_0691 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004602934.1 713491 D 717231 CDS YP_004602935.1 336322968 10814988 713704..714840 1 NC_015672.1 PFAM: domain; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766; KEGG: ddf:DEFDS_0924 2-oxoglutarate ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, beta subunit; 2-oxoglutarate synthase 714840 10814988 Flexsi_0692 Flexistipes sinusarabici DSM 4947 2-oxoglutarate synthase YP_004602935.1 713704 D 717231 CDS YP_004602936.1 336322969 10814989 714841..715656 1 NC_015672.1 PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: ddf:DEFDS_0925 2-oxoglutarate ferredoxin oxidoreductase subunit gamma; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoglutarate ferredoxin oxidoreductase, gamma subunit; 2-oxoglutarate synthase 715656 10814989 Flexsi_0693 Flexistipes sinusarabici DSM 4947 2-oxoglutarate synthase YP_004602936.1 714841 D 717231 CDS YP_004602937.1 336322970 10814990 715659..716195 1 NC_015672.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family; InterPro IPR005631; KEGG: cni:Calni_0411 hypothetical protein; PFAM: Protein of unknown function DUF339; SPTR: Putative uncharacterized protein; 2-oxoglutarate synthase 716195 10814990 Flexsi_0694 Flexistipes sinusarabici DSM 4947 2-oxoglutarate synthase YP_004602937.1 715659 D 717231 CDS YP_004602938.1 336322971 10814991 716241..716534 1 NC_015672.1 PFAM: Protein of unknown function (DUF339); COGs: COG0479 Succinate dehydrogenase/fumarate reductase Fe-S protein subunit; InterPro IPR004489; KEGG: ddf:DEFDS_0685 succinate dehydrogenase iron-sulfur protein; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Succinate dehydrogenase, iron-sulfur protein; TIGRFAM: Succinate dehydrogenase/fumarate reductase iron-sulphur protein; hypothetical protein 716534 10814991 Flexsi_0695 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602938.1 716241 D 717231 CDS YP_004602939.1 336322972 10814992 complement(716785..717495) 1 NC_015672.1 TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein; COGs: COG1053 Succinate dehydrogenase/fumarate reductase flavoprotein subunit; InterPro IPR003953:IPR004112:IPR011281:IPR014006; KEGG: ddf:DEFDS_0686 succinate dehydrogenase flavoprotein subunit; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: Succinate dehydrogenase (ubiquinone); SPTR: Succinate dehydrogenase, flavoprotein subunit; TIGRFAM: Succinate dehydrogenase, flavoprotein subunit; Succinate dehydrogenase/fumarate reductase, flavoprotein subunit; succinate dehydrogenase and fumarate reductase iron-sulfur protein 717495 10814992 Flexsi_0696 Flexistipes sinusarabici DSM 4947 succinate dehydrogenase and fumarate reductase iron-sulfur protein YP_004602939.1 716785 R 717231 CDS YP_004602940.1 336322973 10814993 complement(717512..719281) 1 NC_015672.1 PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup; succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup; KEGG: ddf:DEFDS_0687 succinate dehydrogenase hydrophobic membrane anchor protein; SPTR: Succinate dehydrogenase, hydrophobic membrane anchor protein; succinate dehydrogenase, flavoprotein subunit 719281 10814993 Flexsi_0697 Flexistipes sinusarabici DSM 4947 succinate dehydrogenase, flavoprotein subunit YP_004602940.1 717512 R 717231 CDS YP_004602941.1 336322974 10814994 complement(719307..719624) 1 NC_015672.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; InterPro IPR014314; KEGG: ddf:DEFDS_0688 succinate dehydrogenase cytochrome b subunit; SPTR: Succinate dehydrogenase, cytochrome b subunit; TIGRFAM: Succinate dehydrogenase, cytochrome b556 subunit; succinate dehydrogenase hydrophobic membrane anchor protein 719624 10814994 Flexsi_0698 Flexistipes sinusarabici DSM 4947 succinate dehydrogenase hydrophobic membrane anchor protein YP_004602941.1 719307 R 717231 CDS YP_004602942.1 336322975 10814995 complement(719636..719989) 1 NC_015672.1 PFAM: Succinate dehydrogenase/Fumarate reductase transmembrane subunit; TIGRFAM: succinate dehydrogenase, cytochrome b556 subunit; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; succinate dehydrogenase, cytochrome b556 subunit 719989 10814995 Flexsi_0699 Flexistipes sinusarabici DSM 4947 succinate dehydrogenase, cytochrome b556 subunit YP_004602942.1 719636 R 717231 CDS YP_004602943.1 336322976 10814996 720662..721927 1 NC_015672.1 InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 721927 10814996 Flexsi_0700 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602943.1 720662 D 717231 CDS YP_004602944.1 336322977 10814997 722083..723402 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0513 Superfamily II DNA and RNA helicase; InterPro IPR011545:IPR001650:IPR005580:IPR014001; KEGG: cni:Calni_1003 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; DbpA, RNA-binding; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; transposase IS4 family protein 723402 10814997 Flexsi_0701 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602944.1 722083 D 717231 CDS YP_004602945.1 336322978 10814998 723689..725272 1 NC_015672.1 PFAM: Helicase conserved C-terminal domain; DbpA RNA binding domain; DEAD/DEAH box helicase; COGs: COG0288 Carbonic anhydrase; InterPro IPR001765; KEGG: carbonate dehydratase; PFAM: Carbonic anhydrase; PRIAM: Carbonate dehydratase; SPTR: Carbonate dehydratase; DEAD/DEAH box helicase 725272 10814998 Flexsi_0702 Flexistipes sinusarabici DSM 4947 DEAD/DEAH box helicase YP_004602945.1 723689 D 717231 CDS YP_004602946.1 336322979 10814999 725285..725902 1 NC_015672.1 PFAM: Carbonic anhydrase; COGs: COG3884 Acyl-ACP thioesterase; InterPro IPR002864; KEGG: cni:Calni_1199 acyl-acp thioesterase; PFAM: Acyl-ACP thioesterase; SPTR: Acyl-ACP thioesterase; carbonate dehydratase 725902 10814999 Flexsi_0703 Flexistipes sinusarabici DSM 4947 carbonate dehydratase YP_004602946.1 725285 D 717231 CDS YP_004602947.1 336322980 10815000 725905..726627 1 NC_015672.1 PFAM: Acyl-ACP thioesterase; acyl-ACP thioesterase 726627 10815000 Flexsi_0704 Flexistipes sinusarabici DSM 4947 acyl-ACP thioesterase YP_004602947.1 725905 D 717231 CDS YP_004602948.1 336322981 10815001 complement(726659..726760) 1 NC_015672.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_1137 hypothetical protein; PFAM: Glycosyl transferase, group 1; SPTR: Putative uncharacterized protein; hypothetical protein 726760 10815001 Flexsi_0705 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602948.1 726659 R 717231 CDS YP_004602949.1 336322982 10815002 complement(727572..728840) 1 NC_015672.1 PFAM: Glycosyl transferases group 1; InterPro IPR001296; KEGG: ddf:DEFDS_1138 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; group 1 glycosyl transferase 728840 10815002 Flexsi_0706 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602949.1 727572 R 717231 CDS YP_004602950.1 336322983 10815003 complement(728842..730113) 1 NC_015672.1 PFAM: Glycosyl transferases group 1; COGs: COG0662 Mannose-6-phosphate isomerase; InterPro IPR001538; KEGG: tba:TERMP_00025 mannose-1-phosphate guanylyltransferase; PFAM: Mannose-6-phosphate isomerase, type II, C-terminal; SPTR: Putative uncharacterized protein; group 1 glycosyl transferase 730113 10815003 Flexsi_0707 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004602950.1 728842 R 717231 CDS YP_004602951.1 336322984 10815004 complement(730106..730471) 1 NC_015672.1 PFAM: Mannose-6-phosphate isomerase; COGs: COG1237 Metal-dependent hydrolase of the beta-lactamase superfamily II; KEGG: cni:Calni_0784 beta-lactamase domain protein; SPTR: Beta-lactamase domain protein; mannose-6-phosphate isomerase 730471 10815004 Flexsi_0708 Flexistipes sinusarabici DSM 4947 mannose-6-phosphate isomerase YP_004602951.1 730106 R 717231 CDS YP_004602952.1 336322985 10815005 complement(730496..731311) 1 NC_015672.1 PFAM: Metallo-beta-lactamase superfamily; InterPro IPR018961; KEGG: ddf:DEFDS_0621 hypothetical protein; PFAM: DnaJ homologue, subfamily C, member 28, conserved domain; SPTR: Putative uncharacterized protein; beta-lactamase domain-containing protein 731311 10815005 Flexsi_0709 Flexistipes sinusarabici DSM 4947 beta-lactamase domain-containing protein YP_004602952.1 730496 R 717231 CDS YP_004602953.1 336322986 10815006 complement(731315..731686) 1 NC_015672.1 PFAM: Domain of unknown function (DUF1992); COGs: COG1802 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: ddf:DEFDS_1852 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; DnaJ domain-containing protein 731686 10815006 Flexsi_0710 Flexistipes sinusarabici DSM 4947 DnaJ domain-containing protein YP_004602953.1 731315 R 717231 CDS YP_004602954.1 336322987 10815007 731757..732458 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG1509 Lysine 2 3-aminomutase; InterPro IPR007197:IPR003739; KEGG: mmh:Mmah_0483 L-lysine 2,3-aminomutase; PFAM: Radical SAM; PRIAM: Lysine 2,3-aminomutase; SPTR: L-lysine 2,3-aminomutase; TIGRFAM: Protein of unknown function DUF160; GntR family transcriptional regulator 732458 10815007 Flexsi_0711 Flexistipes sinusarabici DSM 4947 GntR family transcriptional regulator YP_004602954.1 731757 D 717231 CDS YP_004602955.1 336322988 10815008 732479..733555 1 NC_015672.1 PFAM: Lysine-2,3-aminomutase; TIGRFAM: KamA family protein; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146; KEGG: tac:Ta1498 glutamine synthetase; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; PRIAM: Glutamate--ammonia ligase; SPTR: Probable glutamine synthetase; lysine 2,3-aminomutase YodO family protein 733555 10815008 Flexsi_0712 Flexistipes sinusarabici DSM 4947 lysine 2,3-aminomutase YodO family protein YP_004602955.1 732479 D 717231 CDS YP_004602956.1 336322989 10815009 733762..735078 1 NC_015672.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; COGs: COG0044 Dihydroorotase and related cyclic amidohydrolase; InterPro IPR006680:IPR004722; KEGG: cni:Calni_0901 dihydroorotase; PFAM: Amidohydrolase 1; PRIAM: Dihydroorotase; SPTR: Dihydroorotase; TIGRFAM: Dihydroorotase multifunctional complex type; glutamate--ammonia ligase 735078 10815009 Flexsi_0713 Flexistipes sinusarabici DSM 4947 glutamate--ammonia ligase YP_004602956.1 733762 D 717231 CDS YP_004602957.1 336322990 10815010 complement(735678..736949) 1 NC_015672.1 PFAM: Amidohydrolase family; TIGRFAM: dihydroorotase, multifunctional complex type; COGs: COG0540 Aspartate carbamoyltransferase catalytic chain; HAMAP: Aspartate carbamoyltransferase; InterPro IPR006132:IPR006131:IPR002082; KEGG: ddf:DEFDS_0841 aspartate carbamoyltransferase catalytic subunit; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; PRIAM: Aspartate carbamoyltransferase; SPTR: Aspartate carbamoyltransferase; TIGRFAM: Aspartate carbamoyltransferase, eukaryotic; dihydroorotase, multifunctional complex type 736949 10815010 Flexsi_0714 Flexistipes sinusarabici DSM 4947 dihydroorotase, multifunctional complex type YP_004602957.1 735678 R 717231 CDS YP_004602958.1 336322991 10815011 complement(736949..737878) 1 NC_015672.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: aspartate carbamoyltransferase; COGs: COG2065 Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase; HAMAP: Bifunctional protein pyrR; InterPro IPR000836; KEGG: ddf:DEFDS_0842 bifunctional pyrimidine biosynthesis protein PyrR; PFAM: Phosphoribosyltransferase; PRIAM: Uracil phosphoribosyltransferase; SPTR: Bifunctional protein pyrR; aspartate carbamoyltransferase 737878 10815011 Flexsi_0715 Flexistipes sinusarabici DSM 4947 aspartate carbamoyltransferase YP_004602958.1 736949 R 717231 CDS YP_004602959.1 336322992 10815012 complement(737881..738459) 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR002932; KEGG: glutamate synthase (NADPH) GltB2 subunit; PFAM: Glutamate synthase, central-C; SPTR: Ferredoxin-dependent glutamate synthase; bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase 738459 10815012 Flexsi_0716 Flexistipes sinusarabici DSM 4947 bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase YP_004602959.1 737881 R 717231 CDS YP_004602960.1 336322993 10815013 738867..740504 1 NC_015672.1 PFAM: Conserved region in glutamate synthase; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; ferredoxin-dependent glutamate synthase 740504 10815013 Flexsi_0717 Flexistipes sinusarabici DSM 4947 ferredoxin-dependent glutamate synthase YP_004602960.1 738867 D 717231 CDS YP_004602961.1 336322994 10815014 complement(740576..741943) 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005671; KEGG: ddf:DEFDS_1662 2-isopropylmalate synthase; PFAM: Pyruvate carboxyltransferase; 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; PRIAM: 2-isopropylmalate synthase; SPTR: 2-isopropylmalate synthase; TIGRFAM: Bacterial 2-isopropylmalate synthase; transposase IS4 family protein 741943 10815014 Flexsi_0718 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602961.1 740576 R 717231 CDS YP_004602962.1 336322995 10815015 complement(742089..743642) 1 NC_015672.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase, bacterial type; COGs: COG1183 Phosphatidylserine synthase; InterPro IPR000462:IPR004533; KEGG: cni:Calni_0491 cdp-diacylglycerol--serine O-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--serine O-phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; 2-isopropylmalate synthase 743642 10815015 Flexsi_0719 Flexistipes sinusarabici DSM 4947 2-isopropylmalate synthase YP_004602962.1 742089 R 717231 CDS YP_004602963.1 336322996 10815016 complement(743732..744460) 1 NC_015672.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--serine O-phosphatidyltransferase; COGs: COG0688 Phosphatidylserine decarboxylase; HAMAP: Phosphatidylserine decarboxylase proenzyme; InterPro IPR003817:IPR004428; KEGG: ddf:DEFDS_1664 phosphatidylserine decarboxylase; PFAM: Phosphatidylserine decarboxylase-related; PRIAM: Phosphatidylserine decarboxylase; SPTR: Phosphatidylserine decarboxylase; TIGRFAM: Phosphatidylserine decarboxylase-related protein; CDP-diacylglycerol/serine O-phosphatidyltransferase 744460 10815016 Flexsi_0720 Flexistipes sinusarabici DSM 4947 CDP-diacylglycerol/serine O-phosphatidyltransferase YP_004602963.1 743732 R 717231 CDS YP_004602964.1 336322997 10815017 complement(744461..745078) 1 NC_015672.1 PFAM: Phosphatidylserine decarboxylase; TIGRFAM: phosphatidylserine decarboxylase precursor-related protein; manually curated; phosphatidylserine decarboxylase proenzyme 745078 10815017 Flexsi_0721 Flexistipes sinusarabici DSM 4947 phosphatidylserine decarboxylase proenzyme YP_004602964.1 744461 R 717231 CDS YP_004602965.1 336322998 10815019 746616..747665 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); transposase IS4 family protein 747665 10815019 Flexsi_0723 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602965.1 746616 D 717231 CDS YP_004602966.1 336322999 10815020 complement(747829..748017) 1 NC_015672.1 COGs: COG0059 Ketol-acid reductoisomerase; HAMAP: Ketol-acid reductoisomerase; InterPro IPR013116:IPR000506:IPR013023; KEGG: ddf:DEFDS_1665 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase, catalytic; Acetohydroxy acid isomeroreductase C-terminal; PRIAM: Ketol-acid reductoisomerase; SPTR: Ketol-acid reductoisomerase; TIGRFAM: Acetohydroxy acid isomeroreductase; hypothetical protein 748017 10815020 Flexsi_0724 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602966.1 747829 R 717231 CDS YP_004602967.1 336323000 10815021 complement(748361..749377) 1 NC_015672.1 PFAM: Acetohydroxy acid isomeroreductase, catalytic domain; TIGRFAM: ketol-acid reductoisomerase; COGs: COG0440 Acetolactate synthase small (regulatory) subunit; InterPro IPR002912:IPR019455:IPR004789; KEGG: ddf:DEFDS_1666 acetolactate synthase small subunit; PFAM: Acetolactate synthase, small subunit, C-terminal; Amino acid-binding ACT; SPTR: Acetolactate synthase, small subunit; TIGRFAM: Acetolactate synthase, small subunit; ketol-acid reductoisomerase 749377 10815021 Flexsi_0725 Flexistipes sinusarabici DSM 4947 ketol-acid reductoisomerase YP_004602967.1 748361 R 717231 CDS YP_004602968.1 336323001 10815022 complement(749387..749899) 1 NC_015672.1 PFAM: ACT domain; Small subunit of acetolactate synthase; TIGRFAM: acetolactate synthase, small subunit; COGs: COG0028 Thiamine pyrophosphate-requiring protein; InterPro IPR012001:IPR012000:IPR011766:IPR012846; KEGG: ddf:DEFDS_1667 acetolactate synthase large subunit; PFAM: Thiamine pyrophosphate enzyme, N-terminal TPP binding region; Thiamine pyrophosphate enzyme, central region; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Acetolactate synthase; SPTR: Acetolactate synthase; TIGRFAM: Acetolactate synthase, large subunit, biosynthetic; acetolactate synthase small subunit 749899 10815022 Flexsi_0726 Flexistipes sinusarabici DSM 4947 acetolactate synthase small subunit YP_004602968.1 749387 R 717231 CDS YP_004602969.1 336323002 10815023 complement(749903..751603) 1 NC_015672.1 PFAM: Thiamine pyrophosphate enzyme, central domain; Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; HAMAP: Dihydroxy-acid dehydratase; InterPro IPR000581:IPR004404; KEGG: ddf:DEFDS_1668 dihydroxy-acid dehydratase; PFAM: Dihydroxy-acid/6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: Dihydroxy-acid dehydratase; acetolactate synthase large subunit 751603 10815023 Flexsi_0727 Flexistipes sinusarabici DSM 4947 acetolactate synthase large subunit YP_004602969.1 749903 R 717231 CDS YP_004602970.1 336323003 10815024 complement(751626..753281) 1 NC_015672.1 PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; InterPro IPR002514; KEGG: kol:Kole_0767 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911; SPTR: Putative uncharacterized protein; dihydroxy-acid dehydratase 753281 10815024 Flexsi_0728 Flexistipes sinusarabici DSM 4947 dihydroxy-acid dehydratase YP_004602970.1 751626 R 717231 CDS YP_004602971.1 336323004 10815025 753902..754210 1 NC_015672.1 PFAM: Transposase; InterPro IPR001584; KEGG: ppd:Ppro_1841 integrase catalytic subunit; PFAM: Integrase, catalytic core; SPTR: Integrase, catalytic region; transposase IS3/IS911 family protein 754210 10815025 Flexsi_0729 Flexistipes sinusarabici DSM 4947 transposase IS3/IS911 family protein YP_004602971.1 753902 D 717231 CDS YP_004602972.1 336323005 10815026 754267..755196 1 NC_015672.1 PFAM: Integrase core domain; COGs: COG0449 Glucosamine 6-phosphate synthetase contains amidotransferase and phosphosugar isomerase domains; InterPro IPR000583; KEGG: tcx:Tcr_1692 glucosamine--fructose-6-phosphate aminotransferase, isomerizing; PFAM: Glutamine amidotransferase, class-II; PRIAM: Glutamine--fructose-6-phosphate transaminase (isomerizing); SPTR: Glutamine--fructose-6-phosphate transaminase; integrase catalytic subunit 755196 10815026 Flexsi_0730 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004602972.1 754267 D 717231 CDS YP_004602973.1 336323006 10815027 755285..755872 1 NC_015672.1 PFAM: Glutamine amidotransferases class-II; This gene is disrupted by insertion of repetitive element; manually curated; glutamine--fructose-6-phosphate transaminase 755872 10815027 Flexsi_0731 Flexistipes sinusarabici DSM 4947 glutamine--fructose-6-phosphate transaminase YP_004602973.1 755285 D 717231 CDS YP_004602974.1 336323007 10815029 756691..757740 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: mac:MA2579 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase, IS21; transposase IS4 family protein 757740 10815029 Flexsi_0733 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602974.1 756691 D 717231 CDS YP_004602975.1 336323008 10815030 complement(758065..759309) 1 NC_015672.1 PFAM: Integrase core domain; manually curated; integrase catalytic subunit 759309 10815030 Flexsi_0734 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004602975.1 758065 R 717231 CDS YP_004602976.1 336323009 10815032 complement(761088..762137) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein 762137 10815032 Flexsi_0736 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602976.1 761088 R 717231 CDS YP_004602977.1 336323010 10815034 complement(762746..763432) 1 NC_015672.1 PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; IstB domain-containing protein ATP-binding protein 763432 10815034 Flexsi_0738 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004602977.1 762746 R 717231 CDS YP_004602978.1 336323011 10815035 complement(763419..764942) 1 NC_015672.1 PFAM: Integrase core domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; integrase catalytic subunit 764942 10815035 Flexsi_0739 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004602978.1 763419 R 717231 CDS YP_004602979.1 336323012 10815036 765112..765828 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG1596 Periplasmic protein involved in polysaccharide export; InterPro IPR019554; KEGG: sat:SYN_02695 polysaccharide export periplasmic protein; PFAM: Soluble ligand binding domain; SPTR: Periplasmic protein involved in polysaccharide export; transposase IS4 family protein 765828 10815036 Flexsi_0740 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004602979.1 765112 D 717231 CDS YP_004602980.1 336323013 10815037 765928..768900 1 NC_015672.1 PFAM: SLBB-domain like (DUF1017); Polysaccharide biosynthesis/export protein; SLBB domain; InterPro IPR003856; KEGG: svo:SVI_1467 chain length determinant protein; PFAM: Lipopolysaccharide biosynthesis; SPTR: Chain length determinant protein; soluble ligand binding domain-containing protein 768900 10815037 Flexsi_0741 Flexistipes sinusarabici DSM 4947 soluble ligand binding domain-containing protein YP_004602980.1 765928 D 717231 CDS YP_004602981.1 336323014 10815038 768908..769822 1 NC_015672.1 PFAM: Chain length determinant protein; KEGG: nde:NIDE0888 hypothetical protein; SPTR: Putative uncharacterized protein; lipopolysaccharide biosynthesis protein 769822 10815038 Flexsi_0742 Flexistipes sinusarabici DSM 4947 lipopolysaccharide biosynthesis protein YP_004602981.1 768908 D 717231 CDS YP_004602982.1 336323015 10815039 769819..771333 1 NC_015672.1 COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: dap:Dacet_2770 glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyl transferase, family 4, conserved region; hypothetical protein 771333 10815039 Flexsi_0743 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602982.1 769819 D 717231 CDS YP_004602983.1 336323016 10815040 complement(771344..772942) 1 NC_015672.1 PFAM: Glycosyl transferase family 4; InterPro IPR007165; KEGG: ddf:DEFDS_0628 hypothetical protein; PFAM: Membrane protein of unknown function; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 772942 10815040 Flexsi_0744 Flexistipes sinusarabici DSM 4947 glycosyl transferase family protein YP_004602983.1 771344 R 717231 CDS YP_004602984.1 336323017 10815041 773319..773705 1 NC_015672.1 PFAM: Membrane protein of unknown function; KEGG: cni:Calni_0841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 773705 10815041 Flexsi_0745 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602984.1 773319 D 717231 CDS YP_004602985.1 336323018 10815042 773687..774169 1 NC_015672.1 COGs: COG4517 conserved hypothetical protein; InterPro IPR014949; KEGG: ddf:DEFDS_0630 hypothetical protein; PFAM: Protein of unknown function DUF1820; SPTR: Putative uncharacterized protein; hypothetical protein 774169 10815042 Flexsi_0746 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602985.1 773687 D 717231 CDS YP_004602986.1 336323019 10815043 774166..774447 1 NC_015672.1 PFAM: Domain of unknown function (DUF1820); COGs: COG0795 permease; InterPro IPR005495; KEGG: ddf:DEFDS_0631 hypothetical protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Putative uncharacterized protein; hypothetical protein 774447 10815043 Flexsi_0747 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602986.1 774166 D 717231 CDS YP_004602987.1 336323020 10815044 774444..775481 1 NC_015672.1 PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0795 permease; InterPro IPR005495; KEGG: dap:Dacet_1505 permease YjgP/YjgQ family protein; PFAM: Permease YjgP/YjgQ, predicted; SPTR: Permease YjgP/YjgQ family protein; YjgP/YjgQ family permease 775481 10815044 Flexsi_0748 Flexistipes sinusarabici DSM 4947 YjgP/YjgQ family permease YP_004602987.1 774444 D 717231 CDS YP_004602988.1 336323021 10815045 775478..776563 1 NC_015672.1 PFAM: Predicted permease YjgP/YjgQ family; COGs: COG0473 Isocitrate/isopropylmalate dehydrogenase; HAMAP: Isopropylmalate dehydrogenase; InterPro IPR001804:IPR004429; KEGG: ddf:DEFDS_0681 3-isopropylmalate dehydrogenase; PFAM: Isocitrate/isopropylmalate dehydrogenase; PRIAM: 3-isopropylmalate dehydrogenase; SPTR: 3-isopropylmalate dehydrogenase; TIGRFAM: Isopropylmalate dehydrogenase; YjgP/YjgQ family permease 776563 10815045 Flexsi_0749 Flexistipes sinusarabici DSM 4947 YjgP/YjgQ family permease YP_004602988.1 775478 D 717231 CDS YP_004602989.1 336323022 10815046 776671..777747 1 NC_015672.1 PFAM: Isocitrate/isopropylmalate dehydrogenase; TIGRFAM: 3-isopropylmalate dehydrogenase; COGs: COG1139 conserved hypothetical protein containing a ferredoxin-like domain; InterPro IPR003741:IPR001450:IPR004017; KEGG: cni:Calni_1714 hypothetical protein; PFAM: Protein of unknown function DUF162; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Cysteine-rich region, CCG; SPTR: Putative uncharacterized protein; 3-isopropylmalate dehydrogenase 777747 10815046 Flexsi_0750 Flexistipes sinusarabici DSM 4947 3-isopropylmalate dehydrogenase YP_004602989.1 776671 D 717231 CDS YP_004602990.1 336323023 10815047 complement(777925..780057) 1 NC_015672.1 PFAM: Cysteine-rich domain; Uncharacterised ACR, YkgG family COG1556; TIGRFAM: iron-sulfur cluster-binding protein; COGs: COG1556 conserved hypothetical protein; InterPro IPR003741; KEGG: ddf:DEFDS_1348 hypothetical protein; PFAM: Protein of unknown function DUF162; SPTR: Putative uncharacterized protein; lactate utilization protein B/C 780057 10815047 Flexsi_0751 Flexistipes sinusarabici DSM 4947 lactate utilization protein B/C YP_004602990.1 777925 R 717231 CDS YP_004602991.1 336323024 10815048 complement(780066..780539) 1 NC_015672.1 PFAM: Uncharacterised ACR, YkgG family COG1556; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: cni:Calni_1350 extracellular solute-binding protein, family 7; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; lactate utilization protein B/C 780539 10815048 Flexsi_0752 Flexistipes sinusarabici DSM 4947 lactate utilization protein B/C YP_004602991.1 780066 R 717231 CDS YP_004602992.1 336323025 10815049 780805..781890 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: cni:Calni_1351 tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; family 7 extracellular solute-binding protein 781890 10815049 Flexsi_0753 Flexistipes sinusarabici DSM 4947 family 7 extracellular solute-binding protein YP_004602992.1 780805 D 717231 CDS YP_004602993.1 336323026 10815050 782103..782612 1 NC_015672.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: cni:Calni_1352 trap dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 782612 10815050 Flexsi_0754 Flexistipes sinusarabici DSM 4947 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004602993.1 782103 D 717231 CDS YP_004602994.1 336323027 10815051 782602..783924 1 NC_015672.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113; KEGG: cni:Calni_1348 fad linked oxidase domain protein; PFAM: FAD-linked oxidase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; TRAP dicarboxylate transporter subunit DctM 783924 10815051 Flexsi_0755 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctM YP_004602994.1 782602 D 717231 CDS YP_004602995.1 336323028 10815052 783936..785309 1 NC_015672.1 PFAM: FAD binding domain; FAD linked oxidases, C-terminal domain; TIGRFAM: glycolate oxidase, subunit GlcD; COGs: COG0247 Fe-S oxidoreductase; InterPro IPR001450:IPR004017; KEGG: cni:Calni_1349 hypothetical protein; PFAM: Cysteine-rich region, CCG; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; D-lactate dehydrogenase 785309 10815052 Flexsi_0756 Flexistipes sinusarabici DSM 4947 D-lactate dehydrogenase YP_004602995.1 783936 D 717231 CDS YP_004602996.1 336323029 10815053 785311..786564 1 NC_015672.1 PFAM: Cysteine-rich domain; COGs: COG2186 Transcriptional regulators; InterPro IPR000524:IPR011711; KEGG: cni:Calni_1712 transcriptional regulator, GntR family; PFAM: HTH transcriptional regulator, GntR; GntR, C-terminal; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family; hypothetical protein 786564 10815053 Flexsi_0757 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004602996.1 785311 D 717231 CDS YP_004602997.1 336323030 10815054 786533..787267 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462; KEGG: sul:SYO3AOP1_0595 CDP-alcohol phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; regulatory protein GntR 787267 10815054 Flexsi_0758 Flexistipes sinusarabici DSM 4947 regulatory protein GntR YP_004602997.1 786533 D 717231 CDS YP_004602998.1 336323031 10815055 787440..788018 1 NC_015672.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterProIPR002880:IPR019752:IPR019456:IPR001450:IPR 011766:IPR011895; KEGG: ddf:DEFDS_0568 pyruvate:ferredoxin oxidoreductase; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; Pyruvate-flavodoxin oxidoreductase, EKR domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: Pyruvate dehydrogenase (NADP(+)); SPTR: Pyruvate-flavodoxin oxidoreductase; TIGRFAM: Pyruvate-flavodoxin oxidoreductase; CDP-alcohol phosphatidyltransferase 788018 10815055 Flexsi_0759 Flexistipes sinusarabici DSM 4947 CDP-alcohol phosphatidyltransferase YP_004602998.1 787440 D 717231 CDS YP_004602999.1 336323032 10815056 complement(788417..791998) 1 NC_015672.1 PFAM: domain; Domain of unknown function; Pyruvate ferredoxin/flavodoxin oxidoreductase; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: ddf:DEFDS_0569 acyl-CoA synthase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Acyl-CoA synthase; pyruvate ferredoxin/flavodoxin oxidoreductase 791998 10815056 Flexsi_0760 Flexistipes sinusarabici DSM 4947 pyruvate ferredoxin/flavodoxin oxidoreductase YP_004602999.1 788417 R 717231 CDS YP_004603000.1 336323033 10815057 792502..794160 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: dap:Dacet_1688 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; long-chain-fatty-acid--CoA ligase 794160 10815057 Flexsi_0761 Flexistipes sinusarabici DSM 4947 long-chain-fatty-acid--CoA ligase YP_004603000.1 792502 D 717231 CDS YP_004603001.1 336323034 10815058 794787..795125 1 NC_015672.1 PFAM: Nitrogen regulatory protein P-II; COGs: COG0174 Glutamine synthetase; InterPro IPR008147:IPR008146:IPR004809; KEGG: ddf:DEFDS_1474 glutamine synthetase type I; PFAM: Glutamine synthetase, catalytic region; Glutamine synthetase, beta-Grasp; SPTR: Glutamine synthetase; TIGRFAM: Glutamine synthetase type I; nitrogen regulatory protein P-II 795125 10815058 Flexsi_0762 Flexistipes sinusarabici DSM 4947 nitrogen regulatory protein P-II YP_004603001.1 794787 D 717231 CDS YP_004603002.1 336323035 10815059 795159..796571 1 NC_015672.1 PFAM: Glutamine synthetase, catalytic domain; Glutamine synthetase, beta-Grasp domain; TIGRFAM: glutamine synthetase, type I; glutamine synthetase, type I 796571 10815059 Flexsi_0763 Flexistipes sinusarabici DSM 4947 glutamine synthetase, type I YP_004603002.1 795159 D 717231 CDS YP_004603003.1 336323036 10815061 797408..797995 1 NC_015672.1 PFAM: CheD; manually curated; protein CheD 797995 10815061 Flexsi_0764 Flexistipes sinusarabici DSM 4947 protein CheD YP_004603003.1 797408 D 717231 CDS YP_004603004.1 336323037 10815063 798587..804616 1 NC_015672.1 PFAM: Response regulator receiver domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; NMT1/THI5 like; Hpt domain; TIGRFAM: PAS domain S-box; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789:IPR000160; KEGG: hha:Hhal_0365 response regulator receiver modulated diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; multi-sensor hybrid histidine kinase 804616 10815063 Flexsi_0766 Flexistipes sinusarabici DSM 4947 multi-sensor hybrid histidine kinase YP_004603004.1 798587 D 717231 CDS YP_004603005.1 336323038 10815064 804619..805599 1 NC_015672.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR001789:IPR013767:IPR003661:IPR003594:IPR 000014:IPR001610; KEGG: signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction response regulator, receiver region; PAS; PAC motif; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; ATP-binding region, ATPase-like; SPTR: Putative uncharacterized protein; TIGRFAM: PAS; response regulator receiver modulated diguanylate cyclase 805599 10815064 Flexsi_0767 Flexistipes sinusarabici DSM 4947 response regulator receiver modulated diguanylate cyclase YP_004603005.1 804619 D 717231 CDS YP_004603006.1 336323039 10815065 805602..807524 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; InterPro IPR012912; KEGG: xbo:XBJ1_3617 hypothetical protein; PFAM: Plasmid pRiA4b ORF-3-like; SPTR: Putative uncharacterized protein; multi-sensor hybrid histidine kinase 807524 10815065 Flexsi_0768 Flexistipes sinusarabici DSM 4947 multi-sensor hybrid histidine kinase YP_004603006.1 805602 D 717231 CDS YP_004603007.1 336323040 10815066 808243..809526 1 NC_015672.1 PFAM: Plasmid pRiA4b ORF-3-like protein; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; plasmid pRiA4b ORF-3 family protein 809526 10815066 Flexsi_0769 Flexistipes sinusarabici DSM 4947 plasmid pRiA4b ORF-3 family protein YP_004603007.1 808243 D 717231 CDS YP_004603008.1 336323041 10815067 809945..810994 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG2186 Transcriptional regulators; InterPro IPR000524; KEGG: dal:Dalk_0697 regulatory protein GntR HTH; PFAM: HTH transcriptional regulator, GntR; SMART: HTH transcriptional regulator, GntR; SPTR: Regulatory protein GntR HTH; transposase IS4 family protein 810994 10815067 Flexsi_0770 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603008.1 809945 D 717231 CDS YP_004603009.1 336323042 10815068 811724..812503 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; FCD domain; COGs: COG2303 Choline dehydrogenase and related flavoprotein; InterPro IPR000172:IPR007867:IPR011533; KEGG: drt:Dret_0130 choline dehydrogenase; PFAM: Glucose-methanol-choline oxidoreductase, N-terminal; Glucose-methanol-choline oxidoreductase, C-terminal; PRIAM: Choline dehydrogenase; SPTR: Choline dehydrogenase; TIGRFAM: Choline dehydrogenase; regulatory protein GntR 812503 10815068 Flexsi_0771 Flexistipes sinusarabici DSM 4947 regulatory protein GntR YP_004603009.1 811724 D 717231 CDS YP_004603010.1 336323043 10815069 812531..814174 1 NC_015672.1 PFAM: GMC oxidoreductase; TIGRFAM: choline dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590:IPR011264; KEGG: drt:Dret_0129 betaine aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: Betaine-aldehyde dehydrogenase; SPTR: Glycine betaine aldehyde dehydrogenase; TIGRFAM: Betaine aldehyde dehydrogenase; choline dehydrogenase 814174 10815069 Flexsi_0772 Flexistipes sinusarabici DSM 4947 choline dehydrogenase YP_004603010.1 812531 D 717231 CDS YP_004603011.1 336323044 10815070 814190..815662 1 NC_015672.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: glycine betaine aldehyde dehydrogenase; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: drt:Dret_0128 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; betaine aldehyde dehydrogenase 815662 10815070 Flexsi_0773 Flexistipes sinusarabici DSM 4947 betaine aldehyde dehydrogenase YP_004603011.1 814190 D 717231 CDS YP_004603012.1 336323045 10815071 815759..816721 1 NC_015672.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; TIGRFAM: choline ABC transporter, periplasmic binding protein; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197:IPR012840; KEGG: ddf:DEFDS_1634 anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM; SPTR: Anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic-like; glycine betaine ABC transporter periplasmic subunit 816721 10815071 Flexsi_0774 Flexistipes sinusarabici DSM 4947 glycine betaine ABC transporter periplasmic subunit YP_004603012.1 815759 D 717231 CDS YP_004603013.1 336323046 10815072 complement(816824..817564) 1 NC_015672.1 PFAM: Radical SAM superfamily; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; KEGG: rsd:TGRD_582 putative ribonucleoside-triphosphate reductase; SPTR: Putative ribonucleoside-triphosphate reductase; anaerobic ribonucleoside-triphosphate reductase activating protein 817564 10815072 Flexsi_0775 Flexistipes sinusarabici DSM 4947 anaerobic ribonucleoside-triphosphate reductase activating protein YP_004603013.1 816824 R 717231 CDS YP_004603014.1 336323047 10815073 complement(817724..817933) 1 NC_015672.1 COGs: COG1328 Oxygen-sensitive ribonucleoside-triphosphate reductase; InterPro IPR005144:IPR012833; KEGG: anaerobic ribonucleoside-triphosphate reductase; PFAM: ATP-cone; SPTR: Anaerobic ribonucleoside-triphosphate reductase; TIGRFAM: Ribonucleoside-triphosphate reductase, anaerobic; hypothetical protein 817933 10815073 Flexsi_0776 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603014.1 817724 R 717231 CDS YP_004603015.1 336323048 10815074 complement(818183..820231) 1 NC_015672.1 PFAM: ATP cone domain; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR013196:IPR004143; KEGG: chy:CHY_2371 BirA bifunctional protein; SPTR: BirA bifunctional protein; anaerobic ribonucleoside-triphosphate reductase 820231 10815074 Flexsi_0777 Flexistipes sinusarabici DSM 4947 anaerobic ribonucleoside-triphosphate reductase YP_004603015.1 818183 R 717231 CDS YP_004603016.1 336323049 10815075 complement(821019..821774) 1 NC_015672.1 PFAM: HTH domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: BirA biotin operon repressor domain; birA, biotin-[acetyl-CoA-carboxylase] ligase region; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 821774 10815075 Flexsi_0778 Flexistipes sinusarabici DSM 4947 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor YP_004603016.1 821019 R 717231 CDS YP_004603017.1 336323050 10815076 821965..823284 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0161 Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; InterPro IPR005814:IPR005815; KEGG: amc:MADE_02212 adenosylmethionine--8-amino-7-oxononanoate transaminase; PFAM: Aminotransferase class-III; PRIAM: Adenosylmethionine--8-amino-7-oxononanoate transaminase; SPTR: Adenosylmethionine--8-amino-7-oxononanoate transaminase; TIGRFAM: Adenosylmethionine--8-amino-7-oxononanoate aminotransferase; transposase IS4 family protein 823284 10815076 Flexsi_0779 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603017.1 821965 D 717231 CDS YP_004603018.1 336323051 10815077 823360..824652 1 NC_015672.1 PFAM: Aminotransferase class-III; TIGRFAM: adenosylmethionine-8-amino-7-oxononanoate transaminase; COGs: COG0132 Dethiobiotin synthetase; HAMAP: Dethiobiotin synthase; InterPro IPR004472; KEGG: pmm:PMM1471 putative dethiobiotin synthase; PRIAM: Dethiobiotin synthase; SPTR: Dethiobiotin synthetase; TIGRFAM: Dethiobiotin synthase; adenosylmethionine-8-amino-7-oxononanoate aminotransferase 824652 10815077 Flexsi_0780 Flexistipes sinusarabici DSM 4947 adenosylmethionine-8-amino-7-oxononanoate aminotransferase YP_004603018.1 823360 D 717231 CDS YP_004603019.1 336323052 10815078 824628..825266 1 NC_015672.1 TIGRFAM: dethiobiotin synthase; COGs: COG0502 Biotin synthase; HAMAP: Biotin synthase; InterPro IPR007197:IPR010722:IPR006638:IPR002684; KEGG: dol:Dole_0682 biotin synthase; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; PRIAM: Biotin synthase; SMART: Elongator protein 3/MiaB/NifB; SPTR: Biotin synthase; TIGRFAM: Biotin synthase; dethiobiotin synthetase 825266 10815078 Flexsi_0781 Flexistipes sinusarabici DSM 4947 dethiobiotin synthetase YP_004603019.1 824628 D 717231 CDS YP_004603020.1 336323053 10815079 825253..826212 1 NC_015672.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: biotin synthetase; COGs: COG0156 7-keto-8-aminopelargonate synthetase; InterPro IPR004839; KEGG: ddf:DEFDS_1301 8-amino-7-oxononanoate synthase; PFAM: Aminotransferase, class I/II; PRIAM: 8-amino-7-oxononanoate synthase; SPTR: 8-amino-7-oxononanoate synthase; biotin synthase 826212 10815079 Flexsi_0782 Flexistipes sinusarabici DSM 4947 biotin synthase YP_004603020.1 825253 D 717231 CDS YP_004603021.1 336323054 10815080 826209..827360 1 NC_015672.1 PFAM: Aminotransferase class I and II; TIGRFAM: 8-amino-7-oxononanoate synthase; KEGG: dsa:Desal_1448 hypothetical protein; SPTR: Putative uncharacterized protein; 8-amino-7-oxononanoate synthase 827360 10815080 Flexsi_0783 Flexistipes sinusarabici DSM 4947 8-amino-7-oxononanoate synthase YP_004603021.1 826209 D 717231 CDS YP_004603022.1 336323055 10815081 827339..827941 1 NC_015672.1 InterPro IPR013216; KEGG: ddf:DEFDS_1303 biotin biosynthesis protein BioC; PFAM: Methyltransferase type 11; SPTR: Biotin biosynthesis protein BioC; hypothetical protein 827941 10815081 Flexsi_0784 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603022.1 827339 D 717231 CDS YP_004603023.1 336323056 10815082 827938..828687 1 NC_015672.1 PFAM: Methyltransferase domain; TIGRFAM: biotin biosynthesis protein BioC; COGs: COG1576 conserved hypothetical protein; HAMAP: Ribosomal RNA large subunit methyltransferase H; InterPro IPR003742; KEGG: cni:Calni_2051 hypothetical protein; PFAM: SPOUT methyltransferase, predicted; SPTR: Ribosomal RNA large subunit methyltransferase H; type 11 methyltransferase 828687 10815082 Flexsi_0785 Flexistipes sinusarabici DSM 4947 type 11 methyltransferase YP_004603023.1 827938 D 717231 CDS YP_004603024.1 336323057 10815083 829203..829667 1 NC_015672.1 PFAM: Predicted SPOUT methyltransferase; TIGRFAM: rRNA large subunit m3Psi methyltransferase RlmH; COGs: COG1734 DnaK suppressor protein; InterPro IPR000962; KEGG: dap:Dacet_2921 transcriptional regulator, TraR/DksA family; SPTR: Transcriptional regulator, TraR/DksA family; ribosomal RNA large subunit methyltransferase H 829667 10815083 Flexsi_0786 Flexistipes sinusarabici DSM 4947 ribosomal RNA large subunit methyltransferase H YP_004603024.1 829203 D 717231 CDS YP_004603025.1 336323058 10815084 829678..830040 1 NC_015672.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; TIGRFAM: RNA polymerase-binding protein DksA; COGs: COG0696 Phosphoglyceromutase; HAMAP: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; InterPro IPR011258:IPR006124:IPR005995; KEGG: ddf:DEFDS_1896 phosphoglycerate mutase; PFAM: BPG-independent PGAM, N-terminal; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; TraR/DksA family transcriptional regulator 830040 10815084 Flexsi_0787 Flexistipes sinusarabici DSM 4947 TraR/DksA family transcriptional regulator YP_004603025.1 829678 D 717231 CDS YP_004603026.1 336323059 10815085 830078..831607 1 NC_015672.1 PFAM: Metalloenzyme superfamily; BPG-independent PGAM N-terminus (iPGM_N); TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; COGs: COG1040 amidophosphoribosyltransferase; InterPro IPR000836; KEGG: cni:Calni_1596 phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Phosphoribosyltransferase; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase 831607 10815085 Flexsi_0788 Flexistipes sinusarabici DSM 4947 2,3-bisphosphoglycerate-independent phosphoglycerate mutase YP_004603026.1 830078 D 717231 CDS YP_004603027.1 336323060 10815086 831585..832265 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: comF family protein; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR020828:IPR020829:IPR006424; KEGG: ddf:DEFDS_1893 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; phosphoribosyltransferase 832265 10815086 Flexsi_0789 Flexistipes sinusarabici DSM 4947 phosphoribosyltransferase YP_004603027.1 831585 D 717231 CDS YP_004603028.1 336323061 10815087 832347..833345 1 NC_015672.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0126 3-phosphoglycerate kinase; HAMAP: Phosphoglycerate kinase; InterPro IPR001576; KEGG: cni:Calni_1593 phosphoglycerate kinase; PFAM: Phosphoglycerate kinase; PRIAM: Phosphoglycerate kinase; SPTR: Phosphoglycerate kinase; glyceraldehyde-3-phosphate dehydrogenase, type I 833345 10815087 Flexsi_0790 Flexistipes sinusarabici DSM 4947 glyceraldehyde-3-phosphate dehydrogenase, type I YP_004603028.1 832347 D 717231 CDS YP_004603029.1 336323062 10815088 833560..834738 1 NC_015672.1 PFAM: Phosphoglycerate kinase; COGs: COG0060 Isoleucyl-tRNA synthetase; HAMAP: Isoleucyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR010663:IPR002301; KEGG: cni:Calni_1082 isoleucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; DNA glycosylase/AP lyase/isoleucyl tRNA synthetase, zinc finger domain; PRIAM: Isoleucine--tRNA ligase; SPTR: Isoleucyl-tRNA synthetase; TIGRFAM: Isoleucyl-tRNA synthetase, class Ia; phosphoglycerate kinase 834738 10815088 Flexsi_0791 Flexistipes sinusarabici DSM 4947 phosphoglycerate kinase YP_004603029.1 833560 D 717231 CDS YP_004603030.1 336323063 10815089 835024..837825 1 NC_015672.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Zinc finger found in FPG and IleRS; TIGRFAM: isoleucyl-tRNA synthetase; COGs: COG0597 Lipoprotein signal peptidase; HAMAP: Peptidase A8, signal peptidase II; InterPro IPR001872; KEGG: ddf:DEFDS_1186 lipoprotein signal peptidase II; PFAM: Peptidase A8, signal peptidase II; SPTR: Lipoprotein signal peptidase; TIGRFAM: Peptidase A8, signal peptidase II; isoleucyl-tRNA synthetase 837825 10815089 Flexsi_0792 Flexistipes sinusarabici DSM 4947 isoleucyl-tRNA synthetase YP_004603030.1 835024 D 717231 CDS YP_004603031.1 336323064 10815090 837870..838346 1 NC_015672.1 PFAM: Signal peptidase (SPase) II; TIGRFAM: lipoprotein signal peptidase; COGs: COG0138 AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful); HAMAP: Bifunctional purine biosynthesis protein purH; InterPro IPR011607:IPR013982:IPR002695; KEGG: ddf:DEFDS_1187 bifunctional purine biosynthesis protein PurH; PFAM: AICARFT/IMPCHase bienzyme, formylation region; MGS-like; PRIAM: Phosphoribosylaminoimidazolecarboxamide formyltransferase; SMART: AICARFT/IMPCHase bienzyme, formylation region; SPTR: Bifunctional purine biosynthesis protein purH; TIGRFAM: AICARFT/IMPCHase bienzyme; lipoprotein signal peptidase 838346 10815090 Flexsi_0793 Flexistipes sinusarabici DSM 4947 lipoprotein signal peptidase YP_004603031.1 837870 D 717231 CDS YP_004603032.1 336323065 10815091 838336..839886 1 NC_015672.1 PFAM: AICARFT/IMPCHase bienzyme; MGS-like domain; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; COGs: COG0151 Phosphoribosylamine-glycine ligase; HAMAP: Phosphoribosylglycinamide synthetase; InterPro IPR020562:IPR020561:IPR020560:IPR000115; KEGG: ddf:DEFDS_1188 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain; PRIAM: Phosphoribosylamine--glycine ligase; SPTR: Phosphoribosylamine--glycine ligase; TIGRFAM: Phosphoribosylglycinamide synthetase; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase 839886 10815091 Flexsi_0794 Flexistipes sinusarabici DSM 4947 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase YP_004603032.1 838336 D 717231 CDS YP_004603033.1 336323066 10815092 840063..841346 1 NC_015672.1 PFAM: Phosphoribosylglycinamide synthetase, N domain; Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, C domain; TIGRFAM: phosphoribosylamine--glycine ligase; COGs: COG0041 Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase; InterPro IPR000031; KEGG: dap:Dacet_1774 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; SPTR: Phosphoribosylaminoimidazole carboxylase, catalytic subunit; TIGRFAM: 1-(5-Phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; phosphoribosylamine--glycine ligase 841346 10815092 Flexsi_0795 Flexistipes sinusarabici DSM 4947 phosphoribosylamine--glycine ligase YP_004603033.1 840063 D 717231 CDS YP_004603034.1 336323067 10815093 841343..841849 1 NC_015672.1 PFAM: AIR carboxylase; TIGRFAM: phosphoribosylaminoimidazole carboxylase, PurE protein; COGs: COG0009 Putative translation factor (SUA5); InterPro IPR006070:IPR004388; KEGG: dap:Dacet_1775 SUA5/YciO/YrdC domain protein; PFAM: Sua5/YciO/YrdC, N-terminal; SPTR: SUA5/yciO/yrdC domain protein; TIGRFAM: Sua5/YciO/YrdC/YwlC; phosphoribosylaminoimidazole carboxylase catalytic subunit 841849 10815093 Flexsi_0796 Flexistipes sinusarabici DSM 4947 phosphoribosylaminoimidazole carboxylase catalytic subunit YP_004603034.1 841343 D 717231 CDS YP_004603035.1 336323068 10815094 841853..842461 1 NC_015672.1 PFAM: yrdC domain; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; KEGG: caa:Caka_2024 hypothetical protein; SPTR: Putative uncharacterized protein; Sua5/YciO/YrdC/YwlC family protein 842461 10815094 Flexsi_0797 Flexistipes sinusarabici DSM 4947 Sua5/YciO/YrdC/YwlC family protein YP_004603035.1 841853 D 717231 CDS YP_004603036.1 336323069 10815095 842468..842887 1 NC_015672.1 KEGG: ddf:DEFDS_0308 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 842887 10815095 Flexsi_0798 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603036.1 842468 D 717231 CDS YP_004603037.1 336323070 10815096 complement(842912..843349) 1 NC_015672.1 COGs: COG0624 Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylase; InterPro IPR002933:IPR011650; KEGG: ddf:DEFDS_0765 acetylornithine deacetylase; PFAM: Peptidase M20; Peptidase M20, dimerisation; SPTR: Acetylornithine deacetylase; hypothetical protein 843349 10815096 Flexsi_0799 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603037.1 842912 R 717231 CDS YP_004603038.1 336323071 10815097 complement(843673..844749) 1 NC_015672.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: N-acetyl-ornithine/N-acetyl-lysine deacetylase; COGs: COG0456 Acetyltransferase; InterPro IPR000182; KEGG: ddf:DEFDS_0766 acetyltransferase GNAT family; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase, GNAT family; peptidase M20 844749 10815097 Flexsi_0800 Flexistipes sinusarabici DSM 4947 peptidase M20 YP_004603038.1 843673 R 717231 CDS YP_004603039.1 336323072 10815098 complement(844736..845227) 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; N-acetyltransferase GCN5 845227 10815098 Flexsi_0801 Flexistipes sinusarabici DSM 4947 N-acetyltransferase GCN5 YP_004603039.1 844736 R 717231 CDS YP_004603040.1 336323073 10815100 complement(845901..846614) 1 NC_015672.1 PFAM: Sel1 repeat; KEGG: nhl:Nhal_1311 hypothetical protein; SPTR: Putative uncharacterized protein; Sel1 domain-containing protein repeat-containing protein 846614 10815100 Flexsi_0802 Flexistipes sinusarabici DSM 4947 Sel1 domain-containing protein repeat-containing protein YP_004603040.1 845901 R 717231 CDS YP_004603041.1 336323074 10815101 846793..847635 1 NC_015672.1 COGs: COG1088 dTDP-D-glucose 4 6-dehydratase; InterPro IPR001509:IPR005888; KEGG: dap:Dacet_2762 dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: dTDP-glucose 4,6-dehydratase; SPTR: dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; hypothetical protein 847635 10815101 Flexsi_0803 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603041.1 846793 D 717231 CDS YP_004603042.1 336323075 10815102 complement(847659..848813) 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: dTDP-glucose 4,6-dehydratase; COGs: COG1091 dTDP-4-dehydrorhamnose reductase; InterPro IPR005913; KEGG: str:Sterm_2402 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase; PRIAM: dTDP-4-dehydrorhamnose reductase; SPTR: dTDP-4-dehydrorhamnose reductase; TIGRFAM: dTDP-4-dehydrorhamnose reductase; dTDP-glucose 4,6-dehydratase 848813 10815102 Flexsi_0804 Flexistipes sinusarabici DSM 4947 dTDP-glucose 4,6-dehydratase YP_004603042.1 847659 R 717231 CDS YP_004603043.1 336323076 10815103 complement(848825..849667) 1 NC_015672.1 PFAM: RmlD substrate binding domain; TIGRFAM: dTDP-4-dehydrorhamnose reductase; manually curated; dTDP-4-dehydrorhamnose reductase 849667 10815103 Flexsi_0805 Flexistipes sinusarabici DSM 4947 dTDP-4-dehydrorhamnose reductase YP_004603043.1 848825 R 717231 CDS YP_004603044.1 336323077 10815106 852813..853931 1 NC_015672.1 PFAM: Receptor family ligand binding region; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dap:Dacet_0893 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; extracellular ligand-binding receptor 853931 10815106 Flexsi_0808 Flexistipes sinusarabici DSM 4947 extracellular ligand-binding receptor YP_004603044.1 852813 D 717231 CDS YP_004603045.1 336323078 10815107 854004..854906 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: dap:Dacet_0894 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; ABC transporter 854906 10815107 Flexsi_0809 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603045.1 854004 D 717231 CDS YP_004603046.1 336323079 10815108 854909..856144 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ssm:Spirs_0346 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 856144 10815108 Flexsi_0810 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603046.1 854909 D 717231 CDS YP_004603047.1 336323080 10815109 856128..856922 1 NC_015672.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dap:Dacet_0896 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; monosaccharide-transporting ATPase 856922 10815109 Flexsi_0811 Flexistipes sinusarabici DSM 4947 monosaccharide-transporting ATPase YP_004603047.1 856128 D 717231 CDS YP_004603048.1 336323081 10815110 856909..857619 1 NC_015672.1 PFAM: ABC transporter; manually curated; Fe(3+)-transporting ATPase 857619 10815110 Flexsi_0812 Flexistipes sinusarabici DSM 4947 Fe(3+)-transporting ATPase YP_004603048.1 856909 D 717231 CDS YP_004603049.1 336323082 10815112 858660..859709 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0618 Exopolyphosphatase-related protein; InterPro IPR001667:IPR003156; KEGG: ddf:DEFDS_0574 phosphoesterase; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Phosphoesterase; transposase IS4 family protein 859709 10815112 Flexsi_0814 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603049.1 858660 D 717231 CDS YP_004603050.1 336323083 10815113 complement(859991..860983) 1 NC_015672.1 PFAM: DHH family; DHHA1 domain; KEGG: dap:Dacet_1862 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; phosphoesterase RecJ domain-containing protein 860983 10815113 Flexsi_0815 Flexistipes sinusarabici DSM 4947 phosphoesterase RecJ domain-containing protein YP_004603050.1 859991 R 717231 CDS YP_004603051.1 336323084 10815114 complement(860987..862036) 1 NC_015672.1 COGs: COG1452 Organic solvent tolerance protein OstA; InterPro IPR005653:IPR007543; KEGG: cni:Calni_0052 OstA family protein; PFAM: OstA-like protein; Organic solvent tolerance protein; SPTR: OstA family protein; manually curated; hypothetical protein 862036 10815114 Flexsi_0816 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603051.1 860987 R 717231 CDS YP_004603052.1 336323085 10815115 complement(862144..864294) 1 NC_015672.1 PFAM: OstA-like protein; COGs: COG0285 Folylpolyglutamate synthase; InterPro IPR013221:IPR001645; KEGG: cni:Calni_0051 FolC bifunctional protein; PFAM: Mur ligase, central; SPTR: FolC bifunctional protein; TIGRFAM: Folylpolyglutamate synthetase; OstA family protein 864294 10815115 Flexsi_0817 Flexistipes sinusarabici DSM 4947 OstA family protein YP_004603052.1 862144 R 717231 CDS YP_004603053.1 336323086 10815116 complement(864291..865415) 1 NC_015672.1 PFAM: Mur ligase middle domain; TIGRFAM: folylpolyglutamate synthase/dihydrofolate synthase; COGs: COG0777 Acetyl-CoA carboxylase beta subunit; HAMAP: Acetyl-coenzyme A carboxylase carboxyl transferase subunit beta; InterPro IPR000022:IPR000438; KEGG: ddf:DEFDS_0579 acetyl-CoA carboxylase carboxyl transferase subunit beta; PFAM: Carboxyl transferase; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-CoA carboxylase, carboxyl transferase, beta subunit; TIGRFAM: Acetyl-CoA carboxylase carboxyl transferase, beta subunit; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 865415 10815116 Flexsi_0818 Flexistipes sinusarabici DSM 4947 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_004603053.1 864291 R 717231 CDS YP_004603054.1 336323087 10815117 complement(865416..866261) 1 NC_015672.1 PFAM: Carboxyl transferase domain; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; acetyl-coenzyme A carboxylase carboxyl transferase subunit beta 866261 10815117 Flexsi_0819 Flexistipes sinusarabici DSM 4947 acetyl-coenzyme A carboxylase carboxyl transferase subunit beta YP_004603054.1 865416 R 717231 CDS YP_004603055.1 336323088 10815118 866483..866773 1 NC_015672.1 This gene is disrupted by insertion of repetitive element; manually curated; hypothetical protein 866773 10815118 Flexsi_0820 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603055.1 866483 D 717231 CDS YP_004603056.1 336323089 10815120 complement(867811..869076) 1 NC_015672.1 KEGG: ddf:DEFDS_1470 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 869076 10815120 Flexsi_0822 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603056.1 867811 R 717231 CDS YP_004603057.1 336323090 10815121 870024..872093 1 NC_015672.1 PFAM: Bacterial virulence factor lipase N-terminal; InterPro IPR000182:IPR012772; KEGG: bha:BH0920 diaminobutyric acid acetyltransferase; PFAM: GCN5-related N-acetyltransferase; PRIAM: Diaminobutyrate acetyltransferase; SPTR: L-2,4-diaminobutyric acid acetyl transferase; TIGRFAM: L-2,4-diaminobutyric acid acetyltransferase; hypothetical protein 872093 10815121 Flexsi_0823 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603057.1 870024 D 717231 CDS YP_004603058.1 336323091 10815122 872553..873056 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: diaminobutyrate acetyltransferase; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR005814:IPR004637:IPR012773; KEGG: diaminobutyrate/2-oxoglutarate aminotransferase; PFAM: Aminotransferase class-III; PRIAM: Diaminobutyrate--2-oxoglutarate transaminase; SPTR: Diaminobutyrate/2-oxoglutarate aminotransferase; TIGRFAM: Diaminobutyrate--2-oxoglutarate aminotransferase; Diaminobutyrate-2-oxoglutarate transaminase; L-2,4-diaminobutyric acid acetyltransferase 873056 10815122 Flexsi_0824 Flexistipes sinusarabici DSM 4947 L-2,4-diaminobutyric acid acetyltransferase YP_004603058.1 872553 D 717231 CDS YP_004603059.1 336323092 10815123 873143..874417 1 NC_015672.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; HAMAP: L-ectoine synthase; InterPro IPR010462; KEGG: dal:Dalk_1172 L-ectoine synthase; PFAM: Ectoine synthase; PRIAM: Ectoine synthase; SPTR: L-ectoine synthase; diaminobutyrate/2-oxoglutarate aminotransferase 874417 10815123 Flexsi_0825 Flexistipes sinusarabici DSM 4947 diaminobutyrate/2-oxoglutarate aminotransferase YP_004603059.1 873143 D 717231 CDS YP_004603060.1 336323093 10815124 874417..874809 1 NC_015672.1 PFAM: Ectoine synthase; COGs: COG2524 transcriptional regulator protein; InterPro IPR000644; KEGG: ddf:DEFDS_0494 acetoin utilization protein AcuB; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: Acetoin utilization protein AcuB; L-ectoine synthase 874809 10815124 Flexsi_0826 Flexistipes sinusarabici DSM 4947 L-ectoine synthase YP_004603060.1 874417 D 717231 CDS YP_004603061.1 336323094 10815125 complement(874982..875602) 1 NC_015672.1 PFAM: CBS domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase IS116/IS110/IS902 family protein; putative signal transduction protein with CBS domains 875602 10815125 Flexsi_0827 Flexistipes sinusarabici DSM 4947 putative signal transduction protein with CBS domains YP_004603061.1 874982 R 717231 CDS YP_004603062.1 336323095 10815126 876148..877161 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG4974 Site-specific recombinase XerD; InterPro IPR004107; KEGG: dap:Dacet_1530 integrase family protein; PFAM: Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 2; transposase IS116/IS110/IS902 family protein 877161 10815126 Flexsi_0828 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004603062.1 876148 D 717231 CDS YP_004603063.1 336323096 10815127 877513..878043 1 NC_015672.1 PFAM: Phage integrase, N-terminal SAM-like domain; KEGG: fpl:Ferp_2539 hypothetical protein; SPTR: Putative uncharacterized protein; integrase domain-containing protein SAM domain-containing protein 878043 10815127 Flexsi_0829 Flexistipes sinusarabici DSM 4947 integrase domain-containing protein SAM domain-containing protein YP_004603063.1 877513 D 717231 CDS YP_004603064.1 336323097 10815128 complement(877997..878368) 1 NC_015672.1 KEGG: mfs:MFS40622_1358 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 878368 10815128 Flexsi_0830 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603064.1 877997 R 717231 CDS YP_004603065.1 336323098 10815129 complement(878343..878609) 1 NC_015672.1 manually curated; hypothetical protein 878609 10815129 Flexsi_0831 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603065.1 878343 R 717231 CDS YP_004603066.1 336323099 10815131 880365..881051 1 NC_015672.1 PFAM: IstB-like ATP binding protein; manually curated; IstB domain-containing protein ATP-binding protein 881051 10815131 Flexsi_0833 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004603066.1 880365 D 717231 CDS YP_004603067.1 336323100 10815133 complement(882587..882955) 1 NC_015672.1 KEGG: sun:SUN_1976 transposase; SPTR: Transposase, IS4 family protein; hypothetical protein 882955 10815133 Flexsi_0835 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603067.1 882587 R 717231 CDS YP_004603068.1 336323101 10815134 complement(883173..883505) 1 NC_015672.1 KEGG: pop:POPTR_597343 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 883505 10815134 Flexsi_0836 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603068.1 883173 R 717231 CDS YP_004603069.1 336323102 10815135 complement(883776..884495) 1 NC_015672.1 hypothetical protein 884495 10815135 Flexsi_0837 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603069.1 883776 R 717231 CDS YP_004603070.1 336323103 10815136 884800..885129 1 NC_015672.1 COGs: COG3031 Type II secretory pathway component PulC; KEGG: dap:Dacet_0489 type II secretory pathway component PulC-like protein; SPTR: Type II secretory pathway component PulC-like protein; hypothetical protein 885129 10815136 Flexsi_0838 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603070.1 884800 D 717231 CDS YP_004603071.1 336323104 10815137 885270..886145 1 NC_015672.1 TIGRFAM: general secretion pathway protein C; COGs: COG1450 Type II secretory pathway component PulD; InterPro IPR005644:IPR004846:IPR013356; KEGG: ddf:DEFDS_1308 general secretion pathway protein D; PFAM: Type II/III secretion system; NolW-like; SPTR: General secretion pathway protein D; TIGRFAM: Type II secretion system gspD; hypothetical protein 886145 10815137 Flexsi_0839 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603071.1 885270 D 717231 CDS YP_004603072.1 336323105 10815138 886620..888473 1 NC_015672.1 PFAM: Bacterial type II/III secretion system short domain; Bacterial type II and III secretion system protein; TIGRFAM: general secretion pathway protein D; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR001482:IPR003593; KEGG: ddf:DEFDS_1307 general secretion pathway protein E; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: General secretion pathway protein E; general secretion pathway protein D 888473 10815138 Flexsi_0840 Flexistipes sinusarabici DSM 4947 general secretion pathway protein D YP_004603072.1 886620 D 717231 CDS YP_004603073.1 336323106 10815139 888473..889927 1 NC_015672.1 PFAM: Type II/IV secretion system protein; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: dap:Dacet_0492 type II secretion system F domain protein; PFAM: Type II secretion system F domain; SPTR: Type II secretion system F domain protein; type II secretion system protein E 889927 10815139 Flexsi_0841 Flexistipes sinusarabici DSM 4947 type II secretion system protein E YP_004603073.1 888473 D 717231 CDS YP_004603074.1 336323107 10815140 889927..891123 1 NC_015672.1 PFAM: Bacterial type II secretion system protein F domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Transposase IS116/IS110/IS902 family protein; type II secretion system F domain-containing protein 891123 10815140 Flexsi_0842 Flexistipes sinusarabici DSM 4947 type II secretion system F domain-containing protein YP_004603074.1 889927 D 717231 CDS YP_004603075.1 336323108 10815141 complement(891315..892328) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: pmx:PERMA_1157 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; transposase IS116/IS110/IS902 family protein 892328 10815141 Flexsi_0843 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004603075.1 891315 R 717231 CDS YP_004603076.1 336323109 10815142 892699..893352 1 NC_015672.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; InterPro IPR003594; KEGG: cni:Calni_1201 hypothetical protein; PFAM: ATP-binding region, ATPase-like; SPTR: Putative uncharacterized protein; winged helix family two component transcriptional regulator 893352 10815142 Flexsi_0844 Flexistipes sinusarabici DSM 4947 winged helix family two component transcriptional regulator YP_004603076.1 892699 D 717231 CDS YP_004603077.1 336323110 10815143 893656..894900 1 NC_015672.1 ATP-binding protein 894900 10815143 Flexsi_0845 Flexistipes sinusarabici DSM 4947 ATP-binding protein YP_004603077.1 893656 D 717231 CDS YP_004603078.1 336323111 10815144 894969..895268 1 NC_015672.1 COGs: COG3419 Tfp pilus assembly protein tip-associated adhesin PilY1; KEGG: sul:SYO3AOP1_1017 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; SPTR: Tfp pilus assembly protein tip-associated adhesin PilY1-like protein; hypothetical protein 895268 10815144 Flexsi_0846 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603078.1 894969 D 717231 CDS YP_004603079.1 336323112 10815145 895270..899193 1 NC_015672.1 InterPro IPR012902; Tfp pilus assembly protein tip-associated adhesin PilY1-like protein 899193 10815145 Flexsi_0847 Flexistipes sinusarabici DSM 4947 Tfp pilus assembly protein tip-associated adhesin PilY1-like protein YP_004603079.1 895270 D 717231 CDS YP_004603080.1 336323113 10815146 899197..899670 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; hypothetical protein 899670 10815146 Flexsi_0848 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603080.1 899197 D 717231 CDS YP_004603081.1 336323114 10815147 899660..900046 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: tye:THEYE_A0596 prepilin-type N-terminal cleavage/methylation domain protein; SPTR: Prepilin-type N-terminal cleavage/methylation domain protein; hypothetical protein 900046 10815147 Flexsi_0849 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603081.1 899660 D 717231 CDS YP_004603082.1 336323115 10815148 900099..900923 1 NC_015672.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; KEGG: geo:Geob_3073 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 900923 10815148 Flexsi_0850 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603082.1 900099 D 717231 CDS YP_004603083.1 336323116 10815149 900878..901480 1 NC_015672.1 hypothetical protein 901480 10815149 Flexsi_0851 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603083.1 900878 D 717231 CDS YP_004603084.1 336323117 10815150 901736..901933 1 NC_015672.1 COGs: COG1484 DNA replication protein; InterPro IPR002611:IPR003593; KEGG: sfu:Sfum_2832 IstB ATP binding domain-containing protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; hypothetical protein 901933 10815150 Flexsi_0852 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603084.1 901736 D 717231 CDS YP_004603085.1 336323118 10815151 complement(901956..902768) 1 NC_015672.1 PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: mac:MA2579 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase, IS21; IstB domain-containing protein ATP-binding protein 902768 10815151 Flexsi_0853 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004603085.1 901956 R 717231 CDS YP_004603086.1 336323119 10815152 complement(902765..904009) 1 NC_015672.1 PFAM: Integrase core domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; integrase catalytic subunit 904009 10815152 Flexsi_0854 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004603086.1 902765 R 717231 CDS YP_004603087.1 336323120 10815153 904148..905017 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR001387; KEGG: glo:Glov_3687 transcriptional regulator, XRE family; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; transposase IS4 family protein 905017 10815153 Flexsi_0855 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603087.1 904148 D 717231 CDS YP_004603088.1 336323121 10815154 complement(905332..905577) 1 NC_015672.1 PFAM: Helix-turn-helix; COGs: COG3550 conserved hypothetical protein; InterPro IPR012894:IPR012893; KEGG: hya:HY04AAS1_1299 HipA domain protein; PFAM: HipA-like, C-terminal; HipA-like, N-terminal; SPTR: HipA domain protein; helix-turn-helix domain-containing protein 905577 10815154 Flexsi_0856 Flexistipes sinusarabici DSM 4947 helix-turn-helix domain-containing protein YP_004603088.1 905332 R 717231 CDS YP_004603089.1 336323122 10815155 complement(905555..906775) 1 NC_015672.1 PFAM: HipA-like N-terminal domain; HipA-like C-terminal domain; TIGRFAM: HipA N-terminal domain; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: dap:Dacet_1179 transcriptional regulator, MarR family; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family; HipA domain-containing protein 906775 10815155 Flexsi_0857 Flexistipes sinusarabici DSM 4947 HipA domain-containing protein YP_004603089.1 905555 R 717231 CDS YP_004603090.1 336323123 10815156 complement(906969..907427) 1 NC_015672.1 PFAM: MarR family; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: ddf:DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+); PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP+); MarR family transcriptional regulator 907427 10815156 Flexsi_0858 Flexistipes sinusarabici DSM 4947 MarR family transcriptional regulator YP_004603090.1 906969 R 717231 CDS YP_004603091.1 336323124 10815157 complement(907688..909988) 1 NC_015672.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: cni:Calni_0968 integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 1; malate dehydrogenase 909988 10815157 Flexsi_0859 Flexistipes sinusarabici DSM 4947 malate dehydrogenase YP_004603091.1 907688 R 717231 CDS YP_004603092.1 336323125 10815158 910870..911766 1 NC_015672.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR001667:IPR000644:IPR002646; KEGG: cni:Calni_0967 polynucleotide adenylyltransferase region; PFAM: Polynucleotide adenylyltransferase region; Cystathionine beta-synthase, core; Phosphoesterase, RecJ-like; SMART: Cystathionine beta-synthase, core; SPTR: Polynucleotide adenylyltransferase region; Tyrosine recombinase xerC 911766 10815158 Flexsi_0860 Flexistipes sinusarabici DSM 4947 Tyrosine recombinase xerC YP_004603092.1 910870 D 717231 CDS YP_004603093.1 336323126 10815159 911766..914411 1 NC_015672.1 PFAM: DHH family; CBS domain; Poly A polymerase head domain; COGs: COG1702 Phosphate starvation-inducible protein PhoH predicted ATPase; InterPro IPR018111:IPR003714; KEGG: ddf:DEFDS_1078 phosphate starvation-induced protein PhoH; PFAM: PhoH-like protein; K Homology, type 1, subgroup; SPTR: Phosphate starvation-induced protein PhoH; polynucleotide adenylyltransferase 914411 10815159 Flexsi_0861 Flexistipes sinusarabici DSM 4947 polynucleotide adenylyltransferase YP_004603093.1 911766 D 717231 CDS YP_004603094.1 336323127 10815160 914404..915381 1 NC_015672.1 PFAM: KH domain; PhoH-like protein; COGs: COG0319 metal-dependent hydrolase; HAMAP: Uncharacterised protein family UPF0054; InterPro IPR002036; KEGG: ddf:DEFDS_1079 hypothetical protein; PFAM: Uncharacterised protein family UPF0054; SPTR: Probable rRNA maturation factor; TIGRFAM: Uncharacterised protein family UPF0054; PhoH family protein 915381 10815160 Flexsi_0862 Flexistipes sinusarabici DSM 4947 PhoH family protein YP_004603094.1 914404 D 717231 CDS YP_004603095.1 336323128 10815161 915371..915829 1 NC_015672.1 PFAM: Uncharacterized protein family UPF0054; TIGRFAM: metalloprotein, YbeY/UPF0054 family; COGs: COG0818 Diacylglycerol kinase; InterPro IPR000829:IPR000326; KEGG: cni:Calni_0964 diacylglycerol kinase; PFAM: Diacylglycerol kinase, prokaryotic; Phosphatidic acid phosphatase type 2/haloperoxidase; SPTR: Diacylglycerol kinase; metalloprotease ybeY 915829 10815161 Flexsi_0863 Flexistipes sinusarabici DSM 4947 metalloprotease ybeY YP_004603095.1 915371 D 717231 CDS YP_004603096.1 336323129 10815162 915956..916657 1 NC_015672.1 PFAM: Prokaryotic diacylglycerol kinase; PAP2 superfamily; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR002550:IPR000644:IPR005170; KEGG: ddf:DEFDS_1081 magnesium/cobalt efflux protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SMART: Cystathionine beta-synthase, core; SPTR: Magnesium/cobalt efflux protein; diacylglycerol kinase 916657 10815162 Flexsi_0864 Flexistipes sinusarabici DSM 4947 diacylglycerol kinase YP_004603096.1 915956 D 717231 CDS YP_004603097.1 336323130 10815163 916667..917962 1 NC_015672.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG1159 GTPase; HAMAP: GTP-binding protein Era; InterPro IPR002917:IPR004044:IPR005662:IPR005225; KEGG: ddf:DEFDS_1082 GTP-binding protein Era; PFAM: GTP-binding protein, HSR1-related; K Homology, type 2; SPTR: GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; Small GTP-binding protein; hypothetical protein 917962 10815163 Flexsi_0865 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603097.1 916667 D 717231 CDS YP_004603098.1 336323131 10815164 917946..918830 1 NC_015672.1 PFAM: GTPase of unknown function; KH domain; TIGRFAM: GTP-binding protein Era; small GTP-binding protein domain; KEGG: ddf:DEFDS_1084 hypothetical protein; SPTR: Putative uncharacterized protein; GTP-binding protein Era-like-protein 918830 10815164 Flexsi_0866 Flexistipes sinusarabici DSM 4947 GTP-binding protein Era-like-protein YP_004603098.1 917946 D 717231 CDS YP_004603099.1 336323132 10815165 918837..919535 1 NC_015672.1 PFAM: Recombination protein O N terminal; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ddf:DEFDS_1464 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 919535 10815165 Flexsi_0867 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603099.1 918837 D 717231 CDS YP_004603100.1 336323133 10815166 919545..920441 1 NC_015672.1 PFAM: Metallo-beta-lactamase superfamily; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 920441 10815166 Flexsi_0868 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603100.1 919545 D 717231 CDS YP_004603101.1 336323134 10815167 complement(920567..921934) 1 NC_015672.1 PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 921934 10815167 Flexsi_0869 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603101.1 920567 R 717231 CDS YP_004603102.1 336323135 10815170 924763..925245 1 NC_015672.1 PFAM: Putative ammonia monooxygenase; TIGRFAM: membrane protein AbrB duplication; COGs: COG1414 Transcriptional regulator; InterPro IPR005471:IPR014757; KEGG: gym:GYMC10_0864 transcriptional regulator, IclR family; PFAM: Transcriptional regulator IclR, N-terminal; Transcriptional regulator IclR, C-terminal; SMART: Transcriptional regulator IclR, N-terminal; SPTR: Transcriptional regulator, IclR family; membrane protein AbrB 925245 10815170 Flexsi_0872 Flexistipes sinusarabici DSM 4947 membrane protein AbrB YP_004603102.1 924763 D 717231 CDS YP_004603103.1 336323136 10815171 925258..925995 1 NC_015672.1 PFAM: IclR helix-turn-helix domain; Bacterial transcriptional regulator; COGs: COG3290 Signal transduction histidine kinase regulating citrate/malate metabolism; InterPro IPR013767:IPR003594:IPR000014; KEGG: bld:BLi01245 hypothetical protein; PFAM: ATP-binding region, ATPase-like; PAS fold; SMART: ATP-binding region, ATPase-like; PAS; SPTR: Putative uncharacterized protein; IclR family transcriptional regulator 925995 10815171 Flexsi_0873 Flexistipes sinusarabici DSM 4947 IclR family transcriptional regulator YP_004603103.1 925258 D 717231 CDS YP_004603104.1 336323137 10815172 926022..927605 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COGs: COG4565 Response regulator of citrate/malate metabolism; InterPro IPR001789; KEGG: dap:Dacet_1391 response regulator receiver and unknown domain protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; signal transduction histidine kinase regulating citrate/malate metabolism 927605 10815172 Flexsi_0874 Flexistipes sinusarabici DSM 4947 signal transduction histidine kinase regulating citrate/malate metabolism YP_004603104.1 926022 D 717231 CDS YP_004603105.1 336323138 10815173 927619..928302 1 NC_015672.1 PFAM: Response regulator receiver domain; Transcriptional regulator; COGs: COG3181 conserved hypothetical protein; InterPro IPR005064; KEGG: ppr:PBPRA2754 putative tricarboxylic transport TctC; SPTR: Putative tricarboxylic transport TctC; response regulator receiver and unknown domain-containing protein 928302 10815173 Flexsi_0875 Flexistipes sinusarabici DSM 4947 response regulator receiver and unknown domain-containing protein YP_004603105.1 927619 D 717231 CDS YP_004603106.1 336323139 10815174 928518..929504 1 NC_015672.1 PFAM: Tripartite tricarboxylate transporter family receptor; KEGG: tricarboxylate transport protein TctB; SPTR: Putative uncharacterized protein; putative tricarboxylic transport TctC 929504 10815174 Flexsi_0876 Flexistipes sinusarabici DSM 4947 putative tricarboxylic transport TctC YP_004603106.1 928518 D 717231 CDS YP_004603107.1 336323140 10815175 929580..930065 1 NC_015672.1 COGs: COG3333 conserved hypothetical protein; InterPro IPR002823; KEGG: abu:Abu_0100 putative tricarboxylic transport protein TctA; PFAM: Protein of unknown function DUF112, transmembrane; SPTR: Putative tricarboxylic transport TctA; tricarboxylate transport protein TctB 930065 10815175 Flexsi_0877 Flexistipes sinusarabici DSM 4947 tricarboxylate transport protein TctB YP_004603107.1 929580 D 717231 CDS YP_004603108.1 336323141 10815176 930062..931585 1 NC_015672.1 PFAM: Tripartite tricarboxylate transporter TctA family; COGs: COG0223 Methionyl-tRNA formyltransferase; InterPro IPR005793; KEGG: dap:Dacet_2496 formyl transferase domain protein; PFAM: Formyl transferase, C-terminal; SPTR: Formyl transferase domain protein; hypothetical protein 931585 10815176 Flexsi_0878 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603108.1 930062 D 717231 CDS YP_004603109.1 336323142 10815177 complement(931590..932462) 1 NC_015672.1 PFAM: Formyl transferase; Formyl transferase, C-terminal domain; COGs: COG4907 membrane protein; InterPro IPR018702; KEGG: ddf:DEFDS_1130 hypothetical protein; PFAM: Protein of unknown function DUF2207, membrane; SPTR: Putative uncharacterized protein; formyl transferase domain-containing protein 932462 10815177 Flexsi_0879 Flexistipes sinusarabici DSM 4947 formyl transferase domain-containing protein YP_004603109.1 931590 R 717231 CDS YP_004603110.1 336323143 10815178 complement(932456..934171) 1 NC_015672.1 PFAM: Predicted membrane protein (DUF2207); COGs: COG1704 conserved hypothetical protein; InterPro IPR007156; KEGG: ddf:DEFDS_1131 hypothetical protein; PFAM: LemA; SPTR: Putative uncharacterized protein; hypothetical protein 934171 10815178 Flexsi_0880 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603110.1 932456 R 717231 CDS YP_004603111.1 336323144 10815179 complement(934168..934728) 1 NC_015672.1 PFAM: LemA family; COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: ddf:DEFDS_1132 hypothetical protein; SPTR: Putative uncharacterized protein; LemA family protein 934728 10815179 Flexsi_0881 Flexistipes sinusarabici DSM 4947 LemA family protein YP_004603111.1 934168 R 717231 CDS YP_004603112.1 336323145 10815180 934786..935532 1 NC_015672.1 PFAM: Metallo-beta-lactamase superfamily; COGs: COG0674 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase alpha subunit; InterPro IPR019752:IPR002880; KEGG: tba:TERMP_00347 2-oxoglutarate oxidoreductase subunit alpha; PFAM: Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; Pyruvate/ketoisovalerate oxidoreductase; PRIAM: 2-oxoglutarate synthase; SPTR: 2-oxoacid:ferredoxin oxidoreductase, subunit alpha; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; hypothetical protein 935532 10815180 Flexsi_0882 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603112.1 934786 D 717231 CDS YP_004603113.1 336323146 10815181 935545..937239 1 NC_015672.1 PFAM: domain; Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, alpha subunit; COGs: COG1013 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase beta subunit; InterPro IPR011766:IPR011896; KEGG: pfu:PF0753 2-oxoacid ferredoxin oxidoreductase subunit beta; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; PRIAM: 2-oxoglutarate synthase; SPTR: 2-keto acid:ferredoxin oxidoreductase subunit beta; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate; 2-oxoacid:acceptor oxidoreductase subunit alpha 937239 10815181 Flexsi_0883 Flexistipes sinusarabici DSM 4947 2-oxoacid:acceptor oxidoreductase subunit alpha YP_004603113.1 935545 D 717231 CDS YP_004603114.1 336323147 10815182 937239..938114 1 NC_015672.1 PFAM: Pyruvate ferredoxin oxidoreductase beta subunit C terminal; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family; COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: dap:Dacet_1247 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Acetate--CoA ligase; SPTR: AMP-dependent synthetase and ligase; pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta 938114 10815182 Flexsi_0884 Flexistipes sinusarabici DSM 4947 pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta YP_004603114.1 937239 D 717231 CDS YP_004603115.1 336323148 10815183 938629..940509 1 NC_015672.1 PFAM: Domain of unknown function (DUF3448); AMP-binding enzyme; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644; KEGG: cni:Calni_0864 cbs domain containing membrane protein; PFAM: Cystathionine beta-synthase, core; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing membrane protein; acetate--CoA ligase 940509 10815183 Flexsi_0885 Flexistipes sinusarabici DSM 4947 acetate--CoA ligase YP_004603115.1 938629 D 717231 CDS YP_004603116.1 336323149 10815184 940780..941202 1 NC_015672.1 PFAM: CBS domain; COGs: COG2043 conserved hypothetical protein; InterPro IPR003748; KEGG: ddf:DEFDS_0852 hypothetical protein; PFAM: Protein of unknown function DUF169; SPTR: Putative uncharacterized protein; hypothetical protein 941202 10815184 Flexsi_0886 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603116.1 940780 D 717231 CDS YP_004603117.1 336323150 10815185 941204..941953 1 NC_015672.1 PFAM: Uncharacterised ArCR, COG2043; COGs: COG1190 Lysyl-tRNA synthetase (class II); HAMAP: Lysyl-tRNA synthetase; InterPro IPR004365:IPR004364:IPR002313; KEGG: ddf:DEFDS_1155 lysyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: Lysine--tRNA ligase; SPTR: Lysyl-tRNA synthetase; TIGRFAM: Lysyl-tRNA synthetase, class II; hypothetical protein 941953 10815185 Flexsi_0887 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603117.1 941204 D 717231 CDS YP_004603118.1 336323151 10815186 complement(942079..943551) 1 NC_015672.1 PFAM: tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial; COGs: COG0622 phosphoesterase; InterPro IPR004843:IPR000979; KEGG: cni:Calni_0361 phosphodiesterase, mj0936 family; PFAM: Metallophosphoesterase; SPTR: Phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; Lysyl-tRNA synthetase 943551 10815186 Flexsi_0888 Flexistipes sinusarabici DSM 4947 Lysyl-tRNA synthetase YP_004603118.1 942079 R 717231 CDS YP_004603119.1 336323152 10815187 943683..944156 1 NC_015672.1 TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG1077 Actin-like ATPase involved in cell morphogenesis; InterPro IPR004753; KEGG: cni:Calni_0362 rod shape-determining protein MreB; PFAM: Cell shape determining protein MreB/Mrl; SPTR: Rod shape-determining protein MreB; TIGRFAM: Cell shape determining protein MreB/Mrl; phosphodiesterase 944156 10815187 Flexsi_0889 Flexistipes sinusarabici DSM 4947 phosphodiesterase YP_004603119.1 943683 D 717231 CDS YP_004603120.1 336323153 10815188 944304..945329 1 NC_015672.1 PFAM: MreB/Mbl protein; TIGRFAM: cell shape determining protein, MreB/Mrl family; COGs: COG1792 Cell shape-determining protein; InterPro IPR007221:IPR005223; KEGG: ddf:DEFDS_1159 cell shape-determining protein MreC; PFAM: Rod shape-determining protein MreC; SPTR: Cell shape-determining protein MreC; TIGRFAM: Rod shape-determining protein MreC, subtype; MreB/Mrl family cell shape determining protein 945329 10815188 Flexsi_0890 Flexistipes sinusarabici DSM 4947 MreB/Mrl family cell shape determining protein YP_004603120.1 944304 D 717231 CDS YP_004603121.1 336323154 10815189 945329..946126 1 NC_015672.1 PFAM: rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; KEGG: dap:Dacet_1266 hypothetical protein; SPTR: Putative uncharacterized protein; rod shape-determining protein MreC 946126 10815189 Flexsi_0891 Flexistipes sinusarabici DSM 4947 rod shape-determining protein MreC YP_004603121.1 945329 D 717231 CDS YP_004603122.1 336323155 10815190 946116..946580 1 NC_015672.1 COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460:IPR017790; KEGG: ddf:DEFDS_1161 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; TIGRFAM: Penicillin-binding protein 2; hypothetical protein 946580 10815190 Flexsi_0892 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603122.1 946116 D 717231 CDS YP_004603123.1 336323156 10815191 946561..948375 1 NC_015672.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; TIGRFAM: penicillin-binding protein 2; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182:IPR011923; KEGG: dap:Dacet_1268 rod shape-determining protein RodA; PFAM: Cell cycle protein; SPTR: Rod shape-determining protein RodA; TIGRFAM: Rod shape-determining protein RodA; penicillin-binding protein 2 948375 10815191 Flexsi_0893 Flexistipes sinusarabici DSM 4947 penicillin-binding protein 2 YP_004603123.1 946561 D 717231 CDS YP_004603124.1 336323157 10815192 948362..949477 1 NC_015672.1 PFAM: Cell cycle protein; TIGRFAM: rod shape-determining protein RodA; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR018768:IPR006638; KEGG: ddf:DEFDS_1163 Fe-S oxidoreductases family protein; PFAM: Radical SAM; Protein of unknown function DUF2344; SMART: Elongator protein 3/MiaB/NifB; SPTR: Fe-S oxidoreductases family protein; rod shape-determining protein RodA 949477 10815192 Flexsi_0894 Flexistipes sinusarabici DSM 4947 rod shape-determining protein RodA YP_004603124.1 948362 D 717231 CDS YP_004603125.1 336323158 10815193 949494..951911 1 NC_015672.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2344); Radical SAM superfamily; TIGRFAM: radical SAM family uncharacterized protein; radical SAM-linked protein; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: ddf:DEFDS_1164 ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; radical SAM protein 951911 10815193 Flexsi_0895 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004603125.1 949494 D 717231 CDS YP_004603126.1 336323159 10815194 951904..952317 1 NC_015672.1 PFAM: Ferric uptake regulator family; InterPro IPR014127; KEGG: cni:Calni_0369 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP02757; Fur family ferric uptake regulator 952317 10815194 Flexsi_0896 Flexistipes sinusarabici DSM 4947 Fur family ferric uptake regulator YP_004603126.1 951904 D 717231 CDS YP_004603127.1 336323160 10815195 952283..953128 1 NC_015672.1 PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; COGs: COG3118 Thioredoxin domain-containing protein; InterPro IPR013766:IPR005746; KEGG: ddf:DEFDS_1167 thioredoxin; PFAM: Thioredoxin domain; SPTR: Thioredoxin; TIGRFAM: Thioredoxin; hypothetical protein 953128 10815195 Flexsi_0897 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603127.1 952283 D 717231 CDS YP_004603128.1 336323161 10815196 953179..953496 1 NC_015672.1 PFAM: Thioredoxin; TIGRFAM: thioredoxin; InterPro IPR013429; KEGG: ddf:DEFDS_1168 hypothetical protein; PFAM: Regulatory protein, FmdB, putative; SPTR: Putative uncharacterized protein; TIGRFAM: Regulatory protein, FmdB, putative; thioredoxin 953496 10815196 Flexsi_0898 Flexistipes sinusarabici DSM 4947 thioredoxin YP_004603128.1 953179 D 717231 CDS YP_004603129.1 336323162 10815197 953515..953706 1 NC_015672.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dap:Dacet_1449 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; FmdB family regulatory protein 953706 10815197 Flexsi_0899 Flexistipes sinusarabici DSM 4947 FmdB family regulatory protein YP_004603129.1 953515 D 717231 CDS YP_004603130.1 336323163 10815198 complement(953791..954072) 1 NC_015672.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, beta subunit; COGs: COG0728 membrane protein putative virulence factor; InterPro IPR004268; KEGG: cni:Calni_1205 integral membrane protein MviN; PFAM: Flagellin assembly, membrane protein MviN; SPTR: Integral membrane protein MviN; TIGRFAM: Flagellin assembly, membrane protein MviN; histone family protein DNA-binding protein 954072 10815198 Flexsi_0900 Flexistipes sinusarabici DSM 4947 histone family protein DNA-binding protein YP_004603130.1 953791 R 717231 CDS YP_004603131.1 336323164 10815199 954187..955665 1 NC_015672.1 PFAM: MviN-like protein; TIGRFAM: integral membrane protein MviN; COGs: COG1490 D-Tyr-tRNAtyr deacylase; HAMAP: D-tyrosyl-tRNA(Tyr) deacylase; InterPro IPR003732; KEGG: ddf:DEFDS_1421 D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase; SPTR: D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; integral membrane protein MviN 955665 10815199 Flexsi_0901 Flexistipes sinusarabici DSM 4947 integral membrane protein MviN YP_004603131.1 954187 D 717231 CDS YP_004603132.1 336323165 10815200 955662..956108 1 NC_015672.1 PFAM: D-Tyr-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; COGs: COG0491 Zn-dependent hydrolase including glyoxylase; KEGG: ddf:DEFDS_1420 metallo-beta-lactamase family protein; SPTR: Metallo-beta-lactamase family protein; D-tyrosyl-tRNA(Tyr) deacylase 956108 10815200 Flexsi_0902 Flexistipes sinusarabici DSM 4947 D-tyrosyl-tRNA(Tyr) deacylase YP_004603132.1 955662 D 717231 CDS YP_004603133.1 336323166 10815201 956130..956750 1 NC_015672.1 PFAM: Metallo-beta-lactamase superfamily; COGs: COG1047 FKBP-type peptidyl-prolyl cis-trans isomerase 2; InterPro IPR001179; KEGG: ddf:DEFDS_0971 FKBP-type peptidyl-prolyl cis-trans isomerase SlyD; PFAM: Peptidyl-prolyl cis-trans isomerase, FKBP-type; SPTR: Peptidyl-prolyl cis-trans isomerase; metallo-beta-lactamase family protein 956750 10815201 Flexsi_0903 Flexistipes sinusarabici DSM 4947 metallo-beta-lactamase family protein YP_004603133.1 956130 D 717231 CDS YP_004603134.1 336323167 10815202 complement(956781..957206) 1 NC_015672.1 PFAM: FKBP-type peptidyl-prolyl cis-trans isomerase; COGs: COG1515 Deoxyinosine 3'endonuclease (endonuclease V); HAMAP: Endonuclease V; InterPro IPR007581; KEGG: ddf:DEFDS_0855 deoxyribonuclease V; PFAM: Endonuclease V; PRIAM: Deoxyribonuclease V; SPTR: Endonuclease V; FKBP-type peptidylprolyl isomerase 957206 10815202 Flexsi_0904 Flexistipes sinusarabici DSM 4947 FKBP-type peptidylprolyl isomerase YP_004603134.1 956781 R 717231 CDS YP_004603135.1 336323168 10815203 complement(957604..958248) 1 NC_015672.1 PFAM: Endonuclease V; COGs: COG1752 esterase of the alpha-beta hydrolase superfamily; InterPro IPR002641; KEGG: ddf:DEFDS_1259 patatin-like phospholipase family protein; PFAM: Patatin; SPTR: Patatin-like phospholipase family protein; endonuclease V 958248 10815203 Flexsi_0905 Flexistipes sinusarabici DSM 4947 endonuclease V YP_004603135.1 957604 R 717231 CDS YP_004603136.1 336323169 10815204 958461..959354 1 NC_015672.1 PFAM: Patatin-like phospholipase; COGs: COG1268 conserved hypothetical protein; InterPro IPR003784; KEGG: ddf:DEFDS_1258 hypothetical protein; PFAM: BioY protein; SPTR: Putative uncharacterized protein; patatin 959354 10815204 Flexsi_0906 Flexistipes sinusarabici DSM 4947 patatin YP_004603136.1 958461 D 717231 CDS YP_004603137.1 336323170 10815205 959344..959883 1 NC_015672.1 PFAM: BioY family; COGs: COG0546 phosphatase; InterPro IPR005834; KEGG: ddf:DEFDS_1369 HAD-superfamily hydrolase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: HAD-superfamily hydrolase; BioY protein 959883 10815205 Flexsi_0907 Flexistipes sinusarabici DSM 4947 BioY protein YP_004603137.1 959344 D 717231 CDS YP_004603138.1 336323171 10815206 complement(960034..960651) 1 NC_015672.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ddf:DEFDS_0995 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; haloacid dehalogenase domain-containing protein hydrolase 960651 10815206 Flexsi_0908 Flexistipes sinusarabici DSM 4947 haloacid dehalogenase domain-containing protein hydrolase YP_004603138.1 960034 R 717231 CDS YP_004603139.1 336323172 10815207 961157..962731 1 NC_015672.1 PFAM: Radical SAM superfamily; COGs: COG1496 conserved hypothetical protein; InterPro IPR003730; KEGG: cni:Calni_1099 hypothetical protein; PFAM: Multi-copper polyphenol oxidoreductase, laccase; SPTR: Putative uncharacterized protein; radical SAM protein 962731 10815207 Flexsi_0909 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004603139.1 961157 D 717231 CDS YP_004603140.1 336323173 10815208 962707..963420 1 NC_015672.1 PFAM: Multi-copper polyphenol oxidoreductase laccase; TIGRFAM: uncharacterized protein, YfiH family; COGs: COG0325 enzyme with a TIM-barrel fold; InterPro IPR001608:IPR011078; KEGG: ddf:DEFDS_0997 hypothetical protein; PFAM: Alanine racemase, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzyme, YBL036C type; multi-copper polyphenol oxidoreductase, laccase 963420 10815208 Flexsi_0910 Flexistipes sinusarabici DSM 4947 multi-copper polyphenol oxidoreductase, laccase YP_004603140.1 962707 D 717231 CDS YP_004603141.1 336323174 10815209 963417..964121 1 NC_015672.1 PFAM: Alanine racemase, N-terminal domain; TIGRFAM: pyridoxal phosphate enzyme, YggS family; InterPro IPR003425; KEGG: ddf:DEFDS_0998 hypothetical protein; PFAM: Protein of unknown function YGGT; SPTR: Putative uncharacterized protein; hypothetical protein 964121 10815209 Flexsi_0911 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603141.1 963417 D 717231 CDS YP_004603142.1 336323175 10815210 964129..964947 1 NC_015672.1 PFAM: YGGT family; COGs: COG4956 Integral membrane protein (PIN domain superfamily); InterPro IPR002716:IPR002792:IPR006596; KEGG: ddf:DEFDS_1000 hypothetical protein; PFAM: PilT protein, N-terminal; Deoxyribonuclease/rho motif-related TRAM; SMART: Nucleotide binding protein, PINc; SPTR: Putative uncharacterized protein; hypothetical protein 964947 10815210 Flexsi_0912 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603142.1 964129 D 717231 CDS YP_004603143.1 336323176 10815211 965084..966049 1 NC_015672.1 PFAM: TRAM domain; PIN domain; COGs: COG1211 4-diphosphocytidyl-2-methyl-D-erithritol synthase; HAMAP: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; InterPro IPR001228; KEGG: ddf:DEFDS_1001 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PRIAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; SPTR: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase; PilT protein domain-containing protein 966049 10815211 Flexsi_0913 Flexistipes sinusarabici DSM 4947 PilT protein domain-containing protein YP_004603143.1 965084 D 717231 CDS YP_004603144.1 336323177 10815212 966054..966740 1 NC_015672.1 PFAM: Uncharacterized protein family UPF0007; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; manually curated; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 966740 10815212 Flexsi_0914 Flexistipes sinusarabici DSM 4947 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_004603144.1 966054 D 717231 CDS YP_004603145.1 336323178 10815214 complement(967399..968367) 1 NC_015672.1 PFAM: 2-nitropropane dioxygenase; KEGG: sun:SUN_1976 transposase; SPTR: Transposase, IS4 family protein; 2-nitropropane dioxygenase 968367 10815214 Flexsi_0916 Flexistipes sinusarabici DSM 4947 2-nitropropane dioxygenase YP_004603145.1 967399 R 717231 CDS YP_004603146.1 336323179 10815215 complement(968643..968975) 1 NC_015672.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 968975 10815215 Flexsi_0917 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603146.1 968643 R 717231 CDS YP_004603147.1 336323180 10815216 complement(969164..970999) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; transposase IS4 family protein 970999 10815216 Flexsi_0918 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603147.1 969164 R 717231 CDS YP_004603148.1 336323181 10815217 complement(971388..972401) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR008030; KEGG: dap:Dacet_2046 NmrA family protein; SPTR: NmrA family protein; transposase IS116/IS110/IS902 family protein 972401 10815217 Flexsi_0919 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004603148.1 971388 R 717231 CDS YP_004603149.1 336323182 10815218 972997..974427 1 NC_015672.1 PFAM: Protein of unknown function (DUF2867); NmrA-like family; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: has:Halsa_0198 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; NmrA family protein 974427 10815218 Flexsi_0920 Flexistipes sinusarabici DSM 4947 NmrA family protein YP_004603149.1 972997 D 717231 CDS YP_004603150.1 336323183 10815219 complement(974435..975367) 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG5012 cobalamin binding protein; InterPro IPR006158; KEGG: dal:Dalk_1842 cobalamin B12-binding; PFAM: Cobalamin (vitamin B12)-binding; SPTR: Cobalamin B12-binding; diguanylate cyclase 975367 10815219 Flexsi_0921 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004603150.1 974435 R 717231 CDS YP_004603151.1 336323184 10815220 complement(975364..976011) 1 NC_015672.1 PFAM: B12 binding domain; KEGG: dal:Dalk_1840 hypothetical protein; SPTR: Putative uncharacterized protein; cobalamin B12-binding domain-containing protein 976011 10815220 Flexsi_0922 Flexistipes sinusarabici DSM 4947 cobalamin B12-binding domain-containing protein YP_004603151.1 975364 R 717231 CDS YP_004603152.1 336323185 10815221 complement(976226..976669) 1 NC_015672.1 COGs: COG0003 ATPase involved in chromosome partitioning; InterPro IPR003348; KEGG: kcr:Kcr_0220 arsenite-transporting ATPase; PFAM: ATPase, anion-transporting; PRIAM: Arsenite-transporting ATPase; SPTR: Arsenite-transporting ATPase; hypothetical protein 976669 10815221 Flexsi_0923 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603152.1 976226 R 717231 CDS YP_004603153.1 336323186 10815222 complement(976765..977676) 1 NC_015672.1 PFAM: Anion-transporting ATPase; TIGRFAM: arsenite-activated ATPase ArsA; KEGG: cni:Calni_0016 hypothetical protein; SPTR: Putative uncharacterized protein; arsenite-transporting ATPase 977676 10815222 Flexsi_0924 Flexistipes sinusarabici DSM 4947 arsenite-transporting ATPase YP_004603153.1 976765 R 717231 CDS YP_004603154.1 336323187 10815223 977815..978126 1 NC_015672.1 COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569; KEGG: sfr:Sfri_1402 peptide methionine sulfoxide reductase; PFAM: Peptide methionine sulphoxide reductase MsrA; PRIAM: Peptide-methionine (S)-S-oxide reductase; SPTR: Peptide methionine sulfoxide reductase msrA 1; TIGRFAM: Peptide methionine sulphoxide reductase MsrA; hypothetical protein 978126 10815223 Flexsi_0925 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603154.1 977815 D 717231 CDS YP_004603155.1 336323188 10815224 978263..978853 1 NC_015672.1 PFAM: Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; peptide methionine sulfoxide reductase MsrA 978853 10815224 Flexsi_0926 Flexistipes sinusarabici DSM 4947 peptide methionine sulfoxide reductase MsrA YP_004603155.1 978263 D 717231 CDS YP_004603156.1 336323189 10815225 979190..980557 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: hor:Hore_20910 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter; transposase IS4 family protein 980557 10815225 Flexsi_0927 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603156.1 979190 D 717231 CDS YP_004603157.1 336323190 10815226 complement(980688..982007) 1 NC_015672.1 PFAM: Sodium:neurotransmitter symporter family; KEGG: cni:Calni_0609 hypothetical protein; SPTR: Putative uncharacterized protein; sodium:neurotransmitter symporter 982007 10815226 Flexsi_0928 Flexistipes sinusarabici DSM 4947 sodium:neurotransmitter symporter YP_004603157.1 980688 R 717231 CDS YP_004603158.1 336323191 10815227 complement(982431..983393) 1 NC_015672.1 PFAM: Uncharacterized protein conserved in bacteria C-term(DUF2220); COGs: COG3096 conserved hypothetical protein involved in chromosome partitioning; KEGG: cni:Calni_0610 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 983393 10815227 Flexsi_0929 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603158.1 982431 R 717231 CDS YP_004603159.1 336323192 10815228 complement(983386..986931) 1 NC_015672.1 PFAM: MukB N-terminal; KEGG: cni:Calni_0611 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 986931 10815228 Flexsi_0930 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603159.1 983386 R 717231 CDS YP_004603160.1 336323193 10815229 complement(986922..987611) 1 NC_015672.1 KEGG: cni:Calni_0612 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 987611 10815229 Flexsi_0931 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603160.1 986922 R 717231 CDS YP_004603161.1 336323194 10815230 complement(987589..988872) 1 NC_015672.1 manually curated; hypothetical protein 988872 10815230 Flexsi_0932 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603161.1 987589 R 717231 CDS YP_004603162.1 336323195 10815232 990459..992414 1 NC_015672.1 COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: dat:HRM2_39560 HTH-type transcriptional regulator (MArR family protein); PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: HTH-type transcriptional regulator (MArR family protein); hypothetical protein 992414 10815232 Flexsi_0934 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603162.1 990459 D 717231 CDS YP_004603163.1 336323196 10815233 993070..993504 1 NC_015672.1 PFAM: MarR family; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: gsu:GSU2588 alpha keto acid dehydrogenase complex, E3 component, lipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Dihydrolipoyl dehydrogenase; MarR family transcriptional regulator 993504 10815233 Flexsi_0935 Flexistipes sinusarabici DSM 4947 MarR family transcriptional regulator YP_004603163.1 993070 D 717231 CDS YP_004603164.1 336323197 10815234 993508..994872 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; TIGRFAM: dihydrolipoamide dehydrogenase; COGs: COG4108 Peptide chain release factor RF-3; InterPro IPR000795:IPR004161:IPR004548:IPR005225; KEGG: gvi:glr3159 peptide chain release factor 3; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Strongly similar to translation releasing factor RF-3; TIGRFAM: Peptide chain release factor 3; Small GTP-binding protein; dihydrolipoyl dehydrogenase 994872 10815234 Flexsi_0936 Flexistipes sinusarabici DSM 4947 dihydrolipoyl dehydrogenase YP_004603164.1 993508 D 717231 CDS YP_004603165.1 336323198 10815235 complement(994972..996579) 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; peptide chain release factor 3; KEGG: tau:Tola_1477 hypothetical protein; SPTR: Putative uncharacterized protein; peptide chain release factor 3 996579 10815235 Flexsi_0937 Flexistipes sinusarabici DSM 4947 peptide chain release factor 3 YP_004603165.1 994972 R 717231 CDS YP_004603166.1 336323199 10815236 complement(996728..997441) 1 NC_015672.1 COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR006059; KEGG: dsa:Desal_3552 extracellular solute-binding protein family 1; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Extracellular solute-binding protein family 1; hypothetical protein 997441 10815236 Flexsi_0938 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603166.1 996728 R 717231 CDS YP_004603167.1 336323200 10815237 997774..998775 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein; COGs: COG1178 ABC-type Fe3+ transport system permease component; InterPro IPR000515; KEGG: dsa:Desal_3553 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; family 1 extracellular solute-binding protein 998775 10815237 Flexsi_0939 Flexistipes sinusarabici DSM 4947 family 1 extracellular solute-binding protein YP_004603167.1 997774 D 717231 CDS YP_004603168.1 336323201 10815238 998815..1000383 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR013611:IPR003593; KEGG: dsa:Desal_3554 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 2; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; ABC transporter 1000383 10815238 Flexsi_0940 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603168.1 998815 D 717231 CDS YP_004603169.1 336323202 10815239 1000364..1001401 1 NC_015672.1 PFAM: ABC transporter; TOBE domain; manually curated; Fe(3+)-transporting ATPase 1001401 10815239 Flexsi_0941 Flexistipes sinusarabici DSM 4947 Fe(3+)-transporting ATPase YP_004603169.1 1000364 D 717231 CDS YP_004603170.1 336323203 10815241 complement(1001713..1002303) 1 NC_015672.1 PFAM: Aminotransferase class IV; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR015890; KEGG: ddf:DEFDS_1304 para-aminobenzoate synthase component I; PFAM: Chorismate binding, C-terminal; PRIAM: Anthranilate synthase; SPTR: Para-aminobenzoate synthase component I; 4-amino-4-deoxychorismate lyase 1002303 10815241 Flexsi_0943 Flexistipes sinusarabici DSM 4947 4-amino-4-deoxychorismate lyase YP_004603170.1 1001713 R 717231 CDS YP_004603171.1 336323204 10815242 complement(1002287..1003297) 1 NC_015672.1 PFAM: chorismate binding enzyme; COGs: COG0646 Methionine synthase I (cobalamin-dependent) methyltransferase domain; InterPro IPR003726; KEGG: oih:OB0691 betaine-homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; PRIAM: Betaine--homocysteine S-methyltransferase; SPTR: Betaine-homocysteine methyltransferase; anthranilate synthase 1003297 10815242 Flexsi_0944 Flexistipes sinusarabici DSM 4947 anthranilate synthase YP_004603171.1 1002287 R 717231 CDS YP_004603172.1 336323205 10815243 complement(1003414..1004460) 1 NC_015672.1 PFAM: Homocysteine S-methyltransferase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; betaine--homocysteine S-methyltransferase 1004460 10815243 Flexsi_0945 Flexistipes sinusarabici DSM 4947 betaine--homocysteine S-methyltransferase YP_004603172.1 1003414 R 717231 CDS YP_004603173.1 336323206 10815244 1004905..1006218 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR011579:IPR004256; KEGG: mtt:Ftrac_2201 duf234 dexx-box atpase; SPTR: DUF234 DEXX-box ATPase; transposase IS4 family protein 1006218 10815244 Flexsi_0946 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603173.1 1004905 D 717231 CDS YP_004603174.1 336323207 10815245 complement(1006635..1007945) 1 NC_015672.1 PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; InterPro IPR011462; KEGG: caa:Caka_2052 protein of unknown function DUF1568; SPTR: Putative uncharacterized protein; duf234 dexx-box atpase 1007945 10815245 Flexsi_0947 Flexistipes sinusarabici DSM 4947 duf234 dexx-box atpase YP_004603174.1 1006635 R 717231 CDS YP_004603175.1 336323208 10815246 complement(1008127..1009011) 1 NC_015672.1 PFAM: Transposase IS200 like; InterPro IPR004919:IPR018651; KEGG: hmo:HM1_2923 hypothetical protein; PFAM: Protein of unknown function DUF262; Protein of unknown function DUF2081; SPTR: Putative uncharacterized protein; hypothetical protein 1009011 10815246 Flexsi_0948 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603175.1 1008127 R 717231 CDS YP_004603176.1 336323209 10815247 complement(1009417..1011162) 1 NC_015672.1 PFAM: Uncharacterized conserved protein (DUF2081); Protein of unknown function DUF262; Protein of unknown function (DUF1524); COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: tpt:Tpet_1081 CRISPR-associated Cas2 family protein; SPTR: CRISPR-associated protein, Cas2 family; TIGRFAM: Protein of unknown function DUF196; hypothetical protein 1011162 10815247 Flexsi_0949 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603176.1 1009417 R 717231 CDS YP_004603177.1 336323210 10815248 complement(1014455..1014736) 1 NC_015672.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729:IPR019858; KEGG: brm:Bmur_1230 CRISPR-associated protein Cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1, HMARI/TNEAP subtype; CRISPR-associated protein Cas1; CRISPR-associated protein Cas2 1014736 10815248 Flexsi_0950 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas2 YP_004603177.1 1014455 R 717231 CDS YP_004603178.1 336323211 10815249 complement(1014740..1015729) 1 NC_015672.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1, subtype I-B/HMARI/TNEAP; CRISPR-associated endonuclease Cas1; COGs: COG1468 RecB family exonuclease; InterPro IPR013343; KEGG: cli:Clim_0447 CRISPR-associated protein Cas4; PFAM: CRISPR-associated protein Cas4; SPTR: CRISPR-associated protein Cas4; TIGRFAM: CRISPR-associated protein Cas4; CRISPR-associated protein Cas1 1015729 10815249 Flexsi_0951 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas1 YP_004603178.1 1014740 R 717231 CDS YP_004603179.1 336323212 10815250 complement(1015733..1016227) 1 NC_015672.1 PFAM: Domain of unknown function DUF83; TIGRFAM: CRISPR-associated protein Cas4; COGs: COG1203 helicase; InterPro IPR014001:IPR001650:IPR006483:IPR006474; KEGG: tye:THEYE_A2039 CRISPR-associated helicase Cas3; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: CRISPR-associated helicase Cas3; TIGRFAM: Helicase Cas3, CRISPR-associated, core; CRISPR-associated HD domain; CRISPR-associated protein Cas4 1016227 10815250 Flexsi_0952 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas4 YP_004603179.1 1015733 R 717231 CDS YP_004603180.1 336323213 10815251 complement(1016231..1018372) 1 NC_015672.1 PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD; InterPro IPR007552:IPR013422; KEGG: tye:THEYE_A2040 CRISPR-associated protein Cas5; SPTR: CRISPR-associated protein Cas5; TIGRFAM: CRISPR-associated protein Cas5; CRISPR-associated helicase Cas3 1018372 10815251 Flexsi_0953 Flexistipes sinusarabici DSM 4947 CRISPR-associated helicase Cas3 YP_004603180.1 1016231 R 717231 CDS YP_004603181.1 336323214 10815252 complement(1018375..1019094) 1 NC_015672.1 PFAM: CRISPR-associated protein (Cas_Cas5); TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; COGs: COG1857 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR010154:IPR013414; KEGG: tye:THEYE_A2041 CRISPR-associated regulatory protein, DevR family; SPTR: CRISPR-associated regulatory protein, DevR family; TIGRFAM: CRISPR-associated regulatory DevR; CRISPR-associated negative autoregulator; CRISPR-associated protein Cas5 1019094 10815252 Flexsi_0954 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas5 YP_004603181.1 1018375 R 717231 CDS YP_004603182.1 336323215 10815253 complement(1019091..1020026) 1 NC_015672.1 PFAM: CRISPR-associated negative autoregulator DevR/Csa2; TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP; InterPro IPR010180; KEGG: tye:THEYE_A2042 CRISPR-associated CXXC_CXXC protein Cst1; SPTR: CRISPR-associated CXXC_CXXC protein Cst1; TIGRFAM: CRISPR-associated protein, CXXC-CXXC; DevR family CRISPR-associated autoregulator 1020026 10815253 Flexsi_0955 Flexistipes sinusarabici DSM 4947 DevR family CRISPR-associated autoregulator YP_004603182.1 1019091 R 717231 CDS YP_004603183.1 336323216 10815254 complement(1020019..1021599) 1 NC_015672.1 PFAM: CRISPR-associated protein (Cas_CXXC_CXXC); TIGRFAM: CRISPR-associated protein Cas8a1/Cst1, subtype I-B/TNEAP; COGs: COG1583 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR002743:IPR010156; KEGG: str:Sterm_1593 CRISPR-associated protein Cas6; PFAM: Protein of unknown function DUF57; SPTR: CRISPR-associated protein Cas6; TIGRFAM: CRISPR-associated protein, Cas6; CRISPR-associated protein 1021599 10815254 Flexsi_0956 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein YP_004603183.1 1020019 R 717231 CDS YP_004603184.1 336323217 10815255 complement(1021596..1022333) 1 NC_015672.1 PFAM: CRISPR associated protein Cas6; TIGRFAM: CRISPR-associated endoribonuclease Cas6; COGs: COG0680 Ni Fe-hydrogenase maturation factor; InterPro IPR000671; KEGG: gur:Gura_1947 hydrogenase maturation protease; PFAM: Peptidase A31, hydrogen uptake protein; SPTR: Hydrogenase maturation protease; TIGRFAM: Peptidase A31, hydrogen uptake protein; CRISPR-associated protein Cas6 1022333 10815255 Flexsi_0957 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas6 YP_004603184.1 1021596 R 717231 CDS YP_004603185.1 336323218 10815256 complement(1022628..1023116) 1 NC_015672.1 PFAM: Hydrogenase maturation protease; TIGRFAM: hydrogenase expression/formation protein; hydrogenase maturation protease; COGs: COG0374 Ni Fe-hydrogenase I large subunit; InterPro IPR001501; KEGG: gur:Gura_1946 nickel-dependent hydrogenase, large subunit; PFAM: Nickel-dependent hydrogenase, large subunit; PRIAM: Cytochrome-c3 hydrogenase; SPTR: Nickel-dependent hydrogenase, large subunit; hydrogenase maturation protease 1023116 10815256 Flexsi_0958 Flexistipes sinusarabici DSM 4947 hydrogenase maturation protease YP_004603185.1 1022628 R 717231 CDS YP_004603186.1 336323219 10815257 complement(1023113..1024795) 1 NC_015672.1 PFAM: Nickel-dependent hydrogenase; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: glo:Glov_0146 putative hydrogenase 2 b cytochrome subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Polysulphide reductase NrfD; cytochrome-c3 hydrogenase 1024795 10815257 Flexsi_0959 Flexistipes sinusarabici DSM 4947 cytochrome-c3 hydrogenase YP_004603186.1 1023113 R 717231 CDS YP_004603187.1 336323220 10815258 complement(1024788..1025987) 1 NC_015672.1 PFAM: Polysulphide reductase, NrfD; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450:IPR006311; KEGG: gbm:Gbem_3138 hydrogenase 2 protein HybA; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Periplasmically oriented, membrane-bound [NiFe]-hydrogenase iron-sulfur cluster-binding subunit; polysulfide reductase NrfD 1025987 10815258 Flexsi_0960 Flexistipes sinusarabici DSM 4947 polysulfide reductase NrfD YP_004603187.1 1024788 R 717231 CDS YP_004603188.1 336323221 10815259 complement(1025974..1026867) 1 NC_015672.1 COGs: COG1740 Ni Fe-hydrogenase I small subunit; InterPro IPR006137:IPR001821:IPR006311; KEGG: dap:Dacet_1223 hydrogenase (NiFe) small subunit HydA; PFAM: NADH:ubiquinone oxidoreductase-like, 20kDa subunit; PRIAM: Hydrogenase (acceptor); SPTR: Hydrogenase (NiFe) small subunit HydA; TIGRFAM: [Ni-Fe]-hydrogenase, small subunit; Twin-arginine translocation pathway, signal sequence; 4Fe-4S ferredoxin 1026867 10815259 Flexsi_0961 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603188.1 1025974 R 717231 CDS YP_004603189.1 336323222 10815260 complement(1026854..1027945) 1 NC_015672.1 PFAM: NADH ubiquinone oxidoreductase, 20 Kd subunit; TIGRFAM: hydrogenase (NiFe) small subunit (hydA); KEGG: dap:Dacet_1058 hypothetical protein; SPTR: Putative uncharacterized protein; hydrogenase (NiFe) small subunit HydA 1027945 10815260 Flexsi_0962 Flexistipes sinusarabici DSM 4947 hydrogenase (NiFe) small subunit HydA YP_004603189.1 1026854 R 717231 CDS YP_004603190.1 336323223 10815261 complement(1028255..1028566) 1 NC_015672.1 PFAM: ABC transporter substrate binding protein; Uncharacterized protein conserved in bacteria (DUF2325); COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR007831; KEGG: cni:Calni_1450 general secretory system II protein e domain protein; PFAM: General secretory system II, protein E, N-terminal; SPTR: General secretory system II protein E domain protein; hypothetical protein 1028566 10815261 Flexsi_0963 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603190.1 1028255 R 717231 CDS YP_004603191.1 336323224 10815262 1028775..1030325 1 NC_015672.1 PFAM: GSPII_E N-terminal domain; COGs: COG1199 Rad3-related DNA helicase; InterPro IPR011545:IPR014001:IPR006555; KEGG: cni:Calni_1449 dead/deah box helicase domain protein; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; SMART: Helicase, ATP-dependent, c2 type; DEAD-like helicase, N-terminal; SPTR: DEAD/DEAH box helicase domain protein; general secretory system II protein E domain-containing protein 1030325 10815262 Flexsi_0964 Flexistipes sinusarabici DSM 4947 general secretory system II protein E domain-containing protein YP_004603191.1 1028775 D 717231 CDS YP_004603192.1 336323225 10815263 1030325..1032115 1 NC_015672.1 PFAM: DEAD_2; DEAD/DEAH box helicase; COGs: COG0166 Glucose-6-phosphate isomerase; HAMAP: Phosphoglucose isomerase (PGI); InterPro IPR001672; KEGG: dap:Dacet_1293 glucose-6-phosphate isomerase; PFAM: Phosphoglucose isomerase (PGI); SPTR: Glucose-6-phosphate isomerase; DEAD/DEAH box helicase 1032115 10815263 Flexsi_0965 Flexistipes sinusarabici DSM 4947 DEAD/DEAH box helicase YP_004603192.1 1030325 D 717231 CDS YP_004603193.1 336323226 10815264 1032102..1033463 1 NC_015672.1 PFAM: Phosphoglucose isomerase; COGs: COG0037 ATPase of the PP-loop superfamily protein implicated in cell cycle control; HAMAP: tRNA(Ile)-lysidine synthase; InterPro IPR011063:IPR012795:IPR012796; KEGG: ddf:DEFDS_1027 cell cycle protein MesJ; PFAM: PP-loop; SPTR: tRNA(Ile)-lysidine synthase; TIGRFAM: Lysidine-tRNA(Ile) synthetase, N-terminal; Lysidine-tRNA(Ile) synthetase, C-terminal; glucose-6-phosphate isomerase 1033463 10815264 Flexsi_0966 Flexistipes sinusarabici DSM 4947 glucose-6-phosphate isomerase YP_004603193.1 1032102 D 717231 CDS YP_004603194.1 336323227 10815265 1033447..1034691 1 NC_015672.1 PFAM: PP-loop family; TIGRFAM: tRNA(Ile)-lysidine synthetase, C-terminal domain; tRNA(Ile)-lysidine synthetase, N-terminal domain; COGs: COG0634 Hypoxanthine-guanine phosphoribosyltransferase; InterPro IPR000836:IPR005904; KEGG: cni:Calni_1446 hypoxanthine phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Hypoxanthine phosphoribosyltransferase; SPTR: Hypoxanthine phosphoribosyltransferase; TIGRFAM: Hypoxanthine phosphoribosyl transferase; tRNA(Ile)-lysidine synthase 1034691 10815265 Flexsi_0967 Flexistipes sinusarabici DSM 4947 tRNA(Ile)-lysidine synthase YP_004603194.1 1033447 D 717231 CDS YP_004603195.1 336323228 10815266 1034694..1035224 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: hypoxanthine phosphoribosyltransferase; COGs: COG0465 ATP-dependent Zn protease; InterProIPR011546:IPR003959:IPR000642:IPR003593:IPR 005936; KEGG: ddf:DEFDS_1029 cell division protein FtsH; PFAM: Peptidase M41; ATPase, AAA-type, core; Peptidase M41, FtsH extracellular; PRIAM: Microtubule-severing ATPase; SMART: ATPase, AAA+ type, core; SPTR: Cell division protein FtsH; TIGRFAM: Peptidase M41, FtsH; hypoxanthine phosphoribosyltransferase 1035224 10815266 Flexsi_0968 Flexistipes sinusarabici DSM 4947 hypoxanthine phosphoribosyltransferase YP_004603195.1 1034694 D 717231 CDS YP_004603196.1 336323229 10815267 1035241..1037142 1 NC_015672.1 PFAM: FtsH Extracellular; Peptidase family M41; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent metalloprotease FtsH; COGs: COG0294 Dihydropteroate synthase; InterPro IPR000489:IPR006390; KEGG: cni:Calni_1444 dihydropteroate synthase; PFAM: Dihydropteroate synthase, DHPS; PRIAM: Dihydropteroate synthase; SPTR: Dihydropteroate synthase; TIGRFAM: Dihydropteroate synthase; ATP-dependent metalloprotease FtsH 1037142 10815267 Flexsi_0969 Flexistipes sinusarabici DSM 4947 ATP-dependent metalloprotease FtsH YP_004603196.1 1035241 D 717231 CDS YP_004603197.1 336323230 10815268 1037114..1038310 1 NC_015672.1 PFAM: Pterin binding enzyme; TIGRFAM: dihydropteroate synthase; COGs: COG1624 conserved hypothetical protein; InterPro IPR003390:IPR014046; KEGG: ddf:DEFDS_1031 hypothetical protein; PFAM: DNA integrity scanning protein, DisA, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00159; dihydropteroate synthase 1038310 10815268 Flexsi_0970 Flexistipes sinusarabici DSM 4947 dihydropteroate synthase YP_004603197.1 1037114 D 717231 CDS YP_004603198.1 336323231 10815269 1038303..1039088 1 NC_015672.1 PFAM: DisA bacterial checkpoint controller nucleotide-binding; TIGRFAM: TIGR00159 family protein; InterPro IPR012505; KEGG: ddf:DEFDS_1032 hypothetical protein; PFAM: YbbR-like; SPTR: Putative uncharacterized protein; hypothetical protein 1039088 10815269 Flexsi_0971 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603198.1 1038303 D 717231 CDS YP_004603199.1 336323232 10815270 1039075..1039977 1 NC_015672.1 PFAM: YbbR-like protein; COGs: COG1109 Phosphomannomutase; InterProIPR005844:IPR005845:IPR005846:IPR005843:IPR 006352; KEGG: ddf:DEFDS_1033 phosphoglucosamine mutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; PRIAM: Phosphoglucosamine mutase; SPTR: Phosphoglucosamine mutase; TIGRFAM: Phosphoglucosamine mutase; hypothetical protein 1039977 10815270 Flexsi_0972 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603199.1 1039075 D 717231 CDS YP_004603200.1 336323233 10815271 1039974..1041335 1 NC_015672.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; TIGRFAM: phosphoglucosamine mutase; COGs: COG0854 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; InterPro IPR004569; KEGG: ddf:DEFDS_1034 pyridoxine 5-phosphate synthase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; PRIAM: Pyridoxine 5'-phosphate synthase; SPTR: Pyridoxine 5'-phosphate synthase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxJ; phosphoglucosamine mutase 1041335 10815271 Flexsi_0973 Flexistipes sinusarabici DSM 4947 phosphoglucosamine mutase YP_004603200.1 1039974 D 717231 CDS YP_004603201.1 336323234 10815272 1041335..1042054 1 NC_015672.1 PFAM: Pyridoxal phosphate biosynthesis protein PdxJ; TIGRFAM: pyridoxine 5'-phosphate synthase; COGs: COG0736 Phosphopantetheinyl transferase (holo-ACP synthase); HAMAP: Holo-[acyl-carrier-protein] synthase; InterPro IPR008278:IPR002582:IPR004568; KEGG: cni:Calni_1439 holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase; SPTR: Holo-[acyl-carrier-protein] synthase; TIGRFAM: Phosphopantethiene-protein transferase; Holo-[acyl carrier protein] synthase; pyridoxine 5'-phosphate synthase 1042054 10815272 Flexsi_0974 Flexistipes sinusarabici DSM 4947 pyridoxine 5'-phosphate synthase YP_004603201.1 1041335 D 717231 CDS YP_004603202.1 336323235 10815273 1042055..1042405 1 NC_015672.1 PFAM: 4'-phosphopantetheinyl transferase superfamily; TIGRFAM: phosphopantethiene--protein transferase domain; holo-[acyl-carrier-protein] synthase; COGs: COG1212 CMP-2-keto-3-deoxyoctulosonic acid synthetase; HAMAP: 3-deoxy-D-manno-octulosonate cytidylyltransferase; InterPro IPR004528:IPR003329; KEGG: ddf:DEFDS_1036 3-deoxy-D-manno-octulosonate cytidylyltransferase; PFAM: Acylneuraminate cytidylyltransferase; PRIAM: 3-deoxy-manno-octulosonate cytidylyltransferase; SPTR: 3-deoxy-manno-octulosonate cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; Holo-(acyl-carrier-protein) synthase 1042405 10815273 Flexsi_0975 Flexistipes sinusarabici DSM 4947 Holo-(acyl-carrier-protein) synthase YP_004603202.1 1042055 D 717231 CDS YP_004603203.1 336323236 10815274 1042402..1043130 1 NC_015672.1 PFAM: Cytidylyltransferase; TIGRFAM: 3-deoxy-D-manno-octulosonate cytidylyltransferase; COGs: COG0504 CTP synthase (UTP-ammonia lyase); HAMAP: CTP synthase; InterPro IPR004468:IPR017456:IPR000991; KEGG: ddf:DEFDS_1037 CTP synthase; PFAM: CTP synthase, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: CTP synthase; SPTR: CTP synthase; TIGRFAM: CTP synthase; 3-deoxy-manno-octulosonate cytidylyltransferase 1043130 10815274 Flexsi_0976 Flexistipes sinusarabici DSM 4947 3-deoxy-manno-octulosonate cytidylyltransferase YP_004603203.1 1042402 D 717231 CDS YP_004603204.1 336323237 10815275 1043127..1044764 1 NC_015672.1 PFAM: Glutamine amidotransferase class-I; CTP synthase N-terminus; TIGRFAM: CTP synthase; COGs: COG2877 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase; InterPro IPR006218:IPR006269; KEGG: ddf:DEFDS_1038 3-deoxy-8-phosphooctulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-8-phosphooctulonate synthase; SPTR: 3-deoxy-8-phosphooctulonate synthase; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; CTP synthase 1044764 10815275 Flexsi_0977 Flexistipes sinusarabici DSM 4947 CTP synthase YP_004603204.1 1043127 D 717231 CDS YP_004603205.1 336323238 10815276 1044761..1045531 1 NC_015672.1 PFAM: DAHP synthetase I family; TIGRFAM: 3-deoxy-8-phosphooctulonate synthase; COGs: COG0794 sugar phosphate isomerase involved in capsule formation; InterPro IPR001347:IPR000644:IPR004800; KEGG: ddf:DEFDS_1039 arabinose-5-phosphate isomerase; PFAM: Sugar isomerase (SIS); Cystathionine beta-synthase, core; PRIAM: Arabinose-5-phosphate isomerase; SMART: Cystathionine beta-synthase, core; SPTR: Arabinose-5-phosphate isomerase; TIGRFAM: KpsF/GutQ; 2-dehydro-3-deoxyphosphooctonate aldolase 1045531 10815276 Flexsi_0978 Flexistipes sinusarabici DSM 4947 2-dehydro-3-deoxyphosphooctonate aldolase YP_004603205.1 1044761 D 717231 CDS YP_004603206.1 336323239 10815277 1045528..1046490 1 NC_015672.1 PFAM: CBS domain; SIS domain; TIGRFAM: KpsF/GutQ family protein; COGs: COG1778 Low specificity phosphatase (HAD superfamily); InterPro IPR005834:IPR010023:IPR006549; KEGG: ddf:DEFDS_1040 3-deoxy-manno-octulosonate-8-phosphatase; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: 3-deoxy-manno-octulosonate-8-phosphatase; SPTR: 3-deoxy-manno-octulosonate-8-phosphatase; TIGRFAM: Phosphatase KdsC; HAD-superfamily hydrolase, subfamily IIIA; KpsF/GutQ family protein 1046490 10815277 Flexsi_0979 Flexistipes sinusarabici DSM 4947 KpsF/GutQ family protein YP_004603206.1 1045528 D 717231 CDS YP_004603207.1 336323240 10815278 1046490..1046984 1 NC_015672.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family; InterPro IPR010664; KEGG: ddf:DEFDS_1041 hypothetical protein; PFAM: Protein of unknown function DUF1239; SPTR: Putative uncharacterized protein; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 1046984 10815278 Flexsi_0980 Flexistipes sinusarabici DSM 4947 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_004603207.1 1046490 D 717231 CDS YP_004603208.1 336323241 10815279 1046954..1047499 1 NC_015672.1 PFAM: Protein of unknown function (DUF1239); COGs: COG1934 conserved hypothetical protein; InterPro IPR005653; KEGG: cni:Calni_1432 OstA family protein; PFAM: OstA-like protein; SPTR: OstA family protein; hypothetical protein 1047499 10815279 Flexsi_0981 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603208.1 1046954 D 717231 CDS YP_004603209.1 336323242 10815280 1047489..1048013 1 NC_015672.1 PFAM: OstA-like protein; TIGRFAM: lipopolysaccharide transport periplasmic protein LptA; COGs: COG1137 ABC-type (unclassified) transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dap:Dacet_1308 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; OstA family protein 1048013 10815280 Flexsi_0982 Flexistipes sinusarabici DSM 4947 OstA family protein YP_004603209.1 1047489 D 717231 CDS YP_004603210.1 336323243 10815281 1047955..1048695 1 NC_015672.1 PFAM: ABC transporter; COGs: COG1508 DNA-directed RNA polymerase specialized sigma subunit sigma54 homolog; InterPro IPR000394:IPR007046:IPR007634; KEGG: ddf:DEFDS_1044 DNA-directed RNA polymerase sigma 54 factor; PFAM: RNA polymerase sigma factor 54, DNA-binding; RNA polymerase sigma factor 54, core-binding; RNA polymerase sigma factor 54; SPTR: DNA-directed RNA polymerase sigma 54 factor; TIGRFAM: RNA polymerase sigma factor 54; sulfate-transporting ATPase 1048695 10815281 Flexsi_0983 Flexistipes sinusarabici DSM 4947 sulfate-transporting ATPase YP_004603210.1 1047955 D 717231 CDS YP_004603211.1 336323244 10815282 1048697..1050088 1 NC_015672.1 PFAM: Sigma-54 factor, Activator interacting domain (AID); Sigma-54, DNA binding domain; Sigma-54 factor, core binding domain; TIGRFAM: RNA polymerase sigma-54 factor; COGs: COG1544 Ribosome-associated protein Y (PSrp-1); InterPro IPR003489; KEGG: ddf:DEFDS_1045 sigma 54 modulation protein/ribosomal protein S30EA; PFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; SPTR: Sigma 54 modulation protein/ribosomal protein S30EA; TIGRFAM: Ribosomal protein S30Ae/sigma 54 modulation protein; RNA polymerase sigma 54 subunit RpoN 1050088 10815282 Flexsi_0984 Flexistipes sinusarabici DSM 4947 RNA polymerase sigma 54 subunit RpoN YP_004603211.1 1048697 D 717231 CDS YP_004603212.1 336323245 10815283 1050090..1050623 1 NC_015672.1 PFAM: Sigma 54 modulation protein / S30EA ribosomal protein; TIGRFAM: ribosomal subunit interface protein; COGs: COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type); InterPro IPR002178; KEGG: ddf:DEFDS_1046 PTS system fructose-specific transporter subunit IIA; PFAM: Phosphotransferase system, phosphoenolpyruvate-dependent sugar EIIA 2; SPTR: PTS system, fructose-specific enzyme II, A component; sigma 54 modulation protein/30S ribosomal protein S30EA 1050623 10815283 Flexsi_0985 Flexistipes sinusarabici DSM 4947 sigma 54 modulation protein/30S ribosomal protein S30EA YP_004603212.1 1050090 D 717231 CDS YP_004603213.1 336323246 10815284 1050633..1051094 1 NC_015672.1 PFAM: Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; TIGRFAM: PTS system, fructose subfamily, IIA component; COGs: COG1493 Serine kinase of the HPr protein regulates carbohydrate metabolism; HAMAP: HPr kinase/phosphorylase; InterPro IPR011126:IPR011104; KEGG: cni:Calni_1427 hpr(ser) kinase/phosphatase; PFAM: Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, C-terminal; Signal transduction serine kinase/phosphorylase, HPr(Ser) kinase, N-terminal; SPTR: HPr kinase/phosphorylase; putative PTS IIA-like nitrogen-regulatory protein PtsN 1051094 10815284 Flexsi_0986 Flexistipes sinusarabici DSM 4947 putative PTS IIA-like nitrogen-regulatory protein PtsN YP_004603213.1 1050633 D 717231 CDS YP_004603214.1 336323247 10815285 1051094..1052071 1 NC_015672.1 PFAM: HPr Serine kinase N terminus; HPr Serine kinase C-terminal domain; TIGRFAM: Hpr(Ser) kinase/phosphatase; COGs: COG1660 P-loop-containing kinase; HAMAP: ATPase, P-loop-containing; InterPro IPR005337; KEGG: cni:Calni_1426 hypothetical protein; SPTR: UPF0042 nucleotide-binding protein Calni_1426; HPr kinase 1052071 10815285 Flexsi_0987 Flexistipes sinusarabici DSM 4947 HPr kinase YP_004603214.1 1051094 D 717231 CDS YP_004603215.1 336323248 10815286 1052072..1052926 1 NC_015672.1 PFAM: P-loop ATPase protein family; COGs: COG2893 Phosphotransferase system mannose/fructose-specific component IIA; InterPro IPR004701; KEGG: cni:Calni_1425 pts system fructose subfamily IIA component; PFAM: Phosphotransferase system, fructose subfamily IIA component; SPTR: PTS system fructose subfamily IIA component; hypothetical protein 1052926 10815286 Flexsi_0988 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603215.1 1052072 D 717231 CDS YP_004603216.1 336323249 10815287 1052928..1053326 1 NC_015672.1 PFAM: PTS system fructose IIA component; TIGRFAM: PTS system, mannose/fructose/sorbose family, IIA component; COGs: COG3444 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IIB; InterPro IPR004720; KEGG: ddf:DEFDS_1050 PTS system fructose-specific transporter subunit IIB; PFAM: Phosphotransferase system, sorbose subfamily IIB component; SPTR: PTS system, fructose-specific enzyme II, B component; PTS system fructose subfamily transporter subunit IIA 1053326 10815287 Flexsi_0989 Flexistipes sinusarabici DSM 4947 PTS system fructose subfamily transporter subunit IIA YP_004603216.1 1052928 D 717231 CDS YP_004603217.1 336323250 10815288 1053323..1053811 1 NC_015672.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: ddf:DEFDS_1051 hypothetical protein; SPTR: Putative uncharacterized protein; PTS system sorbose subfamily transporter subunit IIB 1053811 10815288 Flexsi_0990 Flexistipes sinusarabici DSM 4947 PTS system sorbose subfamily transporter subunit IIB YP_004603217.1 1053323 D 717231 CDS YP_004603218.1 336323251 10815289 1053813..1054466 1 NC_015672.1 COGs: COG3716 Phosphotransferase system mannose/fructose/N-acetylgalactosamine-specific component IID; InterPro IPR004704; KEGG: ddf:DEFDS_1052 hypothetical protein; PFAM: Phosphotransferase system, mannose/fructose/sorbose family IID component; SPTR: Putative uncharacterized protein; hypothetical protein 1054466 10815289 Flexsi_0991 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603218.1 1053813 D 717231 CDS YP_004603219.1 336323252 10815290 1054451..1055161 1 NC_015672.1 PFAM: PTS system mannose/fructose/sorbose family IID component; COGs: COG1925 Phosphotransferase system HPr-related protein; InterPro IPR005698; KEGG: cni:Calni_1421 phosphotransferase system, phosphocarrier protein hpr; PFAM: Phosphotransferase system, phosphocarrier HPr protein; SPTR: Phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: Phosphotransferase system, phosphocarrier HPr protein; PTS system mannose/fructose/sorbose family transporter subunit IID 1055161 10815290 Flexsi_0992 Flexistipes sinusarabici DSM 4947 PTS system mannose/fructose/sorbose family transporter subunit IID YP_004603219.1 1054451 D 717231 CDS YP_004603220.1 336323253 10815291 1055184..1055450 1 NC_015672.1 PFAM: PTS HPr component phosphorylation site; TIGRFAM: Phosphotransferase System HPr (HPr) Family; COGs: COG1080 Phosphoenolpyruvate-protein kinase (PTS system EI component); InterPro IPR008731:IPR008279:IPR000121:IPR006318; KEGG: ddf:DEFDS_1054 PTS system transporter enzyme I; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; PEP-utilising enzyme, mobile region; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SPTR: PTS system, enzyme I, phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: Phosphoenolpyruvate-protein phosphotransferase; phosphotransferase system, phosphocarrier protein HPr 1055450 10815291 Flexsi_0993 Flexistipes sinusarabici DSM 4947 phosphotransferase system, phosphocarrier protein HPr YP_004603220.1 1055184 D 717231 CDS YP_004603221.1 336323254 10815292 1055447..1057189 1 NC_015672.1 PFAM: PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; KEGG: ddf:DEFDS_2164 hypothetical protein; SPTR: Putative uncharacterized protein; phosphoenolpyruvate-protein phosphotransferase 1057189 10815292 Flexsi_0994 Flexistipes sinusarabici DSM 4947 phosphoenolpyruvate-protein phosphotransferase YP_004603221.1 1055447 D 717231 CDS YP_004603222.1 336323255 10815293 1057201..1057710 1 NC_015672.1 PFAM: Predicted permease; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: sfu:Sfum_0231 PAS/PAC sensor hybrid histidine kinase; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; hypothetical protein 1057710 10815293 Flexsi_0995 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603222.1 1057201 D 717231 CDS YP_004603223.1 336323256 10815294 1057765..1058160 1 NC_015672.1 PFAM: Response regulator receiver domain; response regulator receiver protein 1058160 10815294 Flexsi_0996 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004603223.1 1057765 D 717231 CDS YP_004603224.1 336323257 10815296 1058390..1059499 1 NC_015672.1 PFAM: NIF3 (NGG1p interacting factor 3); TIGRFAM: dinuclear metal center protein, YbgI/SA1388 family; COGs: COG1579 Zn-ribbon protein possibly nucleic acid-binding; InterPro IPR003743; KEGG: ddf:DEFDS_1484 hypothetical protein; PFAM: Protein of unknown function DUF164; SPTR: Putative uncharacterized protein; NGG1p interacting factor 3 protein, NIF3 1059499 10815296 Flexsi_0997 Flexistipes sinusarabici DSM 4947 NGG1p interacting factor 3 protein, NIF3 YP_004603224.1 1058390 D 717231 CDS YP_004603225.1 336323258 10815297 1059502..1060236 1 NC_015672.1 PFAM: Putative zinc ribbon domain; COGs: COG0328 Ribonuclease HI; InterPro IPR002156; KEGG: ddf:DEFDS_1483 ribonuclease HI; PFAM: Ribonuclease H; SPTR: Ribonuclease HI; hypothetical protein 1060236 10815297 Flexsi_0998 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603225.1 1059502 D 717231 CDS YP_004603226.1 336323259 10815298 1060237..1060677 1 NC_015672.1 PFAM: RNase H; COGs: COG0428 divalent heavy-metal cations transporter; InterPro IPR003689; KEGG: cbi:CLJ_B1218 zinc transporter, ZIP family; PFAM: Zinc/iron permease; SPTR: Zinc transporter, ZIP family; ribonuclease H 1060677 10815298 Flexsi_0999 Flexistipes sinusarabici DSM 4947 ribonuclease H YP_004603226.1 1060237 D 717231 CDS YP_004603227.1 336323260 10815299 1061146..1061883 1 NC_015672.1 PFAM: ZIP Zinc transporter; KEGG: ddf:DEFDS_1480 hypothetical protein; SPTR: Putative uncharacterized protein; zinc/iron permease 1061883 10815299 Flexsi_1000 Flexistipes sinusarabici DSM 4947 zinc/iron permease YP_004603227.1 1061146 D 717231 CDS YP_004603228.1 336323261 10815300 1062121..1062642 1 NC_015672.1 COGs: COG0313 methyltransferase; HAMAP: Ribosomal RNA small subunit methyltransferase I; InterPro IPR000878:IPR008189; KEGG: ddf:DEFDS_0501 tetrapyrrole methylase family protein; PFAM: Tetrapyrrole methylase; SPTR: Ribosomal RNA small subunit methyltransferase I; TIGRFAM: Uncharacterised protein family UPF0011; hypothetical protein 1062642 10815300 Flexsi_1001 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603228.1 1062121 D 717231 CDS YP_004603229.1 336323262 10815301 complement(1062631..1063431) 1 NC_015672.1 PFAM: Tetrapyrrole (Corrin/Porphyrin) Methylases; TIGRFAM: probable S-adenosylmethionine-dependent methyltransferase, YraL family; KEGG: ddf:DEFDS_0502 hypothetical protein; SPTR: Putative uncharacterized protein; ribosomal RNA small subunit methyltransferase I 1063431 10815301 Flexsi_1002 Flexistipes sinusarabici DSM 4947 ribosomal RNA small subunit methyltransferase I YP_004603229.1 1062631 R 717231 CDS YP_004603230.1 336323263 10815302 complement(1063434..1063847) 1 NC_015672.1 PFAM: Protein of unknown function (DUF2914); COGs: COG0492 Thioredoxin reductase; InterPro IPR013027:IPR005982; KEGG: ddf:DEFDS_0503 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Thioredoxin-disulfide reductase; SPTR: Thioredoxin reductase; TIGRFAM: Thioredoxin reductase; hypothetical protein 1063847 10815302 Flexsi_1003 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603230.1 1063434 R 717231 CDS YP_004603231.1 336323264 10815303 complement(1063861..1064817) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; TIGRFAM: thioredoxin-disulfide reductase; KEGG: cni:Calni_1309 hypothetical protein; SPTR: Putative uncharacterized protein; thioredoxin reductase 1064817 10815303 Flexsi_1004 Flexistipes sinusarabici DSM 4947 thioredoxin reductase YP_004603231.1 1063861 R 717231 CDS YP_004603232.1 336323265 10815304 complement(1064967..1065227) 1 NC_015672.1 COGs: COG0157 Nicotinate-nucleotide pyrophosphorylase; InterPro IPR002638:IPR004393; KEGG: ddf:DEFDS_0506 nicotinate-nucleotide pyrophosphorylase carboxylating; PFAM: Quinolinate phosphoribosyl transferase; PRIAM: Nicotinate-nucleotide diphosphorylase (carboxylating); SPTR: Nicotinate-nucleotide pyrophosphorylase, carboxylating; TIGRFAM: Nicotinate-nucleotide pyrophosphorylase; hypothetical protein 1065227 10815304 Flexsi_1005 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603232.1 1064967 R 717231 CDS YP_004603233.1 336323266 10815305 complement(1065220..1066065) 1 NC_015672.1 PFAM: Quinolinate phosphoribosyl transferase, C-terminal domain; Quinolinate phosphoribosyl transferase, N-terminal domain; TIGRFAM: nicotinate-nucleotide pyrophosphorylase; COGs: COG0525 Valyl-tRNA synthetase; HAMAP: Valyl-tRNA synthetase; InterPro IPR002300:IPR013155:IPR019499:IPR002303; KEGG: ddf:DEFDS_0507 valyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ia; Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; Valyl-tRNA synthetase, class Ia, tRNA binding arm; PRIAM: Valine--tRNA ligase; SPTR: Valyl-tRNA synthetase; TIGRFAM: Valyl-tRNA synthetase, class Ia; nicotinate-nucleotide pyrophosphorylase 1066065 10815305 Flexsi_1006 Flexistipes sinusarabici DSM 4947 nicotinate-nucleotide pyrophosphorylase YP_004603233.1 1065220 R 717231 CDS YP_004603234.1 336323267 10815306 complement(1066059..1068689) 1 NC_015672.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; Valyl tRNA synthetase tRNA binding arm; TIGRFAM: valyl-tRNA synthetase; KEGG: cni:Calni_1313 hypothetical protein; SPTR: Putative uncharacterized protein; valyl-tRNA synthetase 1068689 10815306 Flexsi_1007 Flexistipes sinusarabici DSM 4947 valyl-tRNA synthetase YP_004603234.1 1066059 R 717231 CDS YP_004603235.1 336323268 10815307 complement(1068863..1069075) 1 NC_015672.1 COGs: COG0802 ATPase or kinase; InterPro IPR003442; KEGG: ddf:DEFDS_0509 hypothetical protein; PFAM: Uncharacterised protein family UPF0079, ATPase bacteria; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0079, ATPase bacteria; hypothetical protein 1069075 10815307 Flexsi_1008 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603235.1 1068863 R 717231 CDS YP_004603236.1 336323269 10815308 complement(1069191..1069613) 1 NC_015672.1 PFAM: Uncharacterised P-loop hydrolase UPF0079; TIGRFAM: ATPase, YjeE family; COGs: COG0063 sugar kinase; InterPro IPR004443:IPR000631; KEGG: ddf:DEFDS_0510 hypothetical protein; PFAM: YjeF-related protein, N-terminal; Uncharacterised protein family, carbohydrate kinase-related; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family, carbohydrate kinase-related; YjeF-related protein, N-terminal; hypothetical protein 1069613 10815308 Flexsi_1009 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603236.1 1069191 R 717231 CDS YP_004603237.1 336323270 10815309 complement(1069591..1071105) 1 NC_015672.1 PFAM: Carbohydrate kinase; YjeF-related protein N-terminus; TIGRFAM: yjeF C-terminal region, hydroxyethylthiazole kinase-related; yjeF N-terminal region; COGs: COG2870 ADP-heptose synthase bifunctional sugar kinase/adenylyltransferase; InterPro IPR011611:IPR011913; KEGG: cni:Calni_1316 rfae bifunctional protein; PFAM: Carbohydrate/purine kinase; SPTR: RfaE bifunctional protein; TIGRFAM: RfaE bifunctional protein, domain I; YjeF-like protein 1071105 10815309 Flexsi_1010 Flexistipes sinusarabici DSM 4947 YjeF-like protein YP_004603237.1 1069591 R 717231 CDS YP_004603238.1 336323271 10815310 complement(1071105..1072094) 1 NC_015672.1 PFAM: pfkB family carbohydrate kinase; TIGRFAM: rfaE bifunctional protein, domain I; InterPro IPR005651; KEGG: ddf:DEFDS_0512 hypothetical protein; PFAM: Protein of unknown function DUF343; SPTR: Putative uncharacterized protein; rfaE bifunctional protein 1072094 10815310 Flexsi_1011 Flexistipes sinusarabici DSM 4947 rfaE bifunctional protein YP_004603238.1 1071105 R 717231 CDS YP_004603239.1 336323272 10815311 complement(1072101..1072286) 1 NC_015672.1 PFAM: Trm112p-like protein; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 1072286 10815311 Flexsi_1012 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603239.1 1072101 R 717231 CDS YP_004603240.1 336323273 10815312 complement(1072566..1073885) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG1593 TRAP-type C4-dicarboxylate transport system large permease component; InterPro IPR010656:IPR004681; KEGG: ddf:DEFDS_0684 C4-dicarboxylate transporter large subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: C4-dicarboxylate transporter, large subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; transposase IS4 family protein 1073885 10815312 Flexsi_1013 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603240.1 1072566 R 717231 CDS YP_004603241.1 336323274 10815313 complement(1074173..1075456) 1 NC_015672.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG3090 TRAP-type C4-dicarboxylate transport system small permease component; InterPro IPR007387; KEGG: ddf:DEFDS_0683 C4-dicarboxylate transporter small subunit; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: C4-dicarboxylate transporter, small subunit; TRAP dicarboxylate transporter subunit DctM 1075456 10815313 Flexsi_1014 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctM YP_004603241.1 1074173 R 717231 CDS YP_004603242.1 336323275 10815314 complement(1075459..1075971) 1 NC_015672.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: ddf:DEFDS_0682 C4-dicarboxylate transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: C4-dicarboxylate transporter, substrate-binding protein; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 1075971 10815314 Flexsi_1015 Flexistipes sinusarabici DSM 4947 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004603242.1 1075459 R 717231 CDS YP_004603243.1 336323276 10815315 complement(1076029..1077018) 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; manually curated; TRAP dicarboxylate transporter subunit DctP 1077018 10815315 Flexsi_1016 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctP YP_004603243.1 1076029 R 717231 CDS YP_004603244.1 336323277 10815317 1078336..1079094 1 NC_015672.1 PFAM: ABC transporter; COGs: COG1108 ABC-type Mn2+/Zn2+ transport systems permease components; InterPro IPR001626; KEGG: sfu:Sfum_2735 ABC-3 protein; PFAM: ABC-3; SPTR: ABC-3 protein; phosphonate-transporting ATPase 1079094 10815317 Flexsi_1018 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004603244.1 1078336 D 717231 CDS YP_004603245.1 336323278 10815318 1079105..1079920 1 NC_015672.1 PFAM: ABC 3 transport family; COGs: COG0219 rRNA methylase (SpoU class); InterPro IPR001537; KEGG: cni:Calni_1256 tRNA/rRNA methyltransferase (SpoU); PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: Putative tRNA (cytidine/uridine-2'-O-)-methyltransferase Calni_1256; ABC transporter 1079920 10815318 Flexsi_1019 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603245.1 1079105 D 717231 CDS YP_004603246.1 336323279 10815319 1079923..1080390 1 NC_015672.1 PFAM: SpoU rRNA Methylase family; TIGRFAM: rRNA methylase, putative, group 2; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR013656:IPR003661:IPR003594; KEGG: ddf:DEFDS_1377 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold-4; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative uncharacterized protein; tRNA/rRNA methyltransferase SpoU 1080390 10815319 Flexsi_1020 Flexistipes sinusarabici DSM 4947 tRNA/rRNA methyltransferase SpoU YP_004603246.1 1079923 D 717231 CDS YP_004603247.1 336323280 10815320 1080387..1082579 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_1376 two-component system, NtrC family, response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, response regulator; multi-sensor signal transduction histidine kinase 1082579 10815320 Flexsi_1021 Flexistipes sinusarabici DSM 4947 multi-sensor signal transduction histidine kinase YP_004603247.1 1080387 D 717231 CDS YP_004603248.1 336323281 10815321 1082569..1083930 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG1638 TRAP-type C4-dicarboxylate transport system periplasmic component; InterPro IPR018389:IPR004682; KEGG: cni:Calni_1703 trap dicarboxylate transporter, dCTP subunit; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: TRAP dicarboxylate transporter, DctP subunit; TIGRFAM: TRAP dicarboxylate transporter, DctP subunit; Fis family two component sigma-54 specific transcriptional regulator 1083930 10815321 Flexsi_1022 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004603248.1 1082569 D 717231 CDS YP_004603249.1 336323282 10815322 1083933..1084925 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; TIGRFAM: tripartite ATP-independent periplasmic transporter solute receptor, DctP family; TRAP dicarboxylate transporter subunit DctP 1084925 10815322 Flexsi_1023 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctP YP_004603249.1 1083933 D 717231 CDS YP_004603250.1 336323283 10815323 1084949..1085257 1 NC_015672.1 KEGG: cni:Calni_1704 trap C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP C4-dicarboxylate transport system permease DctM subunit; hypothetical protein 1085257 10815323 Flexsi_1024 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603250.1 1084949 D 717231 CDS YP_004603251.1 336323284 10815324 1085242..1086468 1 NC_015672.1 COGs: COG2264 Ribosomal protein L11 methylase; InterPro IPR010456; KEGG: cni:Calni_1255 ribosomal L11 methyltransferase; PFAM: Ribosomal L11 methyltransferase; SPTR: Ribosomal L11 methyltransferase; TRAP dicarboxylate transporter subunit DctM 1086468 10815324 Flexsi_1025 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctM YP_004603251.1 1085242 D 717231 CDS YP_004603252.1 336323285 10815325 1086478..1087257 1 NC_015672.1 PFAM: Ribosomal protein L11 methyltransferase (PrmA); TIGRFAM: ribosomal protein L11 methyltransferase; InterPro IPR004843; KEGG: ddf:DEFDS_1372 metallophosphoesterase; PFAM: Metallophosphoesterase; SPTR: Metallophosphoesterase; ribosomal L11 methyltransferase 1087257 10815325 Flexsi_1026 Flexistipes sinusarabici DSM 4947 ribosomal L11 methyltransferase YP_004603252.1 1086478 D 717231 CDS YP_004603253.1 336323286 10815326 1087254..1088030 1 NC_015672.1 PFAM: Calcineurin-like phosphoesterase; COGs: COG1385 conserved hypothetical protein; InterPro IPR006700; KEGG: cni:Calni_1254 hypothetical protein; PFAM: Ribosomal RNA small subunit methyltransferase E; SPTR: Putative uncharacterized protein; TIGRFAM: Ribosomal RNA small subunit methyltransferase E; metallophosphoesterase 1088030 10815326 Flexsi_1027 Flexistipes sinusarabici DSM 4947 metallophosphoesterase YP_004603253.1 1087254 D 717231 CDS YP_004603254.1 336323287 10815327 1088018..1088722 1 NC_015672.1 PFAM: RNA methyltransferase; TIGRFAM: RNA methyltransferase, RsmE family; COGs: COG0590 Cytosine/adenosine deaminase; InterPro IPR002125; KEGG: cni:Calni_1253 cmp/dcmp deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: CMP/dCMP deaminase zinc-binding protein; ribosomal RNA small subunit methyltransferase E 1088722 10815327 Flexsi_1028 Flexistipes sinusarabici DSM 4947 ribosomal RNA small subunit methyltransferase E YP_004603254.1 1088018 D 717231 CDS YP_004603255.1 336323288 10815328 1088715..1089185 1 NC_015672.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; InterPro IPR002514; KEGG: has:Halsa_0053 transposase IS3/IS911 family protein; PFAM: Transposase IS3/IS911; SPTR: Transposase IS3/IS911 family protein; CMP/dCMP deaminase zinc-binding protein 1089185 10815328 Flexsi_1029 Flexistipes sinusarabici DSM 4947 CMP/dCMP deaminase zinc-binding protein YP_004603255.1 1088715 D 717231 CDS YP_004603256.1 336323289 10815329 1089325..1089633 1 NC_015672.1 PFAM: Transposase; COGs: COG2801 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: afl:Aflv_2449 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase; manually curated; transposase IS3/IS911 family protein 1089633 10815329 Flexsi_1030 Flexistipes sinusarabici DSM 4947 transposase IS3/IS911 family protein YP_004603256.1 1089325 D 717231 CDS YP_004603257.1 336323290 10815330 1089666..1090499 1 NC_015672.1 PFAM: Integrase core domain; integrase catalytic subunit 1090499 10815330 Flexsi_1031 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004603257.1 1089666 D 717231 CDS YP_004603258.1 336323291 10815331 1090492..1090794 1 NC_015672.1 COGs: COG1651 Protein-disulfide isomerase; KEGG: cni:Calni_1066 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1090794 10815331 Flexsi_1032 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603258.1 1090492 D 717231 CDS YP_004603259.1 336323292 10815332 1090954..1091895 1 NC_015672.1 COGs: COG0825 Acetyl-CoA carboxylase alpha subunit; HAMAP: Acetyl-CoA carboxylase, alpha subunit; InterPro IPR001095:IPR020582; KEGG: ddf:DEFDS_1173 acetyl-CoA carboxylase carboxyl transferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region; PRIAM: Acetyl-CoA carboxylase; SPTR: Acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha; TIGRFAM: Acetyl-CoA carboxylase, alpha subunit; hypothetical protein 1091895 10815332 Flexsi_1033 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603259.1 1090954 D 717231 CDS YP_004603260.1 336323293 10815333 1091933..1092892 1 NC_015672.1 PFAM: Acetyl co-enzyme A carboxylase carboxyltransferase alpha subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; COGs: COG0323 DNA mismatch repair enzyme (predicted ATPase); HAMAP: DNA mismatch repair protein mutL; InterPro IPR003594:IPR013507:IPR014790:IPR014763; KEGG: cni:Calni_1068 DNA mismatch repair protein MutL; PFAM: MutL, C-terminal, dimerisation; DNA mismatch repair protein, C-terminal; ATP-binding region, ATPase-like; SPTR: DNA mismatch repair protein mutL; TIGRFAM: DNA mismatch repair protein, N-terminal; acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 1092892 10815333 Flexsi_1034 Flexistipes sinusarabici DSM 4947 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha YP_004603260.1 1091933 D 717231 CDS YP_004603261.1 336323294 10815334 1092879..1094603 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; MutL C terminal dimerisation domain; DNA mismatch repair protein, C-terminal domain; TIGRFAM: DNA mismatch repair protein MutL; COGs: COG0324 tRNA delta(2)-isopentenylpyrophosphate transferase; HAMAP: tRNA dimethylallyltransferase; InterPro IPR002627:IPR018022; KEGG: ddf:DEFDS_1175 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase; PRIAM: tRNA isopentenyltransferase; SPTR: tRNA dimethylallyltransferase; TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; DNA mismatch repair protein mutL 1094603 10815334 Flexsi_1035 Flexistipes sinusarabici DSM 4947 DNA mismatch repair protein mutL YP_004603261.1 1092879 D 717231 CDS YP_004603262.1 336323295 10815335 1094600..1095523 1 NC_015672.1 PFAM: IPP transferase; TIGRFAM: tRNA dimethylallyltransferase; COGs: COG1923 Uncharacterized host factor I protein; InterPro IPR001163:IPR005001; KEGG: ddf:DEFDS_1085 RNA-binding protein Hfq; PFAM: Like-Sm ribonucleoprotein, core; SPTR: Protein hfq; TIGRFAM: Host factor Hfq; tRNA dimethylallyltransferase 1095523 10815335 Flexsi_1036 Flexistipes sinusarabici DSM 4947 tRNA dimethylallyltransferase YP_004603262.1 1094600 D 717231 CDS YP_004603263.1 336323296 10815336 1095719..1095943 1 NC_015672.1 PFAM: LSM domain; TIGRFAM: RNA chaperone Hfq; KEGG: ddf:DEFDS_1086 hypothetical protein; SPTR: Putative uncharacterized protein; RNA chaperone Hfq 1095943 10815336 Flexsi_1037 Flexistipes sinusarabici DSM 4947 RNA chaperone Hfq YP_004603263.1 1095719 D 717231 CDS YP_004603264.1 336323297 10815337 1095959..1096474 1 NC_015672.1 KEGG: cni:Calni_1667 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1096474 10815337 Flexsi_1038 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603264.1 1095959 D 717231 CDS YP_004603265.1 336323298 10815338 1096675..1097844 1 NC_015672.1 InterPro IPR007060; KEGG: ddf:DEFDS_1089 cell division protein FtsB; PFAM: Septum formation initiator; SPTR: Cell division protein FtsB; hypothetical protein 1097844 10815338 Flexsi_1039 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603265.1 1096675 D 717231 CDS YP_004603266.1 336323299 10815339 1097841..1098149 1 NC_015672.1 PFAM: Septum formation initiator; COGs: COG1570 Exonuclease VII large subunit; HAMAP: Exodeoxyribonuclease 7 large subunit; InterPro IPR004365:IPR020579:IPR003753; KEGG: ddf:DEFDS_1090 exodeoxyribonuclease VII large subunit; PFAM: Exonuclease VII, large subunit, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; SPTR: Exodeoxyribonuclease 7 large subunit; TIGRFAM: Exonuclease VII, large subunit; septum formation initiator 1098149 10815339 Flexsi_1040 Flexistipes sinusarabici DSM 4947 septum formation initiator YP_004603266.1 1097841 D 717231 CDS YP_004603267.1 336323300 10815340 1098109..1099458 1 NC_015672.1 PFAM: Exonuclease VII, large subunit; OB-fold nucleic acid binding domain; TIGRFAM: exodeoxyribonuclease VII, large subunit; COGs: COG0782 Transcription elongation factor; HAMAP: Transcription elongation factor greA; InterPro IPR001437:IPR006359; KEGG: ddf:DEFDS_1091 transcription elongation factor GreA; PFAM: Transcription elongation factor, GreA/GreB region, prokaryotic; SPTR: Transcription elongation factor greA; TIGRFAM: Prokaryotic transcription elongation factor GreA; exodeoxyribonuclease 7 large subunit 1099458 10815340 Flexsi_1041 Flexistipes sinusarabici DSM 4947 exodeoxyribonuclease 7 large subunit YP_004603267.1 1098109 D 717231 CDS YP_004603268.1 336323301 10815341 1099451..1099924 1 NC_015672.1 PFAM: domain; Transcription elongation factor, GreA/GreB, C-term; TIGRFAM: transcription elongation factor GreA; This gene is disrupted by insertion of repetitive element; manually curated; transcription elongation factor GreA 1099924 10815341 Flexsi_1042 Flexistipes sinusarabici DSM 4947 transcription elongation factor GreA YP_004603268.1 1099451 D 717231 CDS YP_004603269.1 336323302 10815343 1101047..1102096 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0558 Phosphatidylglycerophosphate synthase; InterPro IPR000462:IPR004570; KEGG: cni:Calni_1662 cdp-diacylglycerol/glycerol-3-phosphate3-phospha tidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase; SPTR:CDP-diacylglycerol/glycerol-3-phosphate3-phosp hatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; transposase IS4 family protein 1102096 10815343 Flexsi_1044 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603269.1 1101047 D 717231 CDS YP_004603270.1 336323303 10815344 1102627..1103172 1 NC_015672.1 PFAM: CDP-alcohol phosphatidyltransferase; TIGRFAM: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; COGs: COG2006 conserved hypothetical protein; InterPro IPR007160:IPR001450; KEGG: dap:Dacet_1321 hypothetical protein; PFAM: Protein of unknown function DUF362; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase 1103172 10815344 Flexsi_1045 Flexistipes sinusarabici DSM 4947 CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase YP_004603270.1 1102627 D 717231 CDS YP_004603271.1 336323304 10815345 1103165..1104247 1 NC_015672.1 PFAM: Domain of unknown function (DUF362); COGs: COG0344 membrane protein; HAMAP: Protein of unknown function DUF205; InterPro IPR003811:IPR020788; KEGG: ddf:DEFDS_1095 hypothetical protein; PFAM: Protein of unknown function DUF205; SPTR: Glycerol-3-phosphate acyltransferase; TIGRFAM: Membrane protein YgiH; hypothetical protein 1104247 10815345 Flexsi_1046 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603271.1 1103165 D 717231 CDS YP_004603272.1 336323305 10815346 1104244..1104843 1 NC_015672.1 PFAM: Domain of unknown function (DUF205); TIGRFAM: acyl-phosphate glycerol 3-phosphate acyltransferase; COGs: COG0117 Pyrimidine deaminase; InterPro IPR002125:IPR002734:IPR004794:IPR011549; KEGG: cni:Calni_1660 riboflavin biosynthesis protein RibD; PFAM: Bacterial bifunctional deaminase-reductase, C-terminal; CMP/dCMP deaminase, zinc-binding; PRIAM: Diaminohydroxyphosphoribosylaminopyrimidine deaminase., 5-amino-6-(5-phosphoribosylamino)uracil reductase; SPTR: Riboflavin biosynthesis protein RibD; TIGRFAM: Riboflavin biosynthesis protein RibD; Riboflavin-specific deaminase, C-terminal; glycerol-3-phosphate acyltransferase 1104843 10815346 Flexsi_1047 Flexistipes sinusarabici DSM 4947 glycerol-3-phosphate acyltransferase YP_004603272.1 1104244 D 717231 CDS YP_004603273.1 336323306 10815347 1104836..1105993 1 NC_015672.1 PFAM: RibD C-terminal domain; Cytidine and deoxycytidylate deaminase zinc-binding region; TIGRFAM: riboflavin-specific deaminase C-terminal domain; riboflavin biosynthesis protein RibD; COGs: COG0307 Riboflavin synthase alpha chain; InterPro IPR001783; KEGG: ddf:DEFDS_1097 riboflavin synthase subunit alpha; PFAM: Lumazine-binding protein; PRIAM: Riboflavin synthase; SPTR: Riboflavin synthase, alpha subunit; TIGRFAM: Lumazine-binding protein; riboflavin biosynthesis protein RibD 1105993 10815347 Flexsi_1048 Flexistipes sinusarabici DSM 4947 riboflavin biosynthesis protein RibD YP_004603273.1 1104836 D 717231 CDS YP_004603274.1 336323307 10815348 1105978..1106631 1 NC_015672.1 PFAM: Lumazine binding domain; TIGRFAM: riboflavin synthase, alpha subunit; COGs: COG0108 3 4-dihydroxy-2-butanone 4-phosphate synthase; HAMAP: GTP cyclohydrolase-2; InterPro IPR000422:IPR000926; KEGG: ddf:DEFDS_1098 riboflavin biosynthesis bifunctional protein RibBA; PFAM: DHBP synthase RibB; GTP cyclohydrolase II; SPTR: Riboflavin biosynthesis bifunctional protein RibBA; TIGRFAM: DHBP synthase RibB; GTP cyclohydrolase II; riboflavin synthase subunit alpha 1106631 10815348 Flexsi_1049 Flexistipes sinusarabici DSM 4947 riboflavin synthase subunit alpha YP_004603274.1 1105978 D 717231 CDS YP_004603275.1 336323308 10815349 1106631..1107851 1 NC_015672.1 PFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; COGs: COG0054 Riboflavin synthase beta-chain; HAMAP: 6,7-dimethyl-8-ribityllumazine synthase; InterPro IPR002180; KEGG: cni:Calni_1657 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 6,7-dimethyl-8-ribityllumazine synthase; SPTR: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; GTP cyclohydrolase-2 1107851 10815349 Flexsi_1050 Flexistipes sinusarabici DSM 4947 GTP cyclohydrolase-2 YP_004603275.1 1106631 D 717231 CDS YP_004603276.1 336323309 10815350 1107873..1108343 1 NC_015672.1 PFAM: 6,7-dimethyl-8-ribityllumazine synthase; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; COGs: COG0781 Transcription termination factor; HAMAP: N utilization substance protein B-like protein; InterPro IPR006027:IPR011605; KEGG: dap:Dacet_1327 NusB antitermination factor; PFAM: NusB/RsmB/TIM44; SPTR: N utilization substance protein B homolog; TIGRFAM: NusB antitermination factor; 6,7-dimethyl-8-ribityllumazine synthase 1108343 10815350 Flexsi_1051 Flexistipes sinusarabici DSM 4947 6,7-dimethyl-8-ribityllumazine synthase YP_004603276.1 1107873 D 717231 CDS YP_004603277.1 336323310 10815351 1108347..1108784 1 NC_015672.1 PFAM: NusB family; TIGRFAM: transcription antitermination factor NusB; KEGG: cni:Calni_1655 hypothetical protein; SPTR: Putative uncharacterized protein; NusB antitermination factor 1108784 10815351 Flexsi_1052 Flexistipes sinusarabici DSM 4947 NusB antitermination factor YP_004603277.1 1108347 D 717231 CDS YP_004603278.1 336323311 10815352 1108756..1109190 1 NC_015672.1 KEGG: ddf:DEFDS_1102 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1109190 10815352 Flexsi_1053 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603278.1 1108756 D 717231 CDS YP_004603279.1 336323312 10815353 1109174..1109455 1 NC_015672.1 COGs: COG3481 HD-superfamily hydrolase; InterPro IPR004365:IPR006674:IPR003607:IPR006675; KEGG: ddf:DEFDS_1104 HAD-superfamily hydrolase; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Nucleic acid binding, OB-fold, tRNA/helicase-type; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: HAD-superfamily hydrolase; TIGRFAM: HDIG; hypothetical protein 1109455 10815353 Flexsi_1054 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603279.1 1109174 D 717231 CDS YP_004603280.1 336323313 10815354 1109497..1110414 1 NC_015672.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG2233 Xanthine/uracil permease; InterPro IPR006043:IPR006042; KEGG: ddf:DEFDS_1105 uracil transporter; PFAM: Xanthine/uracil/vitamin C permease; SPTR: Uracil transporter; TIGRFAM: Xanthine/uracil permease; metal dependent phosphohydrolase 1110414 10815354 Flexsi_1055 Flexistipes sinusarabici DSM 4947 metal dependent phosphohydrolase YP_004603280.1 1109497 D 717231 CDS YP_004603281.1 336323314 10815355 1110469..1111701 1 NC_015672.1 PFAM: Permease family; TIGRFAM: uracil-xanthine permease; COGs: COG0035 Uracil phosphoribosyltransferase; InterPro IPR000836:IPR005765; KEGG: cni:Calni_1651 uracil phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; SPTR: Uracil phosphoribosyltransferase; TIGRFAM: Uracil phosphoribosyl transferase; uracil-xanthine permease 1111701 10815355 Flexsi_1056 Flexistipes sinusarabici DSM 4947 uracil-xanthine permease YP_004603281.1 1110469 D 717231 CDS YP_004603282.1 336323315 10815356 1111701..1112336 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: uracil phosphoribosyltransferase; COGs: COG2814 Arabinose efflux permease; InterPro IPR011701; KEGG: cni:Calni_0487 major facilitator superfamily mfs_1; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; uracil phosphoribosyltransferase 1112336 10815356 Flexsi_1057 Flexistipes sinusarabici DSM 4947 uracil phosphoribosyltransferase YP_004603282.1 1111701 D 717231 CDS YP_004603283.1 336323316 10815357 complement(1112365..1113507) 1 NC_015672.1 PFAM: Major Facilitator Superfamily; KEGG: ssm:Spirs_1067 hypothetical protein; SPTR: Putative uncharacterized protein; major facilitator superfamily protein 1113507 10815357 Flexsi_1058 Flexistipes sinusarabici DSM 4947 major facilitator superfamily protein YP_004603283.1 1112365 R 717231 CDS YP_004603284.1 336323317 10815358 complement(1113582..1113683) 1 NC_015672.1 COGs: COG0733 Na+-dependent transporter of the SNF family; InterPro IPR000175; KEGG: ssm:Spirs_1066 sodium:neurotransmitter symporter; PFAM: Sodium:neurotransmitter symporter; SPTR: Transporter; hypothetical protein 1113683 10815358 Flexsi_1059 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603284.1 1113582 R 717231 CDS YP_004603285.1 336323318 10815359 complement(1113684..1115195) 1 NC_015672.1 PFAM: Sodium:neurotransmitter symporter family; COGs: COG0111 Phosphoglycerate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140:IPR002912:IPR006236; KEGG: ddf:DEFDS_0857 D-3-phosphoglycerate dehydrogenase; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; Amino acid-binding ACT; PRIAM: Phosphoglycerate dehydrogenase; SPTR: D-3-phosphoglycerate dehydrogenase; TIGRFAM: D-3-phosphoglycerate dehydrogenase; sodium:neurotransmitter symporter 1115195 10815359 Flexsi_1060 Flexistipes sinusarabici DSM 4947 sodium:neurotransmitter symporter YP_004603285.1 1113684 R 717231 CDS YP_004603286.1 336323319 10815360 1115460..1117082 1 NC_015672.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; ACT domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; TIGRFAM: D-3-phosphoglycerate dehydrogenase; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: ddf:DEFDS_0856 hypothetical protein; PFAM: Uncharacterised protein family UPF0047; SPTR: Putative uncharacterized protein; TIGRFAM: Uncharacterised protein family UPF0047; D-3-phosphoglycerate dehydrogenase 1117082 10815360 Flexsi_1061 Flexistipes sinusarabici DSM 4947 D-3-phosphoglycerate dehydrogenase YP_004603286.1 1115460 D 717231 CDS YP_004603287.1 336323320 10815361 1117082..1117480 1 NC_015672.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG1940 Transcriptional regulator/sugar kinase; InterPro IPR000600; KEGG: dap:Dacet_2223 ROK family protein; PFAM: ROK; PRIAM: Glucokinase; SPTR: ROK family protein; hypothetical protein 1117480 10815361 Flexsi_1062 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603287.1 1117082 D 717231 CDS YP_004603288.1 336323321 10815362 complement(1117636..1118535) 1 NC_015672.1 PFAM: ROK family; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153:IPR003148:IPR006037; KEGG: gfo:GFO_1965 KefB-and KefC-like glutathione-regulated potassium-efflux system protein; PFAM: Cation/H+ exchanger; Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: KefB-and KefC-like glutathione-regulated potassium-efflux system protein; glucokinase 1118535 10815362 Flexsi_1063 Flexistipes sinusarabici DSM 4947 glucokinase YP_004603288.1 1117636 R 717231 CDS YP_004603289.1 336323322 10815363 1118846..1120819 1 NC_015672.1 PFAM: TrkA-N domain; TrkA-C domain; Sodium/hydrogen exchanger family; TIGRFAM: transporter, monovalent cation:proton antiporter-2 (CPA2) family; COGs: COG1171 Threonine dehydratase; InterPro IPR001926:IPR002912:IPR005789; KEGG: ddf:DEFDS_2182 threonine dehydratase; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; Amino acid-binding ACT; SPTR: Threonine dehydratase; TIGRFAM: Threonine dehydratase II; sodium/hydrogen exchanger 1120819 10815363 Flexsi_1064 Flexistipes sinusarabici DSM 4947 sodium/hydrogen exchanger YP_004603289.1 1118846 D 717231 CDS YP_004603290.1 336323323 10815364 1120831..1122039 1 NC_015672.1 PFAM: ACT domain; Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; threonine dehydratase 1122039 10815364 Flexsi_1065 Flexistipes sinusarabici DSM 4947 threonine dehydratase YP_004603290.1 1120831 D 717231 CDS YP_004603291.1 336323324 10815365 1122347..1123714 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG1974 SOS-response transcriptional repressors (RecA-mediated autopeptidase); InterPro IPR006199:IPR019759:IPR006200; KEGG: dap:Dacet_1375 transcriptional repressor, LexA family; PFAM: LexA DNA-binding region; Peptidase S24/S26A/S26B, conserved region; SPTR: LexA repressor; TIGRFAM: Peptidase S24, LexA repressor; transposase IS4 family protein 1123714 10815365 Flexsi_1066 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603291.1 1122347 D 717231 CDS YP_004603292.1 336323325 10815366 1124172..1124762 1 NC_015672.1 PFAM: LexA DNA binding domain; Peptidase S24-like; TIGRFAM: SOS regulatory protein LexA; KEGG: cni:Calni_0692 hypothetical protein; SPTR: Putative uncharacterized protein; SOS-response transcriptional repressor, LexA 1124762 10815366 Flexsi_1067 Flexistipes sinusarabici DSM 4947 SOS-response transcriptional repressor, LexA YP_004603292.1 1124172 D 717231 CDS YP_004603293.1 336323326 10815367 1124843..1125091 1 NC_015672.1 COGs: COG0389 Nucleotidyltransferase/DNA polymerase involved in DNA repair; HAMAP: DNA polymerase IV; InterPro IPR001126; KEGG: ddf:DEFDS_0477 DNA polymerase IV; PFAM: DNA-repair protein, UmuC-like; PRIAM: DNA-directed DNA polymerase; SPTR: DNA polymerase IV; hypothetical protein 1125091 10815367 Flexsi_1068 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603293.1 1124843 D 717231 CDS YP_004603294.1 336323327 10815368 1125088..1126293 1 NC_015672.1 PFAM: impB/mucB/samB family C-terminal; IMS family HHH motif; impB/mucB/samB family; DNA polymerase IV 1126293 10815368 Flexsi_1069 Flexistipes sinusarabici DSM 4947 DNA polymerase IV YP_004603294.1 1125088 D 717231 CDS YP_004603295.1 336323328 10815369 1126342..1126458 1 NC_015672.1 InterPro IPR001450; KEGG: ddf:DEFDS_1334 hypothetical protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; hypothetical protein 1126458 10815369 Flexsi_1070 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603295.1 1126342 D 717231 CDS YP_004603296.1 336323329 10815370 1126565..1128217 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; KEGG: ddf:DEFDS_1333 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin 1128217 10815370 Flexsi_1071 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603296.1 1126565 D 717231 CDS YP_004603297.1 336323330 10815371 1128217..1128819 1 NC_015672.1 PFAM: Nitrate reductase delta subunit; InterPro IPR006311; hypothetical protein 1128819 10815371 Flexsi_1072 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603297.1 1128217 D 717231 CDS YP_004603298.1 336323331 10815372 1128844..1129023 1 NC_015672.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; TIGRFAM: formate dehydrogenase region TAT target; Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterProIPR019546:IPR006963:IPR006656:IPR006657:IPR 006311; KEGG: ddf:DEFDS_1331 formate dehydrogenase subunit alpha; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Twin-arginine translocation pathway, signal sequence, subgroup; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Formate dehydrogenase, alpha subunit; hypothetical protein 1129023 10815372 Flexsi_1073 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603298.1 1128844 D 717231 CDS YP_004603299.1 336323332 10815373 1129034..1131817 1 NC_015672.1 PFAM: TAT (twin-arginine translocation) pathway signal sequence; Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_1330 formate dehydrogenase subunit beta; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Formate dehydrogenase, beta subunit; nitrate reductase 1131817 10815373 Flexsi_1074 Flexistipes sinusarabici DSM 4947 nitrate reductase YP_004603299.1 1129034 D 717231 CDS YP_004603300.1 336323333 10815374 1131833..1132420 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG2864 Cytochrome b subunit of formate dehydrogenase; InterPro IPR006471; KEGG: ddf:DEFDS_1329 formate dehydrogenase subunit gamma; SPTR: Formate dehydrogenase, gamma subunit; TIGRFAM: Formate dehydrogenase, gamma subunit; 4Fe-4S ferredoxin 1132420 10815374 Flexsi_1075 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603300.1 1131833 D 717231 CDS YP_004603301.1 336323334 10815375 1132675..1133577 1 NC_015672.1 PFAM: Prokaryotic cytochrome b561; TIGRFAM: formate dehydrogenase, gamma subunit; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; formate dehydrogenase subunit gamma 1133577 10815375 Flexsi_1076 Flexistipes sinusarabici DSM 4947 formate dehydrogenase subunit gamma YP_004603301.1 1132675 D 717231 CDS YP_004603302.1 336323335 10815376 complement(1134009..1135376) 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG0339 Zn-dependent oligopeptidase; InterPro IPR001567; KEGG: pmx:PERMA_0406 oligopeptidase A; PFAM: Peptidase M3A/M3B, thimet/oligopeptidase F; PRIAM: Oligopeptidase A; SPTR: Oligopeptidase A; transposase IS4 family protein 1135376 10815376 Flexsi_1077 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603302.1 1134009 R 717231 CDS YP_004603303.1 336323336 10815377 complement(1135608..1137548) 1 NC_015672.1 PFAM: Peptidase family M3; COGs: COG0643 Chemotaxis protein histidine kinase and related kinase; InterPro IPR003660:IPR003594; KEGG: swo:Swol_0353 putative CheA signal transduction histidine kinases; PFAM: HAMP linker domain; ATP-binding region, ATPase-like; SMART: HAMP linker domain; ATP-binding region, ATPase-like; SPTR: Putative CheA signal transduction histidine kinases; oligopeptidase A 1137548 10815377 Flexsi_1078 Flexistipes sinusarabici DSM 4947 oligopeptidase A YP_004603303.1 1135608 R 717231 CDS YP_004603304.1 336323337 10815378 1137645..1140167 1 NC_015672.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; KEGG: mag:amb2637 hypothetical protein; SPTR: Putative uncharacterized protein; putative CheA signal transduction histidine kinase 1140167 10815378 Flexsi_1079 Flexistipes sinusarabici DSM 4947 putative CheA signal transduction histidine kinase YP_004603304.1 1137645 D 717231 CDS YP_004603305.1 336323338 10815379 1140170..1140694 1 NC_015672.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: mag:amb2638 FOG: CheY-like receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: FOG: CheY-like receiver; hypothetical protein 1140694 10815379 Flexsi_1080 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603305.1 1140170 D 717231 CDS YP_004603306.1 336323339 10815380 1140666..1141043 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dma:DMR_28660 GGDEF domain protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; response regulator receiver protein 1141043 10815380 Flexsi_1081 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004603306.1 1140666 D 717231 CDS YP_004603307.1 336323340 10815381 1141104..1142069 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0348 Polyferredoxin; InterPro IPR001450; KEGG: dap:Dacet_0868 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; diguanylate cyclase 1142069 10815381 Flexsi_1082 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004603307.1 1141104 D 717231 CDS YP_004603308.1 336323341 10815382 complement(1142080..1143111) 1 NC_015672.1 COGs: COG0603 PP-loop superfamily ATPase; InterPro IPR018317:IPR004479; KEGG: cni:Calni_1217 ExsB protein; PFAM: Queuosine synthesis-like; SPTR: 7-cyano-7-deazaguanine synthase; TIGRFAM: Exoenzyme S synthesis protein B/queuosine synthesis; 4Fe-4S ferredoxin 1143111 10815382 Flexsi_1083 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603308.1 1142080 R 717231 CDS YP_004603309.1 336323342 10815383 1143134..1143820 1 NC_015672.1 PFAM: ExsB; TIGRFAM: queuosine biosynthesis protein QueC; COGs: COG0205 6-phosphofructokinase; HAMAP: 6-phosphofructokinase; InterPro IPR000023:IPR012828; KEGG: ddf:DEFDS_0940 6-phosphofructokinase; PFAM: Phosphofructokinase; PRIAM: 6-phosphofructokinase; SPTR: 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; exsB protein 1143820 10815383 Flexsi_1084 Flexistipes sinusarabici DSM 4947 exsB protein YP_004603309.1 1143134 D 717231 CDS YP_004603310.1 336323343 10815384 1143822..1144784 1 NC_015672.1 PFAM: Phosphofructokinase; TIGRFAM: 6-phosphofructokinase; COGs: COG2096 conserved hypothetical protein; InterPro IPR002779:IPR017858; KEGG: cni:Calni_1215 ATP/cobalamin adenosyltransferase; PFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, EutT/PduO type; SPTR: ATP/cobalamin adenosyltransferase; TIGRFAM: Adenosylcobalamin biosynthesis, ATP:cob(I)alamin adenosyltransferase, PduO-type, N-terminal; 6-phosphofructokinase 1144784 10815384 Flexsi_1085 Flexistipes sinusarabici DSM 4947 6-phosphofructokinase YP_004603310.1 1143822 D 717231 CDS YP_004603311.1 336323344 10815385 1144991..1145539 1 NC_015672.1 PFAM: Cobalamin adenosyltransferase; TIGRFAM: ATP:cob(I)alamin adenosyltransferase; COGs: COG1610 conserved hypothetical protein; InterPro IPR019004; KEGG: ddf:DEFDS_1583 hypothetical protein; SPTR: Putative uncharacterized protein; ATP/cobalamin adenosyltransferase 1145539 10815385 Flexsi_1086 Flexistipes sinusarabici DSM 4947 ATP/cobalamin adenosyltransferase YP_004603311.1 1144991 D 717231 CDS YP_004603312.1 336323345 10815386 1145514..1145966 1 NC_015672.1 PFAM: Yqey-like protein; InterPro IPR003825; KEGG: ddf:DEFDS_1584 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein; hypothetical protein 1145966 10815386 Flexsi_1087 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603312.1 1145514 D 717231 CDS YP_004603313.1 336323346 10815387 1145953..1146465 1 NC_015672.1 PFAM: Colicin V production protein; COGs: COG1193 Mismatch repair ATPase (MutS family); InterPro IPR000432:IPR002625:IPR007696; KEGG: ddf:DEFDS_1585 DNA mismatch repair protein MutS2; PFAM: Smr protein/MutS2 C-terminal; DNA mismatch repair protein MutS, C-terminal; SMART: DNA mismatch repair protein MutS, C-terminal; DNA mismatch repair protein MutS, core; Smr protein/MutS2 C-terminal; SPTR: DNA mismatch repair protein MutS2; colicin V production protein 1146465 10815387 Flexsi_1088 Flexistipes sinusarabici DSM 4947 colicin V production protein YP_004603313.1 1145953 D 717231 CDS YP_004603314.1 336323347 10815388 1146476..1148773 1 NC_015672.1 PFAM: MutS domain V; Smr domain; TIGRFAM: MutS2 family protein; COGs: COG1321 Mn-dependent transcriptional regulator protein; InterPro IPR001367; KEGG: ddf:DEFDS_1285 MntR family transcriptional regulator; PFAM: Iron dependent repressor; SMART: Iron dependent repressor; SPTR: Transcriptional regulator, MntR family; Smr protein/MutS2 1148773 10815388 Flexsi_1089 Flexistipes sinusarabici DSM 4947 Smr protein/MutS2 YP_004603314.1 1146476 D 717231 CDS YP_004603315.1 336323348 10815389 1149047..1149484 1 NC_015672.1 PFAM: Iron dependent repressor, metal binding and dimerisation domain; Iron dependent repressor, N-terminal DNA binding domain; COGs: COG1647 Esterase/lipase; KEGG: ddf:DEFDS_1284 hypothetical protein; SPTR: Putative uncharacterized protein; DtxR family iron (metal) dependent repressor 1149484 10815389 Flexsi_1090 Flexistipes sinusarabici DSM 4947 DtxR family iron (metal) dependent repressor YP_004603315.1 1149047 D 717231 CDS YP_004603316.1 336323349 10815390 1149481..1150434 1 NC_015672.1 COGs: COG0345 Pyrroline-5-carboxylate reductase; InterPro IPR004455:IPR000304; KEGG: ddf:DEFDS_1283 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase, coenzyme F420-dependent; PRIAM: Pyrroline-5-carboxylate reductase; SPTR: Pyrroline-5-carboxylate reductase; TIGRFAM: Delta 1-pyrroline-5-carboxylate reductase; hypothetical protein 1150434 10815390 Flexsi_1091 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603316.1 1149481 D 717231 CDS YP_004603317.1 336323350 10815391 1150421..1151248 1 NC_015672.1 PFAM: NADP oxidoreductase coenzyme F420-dependent; TIGRFAM: pyrroline-5-carboxylate reductase; COGs: COG1309 Transcriptional regulator; InterPro IPR001647:IPR013570; KEGG: ddf:DEFDS_1282 TetR family transcriptional regulator; PFAM: Transcriptional regulator, YsiA, C-terminal; Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; pyrroline-5-carboxylate reductase 1151248 10815391 Flexsi_1092 Flexistipes sinusarabici DSM 4947 pyrroline-5-carboxylate reductase YP_004603317.1 1150421 D 717231 CDS YP_004603318.1 336323351 10815392 1151238..1151816 1 NC_015672.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family; COGs: COG2985 permease; InterPro IPR006512:IPR006037; KEGG: cni:Calni_1187 yide/ybjl duplication; PFAM: YidE/YbjL duplication; Regulator of K+ conductance, C-terminal; SPTR: YidE/YbjL duplication; TIGRFAM: YidE/YbjL duplication; TetR family transcriptional regulator 1151816 10815392 Flexsi_1093 Flexistipes sinusarabici DSM 4947 TetR family transcriptional regulator YP_004603318.1 1151238 D 717231 CDS YP_004603319.1 336323352 10815393 1151825..1153399 1 NC_015672.1 PFAM: Predicted Permease Membrane Region; TrkA-C domain; TIGRFAM: AspT/YidE/YbjL antiporter duplication domain; KEGG: aae:aq_2066 hypothetical protein; SPTR: Putative uncharacterized protein; YidE/YbjL duplication 1153399 10815393 Flexsi_1094 Flexistipes sinusarabici DSM 4947 YidE/YbjL duplication YP_004603319.1 1151825 D 717231 CDS YP_004603320.1 336323353 10815394 1153396..1153794 1 NC_015672.1 InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 1153794 10815394 Flexsi_1095 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603320.1 1153396 D 717231 CDS YP_004603321.1 336323354 10815395 1154101..1155420 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 1155420 10815395 Flexsi_1096 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603321.1 1154101 D 717231 CDS YP_004603322.1 336323355 10815397 1156126..1156752 1 NC_015672.1 PFAM: LysE type translocator; lysine exporter protein LysE/YggA 1156752 10815397 Flexsi_1098 Flexistipes sinusarabici DSM 4947 lysine exporter protein LysE/YggA YP_004603322.1 1156126 D 717231 CDS YP_004603323.1 336323356 10815399 complement(1157190..1158140) 1 NC_015672.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); COGs: COG4175 ABC-type proline/glycine betaine transport system ATPase component; InterPro IPR003439:IPR000644:IPR003593:IPR005892; KEGG: dsa:Desal_0676 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core; PRIAM: Quaternary-amine-transporting ATPase; SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core; SPTR: Glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; magnesium and cobalt transport protein CorA 1158140 10815399 Flexsi_1099 Flexistipes sinusarabici DSM 4947 magnesium and cobalt transport protein CorA YP_004603323.1 1157190 R 717231 CDS YP_004603324.1 336323357 10815400 1158399..1159604 1 NC_015672.1 PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG4176 ABC-type proline/glycine betaine transport system permease component; InterPro IPR000515; KEGG: drt:Dret_2272 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; glycine betaine/L-proline ABC transporter ATPase 1159604 10815400 Flexsi_1100 Flexistipes sinusarabici DSM 4947 glycine betaine/L-proline ABC transporter ATPase YP_004603324.1 1158399 D 717231 CDS YP_004603325.1 336323358 10815401 1159597..1160424 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG2113 ABC-type proline/glycine betaine transport systems periplasmic components; InterPro IPR007210; KEGG: drt:Dret_2271 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; ABC transporter 1160424 10815401 Flexsi_1101 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603325.1 1159597 D 717231 CDS YP_004603326.1 336323359 10815402 1160452..1161327 1 NC_015672.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG0444 ABC-type dipeptide/oligopeptide/nickel transport system ATPase component; InterPro IPR003439:IPR013563:IPR003593:IPR010066; KEGG: dap:Dacet_1755 ABC transporter related protein; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; TIGRFAM: Oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal; glycine betaine ABC transporter periplasmic subunit 1161327 10815402 Flexsi_1102 Flexistipes sinusarabici DSM 4947 glycine betaine ABC transporter periplasmic subunit YP_004603326.1 1160452 D 717231 CDS YP_004603327.1 336323360 10815403 complement(1161471..1162427) 1 NC_015672.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain; KEGG: ddf:DEFDS_1488 hypothetical protein; SPTR: Putative uncharacterized protein; oligopeptide/dipeptide ABC transporter ATPase 1162427 10815403 Flexsi_1103 Flexistipes sinusarabici DSM 4947 oligopeptide/dipeptide ABC transporter ATPase YP_004603327.1 1161471 R 717231 CDS YP_004603328.1 336323361 10815404 1162530..1163099 1 NC_015672.1 COGs: COG0358 DNA primase; InterProIPR002694:IPR013264:IPR006171:IPR006154:IPR 006295; KEGG: ddf:DEFDS_1487 DNA primase; SPTR: DNA primase; TIGRFAM: DNA primase, DnaG; hypothetical protein 1163099 10815404 Flexsi_1104 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603328.1 1162530 D 717231 CDS YP_004603329.1 336323362 10815405 1163096..1164817 1 NC_015672.1 PFAM: Toprim domain; DNA primase catalytic core, N-terminal domain; CHC2 zinc finger; TIGRFAM: DNA primase, catalytic core; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR007127:IPR009042:IPR007627:IPR007624:IPR 007630:IPR014284:IPR012760; KEGG: ddf:DEFDS_1486 DNA-directed RNA polymerase sigma 70 factor; PFAM: RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma factor 70, region 1.1; RNA polymerase sigma-70 region 4; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor RpoD, C-terminal; RNA polymerase sigma-70; DNA primase 1164817 10815405 Flexsi_1105 Flexistipes sinusarabici DSM 4947 DNA primase YP_004603329.1 1163096 D 717231 CDS YP_004603330.1 336323363 10815406 1164824..1166626 1 NC_015672.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 factor, region 1.1; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; RNA polymerase sigma factor RpoD, C-terminal domain; COGs: COG0284 Orotidine-5'-phosphate decarboxylase; InterPro IPR001754:IPR014732; KEGG: cni:Calni_0988 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase, core; PRIAM: Orotidine-5'-phosphate decarboxylase; SPTR: Orotidine 5'-phosphate decarboxylase; TIGRFAM: Orotidine 5'-phosphate decarboxylase, subfamily 1, core; RpoD subfamily RNA polymerase sigma-70 subunit 1166626 10815406 Flexsi_1106 Flexistipes sinusarabici DSM 4947 RpoD subfamily RNA polymerase sigma-70 subunit YP_004603330.1 1164824 D 717231 CDS YP_004603331.1 336323364 10815407 1166886..1167596 1 NC_015672.1 PFAM: Orotidine 5'-phosphate decarboxylase / HUMPS family; TIGRFAM: orotidine 5'-phosphate decarboxylase, subfamily 1; COGs: COG0461 Orotate phosphoribosyltransferase; HAMAP: Orotate phosphoribosyltransferase; InterPro IPR000836:IPR006273; KEGG: cni:Calni_0989 orotate phosphoribosyltransferase; PFAM: Phosphoribosyltransferase; PRIAM: Orotate phosphoribosyltransferase; SPTR: Orotate phosphoribosyltransferase; TIGRFAM: Orotate phosphoribosyltransferase, Thermus type; orotidine 5'-phosphate decarboxylase 1167596 10815407 Flexsi_1107 Flexistipes sinusarabici DSM 4947 orotidine 5'-phosphate decarboxylase YP_004603331.1 1166886 D 717231 CDS YP_004603332.1 336323365 10815408 1167589..1168164 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: orotate phosphoribosyltransferase, Thermus family; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR001789:IPR003661:IPR003594; KEGG: ddf:DEFDS_0953 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction response regulator, receiver region; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative uncharacterized protein; orotate phosphoribosyltransferase 1168164 10815408 Flexsi_1108 Flexistipes sinusarabici DSM 4947 orotate phosphoribosyltransferase YP_004603332.1 1167589 D 717231 CDS YP_004603333.1 336323366 10815409 1168407..1169894 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: ddf:DEFDS_0949 hypothetical protein; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Putative uncharacterized protein; TIGRFAM: Diguanylate cyclase, predicted; response regulator receiver sensor signal transduction histidine kinase 1169894 10815409 Flexsi_1109 Flexistipes sinusarabici DSM 4947 response regulator receiver sensor signal transduction histidine kinase YP_004603333.1 1168407 D 717231 CDS YP_004603334.1 336323367 10815410 1169937..1171271 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0820 Fe-S-cluster redox enzyme; HAMAP: Ribosomal RNA large subunit methyltransferase RlmN; InterPro IPR004383:IPR007197; KEGG: cni:Calni_0271 23S rRNA m(2)a-2503 methyltransferase; PFAM: Radical SAM; SPTR: Ribosomal RNA large subunit methyltransferase N; TIGRFAM: Ribosomal RNA large subunit methyltransferase RlmN; diguanylate cyclase 1171271 10815410 Flexsi_1110 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004603334.1 1169937 D 717231 CDS YP_004603335.1 336323368 10815411 1171268..1172308 1 NC_015672.1 PFAM: Radical SAM superfamily; TIGRFAM: 23S rRNA m2A2503 methyltransferase; InterPro IPR000551; KEGG: cni:Calni_1033 regulatory protein MerR; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Regulatory protein MerR; ribosomal RNA large subunit methyltransferase N 1172308 10815411 Flexsi_1111 Flexistipes sinusarabici DSM 4947 ribosomal RNA large subunit methyltransferase N YP_004603335.1 1171268 D 717231 CDS YP_004603336.1 336323369 10815412 complement(1172359..1172688) 1 NC_015672.1 PFAM: MerR family regulatory protein; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: dap:Dacet_1204 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; regulatory protein MerR 1172688 10815412 Flexsi_1112 Flexistipes sinusarabici DSM 4947 regulatory protein MerR YP_004603336.1 1172359 R 717231 CDS YP_004603337.1 336323370 10815413 complement(1172681..1172956) 1 NC_015672.1 PFAM: Bacterial DNA-binding protein; TIGRFAM: integration host factor, alpha subunit; KEGG: ddf:DEFDS_1533 hypothetical protein; SPTR: Putative uncharacterized protein; histone family protein DNA-binding protein 1172956 10815413 Flexsi_1113 Flexistipes sinusarabici DSM 4947 histone family protein DNA-binding protein YP_004603337.1 1172681 R 717231 CDS YP_004603338.1 336323371 10815414 complement(1173263..1174087) 1 NC_015672.1 COGs: COG0480 Translation elongation factors (GTPase); InterProIPR000795:IPR005517:IPR000640:IPR004540:IPR 005225; KEGG: ddf:DEFDS_1534 translation elongation factor G; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFG/EF2, domain IV; Translation elongation factor EFG/EF2, C-terminal; SPTR: Elongation factor G 1; TIGRFAM: Translation elongation factor EFG/EF2; Small GTP-binding protein; hypothetical protein 1174087 10815414 Flexsi_1114 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603338.1 1173263 R 717231 CDS YP_004603339.1 336323372 10815415 complement(1174139..1176220) 1 NC_015672.1 PFAM: Elongation factor G C-terminus; Elongation factor Tu GTP binding domain; Elongation factor G, domain IV; TIGRFAM: translation elongation factor EF-G; small GTP-binding protein domain; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010201; KEGG: ddf:DEFDS_1535 membrane protease subunit HflK; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit HflK; TIGRFAM: HflK; translation elongation factor G 1176220 10815415 Flexsi_1115 Flexistipes sinusarabici DSM 4947 translation elongation factor G YP_004603339.1 1174139 R 717231 CDS YP_004603340.1 336323373 10815416 1176488..1177480 1 NC_015672.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflK protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107:IPR010200; KEGG: ddf:DEFDS_1536 membrane protease subunit HflC; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Membrane protease subunit HflC; TIGRFAM: HflC; HflK protein 1177480 10815416 Flexsi_1116 Flexistipes sinusarabici DSM 4947 HflK protein YP_004603340.1 1176488 D 717231 CDS YP_004603341.1 336323374 10815417 1177477..1178334 1 NC_015672.1 PFAM: SPFH domain / Band 7 family; TIGRFAM: HflC protein; COGs: COG0460 Homoserine dehydrogenase; InterPro IPR005106:IPR001342:IPR002912; KEGG: ddf:DEFDS_1176 homoserine dehydrogenase; PFAM: Homoserine dehydrogenase, catalytic; Aspartate/homoserine dehydrogenase, NAD-binding; Amino acid-binding ACT; SPTR: Homoserine dehydrogenase; HflC protein 1178334 10815417 Flexsi_1117 Flexistipes sinusarabici DSM 4947 HflC protein YP_004603341.1 1177477 D 717231 CDS YP_004603342.1 336323375 10815418 1178653..1179966 1 NC_015672.1 PFAM: Homoserine dehydrogenase, NAD binding domain; Homoserine dehydrogenase; ACT domain; COGs: COG3635 phosphoglycerate mutase AP superfamily; InterPro IPR019304:IPR006124:IPR013371:IPR004456; KEGG: ddf:DEFDS_1177 phosphoglycerate mutase; PFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Metalloenzyme; PRIAM: Phosphoglycerate mutase; SPTR: Phosphoglycerate mutase; TIGRFAM: Homoserine kinase, putative; Cofactor-independent phosphoglycerate mutase, archaeal; homoserine dehydrogenase 1179966 10815418 Flexsi_1118 Flexistipes sinusarabici DSM 4947 homoserine dehydrogenase YP_004603342.1 1178653 D 717231 CDS YP_004603343.1 336323376 10815419 1179985..1181151 1 NC_015672.1 PFAM: Metalloenzyme superfamily; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase; TIGRFAM: 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, archaeal form; proposed homoserine kinase; COGs: COG0527 Aspartokinase; InterPro IPR001048:IPR002912:IPR005260:IPR001341; KEGG: ddf:DEFDS_1178 aspartate kinase monofunctional class; PFAM: Aspartate/glutamate/uridylate kinase; Amino acid-binding ACT; SPTR: Aspartokinase; TIGRFAM: Aspartate kinase region; Aspartate kinase, monofunctional class; proposed homoserine kinase 1181151 10815419 Flexsi_1119 Flexistipes sinusarabici DSM 4947 proposed homoserine kinase YP_004603343.1 1179985 D 717231 CDS YP_004603344.1 336323377 10815420 1181167..1182396 1 NC_015672.1 PFAM: Amino acid kinase family; ACT domain; TIGRFAM: aspartate kinase, monofunctional class; aspartate kinase; COGs: COG0119 Isopropylmalate/homocitrate/citramalate synthase; InterPro IPR000891:IPR013709:IPR005675; KEGG: cni:Calni_0870 (R)-citramalate synthase; PFAM: 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain; Pyruvate carboxyltransferase; PRIAM: (R)-citramalate synthase; SPTR: (R)-citramalate synthase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase related; aspartate kinase 1182396 10815420 Flexsi_1120 Flexistipes sinusarabici DSM 4947 aspartate kinase YP_004603344.1 1181167 D 717231 CDS YP_004603345.1 336323378 10815421 1182386..1183972 1 NC_015672.1 PFAM: LeuA allosteric (dimerisation) domain; HMGL-like; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; COGs: COG0796 Glutamate racemase; HAMAP: Glutamate racemase; InterPro IPR004391:IPR015942; KEGG: sul:SYO3AOP1_0987 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase; PRIAM: Glutamate racemase; SPTR: Glutamate racemase; TIGRFAM: Glutamate racemase; 2-isopropylmalate synthase 1183972 10815421 Flexsi_1121 Flexistipes sinusarabici DSM 4947 2-isopropylmalate synthase YP_004603345.1 1182386 D 717231 CDS YP_004603346.1 336323379 10815422 1184079..1184849 1 NC_015672.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: glutamate racemase; InterPro IPR013509:IPR000788:IPR013344; KEGG: ddf:DEFDS_1169 ribonucleoside-diphosphate reductase alpha chain; PFAM: Ribonucleotide reductase large subunit, C-terminal; Ribonucleotide reductase large subunit, N-terminal; PRIAM: Ribonucleoside-diphosphate reductase; SPTR: Ribonucleoside-diphosphate reductase; TIGRFAM: Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; glutamate racemase 1184849 10815422 Flexsi_1122 Flexistipes sinusarabici DSM 4947 glutamate racemase YP_004603346.1 1184079 D 717231 CDS YP_004603347.1 336323380 10815423 complement(1184910..1187294) 1 NC_015672.1 PFAM: Ribonucleotide reductase, all-alpha domain; Ribonucleotide reductase, barrel domain; TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: cni:Calni_1519 hypothetical protein; SPTR: Putative uncharacterized protein; ribonucleoside-diphosphate reductase 1187294 10815423 Flexsi_1123 Flexistipes sinusarabici DSM 4947 ribonucleoside-diphosphate reductase YP_004603347.1 1184910 R 717231 CDS YP_004603348.1 336323381 10815424 complement(1187572..1188669) 1 NC_015672.1 InterPro IPR003088; KEGG: ddf:DEFDS_1171 cytochrome c family protein; PFAM: Cytochrome c, class I; SPTR: Cytochrome c family protein; hypothetical protein 1188669 10815424 Flexsi_1124 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603348.1 1187572 R 717231 CDS YP_004603349.1 336323382 10815425 complement(1188669..1189946) 1 NC_015672.1 PFAM: Cytochrome c; Bacterial Cytochrome Ubiquinol Oxidase; COGs: COG1387 Histidinol phosphatase and related hydrolase of the PHP family; InterPro IPR004013:IPR003141; KEGG: cni:Calni_1860 php domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: PHP domain protein; cytochrome c class I 1189946 10815425 Flexsi_1125 Flexistipes sinusarabici DSM 4947 cytochrome c class I YP_004603349.1 1188669 R 717231 CDS YP_004603350.1 336323383 10815426 1190356..1191018 1 NC_015672.1 PFAM: PHP domain; KEGG: ddf:DEFDS_0780 hypothetical protein; SPTR: Putative uncharacterized protein; PHP domain-containing protein 1191018 10815426 Flexsi_1126 Flexistipes sinusarabici DSM 4947 PHP domain-containing protein YP_004603350.1 1190356 D 717231 CDS YP_004603351.1 336323384 10815427 1191019..1191582 1 NC_015672.1 COGs: COG4231 Indolepyruvate ferredoxin oxidoreductase alpha and beta subunits; InterPro IPR002880:IPR011766:IPR001450:IPR017721; KEGG: ddf:DEFDS_0781 indolepyruvate ferredoxin oxidoreductase subunit alpha; PFAM: Thiamine pyrophosphate enzyme, C-terminal TPP-binding; Pyruvate flavodoxin/ferredoxin oxidoreductase, N-terminal; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Indolepyruvate ferredoxin oxidoreductase, alpha subunit; TIGRFAM: Indolepyruvate ferredoxin oxidoreductase, alpha subunit; hypothetical protein 1191582 10815427 Flexsi_1127 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603351.1 1191019 D 717231 CDS YP_004603352.1 336323385 10815428 1191589..1193355 1 NC_015672.1 PFAM: domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, alpha subunit; COGs: COG1014 Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductase gamma subunit; InterPro IPR019752; KEGG: dap:Dacet_1341 pyruvate/ketoisovalerate oxidoreductase; PFAM: Pyruvate/ketoisovalerate oxidoreductase; PRIAM: Indolepyruvate ferredoxin oxidoreductase; SPTR: Pyruvate/ketoisovalerate oxidoreductase; indolepyruvate ferredoxin oxidoreductase subunit alpha 1193355 10815428 Flexsi_1128 Flexistipes sinusarabici DSM 4947 indolepyruvate ferredoxin oxidoreductase subunit alpha YP_004603352.1 1191589 D 717231 CDS YP_004603353.1 336323386 10815429 1193382..1193951 1 NC_015672.1 PFAM: Pyruvate ferredoxin/flavodoxin oxidoreductase; TIGRFAM: indolepyruvate ferredoxin oxidoreductase, beta subunit; COGs: COG0613 metal-dependent phosphoesterase (PHP family); InterPro IPR004013:IPR003141; KEGG: dap:Dacet_1342 PHP domain protein; PFAM: PHP, C-terminal; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: PHP domain protein; Indolepyruvate ferredoxin oxidoreductase 1193951 10815429 Flexsi_1129 Flexistipes sinusarabici DSM 4947 Indolepyruvate ferredoxin oxidoreductase YP_004603353.1 1193382 D 717231 CDS YP_004603354.1 336323387 10815430 1193955..1194839 1 NC_015672.1 PFAM: PHP domain; COGs: COG0746 Molybdopterin-guanine dinucleotide biosynthesis protein A; HAMAP: Molybdopterin-guanine dinucleotide biosynthesis protein A; KEGG: ddf:DEFDS_1017 molybdopterin-guanine dinucleotide biosynthesis protein A; SPTR: Probable molybdopterin-guanine dinucleotide biosynthesis protein A; PHP domain-containing protein 1194839 10815430 Flexsi_1130 Flexistipes sinusarabici DSM 4947 PHP domain-containing protein YP_004603354.1 1193955 D 717231 CDS YP_004603355.1 336323388 10815431 1194854..1195465 1 NC_015672.1 COGs: COG1526 Uncharacterized protein required for formate dehydrogenase activity; InterPro IPR003786; KEGG: ddf:DEFDS_1018 formate dehydrogenase accessory protein FdhD; PFAM: Formate dehydrogenase, subunit FdhD; SPTR: Formate dehydrogenase accessory protein FdhD; TIGRFAM: Formate dehydrogenase, subunit FdhD; molybdopterin-guanine dinucleotide biosynthesis protein A 1195465 10815431 Flexsi_1131 Flexistipes sinusarabici DSM 4947 molybdopterin-guanine dinucleotide biosynthesis protein A YP_004603355.1 1194854 D 717231 CDS YP_004603356.1 336323389 10815432 1195425..1196201 1 NC_015672.1 PFAM: FdhD/NarQ family; TIGRFAM: formate dehydrogenase family accessory protein FdhD; COGs: COG0556 Helicase subunit of the DNA excision repair complex; HAMAP: Excinuclease ABC, B subunit; InterProIPR004807:IPR006935:IPR001650:IPR001943:IPR 014001; KEGG: dap:Dacet_0842 excinuclease ABC, B subunit; PFAM: DNA/RNA helicase, C-terminal; Restriction endonuclease, type I, R subunit/Type III, Res subunit; UvrB/UvrC protein; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: UvrABC system protein B; TIGRFAM: Excinuclease ABC, B subunit; formate dehydrogenase family accessory protein FdhD 1196201 10815432 Flexsi_1132 Flexistipes sinusarabici DSM 4947 formate dehydrogenase family accessory protein FdhD YP_004603356.1 1195425 D 717231 CDS YP_004603357.1 336323390 10815433 1196198..1198174 1 NC_015672.1 PFAM: Helicase conserved C-terminal domain; UvrB/uvrC motif; Type III restriction enzyme, res subunit; Ultra-violet resistance protein B; TIGRFAM: excinuclease ABC, B subunit; COGs: COG5009 Membrane carboxypeptidase/penicillin-binding protein; InterPro IPR001264:IPR001460:IPR011816; KEGG: ddf:DEFDS_0662 penicillin-binding protein 1A; PFAM: Glycosyl transferase, family 51; Penicillin-binding protein, transpeptidase; SPTR: Penicillin-binding protein 1A; TIGRFAM: Penicillin-binding protein 1A; UvrABC system protein B 1198174 10815433 Flexsi_1133 Flexistipes sinusarabici DSM 4947 UvrABC system protein B YP_004603357.1 1196198 D 717231 CDS YP_004603358.1 336323391 10815434 1198180..1200432 1 NC_015672.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; TIGRFAM: penicillin-binding protein, 1A family; COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterPro IPR003594; KEGG: ddf:DEFDS_0661 two-component system, NtrC family, response regulator GlnL; PFAM: ATP-binding region, ATPase-like; SMART: ATP-binding region, ATPase-like; SPTR: Two-component system, NtrC family, response regulator GlnL; penicillin-binding protein 1200432 10815434 Flexsi_1134 Flexistipes sinusarabici DSM 4947 penicillin-binding protein YP_004603358.1 1198180 D 717231 CDS YP_004603359.1 336323392 10815435 1200436..1201389 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: dap:Dacet_2326 two component, sigma54 specific, transcriptional regulator, fis family; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two component, sigma54 specific, transcriptional regulator, Fis family; histidine kinase 1201389 10815435 Flexsi_1135 Flexistipes sinusarabici DSM 4947 histidine kinase YP_004603359.1 1200436 D 717231 CDS YP_004603360.1 336323393 10815436 1201386..1202783 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; Fis family two component sigma-54 specific transcriptional regulator 1202783 10815436 Flexsi_1136 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004603360.1 1201386 D 717231 CDS YP_004603361.1 336323394 10815438 1205256..1205813 1 NC_015672.1 InterPro IPR001387:IPR013096; KEGG: ddf:DEFDS_0680 transcriptional regulator; PFAM: Helix-turn-helix type 3; Cupin 2, conserved barrel; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator; hypothetical protein 1205813 10815438 Flexsi_1137 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603361.1 1205256 D 717231 CDS YP_004603362.1 336323395 10815439 1205915..1206514 1 NC_015672.1 PFAM: Cupin domain; Helix-turn-helix; COGs: COG0663 Carbonic anhydrase/acetyltransferase isoleucine patch superfamily; InterPro IPR001451; KEGG: cni:Calni_1121 hypothetical protein; SPTR: Putative uncharacterized protein; helix-turn-helix domain-containing protein 1206514 10815439 Flexsi_1138 Flexistipes sinusarabici DSM 4947 helix-turn-helix domain-containing protein YP_004603362.1 1205915 D 717231 CDS YP_004603363.1 336323396 10815440 complement(1206543..1207067) 1 NC_015672.1 COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661; KEGG: cni:Calni_1120 integral membrane sensor signal transduction histidine kinase; PFAM: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; hypothetical protein 1207067 10815440 Flexsi_1139 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603363.1 1206543 R 717231 CDS YP_004603364.1 336323397 10815441 complement(1207072..1208109) 1 NC_015672.1 PFAM: His Kinase A (phosphoacceptor) domain; InterPro IPR001387:IPR013096; KEGG: dap:Dacet_1432 transcriptional regulator, XRE family; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Transcriptional regulator, XRE family; integral membrane sensor signal transduction histidine kinase 1208109 10815441 Flexsi_1140 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004603364.1 1207072 R 717231 CDS YP_004603365.1 336323398 10815442 1208156..1208692 1 NC_015672.1 PFAM: Cupin domain; Helix-turn-helix; COGs: COG0413 Ketopantoate hydroxymethyltransferase; HAMAP: Ketopantoate hydroxymethyltransferase; InterPro IPR003700; KEGG: ddf:DEFDS_0843 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase; PRIAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; SPTR: 3-methyl-2-oxobutanoate hydroxymethyltransferase; TIGRFAM: Ketopantoate hydroxymethyltransferase; cupin 1208692 10815442 Flexsi_1141 Flexistipes sinusarabici DSM 4947 cupin YP_004603365.1 1208156 D 717231 CDS YP_004603366.1 336323399 10815443 1209101..1209922 1 NC_015672.1 PFAM: Ketopantoate hydroxymethyltransferase; TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; COGs: COG0414 Panthothenate synthetase; HAMAP: Pantoate-beta-alanine ligase; InterPro IPR003721; KEGG: dap:Dacet_1430 pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase; SPTR: Pantothenate synthetase; TIGRFAM: Pantoate-beta-alanine ligase; 3-methyl-2-oxobutanoate hydroxymethyltransferase 1209922 10815443 Flexsi_1142 Flexistipes sinusarabici DSM 4947 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_004603366.1 1209101 D 717231 CDS YP_004603367.1 336323400 10815444 1209919..1210758 1 NC_015672.1 PFAM: Pantoate-beta-alanine ligase; TIGRFAM: pantoate--beta-alanine ligase; COGs: COG0853 Aspartate 1-decarboxylase; HAMAP: Aspartate decarboxylase; InterPro IPR003190; KEGG: cni:Calni_1116 L-aspartate 1-decarboxylase; PFAM: Aspartate decarboxylase; PRIAM: Aspartate 1-decarboxylase; SPTR: Aspartate 1-decarboxylase; TIGRFAM: Aspartate decarboxylase; pantothenate synthetase 1210758 10815444 Flexsi_1143 Flexistipes sinusarabici DSM 4947 pantothenate synthetase YP_004603367.1 1209919 D 717231 CDS YP_004603368.1 336323401 10815445 1210767..1211135 1 NC_015672.1 PFAM: Aspartate decarboxylase; TIGRFAM: L-aspartate-alpha-decarboxylase; COGs: COG1200 RecG-like helicase; InterPro IPR011545:IPR001650:IPR014001:IPR004609; KEGG: cni:Calni_0994 ATP-dependent DNA helicase RecG; PFAM: DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: ATP-dependent DNA helicase RecG; TIGRFAM: DNA helicase, ATP-dependent, RecG; aspartate 1-decarboxylase 1211135 10815445 Flexsi_1144 Flexistipes sinusarabici DSM 4947 aspartate 1-decarboxylase YP_004603368.1 1210767 D 717231 CDS YP_004603369.1 336323402 10815446 1211644..1213941 1 NC_015672.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: ATP-dependent DNA helicase RecG; KEGG: ddf:DEFDS_1216 hypothetical protein; SPTR: Putative uncharacterized protein; ATP-dependent DNA helicase RecG 1213941 10815446 Flexsi_1145 Flexistipes sinusarabici DSM 4947 ATP-dependent DNA helicase RecG YP_004603369.1 1211644 D 717231 CDS YP_004603370.1 336323403 10815447 1214162..1214707 1 NC_015672.1 COGs: COG1205 Distinct helicase family with a unique C-terminal domain including a metal-binding cysteine cluster; InterPro IPR011545:IPR001650:IPR018973:IPR014001; KEGG: dap:Dacet_1226 DEAD/DEAH box helicase domain protein; PFAM: Protein of unknown function DUF1998; DNA/RNA helicase, DEAD/DEAH box type, N-terminal; DNA/RNA helicase, C-terminal; SMART: DEAD-like helicase, N-terminal; DNA/RNA helicase, C-terminal; SPTR: DEAD/DEAH box helicase domain protein; hypothetical protein 1214707 10815447 Flexsi_1146 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603370.1 1214162 D 717231 CDS YP_004603371.1 336323404 10815448 complement(1214719..1217601) 1 NC_015672.1 PFAM: Helicase conserved C-terminal domain; Domain of unknown function (DUF1998); DEAD/DEAH box helicase; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR009042:IPR007627:IPR007624:IPR007630:IPR 014284; KEGG: ddf:DEFDS_1924 DNA-directed RNA polymerase sigma 70 factor; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; RNA polymerase sigma-70 region 3; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; hypothetical protein 1217601 10815448 Flexsi_1147 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603371.1 1214719 R 717231 CDS YP_004603372.1 336323405 10815449 complement(1217651..1218601) 1 NC_015672.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR004176:IPR003959:IPR013093:IPR019489:IPR 003593:IPR017730; KEGG: ddf:DEFDS_1925 ATP-dependent Clp protease ATP-binding subunit ClpB; PFAM: ATPase associated with various cellular activities, AAA-2; Clp, N-terminal; ATPase, AAA-type, core; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpB; TIGRFAM: Chaperonin ClpB; RpoD subfamily RNA polymerase sigma-70 subunit 1218601 10815449 Flexsi_1148 Flexistipes sinusarabici DSM 4947 RpoD subfamily RNA polymerase sigma-70 subunit YP_004603372.1 1217651 R 717231 CDS YP_004603373.1 336323406 10815450 complement(1218702..1221299) 1 NC_015672.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent chaperone ClpB; COGs: COG0789 transcriptional regulator protein; InterPro IPR000551; KEGG: ddf:DEFDS_1926 MerR family transcriptional regulator; PFAM: HTH transcriptional regulator, MerR; SMART: HTH transcriptional regulator, MerR; SPTR: Transcriptional regulator, MerR family; ATP-dependent chaperone ClpB 1221299 10815450 Flexsi_1149 Flexistipes sinusarabici DSM 4947 ATP-dependent chaperone ClpB YP_004603373.1 1218702 R 717231 CDS YP_004603374.1 336323407 10815451 complement(1221313..1221696) 1 NC_015672.1 PFAM: MerR family regulatory protein; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone protein dnaJ; InterPro IPR001623:IPR001305:IPR002939:IPR012724; KEGG: ddf:DEFDS_1927 molecular chaperone DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ 1; TIGRFAM: Chaperone DnaJ; MerR family transcriptional regulator 1221696 10815451 Flexsi_1150 Flexistipes sinusarabici DSM 4947 MerR family transcriptional regulator YP_004603374.1 1221313 R 717231 CDS YP_004603375.1 336323408 10815452 complement(1221707..1222819) 1 NC_015672.1 PFAM: DnaJ central domain (4 repeats); DnaJ domain; DnaJ C terminal region; TIGRFAM: chaperone protein DnaJ; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1928 heat shock protein Hsp20; PFAM: Heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; chaperone protein dnaJ 1222819 10815452 Flexsi_1151 Flexistipes sinusarabici DSM 4947 chaperone protein dnaJ YP_004603375.1 1221707 R 717231 CDS YP_004603376.1 336323409 10815453 complement(1222831..1223271) 1 NC_015672.1 PFAM: Hsp20/alpha crystallin family; COGs: COG0810 Periplasmic protein TonB links inner and outer membranes; InterPro IPR003538:IPR006260; KEGG: ddf:DEFDS_1460 hypothetical protein; PFAM: Gram-negative bacterial tonB protein; SPTR: Putative uncharacterized protein; TIGRFAM: TonB, C-terminal; heat shock protein Hsp20 1223271 10815453 Flexsi_1152 Flexistipes sinusarabici DSM 4947 heat shock protein Hsp20 YP_004603376.1 1222831 R 717231 CDS YP_004603377.1 336323410 10815454 1223468..1224313 1 NC_015672.1 PFAM: Gram-negative bacterial tonB protein; TIGRFAM: TonB family C-terminal domain; InterPro IPR002804; KEGG: ddf:DEFDS_1459 hypothetical protein; PFAM: Archease, tRNA m5C methyltransferase chaperone; SPTR: Putative uncharacterized protein; TonB family protein 1224313 10815454 Flexsi_1153 Flexistipes sinusarabici DSM 4947 TonB family protein YP_004603377.1 1223468 D 717231 CDS YP_004603378.1 336323411 10815455 1224313..1224714 1 NC_015672.1 PFAM: Archease protein family (DUF101/UPF0211); KEGG: ddf:DEFDS_0820 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1224714 10815455 Flexsi_1154 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603378.1 1224313 D 717231 CDS YP_004603379.1 336323412 10815456 1224728..1225234 1 NC_015672.1 KEGG: ddf:DEFDS_0821 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 1225234 10815456 Flexsi_1155 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603379.1 1224728 D 717231 CDS YP_004603380.1 336323413 10815457 complement(1225258..1225605) 1 NC_015672.1 PFAM: Class III cytochrome C family; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; multiheme C-type cytochrome 1225605 10815457 Flexsi_1156 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004603380.1 1225258 R 717231 CDS YP_004603381.1 336323414 10815458 complement(1225878..1227197) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 1227197 10815458 Flexsi_1157 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603381.1 1225878 R 717231 CDS YP_004603382.1 336323415 10815460 1228685..1230646 1 NC_015672.1 PFAM: Helicase conserved C-terminal domain; DEAD/DEAH box helicase; TIGRFAM: primosomal protein N'; COGs: COG0407 Uroporphyrinogen-III decarboxylase; HAMAP: Uroporphyrinogen decarboxylase HemE; InterPro IPR006361:IPR000257; KEGG: ddf:DEFDS_0318 uroporphyrinogen decarboxylase; PFAM: Uroporphyrinogen decarboxylase (URO-D); PRIAM: Uroporphyrinogen decarboxylase; SPTR: Uroporphyrinogen decarboxylase; TIGRFAM: Uroporphyrinogen decarboxylase HemE; primosomal protein N' 1230646 10815460 Flexsi_1159 Flexistipes sinusarabici DSM 4947 primosomal protein N' YP_004603382.1 1228685 D 717231 CDS YP_004603383.1 336323416 10815461 1230995..1232014 1 NC_015672.1 PFAM: Uroporphyrinogen decarboxylase (URO-D); TIGRFAM: uroporphyrinogen decarboxylase; methyltransferase, MtaA/CmuA family; COGs: COG0276 Protoheme ferro-lyase (ferrochelatase); HAMAP: Ferrochelatase; InterPro IPR001015; KEGG: ddf:DEFDS_0319 ferrochelatase; PFAM: Ferrochelatase; SPTR: Ferrochelatase; TIGRFAM: Ferrochelatase; uroporphyrinogen decarboxylase 1232014 10815461 Flexsi_1160 Flexistipes sinusarabici DSM 4947 uroporphyrinogen decarboxylase YP_004603383.1 1230995 D 717231 CDS YP_004603384.1 336323417 10815462 1232007..1232960 1 NC_015672.1 PFAM: Ferrochelatase; TIGRFAM: ferrochelatase; COGs: COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferase; InterPro IPR000537:IPR006371; KEGG: ddf:DEFDS_0320 4-hydroxybenzoate polyprenyltransferase; PFAM: UbiA prenyltransferase; SPTR: 4-hydroxybenzoate polyprenyltransferase; TIGRFAM: 4-hydroxybenzoate polyprenyltransferase related; ferrochelatase 1232960 10815462 Flexsi_1161 Flexistipes sinusarabici DSM 4947 ferrochelatase YP_004603384.1 1232007 D 717231 CDS YP_004603385.1 336323418 10815463 1232960..1233820 1 NC_015672.1 PFAM: UbiA prenyltransferase family; TIGRFAM: putative 4-hydroxybenzoate polyprenyltransferase; COGs: COG0163 3-polyprenyl-4-hydroxybenzoate decarboxylase; InterPro IPR003382:IPR004507; KEGG: dap:Dacet_1255 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; PFAM: Flavoprotein; SPTR: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: Phenylacrylic acid decarboxylase; 4-hydroxybenzoate polyprenyltransferase 1233820 10815463 Flexsi_1162 Flexistipes sinusarabici DSM 4947 4-hydroxybenzoate polyprenyltransferase YP_004603385.1 1232960 D 717231 CDS YP_004603386.1 336323419 10815464 1233817..1234392 1 NC_015672.1 PFAM: Flavoprotein; TIGRFAM: polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases; KEGG: ddf:DEFDS_0322 hypothetical protein; SPTR: Putative uncharacterized protein; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 1234392 10815464 Flexsi_1163 Flexistipes sinusarabici DSM 4947 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_004603386.1 1233817 D 717231 CDS YP_004603387.1 336323420 10815465 1234405..1234818 1 NC_015672.1 KEGG: ddf:DEFDS_0323 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1234818 10815465 Flexsi_1164 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603387.1 1234405 D 717231 CDS YP_004603388.1 336323421 10815466 1234828..1235265 1 NC_015672.1 KEGG: ddf:DEFDS_0325 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1235265 10815466 Flexsi_1165 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603388.1 1234828 D 717231 CDS YP_004603389.1 336323422 10815467 1235302..1235754 1 NC_015672.1 KEGG: cni:Calni_0442 cytochrome c family protein; SPTR: Cytochrome c family protein; hypothetical protein 1235754 10815467 Flexsi_1166 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603389.1 1235302 D 717231 CDS YP_004603390.1 336323423 10815468 complement(1235773..1236117) 1 NC_015672.1 COGs: COG4121 conserved hypothetical protein; InterPro IPR008471; KEGG: ddf:DEFDS_0197 hypothetical protein; PFAM: Protein of unknown function DUF752; SPTR: Putative uncharacterized protein; cytochrome c family protein 1236117 10815468 Flexsi_1167 Flexistipes sinusarabici DSM 4947 cytochrome c family protein YP_004603390.1 1235773 R 717231 CDS YP_004603391.1 336323424 10815469 complement(1236311..1237006) 1 NC_015672.1 PFAM: Protein of unknown function (DUF752); COGs: COG0029 Aspartate oxidase; InterPro IPR003953:IPR004112:IPR005288; KEGG: cni:Calni_1125 L-aspartate oxidase; PFAM: Fumarate reductase/succinate dehydrogenase flavoprotein, N-terminal; Fumarate reductase/succinate dehydrogenase flavoprotein, C-terminal; PRIAM: L-aspartate oxidase; SPTR: L-aspartate oxidase; TIGRFAM: L-aspartate oxidase; hypothetical protein 1237006 10815469 Flexsi_1168 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603391.1 1236311 R 717231 CDS YP_004603392.1 336323425 10815470 complement(1236978..1238540) 1 NC_015672.1 PFAM: domain; FAD binding domain; TIGRFAM: L-aspartate oxidase; KEGG: ddf:DEFDS_0199 hypothetical protein; SPTR: Putative uncharacterized protein; L-aspartate oxidase 1238540 10815470 Flexsi_1169 Flexistipes sinusarabici DSM 4947 L-aspartate oxidase YP_004603392.1 1236978 R 717231 CDS YP_004603393.1 336323426 10815471 complement(1238541..1239266) 1 NC_015672.1 InterPro IPR007197; KEGG: dap:Dacet_0745 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; hypothetical protein 1239266 10815471 Flexsi_1170 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603393.1 1238541 R 717231 CDS YP_004603394.1 336323427 10815472 complement(1239266..1240447) 1 NC_015672.1 COGs: COG0148 Enolase; HAMAP: Enolase; InterPro IPR000941:IPR020811:IPR020810; KEGG: ddf:DEFDS_0201 enolase; PFAM: Enolase, C-terminal; Enolase, N-terminal; PRIAM: Phosphopyruvate hydratase; SPTR: Enolase; TIGRFAM: Enolase; radical SAM protein 1240447 10815472 Flexsi_1171 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004603394.1 1239266 R 717231 CDS YP_004603395.1 336323428 10815473 1240811..1242100 1 NC_015672.1 PFAM: Enolase, N-terminal domain; Enolase, C-terminal TIM barrel domain; TIGRFAM: phosphopyruvate hydratase; COGs: COG2309 Leucyl aminopeptidase (aminopeptidase T); InterPro IPR000787; KEGG: ddf:DEFDS_1140 peptidase M29, aminopeptidase II; PFAM: Peptidase M29, aminopeptidase II; SPTR: Peptidase M29, aminopeptidase II; enolase 1242100 10815473 Flexsi_1172 Flexistipes sinusarabici DSM 4947 enolase YP_004603395.1 1240811 D 717231 CDS YP_004603396.1 336323429 10815474 1242191..1243294 1 NC_015672.1 PFAM: Thermophilic metalloprotease (M29); COGs: COG1295 membrane protein; InterPro IPR004664; KEGG: cni:Calni_0866 ribonuclease bn; PFAM: Ribonuclease BN-related; SPTR: Ribonuclease BN; peptidase M29 aminopeptidase II 1243294 10815474 Flexsi_1173 Flexistipes sinusarabici DSM 4947 peptidase M29 aminopeptidase II YP_004603396.1 1242191 D 717231 CDS YP_004603397.1 336323430 10815475 1243384..1244580 1 NC_015672.1 PFAM: Ribonuclease BN-like family; TIGRFAM: YihY family protein (not ribonuclease BN); COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; InterPro IPR010395; KEGG: ddf:DEFDS_1625 cytoplasmic chaperone TorD; SPTR: Cytoplasmic chaperone TorD; ribonuclease BN 1244580 10815475 Flexsi_1174 Flexistipes sinusarabici DSM 4947 ribonuclease BN YP_004603397.1 1243384 D 717231 CDS YP_004603398.1 336323431 10815476 1244715..1245437 1 NC_015672.1 PFAM: Nitrate reductase delta subunit; KEGG: ddf:DEFDS_1624 cytochrome c family protein; SPTR: Cytochrome c family protein; cytoplasmic chaperone TorD 1245437 10815476 Flexsi_1175 Flexistipes sinusarabici DSM 4947 cytoplasmic chaperone TorD YP_004603398.1 1244715 D 717231 CDS YP_004603399.1 336323432 10815477 1245511..1245864 1 NC_015672.1 KEGG: ddf:DEFDS_1623 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome c family protein 1245864 10815477 Flexsi_1176 Flexistipes sinusarabici DSM 4947 cytochrome c family protein YP_004603399.1 1245511 D 717231 CDS YP_004603400.1 336323433 10815478 1246015..1247832 1 NC_015672.1 PFAM: Protein of unknown function (DUF3373); COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cni:Calni_0613 transcriptional regulator, badm/rrf2 family; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; hypothetical protein 1247832 10815478 Flexsi_1177 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603400.1 1246015 D 717231 CDS YP_004603401.1 336323434 10815479 complement(1247937..1248341) 1 NC_015672.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; InterPro IPR002123; KEGG: dvl:Dvul_1399 phospholipid/glycerol acyltransferase; PFAM: Phospholipid/glycerol acyltransferase; SMART: Phospholipid/glycerol acyltransferase; SPTR: Phospholipid/glycerol acyltransferase; BadM/Rrf2 family transcriptional regulator 1248341 10815479 Flexsi_1178 Flexistipes sinusarabici DSM 4947 BadM/Rrf2 family transcriptional regulator YP_004603401.1 1247937 R 717231 CDS YP_004603402.1 336323435 10815480 complement(1248424..1249212) 1 NC_015672.1 PFAM: Acyltransferase; TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferases; phospholipid/glycerol acyltransferase 1249212 10815480 Flexsi_1179 Flexistipes sinusarabici DSM 4947 phospholipid/glycerol acyltransferase YP_004603402.1 1248424 R 717231 CDS YP_004603403.1 336323436 10815482 1249621..1250748 1 NC_015672.1 PFAM: Aminotransferase class I and II; InterPro IPR002145; PFAM: CopG-like DNA-binding; aspartate transaminase 1250748 10815482 Flexsi_1180 Flexistipes sinusarabici DSM 4947 aspartate transaminase YP_004603403.1 1249621 D 717231 CDS YP_004603404.1 336323437 10815483 1250975..1251199 1 NC_015672.1 PFAM: Ribbon-helix-helix protein, copG family; COGs: COG2206 HD-GYP domain; InterPro IPR001789:IPR006674:IPR003607:IPR006675; KEGG: ddf:DEFDS_1712 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; Signal transduction response regulator, receiver region; SMART: Metal-dependent phosphohydrolase, HD region; Signal transduction response regulator, receiver region; SPTR: Putative uncharacterized protein; TIGRFAM: HDIG; CopG family transcriptional regulator 1251199 10815483 Flexsi_1181 Flexistipes sinusarabici DSM 4947 CopG family transcriptional regulator YP_004603404.1 1250975 D 717231 CDS YP_004603405.1 336323438 10815484 1251196..1252608 1 NC_015672.1 PFAM: HD domain; Response regulator receiver domain; TIGRFAM: uncharacterized domain HDIG; response regulator receiver modulated metal dependent phosphohydrolase 1252608 10815484 Flexsi_1182 Flexistipes sinusarabici DSM 4947 response regulator receiver modulated metal dependent phosphohydrolase YP_004603405.1 1251196 D 717231 CDS YP_004603406.1 336323439 10815487 1253621..1254640 1 NC_015672.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: aspartate-semialdehyde dehydrogenase (peptidoglycan organisms); COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509:IPR011912; KEGG: ddf:DEFDS_0970 ADP-glyceromanno-heptose 6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: ADP-glyceromanno-heptose 6-epimerase; SPTR: ADP-glyceromanno-heptose 6-epimerase; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; aspartate-semialdehyde dehydrogenase 1254640 10815487 Flexsi_1183 Flexistipes sinusarabici DSM 4947 aspartate-semialdehyde dehydrogenase YP_004603406.1 1253621 D 717231 CDS YP_004603407.1 336323440 10815488 1254764..1255729 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; COGs: COG1586 S-adenosylmethionine decarboxylase; HAMAP: S-adenosylmethionine decarboxylase proenzyme; InterPro IPR003826:IPR017716; KEGG: ddf:DEFDS_0969 adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase, bacterial/archaeal; PRIAM: Adenosylmethionine decarboxylase; SPTR: S-adenosylmethionine decarboxylase proenzyme; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; ADP-L-glycero-D-manno-heptose-6-epimerase 1255729 10815488 Flexsi_1184 Flexistipes sinusarabici DSM 4947 ADP-L-glycero-D-manno-heptose-6-epimerase YP_004603407.1 1254764 D 717231 CDS YP_004603408.1 336323441 10815489 1255924..1256313 1 NC_015672.1 PFAM: S-adenosylmethionine decarboxylase; TIGRFAM: S-adenosylmethionine decarboxylase proenzyme, Bacillus form; COGs: COG1945 conserved hypothetical protein; HAMAP: Pyruvoyl-dependent arginine decarboxylase; InterPro IPR002724; KEGG: mvu:Metvu_0499 pyruvoyl-dependent arginine decarboxylase; PFAM: Pyruvoyl-dependent arginine decarboxylase; PRIAM: Arginine decarboxylase; SPTR: Pyruvoyl-dependent arginine decarboxylase; TIGRFAM: Pyruvoyl-dependent arginine decarboxylase; S-adenosylmethionine decarboxylase 1256313 10815489 Flexsi_1185 Flexistipes sinusarabici DSM 4947 S-adenosylmethionine decarboxylase YP_004603408.1 1255924 D 717231 CDS YP_004603409.1 336323442 10815490 1256329..1256796 1 NC_015672.1 PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; COGs: COG0421 Spermidine synthase; HAMAP: Spermidine synthase; InterPro IPR001045; KEGG: ddf:DEFDS_0968 spermidine synthase; PFAM: Spermine synthase; SPTR: Spermidine synthase; TIGRFAM: Spermine synthase; pyruvoyl-dependent arginine decarboxylase 1256796 10815490 Flexsi_1186 Flexistipes sinusarabici DSM 4947 pyruvoyl-dependent arginine decarboxylase YP_004603409.1 1256329 D 717231 CDS YP_004603410.1 336323443 10815491 1256865..1257710 1 NC_015672.1 PFAM: Spermine/spermidine synthase; TIGRFAM: spermidine synthase; COGs: COG0010 Arginase/agmatinase/formimionoglutamate hydrolase arginase family; InterPro IPR006035:IPR005925; KEGG: ddf:DEFDS_0967 agmatinase; PFAM: Ureohydrolase; PRIAM: Agmatinase; SPTR: Agmatinase; TIGRFAM: Putative agmatinase; spermidine synthase 1257710 10815491 Flexsi_1187 Flexistipes sinusarabici DSM 4947 spermidine synthase YP_004603410.1 1256865 D 717231 CDS YP_004603411.1 336323444 10815492 1257694..1258530 1 NC_015672.1 PFAM: Arginase family; TIGRFAM: agmatinase; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: cni:Calni_1071 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; agmatinase 1258530 10815492 Flexsi_1188 Flexistipes sinusarabici DSM 4947 agmatinase YP_004603411.1 1257694 D 717231 CDS YP_004603412.1 336323445 10815493 1258755..1259027 1 NC_015672.1 PFAM: Bacterial DNA-binding protein; InterPro IPR001387:IPR013096; KEGG: cni:Calni_1070 helix-turn-helix domain protein; PFAM: Cupin 2, conserved barrel; Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Helix-turn-helix domain protein; histone family protein DNA-binding protein 1259027 10815493 Flexsi_1189 Flexistipes sinusarabici DSM 4947 histone family protein DNA-binding protein YP_004603412.1 1258755 D 717231 CDS YP_004603413.1 336323446 10815494 1259133..1259690 1 NC_015672.1 PFAM: Cupin domain; Helix-turn-helix; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ddf:DEFDS_0964 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate-CoA ligase; cupin 1259690 10815494 Flexsi_1190 Flexistipes sinusarabici DSM 4947 cupin YP_004603413.1 1259133 D 717231 CDS YP_004603414.1 336323447 10815495 1260055..1261353 1 NC_015672.1 PFAM: AMP-binding enzyme; TIGRFAM: phenylacetate-CoA ligase; COGs: COG4747 ACT domain-containing protein; InterPro IPR002912; KEGG: ddf:DEFDS_0963 hypothetical protein; PFAM: Amino acid-binding ACT; SPTR: Putative uncharacterized protein; phenylacetate--CoA ligase 1261353 10815495 Flexsi_1191 Flexistipes sinusarabici DSM 4947 phenylacetate--CoA ligase YP_004603414.1 1260055 D 717231 CDS YP_004603415.1 336323448 10815496 1261370..1261801 1 NC_015672.1 PFAM: ACT domain; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_0962 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; amino acid-binding ACT domain-containing protein 1261801 10815496 Flexsi_1192 Flexistipes sinusarabici DSM 4947 amino acid-binding ACT domain-containing protein YP_004603415.1 1261370 D 717231 CDS YP_004603416.1 336323449 10815497 1261819..1262943 1 NC_015672.1 PFAM: Receptor family ligand binding region; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_0962 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; extracellular ligand-binding receptor 1262943 10815497 Flexsi_1193 Flexistipes sinusarabici DSM 4947 extracellular ligand-binding receptor YP_004603416.1 1261819 D 717231 CDS YP_004603417.1 336323450 10815498 1263089..1264210 1 NC_015672.1 PFAM: Receptor family ligand binding region; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cni:Calni_0893 amino acid/amide abc transporter membrane protein 1, haat family; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid/amide ABC transporter membrane protein 1, HAAT family; extracellular ligand-binding receptor 1264210 10815498 Flexsi_1194 Flexistipes sinusarabici DSM 4947 extracellular ligand-binding receptor YP_004603417.1 1263089 D 717231 CDS YP_004603418.1 336323451 10815499 1264211..1265074 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: cni:Calni_0894 amino acid/amide abc transporter membrane protein 2, haat family; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid/amide ABC transporter membrane protein 2, HAAT family; ABC transporter 1265074 10815499 Flexsi_1195 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603418.1 1264211 D 717231 CDS YP_004603419.1 336323452 10815500 1265071..1266012 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0895 amino acid/amide abc transporter ATP-binding protein 1, haat family; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; ABC transporter 1266012 10815500 Flexsi_1196 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603419.1 1265071 D 717231 CDS YP_004603420.1 336323453 10815501 1265999..1266751 1 NC_015672.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0896 amino acid/amide abc transporter ATP-binding protein 2, haat family; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; monosaccharide-transporting ATPase 1266751 10815501 Flexsi_1197 Flexistipes sinusarabici DSM 4947 monosaccharide-transporting ATPase YP_004603420.1 1265999 D 717231 CDS YP_004603421.1 336323454 10815502 1266744..1267469 1 NC_015672.1 PFAM: ABC transporter; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: ddf:DEFDS_0957 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Phenylacetate--CoA ligase; SPTR: Phenylacetate-CoA ligase; phosphonate-transporting ATPase 1267469 10815502 Flexsi_1198 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004603421.1 1266744 D 717231 CDS YP_004603422.1 336323455 10815503 1267474..1268775 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG1896 hydrolase of HD superfamily; InterPro IPR006674; KEGG: ddf:DEFDS_0956 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SPTR: Putative uncharacterized protein; phenylacetate--CoA ligase 1268775 10815503 Flexsi_1199 Flexistipes sinusarabici DSM 4947 phenylacetate--CoA ligase YP_004603422.1 1267474 D 717231 CDS YP_004603423.1 336323456 10815504 1268768..1269361 1 NC_015672.1 KEGG: cni:Calni_0899 hypothetical protein; SPTR: Putative uncharacterized protein; metal dependent phosphohydrolase 1269361 10815504 Flexsi_1200 Flexistipes sinusarabici DSM 4947 metal dependent phosphohydrolase YP_004603423.1 1268768 D 717231 CDS YP_004603424.1 336323457 10815505 1269330..1269869 1 NC_015672.1 COGs: COG1283 Na+/phosphate symporter; InterPro IPR003841:IPR008170:IPR004633; KEGG: ddf:DEFDS_0081 Na:phosphate symporter; PFAM: Na/Pi-cotransporter; PhoU; SPTR: Na:phosphate symporter; TIGRFAM: Na/Pi co-transporter II-related; hypothetical protein 1269869 10815505 Flexsi_1201 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603424.1 1269330 D 717231 CDS YP_004603425.1 336323458 10815506 1270352..1272004 1 NC_015672.1 PFAM: PhoU domain; Na+/Pi-cotransporter; TIGRFAM: Na/Pi-cotransporter; COGs: COG0248 Exopolyphosphatase; InterPro IPR003695; KEGG: ddf:DEFDS_1930 phosphatase Ppx/GppA family; PFAM: Ppx/GppA phosphatase; SPTR: Phosphatase, Ppx/GppA family; Na/Pi-cotransporter II-like protein 1272004 10815506 Flexsi_1202 Flexistipes sinusarabici DSM 4947 Na/Pi-cotransporter II-like protein YP_004603425.1 1270352 D 717231 CDS YP_004603426.1 336323459 10815507 1272004..1272915 1 NC_015672.1 PFAM: Ppx/GppA phosphatase family; COGs: COG4399 conserved hypothetical protein; InterPro IPR007383; KEGG: ddf:DEFDS_1931 hypothetical protein; PFAM: Protein of unknown function DUF445, transmembrane; SPTR: Putative uncharacterized protein; Ppx/GppA phosphatase 1272915 10815507 Flexsi_1203 Flexistipes sinusarabici DSM 4947 Ppx/GppA phosphatase YP_004603426.1 1272004 D 717231 CDS YP_004603427.1 336323460 10815508 1272896..1274425 1 NC_015672.1 PFAM: Protein of unknown function (DUF445); COGs: COG1994 Zn-dependent protease; InterPro IPR008915; KEGG: ddf:DEFDS_1002 peptidase M50 family; PFAM: Peptidase M50; SPTR: Peptidase, M50 family; hypothetical protein 1274425 10815508 Flexsi_1204 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603427.1 1272896 D 717231 CDS YP_004603428.1 336323461 10815509 1274650..1275285 1 NC_015672.1 PFAM: Peptidase family M50; COGs: COG0180 Tryptophanyl-tRNA synthetase; InterPro IPR002305:IPR002306; KEGG: ddf:DEFDS_1003 tryptophanyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; PRIAM: Tryptophan--tRNA ligase; SPTR: Tryptophanyl-tRNA synthetase; TIGRFAM: Tryptophanyl-tRNA synthetase, class Ib; peptidase M50 1275285 10815509 Flexsi_1205 Flexistipes sinusarabici DSM 4947 peptidase M50 YP_004603428.1 1274650 D 717231 CDS YP_004603429.1 336323462 10815510 1275300..1276280 1 NC_015672.1 PFAM: tRNA synthetases class I (W and Y); TIGRFAM: tryptophanyl-tRNA synthetase; COGs: COG1354 conserved hypothetical protein; HAMAP: Segregation and condensation protein A; InterPro IPR003768; KEGG: dap:Dacet_1364 chromosome segregation and condensation protein ScpA; PFAM: Prokaryotic chromosome segregation/condensation protein ScpA; SPTR: Chromosome segregation and condensation protein ScpA; tryptophanyl-tRNA synthetase 1276280 10815510 Flexsi_1206 Flexistipes sinusarabici DSM 4947 tryptophanyl-tRNA synthetase YP_004603429.1 1275300 D 717231 CDS YP_004603430.1 336323463 10815511 1276277..1276984 1 NC_015672.1 PFAM: ScpA/B protein; COGs: COG1386 transcriptional regulator protein containing the HTH domain; InterPro IPR005234; KEGG: dap:Dacet_1365 chromosome segregation and condensation protein, ScpB; PFAM: Chromosome segregation/condensation protein ScpB, prokaryote; SPTR: Chromosome segregation and condensation protein, ScpB; TIGRFAM: Chromosome segregation/condensation protein ScpB, prokaryote; segregation and condensation protein A 1276984 10815511 Flexsi_1207 Flexistipes sinusarabici DSM 4947 segregation and condensation protein A YP_004603430.1 1276277 D 717231 CDS YP_004603431.1 336323464 10815512 1276974..1277492 1 NC_015672.1 PFAM: Putative transcriptional regulators (Ypuh-like); TIGRFAM: segregation and condensation protein B; COGs: COG1187 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthase; InterPro IPR002942:IPR006145:IPR000748; KEGG: dap:Dacet_1366 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; RNA-binding S4; SMART: RNA-binding S4; SPTR: Pseudouridine synthase; TIGRFAM: Pseudouridine synthase, RsuA and RluB/E/F; chromosome segregation and condensation protein ScpB 1277492 10815512 Flexsi_1208 Flexistipes sinusarabici DSM 4947 chromosome segregation and condensation protein ScpB YP_004603431.1 1276974 D 717231 CDS YP_004603432.1 336323465 10815513 1277468..1278190 1 NC_015672.1 PFAM: RNA pseudouridylate synthase; S4 domain; TIGRFAM: pseudouridine synthase; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: ddf:DEFDS_1007 6-pyruvoyl-tetrahydropterin synthase; PFAM: 6-pyruvoyl tetrahydropterin synthase-related; SPTR: 6-pyruvoyl-tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; pseudouridine synthase Rsu 1278190 10815513 Flexsi_1209 Flexistipes sinusarabici DSM 4947 pseudouridine synthase Rsu YP_004603432.1 1277468 D 717231 CDS YP_004603433.1 336323466 10815514 1278183..1278542 1 NC_015672.1 PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0602 Organic radical activating protein; InterPro IPR007197; KEGG: ddf:DEFDS_1008 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; queuosine biosynthesis protein QueD 1278542 10815514 Flexsi_1210 Flexistipes sinusarabici DSM 4947 queuosine biosynthesis protein QueD YP_004603433.1 1278183 D 717231 CDS YP_004603434.1 336323467 10815515 1278535..1279242 1 NC_015672.1 PFAM: Radical SAM superfamily; InterPro IPR013105:IPR001440:IPR019734; KEGG: ddf:DEFDS_1009 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; radical SAM protein 1279242 10815515 Flexsi_1211 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004603434.1 1278535 D 717231 CDS YP_004603435.1 336323468 10815516 1279239..1281608 1 NC_015672.1 COGs: COG3267 Type II secretory pathway component ExeA (predicted ATPase); InterPro IPR011579:IPR003593; KEGG: ddf:DEFDS_1010 general secretion pathway protein A; SMART: ATPase, AAA+ type, core; SPTR: General secretion pathway protein A; hypothetical protein 1281608 10815516 Flexsi_1212 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603435.1 1279239 D 717231 CDS YP_004603436.1 336323469 10815517 1281640..1282458 1 NC_015672.1 PFAM: Archaeal ATPase; COGs: COG5000 Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation; InterPro IPR003660:IPR003661:IPR003594; KEGG: dap:Dacet_1368 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; AAA ATPase 1282458 10815517 Flexsi_1213 Flexistipes sinusarabici DSM 4947 AAA ATPase YP_004603436.1 1281640 D 717231 CDS YP_004603437.1 336323470 10815518 1282503..1284668 1 NC_015672.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_1012 two-component, sigma54 specific, transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component, sigma54 specific, transcriptional regulator; integral membrane sensor signal transduction histidine kinase 1284668 10815518 Flexsi_1214 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004603437.1 1282503 D 717231 CDS YP_004603438.1 336323471 10815519 1284649..1286031 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135:IPR005720; KEGG: cni:Calni_1008 dihydroorotate oxidase B, catalytic subunit; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; PRIAM: Dihydroorotate oxidase; SPTR: Dihydroorotate dehydrogenase; TIGRFAM: Dihydroorotate dehydrogenase, class 1, core; Fis family two component sigma-54 specific transcriptional regulator 1286031 10815519 Flexsi_1215 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004603438.1 1284649 D 717231 CDS YP_004603439.1 336323472 10815520 complement(1286221..1287135) 1 NC_015672.1 PFAM: Dihydroorotate dehydrogenase; TIGRFAM: dihydroorotate dehydrogenase (subfamily 1) family protein; COGs: COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductase; InterPro IPR001433:IPR019480; KEGG: ddf:DEFDS_1218 dihydroorotate dehydrogenase electron transfer subunit; PFAM: Oxidoreductase FAD/NAD(P)-binding; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; SPTR: Dihydroorotate dehydrogenase electron transfer subunit; dihydroorotate dehydrogenase family protein 1287135 10815520 Flexsi_1216 Flexistipes sinusarabici DSM 4947 dihydroorotate dehydrogenase family protein YP_004603439.1 1286221 R 717231 CDS YP_004603440.1 336323473 10815521 complement(1287132..1287932) 1 NC_015672.1 PFAM: Iron-sulfur cluster binding domain of dihydroorotate dehydrogenase B; Oxidoreductase NAD-binding domain; COGs: COG0458 Carbamoylphosphate synthase large subunit (split gene in MJ); InterProIPR005481:IPR005479:IPR005480:IPR011607:IPR 012607:IPR006275; KEGG: ddf:DEFDS_1217 carbamoylphosphate synthase large subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Carbamoyl phosphate synthetase, large subunit, oligomerisation; MGS-like; Ribosomal protein S22; PRIAM: Carbamoyl-phosphate synthase (ammonia); SPTR: Carbamoyl-phosphate synthase large chain; TIGRFAM: Carbamoyl phosphate synthase, large subunit, glutamine-dependent; oxidoreductase FAD/NAD(P)-binding domain-containing protein 1287932 10815521 Flexsi_1217 Flexistipes sinusarabici DSM 4947 oxidoreductase FAD/NAD(P)-binding domain-containing protein YP_004603440.1 1287132 R 717231 CDS YP_004603441.1 336323474 10815522 complement(1287949..1291185) 1 NC_015672.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; MGS-like domain; Carbamoyl-phosphate synthetase large chain, oligomerisation domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: carbamoyl-phosphate synthase, large subunit; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594:IPR000014; KEGG: cni:Calni_1645 signal transduction histidine kinase, nitrogen specific, NtrB; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; SPTR: Signal transduction histidine kinase, nitrogen specific, NtrB; carbamoyl-phosphate synthase large subunit 1291185 10815522 Flexsi_1218 Flexistipes sinusarabici DSM 4947 carbamoyl-phosphate synthase large subunit YP_004603441.1 1287949 R 717231 CDS YP_004603442.1 336323475 10815523 complement(1291313..1292977) 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG1459 Type II secretory pathway component PulF; InterPro IPR018076; KEGG: ddf:DEFDS_1111 type IV pilus assembly protein PilC; PFAM: Type II secretion system F domain; SPTR: Type IV pilus assembly protein PilC; multi-sensor signal transduction histidine kinase 1292977 10815523 Flexsi_1219 Flexistipes sinusarabici DSM 4947 multi-sensor signal transduction histidine kinase YP_004603442.1 1291313 R 717231 CDS YP_004603443.1 336323476 10815524 complement(1293029..1294240) 1 NC_015672.1 PFAM: Bacterial type II secretion system protein F domain; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR001482:IPR006321; KEGG: ddf:DEFDS_1110 twitching motility protein PilT; PFAM: Type II secretion system protein E; SPTR: Twitching motility protein PilT; TIGRFAM: Pilus retraction protein PilT; type II secretion system F domain-containing protein 1294240 10815524 Flexsi_1220 Flexistipes sinusarabici DSM 4947 type II secretion system F domain-containing protein YP_004603443.1 1293029 R 717231 CDS YP_004603444.1 336323477 10815525 complement(1294320..1295417) 1 NC_015672.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; COGs: COG2804 Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; InterPro IPR007831:IPR001482:IPR003593:IPR013374; KEGG: ddf:DEFDS_1109 type IV pilus assembly protein PilB; PFAM: Type II secretion system protein E; General secretory system II, protein E, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Type IV pilus assembly protein PilB; TIGRFAM: ATPase, type IV, pilus assembly, PilB; twitching motility protein 1295417 10815525 Flexsi_1221 Flexistipes sinusarabici DSM 4947 twitching motility protein YP_004603444.1 1294320 R 717231 CDS YP_004603445.1 336323478 10815526 complement(1295510..1297207) 1 NC_015672.1 PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain; TIGRFAM: type IV-A pilus assembly ATPase PilB; general secretory pathway protein E; COGs: COG0169 Shikimate 5-dehydrogenase; HAMAP: Shikimate dehydrogenase; InterPro IPR013708:IPR006151:IPR011342; KEGG: ddf:DEFDS_1108 shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; SPTR: Shikimate 5-dehydrogenase; TIGRFAM: Quinate/shikimate 5-dehydrogenase; type IV-A pilus assembly ATPase PilB 1297207 10815526 Flexsi_1222 Flexistipes sinusarabici DSM 4947 type IV-A pilus assembly ATPase PilB YP_004603445.1 1295510 R 717231 CDS YP_004603446.1 336323479 10815527 complement(1297209..1298048) 1 NC_015672.1 PFAM: Shikimate dehydrogenase substrate binding domain; Shikimate / quinate 5-dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; COGs: COG2928 conserved hypothetical protein; InterPro IPR007462; KEGG: ddf:DEFDS_1107 hypothetical protein; PFAM: Protein of unknown function DUF502; SPTR: Putative uncharacterized protein; shikimate dehydrogenase 1298048 10815527 Flexsi_1223 Flexistipes sinusarabici DSM 4947 shikimate dehydrogenase YP_004603446.1 1297209 R 717231 CDS YP_004603447.1 336323480 10815528 complement(1298075..1298722) 1 NC_015672.1 PFAM: Protein of unknown function (DUF502); COGs: COG1584 membrane protein; InterPro IPR000791; KEGG: ddf:DEFDS_0518 hypothetical protein; PFAM: GPR1/FUN34/yaaH; SPTR: Putative uncharacterized protein; hypothetical protein 1298722 10815528 Flexsi_1224 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603447.1 1298075 R 717231 CDS YP_004603448.1 336323481 10815529 complement(1298859..1299518) 1 NC_015672.1 PFAM: GPR1/FUN34/yaaH family; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR001450:IPR002932; KEGG: ddf:DEFDS_1016 hypothetical protein; PFAM: Glutamate synthase, central-C; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Glutamate synthase (NADPH); SPTR: Putative uncharacterized protein; GPR1/FUN34/yaaH family protein 1299518 10815529 Flexsi_1225 Flexistipes sinusarabici DSM 4947 GPR1/FUN34/yaaH family protein YP_004603448.1 1298859 R 717231 CDS YP_004603449.1 336323482 10815530 complement(1300162..1302894) 1 NC_015672.1 PFAM: Conserved region in glutamate synthase; KEGG: ddf:DEFDS_1015 hypothetical protein; SPTR: Putative uncharacterized protein; glutamate synthase 1302894 10815530 Flexsi_1226 Flexistipes sinusarabici DSM 4947 glutamate synthase YP_004603449.1 1300162 R 717231 CDS YP_004603450.1 336323483 10815531 complement(1302881..1304092) 1 NC_015672.1 PFAM: Glutamine amidotransferases class-II; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR013027; KEGG: dap:Dacet_0101 glucose-inhibited division protein A; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PRIAM: Glutamate synthase (NADPH); SPTR: Glucose-inhibited division protein A; hypothetical protein 1304092 10815531 Flexsi_1227 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603450.1 1302881 R 717231 CDS YP_004603451.1 336323484 10815532 complement(1304108..1305811) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; COGs: COG1796 DNA polymerase IV (family X); InterPro IPR004013:IPR002054:IPR003141; KEGG: ddf:DEFDS_1013 DNA polymerase family X; PFAM: PHP, C-terminal; SMART: DNA-directed DNA polymerase, family X; Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase, family X; glutamate synthase 1305811 10815532 Flexsi_1228 Flexistipes sinusarabici DSM 4947 glutamate synthase YP_004603451.1 1304108 R 717231 CDS YP_004603452.1 336323485 10815533 complement(1305983..1307692) 1 NC_015672.1 PFAM: PHP domain; COGs: COG1896 hydrolase of HD superfamily; KEGG: sfu:Sfum_0396 HAD superfamily hydrolase; SPTR: Hydrolase (HAD superfamily); PHP domain-containing protein 1307692 10815533 Flexsi_1229 Flexistipes sinusarabici DSM 4947 PHP domain-containing protein YP_004603452.1 1305983 R 717231 CDS YP_004603453.1 336323486 10815534 complement(1307708..1308892) 1 NC_015672.1 COGs: COG0861 Membrane protein TerC possibly involved in tellurium resistance; InterPro IPR005496; KEGG: azl:AZL_002460 TerC-like membrane protein; PFAM: Integral membrane protein TerC; SPTR: TerC-like membrane protein; HAD superfamily hydrolase 1308892 10815534 Flexsi_1230 Flexistipes sinusarabici DSM 4947 HAD superfamily hydrolase YP_004603453.1 1307708 R 717231 CDS YP_004603454.1 336323487 10815535 complement(1308905..1309624) 1 NC_015672.1 PFAM: Integral membrane protein TerC family; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: ant:Arnit_0124 family 7 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; integral membrane protein TerC 1309624 10815535 Flexsi_1231 Flexistipes sinusarabici DSM 4947 integral membrane protein TerC YP_004603454.1 1308905 R 717231 CDS YP_004603455.1 336323488 10815536 complement(1309836..1310915) 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR010656:IPR004681; KEGG: trap dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; family 7 extracellular solute-binding protein 1310915 10815536 Flexsi_1232 Flexistipes sinusarabici DSM 4947 family 7 extracellular solute-binding protein YP_004603455.1 1309836 R 717231 CDS YP_004603456.1 336323489 10815537 complement(1311146..1312489) 1 NC_015672.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: ant:Arnit_0123 tripartite ATP-independent periplasmic transporter subunit DctQ; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; TRAP dicarboxylate transporter subunit DctM 1312489 10815537 Flexsi_1233 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctM YP_004603456.1 1311146 R 717231 CDS YP_004603457.1 336323490 10815538 complement(1312489..1313034) 1 NC_015672.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: ant:Arnit_0124 family 7 extracellular solute-binding protein; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; tripartite AtP-independent periplasmic transporter subunit DctQ 1313034 10815538 Flexsi_1234 Flexistipes sinusarabici DSM 4947 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004603457.1 1312489 R 717231 CDS YP_004603458.1 336323491 10815539 complement(1313146..1314219) 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; InterPro IPR000866; KEGG: cni:Calni_0068 alkyl hydroperoxide reductase/thiol specific antioxidant/mal allergen; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; family 7 extracellular solute-binding protein 1314219 10815539 Flexsi_1235 Flexistipes sinusarabici DSM 4947 family 7 extracellular solute-binding protein YP_004603458.1 1313146 R 717231 CDS YP_004603459.1 336323492 10815540 1314733..1315170 1 NC_015672.1 PFAM: AhpC/TSA family; COGs: COG3448 CBS-domain-containing membrane protein; InterPro IPR000644:IPR002912; KEGG: ddf:DEFDS_1490 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein; alkyl hydroperoxide reductase 1315170 10815540 Flexsi_1236 Flexistipes sinusarabici DSM 4947 alkyl hydroperoxide reductase YP_004603459.1 1314733 D 717231 CDS YP_004603460.1 336323493 10815541 complement(1315179..1315856) 1 NC_015672.1 PFAM: CBS domain; ACT domain; COGs: COG1541 Coenzyme F390 synthetase; InterPro IPR000873; KEGG: cni:Calni_1820 phenylacetate-CoA ligase; PFAM: AMP-dependent synthetase/ligase; SPTR: Phenylacetate-CoA ligase; hypothetical protein 1315856 10815541 Flexsi_1237 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603460.1 1315179 R 717231 CDS YP_004603461.1 336323494 10815542 complement(1315865..1317022) 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_1821 amino acid/amide abc transporter ATP-binding protein 2, haat family; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; AMP-dependent synthetase and ligase 1317022 10815542 Flexsi_1238 Flexistipes sinusarabici DSM 4947 AMP-dependent synthetase and ligase YP_004603461.1 1315865 R 717231 CDS YP_004603462.1 336323495 10815543 complement(1317010..1317795) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_1493 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; ABC transporter-like protein 1317795 10815543 Flexsi_1239 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004603462.1 1317010 R 717231 CDS YP_004603463.1 336323496 10815544 complement(1317795..1318940) 1 NC_015672.1 COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_1494 branched-chain amino acid ABC transporter permease; PFAM: Bacterial inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; extracellular ligand-binding receptor 1318940 10815544 Flexsi_1240 Flexistipes sinusarabici DSM 4947 extracellular ligand-binding receptor YP_004603463.1 1317795 R 717231 CDS YP_004603464.1 336323497 10815545 complement(1319004..1320056) 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: cni:Calni_1824 amino acid/amide abc transporter membrane protein 1, haat family; PFAM: Bacterial inner-membrane translocator; SPTR: Amino acid/amide ABC transporter membrane protein 1, HAAT family; ABC transporter 1320056 10815545 Flexsi_1241 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603464.1 1319004 R 717231 CDS YP_004603465.1 336323498 10815546 complement(1320053..1320940) 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: cni:Calni_1825 amp-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: AMP-dependent synthetase and ligase; ABC transporter 1320940 10815546 Flexsi_1242 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603465.1 1320053 R 717231 CDS YP_004603466.1 336323499 10815547 complement(1320937..1322841) 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_1826 amino acid/amide abc transporter ATP-binding protein 1, haat family; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; long-chain-fatty-acid--CoA ligase 1322841 10815547 Flexsi_1243 Flexistipes sinusarabici DSM 4947 long-chain-fatty-acid--CoA ligase YP_004603466.1 1320937 R 717231 CDS YP_004603467.1 336323500 10815548 complement(1322832..1323614) 1 NC_015672.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG1331 Highly conserved protein containing a thioredoxin domain; InterPro IPR004879; KEGG: ddf:DEFDS_1296 hypothetical protein; SPTR: Putative uncharacterized protein; sulfate-transporting ATPase 1323614 10815548 Flexsi_1244 Flexistipes sinusarabici DSM 4947 sulfate-transporting ATPase YP_004603467.1 1322832 R 717231 CDS YP_004603468.1 336323501 10815549 1323839..1325554 1 NC_015672.1 PFAM: Protein of unknown function, DUF255; KEGG: ddf:DEFDS_1290 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1325554 10815549 Flexsi_1245 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603468.1 1323839 D 717231 CDS YP_004603469.1 336323502 10815550 1325903..1326172 1 NC_015672.1 PFAM: Membrane protein of unknown function (DUF340); COGs: COG2431 membrane protein; InterPro IPR005642; KEGG: ddf:DEFDS_1289 hypothetical protein; PFAM: Protein of unknown function DUF340, prokaryotic membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1326172 10815550 Flexsi_1246 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603469.1 1325903 D 717231 CDS YP_004603470.1 336323503 10815551 1326169..1326762 1 NC_015672.1 PFAM: Membrane protein of unknown function (DUF340); COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ddf:DEFDS_1457 radical SAM domain protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Radical SAM domain protein; hypothetical protein 1326762 10815551 Flexsi_1247 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603470.1 1326169 D 717231 CDS YP_004603471.1 336323504 10815552 complement(1326769..1327848) 1 NC_015672.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM additional 4Fe4S-binding domain; KEGG: dap:Dacet_2935 transcriptional regulator, TraR/DksA family; SPTR: Transcriptional regulator, TraR/DksA family; radical SAM protein 1327848 10815552 Flexsi_1248 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004603471.1 1326769 R 717231 CDS YP_004603472.1 336323505 10815553 complement(1327969..1328316) 1 NC_015672.1 PFAM: Prokaryotic dksA/traR C4-type zinc finger; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: dap:Dacet_2435 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; TraR/DksA family transcriptional regulator 1328316 10815553 Flexsi_1249 Flexistipes sinusarabici DSM 4947 TraR/DksA family transcriptional regulator YP_004603472.1 1327969 R 717231 CDS YP_004603473.1 336323506 10815554 complement(1328337..1329059) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1125 ABC-type proline/glycine betaine transport systems ATPase components; InterPro IPR005892:IPR003439:IPR000644:IPR003593; KEGG: dap:Dacet_2436 glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter-like; Cystathionine beta-synthase, core; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; Cystathionine beta-synthase, core; SPTR: Glycine betaine/L-proline ABC transporter, ATPase subunit; TIGRFAM: Glycine betaine/L-proline transport ATP-binding subunit; ABC transporter 1329059 10815554 Flexsi_1250 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603473.1 1328337 R 717231 CDS YP_004603474.1 336323507 10815555 complement(1329043..1330131) 1 NC_015672.1 PFAM: ABC transporter; CBS domain; TIGRFAM: glycine betaine/L-proline transport ATP binding subunit; COGs: COG1174 ABC-type proline/glycine betaine transport systems permease component; InterPro IPR000515; KEGG: dap:Dacet_2437 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; glycine betaine/L-proline ABC transporter ATPase 1330131 10815555 Flexsi_1251 Flexistipes sinusarabici DSM 4947 glycine betaine/L-proline ABC transporter ATPase YP_004603474.1 1329043 R 717231 CDS YP_004603475.1 336323508 10815556 complement(1330118..1331320) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein); InterPro IPR007210; KEGG: dap:Dacet_2438 substrate-binding region of ABC-type glycine betaine transport system; PFAM: ABC-type glycine betaine transport system, substrate-binding region; SPTR: Substrate-binding region of ABC-type glycine betaine transport system; manually curated; ABC transporter 1331320 10815556 Flexsi_1252 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603475.1 1330118 R 717231 CDS YP_004603476.1 336323509 10815557 complement(1331304..1332245) 1 NC_015672.1 PFAM: Substrate binding domain of ABC-type glycine betaine transport system; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; glycine betaine ABC transporter periplasmic subunit 1332245 10815557 Flexsi_1253 Flexistipes sinusarabici DSM 4947 glycine betaine ABC transporter periplasmic subunit YP_004603476.1 1331304 R 717231 CDS YP_004603477.1 336323510 10815558 1332401..1334236 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: pin:Ping_0589 cyclic-di-GMP regulatory protein; SPTR: Regulatory protein for cyclic-di-GMP, EAL/GGDEF domains; transposase IS4 family protein 1334236 10815558 Flexsi_1254 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603477.1 1332401 D 717231 CDS YP_004603478.1 336323511 10815559 complement(1334305..1334520) 1 NC_015672.1 COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160; KEGG: diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; cyclic-di-GMP regulatory protein 1334520 10815559 Flexsi_1255 Flexistipes sinusarabici DSM 4947 cyclic-di-GMP regulatory protein YP_004603478.1 1334305 R 717231 CDS YP_004603479.1 336323512 10815560 complement(1334719..1335615) 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; diguanylate cyclase 1335615 10815560 Flexsi_1256 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004603479.1 1334719 R 717231 CDS YP_004603480.1 336323513 10815562 complement(1336011..1336751) 1 NC_015672.1 PFAM: EamA-like transporter family; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 1336751 10815562 Flexsi_1257 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603480.1 1336011 R 717231 CDS YP_004603481.1 336323514 10815563 1336867..1337916 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein 1337916 10815563 Flexsi_1258 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603481.1 1336867 D 717231 CDS YP_004603482.1 336323515 10815565 complement(1338242..1338481) 1 NC_015672.1 COGs: COG0268 Ribosomal protein S20; HAMAP: Ribosomal protein S20; InterPro IPR002583; KEGG: ddf:DEFDS_1532 30S ribosomal protein S20; PFAM: Ribosomal protein S20; SPTR: 30S ribosomal protein S20; TIGRFAM: Ribosomal protein S20; hypothetical protein 1338481 10815565 Flexsi_1260 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603482.1 1338242 R 717231 CDS YP_004603483.1 336323516 10815566 complement(1338521..1338796) 1 NC_015672.1 PFAM: Ribosomal protein S20; TIGRFAM: ribosomal protein S20; InterPro IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; SPTR: Pilin inverting protein, putative; 30S ribosomal protein S20 1338796 10815566 Flexsi_1261 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S20 YP_004603483.1 1338521 R 717231 CDS YP_004603484.1 336323517 10815567 complement(1339301..1339741) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; InterPro IPR002525; KEGG: tye:THEYE_A1667 pilin inverting protein, putative; PFAM: Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; transposase IS116/IS110/IS902 family protein 1339741 10815567 Flexsi_1262 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004603484.1 1339301 R 717231 CDS YP_004603485.1 336323518 10815568 complement(1339789..1340313) 1 NC_015672.1 PFAM: Transposase; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; transposase IS111A/IS1328/IS1533 1340313 10815568 Flexsi_1263 Flexistipes sinusarabici DSM 4947 transposase IS111A/IS1328/IS1533 YP_004603485.1 1339789 R 717231 CDS YP_004603486.1 336323519 10815569 1340659..1342026 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG4123 O-methyltransferase; InterPro IPR007848; KEGG: ddf:DEFDS_1884 SAM-dependent methyltransferase; PFAM: Methyltransferase small; SPTR: SAM-dependent methyltransferase; transposase IS4 family protein 1342026 10815569 Flexsi_1264 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603486.1 1340659 D 717231 CDS YP_004603487.1 336323520 10815570 complement(1342544..1343260) 1 NC_015672.1 PFAM: Methyltransferase small domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR013767:IPR003661:IPR003594:IPR 001789; KEGG: ppd:Ppro_2598 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS fold; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; PAS; Signal transduction response regulator, receiver region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; methyltransferase small 1343260 10815570 Flexsi_1265 Flexistipes sinusarabici DSM 4947 methyltransferase small YP_004603487.1 1342544 R 717231 CDS YP_004603488.1 336323521 10815571 complement(1343247..1346261) 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; His Kinase A (phosphoacceptor) domain; Protein of unknown function (DUF3365); PAS fold; TIGRFAM: PAS domain S-box; multi-sensor hybrid histidine kinase 1346261 10815571 Flexsi_1266 Flexistipes sinusarabici DSM 4947 multi-sensor hybrid histidine kinase YP_004603488.1 1343247 R 717231 CDS YP_004603489.1 336323522 10815572 1346742..1346930 1 NC_015672.1 InterPro IPR007712; KEGG: mrb:Mrub_0782 plasmid stabilization system; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system; hypothetical protein 1346930 10815572 Flexsi_1267 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603489.1 1346742 D 717231 CDS YP_004603490.1 336323523 10815573 1346923..1347177 1 NC_015672.1 PFAM: Plasmid stabilisation system protein; plasmid stabilization system 1347177 10815573 Flexsi_1268 Flexistipes sinusarabici DSM 4947 plasmid stabilization system YP_004603490.1 1346923 D 717231 CDS YP_004603491.1 336323524 10815576 complement(1347960..1349114) 1 NC_015672.1 PFAM: Peptidase family M23; COGs: COG0586 membrane-associated protein; InterPro IPR015414; KEGG: cni:Calni_0279 SNARE associated golgi protein-related protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-related protein; peptidase M23 1349114 10815576 Flexsi_1269 Flexistipes sinusarabici DSM 4947 peptidase M23 YP_004603491.1 1347960 R 717231 CDS YP_004603492.1 336323525 10815577 complement(1349119..1349724) 1 NC_015672.1 PFAM: SNARE associated Golgi protein; COGs: COG0497 ATPase involved in DNA repair; InterPro IPR004604:IPR003395; KEGG: cni:Calni_0278 DNA repair protein RecN; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: DNA repair protein RecN; TIGRFAM: DNA recombination/repair protein RecN; hypothetical protein 1349724 10815577 Flexsi_1270 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603492.1 1349119 R 717231 CDS YP_004603493.1 336323526 10815578 complement(1349721..1351370) 1 NC_015672.1 PFAM: RecF/RecN/SMC N terminal domain; TIGRFAM: DNA repair protein RecN; COGs: COG0061 sugar kinase; HAMAP: inorganic polyphosphate/ATP-NAD kinase; InterPro IPR002504; KEGG: ddf:DEFDS_0942 NAD(+) kinase; PFAM: ATP-NAD/AcoX kinase; PRIAM: NAD(+) kinase; SPTR: Probable inorganic polyphosphate/ATP-NAD kinase; DNA repair protein RecN 1351370 10815578 Flexsi_1271 Flexistipes sinusarabici DSM 4947 DNA repair protein RecN YP_004603493.1 1349721 R 717231 CDS YP_004603494.1 336323527 10815579 complement(1351370..1352227) 1 NC_015672.1 PFAM: ATP-NAD kinase; COGs: COG1189 rRNA methylase; InterPro IPR004538:IPR002942:IPR002877; KEGG: ddf:DEFDS_0943 hemolysin A; PFAM: Ribosomal RNA methyltransferase RrmJ/FtsJ; RNA-binding S4; SMART: RNA-binding S4; SPTR: Hemolysin A; TIGRFAM: Haemolysin A; inorganic polyphosphate/ATP-NAD kinase 1352227 10815579 Flexsi_1272 Flexistipes sinusarabici DSM 4947 inorganic polyphosphate/ATP-NAD kinase YP_004603494.1 1351370 R 717231 CDS YP_004603495.1 336323528 10815580 complement(1352199..1353008) 1 NC_015672.1 PFAM: S4 domain; FtsJ-like methyltransferase; TIGRFAM: hemolysin TlyA family protein; COGs: COG1154 Deoxyxylulose-5-phosphate synthase; HAMAP: Deoxyxylulose-5-phosphate synthase; InterPro IPR005477:IPR005475:IPR005476; KEGG: ddf:DEFDS_0944 1-deoxy-D-xylulose-5-phosphate synthase; PFAM: Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; PRIAM: 1-deoxy-D-xylulose-5-phosphate synthase; SPTR: 1-deoxy-D-xylulose-5-phosphate synthase; TIGRFAM: Deoxyxylulose-5-phosphate synthase; hemolysin A 1353008 10815580 Flexsi_1273 Flexistipes sinusarabici DSM 4947 hemolysin A YP_004603495.1 1352199 R 717231 CDS YP_004603496.1 336323529 10815581 complement(1352990..1354855) 1 NC_015672.1 PFAM: Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; Thiamine pyrophosphate enzyme, C-terminal TPP binding domain; TIGRFAM: 1-deoxy-D-xylulose-5-phosphate synthase; COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: dap:Dacet_1901 polyprenyl synthetase; PFAM: Polyprenyl synthetase; SPTR: Polyprenyl synthetase; 1-deoxy-D-xylulose-5-phosphate synthase 1354855 10815581 Flexsi_1274 Flexistipes sinusarabici DSM 4947 1-deoxy-D-xylulose-5-phosphate synthase YP_004603496.1 1352990 R 717231 CDS YP_004603497.1 336323530 10815582 complement(1355079..1355978) 1 NC_015672.1 PFAM: Polyprenyl synthetase; HAMAP: Exonuclease VII, small subunit; InterPro IPR003761; KEGG: ddf:DEFDS_0946 exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII, small subunit; SPTR: Exodeoxyribonuclease 7 small subunit; TIGRFAM: Exonuclease VII, small subunit; polyprenyl synthetase 1355978 10815582 Flexsi_1275 Flexistipes sinusarabici DSM 4947 polyprenyl synthetase YP_004603497.1 1355079 R 717231 CDS YP_004603498.1 336323531 10815583 complement(1355959..1356198) 1 NC_015672.1 PFAM: Exonuclease VII small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; exodeoxyribonuclease 7 small subunit 1356198 10815583 Flexsi_1276 Flexistipes sinusarabici DSM 4947 exodeoxyribonuclease 7 small subunit YP_004603498.1 1355959 R 717231 CDS YP_004603499.1 336323532 10815584 complement(1356574..1357632) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG2217 Cation transport ATPase; InterProIPR006416:IPR001757:IPR006121:IPR008250:IPR 005834; KEGG: cac:CA_C2241 cation transport P-type ATPase; PFAM: ATPase, P-type, ATPase-associated region; Heavy metal transport/detoxification protein; Haloacid dehalogenase-like hydrolase; PRIAM: Cadmium-exporting ATPase; SPTR: Cation transport P-type ATPase; TIGRFAM: ATPase, P-type, heavy metal translocating; ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter; transposase IS4 family protein 1357632 10815584 Flexsi_1277 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603499.1 1356574 R 717231 CDS YP_004603500.1 336323533 10815585 complement(1357857..1359944) 1 NC_015672.1 PFAM: E1-E2 ATPase; Heavy-metal-associated domain; haloacid dehalogenase-like hydrolase; TIGRFAM: heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: fno:Fnod_0771 regulatory protein ArsR; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: Regulatory protein ArsR; heavy metal translocating P-type ATPase 1359944 10815585 Flexsi_1278 Flexistipes sinusarabici DSM 4947 heavy metal translocating P-type ATPase YP_004603500.1 1357857 R 717231 CDS YP_004603501.1 336323534 10815586 complement(1359948..1360244) 1 NC_015672.1 PFAM: Bacterial regulatory protein, arsR family; manually curated; ArsR family transcriptional regulator 1360244 10815586 Flexsi_1279 Flexistipes sinusarabici DSM 4947 ArsR family transcriptional regulator YP_004603501.1 1359948 R 717231 CDS YP_004603502.1 336323535 10815588 1361418..1361804 1 NC_015672.1 PFAM: ABC transporter; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Probable transposase; ABC transporter-like protein 1361804 10815588 Flexsi_1281 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004603502.1 1361418 D 717231 CDS YP_004603503.1 336323536 10815589 complement(1362003..1362977) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 1362977 10815589 Flexsi_1282 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603503.1 1362003 R 717231 CDS YP_004603504.1 336323537 10815590 1363059..1364108 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); KEGG: sun:SUN_1938 hypothetical protein; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 1364108 10815590 Flexsi_1283 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603504.1 1363059 D 717231 CDS YP_004603505.1 336323538 10815591 complement(1364262..1364663) 1 NC_015672.1 manually curated; hypothetical protein 1364663 10815591 Flexsi_1284 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603505.1 1364262 R 717231 CDS YP_004603506.1 336323539 10815593 1365024..1367519 1 NC_015672.1 PFAM: Predicted permease; COGs: COG0021 Transketolase; InterPro IPR005474:IPR005475:IPR005476; KEGG: ddf:DEFDS_0073 hypothetical protein; PFAM: Transketolase, N-terminal; Transketolase-like, pyrimidine-binding domain; Transketolase, C-terminal; SPTR: Putative uncharacterized protein; hypothetical protein 1367519 10815593 Flexsi_1286 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603506.1 1365024 D 717231 CDS YP_004603507.1 336323540 10815594 1367750..1369672 1 NC_015672.1 PFAM: Transketolase, thiamine diphosphate binding domain; Transketolase, C-terminal domain; Transketolase, pyrimidine binding domain; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: ddf:DEFDS_0658 branched-chain amino acid ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Branched-chain amino acid ABC transporter, ATP-binding protein; transketolase domain-containing protein 1369672 10815594 Flexsi_1287 Flexistipes sinusarabici DSM 4947 transketolase domain-containing protein YP_004603507.1 1367750 D 717231 CDS YP_004603508.1 336323541 10815595 complement(1369927..1370652) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: dat:HRM2_04920 LivG2; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: LivG2; Fe(3+)-transporting ATPase 1370652 10815595 Flexsi_1288 Flexistipes sinusarabici DSM 4947 Fe(3+)-transporting ATPase YP_004603508.1 1369927 R 717231 CDS YP_004603509.1 336323542 10815596 complement(1370642..1371412) 1 NC_015672.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: ddf:DEFDS_0656 branched-chain amino acid ABC transporter permease; PFAM: Bacterial inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease; monosaccharide-transporting ATPase 1371412 10815596 Flexsi_1289 Flexistipes sinusarabici DSM 4947 monosaccharide-transporting ATPase YP_004603509.1 1370642 R 717231 CDS YP_004603510.1 336323543 10815597 complement(1371414..1372358) 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: dps:DP2489 high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); PFAM: Bacterial inner-membrane translocator; SPTR: Probable high-affinity branched-chain amino acid ABC-transporter, permease protein (BraD); ABC transporter 1372358 10815597 Flexsi_1290 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603510.1 1371414 R 717231 CDS YP_004603511.1 336323544 10815598 complement(1372358..1373257) 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: ddf:DEFDS_0654 branched-chain amino acid ABC transporter substrate-binding protein; PFAM: Extracellular ligand-binding receptor; SPTR: Branched-chain amino acid ABC transporter, substrate-binding protein; ABC transporter 1373257 10815598 Flexsi_1291 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603511.1 1372358 R 717231 CDS YP_004603512.1 336323545 10815599 complement(1373283..1374407) 1 NC_015672.1 PFAM: Receptor family ligand binding region; COGs: COG1350 alternative tryptophan synthase beta-subunit (paralog of TrpB); HAMAP: Tryptophan synthase beta chain; InterPro IPR006316:IPR001926; KEGG: cni:Calni_2017 tryptophan synthase, beta chain; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain 1; TIGRFAM: Tryptophan synthase, beta chain-like; extracellular ligand-binding receptor 1374407 10815599 Flexsi_1292 Flexistipes sinusarabici DSM 4947 extracellular ligand-binding receptor YP_004603512.1 1373283 R 717231 CDS YP_004603513.1 336323546 10815600 1375265..1376611 1 NC_015672.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal-phosphate dependent TrpB-like enzyme; COGs: COG1636 conserved hypothetical protein; InterPro IPR003828; KEGG: ddf:DEFDS_1431 hypothetical protein; PFAM: Protein of unknown function DUF208; SPTR: Putative uncharacterized protein; tryptophan synthase subunit beta 1376611 10815600 Flexsi_1293 Flexistipes sinusarabici DSM 4947 tryptophan synthase subunit beta YP_004603513.1 1375265 D 717231 CDS YP_004603514.1 336323547 10815601 1376671..1377252 1 NC_015672.1 PFAM: Uncharacterized BCR, COG1636; KEGG: cni:Calni_0030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1377252 10815601 Flexsi_1294 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603514.1 1376671 D 717231 CDS YP_004603515.1 336323548 10815602 1377253..1377474 1 NC_015672.1 PFAM: Protein of unknown function (DUF2905); COGs: COG1278 Cold shock protein; InterPro IPR002059:IPR011129; KEGG: ddf:DEFDS_1433 cold shock protein; PFAM: Cold-shock protein, DNA-binding; SMART: Cold shock protein; SPTR: Cold shock protein; hypothetical protein 1377474 10815602 Flexsi_1295 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603515.1 1377253 D 717231 CDS YP_004603516.1 336323549 10815603 complement(1377547..1377750) 1 NC_015672.1 PFAM: 'Cold-shock' DNA-binding domain; InterPro IPR003448; KEGG: cni:Calni_1063 molybdopterin biosynthesis protein MoaE; PFAM: Molybdopterin biosynthesis MoaE; SPTR: Molybdopterin biosynthesis protein MoaE; cold-shock DNA-binding domain-containing protein 1377750 10815603 Flexsi_1296 Flexistipes sinusarabici DSM 4947 cold-shock DNA-binding domain-containing protein YP_004603516.1 1377547 R 717231 CDS YP_004603517.1 336323550 10815604 1377904..1378302 1 NC_015672.1 PFAM: MoaE protein; COGs: COG1305 Transglutaminase-like protein; InterPro IPR002931; KEGG: cni:Calni_0550 transglutaminase domain-containing protein; PFAM: Transglutaminase-like; SMART: Transglutaminase-like; SPTR: Transglutaminase domain-containing protein; molybdopterin biosynthesis MoaE protein 1378302 10815604 Flexsi_1297 Flexistipes sinusarabici DSM 4947 molybdopterin biosynthesis MoaE protein YP_004603517.1 1377904 D 717231 CDS YP_004603518.1 336323551 10815605 complement(1378321..1380249) 1 NC_015672.1 PFAM: Transglutaminase-like superfamily; Domain of unknown function (DUF3488); manually curated; transglutaminase domain-containing protein 1380249 10815605 Flexsi_1298 Flexistipes sinusarabici DSM 4947 transglutaminase domain-containing protein YP_004603518.1 1378321 R 717231 CDS YP_004603519.1 336323552 10815607 complement(1381139..1382071) 1 NC_015672.1 PFAM: ATPase family associated with various cellular activities (AAA); COGs: COG4327 membrane protein; InterPro IPR019886; KEGG: ddf:DEFDS_1575 hypothetical protein; SPTR: Putative solute symporter protein; TIGRFAM: Probable solute:sodium symporter, small subunit; ATPase 1382071 10815607 Flexsi_1300 Flexistipes sinusarabici DSM 4947 ATPase YP_004603519.1 1381139 R 717231 CDS YP_004603520.1 336323553 10815608 1382509..1382769 1 NC_015672.1 TIGRFAM: putative solute:sodium symporter small subunit; COGs: COG4147 symporter; InterPro IPR019899:IPR001734; KEGG: ddf:DEFDS_1574 solute:sodium symporter; PFAM: Sodium/solute symporter; SPTR: Solute:sodium symporter; TIGRFAM: Sodium/solute symporter, VC2705 subfamily; putative solute symporter protein 1382769 10815608 Flexsi_1301 Flexistipes sinusarabici DSM 4947 putative solute symporter protein YP_004603520.1 1382509 D 717231 CDS YP_004603521.1 336323554 10815609 1382782..1384596 1 NC_015672.1 PFAM: Sodium:solute symporter family; TIGRFAM: probable sodium:solute symporter, VC_2705 subfamily; KEGG: ddf:DEFDS_1573 hypothetical protein; SPTR: Putative uncharacterized protein; putative sodium symporter protein 1384596 10815609 Flexsi_1302 Flexistipes sinusarabici DSM 4947 putative sodium symporter protein YP_004603521.1 1382782 D 717231 CDS YP_004603522.1 336323555 10815610 1384716..1385078 1 NC_015672.1 COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: ddf:DEFDS_1572 cyclic nucleotide binding protein; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cystathionine beta-synthase, core; Cyclic nucleotide-binding; SPTR: Cyclic nucleotide binding protein; hypothetical protein 1385078 10815610 Flexsi_1303 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603522.1 1384716 D 717231 CDS YP_004603523.1 336323556 10815611 1385093..1387012 1 NC_015672.1 PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; COGs: COG0495 Leucyl-tRNA synthetase; InterPro IPR002302:IPR015413:IPR013155; KEGG: ddf:DEFDS_0790 leucyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class I (M); Valyl/Leucyl/Isoleucyl-tRNA synthetase, class I, anticodon-binding; PRIAM: Valine--tRNA ligase; SPTR: Leucyl-tRNA synthetase; TIGRFAM: Leucyl-tRNA synthetase, class Ia, bacterial/mitochondrial; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 1387012 10815611 Flexsi_1304 Flexistipes sinusarabici DSM 4947 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase YP_004603523.1 1385093 D 717231 CDS YP_004603524.1 336323557 10815612 1387525..1390083 1 NC_015672.1 PFAM: tRNA synthetases class I (I, L, M and V); Anticodon-binding domain; TIGRFAM: leucyl-tRNA synthetase, eubacterial and mitochondrial family; KEGG: cni:Calni_0470 hypothetical protein; SPTR: Putative uncharacterized protein; leucyl-tRNA synthetase 1390083 10815612 Flexsi_1305 Flexistipes sinusarabici DSM 4947 leucyl-tRNA synthetase YP_004603524.1 1387525 D 717231 CDS YP_004603525.1 336323558 10815613 1390083..1390568 1 NC_015672.1 COGs: COG1466 DNA polymerase III delta subunit; InterPro IPR010372; KEGG: cni:Calni_0471 DNA polymerase III delta; PFAM: DNA polymerase III, delta; SPTR: DNA polymerase III delta; hypothetical protein 1390568 10815613 Flexsi_1306 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603525.1 1390083 D 717231 CDS YP_004603526.1 336323559 10815614 1390552..1391469 1 NC_015672.1 PFAM: DNA polymerase III, delta subunit; TIGRFAM: DNA polymerase III, delta subunit; COGs: COG1489 DNA-binding protein stimulates sugar fermentation; HAMAP: Sugar fermentation stimulation protein; InterPro IPR005224; KEGG: cni:Calni_0493 sugar fermentation stimulation protein; PFAM: Sugar fermentation stimulation protein; SPTR: Sugar fermentation stimulation protein; TIGRFAM: Sugar fermentation stimulation protein; DNA polymerase III delta 1391469 10815614 Flexsi_1307 Flexistipes sinusarabici DSM 4947 DNA polymerase III delta YP_004603526.1 1390552 D 717231 CDS YP_004603527.1 336323560 10815615 complement(1391423..1392103) 1 NC_015672.1 PFAM: Sugar fermentation stimulation protein; TIGRFAM: sugar fermentation stimulation protein; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: ddf:DEFDS_1602 hypothetical protein; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Putative uncharacterized protein; sugar fermentation stimulation protein A 1392103 10815615 Flexsi_1308 Flexistipes sinusarabici DSM 4947 sugar fermentation stimulation protein A YP_004603527.1 1391423 R 717231 CDS YP_004603528.1 336323561 10815616 1392214..1392903 1 NC_015672.1 PFAM: Transglycosylase SLT domain; InterPro IPR000182; KEGG: dae:Dtox_2879 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; lytic transglycosylase catalytic subunit 1392903 10815616 Flexsi_1309 Flexistipes sinusarabici DSM 4947 lytic transglycosylase catalytic subunit YP_004603528.1 1392214 D 717231 CDS YP_004603529.1 336323562 10815617 1393073..1393558 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG3044 ATPase of the ABC class; InterPro IPR019195; KEGG: tit:Thit_0992 ABC transporter, ATPase, predicted; PFAM: ABC transporter, ATPase, predicted; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 1393558 10815617 Flexsi_1310 Flexistipes sinusarabici DSM 4947 N-acetyltransferase GCN5 YP_004603529.1 1393073 D 717231 CDS YP_004603530.1 336323563 10815618 complement(1393524..1395254) 1 NC_015672.1 PFAM: Predicted ATPase of the ABC class; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR001320; KEGG: drt:Dret_1093 extracellular solute-binding protein family 3; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Extracellular solute-binding protein family 3; ABC transporter ATPase 1395254 10815618 Flexsi_1311 Flexistipes sinusarabici DSM 4947 ABC transporter ATPase YP_004603530.1 1393524 R 717231 CDS YP_004603531.1 336323564 10815619 1395417..1396163 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR010065:IPR000515; KEGG: dvm:DvMF_1919 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ABC transporter periplasmic subunit 1396163 10815619 Flexsi_1312 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic subunit YP_004603531.1 1395417 D 717231 CDS YP_004603532.1 336323565 10815620 1396221..1396886 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: dsa:Desal_2287 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; polar amino acid ABC transporter inner membrane subunit 1396886 10815620 Flexsi_1313 Flexistipes sinusarabici DSM 4947 polar amino acid ABC transporter inner membrane subunit YP_004603532.1 1396221 D 717231 CDS YP_004603533.1 336323566 10815621 1396883..1397608 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0574 Phosphoenolpyruvate synthase/pyruvate phosphate dikinase; InterPro IPR002192; KEGG: dap:Dacet_2177 pyruvate phosphate dikinase PEP/pyruvate-binding protein; PFAM: Pyruvate phosphate dikinase, PEP/pyruvate-binding; SPTR: Pyruvate phosphate dikinase PEP/pyruvate-binding protein; sulfate-transporting ATPase 1397608 10815621 Flexsi_1314 Flexistipes sinusarabici DSM 4947 sulfate-transporting ATPase YP_004603533.1 1396883 D 717231 CDS YP_004603534.1 336323567 10815622 complement(1397888..1400488) 1 NC_015672.1 PFAM: Pyruvate phosphate dikinase, PEP/pyruvate binding domain; COGs: COG0334 Glutamate dehydrogenase/leucine dehydrogenase; InterPro IPR006097:IPR006096; KEGG: dap:Dacet_2178 Glu/Leu/Phe/Val dehydrogenase; PFAM: Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal; Glutamate/phenylalanine/leucine/valine dehydrogenase, dimerisation region; PRIAM: Glutamate dehydrogenase (NADP(+)); SPTR: Glu/Leu/Phe/Val dehydrogenase; pyruvate phosphate dikinase PEP/pyruvate-binding protein 1400488 10815622 Flexsi_1315 Flexistipes sinusarabici DSM 4947 pyruvate phosphate dikinase PEP/pyruvate-binding protein YP_004603534.1 1397888 R 717231 CDS YP_004603535.1 336323568 10815623 complement(1400595..1401944) 1 NC_015672.1 PFAM: Glutamate/Leucine/Phenylalanine/Valine dehydrogenase; Glu/Leu/Phe/Val dehydrogenase, dimerisation domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; glutamate dehydrogenase (NADP(+)) 1401944 10815623 Flexsi_1316 Flexistipes sinusarabici DSM 4947 glutamate dehydrogenase (NADP(+)) YP_004603535.1 1400595 R 717231 CDS YP_004603536.1 336323569 10815624 complement(1402021..1403286) 1 NC_015672.1 COGs: COG3332 conserved hypothetical protein; InterPro IPR008551; KEGG: swo:Swol_2245 hypothetical protein; PFAM: Protein of unknown function DUF833; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1403286 10815624 Flexsi_1317 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603536.1 1402021 R 717231 CDS YP_004603537.1 336323570 10815625 complement(1403576..1404361) 1 NC_015672.1 PFAM: Protein of unknown function (DUF833); COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR015590; KEGG: sfu:Sfum_1309 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: Lactaldehyde dehydrogenase; SPTR: Aldehyde dehydrogenase (NAD(+)); hypothetical protein 1404361 10815625 Flexsi_1318 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603537.1 1403576 R 717231 CDS YP_004603538.1 336323571 10815626 complement(1404365..1405792) 1 NC_015672.1 PFAM: Aldehyde dehydrogenase family; COGs: COG0277 FAD/FMN-containing dehydrogenase; InterPro IPR006094:IPR004113:IPR004017; KEGG: cni:Calni_1838 fad linked oxidase domain protein; PFAM: FAD linked oxidase, N-terminal; FAD-linked oxidase, C-terminal; Cysteine-rich region, CCG; PRIAM: D-lactate dehydrogenase (cytochrome); SPTR: FAD linked oxidase domain protein; lactaldehyde dehydrogenase 1405792 10815626 Flexsi_1319 Flexistipes sinusarabici DSM 4947 lactaldehyde dehydrogenase YP_004603538.1 1404365 R 717231 CDS YP_004603539.1 336323572 10815627 1406207..1409032 1 NC_015672.1 PFAM: Cysteine-rich domain; FAD binding domain; FAD linked oxidases, C-terminal domain; KEGG: ddf:DEFDS_1393 hypothetical protein; SPTR: Putative uncharacterized protein; D-lactate dehydrogenase 1409032 10815627 Flexsi_1320 Flexistipes sinusarabici DSM 4947 D-lactate dehydrogenase YP_004603539.1 1406207 D 717231 CDS YP_004603540.1 336323573 10815628 1409020..1410219 1 NC_015672.1 COGs: COG0621 2-methylthioadenine synthetase; HAMAP: tRNA-i(6)A37 modification enzyme MiaB; InterProIPR005839:IPR006463:IPR013848:IPR007197:IPR 002792:IPR006638; KEGG: ddf:DEFDS_1391 tRNA-i(6)A37 thiotransferase enzyme; PFAM: Methylthiotransferase, N-terminal; Radical SAM; Deoxyribonuclease/rho motif-related TRAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: tRNA-i(6)A37 thiotransferase enzyme; TIGRFAM: Methylthiotransferase; tRNA-i(6)A37 modification enzyme MiaB; hypothetical protein 1410219 10815628 Flexsi_1321 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603540.1 1409020 D 717231 CDS YP_004603541.1 336323574 10815629 1410229..1411560 1 NC_015672.1 PFAM: TRAM domain; Radical SAM superfamily; Uncharacterized protein family UPF0004; TIGRFAM: tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB; radical SAM methylthiotransferase, MiaB/RimO family; COGs: COG1259 conserved hypothetical protein; InterPro IPR003729; KEGG: ddf:DEFDS_1390 hypothetical protein; PFAM: Protein of unknown function DUF151; SPTR: Putative uncharacterized protein; (dimethylallyl)adenosine tRNA methylthiotransferase MiaB 1411560 10815629 Flexsi_1322 Flexistipes sinusarabici DSM 4947 (dimethylallyl)adenosine tRNA methylthiotransferase MiaB YP_004603541.1 1410229 D 717231 CDS YP_004603542.1 336323575 10815630 1411577..1412056 1 NC_015672.1 PFAM: Uncharacterised ACR, COG1259; COGs: COG0420 DNA repair exonuclease; InterPro IPR004843; KEGG: ddf:DEFDS_1389 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Putative uncharacterized protein; hypothetical protein 1412056 10815630 Flexsi_1323 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603542.1 1411577 D 717231 CDS YP_004603543.1 336323576 10815631 1412060..1413238 1 NC_015672.1 PFAM: Calcineurin-like phosphoesterase; Type 5 capsule protein repressor C terminal; COGs: COG4717 conserved hypothetical protein; KEGG: mbu:Mbur_1259 hypothetical protein; SPTR: ATPase domain-like membrane protein; metallophosphoesterase 1413238 10815631 Flexsi_1324 Flexistipes sinusarabici DSM 4947 metallophosphoesterase YP_004603543.1 1412060 D 717231 CDS YP_004603544.1 336323577 10815632 1413235..1416531 1 NC_015672.1 COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: cni:Calni_1842 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; hypothetical protein 1416531 10815632 Flexsi_1325 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603544.1 1413235 D 717231 CDS YP_004603545.1 336323578 10815633 1416528..1417274 1 NC_015672.1 PFAM: Carbon-nitrogen hydrolase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: aca:ACP_1229 pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulphide oxidoreductase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1417274 10815633 Flexsi_1326 Flexistipes sinusarabici DSM 4947 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004603545.1 1416528 D 717231 CDS YP_004603546.1 336323579 10815634 1417380..1418732 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1902 NADH:flavin oxidoreductase Old Yellow Enzyme family; InterPro IPR001155; KEGG: gme:Gmet_0123 flavin oxidoreductase/NADH oxidase; PFAM: NADH:flavin oxidoreductase/NADH oxidase, N-terminal; PRIAM: 2,4-dienoyl-CoA reductase (NADPH); SPTR: Flavin oxidoreductase/NADH oxidase; dihydrolipoyl dehydrogenase 1418732 10815634 Flexsi_1327 Flexistipes sinusarabici DSM 4947 dihydrolipoyl dehydrogenase YP_004603546.1 1417380 D 717231 CDS YP_004603547.1 336323580 10815635 1418775..1419866 1 NC_015672.1 PFAM: NADH:flavin oxidoreductase / NADH oxidase family; COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: ddf:DEFDS_0678 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase hydrolase; 2,4-dienoyl-CoA reductase 1419866 10815635 Flexsi_1328 Flexistipes sinusarabici DSM 4947 2,4-dienoyl-CoA reductase YP_004603547.1 1418775 D 717231 CDS YP_004603548.1 336323581 10815636 complement(1419910..1420494) 1 NC_015672.1 PFAM: Isochorismatase family; COGs: COG1232 Protoporphyrinogen oxidase; InterPro IPR004572:IPR002937; KEGG: ddf:DEFDS_1356 protoporphyrinogen oxidase; PFAM: Amine oxidase; PRIAM: Protoporphyrinogen oxidase; SPTR: Protoporphyrinogen oxidase; TIGRFAM: Protoporphyrinogen oxidase; isochorismatase hydrolase 1420494 10815636 Flexsi_1329 Flexistipes sinusarabici DSM 4947 isochorismatase hydrolase YP_004603548.1 1419910 R 717231 CDS YP_004603549.1 336323582 10815637 complement(1420512..1421891) 1 NC_015672.1 PFAM: Flavin containing amine oxidoreductase; TIGRFAM: protoporphyrinogen oxidase; InterPro IPR003790; KEGG: ddf:DEFDS_1357 hypothetical protein; PFAM: Protein of unknown function DUF187; SPTR: Putative uncharacterized protein; protoporphyrinogen oxidase 1421891 10815637 Flexsi_1330 Flexistipes sinusarabici DSM 4947 protoporphyrinogen oxidase YP_004603549.1 1420512 R 717231 CDS YP_004603550.1 336323583 10815638 complement(1421905..1423041) 1 NC_015672.1 PFAM: Uncharacterised BCR, COG1649; InterPro IPR007730; KEGG: ddf:DEFDS_1358 hypothetical protein; PFAM: Sporulation/cell division region, bacteria; SPTR: Putative uncharacterized protein; hypothetical protein 1423041 10815638 Flexsi_1331 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603550.1 1421905 R 717231 CDS YP_004603551.1 336323584 10815639 complement(1423041..1423748) 1 NC_015672.1 PFAM: Sporulation related domain; COGs: COG0018 Arginyl-tRNA synthetase; HAMAP: Arginyl-tRNA synthetase, class Ic; InterPro IPR001278:IPR005148:IPR015945:IPR008909; KEGG: cni:Calni_1453 arginyl-tRNA synthetase; PFAM: Arginyl-tRNA synthetase, class Ic, core; Arginyl tRNA synthetase, class Ic, N-terminal; DALR anticodon binding; PRIAM: Arginine--tRNA ligase; SPTR: Arginyl-tRNA synthetase; TIGRFAM: Arginyl-tRNA synthetase, class Ic; sporulation domain-containing protein 1423748 10815639 Flexsi_1332 Flexistipes sinusarabici DSM 4947 sporulation domain-containing protein YP_004603551.1 1423041 R 717231 CDS YP_004603552.1 336323585 10815640 complement(1423751..1425391) 1 NC_015672.1 PFAM: DALR anticodon binding domain; Arginyl tRNA synthetase N terminal domain; tRNA synthetases class I (R); TIGRFAM: arginyl-tRNA synthetase; COGs: COG1280 Putative threonine efflux protein; InterPro IPR001123; KEGG: hel:HELO_3429 hypothetical protein; PFAM: Lysine exporter protein (LYSE/YGGA); SPTR: Putative uncharacterized protein; arginyl-tRNA synthetase 1425391 10815640 Flexsi_1333 Flexistipes sinusarabici DSM 4947 arginyl-tRNA synthetase YP_004603552.1 1423751 R 717231 CDS YP_004603553.1 336323586 10815641 complement(1425583..1426215) 1 NC_015672.1 PFAM: LysE type translocator; TIGRFAM: The Resistance to Homoserine/Threonine (RhtB) Family protein; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; lysine exporter protein LysE/YggA 1426215 10815641 Flexsi_1334 Flexistipes sinusarabici DSM 4947 lysine exporter protein LysE/YggA YP_004603553.1 1425583 R 717231 CDS YP_004603554.1 336323587 10815642 1426871..1428238 1 NC_015672.1 PFAM: Transposase domain (DUF772); transposase IS4 family protein 1428238 10815642 Flexsi_1335 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603554.1 1426871 D 717231 CDS YP_004603555.1 336323588 10815643 complement(1430857..1430970) 1 NC_015672.1 KEGG: cni:Calni_1608 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1430970 10815643 Flexsi_1336 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603555.1 1430857 R 717231 CDS YP_004603556.1 336323589 10815644 complement(1430994..1431377) 1 NC_015672.1 InterPro IPR010173:IPR005537; KEGG: cni:Calni_1609 crispr-associated RAMP protein, csm5 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated RAMP protein, Csm5 family; TIGRFAM: CRISPR-associated protein, TM1807; hypothetical protein 1431377 10815644 Flexsi_1337 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603556.1 1430994 R 717231 CDS YP_004603557.1 336323590 10815645 complement(1431374..1432507) 1 NC_015672.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm5; InterPro IPR005537; KEGG: cni:Calni_1610 crispr-associated protein, csm4 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated protein, Csm4 family; Csm5 family CRISPR-associated RAMP protein 1432507 10815645 Flexsi_1338 Flexistipes sinusarabici DSM 4947 Csm5 family CRISPR-associated RAMP protein YP_004603557.1 1431374 R 717231 CDS YP_004603558.1 336323591 10815646 complement(1432509..1433435) 1 NC_015672.1 TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm4; COGs: COG1337 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR013412:IPR005537; KEGG: cni:Calni_1611 crispr-associated protein, csm3 family; PFAM: Protein of unknown function DUF324; SPTR: CRISPR-associated protein, Csm3 family; TIGRFAM: CRISPR-associated RAMP Csm3; hypothetical protein 1433435 10815646 Flexsi_1339 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603558.1 1432509 R 717231 CDS YP_004603559.1 336323592 10815647 complement(1433445..1434143) 1 NC_015672.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-A/MTUBE-associated RAMP protein Csm3; InterPro IPR010149; KEGG: cni:Calni_1612 crispr-associated protein, csm2 family; PFAM: CRISPR-associated protein, TM1810 C-terminal; SPTR: CRISPR-associated protein, Csm2 family; TIGRFAM: CRISPR-associated protein, TM1810 C-terminal; Csm3 family CRISPR-associated RAMP protein 1434143 10815647 Flexsi_1340 Flexistipes sinusarabici DSM 4947 Csm3 family CRISPR-associated RAMP protein YP_004603559.1 1433445 R 717231 CDS YP_004603560.1 336323593 10815648 complement(1434154..1434576) 1 NC_015672.1 PFAM: Protein of unknown function (DUF310); TIGRFAM: CRISPR type III-A/MTUBE-associated protein Csm2; This gene is disrupted by insertion of repetitive element; manually curated; CRISPR-associated protein 1434576 10815648 Flexsi_1341 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein YP_004603560.1 1434154 R 717231 CDS YP_004603561.1 336323594 10815650 complement(1435401..1436768) 1 NC_015672.1 PFAM: Transposase domain (DUF772); InterPro IPR015093; KEGG: cni:Calni_1614 hypothetical protein; PFAM: Protein of unknown function DUF1887; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1436768 10815650 Flexsi_1343 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603561.1 1435401 R 717231 CDS YP_004603562.1 336323595 10815651 complement(1438517..1439689) 1 NC_015672.1 PFAM: Domain of unknown function (DUF1887); KEGG: cni:Calni_1615 crispr-associated protein cas6; SPTR: CRISPR-associated protein Cas6; hypothetical protein 1439689 10815651 Flexsi_1344 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603562.1 1438517 R 717231 CDS YP_004603563.1 336323596 10815652 complement(1439682..1440593) 1 NC_015672.1 PFAM: Uncharacterized conserved protein (DUF2276); InterPro IPR002059; KEGG: cni:Calni_1600 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SPTR: Putative uncharacterized protein; crispr-associated protein cas6 1440593 10815652 Flexsi_1345 Flexistipes sinusarabici DSM 4947 crispr-associated protein cas6 YP_004603563.1 1439682 R 717231 CDS YP_004603564.1 336323597 10815653 1440711..1442126 1 NC_015672.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cni:Calni_1597 crispr-associated protein cas2; SPTR: CRISPR-associated protein Cas2; TIGRFAM: Protein of unknown function DUF196; cold-shock protein 1442126 10815653 Flexsi_1346 Flexistipes sinusarabici DSM 4947 cold-shock protein YP_004603564.1 1440711 D 717231 CDS YP_004603565.1 336323598 10815654 complement(1442127..1442408) 1 NC_015672.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: cni:Calni_1599 crispr-associated protein cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas2 1442408 10815654 Flexsi_1347 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas2 YP_004603565.1 1442127 R 717231 CDS YP_004603566.1 336323599 10815655 complement(1442405..1443415) 1 NC_015672.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; COGs: COG4951 conserved hypothetical protein; KEGG: cni:Calni_1598 DNA primase small subunit; SPTR: DNA primase small subunit; CRISPR-associated protein Cas1 1443415 10815655 Flexsi_1348 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas1 YP_004603566.1 1442405 R 717231 CDS YP_004603567.1 336323600 10815656 complement(1443412..1445169) 1 NC_015672.1 KEGG: cni:Calni_1607 hypothetical protein; SPTR: Putative uncharacterized protein; DNA primase small subunit 1445169 10815656 Flexsi_1349 Flexistipes sinusarabici DSM 4947 DNA primase small subunit YP_004603567.1 1443412 R 717231 CDS YP_004603568.1 336323601 10815657 1445287..1445841 1 NC_015672.1 KEGG: cni:Calni_1606 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1445841 10815657 Flexsi_1350 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603568.1 1445287 D 717231 CDS YP_004603569.1 336323602 10815658 1445831..1446496 1 NC_015672.1 KEGG: cni:Calni_1605 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1446496 10815658 Flexsi_1351 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603569.1 1445831 D 717231 CDS YP_004603570.1 336323603 10815659 1446486..1447409 1 NC_015672.1 KEGG: cni:Calni_1604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1447409 10815659 Flexsi_1352 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603570.1 1446486 D 717231 CDS YP_004603571.1 336323604 10815660 1447393..1448910 1 NC_015672.1 InterPro IPR000620; KEGG: cni:Calni_1114 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 1448910 10815660 Flexsi_1353 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603571.1 1447393 D 717231 CDS YP_004603572.1 336323605 10815661 complement(1449373..1450242) 1 NC_015672.1 PFAM: EamA-like transporter family; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003439:IPR005116:IPR003593; KEGG: dsa:Desal_2874 ABC transporter related; PFAM: ABC transporter-like; Transport-associated OB, type 1; PRIAM: Molybdate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Putative abc-transport system ATP-binding protein; hypothetical protein 1450242 10815661 Flexsi_1354 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603572.1 1449373 R 717231 CDS YP_004603573.1 336323606 10815662 complement(1450305..1451318) 1 NC_015672.1 PFAM: ABC transporter; TOBE domain; TIGRFAM: molybdenum-pterin binding domain; COGs: COG4662 ABC-type tungstate transport system periplasmic component; InterPro IPR000515; KEGG: dat:HRM2_17610 predicted ABC-type molybdate/tungstate transporter, permease component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Predicted ABC-type molybdate/tungstate transporter, permease component; molybdate-transporting ATPase 1451318 10815662 Flexsi_1355 Flexistipes sinusarabici DSM 4947 molybdate-transporting ATPase YP_004603573.1 1450305 R 717231 CDS YP_004603574.1 336323607 10815663 complement(1451318..1452007) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG2998 ABC-type tungstate transport system permease component; KEGG: dat:HRM2_17620 predicted ABC-type molybdate/tungstate transporter, periplasmic substrate binding protein; SPTR: Putative tungstate ABC transporter, tungstate-binding protein; ABC transporter 1452007 10815663 Flexsi_1356 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603574.1 1451318 R 717231 CDS YP_004603575.1 336323608 10815664 complement(1452103..1452915) 1 NC_015672.1 COGs: COG1910 Periplasmic molybdate-binding protein/domain; InterPro IPR010093; KEGG: sat:SYN_00844 molybdate-binding protein domain; SPTR: Molybdate-binding protein domain; TIGRFAM: Excisionase/Xis, DNA-binding; molybdate/tungstate ABC transporter periplasmic substrate binding protein 1452915 10815664 Flexsi_1357 Flexistipes sinusarabici DSM 4947 molybdate/tungstate ABC transporter periplasmic substrate binding protein YP_004603575.1 1452103 R 717231 CDS YP_004603576.1 336323609 10815665 complement(1452946..1453848) 1 NC_015672.1 TIGRFAM: DNA binding domain, excisionase family; KEGG: ddf:DEFDS_1360 hypothetical protein; SPTR: Putative uncharacterized protein; excisionase family DNA binding domain-containing protein 1453848 10815665 Flexsi_1358 Flexistipes sinusarabici DSM 4947 excisionase family DNA binding domain-containing protein YP_004603576.1 1452946 R 717231 CDS YP_004603577.1 336323610 10815666 1453997..1455658 1 NC_015672.1 KEGG: ddf:DEFDS_1361 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1455658 10815666 Flexsi_1359 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603577.1 1453997 D 717231 CDS YP_004603578.1 336323611 10815667 1455648..1456685 1 NC_015672.1 COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR001789; KEGG: gur:Gura_4030 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; hypothetical protein 1456685 10815667 Flexsi_1360 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603578.1 1455648 D 717231 CDS YP_004603579.1 336323612 10815668 1456678..1457319 1 NC_015672.1 PFAM: Response regulator receiver domain; KEGG: cni:Calni_0969 hypothetical protein; SPTR: Putative uncharacterized protein; response regulator receiver protein 1457319 10815668 Flexsi_1361 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004603579.1 1456678 D 717231 CDS YP_004603580.1 336323613 10815669 1457306..1457512 1 NC_015672.1 COGs: COG2884 ATPase involved in cell division; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0970 sigma 54 interacting domain protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Sigma 54 interacting domain protein; hypothetical protein 1457512 10815669 Flexsi_1362 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603580.1 1457306 D 717231 CDS YP_004603581.1 336323614 10815670 1457516..1458187 1 NC_015672.1 PFAM: ABC transporter; TIGRFAM: cell division ATP-binding protein FtsE; COGs: COG2177 Cell division protein; InterPro IPR003838; KEGG: cni:Calni_0971 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Putative uncharacterized protein; sigma 54 interacting domain-containing protein 1458187 10815670 Flexsi_1363 Flexistipes sinusarabici DSM 4947 sigma 54 interacting domain-containing protein YP_004603581.1 1457516 D 717231 CDS YP_004603582.1 336323615 10815671 1458184..1459077 1 NC_015672.1 PFAM: Predicted permease; COGs: COG4942 Membrane-bound metallopeptidase; InterPro IPR016047; KEGG: ddf:DEFDS_1364 hypothetical protein; PFAM: Peptidase M23; SPTR: Putative uncharacterized protein; hypothetical protein 1459077 10815671 Flexsi_1364 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603582.1 1458184 D 717231 CDS YP_004603583.1 336323616 10815672 1459070..1460212 1 NC_015672.1 PFAM: Peptidase family M23; COGs: COG0793 Periplasmic protease; InterPro IPR004447:IPR001478:IPR005151; KEGG: ddf:DEFDS_1365 carboxyl-terminal protease; PFAM: Peptidase S41; PDZ/DHR/GLGF; PRIAM: C-terminal processing peptidase; SMART: Peptidase S41; PDZ/DHR/GLGF; SPTR: Carboxyl-terminal protease; TIGRFAM: Peptidase S41A, C-terminal protease; peptidase M23 1460212 10815672 Flexsi_1365 Flexistipes sinusarabici DSM 4947 peptidase M23 YP_004603583.1 1459070 D 717231 CDS YP_004603584.1 336323617 10815673 1460226..1461539 1 NC_015672.1 PFAM: Peptidase family S41; PDZ domain (Also known as DHR or GLGF); TIGRFAM: C-terminal peptidase (prc); COGs: COG2861 conserved hypothetical protein; InterPro IPR006837; KEGG: cni:Calni_0974 hypothetical protein; PFAM: Protein of unknown function DUF610, YibQ; SPTR: Putative uncharacterized protein; carboxyl-terminal protease 1461539 10815673 Flexsi_1366 Flexistipes sinusarabici DSM 4947 carboxyl-terminal protease YP_004603584.1 1460226 D 717231 CDS YP_004603585.1 336323618 10815674 1461514..1462707 1 NC_015672.1 PFAM: Divergent polysaccharide deacetylase; COGs: COG0533 Metal-dependent protease with possible chaperone activity; HAMAP: O-sialoglycoprotein endopeptidase; InterPro IPR017861:IPR000905; KEGG: dap:Dacet_1813 metalloendopeptidase, glycoprotease family; PFAM: Peptidase M22, glycoprotease; PRIAM: O-sialoglycoprotein endopeptidase; SPTR: Probable O-sialoglycoprotein endopeptidase; TIGRFAM: putative glycoprotease GCP; Peptidase M22, glycoprotease, subgroup; hypothetical protein 1462707 10815674 Flexsi_1367 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603585.1 1461514 D 717231 CDS YP_004603586.1 336323619 10815675 1462704..1463696 1 NC_015672.1 PFAM: Glycoprotease family; TIGRFAM: putative glycoprotease GCP; metallohydrolase, glycoprotease/Kae1 family; COGs: COG0042 tRNA-dihydrouridine synthase; InterPro IPR001269; KEGG: ddf:DEFDS_1368 tRNA-dihydrouridine synthase; PFAM: tRNA-dihydrouridine synthase; SPTR: tRNA-dihydrouridine synthase; O-sialoglycoprotein endopeptidase 1463696 10815675 Flexsi_1368 Flexistipes sinusarabici DSM 4947 O-sialoglycoprotein endopeptidase YP_004603586.1 1462704 D 717231 CDS YP_004603587.1 336323620 10815676 1463668..1464645 1 NC_015672.1 PFAM: Dihydrouridine synthase (Dus); TIGRFAM: putative TIM-barrel protein, nifR3 family; COGs: COG1293 RNA-binding protein homologous to eukaryotic snRNP; InterPro IPR008616:IPR008532; KEGG: ddf:DEFDS_0624 fibronectin/fibrinogen-binding protein; PFAM: Protein of unknown function DUF814; Fibronectin-binding A, N-terminal; SPTR: Fibronectin/fibrinogen-binding protein; dihydrouridine synthase DuS 1464645 10815676 Flexsi_1369 Flexistipes sinusarabici DSM 4947 dihydrouridine synthase DuS YP_004603587.1 1463668 D 717231 CDS YP_004603588.1 336323621 10815677 complement(1465065..1466666) 1 NC_015672.1 PFAM: Domain of unknown function (DUF814); Fibronectin-binding protein A N-terminus (FbpA); COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482:IPR003593; KEGG: cni:Calni_1207 pilus retraction atpase PilT; PFAM: Type II secretion system protein E; SMART: ATPase, AAA+ type, core; SPTR: Pilus retraction ATPase PilT; TIGRFAM: Pilus retraction protein PilT; hypothetical protein 1466666 10815677 Flexsi_1370 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603588.1 1465065 R 717231 CDS YP_004603589.1 336323622 10815678 complement(1466671..1467729) 1 NC_015672.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; InterPro IPR007831; KEGG: ddf:DEFDS_0626 hypothetical protein; PFAM: General secretory system II, protein E, N-terminal; SPTR: Putative uncharacterized protein; twitching motility protein 1467729 10815678 Flexsi_1371 Flexistipes sinusarabici DSM 4947 twitching motility protein YP_004603589.1 1466671 R 717231 CDS YP_004603590.1 336323623 10815679 complement(1467756..1468820) 1 NC_015672.1 PFAM: GSPII_E N-terminal domain; InterPro IPR001440:IPR019734; KEGG: ddf:DEFDS_0627 hypothetical protein; PFAM: Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; general secretory system II protein E domain-containing protein 1468820 10815679 Flexsi_1372 Flexistipes sinusarabici DSM 4947 general secretory system II protein E domain-containing protein YP_004603590.1 1467756 R 717231 CDS YP_004603591.1 336323624 10815680 complement(1468813..1469853) 1 NC_015672.1 KEGG: ddf:DEFDS_1231 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1469853 10815680 Flexsi_1373 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603591.1 1468813 R 717231 CDS YP_004603592.1 336323625 10815681 1470291..1470788 1 NC_015672.1 PFAM: Thioesterase superfamily; KEGG: ddf:DEFDS_0677 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 1470788 10815681 Flexsi_1374 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603592.1 1470291 D 717231 CDS YP_004603593.1 336323626 10815682 complement(1470790..1471584) 1 NC_015672.1 KEGG: geo:Geob_1347 hypothetical protein; SPTR: Putative uncharacterized protein; multiheme C-type cytochrome 1471584 10815682 Flexsi_1375 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004603593.1 1470790 R 717231 CDS YP_004603594.1 336323627 10815683 complement(1471566..1471979) 1 NC_015672.1 hypothetical protein 1471979 10815683 Flexsi_1376 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603594.1 1471566 R 717231 CDS YP_004603595.1 336323628 10815684 1472210..1472437 1 NC_015672.1 KEGG: pop:POPTR_597343 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1472437 10815684 Flexsi_1377 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603595.1 1472210 D 717231 CDS YP_004603596.1 336323629 10815685 1472496..1473002 1 NC_015672.1 InterPro IPR002559; KEGG: sun:SUN_1976 transposase; PFAM: Transposase, IS4-like; SPTR: Probable transposase; hypothetical protein 1473002 10815685 Flexsi_1378 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603596.1 1472496 D 717231 CDS YP_004603597.1 336323630 10815686 1472999..1473814 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: dap:Dacet_1791 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1473814 10815686 Flexsi_1379 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603597.1 1472999 D 717231 CDS YP_004603598.1 336323631 10815687 complement(1474039..1474974) 1 NC_015672.1 KEGG: dap:Dacet_1790 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1474974 10815687 Flexsi_1380 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603598.1 1474039 R 717231 CDS YP_004603599.1 336323632 10815688 complement(1474919..1476754) 1 NC_015672.1 Bacterial RNase P class A as predicted by Rfam (RF00010), score 305.73; hypothetical protein 1476754 10815688 Flexsi_1381 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603599.1 1474919 R 717231 CDS YP_004603600.1 336323633 10815690 1477946..1478320 1 NC_015672.1 COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: cni:Calni_0544 hypothetical protein; PFAM: Secretion protein HlyD; SPTR: Putative uncharacterized protein; hypothetical protein 1478320 10815690 Flexsi_1382 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603600.1 1477946 D 717231 CDS YP_004603601.1 336323634 10815691 1478776..1479963 1 NC_015672.1 PFAM: HlyD family secretion protein; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0543 abc transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; secretion protein HlyD family protein 1479963 10815691 Flexsi_1383 Flexistipes sinusarabici DSM 4947 secretion protein HlyD family protein YP_004603601.1 1478776 D 717231 CDS YP_004603602.1 336323635 10815692 1479960..1481765 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0842 ABC-type multidrug transport system permease component; InterPro IPR013525; KEGG: cni:Calni_0542 abc-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; ABC transporter-like protein 1481765 10815692 Flexsi_1384 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004603602.1 1479960 D 717231 CDS YP_004603603.1 336323636 10815693 1481755..1482873 1 NC_015672.1 PFAM: ABC-2 type transporter; InterPro IPR013525; KEGG: cni:Calni_0541 abc-2 type transporter; PFAM: ABC-2 type transporter; SPTR: ABC-2 type transporter; ABC transporter 1482873 10815693 Flexsi_1385 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603603.1 1481755 D 717231 CDS YP_004603604.1 336323637 10815694 1482870..1483976 1 NC_015672.1 PFAM: ABC-2 type transporter; COGs: COG0741 Soluble lytic murein transglycosylase and related regulatory protein (some contain LysM/invasin domains); InterPro IPR008258; KEGG: cni:Calni_1365 lytic transglycosylase catalytic; PFAM: Lytic transglycosylase-like, catalytic; SPTR: Lytic transglycosylase catalytic; ABC transporter 1483976 10815694 Flexsi_1386 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603604.1 1482870 D 717231 CDS YP_004603605.1 336323638 10815695 1484085..1484678 1 NC_015672.1 PFAM: Transglycosylase SLT domain; COGs: COG0847 DNA polymerase III epsilon subunit and related 3'-5' exonuclease; InterPro IPR006054:IPR013520:IPR006055; KEGG: dap:Dacet_1757 DNA polymerase III, epsilon subunit; PFAM: Exonuclease, RNase T/DNA polymerase III; SMART: Exonuclease; SPTR: DNA polymerase III, epsilon subunit; TIGRFAM: DNA polymerase III, epsilon subunit; lytic transglycosylase catalytic subunit 1484678 10815695 Flexsi_1387 Flexistipes sinusarabici DSM 4947 lytic transglycosylase catalytic subunit YP_004603605.1 1484085 D 717231 CDS YP_004603606.1 336323639 10815696 complement(1484662..1485354) 1 NC_015672.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG0799 Iojap protein; InterPro IPR004394; KEGG: ddf:DEFDS_1380 hypothetical protein; PFAM: Iojap-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: Iojap-related protein; DNA polymerase III subunit epsilon 1485354 10815696 Flexsi_1388 Flexistipes sinusarabici DSM 4947 DNA polymerase III subunit epsilon YP_004603606.1 1484662 R 717231 CDS YP_004603607.1 336323640 10815697 complement(1485451..1485810) 1 NC_015672.1 PFAM: Domain of unknown function DUF143; TIGRFAM: iojap-like ribosome-associated protein; COGs: COG1057 Nicotinic acid mononucleotide adenylyltransferase; HAMAP: nicotinate-nucleotide adenylyltransferase; InterPro IPR004821:IPR005248:IPR004820; KEGG: ddf:DEFDS_1381 nicotinate-nucleotide adenylyltransferase; PFAM: Cytidylyltransferase; PRIAM: Nicotinate-nucleotide adenylyltransferase; SPTR: Probable nicotinate-nucleotide adenylyltransferase; TIGRFAM: Probable nicotinate-nucleotide adenylyltransferase; Cytidyltransferase-related; iojap family protein 1485810 10815697 Flexsi_1389 Flexistipes sinusarabici DSM 4947 iojap family protein YP_004603607.1 1485451 R 717231 CDS YP_004603608.1 336323641 10815698 complement(1485810..1486448) 1 NC_015672.1 PFAM: Cytidylyltransferase; TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain; COGs: COG0014 Gamma-glutamyl phosphate reductase; HAMAP: Glutamate-5-semialdehyde dehydrogenase; InterPro IPR000965:IPR012134; KEGG: ddf:DEFDS_1382 glutamate-5-semialdehyde dehydrogenase; PRIAM: Glutamate-5-semialdehyde dehydrogenase; SPTR: Gamma-glutamyl phosphate reductase; TIGRFAM: Gamma-glutamyl phosphate reductase GPR; nicotinate-nucleotide adenylyltransferase 1486448 10815698 Flexsi_1390 Flexistipes sinusarabici DSM 4947 nicotinate-nucleotide adenylyltransferase YP_004603608.1 1485810 R 717231 CDS YP_004603609.1 336323642 10815699 complement(1486452..1487684) 1 NC_015672.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: gamma-glutamyl phosphate reductase; COGs: COG0263 Glutamate 5-kinase; HAMAP: Glutamate 5-kinase; InterPro IPR005715:IPR001048:IPR002478; KEGG: ddf:DEFDS_1383 glutamate 5-kinase; PFAM: Aspartate/glutamate/uridylate kinase; Pseudouridine synthase/archaeosine transglycosylase; SMART: Pseudouridine synthase/archaeosine transglycosylase; SPTR: Glutamate 5-kinase; TIGRFAM: Glutamate 5-kinase, ProB-related; gamma-glutamyl phosphate reductase 1487684 10815699 Flexsi_1391 Flexistipes sinusarabici DSM 4947 gamma-glutamyl phosphate reductase YP_004603609.1 1486452 R 717231 CDS YP_004603610.1 336323643 10815700 complement(1487694..1488827) 1 NC_015672.1 PFAM: Amino acid kinase family; PUA domain; TIGRFAM: glutamate 5-kinase; glutamate 5-kinase 1488827 10815700 Flexsi_1392 Flexistipes sinusarabici DSM 4947 glutamate 5-kinase YP_004603610.1 1487694 R 717231 CDS YP_004603611.1 336323644 10815702 complement(1489243..1489935) 1 NC_015672.1 COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: cni:Calni_0781 had-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Phosphoglycolate phosphatase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD-superfamily hydrolase, subfamily IA, variant 3; hypothetical protein 1489935 10815702 Flexsi_1393 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603611.1 1489243 R 717231 CDS YP_004603612.1 336323645 10815703 1490279..1490911 1 NC_015672.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E; 2-phosphoglycolate phosphatase, prokaryotic; KEGG: tye:THEYE_A1944 lipoprotein, putative; SPTR: Putative uncharacterized protein; HAD-superfamily hydrolase 1490911 10815703 Flexsi_1394 Flexistipes sinusarabici DSM 4947 HAD-superfamily hydrolase YP_004603612.1 1490279 D 717231 CDS YP_004603613.1 336323646 10815704 complement(1490919..1491350) 1 NC_015672.1 PFAM: Protein of unknown function (DUF3617); COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; lipoprotein 1491350 10815704 Flexsi_1395 Flexistipes sinusarabici DSM 4947 lipoprotein YP_004603613.1 1490919 R 717231 CDS YP_004603614.1 336323647 10815705 1491490..1492539 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG3852 Signal transduction histidine kinase nitrogen specific; InterProIPR000014:IPR013655:IPR013767:IPR003594:IPR 001789:IPR001610; KEGG: dak:DaAHT2_2564 multi-sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold; PAS fold-3; Signal transduction response regulator, receiver region; SMART: ATP-binding region, ATPase-like; PAS; PAC motif; Signal transduction response regulator, receiver region; SPTR: Multi-sensor hybrid histidine kinase; TIGRFAM: PAS; transposase IS4 family protein 1492539 10815705 Flexsi_1396 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603614.1 1491490 D 717231 CDS YP_004603615.1 336323648 10815706 1492918..1496418 1 NC_015672.1 PFAM: ABC transporter substrate binding protein; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Response regulator receiver domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: nis:NIS_1506 ribosomal large subunit pseudouridine synthase D; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; multi-sensor hybrid histidine kinase 1496418 10815706 Flexsi_1397 Flexistipes sinusarabici DSM 4947 multi-sensor hybrid histidine kinase YP_004603615.1 1492918 D 717231 CDS YP_004603616.1 336323649 10815707 complement(1496452..1497177) 1 NC_015672.1 PFAM: RNA pseudouridylate synthase; pseudouridine synthase 1497177 10815707 Flexsi_1398 Flexistipes sinusarabici DSM 4947 pseudouridine synthase YP_004603616.1 1496452 R 717231 CDS YP_004603617.1 336323650 10815709 complement(1497477..1498703) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; ferredoxin--NAD(+) reductase 1498703 10815709 Flexsi_1399 Flexistipes sinusarabici DSM 4947 ferredoxin--NAD(+) reductase YP_004603617.1 1497477 R 717231 CDS YP_004603618.1 336323651 10815710 complement(1498707..1498940) 1 NC_015672.1 COGs: COG2414 Aldehyde:ferredoxin oxidoreductase; InterPro IPR013983:IPR001203; KEGG: gsu:GSU0910 aldehyde:ferredoxin oxidoreductase, tungsten-containing; PFAM: Aldehyde ferredoxin oxidoreductase, C-terminal; Aldehyde ferredoxin oxidoreductase, N-terminal; PRIAM: Aldehyde ferredoxin oxidoreductase; SMART: Aldehyde ferredoxin oxidoreductase, N-terminal; SPTR: Aldehyde:ferredoxin oxidoreductase, tungsten-containing; hypothetical protein 1498940 10815710 Flexsi_1400 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603618.1 1498707 R 717231 CDS YP_004603619.1 336323652 10815711 complement(1498998..1500800) 1 NC_015672.1 PFAM: Aldehyde ferredoxin oxidoreductase, N-terminal domain; Aldehyde ferredoxin oxidoreductase, domains 2 & 3; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_0246 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin; aldehyde ferredoxin oxidoreductase 1500800 10815711 Flexsi_1401 Flexistipes sinusarabici DSM 4947 aldehyde ferredoxin oxidoreductase YP_004603619.1 1498998 R 717231 CDS YP_004603620.1 336323653 10815712 complement(1500802..1501281) 1 NC_015672.1 PFAM: 4Fe-4S binding domain; InterPro IPR003749; KEGG: ddf:DEFDS_1122 molybdenum cofactor biosynthesis protein D; PFAM: ThiamineS; SPTR: Molybdenum cofactor biosynthesis protein D; 4Fe-4S ferredoxin 1501281 10815712 Flexsi_1402 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603620.1 1500802 R 717231 CDS YP_004603621.1 336323654 10815713 complement(1501367..1501606) 1 NC_015672.1 PFAM: ThiS family; KEGG: dap:Dacet_0430 integral membrane sensor signal transduction histidine kinase; SPTR: Integral membrane sensor signal transduction histidine kinase; sulfur transfer protein ThiS 1501606 10815713 Flexsi_1403 Flexistipes sinusarabici DSM 4947 sulfur transfer protein ThiS YP_004603621.1 1501367 R 717231 CDS YP_004603622.1 336323655 10815714 1501996..1503060 1 NC_015672.1 InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; integral membrane sensor signal transduction histidine kinase 1503060 10815714 Flexsi_1404 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004603622.1 1501996 D 717231 CDS YP_004603623.1 336323656 10815715 1503205..1504458 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0310 ABC-type Co2+ transport system permease component; InterPro IPR002751; KEGG: cni:Calni_0441 cobalamin (vitamin b12) biosynthesis CbiM protein; PFAM: Cobalamin (vitamin B12) biosynthesis CbiM; SPTR: Cobalamin (Vitamin B12) biosynthesis CbiM protein; transposase IS4 family protein 1504458 10815715 Flexsi_1405 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603623.1 1503205 D 717231 CDS YP_004603624.1 336323657 10815716 1504734..1505693 1 NC_015672.1 PFAM: Cobalt uptake substrate-specific transmembrane region; TIGRFAM: cobalamin biosynthesis protein CbiM; COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: cni:Calni_0440 cobalt transport protein; PFAM: Cobalt transport protein; SPTR: Cobalt transport protein; cobalamin (vitamin B12) biosynthesis protein CbiM 1505693 10815716 Flexsi_1406 Flexistipes sinusarabici DSM 4947 cobalamin (vitamin B12) biosynthesis protein CbiM YP_004603624.1 1504734 D 717231 CDS YP_004603625.1 336323658 10815717 1505690..1506451 1 NC_015672.1 PFAM: Cobalt transport protein; COGs: COG1122 ABC-type cobalt transport system ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0439 abc transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; ABC transporter 1506451 10815717 Flexsi_1407 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603625.1 1505690 D 717231 CDS YP_004603626.1 336323659 10815718 1506453..1507172 1 NC_015672.1 PFAM: ABC transporter; COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR006388:IPR006328:IPR005834; KEGG: slt:Slit_1336 haloacid dehalogenase, type II; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: (S)-2-haloacid dehalogenase; SPTR: Haloacid dehalogenase, type II; TIGRFAM: Haloacid dehalogenase, type II; HAD-superfamily hydrolase, subfamily IA, variant 2; phosphonate-transporting ATPase 1507172 10815718 Flexsi_1408 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004603626.1 1506453 D 717231 CDS YP_004603627.1 336323660 10815719 complement(1507166..1507843) 1 NC_015672.1 PFAM: haloacid dehalogenase-like hydrolase; TIGRFAM: Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase; 2-haloalkanoic acid dehalogenase, type II; KEGG: cyp:PCC8801_3050 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; haloacid dehalogenase 1507843 10815719 Flexsi_1409 Flexistipes sinusarabici DSM 4947 haloacid dehalogenase YP_004603627.1 1507166 R 717231 CDS YP_004603628.1 336323661 10815720 complement(1508285..1508599) 1 NC_015672.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_2552 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; hypothetical protein 1508599 10815720 Flexsi_1410 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603628.1 1508285 R 717231 CDS YP_004603629.1 336323662 10815721 complement(1509209..1511044) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG3956 Protein containing tetrapyrrole methyltransferase domain and MazG-like (predicted pyrophosphatase) domain; InterPro IPR011551:IPR004518; KEGG: ddf:DEFDS_1789 MazG family protein; PFAM: NTP pyrophosphohydrolase MazG, putative catalytic core; SPTR: MazG family protein; TIGRFAM: NTP pyrophosphohydrolase MazG, bacterial; transposase IS4 family protein 1511044 10815721 Flexsi_1411 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603629.1 1509209 R 717231 CDS YP_004603630.1 336323663 10815722 1511635..1512450 1 NC_015672.1 PFAM: MazG nucleotide pyrophosphohydrolase domain; TIGRFAM: MazG family protein; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; MazG family protein 1512450 10815722 Flexsi_1412 Flexistipes sinusarabici DSM 4947 MazG family protein YP_004603630.1 1511635 D 717231 CDS YP_004603631.1 336323664 10815723 1512667..1513986 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: ddf:DEFDS_1790 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1513986 10815723 Flexsi_1413 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603631.1 1512667 D 717231 CDS YP_004603632.1 336323665 10815724 1514245..1514487 1 NC_015672.1 COGs: COG0251 Putative translation initiation inhibitor yjgF family; InterPro IPR006056:IPR006175; KEGG: cni:Calni_0563 endoribonuclease L-psp; PFAM: Endoribonuclease L-PSP; SPTR: Endoribonuclease L-PSP; TIGRFAM: YjgF-like protein; hypothetical protein 1514487 10815724 Flexsi_1414 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603632.1 1514245 D 717231 CDS YP_004603633.1 336323666 10815725 complement(1514709..1515089) 1 NC_015672.1 PFAM: Endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP, putative; KEGG: ddf:DEFDS_0649 hypothetical protein; SPTR: Putative uncharacterized protein; endoribonuclease L-PSP 1515089 10815725 Flexsi_1415 Flexistipes sinusarabici DSM 4947 endoribonuclease L-PSP YP_004603633.1 1514709 R 717231 CDS YP_004603634.1 336323667 10815726 complement(1515100..1515783) 1 NC_015672.1 COGs: COG0142 Geranylgeranyl pyrophosphate synthase; InterPro IPR000092; KEGG: ddf:DEFDS_0648 octaprenyl-diphosphate synthase; PFAM: Polyprenyl synthetase; PRIAM: Trans-hexaprenyltranstransferase; SPTR: Octaprenyl-diphosphate synthase; hypothetical protein 1515783 10815726 Flexsi_1416 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603634.1 1515100 R 717231 CDS YP_004603635.1 336323668 10815727 1516120..1517094 1 NC_015672.1 PFAM: Polyprenyl synthetase; COGs: COG1180 Pyruvate-formate lyase-activating enzyme; InterPro IPR007197; KEGG: ddf:DEFDS_0647 pyruvate-formate lyase-activating enzyme; PFAM: Radical SAM; SPTR: Pyruvate-formate lyase-activating enzyme; trans-hexaprenyltranstransferase 1517094 10815727 Flexsi_1417 Flexistipes sinusarabici DSM 4947 trans-hexaprenyltranstransferase YP_004603635.1 1516120 D 717231 CDS YP_004603636.1 336323669 10815728 1517094..1518095 1 NC_015672.1 PFAM: Radical SAM superfamily; COGs: COG1477 Membrane-associated lipoprotein involved in thiamine biosynthesis; InterPro IPR003374; KEGG: ddf:DEFDS_0646 thiamine biosynthesis lipoprotein ApbE; PFAM: ApbE-like lipoprotein; SPTR: Thiamine biosynthesis lipoprotein ApbE; radical SAM protein 1518095 10815728 Flexsi_1418 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004603636.1 1517094 D 717231 CDS YP_004603637.1 336323670 10815729 1518095..1519063 1 NC_015672.1 PFAM: ApbE family; InterPro IPR010739; KEGG: ddf:DEFDS_0645 hypothetical protein; PFAM: Protein of unknown function DUF1312; SPTR: Putative uncharacterized protein; ApbE family lipoprotein 1519063 10815729 Flexsi_1419 Flexistipes sinusarabici DSM 4947 ApbE family lipoprotein YP_004603637.1 1518095 D 717231 CDS YP_004603638.1 336323671 10815730 1519047..1519412 1 NC_015672.1 PFAM: Protein of unknown function (DUF1312); COGs: COG4769 membrane protein; InterPro IPR010898; KEGG: ddf:DEFDS_0644 hypothetical protein; PFAM: Heptaprenyl diphosphate synthase component I; SPTR: Putative uncharacterized protein; hypothetical protein 1519412 10815730 Flexsi_1420 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603638.1 1519047 D 717231 CDS YP_004603639.1 336323672 10815731 1519396..1519899 1 NC_015672.1 PFAM: Heptaprenyl diphosphate synthase component I; COGs: COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; HAMAP: Maf-like protein; InterPro IPR003697; KEGG: cni:Calni_0556 maf protein; PFAM: Maf-like protein; SPTR: Maf-like protein Calni_0556; TIGRFAM: Maf-like protein; heptaprenyl diphosphate synthase component I 1519899 10815731 Flexsi_1421 Flexistipes sinusarabici DSM 4947 heptaprenyl diphosphate synthase component I YP_004603639.1 1519396 D 717231 CDS YP_004603640.1 336323673 10815732 1519915..1520517 1 NC_015672.1 PFAM: Maf-like protein; TIGRFAM: MAF protein; COGs: COG0318 Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II; InterPro IPR000873; KEGG: ddf:DEFDS_0642 long-chain fatty-acid-CoA ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: Long-chain fatty-acid-CoA ligase; Septum formation protein Maf 1520517 10815732 Flexsi_1422 Flexistipes sinusarabici DSM 4947 Septum formation protein Maf YP_004603640.1 1519915 D 717231 CDS YP_004603641.1 336323674 10815733 1520504..1522060 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG1123 ATPase components of various ABC-type transport systems contain duplicated ATPase; InterPro IPR003439:IPR013563:IPR003593; KEGG: ddf:DEFDS_0839 phosphate-transporting ATPase; PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; PRIAM: Nickel-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Phosphate-transporting ATPase; long-chain-fatty-acid--CoA ligase 1522060 10815733 Flexsi_1423 Flexistipes sinusarabici DSM 4947 long-chain-fatty-acid--CoA ligase YP_004603641.1 1520504 D 717231 CDS YP_004603642.1 336323675 10815734 1522273..1523202 1 NC_015672.1 PFAM: ABC transporter; Oligopeptide/dipeptide transporter, C-terminal region; COGs: COG0215 Cysteinyl-tRNA synthetase; InterPro IPR002308:IPR015803:IPR015273; KEGG: ddf:DEFDS_0838 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase, class Ia, N-terminal; Cysteinyl-tRNA synthetase, class Ia, DALR; PRIAM: Cysteine--tRNA ligase; SPTR: Cysteinyl-tRNA synthetase; TIGRFAM: Cysteinyl-tRNA synthetase, class Ia; nickel-transporting ATPase 1523202 10815734 Flexsi_1424 Flexistipes sinusarabici DSM 4947 nickel-transporting ATPase YP_004603642.1 1522273 D 717231 CDS YP_004603643.1 336323676 10815735 1523217..1524650 1 NC_015672.1 PFAM: tRNA synthetases class I (C) catalytic domain; DALR domain; TIGRFAM: cysteinyl-tRNA synthetase; COGs: COG0451 Nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cni:Calni_0408 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; PRIAM: UDP-glucuronate 4-epimerase; SPTR: NAD-dependent epimerase/dehydratase; cysteinyl-tRNA synthetase 1524650 10815735 Flexsi_1425 Flexistipes sinusarabici DSM 4947 cysteinyl-tRNA synthetase YP_004603643.1 1523217 D 717231 CDS YP_004603644.1 336323677 10815736 1524845..1525813 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: cni:Calni_0212 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; UDP-glucuronate 4-epimerase 1525813 10815736 Flexsi_1426 Flexistipes sinusarabici DSM 4947 UDP-glucuronate 4-epimerase YP_004603644.1 1524845 D 717231 CDS YP_004603645.1 336323678 10815737 1526018..1526821 1 NC_015672.1 PFAM: Carbon-nitrogen hydrolase; COGs: COG0427 Acetyl-CoA hydrolase; InterPro IPR003702; KEGG: cni:Calni_0213 acetyl-CoA hydrolase; PFAM: Acetyl-CoA hydrolase/transferase; PRIAM: Acetyl-CoA hydrolase; SPTR: Acetyl-CoA hydrolase; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1526821 10815737 Flexsi_1427 Flexistipes sinusarabici DSM 4947 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004603645.1 1526018 D 717231 CDS YP_004603646.1 336323679 10815738 1526832..1528388 1 NC_015672.1 PFAM: Acetyl-CoA hydrolase/transferase N-terminal domain; TIGRFAM: succinate CoA transferases; InterPro IPR000845; KEGG: dap:Dacet_1934 purine or other phosphorylase family 1; PFAM: Nucleoside phosphorylase; SPTR: Purine or other phosphorylase family 1; acetyl-CoA hydrolase 1528388 10815738 Flexsi_1428 Flexistipes sinusarabici DSM 4947 acetyl-CoA hydrolase YP_004603646.1 1526832 D 717231 CDS YP_004603647.1 336323680 10815739 complement(1528444..1529088) 1 NC_015672.1 PFAM: Phosphorylase superfamily; TIGRFAM: futalosine nucleosidase; COGs: COG0685 5 10-methylenetetrahydrofolate reductase; InterPro IPR004620:IPR003171; KEGG: ddf:DEFDS_1143 5,10-methylenetetrahydrofolate reductase; PFAM: Methylenetetrahydrofolate reductase; PRIAM: Methylenetetrahydrofolate reductase (NAD(P)H); SPTR: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase; purine or other phosphorylase family 1 1529088 10815739 Flexsi_1429 Flexistipes sinusarabici DSM 4947 purine or other phosphorylase family 1 YP_004603647.1 1528444 R 717231 CDS YP_004603648.1 336323681 10815740 complement(1529098..1529961) 1 NC_015672.1 PFAM: Methylenetetrahydrofolate reductase; TIGRFAM: 5,10-methylenetetrahydrofolate reductase, prokaryotic form; COGs: COG0735 Fe2+/Zn2+ uptake regulation protein; InterPro IPR002481; KEGG: dap:Dacet_1180 ferric uptake regulator, Fur family; PFAM: Ferric-uptake regulator; SPTR: Ferric uptake regulator, Fur family; 5,10-methylenetetrahydrofolate reductase 1529961 10815740 Flexsi_1430 Flexistipes sinusarabici DSM 4947 5,10-methylenetetrahydrofolate reductase YP_004603648.1 1529098 R 717231 CDS YP_004603649.1 336323682 10815741 complement(1530343..1530738) 1 NC_015672.1 PFAM: Ferric uptake regulator family; COGs: COG0753 Catalase; InterPro IPR018028:IPR010582; KEGG: nhl:Nhal_1142 catalase; PFAM: Catalase related subgroup; Catalase-related immune responsive; PRIAM: Catalase; SPTR: Catalase; Fur family ferric uptake regulator 1530738 10815741 Flexsi_1431 Flexistipes sinusarabici DSM 4947 Fur family ferric uptake regulator YP_004603649.1 1530343 R 717231 CDS YP_004603650.1 336323683 10815742 1531008..1532462 1 NC_015672.1 PFAM: Catalase; Catalase-related immune-responsive; COGs: COG0506 Proline dehydrogenase; InterPro IPR002872; KEGG: ddf:DEFDS_1068 proline dehydrogenase; PFAM: Proline dehydrogenase; PRIAM: Proline dehydrogenase; SPTR: Proline dehydrogenase; catalase 1532462 10815742 Flexsi_1432 Flexistipes sinusarabici DSM 4947 catalase YP_004603650.1 1531008 D 717231 CDS YP_004603651.1 336323684 10815743 complement(1532608..1533519) 1 NC_015672.1 PFAM: Proline dehydrogenase; COGs: COG1012 NAD-dependent aldehyde dehydrogenase; InterPro IPR005931:IPR015590; KEGG: cni:Calni_0885 delta-1-pyrroline-5-carboxylate dehydrogenase; PFAM: Aldehyde dehydrogenase; PRIAM: 1-pyrroline-5-carboxylate dehydrogenase; SPTR: Delta-1-pyrroline-5-carboxylate dehydrogenase; TIGRFAM: Delta-1-pyrroline-5-carboxylate dehydrogenase 1; proline dehydrogenase 1533519 10815743 Flexsi_1433 Flexistipes sinusarabici DSM 4947 proline dehydrogenase YP_004603651.1 1532608 R 717231 CDS YP_004603652.1 336323685 10815744 complement(1533564..1535207) 1 NC_015672.1 PFAM: Aldehyde dehydrogenase family; TIGRFAM: delta-1-pyrroline-5-carboxylate dehydrogenase, group 1; COGs: COG0402 Cytosine deaminase and related metal-dependent hydrolase; HAMAP: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; InterPro IPR006680; KEGG: ddf:DEFDS_1223 N-ethylammeline chlorohydrolase; PFAM: Amidohydrolase 1; PRIAM: S-adenosylhomocysteine deaminase; SPTR: 5-methylthioadenosine/S-adenosylhomocysteine deaminase; delta-1-pyrroline-5-carboxylate dehydrogenase 1535207 10815744 Flexsi_1434 Flexistipes sinusarabici DSM 4947 delta-1-pyrroline-5-carboxylate dehydrogenase YP_004603652.1 1533564 R 717231 CDS YP_004603653.1 336323686 10815745 1535895..1537181 1 NC_015672.1 PFAM: Amidohydrolase family; InterPro IPR008815; KEGG: sun:SUN_0718 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; 5-methylthioadenosine/S-adenosylhomocysteine deaminase 1537181 10815745 Flexsi_1435 Flexistipes sinusarabici DSM 4947 5-methylthioadenosine/S-adenosylhomocysteine deaminase YP_004603653.1 1535895 D 717231 CDS YP_004603654.1 336323687 10815746 1537236..1537583 1 NC_015672.1 PFAM: S23 ribosomal protein; COGs: COG0015 Adenylosuccinate lyase; InterPro IPR004769:IPR000362:IPR019468; KEGG: ddf:DEFDS_1224 adenylosuccinate lyase; PFAM: Adenylosuccinate lyase, C-terminal; Fumarate lyase; PRIAM: Adenylosuccinate lyase; SPTR: Adenylosuccinate lyase; TIGRFAM: Adenylosuccinate lyase; S23 ribosomal protein 1537583 10815746 Flexsi_1436 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004603654.1 1537236 D 717231 CDS YP_004603655.1 336323688 10815747 1537669..1539105 1 NC_015672.1 PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; COGs: COG0698 Ribose 5-phosphate isomerase RpiB; InterPro IPR003500:IPR004785; KEGG: ddf:DEFDS_0484 ribose 5-phosphate isomerase B; PFAM: Ribose/galactose isomerase; PRIAM: Ribose-5-phosphate isomerase; SPTR: Ribose 5-phosphate isomerase B; TIGRFAM: Ribose/galactose isomerase; Ribose 5-phosphate isomerase B; adenylosuccinate lyase 1539105 10815747 Flexsi_1437 Flexistipes sinusarabici DSM 4947 adenylosuccinate lyase YP_004603655.1 1537669 D 717231 CDS YP_004603656.1 336323689 10815748 1539335..1539826 1 NC_015672.1 PFAM: Ribose/Galactose Isomerase; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerases, RpiB/LacA/LacB family; COGs: COG0112 Glycine/serine hydroxymethyltransferase; InterPro IPR001085; KEGG: ddf:DEFDS_0485 glycine hydroxymethyltransferase; PFAM: Serine hydroxymethyltransferase; PRIAM: Glycine hydroxymethyltransferase; SPTR: Serine hydroxymethyltransferase; RpiB/LacA/LacB family sugar-phosphate isomerase 1539826 10815748 Flexsi_1438 Flexistipes sinusarabici DSM 4947 RpiB/LacA/LacB family sugar-phosphate isomerase YP_004603656.1 1539335 D 717231 CDS YP_004603657.1 336323690 10815749 1539826..1541082 1 NC_015672.1 PFAM: Serine hydroxymethyltransferase; COGs: COG2131 Deoxycytidylate deaminase; InterPro IPR002125; KEGG: ddf:DEFDS_0486 CMP/dCMP deaminase zinc-binding protein; PFAM: CMP/dCMP deaminase, zinc-binding; SPTR: CMP/dCMP deaminase, zinc-binding protein; glycine hydroxymethyltransferase 1541082 10815749 Flexsi_1439 Flexistipes sinusarabici DSM 4947 glycine hydroxymethyltransferase YP_004603657.1 1539826 D 717231 CDS YP_004603658.1 336323691 10815750 1541079..1541528 1 NC_015672.1 PFAM: Cytidine and deoxycytidylate deaminase zinc-binding region; COGs: COG4656 NADH:ubiquinone oxidoreductase subunit RnfC; HAMAP: Electron transport complex protein rnfC; InterPro IPR010208:IPR011538:IPR019554:IPR001450; KEGG: cni:Calni_0590 electron transport complex, rnfabcdge type, C subunit; PFAM: NADH:ubiquinone oxidoreductase, 51kDa subunit; Soluble ligand binding domain; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Electron transport complex, RnfABCDGE type, C subunit; TIGRFAM: Electron transport complex, RnfC; CMP/dCMP deaminase zinc-binding protein 1541528 10815750 Flexsi_1440 Flexistipes sinusarabici DSM 4947 CMP/dCMP deaminase zinc-binding protein YP_004603658.1 1541079 D 717231 CDS YP_004603659.1 336323692 10815751 1541543..1542841 1 NC_015672.1 PFAM: Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; TIGRFAM: electron transport complex, RnfABCDGE type, C subunit; COGs: COG4658 NADH:ubiquinone oxidoreductase subunit RnfD; InterPro IPR011303:IPR004338; KEGG: ddf:DEFDS_0488 electron transport complex protein RnfD; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: Electron transport complex protein RnfD; TIGRFAM: Electron transport complex, RnfD; electron transport complex protein RnfC 1542841 10815751 Flexsi_1441 Flexistipes sinusarabici DSM 4947 electron transport complex protein RnfC YP_004603659.1 1541543 D 717231 CDS YP_004603660.1 336323693 10815752 1542838..1543830 1 NC_015672.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: electron transport complex, RnfABCDGE type, D subunit; COGs: COG4659 NADH:ubiquinone oxidoreductase subunit RnfG; InterPro IPR010209:IPR007329; KEGG: ddf:DEFDS_0489 electron transport complex protein RnfG; PFAM: FMN-binding; SPTR: Electron transport complex protein RnfG; TIGRFAM: Electron transport complex, RnfG; RnfABCDGE type electron transport complex subunit D 1543830 10815752 Flexsi_1442 Flexistipes sinusarabici DSM 4947 RnfABCDGE type electron transport complex subunit D YP_004603660.1 1542838 D 717231 CDS YP_004603661.1 336323694 10815753 1543827..1544390 1 NC_015672.1 PFAM: FMN-binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, G subunit; COGs: COG4660 NADH:ubiquinone oxidoreductase subunit RnfE; InterPro IPR010968:IPR003667; KEGG: ddf:DEFDS_0490 electron transport complex protein RnfE; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex protein RnfE; TIGRFAM: Electron transport complex, RnfE; RnfABCDGE type electron transport complex subunit G 1544390 10815753 Flexsi_1443 Flexistipes sinusarabici DSM 4947 RnfABCDGE type electron transport complex subunit G YP_004603661.1 1543827 D 717231 CDS YP_004603662.1 336323695 10815754 1544380..1545012 1 NC_015672.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, E subunit; COGs: COG4657 NADH:ubiquinone oxidoreductase subunit RnfA; InterPro IPR011293:IPR003667; KEGG: ddf:DEFDS_0491 electron transport complex protein RnfA; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Electron transport complex protein RnfA; TIGRFAM: Electron transport complex, RnfA; RnfABCDGE type electron transport complex subunit E 1545012 10815754 Flexsi_1444 Flexistipes sinusarabici DSM 4947 RnfABCDGE type electron transport complex subunit E YP_004603662.1 1544380 D 717231 CDS YP_004603663.1 336323696 10815755 1545036..1545614 1 NC_015672.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: electron transport complex, RnfABCDGE type, A subunit; COGs: COG2878 NADH:ubiquinone oxidoreductase subunit RnfB; InterPro IPR010207:IPR007202:IPR001450; KEGG: ddf:DEFDS_0492 electron transport complex protein RnfB; PFAM: Putative Fe-S cluster; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Electron transport complex protein RnfB; TIGRFAM: Electron transport complex, RnfB; RnfABCDGE type electron transport complex subunit A 1545614 10815755 Flexsi_1445 Flexistipes sinusarabici DSM 4947 RnfABCDGE type electron transport complex subunit A YP_004603663.1 1545036 D 717231 CDS YP_004603664.1 336323697 10815756 1545649..1546455 1 NC_015672.1 PFAM: Putative Fe-S cluster; 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; COGs: COG0123 Deacetylase including yeast histone deacetylase and acetoin utilization protein; InterPro IPR000286; KEGG: ddf:DEFDS_0493 acetoin utilization protein AcuC; PFAM: Histone deacetylase superfamily; SPTR: Acetoin utilization protein AcuC; RnfABCDGE type electron transport complex subunit B 1546455 10815756 Flexsi_1446 Flexistipes sinusarabici DSM 4947 RnfABCDGE type electron transport complex subunit B YP_004603664.1 1545649 D 717231 CDS YP_004603665.1 336323698 10815757 1546459..1547466 1 NC_015672.1 PFAM: Histone deacetylase domain; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; histone deacetylase superfamily protein 1547466 10815757 Flexsi_1447 Flexistipes sinusarabici DSM 4947 histone deacetylase superfamily protein YP_004603665.1 1546459 D 717231 CDS YP_004603666.1 336323699 10815758 complement(1547542..1548555) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0281 Malic enzyme; InterPro IPR012301:IPR012302:IPR002505; KEGG: ddf:DEFDS_1074 malate dehydrogenase (oxaloacetate-decarboxylating) (NADP+); PFAM: Malic enzyme, NAD-binding; Malic enzyme, N-terminal; Phosphate acetyl/butaryl transferase; PRIAM: Malate dehydrogenase (oxaloacetate-decarboxylating) (NADP(+)); SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating) (NADP+); transposase IS116/IS110/IS902 family protein 1548555 10815758 Flexsi_1448 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004603666.1 1547542 R 717231 CDS YP_004603667.1 336323700 10815759 1549588..1551888 1 NC_015672.1 PFAM: Malic enzyme, NAD binding domain; Phosphate acetyl/butaryl transferase; Malic enzyme, N-terminal domain; TIGRFAM: phosphate acetyltransferase; COGs: COG2165 Type II secretory pathway pseudopilin PulG; InterPro IPR012902:IPR010054:IPR013545; KEGG: ddf:DEFDS_1311 general secretion pathway protein G; PFAM: Type II secretion system protein G; Prepilin-type cleavage/methylation, N-terminal; SPTR: General secretion pathway protein G; TIGRFAM: General secretion pathway protein G; Prepilin-type cleavage/methylation, N-terminal; malate dehydrogenase 1551888 10815759 Flexsi_1449 Flexistipes sinusarabici DSM 4947 malate dehydrogenase YP_004603667.1 1549588 D 717231 CDS YP_004603668.1 336323701 10815760 1552299..1552745 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; Bacterial type II secretion system protein G; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: dap:Dacet_0486 hypothetical protein; SPTR: Putative uncharacterized protein; general secretion pathway protein G 1552745 10815760 Flexsi_1450 Flexistipes sinusarabici DSM 4947 general secretion pathway protein G YP_004603668.1 1552299 D 717231 CDS YP_004603669.1 336323702 10815761 1552714..1553190 1 NC_015672.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: ddf:DEFDS_1313 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1553190 10815761 Flexsi_1451 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603669.1 1552714 D 717231 CDS YP_004603670.1 336323703 10815762 1553180..1553518 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR012902; KEGG: dap:Dacet_0484 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1553518 10815762 Flexsi_1452 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603670.1 1553180 D 717231 CDS YP_004603671.1 336323704 10815763 1553505..1554023 1 NC_015672.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; KEGG: dap:Dacet_0483 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1554023 10815763 Flexsi_1453 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603671.1 1553505 D 717231 CDS YP_004603672.1 336323705 10815764 1554013..1554954 1 NC_015672.1 PFAM: General secretion pathway protein K; KEGG: ddf:DEFDS_1316 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1554954 10815764 Flexsi_1454 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603672.1 1554013 D 717231 CDS YP_004603673.1 336323706 10815765 1555011..1556024 1 NC_015672.1 KEGG: ddf:DEFDS_1317 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1556024 10815765 Flexsi_1455 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603673.1 1555011 D 717231 CDS YP_004603674.1 336323707 10815766 1556021..1556497 1 NC_015672.1 KEGG: ddf:DEFDS_1318 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1556497 10815766 Flexsi_1456 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603674.1 1556021 D 717231 CDS YP_004603675.1 336323708 10815767 1556497..1557228 1 NC_015672.1 KEGG: ddf:DEFDS_1319 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1557228 10815767 Flexsi_1457 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603675.1 1556497 D 717231 CDS YP_004603676.1 336323709 10815768 complement(1557369..1558700) 1 NC_015672.1 COGs: COG1971 membrane protein; HAMAP: UPF0059 membrane protein yebN; InterPro IPR003810; KEGG: cni:Calni_1186 hypothetical protein; PFAM: Protein of unknown function DUF204; SPTR: UPF0059 membrane protein Calni_1186; hypothetical protein 1558700 10815768 Flexsi_1458 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603676.1 1557369 R 717231 CDS YP_004603677.1 336323710 10815769 1559110..1559655 1 NC_015672.1 PFAM: Domain of unknown function DUF; COGs: COG1427 periplasmic solute-binding protein; InterPro IPR003773; KEGG: ddf:DEFDS_1279 hypothetical protein; PFAM: Protein of unknown function DUF178; SPTR: Putative uncharacterized protein; hypothetical protein 1559655 10815769 Flexsi_1459 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603677.1 1559110 D 717231 CDS YP_004603678.1 336323711 10815770 1559658..1560434 1 NC_015672.1 PFAM: Putative periplasminc binding protein (DUF178); COGs: COG0668 Small-conductance mechanosensitive channel; InterPro IPR006685; KEGG: ddf:DEFDS_1278 mechanosensitive ion channel, MscS family; PFAM: Mechanosensitive ion channel MscS; SPTR: Mechanosensitive ion channel, MscS family; hypothetical protein 1560434 10815770 Flexsi_1460 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603678.1 1559658 D 717231 CDS YP_004603679.1 336323712 10815771 complement(1560418..1561542) 1 NC_015672.1 PFAM: Mechanosensitive ion channel; KEGG: ddf:DEFDS_1277 hypothetical protein; SPTR: Putative uncharacterized protein; mechanosensitive ion channel MscS 1561542 10815771 Flexsi_1461 Flexistipes sinusarabici DSM 4947 mechanosensitive ion channel MscS YP_004603679.1 1560418 R 717231 CDS YP_004603680.1 336323713 10815772 complement(1561535..1561960) 1 NC_015672.1 PFAM: Stringent starvation protein B; InterPro IPR018392:IPR002482; KEGG: ddf:DEFDS_0822 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; hypothetical protein 1561960 10815772 Flexsi_1462 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603680.1 1561535 R 717231 CDS YP_004603681.1 336323714 10815773 complement(1562047..1562883) 1 NC_015672.1 PFAM: LysM domain; COGs: COG0173 Aspartyl-tRNA synthetase; InterPro IPR004524:IPR004365:IPR004364:IPR004115; KEGG: cni:Calni_0871 aspartyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (D/K/N); Nucleic acid binding, OB-fold, tRNA/helicase-type; GAD domain; PRIAM: Aspartate--tRNA ligase; SPTR: Aspartyl-tRNA synthetase; TIGRFAM: Aspartyl-tRNA synthetase, class IIb, bacterial/mitochondrial type; peptidoglycan-binding lysin domain-containing protein 1562883 10815773 Flexsi_1463 Flexistipes sinusarabici DSM 4947 peptidoglycan-binding lysin domain-containing protein YP_004603681.1 1562047 R 717231 CDS YP_004603682.1 336323715 10815774 complement(1562956..1564746) 1 NC_015672.1 PFAM: GAD domain; tRNA synthetases class II (D, K and N); OB-fold nucleic acid binding domain; TIGRFAM: aspartyl-tRNA synthetase, bacterial type; COGs: COG0124 Histidyl-tRNA synthetase; HAMAP: Histidyl-tRNA synthetase, class IIa, subgroup; InterPro IPR015807:IPR002314:IPR004154; KEGG: ddf:DEFDS_1553 histidyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Anticodon-binding; PRIAM: Histidine--tRNA ligase; SPTR: Histidyl-tRNA synthetase; TIGRFAM: Histidyl-tRNA synthetase, class IIa, subgroup; aspartyl-tRNA synthetase 1564746 10815774 Flexsi_1464 Flexistipes sinusarabici DSM 4947 aspartyl-tRNA synthetase YP_004603682.1 1562956 R 717231 CDS YP_004603683.1 336323716 10815775 complement(1564771..1566021) 1 NC_015672.1 PFAM: Anticodon binding domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: histidyl-tRNA synthetase; COGs: COG1661 DNA-binding protein with PD1-like DNA-binding motif; InterPro IPR005175; KEGG: ddf:DEFDS_1554 hypothetical protein; PFAM: Protein of unknown function DUF296; SPTR: Putative uncharacterized protein; histidyl-tRNA synthetase 1566021 10815775 Flexsi_1465 Flexistipes sinusarabici DSM 4947 histidyl-tRNA synthetase YP_004603683.1 1564771 R 717231 CDS YP_004603684.1 336323717 10815776 1566162..1566590 1 NC_015672.1 PFAM: Domain of unknown function (DUF296); COGs: COG1102 Cytidylate kinase; KEGG: cni:Calni_0873 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1566590 10815776 Flexsi_1466 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603684.1 1566162 D 717231 CDS YP_004603685.1 336323718 10815777 complement(1566565..1567275) 1 NC_015672.1 COGs: COG0801 7 8-dihydro-6-hydroxymethylpterin-pyrophosphokinase; InterPro IPR000550; KEGG: dap:Dacet_1438 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; SPTR:2-amino-4-hydroxy-6-hydroxymethyldihydropterid inepyrophosphokinase; TIGRFAM: 7,8-Dihydro-6-hydroxymethylpterin-pyrophosphokinase, HPPK; hypothetical protein 1567275 10815777 Flexsi_1467 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603685.1 1566565 R 717231 CDS YP_004603686.1 336323719 10815778 complement(1567266..1567760) 1 NC_015672.1 PFAM: 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase (HPPK); TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: dap:Dacet_1440 pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 1567760 10815778 Flexsi_1468 Flexistipes sinusarabici DSM 4947 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_004603686.1 1567266 R 717231 CDS YP_004603687.1 336323720 10815779 complement(1567815..1569200) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG0192 S-adenosylmethionine synthetase; HAMAP: S-adenosylmethionine synthase; InterPro IPR002133; KEGG: ddf:DEFDS_1515 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase; PRIAM: Methionine adenosyltransferase; SPTR: S-adenosylmethionine synthase; TIGRFAM: S-adenosylmethionine synthetase; dihydrolipoyl dehydrogenase 1569200 10815779 Flexsi_1469 Flexistipes sinusarabici DSM 4947 dihydrolipoyl dehydrogenase YP_004603687.1 1567815 R 717231 CDS YP_004603688.1 336323721 10815780 complement(1569217..1570371) 1 NC_015672.1 PFAM: S-adenosylmethionine synthetase, C-terminal domain; S-adenosylmethionine synthetase, central domain; S-adenosylmethionine synthetase, N-terminal domain; TIGRFAM: S-adenosylmethionine synthetase; KEGG: ddf:DEFDS_1516 hypothetical protein; SPTR: Putative uncharacterized protein; S-adenosylmethionine synthase 1570371 10815780 Flexsi_1470 Flexistipes sinusarabici DSM 4947 S-adenosylmethionine synthase YP_004603688.1 1569217 R 717231 CDS YP_004603689.1 336323722 10815781 complement(1570435..1570662) 1 NC_015672.1 COGs: COG0456 Acetyltransferase; InterPro IPR006464:IPR000182; KEGG: cni:Calni_0878 ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Ribosomal-protein-alanine acetyltransferase; TIGRFAM: Ribosomal-protein-alanine acetyltransferase; hypothetical protein 1570662 10815781 Flexsi_1471 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603689.1 1570435 R 717231 CDS YP_004603690.1 336323723 10815782 complement(1570613..1571092) 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; TIGRFAM: ribosomal-protein-alanine acetyltransferase; COGs: COG1214 Inactive homolog of metal-dependent protease putative molecular chaperone; InterPro IPR000905; KEGG: dap:Dacet_1445 peptidase M22 glycoprotease; PFAM: Peptidase M22, glycoprotease; SPTR: Peptidase M22 glycoprotease; TIGRFAM: universal protein YeaZ; ribosomal-protein-alanine acetyltransferase 1571092 10815782 Flexsi_1472 Flexistipes sinusarabici DSM 4947 ribosomal-protein-alanine acetyltransferase YP_004603690.1 1570613 R 717231 CDS YP_004603691.1 336323724 10815783 complement(1571082..1571657) 1 NC_015672.1 PFAM: Glycoprotease family; TIGRFAM: universal bacterial protein YeaZ; COGs: COG0756 dUTPase; HAMAP: Deoxyuridine 5'-triphosphate nucleotidohydrolase; InterPro IPR008181:IPR008180; KEGG: cni:Calni_0915 deoxyuridine 5'-triphosphate nucleotidohydrolase; PFAM: DeoxyUTP pyrophosphatase domain; PRIAM: dUTP diphosphatase; SPTR: Deoxyuridine 5'-triphosphate nucleotidohydrolase; TIGRFAM: DeoxyUTP pyrophosphatase domain, subfamily 1; hypothetical protein 1571657 10815783 Flexsi_1473 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603691.1 1571082 R 717231 CDS YP_004603692.1 336323725 10815784 complement(1571696..1572130) 1 NC_015672.1 PFAM: dUTPase; TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase (dut); COGs: COG1185 Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase); HAMAP: Polyribonucleotide nucleotidyltransferase; InterProIPR012162:IPR001247:IPR015847:IPR015848:IPR 018111:IPR003029:IPR004087; KEGG: cni:Calni_1295 polyribonucleotide nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; Polynucleotide phosphorylase, phosphorolytic RNA-binding, bacterial/organelle-type; K Homology, type 1, subgroup; Ribosomal protein S1, RNA binding domain; PRIAM: Polyribonucleotide nucleotidyltransferase; SPTR: Polyribonucleotide nucleotidyltransferase; TIGRFAM: Polyribonucleotide nucleotidyltransferase; deoxyuridine 5'-triphosphate nucleotidohydrolase 1572130 10815784 Flexsi_1474 Flexistipes sinusarabici DSM 4947 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_004603692.1 1571696 R 717231 CDS YP_004603693.1 336323726 10815785 complement(1572167..1574266) 1 NC_015672.1 PFAM: KH domain; S1 RNA binding domain; 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; Polyribonucleotide nucleotidyltransferase, RNA binding domain; TIGRFAM: polyribonucleotide nucleotidyltransferase; COGs: COG0184 Ribosomal protein S15P/S13E; InterPro IPR005290:IPR000589; KEGG: ddf:DEFDS_1521 30S ribosomal protein S15; PFAM: Ribosomal protein S15; SPTR: 30S ribosomal protein S15; TIGRFAM: Ribosomal protein S15, bacterial-type; polyribonucleotide nucleotidyltransferase 1574266 10815785 Flexsi_1475 Flexistipes sinusarabici DSM 4947 polyribonucleotide nucleotidyltransferase YP_004603693.1 1572167 R 717231 CDS YP_004603694.1 336323727 10815786 complement(1574268..1574537) 1 NC_015672.1 PFAM: Ribosomal protein S15; TIGRFAM: ribosomal protein S15, bacterial/organelle; COGs: COG0130 Pseudouridine synthase; HAMAP: tRNA pseudouridine synthase B; InterPro IPR014780:IPR002501; KEGG: ddf:DEFDS_1522 tRNA pseudouridine synthase B; PFAM: Pseudouridine synthase II, TruB, N-terminal; SPTR: tRNA pseudouridine synthase B; TIGRFAM: Pseudouridine synthase II, TruB, N-terminal, bacterial-type; 30S ribosomal protein S15 1574537 10815786 Flexsi_1476 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S15 YP_004603694.1 1574268 R 717231 CDS YP_004603695.1 336323728 10815787 complement(1574614..1575513) 1 NC_015672.1 PFAM: TruB family pseudouridylate synthase (N terminal domain); TIGRFAM: tRNA pseudouridine 55 synthase; COGs: COG0858 Ribosome-binding factor A; HAMAP: Ribosome-binding factor A; InterPro IPR000238; KEGG: cni:Calni_1298 ribosome-binding factor A; PFAM: Ribosome-binding factor A; SPTR: Ribosome-binding factor A; TIGRFAM: Ribosome-binding factor A; tRNA pseudouridine synthase B 1575513 10815787 Flexsi_1477 Flexistipes sinusarabici DSM 4947 tRNA pseudouridine synthase B YP_004603695.1 1574614 R 717231 CDS YP_004603696.1 336323729 10815788 complement(1575497..1575859) 1 NC_015672.1 PFAM: Ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; COGs: COG1550 conserved hypothetical protein; InterPro IPR007546; KEGG: ddf:DEFDS_1524 hypothetical protein; PFAM: Protein of unknown function DUF503; SPTR: Putative uncharacterized protein; ribosome-binding factor A 1575859 10815788 Flexsi_1478 Flexistipes sinusarabici DSM 4947 ribosome-binding factor A YP_004603696.1 1575497 R 717231 CDS YP_004603697.1 336323730 10815789 complement(1575859..1576140) 1 NC_015672.1 PFAM: Protein of unknown function (DUF503); COGs: COG0532 Translation initiation factor 2 (IF-2; GTPase); InterProIPR000178:IPR005225:IPR006847:IPR000795:IPR 004161; KEGG: ddf:DEFDS_1525 translation initiation factor IF-2; PFAM: Protein synthesis factor, GTP-binding; Translation initiation factor IF-2, N-terminal; Translation elongation factor EFTu/EF1A, domain 2; SPTR: Translation initiation factor IF-2; TIGRFAM: Initiation factor 2; Small GTP-binding protein; hypothetical protein 1576140 10815789 Flexsi_1479 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603697.1 1575859 R 717231 CDS YP_004603698.1 336323731 10815790 complement(1576137..1578923) 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Translation-initiation factor 2; Translation initiation factor IF-2, N-terminal region; Elongation factor Tu GTP binding domain; TIGRFAM: small GTP-binding protein domain; translation initiation factor IF-2; InterPro IPR007393; KEGG: ddf:DEFDS_1526 hypothetical protein; PFAM: Protein of unknown function DUF448; SPTR: Putative uncharacterized protein; manually curated; translation initiation factor IF-2 1578923 10815790 Flexsi_1480 Flexistipes sinusarabici DSM 4947 translation initiation factor IF-2 YP_004603698.1 1576137 R 717231 CDS YP_004603699.1 336323732 10815791 complement(1578937..1579512) 1 NC_015672.1 PFAM: Protein of unknown function (DUF448); COGs: COG0195 Transcription elongation factor; InterPro IPR010213:IPR013735:IPR003029:IPR004087; KEGG: ddf:DEFDS_1527 N utilization substance protein A; PFAM: Transcription factor NusA, N-terminal; Ribosomal protein S1, RNA binding domain; SPTR: N utilization substance protein A; TIGRFAM: Transcription termination factor NusA; hypothetical protein 1579512 10815791 Flexsi_1481 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603699.1 1578937 R 717231 CDS YP_004603700.1 336323733 10815792 complement(1579517..1580875) 1 NC_015672.1 PFAM: NusA N-terminal domain; S1 RNA binding domain; TIGRFAM: transcription termination factor NusA; HAMAP: Uncharacterised protein family UPF0090, bacteria; InterPro IPR003728:IPR020790; KEGG: ddf:DEFDS_1528 hypothetical protein; PFAM: Uncharacterised protein family UPF0090; SPTR: Ribosome maturation factor rimP; NusA antitermination factor 1580875 10815792 Flexsi_1482 Flexistipes sinusarabici DSM 4947 NusA antitermination factor YP_004603700.1 1579517 R 717231 CDS YP_004603701.1 336323734 10815793 complement(1580884..1581360) 1 NC_015672.1 PFAM: Uncharacterised BCR, YhbC family COG0779; KEGG: cni:Calni_0995 lipoprotein; SPTR: Putative lipoprotein; ribosome maturation factor rimP 1581360 10815793 Flexsi_1483 Flexistipes sinusarabici DSM 4947 ribosome maturation factor rimP YP_004603701.1 1580884 R 717231 CDS YP_004603702.1 336323735 10815794 complement(1581763..1582437) 1 NC_015672.1 KEGG: cni:Calni_1389 hypothetical protein; SPTR: Putative uncharacterized protein; lipoprotein 1582437 10815794 Flexsi_1484 Flexistipes sinusarabici DSM 4947 lipoprotein YP_004603702.1 1581763 R 717231 CDS YP_004603703.1 336323736 10815795 1582618..1584060 1 NC_015672.1 KEGG: cni:Calni_1388 lipoprotein; SPTR: Putative lipoprotein; hypothetical protein 1584060 10815795 Flexsi_1485 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603703.1 1582618 D 717231 CDS YP_004603704.1 336323737 10815796 1584116..1584694 1 NC_015672.1 COGs: COG0158 Fructose-1 6-bisphosphatase; HAMAP: Fructose-1,6-bisphosphatase; InterPro IPR000146; KEGG: ddf:DEFDS_1408 fructose-bisphosphatase; PFAM: Fructose-1,6-bisphosphatase; PRIAM: Fructose-bisphosphatase; SPTR: Fructose-1,6-bisphosphatase class 1; lipoprotein 1584694 10815796 Flexsi_1486 Flexistipes sinusarabici DSM 4947 lipoprotein YP_004603704.1 1584116 D 717231 CDS YP_004603705.1 336323738 10815797 1585076..1586068 1 NC_015672.1 PFAM: Fructose-1-6-bisphosphatase; COGs: COG0648 Endonuclease IV; HAMAP: Endodeoxyribonuclease IV; InterPro IPR001719:IPR012307; KEGG: ddf:DEFDS_1407 endonuclease IV; PFAM: Xylose isomerase, TIM barrel domain; PRIAM: Deoxyribonuclease IV (phage-T(4)-induced); SMART: Endodeoxyribonuclease IV; SPTR: Probable endonuclease 4; TIGRFAM: Endodeoxyribonuclease IV; fructose-1,6-bisphosphatase class 1 1586068 10815797 Flexsi_1487 Flexistipes sinusarabici DSM 4947 fructose-1,6-bisphosphatase class 1 YP_004603705.1 1585076 D 717231 CDS YP_004603706.1 336323739 10815798 1586072..1586902 1 NC_015672.1 PFAM: Xylose isomerase-like TIM barrel; TIGRFAM: apurinic endonuclease (APN1); COGs: COG1335 Amidase related to nicotinamidase; InterPro IPR000868; KEGG: ddf:DEFDS_1406 isochorismatase hydrolase; PFAM: Isochorismatase-like; SPTR: Isochorismatase hydrolase; endonuclease 4 1586902 10815798 Flexsi_1488 Flexistipes sinusarabici DSM 4947 endonuclease 4 YP_004603706.1 1586072 D 717231 CDS YP_004603707.1 336323740 10815799 1586908..1587423 1 NC_015672.1 PFAM: Isochorismatase family; COGs: COG2187 conserved hypothetical protein; KEGG: ddf:DEFDS_1405 hypothetical protein; SPTR: Putative uncharacterized protein; isochorismatase hydrolase 1587423 10815799 Flexsi_1489 Flexistipes sinusarabici DSM 4947 isochorismatase hydrolase YP_004603707.1 1586908 D 717231 CDS YP_004603708.1 336323741 10815800 1587420..1588961 1 NC_015672.1 COGs: COG1234 Metal-dependent hydrolase of the beta-lactamase superfamily III; KEGG: ddf:DEFDS_1404 ribonuclease Z; SPTR: Ribonuclease Z; hypothetical protein 1588961 10815800 Flexsi_1490 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603708.1 1587420 D 717231 CDS YP_004603709.1 336323742 10815801 1588951..1589940 1 NC_015672.1 COGs: COG2195 Di- and tripeptidase; InterPro IPR001160:IPR002933:IPR011650; KEGG: mac:MA2653 aminoacyl-histidine dipeptidase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Xaa-His dipeptidase; SPTR: Aminoacyl-histidine dipeptidase; TIGRFAM: Peptidase M20C, Xaa-His dipeptidase; ribonuclease Z 1589940 10815801 Flexsi_1491 Flexistipes sinusarabici DSM 4947 ribonuclease Z YP_004603709.1 1588951 D 717231 CDS YP_004603710.1 336323743 10815802 complement(1589946..1591334) 1 NC_015672.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: aminoacyl-histidine dipeptidase; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1576 heat shock protein Hsp20; PFAM: Heat shock protein Hsp20; SPTR: Heat shock protein Hsp20; aminoacyl-histidine dipeptidase 1591334 10815802 Flexsi_1492 Flexistipes sinusarabici DSM 4947 aminoacyl-histidine dipeptidase YP_004603710.1 1589946 R 717231 CDS YP_004603711.1 336323744 10815803 1591893..1592348 1 NC_015672.1 PFAM: Hsp20/alpha crystallin family; COGs: COG1502 Phosphatidylserine/phosphatidylglycerophosphate/ cardiolipin synthase; InterPro IPR001736; KEGG: ddf:DEFDS_0515 cardiolipin synthetase; PFAM: Phospholipase D/Transphosphatidylase; SMART: Phospholipase D/Transphosphatidylase; SPTR: Cardiolipin synthetase; heat shock protein Hsp20 1592348 10815803 Flexsi_1493 Flexistipes sinusarabici DSM 4947 heat shock protein Hsp20 YP_004603711.1 1591893 D 717231 CDS YP_004603712.1 336323745 10815804 complement(1592377..1593783) 1 NC_015672.1 PFAM: Phospholipase D Active site motif; COGs: COG1242 Fe-S oxidoreductase; InterPro IPR005911:IPR007197:IPR006638; KEGG: ddf:DEFDS_0514 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP01212; phospholipase D/transphosphatidylase 1593783 10815804 Flexsi_1494 Flexistipes sinusarabici DSM 4947 phospholipase D/transphosphatidylase YP_004603712.1 1592377 R 717231 CDS YP_004603713.1 336323746 10815805 complement(1593780..1594673) 1 NC_015672.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM protein, TIGR01212 family; COGs: COG1565 conserved hypothetical protein; InterPro IPR003788; KEGG: ddf:DEFDS_1262 hypothetical protein; PFAM: Protein of unknown function DUF185; SPTR: Putative uncharacterized protein; hypothetical protein 1594673 10815805 Flexsi_1495 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603713.1 1593780 R 717231 CDS YP_004603714.1 336323747 10815806 complement(1594679..1595809) 1 NC_015672.1 PFAM: Uncharacterized ACR, COG1565; KEGG: ddf:DEFDS_1263 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1595809 10815806 Flexsi_1496 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603714.1 1594679 R 717231 CDS YP_004603715.1 336323748 10815807 complement(1595816..1596568) 1 NC_015672.1 COGs: COG0848 Biopolymer transport protein; InterPro IPR003400; KEGG: ddf:DEFDS_1264 biopolymer transport protein, ExbD/TolR family; PFAM: Biopolymer transport protein ExbD/TolR; SPTR: Biopolymer transport protein, ExbD/TolR family; hypothetical protein 1596568 10815807 Flexsi_1497 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603715.1 1595816 R 717231 CDS YP_004603716.1 336323749 10815808 complement(1596565..1596966) 1 NC_015672.1 PFAM: Biopolymer transport protein ExbD/TolR; COGs: COG0811 Biopolymer transport protein; InterPro IPR002898; KEGG: ddf:DEFDS_1265 biopolymer transport protein, ExbB/TolQ family; PFAM: MotA/TolQ/ExbB proton channel; SPTR: Biopolymer transport protein, ExbB/TolQ family; biopolymer transport protein ExbD/TolR 1596966 10815808 Flexsi_1498 Flexistipes sinusarabici DSM 4947 biopolymer transport protein ExbD/TolR YP_004603716.1 1596565 R 717231 CDS YP_004603717.1 336323750 10815809 complement(1596963..1597574) 1 NC_015672.1 PFAM: MotA/TolQ/ExbB proton channel family; KEGG: cni:Calni_0635 hypothetical protein; SPTR: Putative uncharacterized protein; MotA/TolQ/ExbB proton channel 1597574 10815809 Flexsi_1499 Flexistipes sinusarabici DSM 4947 MotA/TolQ/ExbB proton channel YP_004603717.1 1596963 R 717231 CDS YP_004603718.1 336323751 10815810 complement(1597575..1600250) 1 NC_015672.1 COGs: COG0496 acid phosphatase; HAMAP: Multifunctional protein surE; InterPro IPR002828; KEGG: ddf:DEFDS_1267 stationary-phase survival protein; PFAM: Survival protein SurE-like phosphatase/nucleotidase; SPTR: 5'-nucleotidase surE; TIGRFAM: Survival protein SurE-like phosphatase/nucleotidase; hypothetical protein 1600250 10815810 Flexsi_1500 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603718.1 1597575 R 717231 CDS YP_004603719.1 336323752 10815811 complement(1600387..1601157) 1 NC_015672.1 PFAM: Survival protein SurE; TIGRFAM: 5'/3'-nucleotidase SurE; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099; KEGG: ddf:DEFDS_0705 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: CoA-disulfide reductase; SPTR: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; multifunctional protein surE 1601157 10815811 Flexsi_1501 Flexistipes sinusarabici DSM 4947 multifunctional protein surE YP_004603719.1 1600387 R 717231 CDS YP_004603720.1 336323753 10815812 complement(1601399..1602724) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG1342 DNA-binding protein; HAMAP: UPF0251 protein; InterPro IPR002852; KEGG: ddf:DEFDS_1700 hypothetical protein; PFAM: Uncharacterised protein family UPF0251; SPTR: UPF0251 protein DEFDS_1700; CoA-disulfide reductase 1602724 10815812 Flexsi_1502 Flexistipes sinusarabici DSM 4947 CoA-disulfide reductase YP_004603720.1 1601399 R 717231 CDS YP_004603721.1 336323754 10815813 1603149..1603631 1 NC_015672.1 PFAM: Protein of unknown function DUF134; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311:IPR006963:IPR006656:IPR006657; KEGG: ddf:DEFDS_1699 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; hypothetical protein 1603631 10815813 Flexsi_1503 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603721.1 1603149 D 717231 CDS YP_004603722.1 336323755 10815814 1603835..1606159 1 NC_015672.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_1698 molybdopterin oxidoreductase 4Fe-4S ferredoxin, iron-sulfur binding protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Molybdopterin oxidoreductase, 4Fe-4S ferredoxin, iron-sulfur binding protein; trimethylamine-N-oxide reductase (cytochrome c) 1606159 10815814 Flexsi_1504 Flexistipes sinusarabici DSM 4947 trimethylamine-N-oxide reductase (cytochrome c) YP_004603722.1 1603835 D 717231 CDS YP_004603723.1 336323756 10815815 1606178..1606798 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: ddf:DEFDS_1697 molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoreductase, membrane subunit; 4Fe-4S ferredoxin 1606798 10815815 Flexsi_1505 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603723.1 1606178 D 717231 CDS YP_004603724.1 336323757 10815816 1606808..1607986 1 NC_015672.1 PFAM: Polysulphide reductase, NrfD; COGs: COG1433 conserved hypothetical protein; InterPro IPR003731; KEGG: ddf:DEFDS_1685 iron-molybdenum cofactor-binding protein; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis; SPTR: Iron-molybdenum cofactor-binding protein; polysulfide reductase NrfD 1607986 10815816 Flexsi_1506 Flexistipes sinusarabici DSM 4947 polysulfide reductase NrfD YP_004603724.1 1606808 D 717231 CDS YP_004603725.1 336323758 10815817 complement(1608022..1608378) 1 NC_015672.1 PFAM: Dinitrogenase iron-molybdenum cofactor; dinitrogenase iron-molybdenum cofactor biosynthesis protein 1608378 10815817 Flexsi_1507 Flexistipes sinusarabici DSM 4947 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004603725.1 1608022 R 717231 CDS YP_004603726.1 336323759 10815818 complement(1608353..1608562) 1 NC_015672.1 COGs: COG1342 DNA-binding protein; HAMAP: UPF0251 protein; InterPro IPR002852; KEGG: ddf:DEFDS_1690 hypothetical protein; PFAM: Uncharacterised protein family UPF0251; SPTR: UPF0251 protein DEFDS_1690; hypothetical protein 1608562 10815818 Flexsi_1508 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603726.1 1608353 R 717231 CDS YP_004603727.1 336323760 10815819 complement(1608573..1608941) 1 NC_015672.1 PFAM: Protein of unknown function DUF134; COGs: COG5557 Polysulphide reductase; InterPro IPR005614; KEGG: ddf:DEFDS_1691 molybdopterin oxidoreductase membrane subunit; PFAM: Polysulphide reductase, NrfD; SPTR: Molybdopterin oxidoreductase, membrane subunit; hypothetical protein 1608941 10815819 Flexsi_1509 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603727.1 1608573 R 717231 CDS YP_004603728.1 336323761 10815820 complement(1609036..1610223) 1 NC_015672.1 PFAM: Polysulphide reductase, NrfD; COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: ddf:DEFDS_1692 molybdopterin oxidoreductase 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Molybdopterin oxidoreductase, 4Fe-4S ferredoxin; polysulfide reductase NrfD 1610223 10815820 Flexsi_1510 Flexistipes sinusarabici DSM 4947 polysulfide reductase NrfD YP_004603728.1 1609036 R 717231 CDS YP_004603729.1 336323762 10815821 complement(1610239..1610790) 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311:IPR006963:IPR006656:IPR006657; KEGG: ddf:DEFDS_1693 molybdopterin oxidoreductase molybdopterin-binding subunit; PFAM: Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; Molydopterin dinucleotide-binding region; PRIAM: Nitrate reductase; SPTR: Molybdopterin oxidoreductase, molybdopterin-binding subunit; 4Fe-4S ferredoxin 1610790 10815821 Flexsi_1511 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004603729.1 1610239 R 717231 CDS YP_004603730.1 336323763 10815822 complement(1610802..1613132) 1 NC_015672.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; nitrate reductase 1613132 10815822 Flexsi_1512 Flexistipes sinusarabici DSM 4947 nitrate reductase YP_004603730.1 1610802 R 717231 CDS YP_004603731.1 336323764 10815823 complement(1613815..1614864) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG1533 DNA repair photolyase; KEGG: ddf:DEFDS_1338 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1614864 10815823 Flexsi_1513 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603731.1 1613815 R 717231 CDS YP_004603732.1 336323765 10815824 complement(1615023..1616051) 1 NC_015672.1 KEGG: dap:Dacet_2224 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1616051 10815824 Flexsi_1514 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603732.1 1615023 R 717231 CDS YP_004603733.1 336323766 10815825 complement(1616038..1616904) 1 NC_015672.1 COGs: COG0552 Signal recognition particle GTPase; InterPro IPR004390:IPR013822:IPR000897:IPR003593; KEGG: ddf:DEFDS_1340 signal recognition particle receptor FtsY; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle receptor FtsY; TIGRFAM: Cell division transporter substrate-binding protein FtsY; hypothetical protein 1616904 10815825 Flexsi_1515 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603733.1 1616038 R 717231 CDS YP_004603734.1 336323767 10815826 complement(1616861..1618057) 1 NC_015672.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; TIGRFAM: signal recognition particle-docking protein FtsY; COGs: COG1196 Chromosome segregation ATPase; InterPro IPR011890:IPR003395; KEGG: ddf:DEFDS_1341 chromosome segregation protein SMC; PFAM: RecF/RecN/SMC protein, N-terminal; SPTR: Chromosome segregation protein SMC; TIGRFAM: Chromosome segregation protein SMC; signal recognition particle-docking protein FtsY 1618057 10815826 Flexsi_1516 Flexistipes sinusarabici DSM 4947 signal recognition particle-docking protein FtsY YP_004603734.1 1616861 R 717231 CDS YP_004603735.1 336323768 10815827 complement(1618081..1621494) 1 NC_015672.1 PFAM: RecF/RecN/SMC N terminal domain; COGs: COG1048 Aconitase A; InterPro IPR006249:IPR001030:IPR000573; KEGG: cni:Calni_1064 aconitase; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; Aconitase A/isopropylmalate dehydratase small subunit, swivel; PRIAM: Aconitate hydratase; SPTR: Aconitate hydratase; TIGRFAM: Aconitase/iron regulatory protein 2; chromosome segregation protein SMC 1621494 10815827 Flexsi_1517 Flexistipes sinusarabici DSM 4947 chromosome segregation protein SMC YP_004603735.1 1618081 R 717231 CDS YP_004603736.1 336323769 10815828 complement(1621954..1624680) 1 NC_015672.1 PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase 1; InterPro IPR001623; KEGG: cni:Calni_1269 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein DnaJ domain protein; aconitate hydratase 1 1624680 10815828 Flexsi_1518 Flexistipes sinusarabici DSM 4947 aconitate hydratase 1 YP_004603736.1 1621954 R 717231 CDS YP_004603737.1 336323770 10815829 complement(1624760..1627159) 1 NC_015672.1 PFAM: DnaJ domain; COGs: COG0483 fructose-1 6-bisphosphatase of inositol monophosphatase family; InterPro IPR000760; KEGG: ddf:DEFDS_1499 inositol-phosphate phosphatase; PFAM: Inositol monophosphatase; PRIAM: Inositol-phosphate phosphatase; SPTR: Inositol-phosphate phosphatase; heat shock protein DnaJ domain-containing protein 1627159 10815829 Flexsi_1519 Flexistipes sinusarabici DSM 4947 heat shock protein DnaJ domain-containing protein YP_004603737.1 1624760 R 717231 CDS YP_004603738.1 336323771 10815830 complement(1627167..1627940) 1 NC_015672.1 PFAM: Inositol monophosphatase family; COGs: COG1485 ATPase; InterPro IPR005654; KEGG: cni:Calni_1271 afg1-family atpase; PFAM: ATPase, AFG1-like; SPTR: AFG1-family ATPase; inositol-phosphate phosphatase 1627940 10815830 Flexsi_1520 Flexistipes sinusarabici DSM 4947 inositol-phosphate phosphatase YP_004603738.1 1627167 R 717231 CDS YP_004603739.1 336323772 10815831 complement(1628138..1629211) 1 NC_015672.1 PFAM: AFG1-like ATPase; COGs: COG4866 conserved hypothetical protein; InterPro IPR016732; KEGG: ddf:DEFDS_0806 hypothetical protein; PFAM: Uncharacterised conserved protein UCP018688; SPTR: Putative uncharacterized protein; AFG1 family ATPase 1629211 10815831 Flexsi_1521 Flexistipes sinusarabici DSM 4947 AFG1 family ATPase YP_004603739.1 1628138 R 717231 CDS YP_004603740.1 336323773 10815832 complement(1629576..1630424) 1 NC_015672.1 PFAM: Uncharacterized conserved protein (DUF2156); COGs: COG0534 Na+-driven multidrug efflux pump; InterPro IPR002528; KEGG: ddf:DEFDS_0807 multidrug resistance protein, MATE family; PFAM: Multi antimicrobial extrusion protein MatE; SPTR: Multidrug resistance protein, MATE family; TIGRFAM: Multi antimicrobial extrusion protein MatE; manually curated; hypothetical protein 1630424 10815832 Flexsi_1522 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603740.1 1629576 R 717231 CDS YP_004603741.1 336323774 10815833 complement(1630414..1631745) 1 NC_015672.1 PFAM: MatE; TIGRFAM: putative efflux protein, MATE family; InterPro IPR002541; KEGG: dap:Dacet_2906 cytochrome c assembly protein; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c assembly protein; MATE efflux family protein 1631745 10815833 Flexsi_1523 Flexistipes sinusarabici DSM 4947 MATE efflux family protein YP_004603741.1 1630414 R 717231 CDS YP_004603742.1 336323775 10815834 1631866..1632654 1 NC_015672.1 PFAM: Cytochrome C assembly protein; COGs: COG0373 Glutamyl-tRNA reductase; HAMAP: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; InterPro IPR000343:IPR015895:IPR006151:IPR015896; KEGG: cni:Calni_1982 glutamyl-tRNA reductase; PFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, N-terminal; Quinate/shikimate 5-dehydrogenase/glutamyl-tRNA reductase; Tetrapyrrole biosynthesis, glutamyl-tRNA reductase, C-terminal; SPTR: Glutamyl-tRNA reductase; TIGRFAM: Tetrapyrrole biosynthesis, glutamyl-tRNA reductase; cytochrome c assembly protein 1632654 10815834 Flexsi_1524 Flexistipes sinusarabici DSM 4947 cytochrome c assembly protein YP_004603742.1 1631866 D 717231 CDS YP_004603743.1 336323776 10815835 1632658..1633929 1 NC_015672.1 PFAM: Glutamyl-tRNAGlu reductase, N-terminal domain; Shikimate / quinate 5-dehydrogenase; Glutamyl-tRNAGlu reductase, dimerisation domain; TIGRFAM: glutamyl-tRNA reductase; COGs: COG0181 Porphobilinogen deaminase; HAMAP: Porphobilinogen deaminase; InterPro IPR000860; KEGG: ddf:DEFDS_0810 porphobilinogen deaminase; PFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; SPTR: Porphobilinogen deaminase; TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; glutamyl-tRNA reductase 1633929 10815835 Flexsi_1525 Flexistipes sinusarabici DSM 4947 glutamyl-tRNA reductase YP_004603743.1 1632658 D 717231 CDS YP_004603744.1 336323777 10815836 1633926..1634852 1 NC_015672.1 PFAM: Porphobilinogen deaminase, C-terminal domain; Porphobilinogen deaminase, dipyromethane cofactor binding domain; TIGRFAM: porphobilinogen deaminase; COGs: COG1587 Uroporphyrinogen-III synthase; InterPro IPR003754; KEGG: ddf:DEFDS_0811 uroporphyrinogen-III synthase; PFAM: Tetrapyrrole biosynthesis, uroporphyrinogen III synthase; PRIAM: Uroporphyrinogen-III synthase; SPTR: Uroporphyrinogen-III synthase; porphobilinogen deaminase 1634852 10815836 Flexsi_1526 Flexistipes sinusarabici DSM 4947 porphobilinogen deaminase YP_004603744.1 1633926 D 717231 CDS YP_004603745.1 336323778 10815837 1634806..1635591 1 NC_015672.1 PFAM: Uroporphyrinogen-III synthase HemD; COGs: COG0113 Delta-aminolevulinic acid dehydratase; InterPro IPR001731; KEGG: ddf:DEFDS_0812 porphobilinogen synthase; PFAM: Tetrapyrrole biosynthesis, porphobilinogen synthase; PRIAM: Porphobilinogen synthase; SPTR: Delta-aminolevulinic acid dehydratase; uroporphyrinogen-III synthase 1635591 10815837 Flexsi_1527 Flexistipes sinusarabici DSM 4947 uroporphyrinogen-III synthase YP_004603745.1 1634806 D 717231 CDS YP_004603746.1 336323779 10815838 1635588..1636556 1 NC_015672.1 PFAM: Delta-aminolevulinic acid dehydratase; COGs: COG2607 ATPase (AAA+ superfamily); InterPro IPR008533:IPR003593; KEGG: ddf:DEFDS_0813 hypothetical protein; PFAM: Protein of unknown function DUF815; SMART: ATPase, AAA+ type, core; SPTR: Putative uncharacterized protein; porphobilinogen synthase 1636556 10815838 Flexsi_1528 Flexistipes sinusarabici DSM 4947 porphobilinogen synthase YP_004603746.1 1635588 D 717231 CDS YP_004603747.1 336323780 10815839 1636569..1637333 1 NC_015672.1 PFAM: Protein of unknown function (DUF815); COGs: COG0517 FOG: CBS domain; InterPro IPR000644:IPR002912; KEGG: dvm:DvMF_1585 CBS domain containing protein; PFAM: Cystathionine beta-synthase, core; Amino acid-binding ACT; SMART: Cystathionine beta-synthase, core; SPTR: CBS domain containing protein; hypothetical protein 1637333 10815839 Flexsi_1529 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603747.1 1636569 D 717231 CDS YP_004603748.1 336323781 10815840 complement(1637323..1637967) 1 NC_015672.1 PFAM: CBS domain; COGs: COG0410 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: afw:Anae109_1451 ABC transporter related; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related; hypothetical protein 1637967 10815840 Flexsi_1530 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603748.1 1637323 R 717231 CDS YP_004603749.1 336323782 10815841 complement(1637986..1638693) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0411 ABC-type branched-chain amino acid transport systems ATPase component; InterPro IPR003439:IPR003593; KEGG: axy:AXYL_03133 ABC transporter family protein 47; PFAM: ABC transporter-like; PRIAM: Monosaccharide-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter family protein 47; phosphonate-transporting ATPase 1638693 10815841 Flexsi_1531 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004603749.1 1637986 R 717231 CDS YP_004603750.1 336323783 10815842 complement(1638705..1639460) 1 NC_015672.1 PFAM: ABC transporter; Branched-chain amino acid ATP-binding cassette transporter; COGs: COG4177 ABC-type branched-chain amino acid transport system permease component; InterPro IPR001851; KEGG: nha:Nham_3647 inner-membrane translocator; PFAM: Bacterial inner-membrane translocator; SPTR: Inner-membrane translocator; monosaccharide-transporting ATPase 1639460 10815842 Flexsi_1532 Flexistipes sinusarabici DSM 4947 monosaccharide-transporting ATPase YP_004603750.1 1638705 R 717231 CDS YP_004603751.1 336323784 10815843 complement(1639464..1640423) 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0559 Branched-chain amino acid ABC-type transport system permease components; InterPro IPR001851; KEGG: tye:THEYE_A0767 branched-chain amino acid ABC transporter, permease protein; PFAM: Bacterial inner-membrane translocator; SPTR: Branched-chain amino acid ABC transporter, permease protein; ABC transporter 1640423 10815843 Flexsi_1533 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603751.1 1639464 R 717231 CDS YP_004603752.1 336323785 10815844 complement(1640428..1641285) 1 NC_015672.1 PFAM: Branched-chain amino acid transport system / permease component; COGs: COG0683 ABC-type branched-chain amino acid transport systems periplasmic component; InterPro IPR001828; KEGG: bmr:BMI_II1199 branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein, putative; PFAM: Extracellular ligand-binding receptor; SPTR: Putative uncharacterized protein; ABC transporter 1641285 10815844 Flexsi_1534 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603752.1 1640428 R 717231 CDS YP_004603753.1 336323786 10815845 complement(1641353..1642558) 1 NC_015672.1 PFAM: Receptor family ligand binding region; COGs: COG0628 permease; InterPro IPR002549; KEGG: dol:Dole_2006 hypothetical protein; PFAM: Uncharacterised protein family UPF0118; SPTR: Putative uncharacterized protein; extracellular ligand-binding receptor 1642558 10815845 Flexsi_1535 Flexistipes sinusarabici DSM 4947 extracellular ligand-binding receptor YP_004603753.1 1641353 R 717231 CDS YP_004603754.1 336323787 10815846 complement(1642971..1644056) 1 NC_015672.1 PFAM: Domain of unknown function DUF20; COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014189:IPR013154:IPR013149; KEGG: gur:Gura_0180 alcohol dehydrogenase; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; PRIAM: NADPH:quinone reductase; SPTR: Alcohol dehydrogenase, zinc-binding domain protein; TIGRFAM: Quinone oxidoreductase putative, PIG3; hypothetical protein 1644056 10815846 Flexsi_1536 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603754.1 1642971 R 717231 CDS YP_004603755.1 336323788 10815847 1644327..1645316 1 NC_015672.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative NAD(P)H quinone oxidoreductase, PIG3 family; COGs: COG1597 Sphingosine kinase; InterPro IPR001206; KEGG: ddf:DEFDS_1125 hypothetical protein; PFAM: Diacylglycerol kinase, catalytic region; SMART: Diacylglycerol kinase, catalytic region; SPTR: Putative uncharacterized protein; NAD(P)H quinone oxidoreductase 1645316 10815847 Flexsi_1537 Flexistipes sinusarabici DSM 4947 NAD(P)H quinone oxidoreductase YP_004603755.1 1644327 D 717231 CDS YP_004603756.1 336323789 10815848 complement(1645348..1646196) 1 NC_015672.1 PFAM: Diacylglycerol kinase catalytic domain; KEGG: ddf:DEFDS_1124 hypothetical protein; SPTR: Putative uncharacterized protein; diacylglycerol kinase catalytic subunit 1646196 10815848 Flexsi_1538 Flexistipes sinusarabici DSM 4947 diacylglycerol kinase catalytic subunit YP_004603756.1 1645348 R 717231 CDS YP_004603757.1 336323790 10815849 complement(1646446..1647072) 1 NC_015672.1 COGs: COG2107 periplasmic solute-binding protein; InterPro IPR003794; KEGG: ddf:DEFDS_1123 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1647072 10815849 Flexsi_1539 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603757.1 1646446 R 717231 CDS YP_004603758.1 336323791 10815850 complement(1647079..1647870) 1 NC_015672.1 PFAM: Putative periplasminc binding protein (DUF178); COGs: COG1463 ABC-type transport system involved in resistance to organic solvents periplasmic component; InterPro IPR003399; KEGG: ddf:DEFDS_1121 ABC transporter substrate-binding protein; PFAM: Mammalian cell entry related; SPTR: ABC transporter, substrate-binding protein; hypothetical protein 1647870 10815850 Flexsi_1540 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603758.1 1647079 R 717231 CDS YP_004603759.1 336323792 10815851 complement(1647910..1649481) 1 NC_015672.1 PFAM: mce related protein; TIGRFAM: virulence factor Mce family protein; COGs: COG1127 ABC-type transport system involved in resistance to organic solvents ATPase component; InterPro IPR003439:IPR003593; KEGG: cni:Calni_0909 abc transporter related protein; PFAM: ABC transporter-like; PRIAM: Sulfate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; mammalian cell entry domain-containing protein 1649481 10815851 Flexsi_1541 Flexistipes sinusarabici DSM 4947 mammalian cell entry domain-containing protein YP_004603759.1 1647910 R 717231 CDS YP_004603760.1 336323793 10815852 complement(1649498..1650268) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0767 ABC-type transport system involved in resistance to organic solvents permease component; InterPro IPR003453; KEGG: ddf:DEFDS_1119 ABC transporter permease; PFAM: Protein of unknown function DUF140; SPTR: ABC transporter, permease; TIGRFAM: Protein of unknown function DUF140; sulfate-transporting ATPase 1650268 10815852 Flexsi_1542 Flexistipes sinusarabici DSM 4947 sulfate-transporting ATPase YP_004603760.1 1649498 R 717231 CDS YP_004603761.1 336323794 10815853 complement(1650281..1651051) 1 NC_015672.1 PFAM: Domain of unknown function DUF140; TIGRFAM: conserved hypothetical integral membrane protein; COGs: COG0787 Alanine racemase; HAMAP: Alanine racemase; InterPro IPR000821:IPR001608:IPR011079; KEGG: ddf:DEFDS_1118 alanine racemase; PFAM: Alanine racemase, C-terminal; Alanine racemase, N-terminal; PRIAM: Alanine racemase; SPTR: Alanine racemase; TIGRFAM: Alanine racemase; hypothetical protein 1651051 10815853 Flexsi_1543 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603761.1 1650281 R 717231 CDS YP_004603762.1 336323795 10815854 complement(1651074..1652171) 1 NC_015672.1 PFAM: Alanine racemase, C-terminal domain; Alanine racemase, N-terminal domain; TIGRFAM: alanine racemase; COGs: COG1186 Protein chain release factor B; HAMAP: Peptide chain release factor 2, bacterial; InterPro IPR004374:IPR005139:IPR000352:IPR020853; KEGG: ddf:DEFDS_1117 peptide chain release factor RF-2; PFAM: Class I peptide chain release factor; Peptide chain release factor; SPTR: Peptide chain release factor 2; TIGRFAM: Peptide chain release factor 2; alanine racemase 1652171 10815854 Flexsi_1544 Flexistipes sinusarabici DSM 4947 alanine racemase YP_004603762.1 1651074 R 717231 CDS YP_004603763.1 336323796 10815855 complement(1652161..1653273) 1 NC_015672.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 2; COGs: COG1246 N-acetylglutamate synthase and related acetyltransferase; InterPro IPR000182; KEGG: dap:Dacet_1409 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: GCN5-related N-acetyltransferase; peptide chain release factor 2 1653273 10815855 Flexsi_1545 Flexistipes sinusarabici DSM 4947 peptide chain release factor 2 YP_004603763.1 1652161 R 717231 CDS YP_004603764.1 336323797 10815856 complement(1653320..1653784) 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; KEGG: ddf:DEFDS_1114 hypothetical protein; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 1653784 10815856 Flexsi_1546 Flexistipes sinusarabici DSM 4947 N-acetyltransferase GCN5 YP_004603764.1 1653320 R 717231 CDS YP_004603765.1 336323798 10815857 complement(1653781..1654173) 1 NC_015672.1 InterPro IPR000620; KEGG: cni:Calni_1273 hypothetical protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Putative uncharacterized protein; hypothetical protein 1654173 10815857 Flexsi_1547 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603765.1 1653781 R 717231 CDS YP_004603766.1 336323799 10815858 complement(1654772..1655611) 1 NC_015672.1 PFAM: EamA-like transporter family; COGs: COG0372 Citrate synthase; InterPro IPR002020; KEGG: ddf:DEFDS_0814 citrate synthase; PFAM: Citrate synthase-like; PRIAM: Citrate (Si)-synthase; SPTR: Citrate synthase; hypothetical protein 1655611 10815858 Flexsi_1548 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603766.1 1654772 R 717231 CDS YP_004603767.1 336323800 10815859 1655897..1657204 1 NC_015672.1 PFAM: Citrate synthase; TIGRFAM: citrate (Si)-synthase, eukaryotic; KEGG: ddf:DEFDS_0696 hypothetical protein; SPTR: Putative uncharacterized protein; citrate (Si)-synthase 1657204 10815859 Flexsi_1549 Flexistipes sinusarabici DSM 4947 citrate (Si)-synthase YP_004603767.1 1655897 D 717231 CDS YP_004603768.1 336323801 10815860 complement(1657414..1658220) 1 NC_015672.1 COGs: COG1109 Phosphomannomutase; InterPro IPR005844:IPR005845:IPR005846:IPR005843; KEGG: ddf:DEFDS_0735 phosphomannomutase; PFAM: Alpha-D-phosphohexomutase, alpha/beta/alpha domain II; Alpha-D-phosphohexomutase, alpha/beta/alpha domain I; Alpha-D-phosphohexomutase, alpha/beta/alpha domain III; Alpha-D-phosphohexomutase, C-terminal; SPTR: Phosphomannomutase; hypothetical protein 1658220 10815860 Flexsi_1550 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603768.1 1657414 R 717231 CDS YP_004603769.1 336323802 10815861 1658278..1659708 1 NC_015672.1 PFAM: Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain III; Phosphoglucomutase/phosphomannomutase, C-terminal domain; Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); HAMAP: Phosphoenolpyruvate carboxykinase [ATP]; InterPro IPR001272; KEGG: ddf:DEFDS_1461 phosphoenolpyruvate carboxykinase (ATP); PFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; PRIAM: Phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase [ATP]; TIGRFAM: Phosphoenolpyruvate carboxykinase, ATP-utilising; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II 1659708 10815861 Flexsi_1551 Flexistipes sinusarabici DSM 4947 phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II YP_004603769.1 1658278 D 717231 CDS YP_004603770.1 336323803 10815862 complement(1659836..1661431) 1 NC_015672.1 PFAM: Phosphoenolpyruvate carboxykinase; TIGRFAM: phosphoenolpyruvate carboxykinase (ATP); InterPro IPR003615:IPR002711; KEGG: cni:Calni_0828 hnh endonuclease; PFAM: HNH endonuclease; SMART: HNH nuclease; SPTR: HNH endonuclease; phosphoenolpyruvate carboxykinase (ATP) 1661431 10815862 Flexsi_1552 Flexistipes sinusarabici DSM 4947 phosphoenolpyruvate carboxykinase (ATP) YP_004603770.1 1659836 R 717231 CDS YP_004603771.1 336323804 10815863 1661494..1661811 1 NC_015672.1 PFAM: HNH endonuclease; COGs: COG0013 Alanyl-tRNA synthetase; InterPro IPR018164:IPR012947:IPR003156:IPR002318; KEGG: ddf:DEFDS_1463 alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc, N-terminal; Threonyl/alanyl tRNA synthetase, SAD; Phosphoesterase, DHHA1; SPTR: Alanyl-tRNA synthetase; TIGRFAM: Alanyl-tRNA synthetase, class IIc; HNH endonuclease 1661811 10815863 Flexsi_1553 Flexistipes sinusarabici DSM 4947 HNH endonuclease YP_004603771.1 1661494 D 717231 CDS YP_004603772.1 336323805 10815864 1661811..1664429 1 NC_015672.1 PFAM: DHHA1 domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetases class II (A); TIGRFAM: alanine--tRNA ligase; KEGG: ddf:DEFDS_1923 hypothetical protein; SPTR: Putative uncharacterized protein; alanyl-tRNA synthetase 1664429 10815864 Flexsi_1554 Flexistipes sinusarabici DSM 4947 alanyl-tRNA synthetase YP_004603772.1 1661811 D 717231 CDS YP_004603773.1 336323806 10815865 1664446..1664814 1 NC_015672.1 PFAM: Poly(hydroxyalcanoate) granule associated protein (phasin); TIGRFAM: poly(hydroxyalkanoate) granule-associated protein; InterPro IPR000086; KEGG: ddf:DEFDS_1922 NUDIX hydrolase; PFAM: NUDIX hydrolase domain; SPTR: NUDIX hydrolase; hypothetical protein 1664814 10815865 Flexsi_1555 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603773.1 1664446 D 717231 CDS YP_004603774.1 336323807 10815866 1664789..1665430 1 NC_015672.1 PFAM: NUDIX domain; COGs: COG2902 NAD-specific glutamate dehydrogenase; InterPro IPR007780; KEGG: ddf:DEFDS_1921 NAD-glutamate dehydrogenase; PFAM: Bacterial NAD-glutamate dehydrogenase; SPTR: NAD-glutamate dehydrogenase; NUDIX hydrolase 1665430 10815866 Flexsi_1556 Flexistipes sinusarabici DSM 4947 NUDIX hydrolase YP_004603774.1 1664789 D 717231 CDS YP_004603775.1 336323808 10815867 1665612..1670309 1 NC_015672.1 PFAM: Bacterial NAD-glutamate dehydrogenase; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: ddf:DEFDS_0496 peptidase M16 family; PFAM: Peptidase M16, N-terminal; Peptidase M16, C-terminal; PRIAM: processing peptidase; SPTR: Peptidase, M16 family; NAD-glutamate dehydrogenase 1670309 10815867 Flexsi_1557 Flexistipes sinusarabici DSM 4947 NAD-glutamate dehydrogenase YP_004603775.1 1665612 D 717231 CDS YP_004603776.1 336323809 10815868 1670376..1671611 1 NC_015672.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG3155 Uncharacterized protein involved in an early stage of isoprenoid biosynthesis; InterPro IPR002818; KEGG: ddf:DEFDS_1436 sigma cross-reacting protein 27A; PFAM: ThiJ/PfpI; SPTR: Sigma cross-reacting protein 27A; processing peptidase 1671611 10815868 Flexsi_1558 Flexistipes sinusarabici DSM 4947 processing peptidase YP_004603776.1 1670376 D 717231 CDS YP_004603777.1 336323810 10815869 complement(1671715..1672377) 1 NC_015672.1 PFAM: DJ-1/PfpI family; KEGG: cni:Calni_1011 hypothetical protein; SPTR: Putative uncharacterized protein; ThiJ/PfpI domain-containing protein 1672377 10815869 Flexsi_1559 Flexistipes sinusarabici DSM 4947 ThiJ/PfpI domain-containing protein YP_004603777.1 1671715 R 717231 CDS YP_004603778.1 336323811 10815870 complement(1672789..1673889) 1 NC_015672.1 PFAM: Protein of unknown function, DUF400; KEGG: cni:Calni_1012 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1673889 10815870 Flexsi_1560 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603778.1 1672789 R 717231 CDS YP_004603779.1 336323812 10815871 complement(1673920..1675116) 1 NC_015672.1 PFAM: Curli production assembly/transport component CsgG; COGs: COG1573 Uracil-DNA glycosylase; InterPro IPR005122:IPR005273; KEGG: dap:Dacet_1557 phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase-like; SPTR: Phage SPO1 DNA polymerase-related protein; TIGRFAM: Phage SPO1 DNA polymerase-related protein; hypothetical protein 1675116 10815871 Flexsi_1561 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603779.1 1673920 R 717231 CDS YP_004603780.1 336323813 10815872 complement(1675189..1675857) 1 NC_015672.1 PFAM: Uracil DNA glycosylase superfamily; TIGRFAM: uracil-DNA glycosylase, family 4; COGs: COG0452 Phosphopantothenoylcysteine synthetase/decarboxylase; InterPro IPR003382:IPR007085:IPR005252; KEGG: cni:Calni_1014 phosphopantothenoylcysteine decarboxylase; phosphopantothenate-cysteine ligase; PFAM: Flavoprotein; DNA/pantothenate metabolism flavoprotein, C-terminal; PRIAM: Phosphopantothenate--cysteine ligase; SPTR: Phosphopantothenoylcysteine decarboxylase; Phosphopantothenate-cysteine ligase; TIGRFAM: Bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase; phage SPO1 DNA polymerase-like protein 1675857 10815872 Flexsi_1562 Flexistipes sinusarabici DSM 4947 phage SPO1 DNA polymerase-like protein YP_004603780.1 1675189 R 717231 CDS YP_004603781.1 336323814 10815873 complement(1676058..1677263) 1 NC_015672.1 PFAM: DNA / pantothenate metabolism flavoprotein; Flavoprotein; TIGRFAM: phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic; InterPro IPR006110:IPR003716; KEGG: dap:Dacet_1559 DNA-directed RNA polymerase, omega subunit; PFAM: RNA polymerase Rpb6; SPTR: DNA-directed RNA polymerase, omega subunit; TIGRFAM: DNA-directed RNA polymerase, omega subunit; phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase 1677263 10815873 Flexsi_1563 Flexistipes sinusarabici DSM 4947 phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase YP_004603781.1 1676058 R 717231 CDS YP_004603782.1 336323815 10815874 complement(1677256..1677489) 1 NC_015672.1 PFAM: RNA polymerase Rpb6; TIGRFAM: DNA-directed RNA polymerase, omega subunit; COGs: COG0194 Guanylate kinase; HAMAP: Guanylate kinase, sub-group; InterPro IPR008145:IPR008144:IPR017665; KEGG: cni:Calni_1016 guanylate kinase; PFAM: Guanylate kinase; PRIAM: Guanylate kinase; SMART: Guanylate kinase/L-type calcium channel region; SPTR: Guanylate kinase; TIGRFAM: Guanylate kinase, sub-group; DNA-directed RNA polymerase subunit omega 1677489 10815874 Flexsi_1564 Flexistipes sinusarabici DSM 4947 DNA-directed RNA polymerase subunit omega YP_004603782.1 1677256 R 717231 CDS YP_004603783.1 336323816 10815875 complement(1677490..1678119) 1 NC_015672.1 PFAM: Guanylate kinase; TIGRFAM: guanylate kinase; COGs: COG1561 Uncharacterized stress-induced protein; InterPro IPR013527:IPR013551:IPR005229; KEGG: dap:Dacet_1561 hypothetical protein; PFAM: Domain of unknown function DUF1732; YicC-like, N-terminal; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00255; guanylate kinase 1678119 10815875 Flexsi_1565 Flexistipes sinusarabici DSM 4947 guanylate kinase YP_004603783.1 1677490 R 717231 CDS YP_004603784.1 336323817 10815876 complement(1678112..1678981) 1 NC_015672.1 PFAM: YicC-like family, N-terminal region; Domain of unknown function (DUF1732); TIGRFAM: TIGR00255 family protein; COGs: COG0330 Membrane protease subunits stomatin/prohibitin homologs; InterPro IPR001107; KEGG: ddf:DEFDS_1430 hypothetical protein; PFAM: Band 7 protein; SMART: Band 7 protein; SPTR: Putative uncharacterized protein; hypothetical protein 1678981 10815876 Flexsi_1566 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603784.1 1678112 R 717231 CDS YP_004603785.1 336323818 10815877 1679058..1679843 1 NC_015672.1 PFAM: SPFH domain / Band 7 family; hypothetical protein 1679843 10815877 Flexsi_1567 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603785.1 1679058 D 717231 CDS YP_004603786.1 336323819 10815879 1680581..1682482 1 NC_015672.1 PFAM: SurA N-terminal domain; PPIC-type PPIASE domain; COGs: COG1380 Putative effector of murein hydrolase LrgA; InterPro IPR005538; KEGG: ddf:DEFDS_0562 LrgA family protein; PFAM: LrgA; SPTR: LrgA family protein; PpiC-type peptidyl-prolyl cis-trans isomerase 1682482 10815879 Flexsi_1568 Flexistipes sinusarabici DSM 4947 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004603786.1 1680581 D 717231 CDS YP_004603787.1 336323820 10815880 1682716..1683063 1 NC_015672.1 PFAM: LrgA family; COGs: COG1346 Putative effector of murein hydrolase; InterPro IPR007300:IPR005261; KEGG: ddf:DEFDS_0561 LrgB family protein; PFAM: LrgB-like protein; SPTR: LrgB family protein; TIGRFAM: Conserved hypothetical protein CHP00659; LrgA family protein 1683063 10815880 Flexsi_1569 Flexistipes sinusarabici DSM 4947 LrgA family protein YP_004603787.1 1682716 D 717231 CDS YP_004603788.1 336323821 10815881 1683056..1683748 1 NC_015672.1 PFAM: LrgB-like family; TIGRFAM: TIGR00659 family protein; COGs: COG0564 Pseudouridylate synthase 23S RNA-specific; InterPro IPR006145; KEGG: cni:Calni_0640 pseudouridine synthase; PFAM: Pseudouridine synthase, RsuA and RluB/C/D/E/F; SPTR: Pseudouridine synthase; hypothetical protein 1683748 10815881 Flexsi_1570 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603788.1 1683056 D 717231 CDS YP_004603789.1 336323822 10815882 1683745..1684530 1 NC_015672.1 PFAM: RNA pseudouridylate synthase; COGs: COG0446 NAD(FAD)-dependent dehydrogenase; InterPro IPR013027:IPR004099; KEGG: gem:GM21_2049 pyridine nucleotide-disulphide oxidoreductase dimerisation region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: CoA-disulfide reductase; SPTR: Pyridine nucleotide-disulphide oxidoreductase dimerisation region; pseudouridine synthase 1684530 10815882 Flexsi_1571 Flexistipes sinusarabici DSM 4947 pseudouridine synthase YP_004603789.1 1683745 D 717231 CDS YP_004603790.1 336323823 10815883 1684569..1685900 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: cni:Calni_0845 UspA domain-containing protein; PFAM: UspA; SPTR: UspA domain-containing protein; CoA-disulfide reductase 1685900 10815883 Flexsi_1572 Flexistipes sinusarabici DSM 4947 CoA-disulfide reductase YP_004603790.1 1684569 D 717231 CDS YP_004603791.1 336323824 10815884 1685916..1686359 1 NC_015672.1 PFAM: Universal stress protein family; COGs: COG0019 Diaminopimelate decarboxylase; InterPro IPR000183; KEGG: cni:Calni_0514 diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2; PRIAM: Diaminopimelate decarboxylase; SPTR: Diaminopimelate decarboxylase; UspA domain-containing protein 1686359 10815884 Flexsi_1573 Flexistipes sinusarabici DSM 4947 UspA domain-containing protein YP_004603791.1 1685916 D 717231 CDS YP_004603792.1 336323825 10815885 complement(1686433..1687686) 1 NC_015672.1 PFAM: Pyridoxal-dependent decarboxylase, C-terminal sheet domain; Pyridoxal-dependent decarboxylase, pyridoxal binding domain; TIGRFAM: diaminopimelate decarboxylase; COGs: COG0776 Bacterial nucleoid DNA-binding protein; InterPro IPR000119; KEGG: cni:Calni_1071 histone family protein DNA-binding protein; PFAM: Histone-like bacterial DNA-binding protein; SMART: Histone-like bacterial DNA-binding protein; SPTR: Histone family protein DNA-binding protein; diaminopimelate decarboxylase 1687686 10815885 Flexsi_1574 Flexistipes sinusarabici DSM 4947 diaminopimelate decarboxylase YP_004603792.1 1686433 R 717231 CDS YP_004603793.1 336323826 10815886 complement(1687916..1688188) 1 NC_015672.1 PFAM: Bacterial DNA-binding protein; COGs: COG0554 Glycerol kinase; HAMAP: Glycerol kinase; InterPro IPR018484:IPR018485:IPR005999; KEGG: dsa:Desal_3151 glycerol kinase; PFAM: Carbohydrate kinase, FGGY, N-terminal; Carbohydrate kinase, FGGY, C-terminal; PRIAM: Glycerol kinase; SPTR: Glycerol kinase; TIGRFAM: Glycerol kinase; histone family protein DNA-binding protein 1688188 10815886 Flexsi_1575 Flexistipes sinusarabici DSM 4947 histone family protein DNA-binding protein YP_004603793.1 1687916 R 717231 CDS YP_004603794.1 336323827 10815887 1688463..1689962 1 NC_015672.1 PFAM: FGGY family of carbohydrate kinases, N-terminal domain; FGGY family of carbohydrate kinases, C-terminal domain; TIGRFAM: glycerol kinase; KEGG: hel:HELO_1656 hypothetical protein; SPTR: Putative uncharacterized protein; glycerol kinase 1689962 10815887 Flexsi_1576 Flexistipes sinusarabici DSM 4947 glycerol kinase YP_004603794.1 1688463 D 717231 CDS YP_004603795.1 336323828 10815888 1690199..1690471 1 NC_015672.1 COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR001667:IPR003156:IPR004610; KEGG: cni:Calni_0058 single-stranded-DNA-specific exonuclease RecJ; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: Bacterial RecJ exonuclease; manually curated; hypothetical protein 1690471 10815888 Flexsi_1577 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603795.1 1690199 D 717231 CDS YP_004603796.1 336323829 10815889 1690506..1692134 1 NC_015672.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; single-stranded-DNA-specific exonuclease RecJ 1692134 10815889 Flexsi_1578 Flexistipes sinusarabici DSM 4947 single-stranded-DNA-specific exonuclease RecJ YP_004603796.1 1690506 D 717231 CDS YP_004603797.1 336323830 10815890 complement(1692362..1692910) 1 NC_015672.1 hypothetical protein 1692910 10815890 Flexsi_1579 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603797.1 1692362 R 717231 CDS YP_004603798.1 336323831 10815891 complement(1693820..1694500) 1 NC_015672.1 COGs: COG2378 transcriptional regulator protein; KEGG: ddf:DEFDS_0885 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1694500 10815891 Flexsi_1580 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603798.1 1693820 R 717231 CDS YP_004603799.1 336323832 10815892 complement(1694961..1695875) 1 NC_015672.1 hypothetical protein 1695875 10815892 Flexsi_1581 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603799.1 1694961 R 717231 CDS YP_004603800.1 336323833 10815893 complement(1695893..1696234) 1 NC_015672.1 KEGG: tai:Taci_1486 protein of unknown function DUF262; SPTR: Putative uncharacterized protein; hypothetical protein 1696234 10815893 Flexsi_1582 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603800.1 1695893 R 717231 CDS YP_004603801.1 336323834 10815894 1696328..1696960 1 NC_015672.1 KEGG: ddf:DEFDS_0890 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1696960 10815894 Flexsi_1583 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603801.1 1696328 D 717231 CDS YP_004603802.1 336323835 10815895 complement(1697021..1697518) 1 NC_015672.1 KEGG: pin:Ping_2476 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1697518 10815895 Flexsi_1584 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603802.1 1697021 R 717231 CDS YP_004603803.1 336323836 10815896 complement(1697556..1698053) 1 NC_015672.1 SPTR: Putative uncharacterized protein; hypothetical protein 1698053 10815896 Flexsi_1585 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603803.1 1697556 R 717231 CDS YP_004603804.1 336323837 10815897 complement(1698156..1698422) 1 NC_015672.1 COGs: COG1672 ATPase (AAA+ superfamily); InterPro IPR011579:IPR004256; KEGG: saf:SULAZ_0007 ATPase; SPTR: ATPase; hypothetical protein 1698422 10815897 Flexsi_1586 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603804.1 1698156 R 717231 CDS YP_004603805.1 336323838 10815898 1698625..1700028 1 NC_015672.1 PFAM: Archaeal ATPase; Archaea bacterial proteins of unknown function; COGs: COG3857 ATP-dependent nuclease subunit B; KEGG: nth:Nther_0840 ATP-dependent nuclease subunit B-like protein; SPTR: ATP-dependent nuclease subunit B-like protein; ATPase 1700028 10815898 Flexsi_1587 Flexistipes sinusarabici DSM 4947 ATPase YP_004603805.1 1698625 D 717231 CDS YP_004603806.1 336323839 10815899 1700230..1703247 1 NC_015672.1 COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR000212; KEGG: nth:Nther_0841 UvrD/REP helicase; PFAM: DNA helicase, UvrD/REP type; SPTR: UvrD/REP helicase; ATP-dependent nuclease subunit B-like protein 1703247 10815899 Flexsi_1588 Flexistipes sinusarabici DSM 4947 ATP-dependent nuclease subunit B-like protein YP_004603806.1 1700230 D 717231 CDS YP_004603807.1 336323840 10815900 1703240..1706488 1 NC_015672.1 PFAM: UvrD/REP helicase; InterPro IPR007159; KEGG: aac:Aaci_0601 SpoVT/AbrB domain protein; PFAM: Transcription regulator AbrB/SpoV, predicted; SPTR: Virulence associated protein B; UvrD/REP helicase 1706488 10815900 Flexsi_1589 Flexistipes sinusarabici DSM 4947 UvrD/REP helicase YP_004603807.1 1703240 D 717231 CDS YP_004603808.1 336323841 10815901 1706614..1706841 1 NC_015672.1 PFAM: SpoVT / AbrB like domain; COGs: COG1487 nucleic acid-binding protein contains PIN domain; InterPro IPR002716; KEGG: dap:Dacet_0540 PilT protein domain protein; PFAM: PilT protein, N-terminal; SPTR: Virulence associated protein C; SpoVT/AbrB domain-containing protein 1706841 10815901 Flexsi_1590 Flexistipes sinusarabici DSM 4947 SpoVT/AbrB domain-containing protein YP_004603808.1 1706614 D 717231 CDS YP_004603809.1 336323842 10815902 1706842..1707243 1 NC_015672.1 PFAM: PIN domain; PilT protein domain-containing protein 1707243 10815902 Flexsi_1591 Flexistipes sinusarabici DSM 4947 PilT protein domain-containing protein YP_004603809.1 1706842 D 717231 CDS YP_004603810.1 336323843 10815903 1707265..1707711 1 NC_015672.1 InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 1707711 10815903 Flexsi_1592 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603810.1 1707265 D 717231 CDS YP_004603811.1 336323844 10815904 complement(1707787..1709154) 1 NC_015672.1 PFAM: Transposase domain (DUF772); transposase IS4 family protein 1709154 10815904 Flexsi_1593 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603811.1 1707787 R 717231 CDS YP_004603812.1 336323845 10815905 1710506..1710703 1 NC_015672.1 KEGG: cni:Calni_1608 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1710703 10815905 Flexsi_1594 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603812.1 1710506 D 717231 CDS YP_004603813.1 336323846 10815906 complement(1712961..1713365) 1 NC_015672.1 COGs: COG1604 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR010172; KEGG: sat:SYN_02247 putative cytoplasmic protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein, TM1791; hypothetical protein 1713365 10815906 Flexsi_1595 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603813.1 1712961 R 717231 CDS YP_004603814.1 336323847 10815907 complement(1713352..1714668) 1 NC_015672.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr6; InterPro IPR010160; KEGG: sat:SYN_02248 putative cytoplasmic protein; PFAM: CRISPR-associated protein, TM1791.1; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein, TM1791.1; Cmr6 family CRISPR-associated RAMP protein 1714668 10815907 Flexsi_1596 Flexistipes sinusarabici DSM 4947 Cmr6 family CRISPR-associated RAMP protein YP_004603814.1 1713352 R 717231 CDS YP_004603815.1 336323848 10815908 complement(1714652..1715074) 1 NC_015672.1 PFAM: CRISPR-associated protein (Cas_Cmr5); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr5; COGs: COG1336 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR013410; KEGG: sat:SYN_02249 hypothetical protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical exported protein; TIGRFAM: CRISPR-associated RAMP Cmr4; Cmr5 family CRISPR-associated protein 1715074 10815908 Flexsi_1597 Flexistipes sinusarabici DSM 4947 Cmr5 family CRISPR-associated protein YP_004603815.1 1714652 R 717231 CDS YP_004603816.1 336323849 10815909 complement(1715071..1716024) 1 NC_015672.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr4; COGs: COG1769 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR019117; KEGG: sat:SYN_02250 putative cytoplasmic protein; PFAM: CRISPR-associated protein, Cmr3; SPTR: Hypothetical cytosolic protein; Cmr4 family CRISPR-associated RAMP protein 1716024 10815909 Flexsi_1598 Flexistipes sinusarabici DSM 4947 Cmr4 family CRISPR-associated RAMP protein YP_004603816.1 1715071 R 717231 CDS YP_004603817.1 336323850 10815910 complement(1716040..1716948) 1 NC_015672.1 PFAM: CRISPR-associated protein (Cas_Cmr3); TIGRFAM: CRISPR type III-B/RAMP module-associated protein Cmr3; COGs: COG1353 hydrolase of the HD superfamily (permuted catalytic motifs); InterPro IPR013407; KEGG: sat:SYN_02251 HD superfamily hydrolase; SPTR: Hydrolase of the HD superfamily; TIGRFAM: CRISPR-associated protein Crm2; CRISPR-associated protein, Cmr3 1716948 10815910 Flexsi_1599 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein, Cmr3 YP_004603817.1 1716040 R 717231 CDS YP_004603818.1 336323851 10815911 complement(1716941..1719643) 1 NC_015672.1 PFAM: CRISPR-associated protein; TIGRFAM: CRISPR-associated protein Cas10/Cmr2, subtype III-B; COGs: COG1367 Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily); InterPro IPR005537:IPR007522; KEGG: sat:SYN_02252 putative cytoplasmic protein; PFAM: Protein of unknown function DUF324; SPTR: Hypothetical cytosolic protein; TIGRFAM: CRISPR-associated protein TM1795 family, N-terminal; Crm2 family CRISPR-associated protein 1719643 10815911 Flexsi_1600 Flexistipes sinusarabici DSM 4947 Crm2 family CRISPR-associated protein YP_004603818.1 1716941 R 717231 CDS YP_004603819.1 336323852 10815912 complement(1719634..1720527) 1 NC_015672.1 PFAM: RAMP superfamily; TIGRFAM: CRISPR type III-B/RAMP module RAMP protein Cmr1; InterPro IPR011742:IPR013383; KEGG: ttm:Tthe_2633 CRISPR-associated protein, TM1812 family; PFAM: CRISPR-associated protein, TM1812; SPTR: CRISPR-associated protein, TM1812 family; TIGRFAM: CRISPR-associated protein, TM1812; CRISPR-associated protein DxTHG, conserved site; CRISPR-associated protein TM1795 family protein 1720527 10815912 Flexsi_1601 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein TM1795 family protein YP_004603819.1 1719634 R 717231 CDS YP_004603820.1 336323853 10815913 complement(1720528..1721787) 1 NC_015672.1 PFAM: CRISPR-associated protein (cas_TM1812); TIGRFAM: CRISPR-associated protein, TM1812 family; CRISPR-associated DxTHG motif protein; KEGG: cni:Calni_1615 crispr-associated protein cas6; SPTR: CRISPR-associated protein Cas6; CRISPR-associated protein 1721787 10815913 Flexsi_1602 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein YP_004603820.1 1720528 R 717231 CDS YP_004603821.1 336323854 10815914 complement(1721780..1722691) 1 NC_015672.1 PFAM: Uncharacterized conserved protein (DUF2276); InterPro IPR002059; KEGG: cni:Calni_1600 hypothetical protein; PFAM: Cold-shock protein, DNA-binding; SPTR: Putative uncharacterized protein; crispr-associated protein cas6 1722691 10815914 Flexsi_1603 Flexistipes sinusarabici DSM 4947 crispr-associated protein cas6 YP_004603821.1 1721780 R 717231 CDS YP_004603822.1 336323855 10815915 1722809..1724224 1 NC_015672.1 PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1343 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR003799; KEGG: cni:Calni_1597 crispr-associated protein cas2; SPTR: CRISPR-associated protein Cas2; TIGRFAM: Protein of unknown function DUF196; cold-shock protein 1724224 10815915 Flexsi_1604 Flexistipes sinusarabici DSM 4947 cold-shock protein YP_004603822.1 1722809 D 717231 CDS YP_004603823.1 336323856 10815916 complement(1724225..1724506) 1 NC_015672.1 PFAM: CRISPR associated protein Cas2; TIGRFAM: CRISPR-associated endoribonuclease Cas2; COGs: COG1518 Uncharacterized protein predicted to be involved in DNA repair; InterPro IPR002729; KEGG: cni:Calni_1599 crispr-associated protein cas1; PFAM: CRISPR-associated protein Cas1; SPTR: CRISPR-associated protein Cas1; TIGRFAM: CRISPR-associated protein Cas1; CRISPR-associated protein Cas2 1724506 10815916 Flexsi_1605 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas2 YP_004603823.1 1724225 R 717231 CDS YP_004603824.1 336323857 10815917 complement(1724503..1725513) 1 NC_015672.1 PFAM: CRISPR associated protein Cas1; TIGRFAM: CRISPR-associated endonuclease Cas1; COGs: COG4951 conserved hypothetical protein; KEGG: cni:Calni_1598 DNA primase small subunit; SPTR: DNA primase small subunit; CRISPR-associated protein Cas1 1725513 10815917 Flexsi_1606 Flexistipes sinusarabici DSM 4947 CRISPR-associated protein Cas1 YP_004603824.1 1724503 R 717231 CDS YP_004603825.1 336323858 10815918 complement(1725510..1727267) 1 NC_015672.1 KEGG: cni:Calni_1607 hypothetical protein; SPTR: Putative uncharacterized protein; DNA primase small subunit 1727267 10815918 Flexsi_1607 Flexistipes sinusarabici DSM 4947 DNA primase small subunit YP_004603825.1 1725510 R 717231 CDS YP_004603826.1 336323859 10815919 1727385..1727696 1 NC_015672.1 InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 1727696 10815919 Flexsi_1608 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603826.1 1727385 D 717231 CDS YP_004603827.1 336323860 10815920 complement(1727895..1729214) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 1729214 10815920 Flexsi_1609 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603827.1 1727895 R 717231 CDS YP_004603828.1 336323861 10815921 complement(1729518..1730567) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); KEGG: cni:Calni_1606 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1730567 10815921 Flexsi_1610 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603828.1 1729518 R 717231 CDS YP_004603829.1 336323862 10815922 1730894..1731559 1 NC_015672.1 KEGG: cni:Calni_1605 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1731559 10815922 Flexsi_1611 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603829.1 1730894 D 717231 CDS YP_004603830.1 336323863 10815923 1731549..1732463 1 NC_015672.1 KEGG: cni:Calni_1604 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1732463 10815923 Flexsi_1612 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603830.1 1731549 D 717231 CDS YP_004603831.1 336323864 10815924 1732447..1733964 1 NC_015672.1 InterPro IPR018973; KEGG: dat:HRM2_14650 Dbp; PFAM: Protein of unknown function DUF1998; SPTR: Dbp; hypothetical protein 1733964 10815924 Flexsi_1613 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603831.1 1732447 D 717231 CDS YP_004603832.1 336323865 10815925 complement(1736263..1736760) 1 NC_015672.1 PFAM: Domain of unknown function (DUF1998); manually curated; hypothetical protein 1736760 10815925 Flexsi_1614 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603832.1 1736263 R 717231 CDS YP_004603833.1 336323866 10815927 1738280..1738426 1 NC_015672.1 InterPro IPR002104; KEGG: dap:Dacet_1090 integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Integrase family protein; hypothetical protein 1738426 10815927 Flexsi_1616 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603833.1 1738280 D 717231 CDS YP_004603834.1 336323867 10815928 1738505..1739554 1 NC_015672.1 PFAM: Domain of unknown function (DUF3596); Phage integrase family; integrase family protein 1739554 10815928 Flexsi_1617 Flexistipes sinusarabici DSM 4947 integrase family protein YP_004603834.1 1738505 D 717231 CDS YP_004603835.1 336323868 10815930 1740092..1740520 1 NC_015672.1 PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; hypothetical protein 1740520 10815930 Flexsi_1618 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603835.1 1740092 D 717231 CDS YP_004603836.1 336323869 10815932 1741079..1741774 1 NC_015672.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: dal:Dalk_4290 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1741774 10815932 Flexsi_1619 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603836.1 1741079 D 717231 CDS YP_004603837.1 336323870 10815933 complement(1741806..1742840) 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: dal:Dalk_2552 transposase IS4 family protein; SPTR: Transposase IS4 family protein; transposase IS4 family protein 1742840 10815933 Flexsi_1620 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603837.1 1741806 R 717231 CDS YP_004603838.1 336323871 10815934 complement(1742837..1743640) 1 NC_015672.1 InterPro IPR007712:IPR012753; KEGG: ana:asl4561 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Putative uncharacterized protein; TIGRFAM: Addiction module toxin, RelE/StbE; transposase IS4 family protein 1743640 10815934 Flexsi_1621 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603838.1 1742837 R 717231 CDS YP_004603839.1 336323872 10815935 complement(1744577..1744837) 1 NC_015672.1 PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family; RelE/StbE family addiction module toxin 1744837 10815935 Flexsi_1622 Flexistipes sinusarabici DSM 4947 RelE/StbE family addiction module toxin YP_004603839.1 1744577 R 717231 CDS YP_004603840.1 336323873 10815936 complement(1744830..1745030) 1 NC_015672.1 COGs: COG4974 Site-specific recombinase XerD; InterPro IPR002104; KEGG: ppd:Ppro_1126 phage integrase family protein; PFAM: Integrase, catalytic core, phage; SPTR: Phage integrase family protein; hypothetical protein 1745030 10815936 Flexsi_1623 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603840.1 1744830 R 717231 CDS YP_004603841.1 336323874 10815937 complement(1745167..1746318) 1 NC_015672.1 PFAM: Phage integrase family; COGs: COG1995 Pyridoxal phosphate biosynthesis protein; HAMAP: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; InterPro IPR005255; KEGG: cni:Calni_0772 4-hydroxythreonine-4-phosphate dehydrogenase; PFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; PRIAM: 4-hydroxythreonine-4-phosphate dehydrogenase; SPTR: 4-hydroxythreonine-4-phosphate dehydrogenase; TIGRFAM: Pyridoxal phosphate (active vitamin B6) biosynthesis PdxA; integrase family protein 1746318 10815937 Flexsi_1624 Flexistipes sinusarabici DSM 4947 integrase family protein YP_004603841.1 1745167 R 717231 CDS YP_004603842.1 336323875 10815938 1746600..1747556 1 NC_015672.1 PFAM: Pyridoxal phosphate biosynthetic protein PdxA; TIGRFAM: 4-hydroxythreonine-4-phosphate dehydrogenase; COGs: COG0030 Dimethyladenosine transferase (rRNA methylation); HAMAP: Ribosomal RNA adenine dimethylase; InterPro IPR020598:IPR001737:IPR011530; KEGG: cni:Calni_0771 dimethyladenosine transferase; PFAM: Ribosomal RNA adenine methylase transferase; SMART: Ribosomal RNA adenine methylase transferase, N-terminal; SPTR: Ribosomal RNA small subunit methyltransferase A; TIGRFAM: Ribosomal RNA adenine dimethylase; 4-hydroxythreonine-4-phosphate dehydrogenase 1747556 10815938 Flexsi_1625 Flexistipes sinusarabici DSM 4947 4-hydroxythreonine-4-phosphate dehydrogenase YP_004603842.1 1746600 D 717231 CDS YP_004603843.1 336323876 10815939 1747531..1748337 1 NC_015672.1 PFAM: Ribosomal RNA adenine dimethylase; TIGRFAM: dimethyladenosine transferase; COGs: COG2176 DNA polymerase III alpha subunit (gram-positive type); InterPro IPR006055:IPR013520:IPR006054; KEGG: ddf:DEFDS_1873 hypothetical protein; PFAM: Exonuclease, RNase T/DNA polymerase III; PRIAM: DNA-directed DNA polymerase; SMART: Exonuclease; SPTR: Putative uncharacterized protein; TIGRFAM: DNA polymerase III, epsilon subunit; ribosomal RNA small subunit methyltransferase A 1748337 10815939 Flexsi_1626 Flexistipes sinusarabici DSM 4947 ribosomal RNA small subunit methyltransferase A YP_004603843.1 1747531 D 717231 CDS YP_004603844.1 336323877 10815940 1748318..1748965 1 NC_015672.1 PFAM: Exonuclease; TIGRFAM: exonuclease, DNA polymerase III, epsilon subunit family; COGs: COG4147 symporter; InterPro IPR001734:IPR019900; KEGG: afw:Anae109_3836 SSS family solute/sodium (Na+) symporter; PFAM: Sodium/solute symporter; SPTR: SSS sodium solute transporter superfamily; TIGRFAM: Sodium/solute symporter, subgroup; DNA polymerase III subunit epsilon 1748965 10815940 Flexsi_1627 Flexistipes sinusarabici DSM 4947 DNA polymerase III subunit epsilon YP_004603844.1 1748318 D 717231 CDS YP_004603845.1 336323878 10815941 complement(1748996..1750546) 1 NC_015672.1 PFAM: Sodium:solute symporter family; TIGRFAM: transporter, SSS family; COGs: COG3162 membrane protein; InterPro IPR007436; KEGG: dap:Dacet_1118 hypothetical protein; PFAM: Protein of unknown function DUF485; SPTR: Putative uncharacterized protein; sodium solute transporter superfamily protein 1750546 10815941 Flexsi_1628 Flexistipes sinusarabici DSM 4947 sodium solute transporter superfamily protein YP_004603845.1 1748996 R 717231 CDS YP_004603846.1 336323879 10815942 complement(1750561..1750854) 1 NC_015672.1 PFAM: Protein of unknown function, DUF485; COGs: COG2905 signal-transduction protein containing cAMP-binding and CBS domains; InterPro IPR000595:IPR000644:IPR005105:IPR018821; KEGG: cni:Calni_0767 cbs domain and cyclic nucleotide-regulated nucleotidyltransferase; PFAM: Protein of unknown function DUF294, nucleotidyltransferase putative; Cystathionine beta-synthase, core; Cyclic nucleotide-binding; Domain of unknown function DUF294, putative nucleotidyltransferase substrate-binding; SMART: Cyclic nucleotide-binding; Cystathionine beta-synthase, core; SPTR: Putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase; hypothetical protein 1750854 10815942 Flexsi_1629 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603846.1 1750561 R 717231 CDS YP_004603847.1 336323880 10815943 1751272..1753161 1 NC_015672.1 PFAM: Putative nucleotidyltransferase substrate binding domain; CBS domain; Cyclic nucleotide-binding domain; Putative nucleotidyltransferase DUF294; KEGG: dap:Dacet_0906 hypothetical protein; SPTR: Putative uncharacterized protein; putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase 1753161 10815943 Flexsi_1630 Flexistipes sinusarabici DSM 4947 putative CBS domain and cyclic nucleotide-regulated nucleotidyltransferase YP_004603847.1 1751272 D 717231 CDS YP_004603848.1 336323881 10815944 complement(1753303..1753605) 1 NC_015672.1 KEGG: ddf:DEFDS_2030 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1753605 10815944 Flexsi_1631 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603848.1 1753303 R 717231 CDS YP_004603849.1 336323882 10815945 complement(1753697..1754329) 1 NC_015672.1 COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005269; KEGG: cni:Calni_1857 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00730; hypothetical protein 1754329 10815945 Flexsi_1632 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603849.1 1753697 R 717231 CDS YP_004603850.1 336323883 10815946 complement(1754335..1755003) 1 NC_015672.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; TIGR00730 family protein; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterProIPR000014:IPR003661:IPR003594:IPR003660:IPR 013767:IPR013656; KEGG: gur:Gura_2743 PAS/PAC sensor hybrid histidine kinase; PFAM: ATP-binding region, ATPase-like; PAS fold-4; HAMP linker domain; PAS fold; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; PAS; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: PAS/PAC sensor hybrid histidine kinase; TIGRFAM: PAS; hypothetical protein 1755003 10815946 Flexsi_1633 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603850.1 1754335 R 717231 CDS YP_004603851.1 336323884 10815947 complement(1755550..1758414) 1 NC_015672.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; InterPro IPR007487; KEGG: cni:Calni_0192 hypothetical protein; PFAM: ABC transporter substrate binding protein; SPTR: Putative uncharacterized protein; multi-sensor signal transduction histidine kinase 1758414 10815947 Flexsi_1634 Flexistipes sinusarabici DSM 4947 multi-sensor signal transduction histidine kinase YP_004603851.1 1755550 R 717231 CDS YP_004603852.1 336323885 10815948 complement(1758407..1759396) 1 NC_015672.1 PFAM: ABC transporter substrate binding protein; COGs: COG1253 Hemolysins and related protein containing CBS domains; InterPro IPR000644:IPR002550:IPR005170; KEGG: dde:Dde_3036 hypothetical protein; PFAM: Protein of unknown function DUF21; Cystathionine beta-synthase, core; Transporter-associated region; SPTR: CBS protein; ABC transporter substrate binding protein 1759396 10815948 Flexsi_1635 Flexistipes sinusarabici DSM 4947 ABC transporter substrate binding protein YP_004603852.1 1758407 R 717231 CDS YP_004603853.1 336323886 10815949 1759941..1761359 1 NC_015672.1 PFAM: CBS domain; Domain of unknown function DUF21; Transporter associated domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: gbm:Gbem_0270 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SMART: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; hypothetical protein 1761359 10815949 Flexsi_1636 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603853.1 1759941 D 717231 CDS YP_004603854.1 336323887 10815950 1761557..1762696 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3152 membrane protein; InterPro IPR008523; KEGG: cpb:Cphamn1_0612 protein of unknown function DUF805; PFAM: Protein of unknown function DUF805; SPTR: Putative uncharacterized protein; diguanylate cyclase 1762696 10815950 Flexsi_1637 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004603854.1 1761557 D 717231 CDS YP_004603855.1 336323888 10815951 1762730..1763107 1 NC_015672.1 PFAM: Protein of unknown function (DUF805); COGs: COG0412 Dienelactone hydrolase; InterPro IPR002925; KEGG: dap:Dacet_0983 dienelactone hydrolase; PFAM: Dienelactone hydrolase; SPTR: Dienelactone hydrolase; hypothetical protein 1763107 10815951 Flexsi_1638 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603855.1 1762730 D 717231 CDS YP_004603856.1 336323889 10815952 complement(1763104..1763844) 1 NC_015672.1 PFAM: Dienelactone hydrolase family; dienelactone hydrolase 1763844 10815952 Flexsi_1639 Flexistipes sinusarabici DSM 4947 dienelactone hydrolase YP_004603856.1 1763104 R 717231 CDS YP_004603857.1 336323890 10815955 complement(1764340..1765404) 1 NC_015672.1 PFAM: GcpE protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 1765404 10815955 Flexsi_1640 Flexistipes sinusarabici DSM 4947 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_004603857.1 1764340 R 717231 CDS YP_004603858.1 336323891 10815957 1765765..1766613 1 NC_015672.1 PFAM: Ribosomal protein S2; TIGRFAM: ribosomal protein S2, bacterial type; COGs: COG0264 Translation elongation factor Ts; HAMAP: Elongation factor Ts; InterPro IPR000449:IPR014039:IPR001816; KEGG: ddf:DEFDS_0050 translation elongation factor Ts; PFAM: Translation elongation factor EFTs/EF1B, dimerisation; Ubiquitin-associated/translation elongation factor EF1B, N-terminal; SPTR: Elongation factor Ts; TIGRFAM: Translation elongation factor EFTs/EF1B; 30S ribosomal protein S2 1766613 10815957 Flexsi_1641 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S2 YP_004603858.1 1765765 D 717231 CDS YP_004603859.1 336323892 10815958 1766613..1767269 1 NC_015672.1 PFAM: Elongation factor TS; UBA/TS-N domain; TIGRFAM: translation elongation factor Ts; COGs: COG0366 Glycosidase; InterPro IPR006589:IPR006047; KEGG: ddf:DEFDS_0078 sucrose phosphorylase; PFAM: Glycosyl hydrolase, family 13, catalytic region; PRIAM: Sucrose phosphorylase; SMART: Glycosyl hydrolase, family 13, subfamily, catalytic region; SPTR: Sucrose phosphorylase; elongation factor Ts 1767269 10815958 Flexsi_1642 Flexistipes sinusarabici DSM 4947 elongation factor Ts YP_004603859.1 1766613 D 717231 CDS YP_004603860.1 336323893 10815959 complement(1767329..1769179) 1 NC_015672.1 PFAM: Alpha amylase, catalytic domain; COGs: COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor); InterPro IPR002645:IPR003658; KEGG: cni:Calni_0188 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; TIGRFAM: Anti-sigma factor antagonist; sucrose phosphorylase 1769179 10815959 Flexsi_1643 Flexistipes sinusarabici DSM 4947 sucrose phosphorylase YP_004603860.1 1767329 R 717231 CDS YP_004603861.1 336323894 10815960 complement(1769185..1769532) 1 NC_015672.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; anti-sigma-factor antagonist 1769532 10815960 Flexsi_1644 Flexistipes sinusarabici DSM 4947 anti-sigma-factor antagonist YP_004603861.1 1769185 R 717231 CDS YP_004603862.1 336323895 10815962 complement(1770393..1771817) 1 NC_015672.1 PFAM: 2-nitropropane dioxygenase; COGs: COG0265 Trypsin-like serine protease typically periplasmic contain C-terminal PDZ domain; InterPro IPR001478:IPR001254:IPR011782; KEGG: ddf:DEFDS_1060 peptidase S1C, Do; PFAM: Peptidase S1/S6, chymotrypsin/Hap; PDZ/DHR/GLGF; PRIAM: HtrA2 peptidase; SMART: PDZ/DHR/GLGF; SPTR: Peptidase S1C, Do; TIGRFAM: Peptidase S1C, Do; 2-nitropropane dioxygenase 1771817 10815962 Flexsi_1645 Flexistipes sinusarabici DSM 4947 2-nitropropane dioxygenase YP_004603862.1 1770393 R 717231 CDS YP_004603863.1 336323896 10815963 complement(1771987..1773375) 1 NC_015672.1 PFAM: Trypsin; PDZ domain (Also known as DHR or GLGF); TIGRFAM: periplasmic serine protease, Do/DeqQ family; KEGG: cni:Calni_0954 sigma e regulatory protein, MucB/rseb; SPTR: Putative sigma E regulatory protein, MucB/RseB; protease Do 1773375 10815963 Flexsi_1646 Flexistipes sinusarabici DSM 4947 protease Do YP_004603863.1 1771987 R 717231 CDS YP_004603864.1 336323897 10815964 complement(1773359..1774087) 1 NC_015672.1 KEGG: dap:Dacet_1972 putative transmembrane anti-sigma factor; SPTR: Putative transmembrane anti-sigma factor; sigma e regulatory protein, MucB/rseb 1774087 10815964 Flexsi_1647 Flexistipes sinusarabici DSM 4947 sigma e regulatory protein, MucB/rseb YP_004603864.1 1773359 R 717231 CDS YP_004603865.1 336323898 10815965 complement(1774084..1774539) 1 NC_015672.1 COGs: COG1595 DNA-directed RNA polymerase specialized sigma subunit sigma24 homolog; InterPro IPR007627:IPR013249:IPR014284; KEGG: ddf:DEFDS_1057 DNA-directed RNA polymerase sigma 70 factor; PFAM: RNA polymerase sigma factor 70, region 4 type 2; RNA polymerase sigma-70 region 2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; putative transmembrane anti-sigma factor 1774539 10815965 Flexsi_1648 Flexistipes sinusarabici DSM 4947 putative transmembrane anti-sigma factor YP_004603865.1 1774084 R 717231 CDS YP_004603866.1 336323899 10815966 complement(1774517..1775107) 1 NC_015672.1 PFAM: Sigma-70, region 4; Sigma-70 region 2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; ECF subfamily RNA polymerase sigma-24 subunit 1775107 10815966 Flexsi_1649 Flexistipes sinusarabici DSM 4947 ECF subfamily RNA polymerase sigma-24 subunit YP_004603866.1 1774517 R 717231 CDS YP_004603867.1 336323900 10815967 complement(1775208..1776527) 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR003251; KEGG: ddf:DEFDS_0850 hypothetical protein; PFAM: Rubrerythrin; SPTR: Putative uncharacterized protein; transposase IS4 family protein 1776527 10815967 Flexsi_1650 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603867.1 1775208 R 717231 CDS YP_004603868.1 336323901 10815968 complement(1776661..1776900) 1 NC_015672.1 PFAM: Rubrerythrin; manually curated; rubrerythrin 1776900 10815968 Flexsi_1651 Flexistipes sinusarabici DSM 4947 rubrerythrin YP_004603868.1 1776661 R 717231 CDS YP_004603869.1 336323902 10815970 1777876..1778421 1 NC_015672.1 PFAM: Cupin domain; Helix-turn-helix; COGs: COG1773 Rubredoxin; InterPro IPR004039; KEGG: sta:STHERM_c04700 rubredoxin; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Rubredoxin; cupin 1778421 10815970 Flexsi_1653 Flexistipes sinusarabici DSM 4947 cupin YP_004603869.1 1777876 D 717231 CDS YP_004603870.1 336323903 10815971 1778622..1778783 1 NC_015672.1 PFAM: Rubredoxin; COGs: COG0426 flavoprotein; InterPro IPR008254; KEGG: ddf:DEFDS_0572 rubredoxin-oxygen oxidoreductase; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Rubredoxin-oxygen oxidoreductase; rubredoxin-type Fe(Cys)4 protein 1778783 10815971 Flexsi_1654 Flexistipes sinusarabici DSM 4947 rubredoxin-type Fe(Cys)4 protein YP_004603870.1 1778622 D 717231 CDS YP_004603871.1 336323904 10815972 1778837..1780039 1 NC_015672.1 PFAM: Flavodoxin; Metallo-beta-lactamase superfamily; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148:IPR006037; KEGG: ddf:DEFDS_0571 K+ transport (Trk) system NAD-binding component; PFAM: Regulator of K+ conductance, N-terminal; Regulator of K+ conductance, C-terminal; SPTR: K+ transport (Trk) system, NAD-binding component; flavodoxin/nitric oxide synthase 1780039 10815972 Flexsi_1655 Flexistipes sinusarabici DSM 4947 flavodoxin/nitric oxide synthase YP_004603871.1 1778837 D 717231 CDS YP_004603872.1 336323905 10815973 complement(1780075..1780725) 1 NC_015672.1 PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: ddf:DEFDS_0570 K+ transport (Trk) system membrane component; PFAM: Cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: K+ transport (Trk) system, membrane component; TrkA-N domain-containing protein 1780725 10815973 Flexsi_1656 Flexistipes sinusarabici DSM 4947 TrkA-N domain-containing protein YP_004603872.1 1780075 R 717231 CDS YP_004603873.1 336323906 10815974 complement(1780729..1782015) 1 NC_015672.1 PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; InterPro IPR004039; KEGG: dal:Dalk_5026 rubredoxin-type Fe(Cys)4 protein; PFAM: Rubredoxin-type Fe(Cys)4 protein; SPTR: Putative uncharacterized protein; H(+)-transporting two-sector ATPase 1782015 10815974 Flexsi_1657 Flexistipes sinusarabici DSM 4947 H(+)-transporting two-sector ATPase YP_004603873.1 1780729 R 717231 CDS YP_004603874.1 336323907 10815975 complement(1782060..1782170) 1 NC_015672.1 PFAM: Rubredoxin; COGs: COG0694 Thioredoxin-like protein and domains; InterPro IPR001075; KEGG: ddf:DEFDS_1556 nitrogen-fixing NifU domain protein; PFAM: NIF system FeS cluster assembly, NifU, C-terminal; SPTR: Nitrogen-fixing NifU domain protein; rubredoxin-type Fe(Cys)4 protein 1782170 10815975 Flexsi_1658 Flexistipes sinusarabici DSM 4947 rubredoxin-type Fe(Cys)4 protein YP_004603874.1 1782060 R 717231 CDS YP_004603875.1 336323908 10815976 complement(1782180..1782401) 1 NC_015672.1 PFAM: NifU-like domain; COGs: COG0822 NifU homolog involved in Fe-S cluster formation; InterPro IPR002871:IPR017787; KEGG: cni:Calni_1679 fes cluster assembly scaffold protein NifU; PFAM: NIF system FeS cluster assembly, NifU, N-terminal; SPTR: FeS cluster assembly scaffold protein NifU; TIGRFAM: NIF system FeS cluster assembly, NifU-like; nitrogen-fixing NifU domain-containing protein 1782401 10815976 Flexsi_1659 Flexistipes sinusarabici DSM 4947 nitrogen-fixing NifU domain-containing protein YP_004603875.1 1782180 R 717231 CDS YP_004603876.1 336323909 10815977 complement(1782408..1782857) 1 NC_015672.1 PFAM: NifU-like N terminal domain; TIGRFAM: FeS cluster assembly scaffold IscU; FeS cluster assembly scaffold protein NifU, Clostridium type; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ddf:DEFDS_1558 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; FeS cluster assembly scaffold protein NifU 1782857 10815977 Flexsi_1660 Flexistipes sinusarabici DSM 4947 FeS cluster assembly scaffold protein NifU YP_004603876.1 1782408 R 717231 CDS YP_004603877.1 336323910 10815978 complement(1782870..1784051) 1 NC_015672.1 PFAM: Aminotransferase class-V; KEGG: dap:Dacet_1242 hypothetical protein; SPTR: Putative uncharacterized protein; cysteine desulfurase 1784051 10815978 Flexsi_1661 Flexistipes sinusarabici DSM 4947 cysteine desulfurase YP_004603877.1 1782870 R 717231 CDS YP_004603878.1 336323911 10815979 complement(1784069..1784851) 1 NC_015672.1 COGs: COG1426 conserved hypothetical protein; InterPro IPR001387; KEGG: ddf:DEFDS_1560 hypothetical protein; PFAM: Helix-turn-helix type 3; SMART: Helix-turn-helix type 3; SPTR: Putative uncharacterized protein; hypothetical protein 1784851 10815979 Flexsi_1662 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603878.1 1784069 R 717231 CDS YP_004603879.1 336323912 10815980 complement(1784922..1785854) 1 NC_015672.1 PFAM: Helix-turn-helix; COGs: COG3063 Tfp pilus assembly protein PilF; InterPro IPR019734:IPR013105:IPR001440; KEGG: ddf:DEFDS_1561 hypothetical protein; PFAM: Tetratricopeptide TPR-1; Tetratricopeptide TPR2; SMART: Tetratricopeptide repeat; SPTR: Putative uncharacterized protein; XRE family transcriptional regulator 1785854 10815980 Flexsi_1663 Flexistipes sinusarabici DSM 4947 XRE family transcriptional regulator YP_004603879.1 1784922 R 717231 CDS YP_004603880.1 336323913 10815981 complement(1785847..1786593) 1 NC_015672.1 PFAM: Tetratricopeptide repeat; COGs: COG1521 Putative transcriptional regulator protein; HAMAP: Type III pantothenate kinase; InterPro IPR004619; KEGG: cni:Calni_1675 pantothenate kinase; PFAM: Bordetella pertussis Bvg accessory factor; PRIAM: Pantothenate kinase; SPTR: Type III pantothenate kinase; TIGRFAM: Bordetella pertussis Bvg accessory factor; hypothetical protein 1786593 10815981 Flexsi_1664 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603880.1 1785847 R 717231 CDS YP_004603881.1 336323914 10815982 complement(1786574..1787350) 1 NC_015672.1 PFAM: Bordetella pertussis Bvg accessory factor family; TIGRFAM: pantothenate kinase, type III; COGs: COG0340 Biotin-(acetyl-CoA carboxylase) ligase; InterPro IPR004143:IPR003142:IPR004408; KEGG: dap:Dacet_1239 biotin/acetyl-CoA-carboxylase ligase; PFAM: Biotin/lipoate A/B protein ligase; Biotin protein ligase, C-terminal; SPTR: Biotin/acetyl-CoA-carboxylase ligase; TIGRFAM: Biotin--acetyl-CoA-carboxylase ligase; putative Baf family transcriptional acitvator 1787350 10815982 Flexsi_1665 Flexistipes sinusarabici DSM 4947 putative Baf family transcriptional acitvator YP_004603881.1 1786574 R 717231 CDS YP_004603882.1 336323915 10815983 complement(1787334..1788095) 1 NC_015672.1 PFAM: Biotin protein ligase C terminal domain; Biotin/lipoate A/B protein ligase family; TIGRFAM: birA, biotin-[acetyl-CoA-carboxylase] ligase region; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: cni:Calni_1673 response regulator receiver protein; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver protein; biotin--acetyl-CoA-carboxylase ligase 1788095 10815983 Flexsi_1666 Flexistipes sinusarabici DSM 4947 biotin--acetyl-CoA-carboxylase ligase YP_004603882.1 1787334 R 717231 CDS YP_004603883.1 336323916 10815984 complement(1788088..1788435) 1 NC_015672.1 PFAM: Response regulator receiver domain; manually curated; response regulator receiver protein 1788435 10815984 Flexsi_1667 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004603883.1 1788088 R 717231 CDS YP_004603884.1 336323917 10815986 1788713..1788832 1 NC_015672.1 PFAM: Desulfoferrodoxin, N-terminal domain; TIGRFAM: desulfoferrodoxin FeS4 iron-binding domain; COGs: COG0217 conserved hypothetical protein; HAMAP: Protein of unknown function DUF28; InterPro IPR002876; KEGG: ddf:DEFDS_1661 hypothetical protein; PFAM: Protein of unknown function DUF28; SPTR: UPF0082 protein DEFDS_1661; TIGRFAM: Protein of unknown function DUF28; desulfoferrodoxin Dfx domain-containing protein 1788832 10815986 Flexsi_1669 Flexistipes sinusarabici DSM 4947 desulfoferrodoxin Dfx domain-containing protein YP_004603884.1 1788713 D 717231 CDS YP_004603885.1 336323918 10815987 1788982..1789725 1 NC_015672.1 PFAM: Domain of unknown function DUF28; TIGRFAM: DNA-binding regulatory protein, YebC/PmpR family; COGs: COG0817 Holliday junction resolvasome endonuclease subunit; HAMAP: Crossover junction endodeoxyribonuclease RuvC; InterPro IPR002176; KEGG: dap:Dacet_0474 crossover junction endodeoxyribonuclease RuvC; PFAM: Crossover junction endodeoxyribonuclease RuvC; PRIAM: Crossover junction endodeoxyribonuclease; SPTR: Crossover junction endodeoxyribonuclease ruvC; TIGRFAM: Crossover junction endodeoxyribonuclease RuvC; hypothetical protein 1789725 10815987 Flexsi_1670 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603885.1 1788982 D 717231 CDS YP_004603886.1 336323919 10815988 1789728..1790219 1 NC_015672.1 PFAM: Crossover junction endodeoxyribonuclease RuvC; TIGRFAM: crossover junction endodeoxyribonuclease RuvC; COGs: COG0632 Holliday junction resolvasome DNA-binding subunit; HAMAP: Holliday junction ATP-dependent DNA helicase ruvA; InterPro IPR013849:IPR000445:IPR011114:IPR000085; KEGG: dap:Dacet_0475 Holliday junction DNA helicase RuvA; PFAM: DNA helicase, Holliday junction RuvA type, domain I, bacterial; Helix-hairpin-helix motif; DNA helicase, Holliday junction RuvA type, domain III, C-terminal; SPTR: Holliday junction ATP-dependent DNA helicase ruvA; TIGRFAM: Bacterial DNA recombination protein RuvA; Crossover junction endodeoxyribonuclease ruvC 1790219 10815988 Flexsi_1671 Flexistipes sinusarabici DSM 4947 Crossover junction endodeoxyribonuclease ruvC YP_004603886.1 1789728 D 717231 CDS YP_004603887.1 336323920 10815989 1790209..1790781 1 NC_015672.1 PFAM: RuvA, C-terminal domain; RuvA N terminal domain; TIGRFAM: Holliday junction DNA helicase, RuvA subunit; COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ddf:DEFDS_0602 glycosyl transferase; PFAM: Glycosyl transferase, group 1; SPTR: Glycosyl transferase; Holliday junction ATP-dependent DNA helicase ruvA 1790781 10815989 Flexsi_1672 Flexistipes sinusarabici DSM 4947 Holliday junction ATP-dependent DNA helicase ruvA YP_004603887.1 1790209 D 717231 CDS YP_004603888.1 336323921 10815990 complement(1790848..1791909) 1 NC_015672.1 PFAM: Glycosyl transferases group 1; COGs: COG0206 Cell division GTPase; InterPro IPR003008:IPR018316:IPR000158; KEGG: ddf:DEFDS_0601 cell division protein FtsZ; PFAM: Tubulin/FtsZ, GTPase domain; Tubulin/FtsZ, 2-layer sandwich domain; SPTR: Cell division protein ftsZ; TIGRFAM: Cell division protein FtsZ, N-terminal; group 1 glycosyl transferase 1791909 10815990 Flexsi_1673 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004603888.1 1790848 R 717231 CDS YP_004603889.1 336323922 10815991 complement(1791918..1793051) 1 NC_015672.1 PFAM: Tubulin/FtsZ family, GTPase domain; FtsZ family, C-terminal domain; TIGRFAM: cell division protein FtsZ; COGs: COG0849 Actin-like ATPase involved in cell division; InterPro IPR003494:IPR020823; KEGG: ddf:DEFDS_0600 cell division protein FtsA; PFAM: Cell division protein FtsA domain; SPTR: Cell division protein FtsA; TIGRFAM: Cell division protein family FtsA; cell division protein FtsZ 1793051 10815991 Flexsi_1674 Flexistipes sinusarabici DSM 4947 cell division protein FtsZ YP_004603889.1 1791918 R 717231 CDS YP_004603890.1 336323923 10815992 complement(1793072..1794304) 1 NC_015672.1 PFAM: Cell division protein FtsA; TIGRFAM: cell division protein FtsA; InterPro IPR013685; KEGG: dap:Dacet_2198 hypothetical protein; PFAM: Polypeptide-transport-associated, FtsQ-type; SPTR: Putative uncharacterized protein; cell division protein FtsA 1794304 10815992 Flexsi_1675 Flexistipes sinusarabici DSM 4947 cell division protein FtsA YP_004603890.1 1793072 R 717231 CDS YP_004603891.1 336323924 10815993 complement(1794291..1794974) 1 NC_015672.1 PFAM: POTRA domain, FtsQ-type; COGs: COG1181 D-alanine-D-alanine ligase and related ATP-grasp protein; HAMAP: D-alanine--D-alanine ligase; InterPro IPR011127:IPR011095:IPR005905; KEGG: cni:Calni_1723 D-alanine--D-alanine ligase; PFAM: D-alanine--D-alanine ligase, C-terminal; D-alanine--D-alanine ligase, N-terminal; PRIAM: D-alanine--D-alanine ligase; SPTR: D-alanine--D-alanine ligase; TIGRFAM: D-alanine--D-alanine ligase; polypeptide-transport-associated domain-containing protein 1794974 10815993 Flexsi_1676 Flexistipes sinusarabici DSM 4947 polypeptide-transport-associated domain-containing protein YP_004603891.1 1794291 R 717231 CDS YP_004603892.1 336323925 10815994 complement(1794967..1795872) 1 NC_015672.1 PFAM: D-ala D-ala ligase N-terminus; D-ala D-ala ligase C-terminus; TIGRFAM: D-alanine--D-alanine ligase; COGs: COG0773 UDP-N-acetylmuramate-alanine ligase; HAMAP: UDP-N-acetylmuramate-alanine ligase; InterPro IPR000713:IPR013221:IPR004101:IPR005758; KEGG: cni:Calni_1724 UDP-N-acetylmuramate--L-alanine ligase; PFAM: Mur ligase, N-terminal; Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramate--L-alanine ligase; SPTR: UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate-alanine ligase; D-alanine--D-alanine ligase 1795872 10815994 Flexsi_1677 Flexistipes sinusarabici DSM 4947 D-alanine--D-alanine ligase YP_004603892.1 1794967 R 717231 CDS YP_004603893.1 336323926 10815995 complement(1795869..1797245) 1 NC_015672.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramate--alanine ligase; COGs: COG0707 UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase; HAMAP:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; InterPro IPR004276:IPR007235; KEGG: ddf:DEFDS_0596 UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; PFAM: Glycosyl transferase, family 28, C-terminal; Glycosyl transferase, family 28; PRIAM: Undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; SPTR:UDP-N-acetylglucosamine--N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; UDP-N-acetylmuramate--L-alanine ligase 1797245 10815995 Flexsi_1678 Flexistipes sinusarabici DSM 4947 UDP-N-acetylmuramate--L-alanine ligase YP_004603893.1 1795869 R 717231 CDS YP_004603894.1 336323927 10815996 complement(1797245..1798288) 1 NC_015672.1 PFAM: Glycosyltransferase family 28 N-terminal domain; Glycosyltransferase family 28 C-terminal domain; TIGRFAM: undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; COGs: COG0772 Bacterial cell division membrane protein; InterPro IPR001182; KEGG: cni:Calni_1726 cell division protein FtsW; PFAM: Cell cycle protein; SPTR: Cell division protein FtsW; UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase 1798288 10815996 Flexsi_1679 Flexistipes sinusarabici DSM 4947 UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol N- acetylglucosamine transferase YP_004603894.1 1797245 R 717231 CDS YP_004603895.1 336323928 10815997 complement(1798285..1799364) 1 NC_015672.1 PFAM: Cell cycle protein; TIGRFAM: cell division protein FtsW; COGs: COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase; HAMAP: UDP-N-acetylmuramoylalanine-D-glutamate ligase; InterPro IPR013221:IPR004101:IPR005762; KEGG: cni:Calni_1727 UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase, central; Mur ligase, C-terminal; PRIAM: UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase; SPTR: UDP-N-acetylmuramoylalanine--D-glutamate ligase; TIGRFAM: UDP-N-acetylmuramoylalanine-D-glutamate ligase; cell cycle protein 1799364 10815997 Flexsi_1680 Flexistipes sinusarabici DSM 4947 cell cycle protein YP_004603895.1 1798285 R 717231 CDS YP_004603896.1 336323929 10815998 complement(1799357..1800625) 1 NC_015672.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoylalanine--D-glutamate ligase; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; HAMAP: Phospho-N-acetylmuramoyl-pentapeptide transferase; InterPro IPR018480:IPR018481:IPR003524; KEGG: ddf:DEFDS_0593 phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site; SPTR:Phospho-N-acetylmuramoyl-pentapeptide-transfer ase; TIGRFAM: Phospho-N-acetylmuramoyl-pentapeptide transferase; UDP-N-acetylmuramoylalanine--D-glutamate ligase 1800625 10815998 Flexsi_1681 Flexistipes sinusarabici DSM 4947 UDP-N-acetylmuramoylalanine--D-glutamate ligase YP_004603896.1 1799357 R 717231 CDS YP_004603897.1 336323930 10815999 complement(1800630..1801715) 1 NC_015672.1 PFAM: Phospho-N-acetylmuramoyl-pentapeptide-transferase signature 1; Glycosyl transferase family 4; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; COGs: COG0770 UDP-N-acetylmuramyl pentapeptide synthase; InterPro IPR000713:IPR013221:IPR005863; KEGG: cni:Calni_1729 UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diamin opimelate/D-alanyl-D-alanylligase; PFAM: Mur ligase, central; Mur ligase, N-terminal; PRIAM:UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-a lanineligase; SPTR:UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diam inopimelate/D-alanyl-D-alanylligase; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide-D-alanyl-D-alanine ligase; phospho-N-acetylmuramoyl-pentapeptide- transferase 1801715 10815999 Flexsi_1682 Flexistipes sinusarabici DSM 4947 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_004603897.1 1800630 R 717231 CDS YP_004603898.1 336323931 10816000 complement(1801705..1803099) 1 NC_015672.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; COGs: COG0769 UDP-N-acetylmuramyl tripeptide synthase; HAMAP:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-di aminopimelateligase; InterPro IPR000713:IPR013221:IPR004101:IPR005761; KEGG: cni:Calni_1730 UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase, central; Mur ligase, N-terminal; Mur ligase, C-terminal; PRIAM:UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelateligase; SPTR: UDP-N-acetylmuramyl-tripeptide synthetase; TIGRFAM:UDP-N-acetylmuramoylalanyl-D-glutamate-2,6- diaminopimelateligase; UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase 1803099 10816000 Flexsi_1683 Flexistipes sinusarabici DSM 4947 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase YP_004603898.1 1801705 R 717231 CDS YP_004603899.1 336323932 10816001 complement(1803086..1804537) 1 NC_015672.1 PFAM: Mur ligase family, glutamate ligase domain; Mur ligase family, catalytic domain; Mur ligase middle domain; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; COGs: COG0768 Cell division protein FtsI/penicillin-binding protein 2; InterPro IPR005311:IPR001460; KEGG: cni:Calni_1731 peptidoglycan glycosyltransferase; PFAM: Penicillin-binding protein, transpeptidase; Penicillin-binding protein, dimerisation domain; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Peptidoglycan glycosyltransferase; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase 1804537 10816001 Flexsi_1684 Flexistipes sinusarabici DSM 4947 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2, 6-diaminopimelate ligase YP_004603899.1 1803086 R 717231 CDS YP_004603900.1 336323933 10816002 complement(1804515..1806212) 1 NC_015672.1 PFAM: Penicillin binding protein transpeptidase domain; Penicillin-binding Protein dimerisation domain; KEGG: ddf:DEFDS_0589 hypothetical protein; SPTR: Putative uncharacterized protein; peptidoglycan glycosyltransferase 1806212 10816002 Flexsi_1685 Flexistipes sinusarabici DSM 4947 peptidoglycan glycosyltransferase YP_004603900.1 1804515 R 717231 CDS YP_004603901.1 336323934 10816003 complement(1806202..1806498) 1 NC_015672.1 COGs: COG0275 S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis; HAMAP: S-adenosyl-L-methionine-dependent methyltransferase, MraW; InterPro IPR002903; KEGG: ddf:DEFDS_0588 S-adenosyl-methyltransferase; PFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; SPTR: Ribosomal RNA small subunit methyltransferase H; TIGRFAM: S-adenosyl-L-methionine-dependent methyltransferase, MraW; hypothetical protein 1806498 10816003 Flexsi_1686 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603901.1 1806202 R 717231 CDS YP_004603902.1 336323935 10816004 complement(1806495..1807421) 1 NC_015672.1 PFAM: MraW methylase family; TIGRFAM: S-adenosyl-methyltransferase MraW; COGs: COG2001 conserved hypothetical protein; HAMAP: MraZ; InterPro IPR020603:IPR003444; KEGG: cni:Calni_1734 mraz protein; PFAM: MraZ domain; SPTR: Protein MraZ; TIGRFAM: MraZ; ribosomal RNA small subunit methyltransferase H 1807421 10816004 Flexsi_1687 Flexistipes sinusarabici DSM 4947 ribosomal RNA small subunit methyltransferase H YP_004603902.1 1806495 R 717231 CDS YP_004603903.1 336323936 10816005 complement(1807433..1807912) 1 NC_015672.1 PFAM: MraZ protein; TIGRFAM: mraZ protein; COGs: COG0355 F0F1-type ATP synthase epsilon subunit (mitochondrial delta subunit); HAMAP: ATPase, F1 complex, delta/epsilon subunit; InterPro IPR020546:IPR020547:IPR001469; KEGG: ddf:DEFDS_1885 F0F1-type ATP synthase subunit epsilon; PFAM: ATPase, F1 complex, delta/epsilon subunit, N-terminal; ATPase, F1 complex, delta/epsilon subunit, C-terminal; SPTR: ATP synthase epsilon chain; TIGRFAM: ATPase, F1 complex, delta/epsilon subunit; protein mraZ 1807912 10816005 Flexsi_1688 Flexistipes sinusarabici DSM 4947 protein mraZ YP_004603903.1 1807433 R 717231 CDS YP_004603904.1 336323937 10816006 complement(1808211..1808624) 1 NC_015672.1 PFAM: ATP synthase, Delta/Epsilon chain, beta-sandwich domain; ATP synthase, Delta/Epsilon chain, long alpha-helix domain; TIGRFAM: ATP synthase, F1 epsilon subunit (delta in mitochondria); COGs: COG0055 F0F1-type ATP synthase beta subunit; HAMAP: ATPase, F1 complex, beta subunit; InterProIPR003593:IPR004100:IPR000194:IPR000793:IPR 005722; KEGG: ddf:DEFDS_1886 F0F1-type ATP synthase subunit beta; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP synthase subunit beta; TIGRFAM: ATPase, F1 complex, beta subunit; ATP synthase subunit epsilon 1808624 10816006 Flexsi_1689 Flexistipes sinusarabici DSM 4947 ATP synthase subunit epsilon YP_004603904.1 1808211 R 717231 CDS YP_004603905.1 336323938 10816007 complement(1808627..1810033) 1 NC_015672.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: ATP synthase, F1 beta subunit; COGs: COG0224 F0F1-type ATP synthase gamma subunit; HAMAP: ATP synthase gamma chain; InterPro IPR000131; KEGG: ddf:DEFDS_1887 F0F1-type ATP synthase subunit gamma; PFAM: ATPase, F1 complex, gamma subunit; SPTR: ATP synthase gamma chain; TIGRFAM: ATPase, F1 complex, gamma subunit; ATP synthase subunit beta 1810033 10816007 Flexsi_1690 Flexistipes sinusarabici DSM 4947 ATP synthase subunit beta YP_004603905.1 1808627 R 717231 CDS YP_004603906.1 336323939 10816008 complement(1810058..1810921) 1 NC_015672.1 PFAM: ATP synthase; TIGRFAM: ATP synthase, F1 gamma subunit; COGs: COG0056 F0F1-type ATP synthase alpha subunit; HAMAP: ATPase, F1 complex, alpha subunit; InterPro IPR004100:IPR000194:IPR000793:IPR005294; KEGG: cni:Calni_1589 ATP synthase f1 subcomplex alpha subunit; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal; ATPase, F1/V1/A1 complex, alpha/beta subunit, C-terminal; SPTR: ATP synthase subunit alpha; TIGRFAM: ATPase, F1 complex, alpha subunit; ATP synthase subunit gamma 1810921 10816008 Flexsi_1691 Flexistipes sinusarabici DSM 4947 ATP synthase subunit gamma YP_004603906.1 1810058 R 717231 CDS YP_004603907.1 336323940 10816009 complement(1810937..1812445) 1 NC_015672.1 PFAM: ATP synthase alpha/beta family, beta-barrel domain; ATP synthase alpha/beta family, nucleotide-binding domain; ATP synthase alpha/beta chain, C terminal domain; TIGRFAM: proton translocating ATP synthase, F1 alpha subunit; COGs: COG0712 F0F1-type ATP synthase delta subunit (mitochondrial oligomycin sensitivity protein); HAMAP: ATPase, F1 complex, OSCP/delta subunit; InterPro IPR000711; KEGG: ddf:DEFDS_1889 F0F1-type ATP synthase subunit delta; PFAM: ATPase, F1 complex, OSCP/delta subunit; SPTR: ATP synthase subunit delta; TIGRFAM: ATPase, F1 complex, OSCP/delta subunit; ATP synthase subunit alpha 1812445 10816009 Flexsi_1692 Flexistipes sinusarabici DSM 4947 ATP synthase subunit alpha YP_004603907.1 1810937 R 717231 CDS YP_004603908.1 336323941 10816010 complement(1812473..1813012) 1 NC_015672.1 PFAM: ATP synthase delta (OSCP) subunit; TIGRFAM: ATP synthase, F1 delta subunit; COGs: COG0711 F0F1-type ATP synthase subunit b; HAMAP: ATP synthase subunit b; InterPro IPR002146:IPR005864; KEGG: cni:Calni_1591 h+transporting two-sector atpase B/b' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: H+transporting two-sector ATPase B/B' subunit; TIGRFAM: ATPase, F0 complex, subunit B, bacterial; ATP synthase subunit delta 1813012 10816010 Flexsi_1693 Flexistipes sinusarabici DSM 4947 ATP synthase subunit delta YP_004603908.1 1812473 R 717231 CDS YP_004603909.1 336323942 10816011 complement(1813009..1813569) 1 NC_015672.1 PFAM: ATP synthase B/B' CF(0); TIGRFAM: ATP synthase, F0 subunit b; HAMAP: ATP synthase subunit b; InterPro IPR002146; KEGG: ddf:DEFDS_1891 F0F1-type ATP synthase B' subunit; PFAM: ATPase, F0 complex, subunit B/B', bacterial/chloroplast; SPTR: F0F1-type ATP synthase, B' subunit; ATP synthase subunit b 1813569 10816011 Flexsi_1694 Flexistipes sinusarabici DSM 4947 ATP synthase subunit b YP_004603909.1 1813009 R 717231 CDS YP_004603910.1 336323943 10816012 complement(1813583..1814008) 1 NC_015672.1 PFAM: ATP synthase B/B' CF(0); COGs: COG1309 Transcriptional regulator; InterPro IPR001647; KEGG: gme:Gmet_2645 TetR family transcriptional regulator; PFAM: Transcriptional regulator, TetR-like, DNA-binding, bacterial/archaeal; SPTR: Transcriptional regulator, TetR family; ATP synthase subunit b 1814008 10816012 Flexsi_1695 Flexistipes sinusarabici DSM 4947 ATP synthase subunit b YP_004603910.1 1813583 R 717231 CDS YP_004603911.1 336323944 10816013 1814779..1815375 1 NC_015672.1 PFAM: YsiA-like protein, C-terminal region; Bacterial regulatory proteins, tetR family; KEGG: gur:Gura_3349 hypothetical protein; SPTR: Putative uncharacterized protein; TetR family transcriptional regulator 1815375 10816013 Flexsi_1696 Flexistipes sinusarabici DSM 4947 TetR family transcriptional regulator YP_004603911.1 1814779 D 717231 CDS YP_004603912.1 336323945 10816014 1815502..1815975 1 NC_015672.1 manually curated; hypothetical protein 1815975 10816014 Flexsi_1697 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603912.1 1815502 D 717231 CDS YP_004603913.1 336323946 10816016 complement(1816505..1817776) 1 NC_015672.1 PFAM: EAL domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; diguanylate cyclase/phosphodiesterase 1817776 10816016 Flexsi_1699 Flexistipes sinusarabici DSM 4947 diguanylate cyclase/phosphodiesterase YP_004603913.1 1816505 R 717231 CDS YP_004603914.1 336323947 10816017 complement(1817865..1819091) 1 NC_015672.1 InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 1819091 10816017 Flexsi_1700 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603914.1 1817865 R 717231 CDS YP_004603915.1 336323948 10816018 1819194..1820513 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; transposase IS4 family protein 1820513 10816018 Flexsi_1701 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603915.1 1819194 D 717231 CDS YP_004603916.1 336323949 10816019 complement(1821025..1822392) 1 NC_015672.1 PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 1822392 10816019 Flexsi_1702 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603916.1 1821025 R 717231 CDS YP_004603917.1 336323950 10816022 complement(1823088..1823774) 1 NC_015672.1 PFAM: IstB-like ATP binding protein; COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; IstB domain-containing protein ATP-binding protein 1823774 10816022 Flexsi_1705 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004603917.1 1823088 R 717231 CDS YP_004603918.1 336323951 10816023 complement(1823761..1825284) 1 NC_015672.1 PFAM: Integrase core domain; InterPro IPR004370; KEGG: ddf:DEFDS_1325 4-oxalocrotonate tautomerase; PFAM: 4-oxalocrotonate tautomerase; SPTR: 4-oxalocrotonate tautomerase; integrase catalytic subunit 1825284 10816023 Flexsi_1706 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004603918.1 1823761 R 717231 CDS YP_004603919.1 336323952 10816024 complement(1825569..1825757) 1 NC_015672.1 PFAM: Tautomerase enzyme; TIGRFAM: 4-oxalocrotonate tautomerase family enzyme; COGs: COG2951 Membrane-bound lytic murein transglycosylase B; KEGG: ddf:DEFDS_0819 membrane-bound lytic murein transglycosylase B; SPTR: Membrane-bound lytic murein transglycosylase B; 4-oxalocrotonate tautomerase 1825757 10816024 Flexsi_1707 Flexistipes sinusarabici DSM 4947 4-oxalocrotonate tautomerase YP_004603919.1 1825569 R 717231 CDS YP_004603920.1 336323953 10816025 complement(1825783..1826682) 1 NC_015672.1 TIGRFAM: lytic murein transglycosylase B; InterPro IPR004096; KEGG: dat:HRM2_39440 hypothetical protein; PFAM: 4-vinyl reductase, 4VR; SPTR: Putative uncharacterized protein; membrane-bound lytic murein transglycosylase B 1826682 10816025 Flexsi_1708 Flexistipes sinusarabici DSM 4947 membrane-bound lytic murein transglycosylase B YP_004603920.1 1825783 R 717231 CDS YP_004603921.1 336323954 10816026 1826847..1827365 1 NC_015672.1 PFAM: V4R domain; COGs: COG2199 FOG: GGDEF domain; InterPro IPR000160; KEGG: dds:Ddes_0422 diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; SPTR: Diguanylate cyclase; 4-vinyl reductase 4VR 1827365 10816026 Flexsi_1709 Flexistipes sinusarabici DSM 4947 4-vinyl reductase 4VR YP_004603921.1 1826847 D 717231 CDS YP_004603922.1 336323955 10816027 1827368..1828015 1 NC_015672.1 PFAM: GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; diguanylate cyclase 1828015 10816027 Flexsi_1710 Flexistipes sinusarabici DSM 4947 diguanylate cyclase YP_004603922.1 1827368 D 717231 CDS YP_004603923.1 336323956 10816028 complement(1828188..1829237) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein 1829237 10816028 Flexsi_1711 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603923.1 1828188 R 717231 CDS YP_004603924.1 336323957 10816030 complement(1829762..1830670) 1 NC_015672.1 PFAM: Quinolinate synthetase A protein; TIGRFAM: quinolinate synthetase complex, A subunit; COGs: COG1692 conserved hypothetical protein; InterPro IPR004843; KEGG: ddf:DEFDS_0482 hypothetical protein; PFAM: Metallophosphoesterase; SPTR: Putative uncharacterized protein; quinolinate synthase A 1830670 10816030 Flexsi_1713 Flexistipes sinusarabici DSM 4947 quinolinate synthase A YP_004603924.1 1829762 R 717231 CDS YP_004603925.1 336323958 10816031 complement(1830672..1831469) 1 NC_015672.1 TIGRFAM: metallophosphoesterase, MG_246/BB_0505 family; COGs: COG1418 HD superfamily hydrolase; HAMAP: 2',3'-cyclic-nucleotide 2'-phosphodiesterase; InterProIPR004087:IPR003607:IPR018111:IPR006674:IPR 017705:IPR006675; KEGG: ddf:DEFDS_0481 hypothetical protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; K Homology, type 1, subgroup; SMART: Metal-dependent phosphohydrolase, HD region; K Homology; SPTR: Putative uncharacterized protein; TIGRFAM: 2,3-cyclic-nucleotide 2-phosphodiesterase; HDIG; metallophosphoesterase 1831469 10816031 Flexsi_1714 Flexistipes sinusarabici DSM 4947 metallophosphoesterase YP_004603925.1 1830672 R 717231 CDS YP_004603926.1 336323959 10816032 complement(1831459..1833018) 1 NC_015672.1 PFAM: KH domain; HD domain; Domain of unknown function (DUF3552); TIGRFAM: conserved hypothetical protein YmdA/YtgF; uncharacterized domain HDIG; COGs: COG0212 5-formyltetrahydrofolate cyclo-ligase; InterPro IPR002698; KEGG: ddf:DEFDS_0480 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase; SPTR: 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; 2,3 cyclic-nucleotide 2-phosphodiesterase 1833018 10816032 Flexsi_1715 Flexistipes sinusarabici DSM 4947 2,3 cyclic-nucleotide 2-phosphodiesterase YP_004603926.1 1831459 R 717231 CDS YP_004603927.1 336323960 10816033 complement(1833018..1833569) 1 NC_015672.1 PFAM: 5-formyltetrahydrofolate cyclo-ligase family; TIGRFAM: 5,10-methenyltetrahydrofolate synthetase; COGs: COG2256 ATPase related to the helicase subunit of the Holliday junction resolvase; InterPro IPR003593:IPR003959; KEGG: cni:Calni_0332 aaa atpase central domain protein; PFAM: ATPase, AAA-type, core; SMART: ATPase, AAA+ type, core; SPTR: AAA ATPase central domain protein; 5-formyltetrahydrofolate cyclo-ligase 1833569 10816033 Flexsi_1716 Flexistipes sinusarabici DSM 4947 5-formyltetrahydrofolate cyclo-ligase YP_004603927.1 1833018 R 717231 CDS YP_004603928.1 336323961 10816034 complement(1833559..1834785) 1 NC_015672.1 PFAM: MgsA AAA+ ATPase C terminal; ATPase family associated with various cellular activities (AAA); 6S / SsrS RNA as predicted by Rfam (RF00013), score 108.25; AAA ATPase 1834785 10816034 Flexsi_1717 Flexistipes sinusarabici DSM 4947 AAA ATPase YP_004603928.1 1833559 R 717231 CDS YP_004603929.1 336323962 10816036 complement(1834985..1835260) 1 NC_015672.1 PFAM: Cell division protein ZapA; KEGG: dap:Dacet_1925 hypothetical protein; hypothetical protein 1835260 10816036 Flexsi_1718 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603929.1 1834985 R 717231 CDS YP_004603930.1 336323963 10816037 complement(1835273..1835485) 1 NC_015672.1 PFAM: Protein of unknown function (DUF904); COGs: COG0072 Phenylalanyl-tRNA synthetase beta subunit; HAMAP: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; InterProIPR002547:IPR005146:IPR005147:IPR005121:IPR 004532; KEGG: ddf:DEFDS_1621 phenylalanyl-tRNA synthetase subunit beta; PFAM: B3/B4 tRNA-binding domain; tRNA-binding region; tRNA synthetase, B5; Phenylalanyl-tRNA synthetase, beta subunit, ferrodoxin-fold anticodon-binding; SPTR: Phenylalanyl-tRNA synthetase, beta subunit; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, beta subunit, bacterial; hypothetical protein 1835485 10816037 Flexsi_1719 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603930.1 1835273 R 717231 CDS YP_004603931.1 336323964 10816038 complement(1835757..1838138) 1 NC_015672.1 PFAM: tRNA synthetase B5 domain; Ferredoxin-fold anticodon binding domain; B3/4 domain; Putative tRNA binding domain; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit, non-spirochete bacterial; COGs: COG0016 Phenylalanyl-tRNA synthetase alpha subunit; HAMAP: Phenylalanyl-tRNA synthetase alpha chain; InterPro IPR004188:IPR002319:IPR004529; KEGG: ddf:DEFDS_1622 phenylalanyl-tRNA synthetase subunit alpha; PFAM: Phenylalanyl-tRNA synthetase alpha chain; Phenylalanyl-tRNA synthetase, class II, N-terminal; SPTR: Phenylalanyl-tRNA synthetase alpha chain; TIGRFAM: Phenylalanyl-tRNA synthetase, class IIc, alpha subunit; phenylalanyl-tRNA synthetase subunit beta 1838138 10816038 Flexsi_1720 Flexistipes sinusarabici DSM 4947 phenylalanyl-tRNA synthetase subunit beta YP_004603931.1 1835757 R 717231 CDS YP_004603932.1 336323965 10816039 complement(1838148..1839161) 1 NC_015672.1 PFAM: tRNA synthetases class II core domain (F); Aminoacyl tRNA synthetase class II, N-terminal domain; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; COGs: COG0292 Ribosomal protein L20; HAMAP: Ribosomal protein L20; InterPro IPR005813; KEGG: ddf:DEFDS_1501 50S ribosomal protein L20; PFAM: Ribosomal protein L20; SPTR: 50S ribosomal protein L20; TIGRFAM: Ribosomal protein L20; phenylalanyl-tRNA synthetase subunit alpha 1839161 10816039 Flexsi_1721 Flexistipes sinusarabici DSM 4947 phenylalanyl-tRNA synthetase subunit alpha YP_004603932.1 1838148 R 717231 CDS YP_004603933.1 336323966 10816040 complement(1839266..1839613) 1 NC_015672.1 PFAM: Ribosomal protein L20; TIGRFAM: ribosomal protein L20; HAMAP: Ribosomal protein L35; InterPro IPR001706; KEGG: ddf:DEFDS_1502 50S ribosomal protein L35; PFAM: Ribosomal protein L35; SPTR: 50S ribosomal protein L35; TIGRFAM: Ribosomal protein L35; 50S ribosomal protein L20 1839613 10816040 Flexsi_1722 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L20 YP_004603933.1 1839266 R 717231 CDS YP_004603934.1 336323967 10816041 complement(1839630..1839827) 1 NC_015672.1 PFAM: Ribosomal protein L35; TIGRFAM: ribosomal protein L35; COGs: COG0290 Translation initiation factor 3 (IF-3); HAMAP: Translation initiation factor IF-3; InterPro IPR019814:IPR019815:IPR001288; KEGG: cni:Calni_1323 bacterial translation initiation factor 3 (bif-3); PFAM: Translation initiation factor 3, C-terminal; Translation initiation factor 3, N-terminal; SPTR: Translation initiation factor IF-3; TIGRFAM: Translation initiation factor 3; manually curated; 50S ribosomal protein L35 1839827 10816041 Flexsi_1723 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L35 YP_004603934.1 1839630 R 717231 CDS YP_004603935.1 336323968 10816042 complement(1839841..1840371) 1 NC_015672.1 PFAM: Translation initiation factor IF-3, C-terminal domain; Translation initiation factor IF-3, N-terminal domain; TIGRFAM: translation initiation factor IF-3; COGs: COG0441 Threonyl-tRNA synthetase; InterProIPR004095:IPR012947:IPR002314:IPR004154:IPR 002320; KEGG: ddf:DEFDS_1504 threonyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; Threonyl/alanyl tRNA synthetase, SAD; TGS; Anticodon-binding; SPTR: Threonyl-tRNA synthetase; TIGRFAM: Threonyl-tRNA synthetase, class IIa; translation initiation factor IF-3 1840371 10816042 Flexsi_1724 Flexistipes sinusarabici DSM 4947 translation initiation factor IF-3 YP_004603935.1 1839841 R 717231 CDS YP_004603936.1 336323969 10816043 complement(1840375..1842297) 1 NC_015672.1 PFAM: Anticodon binding domain; Threonyl and Alanyl tRNA synthetase second additional domain; tRNA synthetase class II core domain (G, H, P, S and T); TGS domain; TIGRFAM: threonyl-tRNA synthetase; This gene is disrupted by insertion of repetitive element; manually curated; threonyl-tRNA synthetase 1842297 10816043 Flexsi_1725 Flexistipes sinusarabici DSM 4947 threonyl-tRNA synthetase YP_004603936.1 1840375 R 717231 CDS YP_004603937.1 336323970 10816044 complement(1842899..1844083) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS116/IS110/IS902 family protein 1844083 10816044 Flexsi_1727 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004603937.1 1842899 R 717231 CDS YP_004603938.1 336323971 10816045 complement(1844478..1845527) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0566 rRNA methylase; InterPro IPR001537:IPR004441; KEGG: cni:Calni_0015 RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase, SpoU; SPTR: RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase TrmH, group 3; transposase IS4 family protein 1845527 10816045 Flexsi_1728 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603938.1 1844478 R 717231 CDS YP_004603939.1 336323972 10816046 complement(1848103..1848792) 1 NC_015672.1 PFAM: SpoU rRNA Methylase family; RNA 2'-O ribose methyltransferase substrate binding; TIGRFAM: rRNA methylase, putative, group 3; InterPro IPR011642; KEGG: ddf:DEFDS_2159 hypothetical protein; PFAM: Nucleoside recognition; SPTR: Putative uncharacterized protein; TrmH family RNA methyltransferase 1848792 10816046 Flexsi_1729 Flexistipes sinusarabici DSM 4947 TrmH family RNA methyltransferase YP_004603939.1 1848103 R 717231 CDS YP_004603940.1 336323973 10816047 1848853..1849275 1 NC_015672.1 PFAM: Nucleoside recognition; KEGG: ddf:DEFDS_2158 hypothetical protein; SPTR: Putative uncharacterized protein; nucleoside recognition domain-containing protein 1849275 10816047 Flexsi_1730 Flexistipes sinusarabici DSM 4947 nucleoside recognition domain-containing protein YP_004603940.1 1848853 D 717231 CDS YP_004603941.1 336323974 10816048 1849266..1849706 1 NC_015672.1 COGs: COG1373 ATPase (AAA+ superfamily); KEGG: ddf:DEFDS_0392 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1849706 10816048 Flexsi_1731 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603941.1 1849266 D 717231 CDS YP_004603942.1 336323975 10816049 complement(1849837..1851000) 1 NC_015672.1 COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: dat:HRM2_48360 TolC; PFAM: Outer membrane efflux protein; SPTR: TolC; hypothetical protein 1851000 10816049 Flexsi_1732 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603942.1 1849837 R 717231 CDS YP_004603943.1 336323976 10816050 complement(1851637..1852881) 1 NC_015672.1 PFAM: Outer membrane efflux protein; COGs: COG0841 Cation/multidrug efflux pump; InterPro IPR001036; KEGG: dat:HRM2_48370 NolG; PFAM: Acriflavin resistance protein; SPTR: Acriflavin resistance protein; outer membrane efflux protein 1852881 10816050 Flexsi_1733 Flexistipes sinusarabici DSM 4947 outer membrane efflux protein YP_004603943.1 1851637 R 717231 CDS YP_004603944.1 336323977 10816051 complement(1853260..1856361) 1 NC_015672.1 PFAM: AcrB/AcrD/AcrF family; COGs: COG0845 Membrane-fusion protein; InterPro IPR006143; KEGG: dat:HRM2_48380 putative membrane-fusion protein; PFAM: Secretion protein HlyD; SPTR: Putative membrane-fusion protein; TIGRFAM: Secretion protein HlyD; acriflavin resistance protein 1856361 10816051 Flexsi_1734 Flexistipes sinusarabici DSM 4947 acriflavin resistance protein YP_004603944.1 1853260 R 717231 CDS YP_004603945.1 336323978 10816052 complement(1856361..1857413) 1 NC_015672.1 PFAM: HlyD family secretion protein; TIGRFAM: RND family efflux transporter, MFP subunit; COGs: COG1846 Transcriptional regulators; InterPro IPR000835; KEGG: ant:Arnit_0841 MarR family transcriptional regulator; PFAM: HTH transcriptional regulator, MarR; SMART: HTH transcriptional regulator, MarR; SPTR: Transcriptional regulator, MarR family protein; RND family efflux transporter MFP subunit 1857413 10816052 Flexsi_1735 Flexistipes sinusarabici DSM 4947 RND family efflux transporter MFP subunit YP_004603945.1 1856361 R 717231 CDS YP_004603946.1 336323979 10816053 complement(1857397..1857858) 1 NC_015672.1 PFAM: MarR family; KEGG: ddf:DEFDS_1152 hypothetical protein; SPTR: Putative uncharacterized protein; MarR family transcriptional regulator 1857858 10816053 Flexsi_1736 Flexistipes sinusarabici DSM 4947 MarR family transcriptional regulator YP_004603946.1 1857397 R 717231 CDS YP_004603947.1 336323980 10816054 1858042..1860525 1 NC_015672.1 InterPro IPR008815:IPR012902; KEGG: nam:NAMH_1676 S23 ribosomal; PFAM: 23S rRNA-associated protein; Prepilin-type cleavage/methylation, N-terminal; SPTR: S23 ribosomal; hypothetical protein 1860525 10816054 Flexsi_1737 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603947.1 1858042 D 717231 CDS YP_004603948.1 336323981 10816055 1860788..1861624 1 NC_015672.1 PFAM: S23 ribosomal protein; InterPro IPR012902; KEGG: cni:Calni_0394 hypothetical protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 1861624 10816055 Flexsi_1738 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004603948.1 1860788 D 717231 CDS YP_004603949.1 336323982 10816056 1861617..1862144 1 NC_015672.1 TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; InterPro IPR008815; KEGG: dba:Dbac_2569 S23 ribosomal protein; PFAM: 23S rRNA-associated protein; SPTR: S23 ribosomal protein; hypothetical protein 1862144 10816056 Flexsi_1739 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603949.1 1861617 D 717231 CDS YP_004603950.1 336323983 10816057 1862533..1862895 1 NC_015672.1 PFAM: S23 ribosomal protein; InterPro IPR012902; KEGG: cni:Calni_0395 hypothetical protein; SPTR: Putative uncharacterized protein; S23 ribosomal protein 1862895 10816057 Flexsi_1740 Flexistipes sinusarabici DSM 4947 S23 ribosomal protein YP_004603950.1 1862533 D 717231 CDS YP_004603951.1 336323984 10816058 1862880..1863752 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; KEGG: cni:Calni_0396 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1863752 10816058 Flexsi_1741 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603951.1 1862880 D 717231 CDS YP_004603952.1 336323985 10816059 1863749..1864135 1 NC_015672.1 InterPro IPR002559; KEGG: glo:Glov_3666 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 1864135 10816059 Flexsi_1742 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603952.1 1863749 D 717231 CDS YP_004603953.1 336323986 10816060 complement(1864252..1865619) 1 NC_015672.1 PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 1865619 10816060 Flexsi_1743 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603953.1 1864252 R 717231 CDS YP_004603954.1 336323987 10816062 1866327..1867694 1 NC_015672.1 PFAM: Transposase domain (DUF772); KEGG: dae:Dtox_1626 transposase IS4 family protein; SPTR: Transposase IS4 family protein; transposase IS4 family protein 1867694 10816062 Flexsi_1745 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603954.1 1866327 D 717231 CDS YP_004603955.1 336323988 10816063 1868065..1868556 1 NC_015672.1 manually curated; transposase IS4 family protein 1868556 10816063 Flexsi_1746 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603955.1 1868065 D 717231 CDS YP_004603956.1 336323989 10816065 complement(1869483..1870727) 1 NC_015672.1 PFAM: Integrase core domain; InterPro IPR002525; KEGG: sul:SYO3AOP1_1339 transposase IS116/IS110/IS902 family protein; PFAM: Transposase, IS111A/IS1328/IS1533; SPTR: Transposase IS116/IS110/IS902 family protein; integrase catalytic subunit 1870727 10816065 Flexsi_1748 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004603956.1 1869483 R 717231 CDS YP_004603957.1 336323990 10816066 complement(1870812..1871513) 1 NC_015672.1 PFAM: Transposase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: mmq:MmarC5_1142 NADPH-dependent FMN reductase; PFAM: NADPH-dependent FMN reductase; SPTR: NADPH-dependent FMN reductase; transposase IS111A/IS1328/IS1533 1871513 10816066 Flexsi_1749 Flexistipes sinusarabici DSM 4947 transposase IS111A/IS1328/IS1533 YP_004603957.1 1870812 R 717231 CDS YP_004603958.1 336323991 10816067 1871950..1872531 1 NC_015672.1 PFAM: NADPH-dependent FMN reductase; COGs: COG0815 Apolipoprotein N-acyltransferase; HAMAP: Apolipoprotein N-acyltransferase; InterPro IPR003010:IPR004563; KEGG: ddf:DEFDS_0986 apolipoprotein N-acyltransferase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Apolipoprotein N-acyltransferase; TIGRFAM: Apolipoprotein N-acyltransferase; NADPH-dependent FMN reductase 1872531 10816067 Flexsi_1750 Flexistipes sinusarabici DSM 4947 NADPH-dependent FMN reductase YP_004603958.1 1871950 D 717231 CDS YP_004603959.1 336323992 10816068 1872741..1874216 1 NC_015672.1 PFAM: Carbon-nitrogen hydrolase; TIGRFAM: apolipoprotein N-acyltransferase; HAMAP: Twin-arginine translocation protein TatA/E; InterPro IPR003369:IPR006312; KEGG: ddf:DEFDS_0987 twin-arginine translocation protein, TatA/E family; PFAM: Bacterial sec-independent translocation protein mttA/Hcf106; SPTR: Sec-independent protein translocase protein tatA/E homolog 1; TIGRFAM: Twin-arginine translocation protein TatA/E; apolipoprotein N-acyltransferase 1874216 10816068 Flexsi_1751 Flexistipes sinusarabici DSM 4947 apolipoprotein N-acyltransferase YP_004603959.1 1872741 D 717231 CDS YP_004603960.1 336323993 10816069 1874298..1874522 1 NC_015672.1 PFAM: mttA/Hcf106 family; TIGRFAM: twin arginine-targeting protein translocase, TatA/E family; COGs: COG4012 conserved hypothetical protein; InterPro IPR014846; KEGG: ddf:DEFDS_0988 hypothetical protein; PFAM: Protein of unknown function DUF1786, putative pyruvate format-lyase activating enzyme; SPTR: Putative uncharacterized protein; Sec-independent protein translocase protein tatA/E-like protein 1874522 10816069 Flexsi_1752 Flexistipes sinusarabici DSM 4947 Sec-independent protein translocase protein tatA/E-like protein YP_004603960.1 1874298 D 717231 CDS YP_004603961.1 336323994 10816070 1874523..1875539 1 NC_015672.1 PFAM: Putative pyruvate format-lyase activating enzyme (DUF1786); COGs: COG0619 ABC-type cobalt transport system permease component CbiQ and related transporter; InterPro IPR003339; KEGG: ddf:DEFDS_0989 cobalt/nickel ABC transporter permease; PFAM: Cobalt transport protein; SPTR: Cobalt/nickel ABC transporter, permease; hypothetical protein 1875539 10816070 Flexsi_1753 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603961.1 1874523 D 717231 CDS YP_004603962.1 336323995 10816071 1875593..1876342 1 NC_015672.1 PFAM: Cobalt transport protein; COGs: COG0101 Pseudouridylate synthase; HAMAP: Pseudouridine synthase I, TruA; InterPro IPR020097:IPR001406; KEGG: cni:Calni_0390 tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain; SPTR: tRNA pseudouridine synthase A; TIGRFAM: Pseudouridine synthase I, TruA; ABC transporter 1876342 10816071 Flexsi_1754 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603962.1 1875593 D 717231 CDS YP_004603963.1 336323996 10816072 1876335..1877069 1 NC_015672.1 PFAM: tRNA pseudouridine synthase; TIGRFAM: pseudouridylate synthase I; KEGG: cni:Calni_0034 hypothetical protein; tRNA pseudouridine synthase A 1877069 10816072 Flexsi_1755 Flexistipes sinusarabici DSM 4947 tRNA pseudouridine synthase A YP_004603963.1 1876335 D 717231 CDS YP_004603964.1 336323997 10816073 complement(1877066..1877299) 1 NC_015672.1 KEGG: ddf:DEFDS_1354 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1877299 10816073 Flexsi_1756 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603964.1 1877066 R 717231 CDS YP_004603965.1 336323998 10816074 1877877..1878725 1 NC_015672.1 hypothetical protein 1878725 10816074 Flexsi_1757 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603965.1 1877877 D 717231 CDS YP_004603966.1 336323999 10816075 1878974..1879177 1 NC_015672.1 COGs: COG0438 Glycosyltransferase; InterPro IPR001296; KEGG: ilo:IL0120 membrane-associated protein; PFAM: Glycosyl transferase, group 1; SPTR: Membrane-associated protein; hypothetical protein 1879177 10816075 Flexsi_1758 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603966.1 1878974 D 717231 CDS YP_004603967.1 336324000 10816076 complement(1879179..1881425) 1 NC_015672.1 PFAM: Glycosyl transferases group 1; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; group 1 glycosyl transferase 1881425 10816076 Flexsi_1759 Flexistipes sinusarabici DSM 4947 group 1 glycosyl transferase YP_004603967.1 1879179 R 717231 CDS YP_004603968.1 336324001 10816077 complement(1881563..1882612) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); transposase IS4 family protein 1882612 10816077 Flexsi_1760 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603968.1 1881563 R 717231 CDS YP_004603969.1 336324002 10816078 complement(1882650..1882748) 1 NC_015672.1 InterPro IPR005242; KEGG: maq:Maqu_3008 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1882748 10816078 Flexsi_1761 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603969.1 1882650 R 717231 CDS YP_004603970.1 336324003 10816079 complement(1882745..1883809) 1 NC_015672.1 PFAM: Uncharacterised protein family (UPF0104); TIGRFAM: conserved hypothetical protein; COGs: COG2022 Uncharacterized protein of thiazole biosynthesis; HAMAP: Thiazole biosynthesis; InterPro IPR008867; KEGG: cni:Calni_0489 thiazole-phosphate synthase; PFAM: Thiazole biosynthesis; SPTR: Thiazole synthase; hypothetical protein 1883809 10816079 Flexsi_1762 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603970.1 1882745 R 717231 CDS YP_004603971.1 336324004 10816080 1884101..1884877 1 NC_015672.1 PFAM: Thiazole biosynthesis protein ThiG; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR007197:IPR010722:IPR012726; KEGG: cni:Calni_0488 tyrosine lyase thih; PFAM: Biotin/thiamin synthesis-associated protein; Radical SAM; SPTR: Tyrosine lyase ThiH; TIGRFAM: Thiazole biosynthesis ThiH; thiazole synthase 1884877 10816080 Flexsi_1763 Flexistipes sinusarabici DSM 4947 thiazole synthase YP_004603971.1 1884101 D 717231 CDS YP_004603972.1 336324005 10816081 1884893..1886017 1 NC_015672.1 PFAM: Radical SAM superfamily; Biotin and Thiamin Synthesis associated domain; TIGRFAM: thiazole biosynthesis protein ThiH; COGs: COG2265 SAM-dependent methyltransferase related to tRNA (uracil-5-)-methyltransferase; InterPro IPR002792:IPR010280; KEGG: ddf:DEFDS_0222 tRNA (uracil-5-)-methyltransferase; PFAM: Deoxyribonuclease/rho motif-related TRAM; (Uracil-5)-methyltransferase; SPTR: tRNA (Uracil-5-)-methyltransferase; thiazole biosynthesis protein ThiH 1886017 10816081 Flexsi_1764 Flexistipes sinusarabici DSM 4947 thiazole biosynthesis protein ThiH YP_004603972.1 1884893 D 717231 CDS YP_004603973.1 336324006 10816082 1886014..1887210 1 NC_015672.1 PFAM: tRNA (Uracil-5-)-methyltransferase; TRAM domain; TRAM domain-containing protein 1887210 10816082 Flexsi_1765 Flexistipes sinusarabici DSM 4947 TRAM domain-containing protein YP_004603973.1 1886014 D 717231 CDS YP_004603974.1 336324007 10816083 1887322..1887807 1 NC_015672.1 InterPro IPR003660:IPR004010; KEGG: dat:HRM2_16030 hypothetical protein; PFAM: HAMP linker domain; Cache; SMART: HAMP linker domain; SPTR: Putative uncharacterized protein; hypothetical protein 1887807 10816083 Flexsi_1766 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603974.1 1887322 D 717231 CDS YP_004603975.1 336324008 10816084 1887809..1888903 1 NC_015672.1 PFAM: HAMP domain; Cache domain; COGs: COG1192 ATPase involved in chromosome partitioning; InterPro IPR002586; KEGG: cni:Calni_1306 chromosome segregation atpase; PFAM: Cobyrinic acid a,c-diamide synthase; SPTR: Chromosome segregation ATPase; histidine kinase HAMP region domain-containing protein 1888903 10816084 Flexsi_1767 Flexistipes sinusarabici DSM 4947 histidine kinase HAMP region domain-containing protein YP_004603975.1 1887809 D 717231 CDS YP_004603976.1 336324009 10816085 1889100..1889861 1 NC_015672.1 PFAM: CobQ/CobB/MinD/ParA nucleotide binding domain; COGs: COG1475 transcriptional regulator protein; InterPro IPR003115:IPR004437; KEGG: ddf:DEFDS_0127 chromosome partitioning protein ParB; PFAM: ParB-like nuclease; SMART: ParB-like nuclease; SPTR: Chromosome partitioning protein ParB; TIGRFAM: ParB-like partition protein; Cobyrinic acid ac-diamide synthase 1889861 10816085 Flexsi_1768 Flexistipes sinusarabici DSM 4947 Cobyrinic acid ac-diamide synthase YP_004603976.1 1889100 D 717231 CDS YP_004603977.1 336324010 10816086 1889858..1890706 1 NC_015672.1 PFAM: ParB-like nuclease domain; TIGRFAM: ParB-like partition proteins; COGs: COG1664 Integral membrane protein CcmA involved in cell shape determination; InterPro IPR007607; KEGG: ddf:DEFDS_0128 hypothetical protein; PFAM: Protein of unknown function DUF583; SPTR: Putative uncharacterized protein; parB-like partition protein 1890706 10816086 Flexsi_1769 Flexistipes sinusarabici DSM 4947 parB-like partition protein YP_004603977.1 1889858 D 717231 CDS YP_004603978.1 336324011 10816087 1890703..1891086 1 NC_015672.1 PFAM: Protein of unknown function, DUF583; COGs: COG0149 Triosephosphate isomerase; InterPro IPR000652; KEGG: cni:Calni_1303 triosephosphate isomerase; PFAM: Triosephosphate isomerase; PRIAM: Triose-phosphate isomerase; SPTR: Triosephosphate isomerase; TIGRFAM: Triosephosphate isomerase; hypothetical protein 1891086 10816087 Flexsi_1770 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603978.1 1890703 D 717231 CDS YP_004603979.1 336324012 10816088 1891083..1891847 1 NC_015672.1 PFAM: Triosephosphate isomerase; TIGRFAM: triosephosphate isomerase; COGs: COG1314 Preprotein translocase subunit SecG; InterPro IPR004692; KEGG: cni:Calni_0863 preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit; SPTR: Preprotein translocase, SecG subunit; TIGRFAM: Preprotein translocase SecG subunit; triosephosphate isomerase 1891847 10816088 Flexsi_1771 Flexistipes sinusarabici DSM 4947 triosephosphate isomerase YP_004603979.1 1891083 D 717231 CDS YP_004603980.1 336324013 10816089 1891857..1892174 1 NC_015672.1 PFAM: Preprotein translocase SecG subunit; TIGRFAM: protein translocase, SecG subunit; COGs: COG0747 ABC-type dipeptide transport system periplasmic component; InterPro IPR000914; KEGG: ddf:DEFDS_0131 peptide/nickel ABC transporter substrate-binding protein; PFAM: Bacterial extracellular solute-binding protein, family 5; SPTR: Peptide/nickel ABC transporter, substrate-binding protein; preprotein translocase subunit SecG 1892174 10816089 Flexsi_1772 Flexistipes sinusarabici DSM 4947 preprotein translocase subunit SecG YP_004603980.1 1891857 D 717231 CDS YP_004603981.1 336324014 10816090 1892177..1893841 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding proteins, family 5 Middle; COGs: COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: ddf:DEFDS_0132 peptide/nickel ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Peptide/nickel ABC transporter, permease; ABC transporter periplasmic protein 1893841 10816090 Flexsi_1773 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic protein YP_004603981.1 1892177 D 717231 CDS YP_004603982.1 336324015 10816091 1893982..1894962 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems permease components; InterPro IPR000515; KEGG: dap:Dacet_2982 binding-protein-dependent transport systems inner membrane component; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Binding-protein-dependent transport systems inner membrane component; ABC transporter 1894962 10816091 Flexsi_1774 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603982.1 1893982 D 717231 CDS YP_004603983.1 336324016 10816092 1894949..1895788 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0702 nucleoside-diphosphate-sugar epimerase; InterPro IPR001509; KEGG: cni:Calni_0358 nad-dependent epimerase/dehydratase; PFAM: NAD-dependent epimerase/dehydratase; SPTR: NAD-dependent epimerase/dehydratase; ABC transporter 1895788 10816092 Flexsi_1775 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004603983.1 1894949 D 717231 CDS YP_004603984.1 336324017 10816093 complement(1895796..1896689) 1 NC_015672.1 PFAM: NAD dependent epimerase/dehydratase family; COGs: COG2003 DNA repair protein; InterPro IPR001405; KEGG: dap:Dacet_2445 DNA repair protein RadC; PFAM: DNA repair, RadC-like; SPTR: DNA repair protein RadC; TIGRFAM: DNA repair, RadC-like; manually curated; NAD-dependent epimerase/dehydratase 1896689 10816093 Flexsi_1776 Flexistipes sinusarabici DSM 4947 NAD-dependent epimerase/dehydratase YP_004603984.1 1895796 R 717231 CDS YP_004603985.1 336324018 10816094 complement(1896725..1897390) 1 NC_015672.1 PFAM: Protein of unknown function (DUF2466); TIGRFAM: DNA repair protein radc; manually curated; DNA repair protein RadC 1897390 10816094 Flexsi_1777 Flexistipes sinusarabici DSM 4947 DNA repair protein RadC YP_004603985.1 1896725 R 717231 CDS YP_004603986.1 336324019 10816096 1898949..1899566 1 NC_015672.1 KEGG: kol:Kole_0062 DNA methylase N-4/N-6 domain protein; SPTR: Methyltransferase; hypothetical protein 1899566 10816096 Flexsi_1779 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603986.1 1898949 D 717231 CDS YP_004603987.1 336324020 10816097 1899667..1899885 1 NC_015672.1 PFAM: Type III restriction/modification enzyme methylation subunit; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; DNA methylase N-4/N-6 domain-containing protein 1899885 10816097 Flexsi_1780 Flexistipes sinusarabici DSM 4947 DNA methylase N-4/N-6 domain-containing protein YP_004603987.1 1899667 D 717231 CDS YP_004603988.1 336324021 10816098 complement(1900049..1901098) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); manually curated; transposase IS4 family protein 1901098 10816098 Flexsi_1781 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004603988.1 1900049 R 717231 CDS YP_004603989.1 336324022 10816100 1902986..1905544 1 NC_015672.1 PFAM: Type III restriction enzyme, res subunit; KEGG: bhy:BHWA1_00405 type II restriction-modification enzyme; SPTR: Type II restriction-modification enzyme; type III site-specific deoxyribonuclease 1905544 10816100 Flexsi_1783 Flexistipes sinusarabici DSM 4947 type III site-specific deoxyribonuclease YP_004603989.1 1902986 D 717231 CDS YP_004603990.1 336324023 10816101 1905905..1906684 1 NC_015672.1 KEGG: mta:Moth_0637 hypothetical protein; SPTR: Putative uncharacterized protein; type II restriction-modification enzyme 1906684 10816101 Flexsi_1784 Flexistipes sinusarabici DSM 4947 type II restriction-modification enzyme YP_004603990.1 1905905 D 717231 CDS YP_004603991.1 336324024 10816102 complement(1906611..1907282) 1 NC_015672.1 KEGG: shc:Shell_0165 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1907282 10816102 Flexsi_1785 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603991.1 1906611 R 717231 CDS YP_004603992.1 336324025 10816103 complement(1907462..1908667) 1 NC_015672.1 KEGG: sbm:Shew185_3249 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1908667 10816103 Flexsi_1786 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603992.1 1907462 R 717231 CDS YP_004603993.1 336324026 10816104 complement(1908725..1909429) 1 NC_015672.1 KEGG: gvi:glr4337 hypothetical protein; SPTR: Glr4337 protein; hypothetical protein 1909429 10816104 Flexsi_1787 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603993.1 1908725 R 717231 CDS YP_004603994.1 336324027 10816105 complement(1909629..1910414) 1 NC_015672.1 PFAM: Protein of unknwon function (DUF2893); COGs: COG0489 ATPase involved in chromosome partitioning; InterPro IPR019591; KEGG: ddf:DEFDS_1268 ATP-binding protein, CobQ/CobB/MinD/ParA family; PFAM: ATPase-like, ParA/MinD; SPTR: ATP-binding protein, CobQ/CobB/MinD/ParA family; hypothetical protein 1910414 10816105 Flexsi_1788 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603994.1 1909629 R 717231 CDS YP_004603995.1 336324028 10816106 1910940..1911821 1 NC_015672.1 PFAM: ParA/MinD ATPase like; Anion-transporting ATPase; TIGRFAM: YgiT-type zinc finger domain; COGs: COG1038 Pyruvate carboxylase; InterProIPR005481:IPR005479:IPR005482:IPR000891:IPR 003379:IPR000089:IPR005930; KEGG: cni:Calni_0495 pyruvate carboxylase; PFAM: Conserved carboxylase region; Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; Pyruvate carboxyltransferase; Biotin/lipoyl attachment; PRIAM: Pyruvate carboxylase; SPTR: Pyruvate carboxylase; TIGRFAM: Pyruvate carboxylase; ParA/MinD ATPase-like protein 1911821 10816106 Flexsi_1789 Flexistipes sinusarabici DSM 4947 ParA/MinD ATPase-like protein YP_004603995.1 1910940 D 717231 CDS YP_004603996.1 336324029 10816107 1912321..1915755 1 NC_015672.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; HMGL-like; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; Biotin-requiring enzyme; Conserved carboxylase domain; TIGRFAM: pyruvate carboxylase; COGs: COG0301 Thiamine biosynthesis ATP pyrophosphatase; HAMAP: Thiamine biosynthesis protein; InterPro IPR004114:IPR020536:IPR003720; KEGG: ddf:DEFDS_1945 thiamine biosynthesis protein ThiI; PFAM: Thiamine biosynthesis protein, C-terminal; THUMP; SPTR: Probable tRNA sulfurtransferase; TIGRFAM: Thiamine biosynthesis protein; pyruvate carboxylase 1915755 10816107 Flexsi_1790 Flexistipes sinusarabici DSM 4947 pyruvate carboxylase YP_004603996.1 1912321 D 717231 CDS YP_004603997.1 336324030 10816108 complement(1915807..1916964) 1 NC_015672.1 PFAM: Thiamine biosynthesis protein (ThiI); THUMP domain; TIGRFAM: thiazole biosynthesis/tRNA modification protein ThiI; COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ddf:DEFDS_1944 aminotransferase class V; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Aminotransferase, class V; tRNA sulfurtransferase 1916964 10816108 Flexsi_1791 Flexistipes sinusarabici DSM 4947 tRNA sulfurtransferase YP_004603997.1 1915807 R 717231 CDS YP_004603998.1 336324031 10816109 complement(1916964..1918070) 1 NC_015672.1 PFAM: Aminotransferase class-V; KEGG: dap:Dacet_0519 hypothetical protein; SPTR: Putative uncharacterized protein; cysteine desulfurase 1918070 10816109 Flexsi_1792 Flexistipes sinusarabici DSM 4947 cysteine desulfurase YP_004603998.1 1916964 R 717231 CDS YP_004603999.1 336324032 10816110 complement(1918074..1918337) 1 NC_015672.1 COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006657; KEGG: ddf:DEFDS_1943 hypothetical protein; PFAM: Molydopterin dinucleotide-binding region; SPTR: Putative uncharacterized protein; hypothetical protein 1918337 10816110 Flexsi_1793 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004603999.1 1918074 R 717231 CDS YP_004604000.1 336324033 10816111 complement(1918330..1920003) 1 NC_015672.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; COGs: COG1117 ABC-type phosphate transport system ATPase component; InterPro IPR003593:IPR003439:IPR005670; KEGG: drt:Dret_0469 phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter-like; PRIAM: Phosphate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Phosphate ABC transporter, ATPase subunit; TIGRFAM: Phosphate transport system permease protein 1; molybdopterin dinucleotide-binding region 1920003 10816111 Flexsi_1794 Flexistipes sinusarabici DSM 4947 molybdopterin dinucleotide-binding region YP_004604000.1 1918330 R 717231 CDS YP_004604001.1 336324034 10816112 complement(1920228..1920992) 1 NC_015672.1 PFAM: ABC transporter; TIGRFAM: phosphate ABC transporter, ATP-binding protein; COGs: COG0581 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR005672; KEGG: drt:Dret_0466 phosphate ABC transporter, inner membrane subunit PstA; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter, inner membrane subunit PstA; TIGRFAM: Phosphate transport system permease protein 2; phosphate ABC transporter ATPase 1920992 10816112 Flexsi_1795 Flexistipes sinusarabici DSM 4947 phosphate ABC transporter ATPase YP_004604001.1 1920228 R 717231 CDS YP_004604002.1 336324035 10816113 complement(1921023..1922186) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; Domain of unknown function (DUF3333); TIGRFAM: phosphate ABC transporter, permease protein PstA; COGs: COG0573 ABC-type phosphate transport system permease component; InterPro IPR000515:IPR011864; KEGG: cch:Cag_0500 phosphate ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Phosphate ABC transporter membrane protein 1, PhoT family; TIGRFAM: Phosphate ABC transporter, permease protein PstC; phosphate ABC transporter permease 1922186 10816113 Flexsi_1796 Flexistipes sinusarabici DSM 4947 phosphate ABC transporter permease YP_004604002.1 1921023 R 717231 CDS YP_004604003.1 336324036 10816114 complement(1922198..1923442) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; Phosphate ATP-binding cassette transporter; TIGRFAM: phosphate ABC transporter, permease protein PstC; COGs: COG0226 ABC-type phosphate transport system periplasmic component; KEGG: drt:Dret_0464 periplasmic phosphate binding protein; SPTR: Periplasmic phosphate binding protein; phosphate ABC transporter permease 1923442 10816114 Flexsi_1797 Flexistipes sinusarabici DSM 4947 phosphate ABC transporter permease YP_004604003.1 1922198 R 717231 CDS YP_004604004.1 336324037 10816115 complement(1923511..1924524) 1 NC_015672.1 COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: ddf:DEFDS_1239 polar amino acid ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, permease; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; phosphate binding protein 1924524 10816115 Flexsi_1798 Flexistipes sinusarabici DSM 4947 phosphate binding protein YP_004604004.1 1923511 R 717231 CDS YP_004604005.1 336324038 10816116 complement(1924652..1925524) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR001638:IPR001320; KEGG: ddf:DEFDS_1238 polar amino acid ABC transporter substrate-binding protein; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; Ionotropic glutamate receptor; SPTR: Polar amino acid ABC transporter, substrate-binding protein; polar amino acid ABC transporter inner membrane subunit 1925524 10816116 Flexsi_1799 Flexistipes sinusarabici DSM 4947 polar amino acid ABC transporter inner membrane subunit YP_004604005.1 1924652 R 717231 CDS YP_004604006.1 336324039 10816117 complement(1925535..1926362) 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR000515:IPR010065; KEGG: drt:Dret_0475 polar amino acid ABC transporter, inner membrane subunit; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Polar amino acid ABC transporter, inner membrane subunit; TIGRFAM: Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; manually curated; ABC transporter periplasmic subunit 1926362 10816117 Flexsi_1800 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic subunit YP_004604006.1 1925535 R 717231 CDS YP_004604007.1 336324040 10816118 complement(1926378..1927151) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; COGs: COG0812 UDP-N-acetylmuramate dehydrogenase; HAMAP: UDP-N-acetylenolpyruvoylglucosamine reductase; InterPro IPR006094:IPR011601:IPR003170; KEGG: cni:Calni_0129 UDP-N-acetylenolpyruvoylglucosamine reductase; PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal; FAD linked oxidase, N-terminal; PRIAM: UDP-N-acetylmuramate dehydrogenase; SPTR: UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; polar amino acid ABC transporter inner membrane subunit 1927151 10816118 Flexsi_1801 Flexistipes sinusarabici DSM 4947 polar amino acid ABC transporter inner membrane subunit YP_004604007.1 1926378 R 717231 CDS YP_004604008.1 336324041 10816119 complement(1927306..1928166) 1 NC_015672.1 PFAM: FAD binding domain; UDP-N-acetylenolpyruvoylglucosamine reductase, C-terminal domain; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase; COGs: COG0005 Purine nucleoside phosphorylase; InterPro IPR000845; KEGG: dap:Dacet_0477 purine or other phosphorylase family 1; PFAM: Nucleoside phosphorylase; PRIAM: S-methyl-5'-thioadenosine phosphorylase; SPTR: Purine or other phosphorylase family 1; UDP-N-acetylenolpyruvoylglucosamine reductase 1928166 10816119 Flexsi_1802 Flexistipes sinusarabici DSM 4947 UDP-N-acetylenolpyruvoylglucosamine reductase YP_004604008.1 1927306 R 717231 CDS YP_004604009.1 336324042 10816120 complement(1928163..1928957) 1 NC_015672.1 PFAM: Phosphorylase superfamily; TIGRFAM: 5'-deoxy-5'-methylthioadenosine phosphorylase; COGs: COG2860 membrane protein; InterPro IPR005115; KEGG: ddf:DEFDS_0473 hypothetical protein; PFAM: Uncharacterised protein family UPF0126; SPTR: Putative uncharacterized protein; S-methyl-5'-thioadenosine phosphorylase 1928957 10816120 Flexsi_1803 Flexistipes sinusarabici DSM 4947 S-methyl-5'-thioadenosine phosphorylase YP_004604009.1 1928163 R 717231 CDS YP_004604010.1 336324043 10816121 complement(1929286..1929945) 1 NC_015672.1 PFAM: UPF0126 domain; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: dap:Dacet_0476 ABC transporter related protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; hypothetical protein 1929945 10816121 Flexsi_1804 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604010.1 1929286 R 717231 CDS YP_004604011.1 336324044 10816122 complement(1929893..1930558) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838:IPR011925; KEGG: ddf:DEFDS_0471 lipoprotein-releasing system permease protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Lipoprotein-releasing system permease protein; TIGRFAM: Lipoprotein releasing system, transmembrane protein, LolC/E family; phosphonate-transporting ATPase 1930558 10816122 Flexsi_1805 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004604011.1 1929893 R 717231 CDS YP_004604012.1 336324045 10816123 complement(1930555..1931784) 1 NC_015672.1 PFAM: Predicted permease; TIGRFAM: lipoprotein releasing system, transmembrane protein, LolC/E family; COGs: COG0519 GMP synthase PP-ATPase domain/subunit; HAMAP: GMP synthase [glutamine-hydrolyzing]; InterPro IPR000991:IPR018318:IPR001674:IPR004739; KEGG: cni:Calni_0134 gmp synthase (glutamine-hydrolyzing); PFAM: GMP synthase, C-terminal; Glutamine amidotransferase class-I, C-terminal; tRNA methyl transferase-like; PRIAM: GMP synthase (glutamine-hydrolyzing); SPTR: GMP synthase [glutamine-hydrolyzing]; TIGRFAM: GMP synthase, C-terminal; GMP synthase, N-terminal; lipoprotein releasing system transmembrane protein LolC/E family 1931784 10816123 Flexsi_1806 Flexistipes sinusarabici DSM 4947 lipoprotein releasing system transmembrane protein LolC/E family YP_004604012.1 1930555 R 717231 CDS YP_004604013.1 336324046 10816124 complement(1931794..1933344) 1 NC_015672.1 PFAM: Glutamine amidotransferase class-I; GMP synthase C terminal domain; Asparagine synthase; TIGRFAM: GMP synthase (glutamine-hydrolyzing), C-terminal domain or B subunit; GMP synthase (glutamine-hydrolyzing), N-terminal domain or A subunit; COGs: COG0516 IMP dehydrogenase/GMP reductase; InterPro IPR000644:IPR001093:IPR005990; KEGG: ddf:DEFDS_0469 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; Cystathionine beta-synthase, core; PRIAM: IMP dehydrogenase; SMART: Cystathionine beta-synthase, core; SPTR: Inosine-5'-monophosphate dehydrogenase; TIGRFAM: IMP dehydrogenase; GMP synthase 1933344 10816124 Flexsi_1807 Flexistipes sinusarabici DSM 4947 GMP synthase YP_004604013.1 1931794 R 717231 CDS YP_004604014.1 336324047 10816125 complement(1933372..1934841) 1 NC_015672.1 PFAM: CBS domain; IMP dehydrogenase / GMP reductase domain; TIGRFAM: inosine-5'-monophosphate dehydrogenase; COGs: COG0171 NAD synthase; HAMAP: NH(3)-dependent NAD(+) synthetase; InterPro IPR003694; KEGG: cni:Calni_0136 nh(3)-dependent nad(+) synthetase; PFAM: NAD+ synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthase; inosine-5'-monophosphate dehydrogenase 1934841 10816125 Flexsi_1808 Flexistipes sinusarabici DSM 4947 inosine-5'-monophosphate dehydrogenase YP_004604014.1 1933372 R 717231 CDS YP_004604015.1 336324048 10816126 complement(1934986..1935801) 1 NC_015672.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; COGs: COG0388 amidohydrolase; InterPro IPR003010; KEGG: ddf:DEFDS_0467 hydrolase carbon-nitrogen family; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; SPTR: Hydrolase, carbon-nitrogen family; NH(3)-dependent NAD(+) synthetase 1935801 10816126 Flexsi_1809 Flexistipes sinusarabici DSM 4947 NH(3)-dependent NAD(+) synthetase YP_004604015.1 1934986 R 717231 CDS YP_004604016.1 336324049 10816127 complement(1935809..1936639) 1 NC_015672.1 PFAM: Carbon-nitrogen hydrolase; COGs: COG0315 Molybdenum cofactor biosynthesis enzyme; InterPro IPR002820; KEGG: ddf:DEFDS_0466 molybdenum cofactor biosynthesis protein C; PFAM: Molybdopterin cofactor biosynthesis MoaC region; SPTR: Molybdenum cofactor biosynthesis protein C; TIGRFAM: Molybdopterin cofactor biosynthesis MoaC region; nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase 1936639 10816127 Flexsi_1810 Flexistipes sinusarabici DSM 4947 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004604016.1 1935809 R 717231 CDS YP_004604017.1 336324050 10816128 complement(1936641..1937117) 1 NC_015672.1 PFAM: MoaC family; TIGRFAM: molybdenum cofactor biosynthesis protein MoaC; InterPro IPR003646:IPR013247; KEGG: ddf:DEFDS_0465 hypothetical protein; PFAM: SH3, type 3; SMART: Bacterial SH3-like region; SPTR: Putative uncharacterized protein; molybdenum cofactor biosynthesis protein C 1937117 10816128 Flexsi_1811 Flexistipes sinusarabici DSM 4947 molybdenum cofactor biosynthesis protein C YP_004604017.1 1936641 R 717231 CDS YP_004604018.1 336324051 10816129 complement(1937128..1937907) 1 NC_015672.1 PFAM: Bacterial SH3 domain; COGs: COG0012 GTPase probable translation factor; InterPro IPR002917:IPR013029:IPR004396; KEGG: ddf:DEFDS_0464 GTP-binding protein; PFAM: Protein of unknown function DUF933; GTP-binding protein, HSR1-related; SPTR: GTP-binding protein; TIGRFAM: Conserved hypothetical protein CHP00092; SH3 type 3 domain-containing protein 1937907 10816129 Flexsi_1812 Flexistipes sinusarabici DSM 4947 SH3 type 3 domain-containing protein YP_004604018.1 1937128 R 717231 CDS YP_004604019.1 336324052 10816130 complement(1937900..1938991) 1 NC_015672.1 PFAM: GTPase of unknown function; Protein of unknown function (DUF933); TIGRFAM: GTP-binding protein YchF; COGs: COG3808 Inorganic pyrophosphatase; HAMAP: Pyrophosphate-energized proton pump; InterPro IPR004131; KEGG: ddf:DEFDS_0463 V-type H(+)-translocating pyrophosphatase; PFAM: Inorganic H+ pyrophosphatase; PRIAM: Inorganic diphosphatase; SPTR: Putative K(+)-stimulated pyrophosphate-energized sodium pump; TIGRFAM: Inorganic H+ pyrophosphatase; GTP-binding protein YchF 1938991 10816130 Flexsi_1813 Flexistipes sinusarabici DSM 4947 GTP-binding protein YchF YP_004604019.1 1937900 R 717231 CDS YP_004604020.1 336324053 10816131 complement(1939097..1941115) 1 NC_015672.1 PFAM: Inorganic H+ pyrophosphatase; TIGRFAM: vacuolar-type H(+)-translocating pyrophosphatase; COGs: COG0193 Peptidyl-tRNA hydrolase; HAMAP: Peptidyl-tRNA hydrolase; InterPro IPR001328; KEGG: cni:Calni_0240 peptidyl-tRNA hydrolase; PFAM: Peptidyl-tRNA hydrolase; PRIAM: Aminoacyl-tRNA hydrolase; SPTR: Peptidyl-tRNA hydrolase; TIGRFAM: Peptidyl-tRNA hydrolase; pyrophosphate-energized proton pump 1941115 10816131 Flexsi_1814 Flexistipes sinusarabici DSM 4947 pyrophosphate-energized proton pump YP_004604020.1 1939097 R 717231 CDS YP_004604021.1 336324054 10816132 complement(1941119..1941709) 1 NC_015672.1 PFAM: Peptidyl-tRNA hydrolase; TIGRFAM: peptidyl-tRNA hydrolase; COGs: COG0462 Phosphoribosylpyrophosphate synthetase; InterPro IPR000836:IPR005946; KEGG: ddf:DEFDS_0461 ribose-phosphate pyrophosphokinase; PFAM: Phosphoribosyltransferase; PRIAM: Ribose-phosphate diphosphokinase; SPTR: Ribose-phosphate pyrophosphokinase; TIGRFAM: Phosphoribosyl pyrophosphokinase; peptidyl-tRNA hydrolase 1941709 10816132 Flexsi_1815 Flexistipes sinusarabici DSM 4947 peptidyl-tRNA hydrolase YP_004604021.1 1941119 R 717231 CDS YP_004604022.1 336324055 10816133 complement(1941710..1942666) 1 NC_015672.1 PFAM: Phosphoribosyl transferase domain; TIGRFAM: ribose-phosphate pyrophosphokinase; COGs: COG1947 4-diphosphocytidyl-2C-methyl-D-erythritol 2-phosphate synthase; HAMAP: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; InterPro IPR006204:IPR013750:IPR004424; KEGG: ddf:DEFDS_0460 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase, C-terminal; SPTR: 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; ribose-phosphate pyrophosphokinase 1942666 10816133 Flexsi_1816 Flexistipes sinusarabici DSM 4947 ribose-phosphate pyrophosphokinase YP_004604022.1 1941710 R 717231 CDS YP_004604023.1 336324056 10816134 complement(1942678..1943523) 1 NC_015672.1 PFAM: GHMP kinases C terminal; GHMP kinases N terminal domain; TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: dap:Dacet_0068 hypothetical protein; SPTR: Putative uncharacterized protein; 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase 1943523 10816134 Flexsi_1817 Flexistipes sinusarabici DSM 4947 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase YP_004604023.1 1942678 R 717231 CDS YP_004604024.1 336324057 10816135 complement(1943563..1944180) 1 NC_015672.1 InterPro IPR019734:IPR001440:IPR013105; KEGG: cni:Calni_0236 tetratricopeptide tpr_1 repeat-containing protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Tetratricopeptide TPR_1 repeat-containing protein; hypothetical protein 1944180 10816135 Flexsi_1818 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604024.1 1943563 R 717231 CDS YP_004604025.1 336324058 10816136 complement(1944158..1945792) 1 NC_015672.1 PFAM: Tetratricopeptide repeat; COGs: COG4770 Acetyl/propionyl-CoA carboxylase alpha subunit; InterPro IPR005481:IPR005479:IPR005482:IPR004549; KEGG: ddf:DEFDS_0457 acetyl-CoA carboxylase biotin carboxylase subunit; PFAM: Carbamoyl phosphate synthetase, large subunit, ATP-binding; Carbamoyl phosphate synthase, large subunit, N-terminal; Biotin carboxylase, C-terminal; PRIAM: Pyruvate carboxylase; SPTR: Acetyl-CoA carboxylase, biotin carboxylase subunit; TIGRFAM: Acetyl-CoA carboxylase, biotin carboxylase; hypothetical protein 1945792 10816136 Flexsi_1819 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604025.1 1944158 R 717231 CDS YP_004604026.1 336324059 10816137 complement(1945800..1947140) 1 NC_015672.1 PFAM: Carbamoyl-phosphate synthase L chain, ATP binding domain; Biotin carboxylase C-terminal domain; Carbamoyl-phosphate synthase L chain, N-terminal domain; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase subunit; COGs: COG0511 Biotin carboxyl carrier protein; InterPro IPR000089:IPR001249; KEGG: ddf:DEFDS_0456 acetyl-CoA carboxylase biotin carboxyl carrier protein; PFAM: Biotin/lipoyl attachment; SPTR: Acetyl-CoA carboxylase, biotin carboxyl carrier protein; TIGRFAM: Acetyl-CoA biotin carboxyl carrier; acetyl-CoA carboxylase, biotin carboxylase 1947140 10816137 Flexsi_1820 Flexistipes sinusarabici DSM 4947 acetyl-CoA carboxylase, biotin carboxylase YP_004604026.1 1945800 R 717231 CDS YP_004604027.1 336324060 10816138 complement(1947160..1947624) 1 NC_015672.1 PFAM: Biotin-requiring enzyme; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; COGs: COG0231 Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A); HAMAP: Translation elongation factor P; InterPro IPR013185:IPR001059:IPR015365:IPR011768; KEGG: cni:Calni_0233 translation elongation factor P; PFAM: Elongation factor P, C-terminal; Translation elongation factor, KOW-like; Translation elongation factor P/YeiP, central; SPTR: Elongation factor P; TIGRFAM: Translation elongation factor P; acetyl-CoA carboxylase, biotin carboxyl carrier protein 1947624 10816138 Flexsi_1821 Flexistipes sinusarabici DSM 4947 acetyl-CoA carboxylase, biotin carboxyl carrier protein YP_004604027.1 1947160 R 717231 CDS YP_004604028.1 336324061 10816139 complement(1947634..1948206) 1 NC_015672.1 PFAM: Elongation factor P, C-terminal; Elongation factor P (EF-P) KOW-like domain; Elongation factor P (EF-P) OB domain; TIGRFAM: translation elongation factor P; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: ddf:DEFDS_0454 X-Pro dipeptidase; PFAM: Peptidase M24, structural domain; Creatinase; SPTR: X-Pro dipeptidase; elongation factor P 1948206 10816139 Flexsi_1822 Flexistipes sinusarabici DSM 4947 elongation factor P YP_004604028.1 1947634 R 717231 CDS YP_004604029.1 336324062 10816140 complement(1948215..1949267) 1 NC_015672.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0757 3-dehydroquinate dehydratase II; HAMAP: Dehydroquinase, class II; InterPro IPR001874; KEGG: ddf:DEFDS_0453 3-dehydroquinate dehydratase II; PFAM: Dehydroquinase, class II; PRIAM: 3-dehydroquinate dehydratase; SPTR: 3-dehydroquinate dehydratase II; TIGRFAM: Dehydroquinase, class II; peptidase M24 1949267 10816140 Flexsi_1823 Flexistipes sinusarabici DSM 4947 peptidase M24 YP_004604029.1 1948215 R 717231 CDS YP_004604030.1 336324063 10816141 complement(1949287..1949718) 1 NC_015672.1 PFAM: Dehydroquinase class II; TIGRFAM: 3-dehydroquinate dehydratase, type II; InterPro IPR004942; KEGG: ddf:DEFDS_0452 hypothetical protein; PFAM: Dynein light chain-related; SPTR: Putative uncharacterized protein; 3-dehydroquinate dehydratase 1949718 10816141 Flexsi_1824 Flexistipes sinusarabici DSM 4947 3-dehydroquinate dehydratase YP_004604030.1 1949287 R 717231 CDS YP_004604031.1 336324064 10816142 complement(1949719..1950075) 1 NC_015672.1 PFAM: Roadblock/LC7 domain; InterPro IPR019734:IPR001440:IPR013105; KEGG: ddf:DEFDS_0451 hypothetical protein; PFAM: Tetratricopeptide TPR2; Tetratricopeptide TPR-1; SPTR: Putative uncharacterized protein; Roadblock/LC7 family protein 1950075 10816142 Flexsi_1825 Flexistipes sinusarabici DSM 4947 Roadblock/LC7 family protein YP_004604031.1 1949719 R 717231 CDS YP_004604032.1 336324065 10816143 complement(1950068..1951063) 1 NC_015672.1 COGs: COG0337 3-dehydroquinate synthetase; HAMAP: 3-dehydroquinate synthase; InterPro IPR002658:IPR016037; KEGG: cni:Calni_0228 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase AroB; PRIAM: 3-dehydroquinate synthase; SPTR: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase AroB, subgroup; hypothetical protein 1951063 10816143 Flexsi_1826 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604032.1 1950068 R 717231 CDS YP_004604033.1 336324066 10816144 complement(1951119..1952165) 1 NC_015672.1 PFAM: 3-dehydroquinate synthase; TIGRFAM: 3-dehydroquinate synthase; COGs: COG0703 Shikimate kinase; HAMAP: Shikimate kinase; InterPro IPR000623; KEGG: ddf:DEFDS_0449 shikimate kinase; PFAM: Shikimate kinase; PRIAM: Shikimate kinase; SPTR: Shikimate kinase; 3-dehydroquinate synthase 1952165 10816144 Flexsi_1827 Flexistipes sinusarabici DSM 4947 3-dehydroquinate synthase YP_004604033.1 1951119 R 717231 CDS YP_004604034.1 336324067 10816145 complement(1952158..1952661) 1 NC_015672.1 PFAM: Shikimate kinase; COGs: COG0744 Membrane carboxypeptidase (penicillin-binding protein); InterPro IPR001460; KEGG: ddf:DEFDS_0448 hypothetical protein; PFAM: Penicillin-binding protein, transpeptidase; PRIAM: Peptidoglycan glycosyltransferase; SPTR: Putative uncharacterized protein; shikimate kinase 1952661 10816145 Flexsi_1828 Flexistipes sinusarabici DSM 4947 shikimate kinase YP_004604034.1 1952158 R 717231 CDS YP_004604035.1 336324068 10816146 complement(1952682..1954394) 1 NC_015672.1 PFAM: Penicillin binding protein transpeptidase domain; Transglycosylase; COGs: COG0127 Xanthosine triphosphate pyrophosphatase; HAMAP: Nucleoside-triphosphatase rdgB; InterPro IPR002637; KEGG: ddf:DEFDS_0447 nucleoside-triphosphatase; PFAM: Ham1-like protein; PRIAM: Nucleoside-triphosphatase; SPTR: Nucleoside-triphosphatase; TIGRFAM: Ham1-like protein; peptidoglycan glycosyltransferase 1954394 10816146 Flexsi_1829 Flexistipes sinusarabici DSM 4947 peptidoglycan glycosyltransferase YP_004604035.1 1952682 R 717231 CDS YP_004604036.1 336324069 10816147 complement(1954384..1954986) 1 NC_015672.1 PFAM: Ham1 family; TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; COGs: COG0689 RNase PH; HAMAP: Ribonuclease phosphorolytic, bacterial-type; InterPro IPR001247:IPR015847:IPR002381; KEGG: ddf:DEFDS_0446 tRNA nucleotidyltransferase; PFAM: Exoribonuclease, phosphorolytic domain 1; Exoribonuclease, phosphorolytic domain 2; PRIAM: tRNA nucleotidyltransferase; SPTR: Ribonuclease PH; TIGRFAM: Ribonuclease phosphorolytic, bacterial-type; nucleoside-triphosphatase rdgB 1954986 10816147 Flexsi_1830 Flexistipes sinusarabici DSM 4947 nucleoside-triphosphatase rdgB YP_004604036.1 1954384 R 717231 CDS YP_004604037.1 336324070 10816148 complement(1954988..1955704) 1 NC_015672.1 PFAM: 3' exoribonuclease family, domain 1; 3' exoribonuclease family, domain 2; TIGRFAM: ribonuclease PH; InterPro IPR007712:IPR012753; KEGG: sde:Sde_2750 hypothetical protein; PFAM: Plasmid stabilisation system; SPTR: Plasmid stabilization system protein; TIGRFAM: Addiction module toxin, RelE/StbE; ribonuclease PH 1955704 10816148 Flexsi_1831 Flexistipes sinusarabici DSM 4947 ribonuclease PH YP_004604037.1 1954988 R 717231 CDS YP_004604038.1 336324071 10816149 complement(1955841..1956164) 1 NC_015672.1 PFAM: Plasmid stabilisation system protein; InterPro IPR003756:IPR006442; KEGG: sde:Sde_2751 ATPase; SPTR: Putative uncharacterized protein; TIGRFAM: Prevent-host-death protein; RelE/StbE family addiction module toxin 1956164 10816149 Flexsi_1832 Flexistipes sinusarabici DSM 4947 RelE/StbE family addiction module toxin YP_004604038.1 1955841 R 717231 CDS YP_004604039.1 336324072 10816150 complement(1956164..1956439) 1 NC_015672.1 PFAM: Phd_YefM; TIGRFAM: prevent-host-death family protein; COGs: COG0606 ATPase with chaperone activity; InterPro IPR003593:IPR000523:IPR004482; KEGG: ddf:DEFDS_2092 Mg chelatase-related protein; PFAM: Magnesium chelatase, ChlI subunit; SMART: ATPase, AAA+ type, core; SPTR: Mg chelatase-related protein; TIGRFAM: Mg chelatase-related protein; prevent-host-death family protein 1956439 10816150 Flexsi_1833 Flexistipes sinusarabici DSM 4947 prevent-host-death family protein YP_004604039.1 1956164 R 717231 CDS YP_004604040.1 336324073 10816151 complement(1956749..1958272) 1 NC_015672.1 PFAM: Magnesium chelatase, subunit ChlI; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: Mg chelatase-related protein; COGs: COG0616 Periplasmic serine protease (ClpP class); InterPro IPR002142:IPR004635; KEGG: ddf:DEFDS_2093 signal peptide peptidase SppA; PFAM: Peptidase S49; SPTR: Signal peptide peptidase SppA; TIGRFAM: Peptidase S49, SppA; sigma 54 interacting domain-containing protein 1958272 10816151 Flexsi_1834 Flexistipes sinusarabici DSM 4947 sigma 54 interacting domain-containing protein YP_004604040.1 1956749 R 717231 CDS YP_004604041.1 336324074 10816152 complement(1958346..1959218) 1 NC_015672.1 PFAM: Peptidase family S49; TIGRFAM: signal peptide peptidase SppA, 36K type; COGs: COG0530 Ca2+/Na+ antiporter; InterPro IPR004837; KEGG: ddf:DEFDS_2094 Ca2+:cation antiporter, CaCA family; PFAM: Sodium/calcium exchanger membrane region; SPTR: Ca2+:cation antiporter, CaCA family; signal peptide peptidase SppA, 36K type 1959218 10816152 Flexsi_1835 Flexistipes sinusarabici DSM 4947 signal peptide peptidase SppA, 36K type YP_004604041.1 1958346 R 717231 CDS YP_004604042.1 336324075 10816153 complement(1959231..1960205) 1 NC_015672.1 PFAM: Sodium/calcium exchanger protein; COGs: COG0539 Ribosomal protein S1; InterPro IPR003029; KEGG: dap:Dacet_2952 hydroxymethylbutenyl pyrophosphate reductase; PFAM: Ribosomal protein S1, RNA binding domain; SPTR: Hydroxymethylbutenyl pyrophosphate reductase; sodium/calcium exchanger membrane region 1960205 10816153 Flexsi_1836 Flexistipes sinusarabici DSM 4947 sodium/calcium exchanger membrane region YP_004604042.1 1959231 R 717231 CDS YP_004604043.1 336324076 10816154 complement(1960212..1961933) 1 NC_015672.1 PFAM: S1 RNA binding domain; TIGRFAM: ribosomal protein S1; COGs: COG0761 Penicillin tolerance protein; HAMAP: LytB protein; InterPro IPR003451; KEGG: ddf:DEFDS_2096 hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; PRIAM: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; SPTR: 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; TIGRFAM: LytB protein; RNA binding S1 domain-containing protein 1961933 10816154 Flexsi_1837 Flexistipes sinusarabici DSM 4947 RNA binding S1 domain-containing protein YP_004604043.1 1960212 R 717231 CDS YP_004604044.1 336324077 10816155 complement(1961914..1962768) 1 NC_015672.1 PFAM: LytB protein; TIGRFAM: (E)-4-hydroxy-3-methyl-but-2-enyl pyrophosphate reductase (IPP and DMAPP forming); COGs: COG0283 Cytidylate kinase; HAMAP: Cytidylate kinase; InterPro IPR000623:IPR011994:IPR003136; KEGG: cni:Calni_0093 cytidylate kinase; PFAM: Cytidylate kinase region; Shikimate kinase; SPTR: Cytidylate kinase; TIGRFAM: Cytidylate kinase; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 1962768 10816155 Flexsi_1838 Flexistipes sinusarabici DSM 4947 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_004604044.1 1961914 R 717231 CDS YP_004604045.1 336324078 10816156 complement(1962765..1963448) 1 NC_015672.1 PFAM: Cytidylate kinase; TIGRFAM: cytidylate kinase; COGs: COG0128 5-enolpyruvylshikimate-3-phosphate synthase; HAMAP: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; InterPro IPR001986:IPR006264; KEGG: cni:Calni_0092 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; PRIAM: 3-phosphoshikimate 1-carboxyvinyltransferase; SPTR: 3-phosphoshikimate 1-carboxyvinyltransferase; TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, subgroup; cytidylate kinase 1963448 10816156 Flexsi_1839 Flexistipes sinusarabici DSM 4947 cytidylate kinase YP_004604045.1 1962765 R 717231 CDS YP_004604046.1 336324079 10816157 complement(1963445..1964734) 1 NC_015672.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; COGs: COG0287 Prephenate dehydrogenase; InterPro IPR003099; KEGG: ddf:DEFDS_2099 prephenate dehydrogenase; PFAM: Prephenate dehydrogenase; PRIAM: Prephenate dehydrogenase; SPTR: Prephenate dehydrogenase; 3-phosphoshikimate 1-carboxyvinyltransferase 1964734 10816157 Flexsi_1840 Flexistipes sinusarabici DSM 4947 3-phosphoshikimate 1-carboxyvinyltransferase YP_004604046.1 1963445 R 717231 CDS YP_004604047.1 336324080 10816158 complement(1964721..1965551) 1 NC_015672.1 PFAM: Prephenate dehydrogenase; COGs: COG2876 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase; InterPro IPR006218:IPR006268; KEGG: ddf:DEFDS_2100 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA; PRIAM: 3-deoxy-7-phosphoheptulonate synthase; SPTR: 3-deoxy-7-phosphoheptulonate synthase; TIGRFAM: Phospho-2-dehydro-3-deoxyheptonate aldolase, subtype 2; prephenate dehydrogenase 1965551 10816158 Flexsi_1841 Flexistipes sinusarabici DSM 4947 prephenate dehydrogenase YP_004604047.1 1964721 R 717231 CDS YP_004604048.1 336324081 10816159 complement(1965551..1966570) 1 NC_015672.1 PFAM: DAHP synthetase I family; TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; COGs: COG0079 Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase; HAMAP: Histidinol-phosphate aminotransferase; InterPro IPR004839:IPR005861; KEGG: cni:Calni_0089 histidinol-phosphate aminotransferase; PFAM: Aminotransferase, class I/II; PRIAM: Histidinol-phosphate transaminase; SPTR: Histidinol-phosphate aminotransferase; TIGRFAM: Histidinol-phosphate aminotransferase; phospho-2-dehydro-3-deoxyheptonate aldolase 1966570 10816159 Flexsi_1842 Flexistipes sinusarabici DSM 4947 phospho-2-dehydro-3-deoxyheptonate aldolase YP_004604048.1 1965551 R 717231 CDS YP_004604049.1 336324082 10816160 complement(1966573..1967670) 1 NC_015672.1 PFAM: Aminotransferase class I and II; TIGRFAM: histidinol-phosphate aminotransferase; COGs: COG0077 Prephenate dehydratase; InterPro IPR020822:IPR001086:IPR002912:IPR010957; KEGG: cni:Calni_0088 chorismate mutase; prephenate dehydratase; PFAM: Prephenate dehydratase; Chorismate mutase, type II; Amino acid-binding ACT; SPTR: Chorismate mutase; prephenate dehydratase; TIGRFAM: Gamma/beta/epsilon proteobacterial P-protein, chorismate mutase domain; histidinol-phosphate aminotransferase 1967670 10816160 Flexsi_1843 Flexistipes sinusarabici DSM 4947 histidinol-phosphate aminotransferase YP_004604049.1 1966573 R 717231 CDS YP_004604050.1 336324083 10816161 complement(1967667..1968737) 1 NC_015672.1 PFAM: Prephenate dehydratase; ACT domain; Chorismate mutase type II; TIGRFAM: chorismate mutase domain of gram positive AroA protein; chorismate mutase domain of proteobacterial P-protein, clade 2; KEGG: cni:Calni_0584 hypothetical protein; SPTR: Putative uncharacterized protein; chorismate mutase 1968737 10816161 Flexsi_1844 Flexistipes sinusarabici DSM 4947 chorismate mutase YP_004604050.1 1967667 R 717231 CDS YP_004604051.1 336324084 10816162 1968911..1969411 1 NC_015672.1 PFAM: Sporulation and spore germination; COGs: COG0655 Multimeric flavodoxin WrbA; HAMAP: Flavoprotein wrbA; InterPro IPR008254:IPR010089; KEGG: glo:Glov_0105 TrpR binding protein WrbA; PFAM: Flavodoxin/nitric oxide synthase; SPTR: Flavoprotein wrbA; TIGRFAM: Flavoprotein WrbA; hypothetical protein 1969411 10816162 Flexsi_1845 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604051.1 1968911 D 717231 CDS YP_004604052.1 336324085 10816163 complement(1969450..1970064) 1 NC_015672.1 PFAM: NADPH-dependent FMN reductase; TIGRFAM: NAD(P)H:quinone oxidoreductase, type IV; COGs: COG1592 Rubrerythrin; InterPro IPR003251; KEGG: ddf:DEFDS_1568 rubrerythrin; PFAM: Rubrerythrin; SPTR: Rubrerythrin; flavoprotein WrbA 1970064 10816163 Flexsi_1846 Flexistipes sinusarabici DSM 4947 flavoprotein WrbA YP_004604052.1 1969450 R 717231 CDS YP_004604053.1 336324086 10816164 1970218..1970814 1 NC_015672.1 PFAM: Rubrerythrin; InterPro IPR000297; KEGG: cni:Calni_0648 ppic-type peptidyl-prolyl cis-trans isomerase; PFAM: Peptidyl-prolyl cis-trans isomerase, PpiC-type; SPTR: PpiC-type peptidyl-prolyl cis-trans isomerase; rubrerythrin 1970814 10816164 Flexsi_1847 Flexistipes sinusarabici DSM 4947 rubrerythrin YP_004604053.1 1970218 D 717231 CDS YP_004604054.1 336324087 10816165 complement(1970947..1971906) 1 NC_015672.1 PFAM: PPIC-type PPIASE domain; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; PpiC-type peptidyl-prolyl cis-trans isomerase 1971906 10816165 Flexsi_1848 Flexistipes sinusarabici DSM 4947 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004604054.1 1970947 R 717231 CDS YP_004604055.1 336324088 10816166 complement(1972005..1973324) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0704 Phosphate uptake regulator; InterPro IPR008170; KEGG: ddf:DEFDS_0404 phosphate transport system regulator; PFAM: PhoU; SPTR: Phosphate transport system regulator; TIGRFAM: PhoU; transposase IS4 family protein 1973324 10816166 Flexsi_1849 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604055.1 1972005 R 717231 CDS YP_004604056.1 336324089 10816167 1973788..1974483 1 NC_015672.1 PFAM: PhoU domain; TIGRFAM: phosphate transport system regulatory protein PhoU; COGs: COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain; InterPro IPR001789:IPR001867; KEGG: cni:Calni_1570 two component transcriptional regulator, winged helix family; PFAM: Signal transduction response regulator, receiver region; Signal transduction response regulator, C-terminal; SMART: Signal transduction response regulator, receiver region; SPTR: Two component transcriptional regulator, winged helix family; phosphate uptake regulator PhoU 1974483 10816167 Flexsi_1850 Flexistipes sinusarabici DSM 4947 phosphate uptake regulator PhoU YP_004604056.1 1973788 D 717231 CDS YP_004604057.1 336324090 10816168 1974476..1975147 1 NC_015672.1 PFAM: Response regulator receiver domain; Transcriptional regulatory protein, C terminal; COGs: COG5002 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: dap:Dacet_1228 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Integral membrane sensor signal transduction histidine kinase; winged helix family two component transcriptional regulator 1975147 10816168 Flexsi_1851 Flexistipes sinusarabici DSM 4947 winged helix family two component transcriptional regulator YP_004604057.1 1974476 D 717231 CDS YP_004604058.1 336324091 10816169 1975151..1976872 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG1893 Ketopantoate reductase; InterPro IPR013332:IPR013752:IPR000086:IPR003710; KEGG: ddf:DEFDS_2126 hypothetical protein; PFAM: Ketopantoate reductase ApbA/PanE, N-terminal; Ketopantoate reductase ApbA/PanE, C-terminal; NUDIX hydrolase domain; PRIAM: 2-dehydropantoate 2-reductase; SPTR: Putative uncharacterized protein; TIGRFAM: Ketopantoate reductase ApbA/PanE; integral membrane sensor signal transduction histidine kinase 1976872 10816169 Flexsi_1852 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004604058.1 1975151 D 717231 CDS YP_004604059.1 336324092 10816170 complement(1977102..1978442) 1 NC_015672.1 PFAM: Ketopantoate reductase PanE/ApbA; NUDIX domain; Ketopantoate reductase PanE/ApbA C terminal; TIGRFAM: 2-dehydropantoate 2-reductase; COGs: COG0542 ATPase with chaperone activity ATP-binding subunit; InterProIPR003593:IPR004176:IPR003959:IPR013093:IPR 019489; KEGG: ddf:DEFDS_2127 ATP-dependent Clp protease ATP-binding subunit ClpC; PFAM: ATPase associated with various cellular activities, AAA-2; ATPase, AAA-type, core; Clp, N-terminal; Clp ATPase, C-terminal; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent Clp protease, ATP-binding subunit ClpC; 2-dehydropantoate 2-reductase 1978442 10816170 Flexsi_1853 Flexistipes sinusarabici DSM 4947 2-dehydropantoate 2-reductase YP_004604059.1 1977102 R 717231 CDS YP_004604060.1 336324093 10816171 complement(1978420..1980819) 1 NC_015672.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; Clp amino terminal domain; ATPase family associated with various cellular activities (AAA); COGs: COG2716 Glycine cleavage system regulatory protein; InterPro IPR002912; KEGG: ddf:DEFDS_2129 glycine cleavage system transcriptional repressor; PFAM: Amino acid-binding ACT; SPTR: Glycine cleavage system transcriptional repressor; ATPase AAA-2 domain-containing protein 1980819 10816171 Flexsi_1854 Flexistipes sinusarabici DSM 4947 ATPase AAA-2 domain-containing protein YP_004604060.1 1978420 R 717231 CDS YP_004604061.1 336324094 10816172 1980999..1981556 1 NC_015672.1 PFAM: ACT domain; COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: ddf:DEFDS_2130 polypeptide deformylase; PFAM: Formylmethionine deformylase; PRIAM: Peptide deformylase; SPTR: Peptide deformylase 2; TIGRFAM: Formylmethionine deformylase; amino acid-binding ACT domain-containing protein 1981556 10816172 Flexsi_1855 Flexistipes sinusarabici DSM 4947 amino acid-binding ACT domain-containing protein YP_004604061.1 1980999 D 717231 CDS YP_004604062.1 336324095 10816173 1981559..1982062 1 NC_015672.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG1052 Lactate dehydrogenase and related dehydrogenase; InterPro IPR006139:IPR006140; KEGG: cni:Calni_0206 D-isomer specific 2-hydroxyacid dehydrogenase nad-binding protein; PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic region; PRIAM: Glyoxylate reductase; SPTR: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding protein; peptide deformylase 1982062 10816173 Flexsi_1856 Flexistipes sinusarabici DSM 4947 peptide deformylase YP_004604062.1 1981559 D 717231 CDS YP_004604063.1 336324096 10816174 1982059..1983033 1 NC_015672.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain; glyoxylate reductase 1983033 10816174 Flexsi_1857 Flexistipes sinusarabici DSM 4947 glyoxylate reductase YP_004604063.1 1982059 D 717231 CDS YP_004604064.1 336324097 10816177 1983838..1984371 1 NC_015672.1 PFAM: Uncharacterised protein family (UPF0153); COGs: COG1484 DNA replication protein; InterPro IPR002611; KEGG: ere:EUBREC_3222 possible transposase; PFAM: IstB-like ATP-binding protein; SPTR: DNA replication protein; hypothetical protein 1984371 10816177 Flexsi_1858 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604064.1 1983838 D 717231 CDS YP_004604065.1 336324098 10816178 complement(1984385..1985152) 1 NC_015672.1 PFAM: IstB-like ATP binding protein; IstB-like ATP binding N-terminal; This gene is disrupted by insertion of repetitive element; manually curated; IstB domain-containing protein ATP-binding protein 1985152 10816178 Flexsi_1859 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004604065.1 1984385 R 717231 CDS YP_004604066.1 336324099 10816180 1985532..1986899 1 NC_015672.1 PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 1986899 10816180 Flexsi_1861 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604066.1 1985532 D 717231 CDS YP_004604067.1 336324100 10816182 complement(1988777..1988992) 1 NC_015672.1 PFAM: Transcriptional Coactivator p15 (PC4); transcriptional coactivator p15 1988992 10816182 Flexsi_1863 Flexistipes sinusarabici DSM 4947 transcriptional coactivator p15 YP_004604067.1 1988777 R 717231 CDS YP_004604068.1 336324101 10816183 complement(1989009..1989356) 1 NC_015672.1 COGs: COG3091 conserved hypothetical protein; InterPro IPR006640:IPR005622; KEGG: cni:Calni_0195 hypothetical protein; SMART: Protein of unknown function SprT; SPTR: Putative uncharacterized protein; hypothetical protein 1989356 10816183 Flexsi_1864 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604068.1 1989009 R 717231 CDS YP_004604069.1 336324102 10816184 complement(1989349..1989858) 1 NC_015672.1 PFAM: SprT-like family; hypothetical protein 1989858 10816184 Flexsi_1865 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604069.1 1989349 R 717231 CDS YP_004604070.1 336324103 10816186 complement(1990526..1990732) 1 NC_015672.1 PFAM: Protein of unknown function (DUF2283); KEGG: cli:Clim_0720 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1990732 10816186 Flexsi_1866 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604070.1 1990526 R 717231 CDS YP_004604071.1 336324104 10816187 complement(1990729..1990971) 1 NC_015672.1 hypothetical protein 1990971 10816187 Flexsi_1867 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604071.1 1990729 R 717231 CDS YP_004604072.1 336324105 10816188 complement(1991289..1991390) 1 NC_015672.1 InterPro IPR018649; KEGG: ddf:DEFDS_0309 hypothetical protein; PFAM: Protein of unknown function DUF2078, membrane; SPTR: Putative uncharacterized protein; hypothetical protein 1991390 10816188 Flexsi_1868 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604072.1 1991289 R 717231 CDS YP_004604073.1 336324106 10816189 complement(1991557..1991790) 1 NC_015672.1 PFAM: Predicted membrane protein (DUF2078); KEGG: ddf:DEFDS_0913 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 1991790 10816189 Flexsi_1869 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604073.1 1991557 R 717231 CDS YP_004604074.1 336324107 10816190 complement(1991858..1992271) 1 NC_015672.1 PFAM: Protein of unknown function (DUF2874); InterPro IPR019020; KEGG: ppr:PBPRB0283 hypothetical protein; PFAM: Cytochrome c-552/DMSO reductase-like, haem-binding domain; SPTR: Putative uncharacterized protein; hypothetical protein 1992271 10816190 Flexsi_1870 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604074.1 1991858 R 717231 CDS YP_004604075.1 336324108 10816191 complement(1992834..1993946) 1 NC_015672.1 PFAM: Ethylbenzene dehydrogenase; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789; KEGG: response regulator receiver; PFAM: Signal transduction response regulator, receiver region; SMART: Signal transduction response regulator, receiver region; SPTR: Response regulator receiver; cytochrome c-552/DMSO reductase-like, heme-binding domain-containing protein 1993946 10816191 Flexsi_1871 Flexistipes sinusarabici DSM 4947 cytochrome c-552/DMSO reductase-like, heme-binding domain-containing protein YP_004604075.1 1992834 R 717231 CDS YP_004604076.1 336324109 10816192 complement(1994065..1994703) 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003661:IPR003594; KEGG: ATPase ATP-binding domain-containing protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: ATP-binding region ATPase domain protein; response regulator receiver protein 1994703 10816192 Flexsi_1872 Flexistipes sinusarabici DSM 4947 response regulator receiver protein YP_004604076.1 1994065 R 717231 CDS YP_004604077.1 336324110 10816193 complement(1994706..1996115) 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: fnu:FN1352 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Phosphonate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; integral membrane sensor signal transduction histidine kinase 1996115 10816193 Flexsi_1873 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004604077.1 1994706 R 717231 CDS YP_004604078.1 336324111 10816194 complement(1996177..1996860) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: yen:YE2493 hypothetical protein; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Raw score 9.02; phosphonate-transporting ATPase 1996860 10816194 Flexsi_1874 Flexistipes sinusarabici DSM 4947 phosphonate-transporting ATPase YP_004604078.1 1996177 R 717231 CDS YP_004604079.1 336324112 10816195 complement(1996882..1998030) 1 NC_015672.1 PFAM: Predicted permease; COGs: COG4591 ABC-type transport system involved in lipoprotein release permease component; InterPro IPR003838; KEGG: clo:HMPREF0868_0236 efflux ABC transporter permease; PFAM: Protein of unknown function DUF214, permase predicted; SPTR: Permease domain protein; hypothetical protein 1998030 10816195 Flexsi_1875 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604079.1 1996882 R 717231 CDS YP_004604080.1 336324113 10816196 complement(1998042..1999334) 1 NC_015672.1 PFAM: Predicted permease; COGs: COG4393 membrane protein; InterPro IPR018758; KEGG: tde:TDE1512 hypothetical protein; PFAM: Protein of unknown function DUF2318, membrane; SPTR: Membrane protein, putative; hypothetical protein 1999334 10816196 Flexsi_1876 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604080.1 1998042 R 717231 CDS YP_004604081.1 336324114 10816197 complement(1999346..2000614) 1 NC_015672.1 PFAM: Predicted membrane protein (DUF2318); COGs: COG3470 Uncharacterized protein probably involved in high-affinity Fe2+ transport; InterPro IPR018470; KEGG: yen:YE2496 hypothetical protein; PFAM: Ferrous iron transport protein, bacterial; SPTR: Membrane antigen; hypothetical protein 2000614 10816197 Flexsi_1877 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604081.1 1999346 R 717231 CDS YP_004604082.1 336324115 10816198 complement(2000884..2001429) 1 NC_015672.1 PFAM: Fe2+ transport protein; COGs: COG0672 High-affinity Fe2+/Pb2+ permease; InterPro IPR004923; KEGG: cko:CKO_02057 hypothetical protein; PFAM: Iron permease FTR1; SPTR: Putative iron permease; ferrous iron transport protein 2001429 10816198 Flexsi_1878 Flexistipes sinusarabici DSM 4947 ferrous iron transport protein YP_004604082.1 2000884 R 717231 CDS YP_004604083.1 336324116 10816199 complement(2001467..2002669) 1 NC_015672.1 PFAM: Iron permease FTR1 family; TIGRFAM: FTR1 family protein; KEGG: glo:Glov_1973 hypothetical protein; SPTR: Putative uncharacterized protein; iron permease FTR1 2002669 10816199 Flexsi_1879 Flexistipes sinusarabici DSM 4947 iron permease FTR1 YP_004604083.1 2001467 R 717231 CDS YP_004604084.1 336324117 10816200 complement(2003212..2003682) 1 NC_015672.1 COGs: COG2270 Permease of the major facilitator superfamily; InterPro IPR011701; KEGG: sfu:Sfum_3450 major facilitator transporter; PFAM: Major facilitator superfamily MFS-1; SPTR: Major facilitator superfamily MFS_1; hypothetical protein 2003682 10816200 Flexsi_1880 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604084.1 2003212 R 717231 CDS YP_004604085.1 336324118 10816201 2003916..2005166 1 NC_015672.1 PFAM: Vacuole effluxer Atg22 like; InterPro IPR000182; KEGG: hse:Hsero_1858 acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Acetyltransferase protein; major facilitator superfamily protein 2005166 10816201 Flexsi_1881 Flexistipes sinusarabici DSM 4947 major facilitator superfamily protein YP_004604085.1 2003916 D 717231 CDS YP_004604086.1 336324119 10816202 2005541..2006032 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; KEGG: hypothetical protein; SPTR: Putative uncharacterized protein; N-acetyltransferase GCN5 2006032 10816202 Flexsi_1882 Flexistipes sinusarabici DSM 4947 N-acetyltransferase GCN5 YP_004604086.1 2005541 D 717231 CDS YP_004604087.1 336324120 10816203 2006224..2006664 1 NC_015672.1 PFAM: Protein required for attachment to host cells; manually curated; hypothetical protein 2006664 10816203 Flexsi_1883 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604087.1 2006224 D 717231 CDS YP_004604088.1 336324121 10816205 complement(2007458..2007985) 1 NC_015672.1 COGs: COG0604 NADPH:quinone reductase and related Zn-dependent oxidoreductase; InterPro IPR014188:IPR013154:IPR013149; KEGG: amc:MADE_01969 alcohol dehydrogenase, zinc-containing; PFAM: Alcohol dehydrogenase, zinc-binding; Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-containing; TIGRFAM: Quinone oxidoreductase putative, YhdH/YhfP; putative signaling protein 2007985 10816205 Flexsi_1885 Flexistipes sinusarabici DSM 4947 putative signaling protein YP_004604088.1 2007458 R 717231 CDS YP_004604089.1 336324122 10816206 2008392..2009387 1 NC_015672.1 PFAM: Alcohol dehydrogenase GroES-like domain; Zinc-binding dehydrogenase; TIGRFAM: putative quinone oxidoreductase, YhdH/YhfP family; KEGG: drt:Dret_1468 anti-ECFsigma factor, ChrR; SPTR: Anti-ECFsigma factor, ChrR; YhdH/YhfP family quinone oxidoreductase 2009387 10816206 Flexsi_1886 Flexistipes sinusarabici DSM 4947 YhdH/YhfP family quinone oxidoreductase YP_004604089.1 2008392 D 717231 CDS YP_004604090.1 336324123 10816207 2009389..2010015 1 NC_015672.1 InterPro IPR000620; KEGG: ddf:DEFDS_0955 drug/metabolite transporter DME family; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Drug/metabolite transporter, DME family; anti-ECFsigma factor ChrR 2010015 10816207 Flexsi_1887 Flexistipes sinusarabici DSM 4947 anti-ECFsigma factor ChrR YP_004604090.1 2009389 D 717231 CDS YP_004604091.1 336324124 10816208 complement(2010315..2011208) 1 NC_015672.1 PFAM: EamA-like transporter family; hypothetical protein 2011208 10816208 Flexsi_1888 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604091.1 2010315 R 717231 CDS YP_004604092.1 336324125 10816210 complement(2011682..2012116) 1 NC_015672.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2062); COGs: COG0466 ATP-dependent Lon protease; InterProIPR004815:IPR003111:IPR003593:IPR003959:IPR 008269; KEGG: ddf:DEFDS_1706 ATP-dependent Lon protease; PFAM: Peptidase S16, lon C-terminal; Peptidase S16, lon N-terminal; ATPase, AAA-type, core; PRIAM: Endopeptidase La; SMART: Peptidase S16, lon N-terminal; ATPase, AAA+ type, core; SPTR: ATP-dependent protease La; TIGRFAM: Peptidase S16, ATP-dependent protease La; hypothetical protein 2012116 10816210 Flexsi_1889 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604092.1 2011682 R 717231 CDS YP_004604093.1 336324126 10816211 complement(2012139..2014469) 1 NC_015672.1 PFAM: ATP-dependent protease La (LON) domain; ATPase family associated with various cellular activities (AAA); Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: ATP-dependent protease La; COGs: COG0071 Molecular chaperone (small heat shock protein); InterPro IPR002068; KEGG: ddf:DEFDS_1707 small heat shock protein, class I; PFAM: Heat shock protein Hsp20; SPTR: Small heat shock protein, class I; anti-sigma H sporulation factor LonB 2014469 10816211 Flexsi_1890 Flexistipes sinusarabici DSM 4947 anti-sigma H sporulation factor LonB YP_004604093.1 2012139 R 717231 CDS YP_004604094.1 336324127 10816212 complement(2014498..2014899) 1 NC_015672.1 PFAM: Hsp20/alpha crystallin family; COGs: COG1210 UDP-glucose pyrophosphorylase; InterPro IPR005771:IPR005835; KEGG: cni:Calni_1635 udp-glucose pyrophosphorylase; PFAM: Nucleotidyl transferase; PRIAM: UTP--glucose-1-phosphate uridylyltransferase; SPTR: UDP-glucose pyrophosphorylase; TIGRFAM: UTP--glucose-1-phosphate uridylyltransferase, bacterial/archaeal type; heat shock protein Hsp20 2014899 10816212 Flexsi_1891 Flexistipes sinusarabici DSM 4947 heat shock protein Hsp20 YP_004604094.1 2014498 R 717231 CDS YP_004604095.1 336324128 10816213 complement(2014886..2015770) 1 NC_015672.1 PFAM: Nucleotidyl transferase; TIGRFAM: UTP-glucose-1-phosphate uridylyltransferase; COGs: COG1355 dioxygenase; InterPro IPR002737; KEGG: ddf:DEFDS_1709 hypothetical protein; PFAM: UPF0103/Mediator of ErbB2-driven cell motility (Memo), related; SPTR: Putative uncharacterized protein; UTP-glucose-1-phosphate uridylyltransferase 2015770 10816213 Flexsi_1892 Flexistipes sinusarabici DSM 4947 UTP-glucose-1-phosphate uridylyltransferase YP_004604095.1 2014886 R 717231 CDS YP_004604096.1 336324129 10816214 complement(2015878..2016666) 1 NC_015672.1 PFAM: Memo-like protein; KEGG: dap:Dacet_1841 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2016666 10816214 Flexsi_1893 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604096.1 2015878 R 717231 CDS YP_004604097.1 336324130 10816215 complement(2016645..2017490) 1 NC_015672.1 COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050:IPR006638:IPR007197; KEGG: ddf:DEFDS_1711 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; TIGRFAM: putative menaquinone biosynthesis protein; FO synthase, subunit 2; hypothetical protein 2017490 10816215 Flexsi_1894 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604097.1 2016645 R 717231 CDS YP_004604098.1 336324131 10816216 complement(2017471..2018478) 1 NC_015672.1 PFAM: Radical SAM superfamily; TIGRFAM: putative menaquinone biosynthesis protein, SCO4494 family; radical SAM domain protein, CofH subfamily; COGs: COG2206 HD-GYP domain; InterPro IPR001789:IPR003607:IPR006674; KEGG: ddf:DEFDS_1712 hypothetical protein; PFAM: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Signal transduction response regulator, receiver region; Metal-dependent phosphohydrolase, HD region; SPTR: Putative uncharacterized protein; putative menaquinone biosynthesis protein 2018478 10816216 Flexsi_1895 Flexistipes sinusarabici DSM 4947 putative menaquinone biosynthesis protein YP_004604098.1 2017471 R 717231 CDS YP_004604099.1 336324132 10816217 complement(2018475..2019881) 1 NC_015672.1 PFAM: HD domain; Response regulator receiver domain; COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; InterPro IPR001623; KEGG: cni:Calni_0537 heat shock protein DnaJ domain protein; PFAM: Heat shock protein DnaJ, N-terminal; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Heat shock protein DnaJ domain protein; response regulator receiver modulated metal dependent phosphohydrolase 2019881 10816217 Flexsi_1896 Flexistipes sinusarabici DSM 4947 response regulator receiver modulated metal dependent phosphohydrolase YP_004604099.1 2018475 R 717231 CDS YP_004604100.1 336324133 10816218 2020562..2021221 1 NC_015672.1 PFAM: DnaJ domain; heat shock protein DnaJ domain-containing protein 2021221 10816218 Flexsi_1897 Flexistipes sinusarabici DSM 4947 heat shock protein DnaJ domain-containing protein YP_004604100.1 2020562 D 717231 CDS YP_004604101.1 336324134 10816219 complement(2021772..2021960) 1 NC_015672.1 COGs: COG2871 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrF; InterPro IPR010205:IPR001041:IPR008333:IPR001433; KEGG: ddf:DEFDS_1913 Na(+)-translocating NADH-quinone reductase subunit F; PFAM: Oxidoreductase FAD/NAD(P)-binding; Ferredoxin; Oxidoreductase FAD-binding region; PRIAM: Phenol 2-monooxygenase; SPTR: Na(+)-translocating NADH-quinone reductase subunit F; TIGRFAM: NADH-quinone reductase, Na(+)-translocating, F subunit; hypothetical protein 2021960 10816219 Flexsi_1898 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604101.1 2021772 R 717231 CDS YP_004604102.1 336324135 10816220 complement(2021960..2023180) 1 NC_015672.1 PFAM: 2Fe-2S iron-sulfur cluster binding domain; Oxidoreductase FAD-binding domain; Oxidoreductase NAD-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit; COGs: COG2209 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrE; HAMAP: Na(+)-translocating NADH-quinone reductase subunit E; InterPro IPR010967:IPR003667; KEGG: ddf:DEFDS_1914 Na(+)-translocating NADH-quinone reductase subunit E; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Na(+)-translocating NADH-quinone reductase subunit E; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; NADH:ubiquinone oxidoreductase subunit F 2023180 10816220 Flexsi_1899 Flexistipes sinusarabici DSM 4947 NADH:ubiquinone oxidoreductase subunit F YP_004604102.1 2021960 R 717231 CDS YP_004604103.1 336324136 10816221 complement(2023193..2023804) 1 NC_015672.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit; COGs: COG1347 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrD; InterPro IPR011292:IPR003667; KEGG: ddf:DEFDS_1915 Na(+)-translocating NADH-quinone reductase subunit D; PFAM: Electron transport complex, Rnf/Nqr; SPTR: Na(+)-translocating NADH-quinone reductase subunit D; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; Na(+)-translocating NADH-quinone reductase subunit E 2023804 10816221 Flexsi_1900 Flexistipes sinusarabici DSM 4947 Na(+)-translocating NADH-quinone reductase subunit E YP_004604103.1 2023193 R 717231 CDS YP_004604104.1 336324137 10816222 complement(2023810..2024424) 1 NC_015672.1 PFAM: Rnf-Nqr subunit, membrane protein; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, D subunit; COGs: COG2869 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrC; InterPro IPR010204:IPR007329; KEGG: dap:Dacet_2020 NADH:ubiquinone oxidoreductase, subunit C; PFAM: FMN-binding; SPTR: NADH:ubiquinone oxidoreductase, subunit C; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; NADH:ubiquinone oxidoreductase subunit D 2024424 10816222 Flexsi_1901 Flexistipes sinusarabici DSM 4947 NADH:ubiquinone oxidoreductase subunit D YP_004604104.1 2023810 R 717231 CDS YP_004604105.1 336324138 10816223 complement(2024421..2025206) 1 NC_015672.1 PFAM: FMN-binding domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit; COGs: COG1805 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrB; InterPro IPR010966:IPR004338; KEGG: dap:Dacet_2021 NADH:ubiquinone oxidoreductase, subunit B; PFAM: NADH-quinone reductase NQR2/RnfD; SPTR: NADH:ubiquinone oxidoreductase, subunit B; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; NADH:ubiquinone oxidoreductase subunit C 2025206 10816223 Flexsi_1902 Flexistipes sinusarabici DSM 4947 NADH:ubiquinone oxidoreductase subunit C YP_004604105.1 2024421 R 717231 CDS YP_004604106.1 336324139 10816224 complement(2025196..2026395) 1 NC_015672.1 PFAM: NQR2, RnfD, RnfE family; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit; COGs: COG1726 Na+-transporting NADH:ubiquinone oxidoreductase subunit NqrA; HAMAP: Na(+)-translocating NADH-quinone reductase subunit A; InterPro IPR008703; KEGG: ilo:IL1050 Na(+)-translocating NADH-quinone reductase subunit A; PFAM: Na-translocating NADH-quinone reductase subunit A; SPTR: Na(+)-translocating NADH-quinone reductase subunit A; TIGRFAM: Na-translocating NADH-quinone reductase subunit A; NADH:ubiquinone oxidoreductase subunit B 2026395 10816224 Flexsi_1903 Flexistipes sinusarabici DSM 4947 NADH:ubiquinone oxidoreductase subunit B YP_004604106.1 2025196 R 717231 CDS YP_004604107.1 336324140 10816225 complement(2026396..2027742) 1 NC_015672.1 PFAM: Na(+)-translocating NADH-quinone reductase subunit A (NQRA); NQRA C-terminal domain; TIGRFAM: NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit; Na(+)-translocating NADH-quinone reductase subunit A 2027742 10816225 Flexsi_1904 Flexistipes sinusarabici DSM 4947 Na(+)-translocating NADH-quinone reductase subunit A YP_004604107.1 2026396 R 717231 CDS YP_004604108.1 336324141 10816226 complement(2027843..2028097) 1 NC_015672.1 COGs: COG4584 Transposase and inactivated derivatives; KEGG: toc:Toce_1959 integrase catalytic region; SPTR: Integrase catalytic region; hypothetical protein 2028097 10816226 Flexsi_1905 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604108.1 2027843 R 717231 CDS YP_004604109.1 336324142 10816227 2028275..2029798 1 NC_015672.1 PFAM: Integrase core domain; COGs: COG1484 DNA replication protein; InterPro IPR003593:IPR002611; KEGG: toc:Toce_0299 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SMART: ATPase, AAA+ type, core; SPTR: IstB domain protein ATP-binding protein; integrase catalytic subunit 2029798 10816227 Flexsi_1906 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004604109.1 2028275 D 717231 CDS YP_004604110.1 336324143 10816228 2029785..2030471 1 NC_015672.1 PFAM: IstB-like ATP binding protein; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IstB domain-containing protein ATP-binding protein 2030471 10816228 Flexsi_1907 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004604110.1 2029785 D 717231 CDS YP_004604111.1 336324144 10816229 complement(2030638..2031903) 1 NC_015672.1 COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; transposase IS4 family protein 2031903 10816229 Flexsi_1908 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604111.1 2030638 R 717231 CDS YP_004604112.1 336324145 10816230 2032751..2033764 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG3039 Transposase and inactivated derivatives IS5 family; InterPro IPR002559; KEGG: ddf:DEFDS_0280 transposase IS4 family; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS116/IS110/IS902 family protein 2033764 10816230 Flexsi_1909 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004604112.1 2032751 D 717231 CDS YP_004604113.1 336324146 10816231 complement(2034064..2035113) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG1832 CoA-binding protein; InterPro IPR003781; KEGG: cni:Calni_0337 CoA-binding domain protein; PFAM: CoA-binding; SPTR: CoA-binding domain protein; transposase IS4 family protein 2035113 10816231 Flexsi_1910 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604113.1 2034064 R 717231 CDS YP_004604114.1 336324147 10816232 2035365..2035778 1 NC_015672.1 PFAM: CoA binding domain; COGs: COG0505 Carbamoylphosphate synthase small subunit; InterPro IPR006274:IPR002474:IPR000991; KEGG: ddf:DEFDS_1021 carbamoylphosphate synthase small subunit; PFAM: Carbamoyl phosphate synthase, small subunit, N-terminal; Glutamine amidotransferase class-I, C-terminal; PRIAM: Carbamoyl-phosphate synthase (glutamine-hydrolyzing); SPTR: Carbamoylphosphate synthase, small subunit; TIGRFAM: Carbamoyl phosphate synthase, small subunit; CoA-binding domain-containing protein 2035778 10816232 Flexsi_1911 Flexistipes sinusarabici DSM 4947 CoA-binding domain-containing protein YP_004604114.1 2035365 D 717231 CDS YP_004604115.1 336324148 10816233 2036383..2037513 1 NC_015672.1 PFAM: Carbamoyl-phosphate synthase small chain, CPSase domain; Glutamine amidotransferase class-I; TIGRFAM: carbamoyl-phosphate synthase, small subunit; COGs: COG1559 periplasmic solute-binding protein; InterPro IPR003770; KEGG: ddf:DEFDS_1020 aminodeoxychorismate lyase; PFAM: Uncharacterised protein family YceG-like; SPTR: Aminodeoxychorismate lyase; TIGRFAM: Uncharacterised protein family YceG-like; carbamoyl-phosphate synthase small subunit 2037513 10816233 Flexsi_1912 Flexistipes sinusarabici DSM 4947 carbamoyl-phosphate synthase small subunit YP_004604115.1 2036383 D 717231 CDS YP_004604116.1 336324149 10816234 2037506..2038498 1 NC_015672.1 PFAM: YceG-like family; TIGRFAM: conserved hypothetical protein, YceG family; manually curated; aminodeoxychorismate lyase 2038498 10816234 Flexsi_1913 Flexistipes sinusarabici DSM 4947 aminodeoxychorismate lyase YP_004604116.1 2037506 D 717231 CDS YP_004604117.1 336324150 10816236 complement(2039874..2040923) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); transposase IS4 family protein 2040923 10816236 Flexsi_1915 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604117.1 2039874 R 717231 CDS YP_004604118.1 336324151 10816237 complement(2041011..2041148) 1 NC_015672.1 COGs: COG4584 Transposase and inactivated derivatives; InterPro IPR001584; KEGG: mac:MA2579 transposase; PFAM: Integrase, catalytic core; SPTR: Transposase, IS21; hypothetical protein 2041148 10816237 Flexsi_1916 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604118.1 2041011 R 717231 CDS YP_004604119.1 336324152 10816238 complement(2041145..2042389) 1 NC_015672.1 PFAM: Integrase core domain; integrase catalytic subunit 2042389 10816238 Flexsi_1917 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004604119.1 2041145 R 717231 CDS YP_004604120.1 336324153 10816239 complement(2042474..2042629) 1 NC_015672.1 COGs: COG1669 nucleotidyltransferase; InterPro IPR002934; KEGG: DNA polymerase beta domain protein region; PFAM: Nucleotidyltransferase; SPTR: DNA polymerase beta domain protein region; hypothetical protein 2042629 10816239 Flexsi_1918 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604120.1 2042474 R 717231 CDS YP_004604121.1 336324154 10816240 complement(2042622..2042933) 1 NC_015672.1 PFAM: Nucleotidyltransferase domain; InterPro IPR011462; KEGG: pca:Pcar_2264 transposase and inactivated derivatives; SPTR: Putative uncharacterized protein; DNA polymerase beta domain-containing protein 2042933 10816240 Flexsi_1919 Flexistipes sinusarabici DSM 4947 DNA polymerase beta domain-containing protein YP_004604121.1 2042622 R 717231 CDS YP_004604122.1 336324155 10816241 2043192..2043839 1 NC_015672.1 PFAM: Transposase IS200 like; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 2043839 10816241 Flexsi_1920 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604122.1 2043192 D 717231 CDS YP_004604123.1 336324156 10816242 2043987..2045306 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0472 UDP-N-acetylmuramyl pentapeptide phosphotransferase/UDP-N- acetylglucosamine-1-phosphate transferase; InterPro IPR018481; KEGG: cni:Calni_1143 glycosyl transferase, family 4, conserved region; PFAM: Glycosyl transferase, family 4, conserved region; SPTR: Glycosyl transferase, family 4, conserved region; transposase IS4 family protein 2045306 10816242 Flexsi_1921 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604123.1 2043987 D 717231 CDS YP_004604124.1 336324157 10816243 2045575..2046615 1 NC_015672.1 PFAM: Glycosyl transferase family 4; manually curated; glycosyl transferase family protein 2046615 10816243 Flexsi_1922 Flexistipes sinusarabici DSM 4947 glycosyl transferase family protein YP_004604124.1 2045575 D 717231 CDS YP_004604125.1 336324158 10816246 complement(2047961..2049328) 1 NC_015672.1 PFAM: Transposase domain (DUF772); manually curated; transposase IS4 family protein 2049328 10816246 Flexsi_1925 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604125.1 2047961 R 717231 CDS YP_004604126.1 336324159 10816248 complement(2049600..2051435) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 2051435 10816248 Flexsi_1927 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604126.1 2049600 R 717231 CDS YP_004604127.1 336324160 10816250 2052597..2053409 1 NC_015672.1 PFAM: IstB-like ATP binding protein; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IstB domain-containing protein ATP-binding protein 2053409 10816250 Flexsi_1929 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004604127.1 2052597 D 717231 CDS YP_004604128.1 336324161 10816251 2053704..2055380 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; transposase IS4 family protein 2055380 10816251 Flexsi_1930 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604128.1 2053704 D 717231 CDS YP_004604129.1 336324162 10816252 complement(2055605..2056924) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 2056924 10816252 Flexsi_1931 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604129.1 2055605 R 717231 CDS YP_004604130.1 336324163 10816254 complement(2058202..2059587) 1 NC_015672.1 PFAM: Aldehyde dehydrogenase family; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000587:IPR000994; KEGG: hna:Hneap_2201 peptidase M24; PFAM: Creatinase; Peptidase M24, structural domain; SPTR: Peptidase M24; succinate-semialdehyde dehydrogenase 2059587 10816254 Flexsi_1933 Flexistipes sinusarabici DSM 4947 succinate-semialdehyde dehydrogenase YP_004604130.1 2058202 R 717231 CDS YP_004604131.1 336324164 10816255 complement(2059607..2060902) 1 NC_015672.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0160 4-aminobutyrate aminotransferase and related aminotransferase; InterPro IPR004637:IPR005814; KEGG: hna:Hneap_2200 2,4-diaminobutyrate 4-transaminase; PFAM: Aminotransferase class-III; PRIAM: Diaminobutyrate--2-oxoglutarate transaminase; SPTR: Diaminobutyrate--2-oxoglutarate transaminase; TIGRFAM: Diaminobutyrate-2-oxoglutarate transaminase; creatinase 2060902 10816255 Flexsi_1934 Flexistipes sinusarabici DSM 4947 creatinase YP_004604131.1 2059607 R 717231 CDS YP_004604132.1 336324165 10816256 complement(2060911..2062164) 1 NC_015672.1 PFAM: Aminotransferase class-III; TIGRFAM: 2,4-diaminobutyrate 4-transaminases; diaminobutyrate--2-oxoglutarate aminotransferase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: ant:Arnit_1214 amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: Hippurate hydrolase; SPTR: Amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; 2,4-diaminobutyrate 4-transaminase 2062164 10816256 Flexsi_1935 Flexistipes sinusarabici DSM 4947 2,4-diaminobutyrate 4-transaminase YP_004604132.1 2060911 R 717231 CDS YP_004604133.1 336324166 10816257 complement(2062175..2063329) 1 NC_015672.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1410 Methionine synthase I cobalamin-binding domain; InterProIPR011822:IPR003726:IPR000489:IPR003759:IPR 006158:IPR004223; KEGG: ddf:DEFDS_1683 5-methyltetrahydrofolate--homocysteine methyltransferase; PFAM: Homocysteine S-methyltransferase; Dihydropteroate synthase, DHPS; Methionine synthase, cobalamin (vitamin B12)-binding module, cap; Cobalamin (vitamin B12)-binding; Vitamin B12 dependent methionine synthase, activation region; PRIAM: Methionine synthase; SPTR: 5-methyltetrahydrofolate--homocysteine methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; amidohydrolase 2063329 10816257 Flexsi_1936 Flexistipes sinusarabici DSM 4947 amidohydrolase YP_004604133.1 2062175 R 717231 CDS YP_004604134.1 336324167 10816258 2064115..2067486 1 NC_015672.1 PFAM: Pterin binding enzyme; Vitamin B12 dependent methionine synthase, activation domain; B12 binding domain; Homocysteine S-methyltransferase; TIGRFAM: 5-methyltetrahydrofolate--homocysteine methyltransferase; COGs: COG1126 ABC-type polar amino acid transport system ATPase component; InterPro IPR014343:IPR003593:IPR003439; KEGG: rhi:NGR_a01510 probable amino-acid ABC transporter ATP-binding protein y4tH; PFAM: ABC transporter-like; PRIAM: Fe(3+)-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Probable amino-acid ABC transporter ATP-binding protein y4tH; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, ATP-binding protein; methionine synthase 2067486 10816258 Flexsi_1937 Flexistipes sinusarabici DSM 4947 methionine synthase YP_004604134.1 2064115 D 717231 CDS YP_004604135.1 336324168 10816259 complement(2067634..2068413) 1 NC_015672.1 PFAM: ABC transporter; TIGRFAM: ectoine/hydroxyectoine ABC transporter, ATP-binding protein; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR014341:IPR010065:IPR000515; KEGG: rhi:NGR_a01520 probable amino-acid ABC transporter permease y4tG; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Probable amino-acid ABC transporter permease protein y4tG; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease protein EhuD; Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ectoine/hydroxyectoine ABC transporter ATP-binding protein 2068413 10816259 Flexsi_1938 Flexistipes sinusarabici DSM 4947 ectoine/hydroxyectoine ABC transporter ATP-binding protein YP_004604135.1 2067634 R 717231 CDS YP_004604136.1 336324169 10816260 complement(2068425..2069120) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuD; COGs: COG0765 ABC-type amino acid transport system permease component; InterPro IPR014342:IPR010065:IPR000515; KEGG: rhi:NGR_a01530 probable amino-acid ABC transporter permease y4tF; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Probable amino-acid ABC transporter permease protein y4tF; TIGRFAM: Ectoine/hydroxyectoine ABC transporter, permease protein EhuC; Amino acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine; ectoine/hydroxyectoine ABC transporter permease EhuD 2069120 10816260 Flexsi_1939 Flexistipes sinusarabici DSM 4947 ectoine/hydroxyectoine ABC transporter permease EhuD YP_004604136.1 2068425 R 717231 CDS YP_004604137.1 336324170 10816261 complement(2069120..2069797) 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; TIGRFAM: amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family; ectoine/hydroxyectoine ABC transporter, permease protein EhuC; COGs: COG0834 ABC-type amino acid transport/signal transduction systems periplasmic component/domain; InterPro IPR014337:IPR001638; KEGG: rhi:NGR_a01540 probable periplasmic amino-acid binding protein y4tE of ABC-transporter; PFAM: Extracellular solute-binding protein, family 3; SMART: Extracellular solute-binding protein, family 3; SPTR: Probable amino-acid ABC transporter periplasmic-binding protein y4tE; TIGRFAM: Ectoine/hydroxyEctoine ABC transporter solute-binding protein; ectoine/hydroxyectoine ABC transporter permease EhuC 2069797 10816261 Flexsi_1940 Flexistipes sinusarabici DSM 4947 ectoine/hydroxyectoine ABC transporter permease EhuC YP_004604137.1 2069120 R 717231 CDS YP_004604138.1 336324171 10816262 complement(2069883..2070764) 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding proteins, family 3; TIGRFAM: ectoine/hydroxyectoine ABC transporter solute-binding protein; COGs: COG4198 conserved hypothetical protein; InterPro IPR008323; KEGG: ddf:DEFDS_0114 hypothetical protein; PFAM: Uncharacterised conserved protein UCP033563; SPTR: Putative uncharacterized protein; ectoine/hydroxyectoine ABC transporter solute-binding protein 2070764 10816262 Flexsi_1941 Flexistipes sinusarabici DSM 4947 ectoine/hydroxyectoine ABC transporter solute-binding protein YP_004604138.1 2069883 R 717231 CDS YP_004604139.1 336324172 10816263 complement(2071141..2072388) 1 NC_015672.1 PFAM: Protein of unknown function (DUF1015); COGs: COG0162 Tyrosyl-tRNA synthetase; HAMAP: Tyrosyl-tRNA synthetase; InterPro IPR002307:IPR002305; KEGG: ddf:DEFDS_0113 tyrosyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class Ib; SPTR: Tyrosyl-tRNA synthetase; TIGRFAM: Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial; hypothetical protein 2072388 10816263 Flexsi_1942 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604139.1 2071141 R 717231 CDS YP_004604140.1 336324173 10816264 complement(2072402..2073601) 1 NC_015672.1 PFAM: S4 domain; tRNA synthetases class I (W and Y); TIGRFAM: tyrosyl-tRNA synthetase; COGs: COG1989 Type II secretory pathway prepilin signal peptidase PulO and related peptidase; InterPro IPR010627:IPR000045; KEGG: ddf:DEFDS_0112 type IV prepilin peptidase; PFAM: Peptidase A24A, N-terminal; Peptidase A24A, prepilin type IV; PRIAM: Prepilin peptidase; SPTR: Type IV prepilin peptidase; tyrosyl-tRNA synthetase 2073601 10816264 Flexsi_1943 Flexistipes sinusarabici DSM 4947 tyrosyl-tRNA synthetase YP_004604140.1 2072402 R 717231 CDS YP_004604141.1 336324174 10816265 complement(2073611..2074393) 1 NC_015672.1 PFAM: Bacterial Peptidase A24 N-terminal domain; Type IV leader peptidase family; COGs: COG3494 conserved hypothetical protein; InterPro IPR010415; KEGG: ddf:DEFDS_0110 hypothetical protein; PFAM: Protein of unknown function DUF1009; SPTR: Putative uncharacterized protein; prepilin peptidase 2074393 10816265 Flexsi_1944 Flexistipes sinusarabici DSM 4947 prepilin peptidase YP_004604141.1 2073611 R 717231 CDS YP_004604142.1 336324175 10816266 complement(2074509..2075327) 1 NC_015672.1 PFAM: Protein of unknown function (DUF1009); COGs: COG0673 dehydrogenase and related protein; InterPro IPR000683; KEGG: cni:Calni_0305 oxidoreductase domain protein; PFAM: Oxidoreductase, N-terminal; SPTR: Oxidoreductase domain protein; hypothetical protein 2075327 10816266 Flexsi_1945 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604142.1 2074509 R 717231 CDS YP_004604143.1 336324176 10816267 complement(2075324..2076298) 1 NC_015672.1 PFAM: Oxidoreductase family, NAD-binding Rossmann fold; COGs: COG1043 Acyl-(acyl carrier protein); InterPro IPR010137:IPR001451; KEGG: cni:Calni_0304 acyl-(acyl-carrier-protein)--UDP-N-acetylglucosa mineo-acyltransferase; PRIAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgluc osamineO-acyltransferase; SPTR:Acyl-(Acyl-carrier-protein)--UDP-N-acetylgluco samineO-acyltransferase; TIGRFAM:Acyl-[acyl-carrier-protein]--UDP-N-acetylgl ucosamineO-acyltransferase; oxidoreductase domain-containing protein 2076298 10816267 Flexsi_1946 Flexistipes sinusarabici DSM 4947 oxidoreductase domain-containing protein YP_004604143.1 2075324 R 717231 CDS YP_004604144.1 336324177 10816268 complement(2076301..2077071) 1 NC_015672.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase; COGs: COG0764 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratase; HAMAP: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; InterPro IPR010084:IPR013114; KEGG: ddf:DEFDS_0107 3R-hydroxymyristoyl ACP dehydrase; PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase, FabA/FabZ; SPTR: (3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; TIGRFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabZ; acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase 2077071 10816268 Flexsi_1947 Flexistipes sinusarabici DSM 4947 acyl-(acyl-carrier-protein)--UDP-N- acetylglucosamine O-acyltransferase YP_004604144.1 2076301 R 717231 CDS YP_004604145.1 336324178 10816269 complement(2077068..2077502) 1 NC_015672.1 PFAM: FabA-like domain; TIGRFAM: beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ; COGs: COG1044 UDP-3-O-(3-hydroxymyristoyl); HAMAP: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR007691:IPR001451; KEGG: cni:Calni_0302 udp-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase; PFAM: Bacterial transferase hexapeptide repeat; SPTR: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; (3R)-hydroxymyristoyl-ACP dehydratase 2077502 10816269 Flexsi_1948 Flexistipes sinusarabici DSM 4947 (3R)-hydroxymyristoyl-ACP dehydratase YP_004604145.1 2077068 R 717231 CDS YP_004604146.1 336324179 10816270 complement(2077492..2078511) 1 NC_015672.1 PFAM: Bacterial transferase hexapeptide (three repeats); TIGRFAM: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; InterPro IPR005632; KEGG: ddf:DEFDS_0105 outer membrane protein OmpH; PFAM: Outer membrane chaperone Skp (OmpH); SPTR: Outer membrane protein OmpH; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 2078511 10816270 Flexsi_1949 Flexistipes sinusarabici DSM 4947 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_004604146.1 2077492 R 717231 CDS YP_004604147.1 336324180 10816271 complement(2078514..2079038) 1 NC_015672.1 PFAM: Outer membrane protein (OmpH-like); COGs: COG4775 Outer membrane protein/protective antigen OMA87; InterPro IPR016474:IPR010827:IPR000184; KEGG: ddf:DEFDS_0104 hypothetical protein; PFAM: Bacterial surface antigen (D15); Surface antigen variable number; SPTR: Putative uncharacterized protein; TIGRFAM: Outer membrane assembly protein, YaeT; outer membrane chaperone Skp 2079038 10816271 Flexsi_1950 Flexistipes sinusarabici DSM 4947 outer membrane chaperone Skp YP_004604147.1 2078514 R 717231 CDS YP_004604148.1 336324181 10816272 complement(2079066..2081300) 1 NC_015672.1 PFAM: Surface antigen variable number repeat; Surface antigen; TIGRFAM: outer membrane protein assembly complex, YaeT protein; COGs: COG0040 ATP phosphoribosyltransferase; HAMAP: ATP phosphoribosyltransferase; InterPro IPR013820; KEGG: cni:Calni_0299 ATP phosphoribosyltransferase (homohexameric); PFAM: ATP phosphoribosyltransferase, catalytic region; PRIAM: ATP phosphoribosyltransferase; SPTR: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase, catalytic region; outer membrane protein assembly complex, YaeT protein 2081300 10816272 Flexsi_1951 Flexistipes sinusarabici DSM 4947 outer membrane protein assembly complex, YaeT protein YP_004604148.1 2079066 R 717231 CDS YP_004604149.1 336324182 10816273 complement(2081305..2081928) 1 NC_015672.1 PFAM: ATP phosphoribosyltransferase; TIGRFAM: ATP phosphoribosyltransferase; COGs: COG0766 UDP-N-acetylglucosamine enolpyruvyl transferase; HAMAP: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; InterPro IPR005750:IPR001986; KEGG: cni:Calni_0298 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: 3-phosphoshikimate 1-carboxyvinyltransferase, core; PRIAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; SPTR: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; ATP phosphoribosyltransferase 2081928 10816273 Flexsi_1952 Flexistipes sinusarabici DSM 4947 ATP phosphoribosyltransferase YP_004604149.1 2081305 R 717231 CDS YP_004604150.1 336324183 10816274 complement(2081921..2083180) 1 NC_015672.1 PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase); TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; COGs: COG2890 Methylase of polypeptide chain release factors; InterPro IPR004556:IPR019874:IPR013217; KEGG: ddf:DEFDS_0101 modification methylase HemK family; PFAM: Methyltransferase type 12; SPTR: Modification methylase, HemK family; TIGRFAM: Protein-(glutamine-N5) methyltransferase, release factor-specific; Modification methylase HemK; UDP-N-acetylglucosamine1- carboxyvinyltransferase 2083180 10816274 Flexsi_1953 Flexistipes sinusarabici DSM 4947 UDP-N-acetylglucosamine1- carboxyvinyltransferase YP_004604150.1 2081921 R 717231 CDS YP_004604151.1 336324184 10816275 complement(2083168..2083998) 1 NC_015672.1 PFAM: Methyltransferase small domain; TIGRFAM: HemK family putative methylases; protein-(glutamine-N5) methyltransferase, release factor-specific; COGs: COG0216 Protein chain release factor A; HAMAP: Peptide chain release factor 1; InterPro IPR004373:IPR005139:IPR000352; KEGG: ddf:DEFDS_0100 peptide chain release factor RF-1; PFAM: Class I peptide chain release factor; Peptide chain release factor; SPTR: Peptide chain release factor 1; TIGRFAM: Peptide chain release factor 1; protein-(glutamine-N5) methyltransferase 2083998 10816275 Flexsi_1954 Flexistipes sinusarabici DSM 4947 protein-(glutamine-N5) methyltransferase YP_004604151.1 2083168 R 717231 CDS YP_004604152.1 336324185 10816276 complement(2084006..2085076) 1 NC_015672.1 PFAM: PCRF domain; RF-1 domain; TIGRFAM: peptide chain release factor 1; COGs: COG3872 metal-dependent protein; InterPro IPR010787; KEGG: cni:Calni_0295 hypothetical protein; PFAM: Protein of unknown function DUF1385; SPTR: Putative uncharacterized protein; peptide chain release factor 1 2085076 10816276 Flexsi_1955 Flexistipes sinusarabici DSM 4947 peptide chain release factor 1 YP_004604152.1 2084006 R 717231 CDS YP_004604153.1 336324186 10816277 complement(2085069..2085977) 1 NC_015672.1 PFAM: Protein of unknown function (DUF1385); COGs: COG1351 alternative thymidylate synthase; HAMAP: Thymidylate synthase thyX; InterPro IPR003669; KEGG: cni:Calni_0294 thymidylate synthase (fad); PFAM: Thymidylate synthase ThyX; SPTR: Thymidylate synthase thyX; TIGRFAM: Thymidylate synthase ThyX; hypothetical protein 2085977 10816277 Flexsi_1956 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604153.1 2085069 R 717231 CDS YP_004604154.1 336324187 10816278 complement(2086164..2086898) 1 NC_015672.1 PFAM: Thymidylate synthase complementing protein; TIGRFAM: thymidylate synthase, flavin-dependent; COGs: COG0254 Ribosomal protein L31; HAMAP: 50S ribosomal protein L31; InterPro IPR002150; KEGG: ddf:DEFDS_0097 50S ribosomal protein L31; PFAM: Ribosomal protein L31; SPTR: 50S ribosomal protein L31; TIGRFAM: Ribosomal protein L31; thymidylate synthase ThyX 2086898 10816278 Flexsi_1957 Flexistipes sinusarabici DSM 4947 thymidylate synthase ThyX YP_004604154.1 2086164 R 717231 CDS YP_004604155.1 336324188 10816279 complement(2086914..2087144) 1 NC_015672.1 PFAM: Ribosomal protein L31; TIGRFAM: ribosomal protein L31; COGs: COG0103 Ribosomal protein S9; InterPro IPR000754; KEGG: ddf:DEFDS_0248 30S ribosomal protein S9; PFAM: Ribosomal protein S9; SPTR: 30S ribosomal protein S9; 50S ribosomal protein L31 2087144 10816279 Flexsi_1958 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L31 YP_004604155.1 2086914 R 717231 CDS YP_004604156.1 336324189 10816280 complement(2087614..2088003) 1 NC_015672.1 PFAM: Ribosomal protein S9/S16; COGs: COG0102 Ribosomal protein L13; InterPro IPR005823:IPR005822; KEGG: ddf:DEFDS_0249 50S ribosomal protein L13; PFAM: Ribosomal protein L13; SPTR: 50S ribosomal protein L13; TIGRFAM: Ribosomal protein L13, bacterial-type; 30S ribosomal protein S9 2088003 10816280 Flexsi_1959 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S9 YP_004604156.1 2087614 R 717231 CDS YP_004604157.1 336324190 10816281 complement(2088015..2088440) 1 NC_015672.1 PFAM: Ribosomal protein L13; TIGRFAM: ribosomal protein L13, bacterial type; COGs: COG0335 Ribosomal protein L19; HAMAP: Ribosomal protein L19; InterPro IPR001857; KEGG: cni:Calni_2013 LSU ribosomal protein l19p; PFAM: Ribosomal protein L19; SPTR: 50S ribosomal protein L19; TIGRFAM: Ribosomal protein L19; 50S ribosomal protein L13 2088440 10816281 Flexsi_1960 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L13 YP_004604157.1 2088015 R 717231 CDS YP_004604158.1 336324191 10816282 complement(2088503..2088859) 1 NC_015672.1 PFAM: Ribosomal protein L19; TIGRFAM: ribosomal protein L19, bacterial type; COGs: COG0336 tRNA-(guanine-N1)-methyltransferase; HAMAP: tRNA (guanine-N1-)-methyltransferase, bacteria; InterPro IPR002649:IPR016009:IPR019230; KEGG: ddf:DEFDS_0251 tRNA (guanine-N(1)-)-methyltransferase; PFAM: Protein of unknown function DUF2168; tRNA (guanine-N1-)-methyltransferase; PRIAM: tRNA (guanine-N(1)-)-methyltransferase; SPTR: tRNA (guanine-N(1)-)-methyltransferase; TIGRFAM: tRNA (guanine-N1-)-methyltransferase, bacteria; 50S ribosomal protein L19 2088859 10816282 Flexsi_1961 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L19 YP_004604158.1 2088503 R 717231 CDS YP_004604159.1 336324192 10816283 complement(2088856..2090160) 1 NC_015672.1 PFAM: tRNA (Guanine-1)-methyltransferase; Uncharacterized protein conserved in bacteria (DUF2168); TIGRFAM: tRNA (guanine-N1)-methyltransferase; COGs: COG0806 RimM protein required for 16S rRNA processing; HAMAP: 16S rRNA processing protein RimM; InterPro IPR011961:IPR002676:IPR007903; KEGG: cni:Calni_2011 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel; SPTR: Ribosome maturation factor rimM; TIGRFAM: 16S rRNA processing protein RimM; tRNA (guanine-N(1)-)-methyltransferase 2090160 10816283 Flexsi_1962 Flexistipes sinusarabici DSM 4947 tRNA (guanine-N(1)-)-methyltransferase YP_004604159.1 2088856 R 717231 CDS YP_004604160.1 336324193 10816284 complement(2090147..2090689) 1 NC_015672.1 PFAM: PRC-barrel domain; RimM N-terminal domain; TIGRFAM: 16S rRNA processing protein RimM; COGs: COG1837 RNA-binding protein (contains KH domain); HAMAP: Uncharacterised protein family UPF0109, bacterial; InterPro IPR020627; KEGG: ddf:DEFDS_0253 hypothetical protein; SPTR: Putative uncharacterized protein; ribosome maturation factor rimM 2090689 10816284 Flexsi_1963 Flexistipes sinusarabici DSM 4947 ribosome maturation factor rimM YP_004604160.1 2090147 R 717231 CDS YP_004604161.1 336324194 10816285 complement(2090704..2090934) 1 NC_015672.1 PFAM: KH domain; COGs: COG0228 Ribosomal protein S16; HAMAP: Ribosomal protein S16; InterPro IPR000307; KEGG: cni:Calni_2009 SSU ribosomal protein s16p; PFAM: Ribosomal protein S16; SPTR: 30S ribosomal protein S16; TIGRFAM: Ribosomal protein S16; hypothetical protein 2090934 10816285 Flexsi_1964 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604161.1 2090704 R 717231 CDS YP_004604162.1 336324195 10816286 complement(2090956..2091234) 1 NC_015672.1 PFAM: Ribosomal protein S16; TIGRFAM: ribosomal protein S16; COGs: COG0541 Signal recognition particle GTPase; InterProIPR004780:IPR003593:IPR013822:IPR000897:IPR 004125; KEGG: ddf:DEFDS_0255 signal recognition particle protein; PFAM: Signal recognition particle, SRP54 subunit, GTPase; Signal recognition particle, SRP54 subunit, helical bundle; Signal recognition particle, SRP54 subunit, M-domain; SMART: ATPase, AAA+ type, core; SPTR: Signal recognition particle protein; TIGRFAM: Signal recognition particle, SRP; 30S ribosomal protein S16 2091234 10816286 Flexsi_1965 Flexistipes sinusarabici DSM 4947 30S ribosomal protein S16 YP_004604162.1 2090956 R 717231 CDS YP_004604163.1 336324196 10816287 complement(2091252..2092601) 1 NC_015672.1 PFAM: SRP54-type protein, GTPase domain; SRP54-type protein, helical bundle domain; Signal peptide binding domain; TIGRFAM: signal recognition particle protein; COGs: COG0237 Dephospho-CoA kinase; HAMAP: Dephospho-CoA kinase; InterPro IPR001977; KEGG: ddf:DEFDS_0315 dephospho-CoA kinase; PRIAM: Dephospho-CoA kinase; SPTR: Dephospho-CoA kinase; TIGRFAM: Dephospho-CoA kinase; signal recognition particle protein 2092601 10816287 Flexsi_1966 Flexistipes sinusarabici DSM 4947 signal recognition particle protein YP_004604163.1 2091252 R 717231 CDS YP_004604164.1 336324197 10816288 complement(2092910..2093545) 1 NC_015672.1 PFAM: Dephospho-CoA kinase; TIGRFAM: dephospho-CoA kinase; InterPro IPR005358; KEGG: ddf:DEFDS_0314 hypothetical protein; PFAM: Uncharacterised protein family UPF0153; SPTR: Putative uncharacterized protein; dephospho-CoA kinase 2093545 10816288 Flexsi_1967 Flexistipes sinusarabici DSM 4947 dephospho-CoA kinase YP_004604164.1 2092910 R 717231 CDS YP_004604165.1 336324198 10816289 complement(2093559..2093810) 1 NC_015672.1 COGs: COG0179 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1 7-dioic acid hydratase (catechol pathway); InterPro IPR002529; KEGG: ddf:DEFDS_0313 fumarylacetoacetate hydrolase family protein; PFAM: Fumarylacetoacetase, C-terminal-like; PRIAM: 5-carboxymethyl-2-hydroxymuconate Delta-isomerase; SPTR: Fumarylacetoacetate hydrolase family protein; hypothetical protein 2093810 10816289 Flexsi_1968 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604165.1 2093559 R 717231 CDS YP_004604166.1 336324199 10816290 complement(2093794..2094552) 1 NC_015672.1 PFAM: Domain of unknown function (DUF2437); Fumarylacetoacetate (FAA) hydrolase family; COGs: COG0617 tRNA nucleotidyltransferase/poly(A) polymerase; InterPro IPR006675:IPR003607:IPR002646:IPR006674; KEGG: ddf:DEFDS_0057 tRNA nucleotidyltransferase (CCA-adding enzyme); PFAM: Polynucleotide adenylyltransferase region; Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: tRNA nucleotidyltransferase (CCA-adding enzyme); TIGRFAM: HDIG; 5-carboxymethyl-2-hydroxymuconate delta-isomerase 2094552 10816290 Flexsi_1969 Flexistipes sinusarabici DSM 4947 5-carboxymethyl-2-hydroxymuconate delta-isomerase YP_004604166.1 2093794 R 717231 CDS YP_004604167.1 336324200 10816291 complement(2094552..2095910) 1 NC_015672.1 PFAM: HD domain; Poly A polymerase head domain; TIGRFAM: uncharacterized domain HDIG; COGs: COG0622 phosphoesterase; InterPro IPR000979:IPR004843; KEGG: cni:Calni_1754 phosphodiesterase, mj0936 family; PFAM: Metallophosphoesterase; SPTR: Phosphodiesterase, MJ0936 family; TIGRFAM: Uncharacterised protein family UPF0025; polynucleotide adenylyltransferase/metal dependent phosphohydrolase 2095910 10816291 Flexsi_1970 Flexistipes sinusarabici DSM 4947 polynucleotide adenylyltransferase/metal dependent phosphohydrolase YP_004604167.1 2094552 R 717231 CDS YP_004604168.1 336324201 10816292 2096003..2096491 1 NC_015672.1 PFAM: Calcineurin-like phosphoesterase; TIGRFAM: phosphoesterase, MJ0936 family; COGs: COG2509 Uncharacterized FAD-dependent dehydrogenase; InterPro IPR006076; KEGG: ddf:DEFDS_0059 FAD dependent oxidoreductase; PFAM: FAD dependent oxidoreductase; SPTR: FAD dependent oxidoreductase; phosphodiesterase 2096491 10816292 Flexsi_1971 Flexistipes sinusarabici DSM 4947 phosphodiesterase YP_004604168.1 2096003 D 717231 CDS YP_004604169.1 336324202 10816293 2096493..2097860 1 NC_015672.1 PFAM: FAD dependent oxidoreductase; KEGG: cni:Calni_0426 hypothetical protein; SPTR: Putative uncharacterized protein; FAD dependent oxidoreductase 2097860 10816293 Flexsi_1972 Flexistipes sinusarabici DSM 4947 FAD dependent oxidoreductase YP_004604169.1 2096493 D 717231 CDS YP_004604170.1 336324203 10816294 complement(2097865..2098269) 1 NC_015672.1 InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; hypothetical protein 2098269 10816294 Flexsi_1973 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604170.1 2097865 R 717231 CDS YP_004604171.1 336324204 10816295 2098485..2099804 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG1158 Transcription termination factor; InterProIPR004665:IPR011129:IPR003593:IPR011112:IPR 011113:IPR000194; KEGG: ddf:DEFDS_0096 transcription termination factor Rho; PFAM: ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain; Rho termination factor, RNA-binding; Rho termination factor, N-terminal; SMART: Cold shock protein; ATPase, AAA+ type, core; SPTR: Transcription termination factor Rho; TIGRFAM: Transcription termination factor Rho; transposase IS4 family protein 2099804 10816295 Flexsi_1974 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604171.1 2098485 D 717231 CDS YP_004604172.1 336324205 10816296 2100311..2101552 1 NC_015672.1 PFAM: Rho termination factor, N-terminal domain; Rho termination factor, RNA-binding domain; ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: transcription termination factor Rho; InterPro IPR015414; KEGG: dol:Dole_2781 SNARE associated Golgi protein; PFAM: SNARE associated Golgi protein; SPTR: Putative uncharacterized protein; transcription termination factor Rho 2101552 10816296 Flexsi_1975 Flexistipes sinusarabici DSM 4947 transcription termination factor Rho YP_004604172.1 2100311 D 717231 CDS YP_004604173.1 336324206 10816297 2101915..2102559 1 NC_015672.1 PFAM: SNARE associated Golgi protein; KEGG: drt:Dret_2127 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2102559 10816297 Flexsi_1976 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604173.1 2101915 D 717231 CDS YP_004604174.1 336324207 10816298 2102580..2104841 1 NC_015672.1 COGs: COG1687 branched-chain amino acid permease (azaleucine resistance); InterPro IPR008407; KEGG: sdl:Sdel_1541 branched-chain amino acid transport; PFAM: Branched-chain amino acid transport; SPTR: Branched-chain amino acid transport; hypothetical protein 2104841 10816298 Flexsi_1977 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604174.1 2102580 D 717231 CDS YP_004604175.1 336324208 10816299 complement(2104865..2105185) 1 NC_015672.1 PFAM: Branched-chain amino acid transport protein (AzlD); COGs: COG1296 branched-chain amino acid permease (azaleucine resistance); InterPro IPR011606; KEGG: wsu:WS1320 hypothetical protein; PFAM: AzlC-like; SPTR: Putative uncharacterized protein; branched-chain amino acid transport 2105185 10816299 Flexsi_1978 Flexistipes sinusarabici DSM 4947 branched-chain amino acid transport YP_004604175.1 2104865 R 717231 CDS YP_004604176.1 336324209 10816300 complement(2105178..2105837) 1 NC_015672.1 PFAM: AzlC protein; TIGRFAM: 4-azaleucine resistance probable transporter AzlC; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; AzlC family protein 2105837 10816300 Flexsi_1979 Flexistipes sinusarabici DSM 4947 AzlC family protein YP_004604176.1 2105178 R 717231 CDS YP_004604177.1 336324210 10816301 complement(2106274..2107593) 1 NC_015672.1 PFAM: Transposase DDE domain; transposase IS4 family protein 2107593 10816301 Flexsi_1980 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604177.1 2106274 R 717231 CDS YP_004604178.1 336324211 10816307 complement(2113991..2115058) 1 NC_015672.1 PFAM: Chorismate synthase; TIGRFAM: chorismate synthase; COGs: COG1993 conserved hypothetical protein; InterPro IPR003793; KEGG: ddf:DEFDS_0610 hypothetical protein; PFAM: Protein of unknown function DUF190; SPTR: Putative uncharacterized protein; chorismate synthase 2115058 10816307 Flexsi_1981 Flexistipes sinusarabici DSM 4947 chorismate synthase YP_004604178.1 2113991 R 717231 CDS YP_004604179.1 336324212 10816308 complement(2115070..2115399) 1 NC_015672.1 PFAM: Uncharacterized ACR, COG1993; COGs: COG0239 Integral membrane protein possibly involved in chromosome condensation; HAMAP: CrcB-like protein; InterPro IPR003691; KEGG: dap:Dacet_1834 CrcB protein; PFAM: Camphor resistance CrcB protein; SPTR: Protein CrcB homolog; TIGRFAM: Camphor resistance CrcB protein; hypothetical protein 2115399 10816308 Flexsi_1982 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604179.1 2115070 R 717231 CDS YP_004604180.1 336324213 10816309 complement(2115396..2115776) 1 NC_015672.1 PFAM: CrcB-like protein; TIGRFAM: crcB protein; KEGG: ddf:DEFDS_0608 hypothetical protein; SPTR: Putative uncharacterized protein; manually curated; CrcB-like protein 2115776 10816309 Flexsi_1983 Flexistipes sinusarabici DSM 4947 CrcB-like protein YP_004604180.1 2115396 R 717231 CDS YP_004604181.1 336324214 10816310 2115812..2116066 1 NC_015672.1 COGs: COG1064 Zn-dependent alcohol dehydrogenase; InterPro IPR014187:IPR013154; KEGG: ddf:DEFDS_1932 alcohol dehydrogenase zinc-binding; PFAM: Alcohol dehydrogenase GroES-like; SPTR: Alcohol dehydrogenase, zinc-binding; TIGRFAM: Alcohol dehydrogenase, zinc-binding type 2; hypothetical protein 2116066 10816310 Flexsi_1984 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604181.1 2115812 D 717231 CDS YP_004604182.1 336324215 10816311 complement(2116222..2117250) 1 NC_015672.1 PFAM: Alcohol dehydrogenase GroES-like domain; TIGRFAM: zinc-binding alcohol dehydrogenase family protein; COGs: COG1022 Long-chain acyl-CoA synthetase (AMP-forming); InterPro IPR000873; KEGG: dba:Dbac_1690 AMP-dependent synthetase and ligase; PFAM: AMP-dependent synthetase/ligase; PRIAM: Long-chain-fatty-acid--CoA ligase; SPTR: AMP-dependent synthetase and ligase; zinc-binding alcohol dehydrogenase family protein 2117250 10816311 Flexsi_1985 Flexistipes sinusarabici DSM 4947 zinc-binding alcohol dehydrogenase family protein YP_004604182.1 2116222 R 717231 CDS YP_004604183.1 336324216 10816312 complement(2117413..2119314) 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG2519 tRNA(1-methyladenosine) methyltransferase and related methyltransferase; InterPro IPR014816; KEGG: cni:Calni_0752 tRNA (adenine-58-n(1)-) methyltransferase; PFAM: tRNA methyltransferase complex GCD14 subunit; PRIAM: tRNA (adenine-N(1)-)-methyltransferase; SPTR: tRNA (Adenine-58-N(1)-) methyltransferase; long-chain-fatty-acid--CoA ligase 2119314 10816312 Flexsi_1986 Flexistipes sinusarabici DSM 4947 long-chain-fatty-acid--CoA ligase YP_004604183.1 2117413 R 717231 CDS YP_004604184.1 336324217 10816313 2119523..2120302 1 NC_015672.1 PFAM: tRNA methyltransferase complex GCD14 subunit; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; tRNA (adenine-N(1)-)-methyltransferase 2120302 10816313 Flexsi_1987 Flexistipes sinusarabici DSM 4947 tRNA (adenine-N(1)-)-methyltransferase YP_004604184.1 2119523 D 717231 CDS YP_004604185.1 336324218 10816314 complement(2120660..2121673) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; InterPro IPR009875; PFAM: Type IV pilus assembly PilZ; transposase IS116/IS110/IS902 family protein 2121673 10816314 Flexsi_1988 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004604185.1 2120660 R 717231 CDS YP_004604186.1 336324219 10816315 2122572..2123243 1 NC_015672.1 PFAM: PilZ domain; COGs: COG3437 Response regulator containing a CheY-like receiver domain and an HD-GYP domain; InterPro IPR003607:IPR006674; KEGG: dau:Daud_1728 putative PAS/PAC sensor protein; PFAM: Metal-dependent phosphohydrolase, HD region, subdomain; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: Putative PAS/PAC sensor protein; type IV pilus assembly PilZ 2123243 10816315 Flexsi_1989 Flexistipes sinusarabici DSM 4947 type IV pilus assembly PilZ YP_004604186.1 2122572 D 717231 CDS YP_004604187.1 336324220 10816316 complement(2123233..2124573) 1 NC_015672.1 PFAM: HD domain; TIGRFAM: uncharacterized domain HDIG; InterPro IPR010177; KEGG: ddf:DEFDS_0760 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; metal dependent phosphohydrolase 2124573 10816316 Flexsi_1990 Flexistipes sinusarabici DSM 4947 metal dependent phosphohydrolase YP_004604187.1 2123233 R 717231 CDS YP_004604188.1 336324221 10816317 complement(2124892..2126526) 1 NC_015672.1 PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; cytochrome C family protein 2126526 10816317 Flexsi_1991 Flexistipes sinusarabici DSM 4947 cytochrome C family protein YP_004604188.1 2124892 R 717231 CDS YP_004604189.1 336324222 10816318 complement(2127080..2127181) 1 NC_015672.1 InterPro IPR001258; KEGG: ddf:DEFDS_0759 hypothetical protein; PFAM: NHL repeat; SPTR: Putative uncharacterized protein; hypothetical protein 2127181 10816318 Flexsi_1992 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604189.1 2127080 R 717231 CDS YP_004604190.1 336324223 10816319 complement(2127302..2128279) 1 NC_015672.1 PFAM: NHL repeat; KEGG: ddf:DEFDS_0758 hypothetical protein; SPTR: Putative uncharacterized protein; NHL repeat containing protein 2128279 10816319 Flexsi_1993 Flexistipes sinusarabici DSM 4947 NHL repeat containing protein YP_004604190.1 2127302 R 717231 CDS YP_004604191.1 336324224 10816320 complement(2128233..2129198) 1 NC_015672.1 KEGG: ddf:DEFDS_0757 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2129198 10816320 Flexsi_1994 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604191.1 2128233 R 717231 CDS YP_004604192.1 336324225 10816321 complement(2129137..2131572) 1 NC_015672.1 KEGG: ddf:DEFDS_0756 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 2131572 10816321 Flexsi_1995 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604192.1 2129137 R 717231 CDS YP_004604193.1 336324226 10816322 complement(2131569..2132066) 1 NC_015672.1 PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; KEGG: ddf:DEFDS_0755 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; multiheme C-type cytochrome 2132066 10816322 Flexsi_1996 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004604193.1 2131569 R 717231 CDS YP_004604194.1 336324227 10816323 complement(2133042..2133749) 1 NC_015672.1 InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; multiheme C-type cytochrome 2133749 10816323 Flexsi_1997 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004604194.1 2133042 R 717231 CDS YP_004604195.1 336324228 10816324 2134004..2135371 1 NC_015672.1 PFAM: Transposase domain (DUF772); KEGG: ddf:DEFDS_0754 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; transposase IS4 family protein 2135371 10816324 Flexsi_1998 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604195.1 2134004 D 717231 CDS YP_004604196.1 336324229 10816325 complement(2135430..2136011) 1 NC_015672.1 COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR003593:IPR002078:IPR002197; KEGG: ddf:DEFDS_0752 two-component system, NtrC family, response regulator AtoC; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, response regulator AtoC; multiheme C-type cytochrome 2136011 10816325 Flexsi_1999 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004604196.1 2135430 R 717231 CDS YP_004604197.1 336324230 10816326 complement(2136863..2138179) 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: ddf:DEFDS_0751 hypothetical protein; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SPTR: Putative uncharacterized protein; Fis family two component sigma-54 specific transcriptional regulator 2138179 10816326 Flexsi_2000 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004604197.1 2136863 R 717231 CDS YP_004604198.1 336324231 10816327 complement(2138169..2139521) 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; InterPro IPR001258; KEGG: ddf:DEFDS_0750 hypothetical protein; PFAM: NHL repeat; SPTR: Putative uncharacterized protein; integral membrane sensor signal transduction histidine kinase 2139521 10816327 Flexsi_2001 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004604198.1 2138169 R 717231 CDS YP_004604199.1 336324232 10816328 complement(2139529..2140623) 1 NC_015672.1 PFAM: NHL repeat; InterPro IPR010177; KEGG: ddf:DEFDS_0749 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; NHL repeat containing protein 2140623 10816328 Flexsi_2002 Flexistipes sinusarabici DSM 4947 NHL repeat containing protein YP_004604199.1 2139529 R 717231 CDS YP_004604200.1 336324233 10816329 complement(2140635..2141582) 1 NC_015672.1 PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; KEGG: ddf:DEFDS_0748 hypothetical protein; SPTR: Putative uncharacterized protein; cytochrome C family protein 2141582 10816329 Flexsi_2003 Flexistipes sinusarabici DSM 4947 cytochrome C family protein YP_004604200.1 2140635 R 717231 CDS YP_004604201.1 336324234 10816330 complement(2141536..2142483) 1 NC_015672.1 InterPro IPR010177; KEGG: ddf:DEFDS_0747 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; hypothetical protein 2142483 10816330 Flexsi_2004 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604201.1 2141536 R 717231 CDS YP_004604202.1 336324235 10816331 complement(2142535..2143845) 1 NC_015672.1 PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; InterPro IPR010177; KEGG: ddf:DEFDS_0746 multiheme C-type cytochrome; PFAM: Doubled CXXCH motif; SPTR: Multiheme c-type cytochrome; TIGRFAM: Doubled CXXCH motif; cytochrome C family protein 2143845 10816331 Flexsi_2005 Flexistipes sinusarabici DSM 4947 cytochrome C family protein YP_004604202.1 2142535 R 717231 CDS YP_004604203.1 336324236 10816332 complement(2144521..2147568) 1 NC_015672.1 PFAM: Doubled CXXCH motif (Paired_CXXCH_1); TIGRFAM: doubled CXXCH domain; InterPro IPR001258; KEGG: ddf:DEFDS_0745 hypothetical protein; PFAM: NHL repeat; SPTR: Putative uncharacterized protein; cytochrome C family protein 2147568 10816332 Flexsi_2006 Flexistipes sinusarabici DSM 4947 cytochrome C family protein YP_004604203.1 2144521 R 717231 CDS YP_004604204.1 336324237 10816333 complement(2147565..2148449) 1 NC_015672.1 PFAM: NHL repeat; KEGG: ddf:DEFDS_0744 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; NHL repeat containing protein 2148449 10816333 Flexsi_2007 Flexistipes sinusarabici DSM 4947 NHL repeat containing protein YP_004604204.1 2147565 R 717231 CDS YP_004604205.1 336324238 10816334 complement(2148689..2149549) 1 NC_015672.1 KEGG: ddf:DEFDS_0743 hypothetical protein; SPTR: Putative uncharacterized protein; multiheme C-type cytochrome 2149549 10816334 Flexsi_2008 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004604205.1 2148689 R 717231 CDS YP_004604206.1 336324239 10816335 complement(2149553..2150455) 1 NC_015672.1 PFAM: Cytochrome b(N-terminal)/b6/petB; KEGG: ddf:DEFDS_0742 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; hypothetical protein 2150455 10816335 Flexsi_2009 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604206.1 2149553 R 717231 CDS YP_004604207.1 336324240 10816336 complement(2150457..2151494) 1 NC_015672.1 KEGG: ddf:DEFDS_0741 multiheme C-type cytochrome; SPTR: Multiheme c-type cytochrome; multiheme C-type cytochrome 2151494 10816336 Flexsi_2010 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004604207.1 2150457 R 717231 CDS YP_004604208.1 336324241 10816337 complement(2151510..2152511) 1 NC_015672.1 COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR001789; KEGG: ddf:DEFDS_0740 signal transduction response regulator; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; PRIAM: Diguanylate kinase; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Signal transduction response regulator; TIGRFAM: Diguanylate cyclase, predicted; multiheme C-type cytochrome 2152511 10816337 Flexsi_2011 Flexistipes sinusarabici DSM 4947 multiheme C-type cytochrome YP_004604208.1 2151510 R 717231 CDS YP_004604209.1 336324242 10816338 complement(2153450..2154367) 1 NC_015672.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0526 Thiol-disulfide isomerase and thioredoxins; InterPro IPR000866; KEGG: ddf:DEFDS_1942 thioredoxin family protein; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; SPTR: Thioredoxin family protein; response regulator receiver modulated diguanylate cyclase 2154367 10816338 Flexsi_2012 Flexistipes sinusarabici DSM 4947 response regulator receiver modulated diguanylate cyclase YP_004604209.1 2153450 R 717231 CDS YP_004604210.1 336324243 10816339 complement(2154561..2155085) 1 NC_015672.1 PFAM: AhpC/TSA family; COGs: COG1160 GTPase; HAMAP: GTP-binding, EngA; InterPro IPR016484:IPR005225:IPR002917; KEGG: ddf:DEFDS_1072 small GTP-binding protein; PFAM: GTP-binding protein, HSR1-related; SPTR: GTP-binding protein engA; TIGRFAM: GTP-binding, EngA; Small GTP-binding protein; alkyl hydroperoxide reductase 2155085 10816339 Flexsi_2013 Flexistipes sinusarabici DSM 4947 alkyl hydroperoxide reductase YP_004604210.1 2154561 R 717231 CDS YP_004604211.1 336324244 10816340 complement(2155232..2156566) 1 NC_015672.1 PFAM: GTPase of unknown function; TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein domain; COGs: COG0008 Glutamyl- and glutaminyl-tRNA synthetase; InterPro IPR004527:IPR020058; KEGG: ddf:DEFDS_1071 glutamyl-tRNA synthetase; PFAM: Glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain; PRIAM: Glutamate--tRNA ligase; SPTR: Glutamyl-tRNA synthetase; TIGRFAM: Glutamyl-tRNA synthetase, class Ic, bacterial/mitochondrial; GTP-binding protein engA 2156566 10816340 Flexsi_2014 Flexistipes sinusarabici DSM 4947 GTP-binding protein engA YP_004604211.1 2155232 R 717231 CDS YP_004604212.1 336324245 10816341 complement(2156570..2158024) 1 NC_015672.1 PFAM: tRNA synthetases class I (E and Q), catalytic domain; TIGRFAM: glutamyl-tRNA synthetase, bacterial family; COGs: COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain; InterPro IPR000160:IPR001789; KEGG: cni:Calni_2046 response regulator receiver modulated diguanylate cyclase; PFAM: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SMART: Diguanylate cyclase, predicted; Signal transduction response regulator, receiver region; SPTR: Response regulator receiver modulated diguanylate cyclase; TIGRFAM: Diguanylate cyclase, predicted; glutamyl-tRNA synthetase 2158024 10816341 Flexsi_2015 Flexistipes sinusarabici DSM 4947 glutamyl-tRNA synthetase YP_004604212.1 2156570 R 717231 CDS YP_004604213.1 336324246 10816342 2158090..2159406 1 NC_015672.1 PFAM: Response regulator receiver domain; GGDEF domain; TIGRFAM: diguanylate cyclase (GGDEF) domain; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805:IPR015890; KEGG: cni:Calni_0977 anthranilate synthase, component I; PFAM: Chorismate binding, C-terminal; Anthranilate synthase component I, N-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase, component I; response regulator receiver modulated diguanylate cyclase 2159406 10816342 Flexsi_2016 Flexistipes sinusarabici DSM 4947 response regulator receiver modulated diguanylate cyclase YP_004604213.1 2158090 D 717231 CDS YP_004604214.1 336324247 10816343 2159630..2161099 1 NC_015672.1 PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; COGs: COG0512 Anthranilate/para-aminobenzoate synthase component II; InterPro IPR006221:IPR000991; KEGG: ddf:DEFDS_0439 anthranilate synthase component II; PFAM: Glutamine amidotransferase class-I, C-terminal; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase component II; TIGRFAM: Glutamine amidotransferase of anthranilate synthase; anthranilate synthase 2161099 10816343 Flexsi_2017 Flexistipes sinusarabici DSM 4947 anthranilate synthase YP_004604214.1 2159630 D 717231 CDS YP_004604215.1 336324248 10816344 2161083..2161658 1 NC_015672.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase; COGs: COG0547 Anthranilate phosphoribosyltransferase; HAMAP: Anthranilate phosphoribosyl transferase; InterPro IPR005940:IPR017459:IPR000312; KEGG: cni:Calni_0979 anthranilate phosphoribosyltransferase; PFAM: Glycosyl transferase, family 3; Glycosyl transferase, family 3, N-terminal; PRIAM: Anthranilate phosphoribosyltransferase; SPTR: Anthranilate phosphoribosyltransferase; TIGRFAM: Anthranilate phosphoribosyl transferase; glutamine amidotransferase of anthranilate synthase 2161658 10816344 Flexsi_2018 Flexistipes sinusarabici DSM 4947 glutamine amidotransferase of anthranilate synthase YP_004604215.1 2161083 D 717231 CDS YP_004604216.1 336324249 10816345 2161651..2162646 1 NC_015672.1 PFAM: Glycosyl transferase family, a/b domain; Glycosyl transferase family, helical bundle domain; TIGRFAM: anthranilate phosphoribosyltransferase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798; KEGG: cni:Calni_0980 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol-phosphate synthase; anthranilate phosphoribosyltransferase 2162646 10816345 Flexsi_2019 Flexistipes sinusarabici DSM 4947 anthranilate phosphoribosyltransferase YP_004604216.1 2161651 D 717231 CDS YP_004604217.1 336324250 10816346 2162647..2163393 1 NC_015672.1 PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0135 Phosphoribosylanthranilate isomerase; InterPro IPR001240; KEGG: ddf:DEFDS_0442 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI); SPTR: N-(5'-phosphoribosyl)anthranilate isomerase; indole-3-glycerol-phosphate synthase 2163393 10816346 Flexsi_2020 Flexistipes sinusarabici DSM 4947 indole-3-glycerol-phosphate synthase YP_004604217.1 2162647 D 717231 CDS YP_004604218.1 336324251 10816347 2163394..2163936 1 NC_015672.1 PFAM: N-(5'phosphoribosyl)anthranilate (PRA) isomerase; COGs: COG0133 Tryptophan synthase beta chain; HAMAP: Tryptophan synthase beta chain; InterPro IPR006654:IPR001926; KEGG: ddf:DEFDS_0443 tryptophan synthase subunit beta; PFAM: Pyridoxal phosphate-dependent enzyme, beta subunit; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase beta chain 1; TIGRFAM: Tryptophan synthase, beta chain; N-(5 -phosphoribosyl)anthranilate isomerase 2163936 10816347 Flexsi_2021 Flexistipes sinusarabici DSM 4947 N-(5 -phosphoribosyl)anthranilate isomerase YP_004604218.1 2163394 D 717231 CDS YP_004604219.1 336324252 10816348 2163977..2165146 1 NC_015672.1 PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: tryptophan synthase, beta subunit; COGs: COG0159 Tryptophan synthase alpha chain; InterPro IPR002028; KEGG: cni:Calni_0983 tryptophan synthase, alpha subunit; PFAM: Tryptophan synthase, alpha chain; PRIAM: Tryptophan synthase; SPTR: Tryptophan synthase alpha chain; TIGRFAM: Tryptophan synthase, alpha chain; tryptophan synthase subunit beta 2165146 10816348 Flexsi_2022 Flexistipes sinusarabici DSM 4947 tryptophan synthase subunit beta YP_004604219.1 2163977 D 717231 CDS YP_004604220.1 336324253 10816349 2165143..2165865 1 NC_015672.1 PFAM: Tryptophan synthase alpha chain; TIGRFAM: tryptophan synthase, alpha subunit; KEGG: ddf:DEFDS_1681 hypothetical protein; SPTR: Putative uncharacterized protein; tryptophan synthase subunit alpha 2165865 10816349 Flexsi_2023 Flexistipes sinusarabici DSM 4947 tryptophan synthase subunit alpha YP_004604220.1 2165143 D 717231 CDS YP_004604221.1 336324254 10816350 complement(2166057..2166368) 1 NC_015672.1 PFAM: Nitrous oxide-stimulated promoter; KEGG: cni:Calni_0024 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2166368 10816350 Flexsi_2024 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604221.1 2166057 R 717231 CDS YP_004604222.1 336324255 10816351 complement(2166389..2166628) 1 NC_015672.1 COGs: COG1136 ABC-type antimicrobial peptide transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: cni:Calni_0023 abc transporter related protein; PFAM: ABC transporter-like; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter related protein; hypothetical protein 2166628 10816351 Flexsi_2025 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604222.1 2166389 R 717231 CDS YP_004604223.1 336324256 10816352 complement(2166852..2167856) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR003495; KEGG: cni:Calni_0022 cobalamin synthesis protein p47k; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; SPTR: Cobalamin synthesis protein P47K; ABC transporter-like protein 2167856 10816352 Flexsi_2026 Flexistipes sinusarabici DSM 4947 ABC transporter-like protein YP_004604223.1 2166852 R 717231 CDS YP_004604224.1 336324257 10816353 complement(2167868..2168551) 1 NC_015672.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; COGs: COG1840 ABC-type Fe3+ transport system periplasmic component; InterPro IPR015077; KEGG: cni:Calni_0021 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: Putative uncharacterized protein; cobalamin synthesis protein P47K 2168551 10816353 Flexsi_2027 Flexistipes sinusarabici DSM 4947 cobalamin synthesis protein P47K YP_004604224.1 2167868 R 717231 CDS YP_004604225.1 336324258 10816354 complement(2168548..2169777) 1 NC_015672.1 PFAM: Domain of unknown function (DUF1858); COGs: COG0752 Glycyl-tRNA synthetase alpha subunit; HAMAP: Glycyl-tRNA synthetase, class IIc, alpha subunit; InterPro IPR002310; KEGG: ddf:DEFDS_0639 glycyl-tRNA synthetase subunit alpha; PFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; PRIAM: Glycine--tRNA ligase; SPTR: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: Glycyl-tRNA synthetase, class IIc, alpha subunit; hypothetical protein 2169777 10816354 Flexsi_2028 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604225.1 2168548 R 717231 CDS YP_004604226.1 336324259 10816355 complement(2170081..2170956) 1 NC_015672.1 PFAM: Glycyl-tRNA synthetase alpha subunit; TIGRFAM: glycyl-tRNA synthetase, tetrameric type, alpha subunit; COGs: COG0137 Argininosuccinate synthase; HAMAP: Argininosuccinate synthase; InterPro IPR001518; KEGG: cni:Calni_0743 argininosuccinate synthase; PFAM: Argininosuccinate synthase; PRIAM: Argininosuccinate synthase; SPTR: Argininosuccinate synthase; TIGRFAM: Argininosuccinate synthase; glycyl-tRNA synthetase subunit alpha 2170956 10816355 Flexsi_2029 Flexistipes sinusarabici DSM 4947 glycyl-tRNA synthetase subunit alpha YP_004604226.1 2170081 R 717231 CDS YP_004604227.1 336324260 10816356 complement(2170989..2172200) 1 NC_015672.1 PFAM: Arginosuccinate synthase; TIGRFAM: argininosuccinate synthase; COGs: COG1473 Metal-dependent amidase/aminoacylase/carboxypeptidase; InterPro IPR010168:IPR002933:IPR011650; KEGG: ddf:DEFDS_1806 N-acetyl-L-amino acid amidohydrolase; PFAM: Peptidase M20; Peptidase M20, dimerisation; PRIAM: N-acetyldiaminopimelate deacetylase; SPTR: N-acetyl-L-amino acid amidohydrolase; TIGRFAM: Peptidase M20D, amidohydrolase; argininosuccinate synthase 2172200 10816356 Flexsi_2030 Flexistipes sinusarabici DSM 4947 argininosuccinate synthase YP_004604227.1 2170989 R 717231 CDS YP_004604228.1 336324261 10816357 complement(2172427..2173551) 1 NC_015672.1 PFAM: Peptidase family M20/M25/M40; Peptidase dimerisation domain; TIGRFAM: amidohydrolase; COGs: COG1921 Selenocysteine synthase [seryl-tRNASer selenium transferase]; HAMAP: L-seryl-tRNA(Sec) selenium transferase; InterPro IPR004534:IPR018319; KEGG: ddf:DEFDS_0273 L-seryl-tRNA(Sec) selenium transferase; PFAM: Pyridoxal phosphate-dependent transferase; PRIAM: L-seryl-tRNA(Sec) selenium transferase; SPTR: L-seryl-tRNA(Sec) selenium transferase; TIGRFAM: L-seryl-tRNA selenium transferase; amidohydrolase 2173551 10816357 Flexsi_2031 Flexistipes sinusarabici DSM 4947 amidohydrolase YP_004604228.1 2172427 R 717231 CDS YP_004604229.1 336324262 10816358 2174239..2175615 1 NC_015672.1 PFAM: L-seryl-tRNA selenium transferase; TIGRFAM: seryl-tRNA(sec) selenium transferase; COGs: COG3276 Selenocysteine-specific translation elongation factor; InterProIPR005225:IPR004535:IPR000795:IPR004161:IPR 015191; KEGG: ddf:DEFDS_0272 selenocysteine-specific translation elongation factor; PFAM: Protein synthesis factor, GTP-binding; Translation elongation factor EFTu/EF1A, domain 2; Translation elongation factor SelB, winged helix, type 3; SPTR: Selenocysteine-specific translation elongation factor; TIGRFAM: Translation elongation factor, selenocysteine-specific; Small GTP-binding protein; L-seryl-tRNA(Sec) selenium transferase 2175615 10816358 Flexsi_2032 Flexistipes sinusarabici DSM 4947 L-seryl-tRNA(Sec) selenium transferase YP_004604229.1 2174239 D 717231 CDS YP_004604230.1 336324263 10816359 2175591..2177456 1 NC_015672.1 PFAM: Elongation factor Tu domain 2; Elongation factor Tu GTP binding domain; Elongation factor SelB, winged helix; TIGRFAM: selenocysteine-specific elongation factor SelB; small GTP-binding protein domain; This gene is disrupted by insertion of repetitive element; manually curated; selenocysteine-specific translation elongation factor 2177456 10816359 Flexsi_2033 Flexistipes sinusarabici DSM 4947 selenocysteine-specific translation elongation factor YP_004604230.1 2175591 D 717231 CDS YP_004604231.1 336324264 10816361 2178427..2179746 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR007456; KEGG: dap:Dacet_0848 hypothetical protein; PFAM: Protein of unknown function DUF494; SPTR: Putative uncharacterized protein; transposase IS4 family protein 2179746 10816361 Flexsi_2035 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604231.1 2178427 D 717231 CDS YP_004604232.1 336324265 10816362 2180174..2180599 1 NC_015672.1 PFAM: Protein of unknown function (DUF494); COGs: COG0550 Topoisomerase IA; InterProIPR005733:IPR006154:IPR003601:IPR003602:IPR 006171:IPR013497:IPR013498; KEGG: ddf:DEFDS_1803 DNA topoisomerase I; PFAM: DNA topoisomerase, type IA, central; Toprim domain; DNA topoisomerase, type IA, zn finger; PRIAM: DNA topoisomerase; SMART: DNA topoisomerase, type IA, DNA-binding; DNA topoisomerase, type IA, domain 2; Toprim domain, subgroup; SPTR: DNA topoisomerase I; TIGRFAM: DNA topoisomerase I, bacterial-type; hypothetical protein 2180599 10816362 Flexsi_2036 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604232.1 2180174 D 717231 CDS YP_004604233.1 336324266 10816363 2180651..2183077 1 NC_015672.1 PFAM: Toprim domain; Topoisomerase DNA binding C4 zinc finger; DNA topoisomerase; TIGRFAM: DNA topoisomerase I, bacterial; COGs: COG1206 NAD(FAD)-utilizing enzyme possibly involved in translation; HAMAP:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferasetrmFO; InterPro IPR004417:IPR002218; KEGG: ddf:DEFDS_1802 glucose inhibited division protein A; PFAM: Glucose-inhibited division protein A-related; PRIAM:Methylenetetrahydrofolate--tRNA-(uracil-5-)-m ethyltransferase(FADH(2)-oxidizing); SPTR:Methylenetetrahydrofolate--tRNA-(uracil-5-)-me thyltransferaseTrmFO; TIGRFAM:Methylenetetrahydrofolate--tRNA-(uracil-5-) -methyltransferase,TrmFO; DNA topoisomerase I 2183077 10816363 Flexsi_2037 Flexistipes sinusarabici DSM 4947 DNA topoisomerase I YP_004604233.1 2180651 D 717231 CDS YP_004604234.1 336324267 10816364 2183077..2184411 1 NC_015672.1 PFAM: Glucose inhibited division protein A; TIGRFAM: tRNA:m(5)U-54 methyltransferase; COGs: COG4974 Site-specific recombinase XerD; HAMAP: Tyrosine recombinase xerC; InterPro IPR004107:IPR002104; KEGG: cni:Calni_1109 integrase family protein; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage; SPTR: Tyrosine recombinase xerC 2; methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO 2184411 10816364 Flexsi_2038 Flexistipes sinusarabici DSM 4947 methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase trmFO YP_004604234.1 2183077 D 717231 CDS YP_004604235.1 336324268 10816365 2184386..2185282 1 NC_015672.1 PFAM: Phage integrase, N-terminal SAM-like domain; Phage integrase family; COGs: COG0709 Selenophosphate synthase; InterPro IPR004536:IPR000728:IPR010918; KEGG: ddf:DEFDS_0345 selenide, water dikinase; PFAM: AIR synthase related protein; AIR synthase related protein, C-terminal; SPTR: Selenide, water dikinase; TIGRFAM: Selenide water dikinase; Tyrosine recombinase xerC 2185282 10816365 Flexsi_2039 Flexistipes sinusarabici DSM 4947 Tyrosine recombinase xerC YP_004604235.1 2184386 D 717231 CDS YP_004604236.1 336324269 10816366 complement(2185502..2186446) 1 NC_015672.1 PFAM: AIR synthase related protein, N-terminal domain; AIR synthase related protein, C-terminal domain; TIGRFAM: selenium donor protein; InterPro IPR019870:IPR001455; KEGG: ddf:DEFDS_0344 hypothetical protein; PFAM: SirA-like; SPTR: Putative uncharacterized protein; TIGRFAM: SirA-related, selenium metabolism; selenide, water dikinase 2186446 10816366 Flexsi_2040 Flexistipes sinusarabici DSM 4947 selenide, water dikinase YP_004604236.1 2185502 R 717231 CDS YP_004604237.1 336324270 10816367 complement(2186532..2187116) 1 NC_015672.1 PFAM: SirA-like protein; DsrE/DsrF-like family; TIGRFAM: selenium metabolism protein YedF; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: ddf:DEFDS_0343 aminotransferase I and II; PFAM: Aminotransferase, class I/II; SPTR: Aminotransferase, I and II; selenium metabolism protein YedF 2187116 10816367 Flexsi_2041 Flexistipes sinusarabici DSM 4947 selenium metabolism protein YedF YP_004604237.1 2186532 R 717231 CDS YP_004604238.1 336324271 10816368 complement(2187210..2188517) 1 NC_015672.1 PFAM: Aminotransferase class I and II; COGs: COG2230 Cyclopropane fatty acid synthase and related methyltransferase; InterPro IPR003333; KEGG: ddf:DEFDS_1472 cyclopropane-fatty-acyl-phospholipid synthase; PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; PRIAM: Cyclopropane-fatty-acyl-phospholipid synthase; SPTR: Cyclopropane-fatty-acyl-phospholipid synthase; class I and II aminotransferase 2188517 10816368 Flexsi_2042 Flexistipes sinusarabici DSM 4947 class I and II aminotransferase YP_004604238.1 2187210 R 717231 CDS YP_004604239.1 336324272 10816369 complement(2188666..2189781) 1 NC_015672.1 PFAM: Cyclopropane-fatty-acyl-phospholipid synthase; COGs: COG0640 transcriptional regulator protein; InterPro IPR001845; KEGG: chu:CHU_0540 ArsR family transcriptional regulator; PFAM: HTH transcriptional regulator, ArsR; SMART: HTH transcriptional regulator, ArsR; SPTR: ArsR family bacterial regulatory protein; cyclopropane-fatty-acyl-phospholipid synthase 2189781 10816369 Flexsi_2043 Flexistipes sinusarabici DSM 4947 cyclopropane-fatty-acyl-phospholipid synthase YP_004604239.1 2188666 R 717231 CDS YP_004604240.1 336324273 10816370 2189980..2190330 1 NC_015672.1 PFAM: Bacterial regulatory protein, arsR family; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; InterPro IPR013216; KEGG: chu:CHU_1514 arsenite S-adenosylmethyltransferase; PFAM: Methyltransferase type 11; SPTR: Protein containing Methyltransferase type 11 domain; ArsR family transcriptional regulator 2190330 10816370 Flexsi_2044 Flexistipes sinusarabici DSM 4947 ArsR family transcriptional regulator YP_004604240.1 2189980 D 717231 CDS YP_004604241.1 336324274 10816371 2190315..2191076 1 NC_015672.1 PFAM: Methyltransferase domain; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; type 11 methyltransferase 2191076 10816371 Flexsi_2045 Flexistipes sinusarabici DSM 4947 type 11 methyltransferase YP_004604241.1 2190315 D 717231 CDS YP_004604242.1 336324275 10816372 complement(2191414..2192781) 1 NC_015672.1 PFAM: Transposase domain (DUF772); COGs: COG0398 conserved hypothetical protein; InterPro IPR015414; KEGG: cni:Calni_0116 SNARE associated golgi protein-related protein; PFAM: SNARE associated Golgi protein; SPTR: SNARE associated Golgi protein-related protein; transposase IS4 family protein 2192781 10816372 Flexsi_2046 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604242.1 2191414 R 717231 CDS YP_004604243.1 336324276 10816373 complement(2193016..2193711) 1 NC_015672.1 PFAM: SNARE associated Golgi protein; COGs: COG1249 Pyruvate/2-oxoglutarate dehydrogenase complex dihydrolipoamide dehydrogenase (E3); InterPro IPR013027:IPR004099; KEGG: dap:Dacet_1398 pyridine nucleotide-disulfide oxidoreductase dimerization region; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation; PRIAM: Dihydrolipoyl dehydrogenase; SPTR: Pyridine nucleotide-disulfide oxidoreductase dimerization region; hypothetical protein 2193711 10816373 Flexsi_2047 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604243.1 2193016 R 717231 CDS YP_004604244.1 336324277 10816374 complement(2193824..2195230) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain; COGs: COG3222 conserved hypothetical protein; InterPro IPR018641; KEGG: gfo:GFO_3609 hypothetical protein; PFAM: Protein of unknown function DUF2064; SPTR: Putative uncharacterized protein; dihydrolipoyl dehydrogenase 2195230 10816374 Flexsi_2048 Flexistipes sinusarabici DSM 4947 dihydrolipoyl dehydrogenase YP_004604244.1 2193824 R 717231 CDS YP_004604245.1 336324278 10816375 complement(2195217..2195867) 1 NC_015672.1 PFAM: Uncharacterized protein conserved in bacteria (DUF2064); COGs: COG2227 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1 4-benzoquinol methylase; InterPro IPR013216; KEGG: noc:Noc_0586 UbiE/COQ5 methyltransferase; PFAM: Methyltransferase type 11; PRIAM: Arsenite methyltransferase; SPTR: UbiE/COQ5 methyltransferase; manually curated; hypothetical protein 2195867 10816375 Flexsi_2049 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604245.1 2195217 R 717231 CDS YP_004604246.1 336324279 10816376 complement(2195855..2196913) 1 NC_015672.1 PFAM: Methyltransferase domain; manually curated; arsenite methyltransferase 2196913 10816376 Flexsi_2050 Flexistipes sinusarabici DSM 4947 arsenite methyltransferase YP_004604246.1 2195855 R 717231 CDS YP_004604247.1 336324280 10816378 complement(2197833..2198528) 1 NC_015672.1 PFAM: Glycosyl transferase family 2; InterPro IPR010181; KEGG: dap:Dacet_1415 C_GCAxxG_C_C family protein; PFAM: CGCAxxGCC motif; SPTR: C_GCAxxG_C_C family protein; TIGRFAM: CGCAxxGCC motif; family 2 glycosyl transferase 2198528 10816378 Flexsi_2052 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004604247.1 2197833 R 717231 CDS YP_004604248.1 336324281 10816379 2198586..2199029 1 NC_015672.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; COGs: COG3829 Transcriptional regulator containing PAS AAA-type ATPase and DNA-binding domains; InterPro IPR000014:IPR003593:IPR013767:IPR002078; KEGG: cni:Calni_1353 sigma54 specific transcriptional regulator; PFAM: RNA polymerase sigma factor 54, interaction; PAS fold; SMART: ATPase, AAA+ type, core; PAS; SPTR: Putative sigma54 specific transcriptional regulator; TIGRFAM: PAS; C_GCAxxG_C_C family protein 2199029 10816379 Flexsi_2053 Flexistipes sinusarabici DSM 4947 C_GCAxxG_C_C family protein YP_004604248.1 2198586 D 717231 CDS YP_004604249.1 336324282 10816380 2199564..2200886 1 NC_015672.1 PFAM: Sigma-54 interaction domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG4663 TRAP-type mannitol/chloroaromatic compound transport system periplasmic component; InterPro IPR018389; KEGG: cni:Calni_1350 extracellular solute-binding protein, family 7; PFAM: Extracellular solute-binding protein, family 7, bacteria; SPTR: Extracellular solute-binding protein, family 7; putative sigma-54 specific transcriptional regulator 2200886 10816380 Flexsi_2054 Flexistipes sinusarabici DSM 4947 putative sigma-54 specific transcriptional regulator YP_004604249.1 2199564 D 717231 CDS YP_004604250.1 336324283 10816381 2201108..2202184 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein, family 7; COGs: COG4665 TRAP-type mannitol/chloroaromatic compound transport system small permease component; InterPro IPR007387; KEGG: cni:Calni_1351 tripartite ATP-independent periplasmic transporter DctQ component; PFAM: Tripartite ATP-independent periplasmic transporter, DctQ component; SPTR: Tripartite ATP-independent periplasmic transporter DctQ component; family 7 extracellular solute-binding protein 2202184 10816381 Flexsi_2055 Flexistipes sinusarabici DSM 4947 family 7 extracellular solute-binding protein YP_004604250.1 2201108 D 717231 CDS YP_004604251.1 336324284 10816382 2202250..2202759 1 NC_015672.1 PFAM: Tripartite ATP-independent periplasmic transporters, DctQ component; COGs: COG4664 TRAP-type mannitol/chloroaromatic compound transport system large permease component; InterPro IPR004681:IPR010656; KEGG: cni:Calni_1352 trap dicarboxylate transporter, DctM subunit; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP dicarboxylate transporter, DctM subunit; TIGRFAM: TRAP dicarboxylate transporter, DctM subunit; tripartite AtP-independent periplasmic transporter subunit DctQ 2202759 10816382 Flexsi_2056 Flexistipes sinusarabici DSM 4947 tripartite AtP-independent periplasmic transporter subunit DctQ YP_004604251.1 2202250 D 717231 CDS YP_004604252.1 336324285 10816383 2202749..2204071 1 NC_015672.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, DctM subunit; COGs: COG0183 Acetyl-CoA acetyltransferase; InterPro IPR002155; KEGG: cni:Calni_1354 acetyl-CoA acetyltransferase; PRIAM: Acetyl-CoA C-acetyltransferase; SPTR: Acetyl-CoA acetyltransferase; TIGRFAM: Thiolase; TRAP dicarboxylate transporter subunit DctM 2204071 10816383 Flexsi_2057 Flexistipes sinusarabici DSM 4947 TRAP dicarboxylate transporter subunit DctM YP_004604252.1 2202749 D 717231 CDS YP_004604253.1 336324286 10816384 2204087..2205262 1 NC_015672.1 PFAM: Thiolase, C-terminal domain; Thiolase, N-terminal domain; TIGRFAM: acetyl-CoA acetyltransferases; COGs: COG2057 Acyl CoA:acetate/3-ketoacid CoA transferase beta subunit; InterPro IPR012792:IPR012791:IPR004165; KEGG: cni:Calni_1355 3-oxoacid CoA-transferase, B subunit; PFAM: Coenzyme A transferase; PRIAM: 3-oxoacid CoA-transferase; SPTR: 3-oxoacid CoA-transferase, B subunit; TIGRFAM: 3-oxoacid CoA-transferase, subunit B; 3-oxoacid CoA-transferase, subunit A; acetyl-CoA acetyltransferase 2205262 10816384 Flexsi_2058 Flexistipes sinusarabici DSM 4947 acetyl-CoA acetyltransferase YP_004604253.1 2204087 D 717231 CDS YP_004604254.1 336324287 10816385 2205283..2206650 1 NC_015672.1 PFAM: Coenzyme A transferase; TIGRFAM: 3-oxoacid CoA-transferase, B subunit; 3-oxoacid CoA-transferase, A subunit; COGs: COG1028 Dehydrogenase with different specificities (related to short-chain alcohol dehydrogenase); InterPro IPR011294:IPR002198; KEGG: cni:Calni_1356 3-hydroxybutyrate dehydrogenase; PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: 3-hydroxybutyrate dehydrogenase; SPTR: 3-hydroxybutyrate dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; 3-oxoacid CoA-transferase subunit B 2206650 10816385 Flexsi_2059 Flexistipes sinusarabici DSM 4947 3-oxoacid CoA-transferase subunit B YP_004604254.1 2205283 D 717231 CDS YP_004604255.1 336324288 10816386 2206653..2207411 1 NC_015672.1 PFAM: short chain dehydrogenase; TIGRFAM: 3-hydroxybutyrate dehydrogenase; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR001450; KEGG: dap:Dacet_0227 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; 3-hydroxybutyrate dehydrogenase 2207411 10816386 Flexsi_2060 Flexistipes sinusarabici DSM 4947 3-hydroxybutyrate dehydrogenase YP_004604255.1 2206653 D 717231 CDS YP_004604256.1 336324289 10816387 complement(2207654..2208937) 1 NC_015672.1 PFAM: 4Fe-4S binding domain; COGs: COG0399 pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; InterPro IPR000653; KEGG: cni:Calni_0511 DegT/DnrJ/eryc1/StrS aminotransferase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase; PRIAM: Glutamine--scyllo-inositol transaminase; SPTR: DegT/DnrJ/EryC1/StrS aminotransferase; 4Fe-4S ferredoxin 2208937 10816387 Flexsi_2061 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004604256.1 2207654 R 717231 CDS YP_004604257.1 336324290 10816388 2209137..2210234 1 NC_015672.1 PFAM: DegT/DnrJ/EryC1/StrS aminotransferase family; COGs: COG2121 conserved hypothetical protein; InterPro IPR007172; KEGG: ddf:DEFDS_0135 hypothetical protein; PFAM: Protein of unknown function DUF374; SPTR: Putative uncharacterized protein; glutamine--scyllo-inositol transaminase 2210234 10816388 Flexsi_2062 Flexistipes sinusarabici DSM 4947 glutamine--scyllo-inositol transaminase YP_004604257.1 2209137 D 717231 CDS YP_004604258.1 336324291 10816389 2210237..2210869 1 NC_015672.1 PFAM: Domain of unknown function (DUF374); COGs: COG1519 3-deoxy-D-manno-octulosonic-acid transferase; InterPro IPR007507; KEGG: cni:Calni_0509 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; PFAM: Three-deoxy-D-manno-octulosonic-acid transferase, N-terminal; SPTR: Three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein; hypothetical protein 2210869 10816389 Flexsi_2063 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604258.1 2210237 D 717231 CDS YP_004604259.1 336324292 10816390 2210844..2212091 1 NC_015672.1 PFAM: 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); COGs: COG1560 Lauroyl/myristoyl acyltransferase; InterPro IPR004960; KEGG: ddf:DEFDS_0137 lipid A biosynthesis lauroyl acyltransferase; PFAM: Bacterial lipid A biosynthesis acyltransferase; SPTR: Lipid A biosynthesis lauroyl acyltransferase; three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein 2212091 10816390 Flexsi_2064 Flexistipes sinusarabici DSM 4947 three-deoxy-D-manno-octulosonic-acid transferase domain-containing protein YP_004604259.1 2210844 D 717231 CDS YP_004604260.1 336324293 10816391 2212063..2212950 1 NC_015672.1 PFAM: Bacterial lipid A biosynthesis acyltransferase; COGs: COG0241 Histidinol phosphatase and related phosphatase; InterPro IPR006543:IPR006549:IPR005834; KEGG: cni:Calni_0507 histidinol-phosphate phosphatase family protein; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Histidinol-phosphate phosphatase family protein; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; Histidinol-phosphate phosphatase; lipid A biosynthesis acyltransferase 2212950 10816391 Flexsi_2065 Flexistipes sinusarabici DSM 4947 lipid A biosynthesis acyltransferase YP_004604260.1 2212063 D 717231 CDS YP_004604261.1 336324294 10816392 2212916..2213509 1 NC_015672.1 PFAM: Polynucleotide kinase 3 phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIIA; D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family domain; COGs: COG0078 Ornithine carbamoyltransferase; HAMAP: Ornithine carbamoyltransferase; InterPro IPR002292:IPR006132:IPR006131; KEGG: ddf:DEFDS_1628 ornithine carbamoyltransferase; PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding; Aspartate/ornithine carbamoyltransferase, Asp/Orn-binding region; PRIAM: Ornithine carbamoyltransferase; SPTR: Ornithine carbamoyltransferase; TIGRFAM: Ornithine carbamoyltransferase; HAD-superfamily hydrolase 2213509 10816392 Flexsi_2066 Flexistipes sinusarabici DSM 4947 HAD-superfamily hydrolase YP_004604261.1 2212916 D 717231 CDS YP_004604262.1 336324295 10816393 complement(2213506..2214420) 1 NC_015672.1 PFAM: Aspartate/ornithine carbamoyltransferase, carbamoyl-P binding domain; Aspartate/ornithine carbamoyltransferase, Asp/Orn binding domain; TIGRFAM: ornithine carbamoyltransferase; COGs: COG4992 Ornithine/acetylornithine aminotransferase; HAMAP: Acetylornithine/succinyldiaminopimelate aminotransferase; InterPro IPR004636:IPR005814; KEGG: ddf:DEFDS_1629 acetylornithine transaminase; PFAM: Aminotransferase class-III; PRIAM: Acetylornithine transaminase; SPTR: Acetylornithine transaminase; TIGRFAM: Acetylornithine/succinylornithine aminotransferase; ornithine carbamoyltransferase 2214420 10816393 Flexsi_2067 Flexistipes sinusarabici DSM 4947 ornithine carbamoyltransferase YP_004604262.1 2213506 R 717231 CDS YP_004604263.1 336324296 10816394 complement(2214421..2215587) 1 NC_015672.1 PFAM: Aminotransferase class-III; TIGRFAM: acetylornithine and succinylornithine aminotransferases; InterPro IPR001450; KEGG: cni:Calni_1000 hypothetical protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: Putative uncharacterized protein; acetylornithine/succinyldiaminopimelate aminotransferase 2215587 10816394 Flexsi_2068 Flexistipes sinusarabici DSM 4947 acetylornithine/succinyldiaminopimelate aminotransferase YP_004604263.1 2214421 R 717231 CDS YP_004604264.1 336324297 10816395 2215683..2216981 1 NC_015672.1 PFAM: 4Fe-4S binding domain; KEGG: cni:Calni_1001 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin 2216981 10816395 Flexsi_2069 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004604264.1 2215683 D 717231 CDS YP_004604265.1 336324298 10816396 2216978..2217394 1 NC_015672.1 COGs: COG2078 conserved hypothetical protein; HAMAP: AMMECR1-domain protein; InterPro IPR002733; KEGG: ddf:DEFDS_0690 hypothetical protein; PFAM: AMMECR1; SPTR: Putative uncharacterized protein; TIGRFAM: AMMECR1; hypothetical protein 2217394 10816396 Flexsi_2070 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604265.1 2216978 D 717231 CDS YP_004604266.1 336324299 10816397 complement(2217416..2217982) 1 NC_015672.1 PFAM: AMMECR1; TIGRFAM: uncharacterized protein, PH0010 family; KEGG: dps:DP2152 hypothetical protein; SPTR: Putative uncharacterized protein; AMMECR1-domain-containing protein 2217982 10816397 Flexsi_2071 Flexistipes sinusarabici DSM 4947 AMMECR1-domain-containing protein YP_004604266.1 2217416 R 717231 CDS YP_004604267.1 336324300 10816398 complement(2218538..2218852) 1 NC_015672.1 PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG0225 Peptide methionine sulfoxide reductase; HAMAP: Peptide methionine sulfoxide reductase msrB; Peptide methionine sulphoxide reductase MsrA; InterPro IPR002569:IPR002579; KEGG: dat:HRM2_08740 MsrAB; PFAM: Peptide methionine sulphoxide reductase MsrA; Methionine sulphoxide reductase B; PRIAM: Peptide-methionine (S)-S-oxide reductase., Peptide-methionine (R)-S-oxide reductase; SPTR: MsrAB; TIGRFAM: Methionine sulphoxide reductase B; Peptide methionine sulphoxide reductase MsrA; manually curated; hypothetical protein 2218852 10816398 Flexsi_2072 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604267.1 2218538 R 717231 CDS YP_004604268.1 336324301 10816399 complement(2218883..2219893) 1 NC_015672.1 PFAM: SelR domain; Peptide methionine sulfoxide reductase; TIGRFAM: methionine-S-sulfoxide reductase; methionine-R-sulfoxide reductase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; peptide methionine sulfoxide reductase msrB 2219893 10816399 Flexsi_2073 Flexistipes sinusarabici DSM 4947 peptide methionine sulfoxide reductase msrB YP_004604268.1 2218883 R 717231 CDS YP_004604269.1 336324302 10816400 complement(2220091..2221410) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 2221410 10816400 Flexsi_2074 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604269.1 2220091 R 717231 CDS YP_004604270.1 336324303 10816402 complement(2222440..2222682) 1 NC_015672.1 COGs: COG0693 Putative intracellular protease/amidase; InterPro IPR006286:IPR002818; KEGG: cni:Calni_0548 intracellular protease, PfpI family; PFAM: ThiJ/PfpI; SPTR: Intracellular protease, PfpI family; TIGRFAM: Peptidase C56, PfpI; hypothetical protein 2222682 10816402 Flexsi_2076 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604270.1 2222440 R 717231 CDS YP_004604271.1 336324304 10816403 complement(2222841..2223428) 1 NC_015672.1 PFAM: DJ-1/PfpI family; TIGRFAM: intracellular protease, PfpI family; InterPro IPR002645; KEGG: dap:Dacet_2858 anti-sigma-factor antagonist; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: Anti-sigma factor antagonist; Pfpi family intracellular protease 2223428 10816403 Flexsi_2077 Flexistipes sinusarabici DSM 4947 Pfpi family intracellular protease YP_004604271.1 2222841 R 717231 CDS YP_004604272.1 336324305 10816404 2224310..2224606 1 NC_015672.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; InterPro IPR002645; KEGG: cni:Calni_0942 pbs lyase heat domain protein repeat-containing protein; PFAM: Sulphate transporter/antisigma-factor antagonist STAS; SPTR: PBS lyase HEAT domain protein repeat-containing protein; sulfate transporter/antisigma-factor antagonist STAS 2224606 10816404 Flexsi_2078 Flexistipes sinusarabici DSM 4947 sulfate transporter/antisigma-factor antagonist STAS YP_004604272.1 2224310 D 717231 CDS YP_004604273.1 336324306 10816405 2224610..2226031 1 NC_015672.1 PFAM: STAS domain; TIGRFAM: anti-anti-sigma factor; COGs: COG1220 ATP-dependent protease HslVU (ClpYQ) ATPase subunit; HAMAP: ATP-dependent hsl protease ATP-binding subunit hslU; InterPro IPR004491:IPR003593:IPR013093; KEGG: ddf:DEFDS_2156 ATP-dependent protease HslVU, ATPase subunit HslU; PFAM: ATPase associated with various cellular activities, AAA-2; SMART: ATPase, AAA+ type, core; SPTR: ATP-dependent protease ATPase subunit HslU; TIGRFAM: Heat shock protein HslU; sulfate transporter/antisigma-factor antagonist STAS 2226031 10816405 Flexsi_2079 Flexistipes sinusarabici DSM 4947 sulfate transporter/antisigma-factor antagonist STAS YP_004604273.1 2224610 D 717231 CDS YP_004604274.1 336324307 10816406 complement(2226221..2227543) 1 NC_015672.1 PFAM: AAA domain (Cdc48 subfamily); C-terminal, D2-small domain, of ClpB protein; ATPase family associated with various cellular activities (AAA); TIGRFAM: ATP-dependent protease HslVU, ATPase subunit; COGs: COG5405 ATP-dependent protease HslVU (ClpYQ) peptidase subunit; HAMAP: ATP-dependent protease hslV; InterPro IPR001353; KEGG: ddf:DEFDS_2155 ATP-dependent protease HslVU, peptidase subunit HslV; PFAM: Proteasome, subunit alpha/beta; SPTR: ATP-dependent protease subunit HslV; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; ATP-dependent hsl protease ATP-binding subunit hslU 2227543 10816406 Flexsi_2080 Flexistipes sinusarabici DSM 4947 ATP-dependent hsl protease ATP-binding subunit hslU YP_004604274.1 2226221 R 717231 CDS YP_004604275.1 336324308 10816407 complement(2227557..2228084) 1 NC_015672.1 PFAM: Proteasome subunit; TIGRFAM: ATP-dependent protease HslVU, peptidase subunit; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; ATP-dependent protease hslV 2228084 10816407 Flexsi_2081 Flexistipes sinusarabici DSM 4947 ATP-dependent protease hslV YP_004604275.1 2227557 R 717231 CDS YP_004604276.1 336324309 10816408 complement(2228361..2229680) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG1067 ATP-dependent protease; InterPro IPR008269; KEGG: rxy:Rxyl_1929 ATP-dependent protease; PFAM: Peptidase S16, lon C-terminal; SPTR: ATP-dependent protease, putative; transposase IS4 family protein 2229680 10816408 Flexsi_2082 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604276.1 2228361 R 717231 CDS YP_004604277.1 336324310 10816409 2230024..2232438 1 NC_015672.1 PFAM: Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: lon-related putative ATP-dependent protease; COGs: COG0326 Molecular chaperone HSP90 family; HAMAP: Chaperone protein htpG; InterPro IPR001404:IPR003594:IPR020576; KEGG: cni:Calni_0147 heat shock protein HSP90; PFAM: Heat shock protein Hsp90, C-terminal; ATP-binding region, ATPase-like; SPTR: Chaperone protein htpG; peptidase S16 lon domain-containing protein 2232438 10816409 Flexsi_2083 Flexistipes sinusarabici DSM 4947 peptidase S16 lon domain-containing protein YP_004604277.1 2230024 D 717231 CDS YP_004604278.1 336324311 10816410 complement(2232484..2234364) 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; Hsp90 protein; COGs: COG0482 tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase contains the PP-loop ATPase domain; HAMAP: tRNA-specific 2-thiouridylase; InterPro IPR004506:IPR018318; KEGG: ddf:DEFDS_1156 tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; PFAM: tRNA methyl transferase-like; SPTR: tRNA-specific 2-thiouridylase mnmA; TIGRFAM: tRNA-specific 2-thiouridylase; chaperone protein htpG 2234364 10816410 Flexsi_2084 Flexistipes sinusarabici DSM 4947 chaperone protein htpG YP_004604278.1 2232484 R 717231 CDS YP_004604279.1 336324312 10816411 complement(2234842..2235876) 1 NC_015672.1 PFAM: tRNA methyl transferase; TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; tRNA-specific 2-thiouridylase mnmA 2235876 10816411 Flexsi_2085 Flexistipes sinusarabici DSM 4947 tRNA-specific 2-thiouridylase mnmA YP_004604279.1 2234842 R 717231 CDS YP_004604280.1 336324313 10816412 complement(2236153..2237472) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0144 tRNA and rRNA cytosine-C5-methylase; InterPro IPR001678; KEGG: ddf:DEFDS_1153 hypothetical protein; PFAM: Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p; SPTR: Putative uncharacterized protein; transposase IS4 family protein 2237472 10816412 Flexsi_2086 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604280.1 2236153 R 717231 CDS YP_004604281.1 336324314 10816413 2237589..2238710 1 NC_015672.1 PFAM: NOL1/NOP2/sun family; InterPro IPR013216; KEGG: cni:Calni_1990 methyltransferase type 11; PFAM: Methyltransferase type 11; SPTR: Methyltransferase type 11; Fmu (Sun) domain-containing protein 2238710 10816413 Flexsi_2087 Flexistipes sinusarabici DSM 4947 Fmu (Sun) domain-containing protein YP_004604281.1 2237589 D 717231 CDS YP_004604282.1 336324315 10816414 complement(2238697..2239389) 1 NC_015672.1 PFAM: Methyltransferase domain; manually curated; type 11 methyltransferase 2239389 10816414 Flexsi_2088 Flexistipes sinusarabici DSM 4947 type 11 methyltransferase YP_004604282.1 2238697 R 717231 CDS YP_004604283.1 336324316 10816416 complement(2240438..2240698) 1 NC_015672.1 PFAM: General secretion pathway protein K; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat region; COGs: COG0846 NAD-dependent protein deacetylase SIR2 family; InterPro IPR003000; KEGG: ddf:DEFDS_1437 Sir2 family transcriptional regulator; PFAM: NAD-dependent histone deacetylase, silent information regulator Sir2; SPTR: Transcriptional regulator, Sir2 family; competence protein ComEA 2240698 10816416 Flexsi_2090 Flexistipes sinusarabici DSM 4947 competence protein ComEA YP_004604283.1 2240438 R 717231 CDS YP_004604284.1 336324317 10816417 2241055..2241885 1 NC_015672.1 PFAM: Sir2 family; KEGG: dap:Dacet_2751 hypothetical protein; SPTR: Putative uncharacterized protein; silent information regulator protein Sir2 2241885 10816417 Flexsi_2091 Flexistipes sinusarabici DSM 4947 silent information regulator protein Sir2 YP_004604284.1 2241055 D 717231 CDS YP_004604285.1 336324318 10816418 2241878..2242804 1 NC_015672.1 PFAM: Protein of unknown function (DUF2860); InterPro IPR013429; KEGG: ddf:DEFDS_1611 hypothetical protein; PFAM: Regulatory protein, FmdB, putative; SPTR: Putative uncharacterized protein; TIGRFAM: Regulatory protein, FmdB, putative; hypothetical protein 2242804 10816418 Flexsi_2092 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604285.1 2241878 D 717231 CDS YP_004604286.1 336324319 10816419 complement(2243405..2243689) 1 NC_015672.1 PFAM: Zinc ribbon domain; TIGRFAM: putative regulatory protein, FmdB family; COGs: COG2768 Uncharacterized Fe-S center protein; InterPro IPR001450; KEGG: toc:Toce_2222 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; FmdB family regulatory protein 2243689 10816419 Flexsi_2093 Flexistipes sinusarabici DSM 4947 FmdB family regulatory protein YP_004604286.1 2243405 R 717231 CDS YP_004604287.1 336324320 10816420 2244123..2245247 1 NC_015672.1 PFAM: 4Fe-4S binding domain; InterPro IPR010181; KEGG: mpd:MCP_2169 hypothetical protein; PFAM: CGCAxxGCC motif; SPTR: Putative uncharacterized protein; TIGRFAM: CGCAxxGCC motif; 4Fe-4S ferredoxin 2245247 10816420 Flexsi_2094 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004604287.1 2244123 D 717231 CDS YP_004604288.1 336324321 10816421 complement(2245255..2245704) 1 NC_015672.1 PFAM: Putative redox-active protein (C_GCAxxG_C_C); TIGRFAM: C_GCAxxG_C_C family probable redox protein; C_GCAxxG_C_C family protein 2245704 10816421 Flexsi_2095 Flexistipes sinusarabici DSM 4947 C_GCAxxG_C_C family protein YP_004604288.1 2245255 R 717231 CDS YP_004604289.1 336324322 10816427 complement(2251861..2252835) 1 NC_015672.1 PFAM: Fructose-bisphosphate aldolase class-II; TIGRFAM: ketose-bisphosphate aldolases; fructose-1,6-bisphosphate aldolase, class II, various bacterial and amitochondriate protist; COGs: COG0182 translation initiation factor 2B subunit eIF-2B alpha/beta/delta family; HAMAP: Methylthioribose-1-phosphate isomerase; InterPro IPR005251:IPR011559:IPR000649; KEGG: ddf:DEFDS_0061 translation initiation factor IF-2B; PFAM: Initiation factor 2B related; PRIAM: S-methyl-5-thioribose-1-phosphate isomerase; SPTR: Translation initiation factor IF-2B; TIGRFAM: Putative translation initiation factor, aIF-2BI/5-methylthioribose-1-phosphate isomerase; Initiation factor 2B alpha/beta/delta; fructose-1,6-bisphosphate aldolase 2252835 10816427 Flexsi_2096 Flexistipes sinusarabici DSM 4947 fructose-1,6-bisphosphate aldolase YP_004604289.1 2251861 R 717231 CDS YP_004604290.1 336324323 10816428 complement(2252838..2253818) 1 NC_015672.1 PFAM: Initiation factor 2 subunit family; TIGRFAM: eIF-2B alpha/beta/delta-related uncharacterized proteins; S-methyl-5-thioribose-1-phosphate isomerase; COGs: COG0655 Multimeric flavodoxin WrbA; InterPro IPR005025; KEGG: ddf:DEFDS_0060 hypothetical protein; PFAM: NADPH-dependent FMN reductase; SPTR: Putative uncharacterized protein; methylthioribose-1-phosphate isomerase 2253818 10816428 Flexsi_2097 Flexistipes sinusarabici DSM 4947 methylthioribose-1-phosphate isomerase YP_004604290.1 2252838 R 717231 CDS YP_004604291.1 336324324 10816429 complement(2253827..2254369) 1 NC_015672.1 PFAM: NADPH-dependent FMN reductase; COGs: COG0006 Xaa-Pro aminopeptidase; InterPro IPR000994; KEGG: cni:Calni_0431 peptidase M24; PFAM: Peptidase M24, structural domain; SPTR: Peptidase M24; NADPH-dependent FMN reductase 2254369 10816429 Flexsi_2098 Flexistipes sinusarabici DSM 4947 NADPH-dependent FMN reductase YP_004604291.1 2253827 R 717231 CDS YP_004604292.1 336324325 10816430 complement(2254386..2255579) 1 NC_015672.1 PFAM: Metallopeptidase family M24; Creatinase/Prolidase N-terminal domain; COGs: COG0568 DNA-directed RNA polymerase sigma subunit (sigma70/sigma32); InterProIPR014284:IPR009042:IPR007627:IPR007624:IPR 007630; KEGG: dap:Dacet_0446 RNA polymerase, sigma 70 subunit, RpoD subfamily; PFAM: RNA polymerase sigma-70 region 4; RNA polymerase sigma-70 region 3; RNA polymerase sigma-70 region 2; RNA polymerase sigma-70 region 1.2; SPTR: RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma-70; peptidase M24 2255579 10816430 Flexsi_2099 Flexistipes sinusarabici DSM 4947 peptidase M24 YP_004604292.1 2254386 R 717231 CDS YP_004604293.1 336324326 10816431 complement(2255576..2256508) 1 NC_015672.1 PFAM: Sigma-70, region 4; Sigma-70 region 3; Sigma-70 region 2; Sigma-70 factor, region 1.2; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; COGs: COG1611 Rossmann fold nucleotide-binding protein; InterPro IPR005268:IPR005269; KEGG: ddf:DEFDS_0259 hypothetical protein; PFAM: Conserved hypothetical protein CHP00730; SPTR: Putative uncharacterized protein; TIGRFAM: Conserved hypothetical protein CHP00725; RpoD subfamily RNA polymerase sigma-70 subunit 2256508 10816431 Flexsi_2100 Flexistipes sinusarabici DSM 4947 RpoD subfamily RNA polymerase sigma-70 subunit YP_004604293.1 2255576 R 717231 CDS YP_004604294.1 336324327 10816432 complement(2256505..2256963) 1 NC_015672.1 PFAM: Possible lysine decarboxylase; TIGRFAM: TIGR00725 family protein; COGs: COG1216 glycosyltransferase; InterPro IPR001173; KEGG: cni:Calni_0623 glycosyl transferase family 2; PFAM: Glycosyl transferase, family 2; SPTR: Glycosyl transferase family 2; hypothetical protein 2256963 10816432 Flexsi_2101 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604294.1 2256505 R 717231 CDS YP_004604295.1 336324328 10816433 complement(2257080..2257850) 1 NC_015672.1 PFAM: Glycosyl transferase family 2; COGs: COG1522 Transcriptional regulators; InterPro IPR019888:IPR019887; KEGG: dap:Dacet_2404 transcriptional regulator, AsnC family; PFAM: Transcription regulator, AsnC-type, C-terminal; SMART: Transcription regulator, AsnC-type; SPTR: Transcriptional regulator, AsnC family; family 2 glycosyl transferase 2257850 10816433 Flexsi_2102 Flexistipes sinusarabici DSM 4947 family 2 glycosyl transferase YP_004604295.1 2257080 R 717231 CDS YP_004604296.1 336324329 10816434 complement(2257859..2258314) 1 NC_015672.1 PFAM: AsnC family; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR003265:IPR003651; KEGG: cni:Calni_0621 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD domain; Endonuclease III-like, iron-sulphur cluster loop motif; PRIAM: DNA-(apurinic or apyrimidinic site) lyase; SMART: HhH-GPD domain; SPTR: DNA-(Apurinic or apyrimidinic site) lyase; AsnC family transcriptional regulator 2258314 10816434 Flexsi_2103 Flexistipes sinusarabici DSM 4947 AsnC family transcriptional regulator YP_004604296.1 2257859 R 717231 CDS YP_004604297.1 336324330 10816435 complement(2258295..2258978) 1 NC_015672.1 PFAM: HhH-GPD superfamily base excision DNA repair protein; Helix-hairpin-helix motif; TIGRFAM: endonuclease III; KEGG: ddf:DEFDS_1866 hypothetical protein; SPTR: Putative uncharacterized protein; DNA-(apurinic or apyrimidinic site) lyase 2258978 10816435 Flexsi_2104 Flexistipes sinusarabici DSM 4947 DNA-(apurinic or apyrimidinic site) lyase YP_004604297.1 2258295 R 717231 CDS YP_004604298.1 336324331 10816436 complement(2258984..2259229) 1 NC_015672.1 COGs: COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase; InterPro IPR000192; KEGG: ddf:DEFDS_2167 cysteine desulfurase; PFAM: Aminotransferase, class V/Cysteine desulfurase; PRIAM: Cysteine desulfurase; SPTR: Cysteine desulfurase; hypothetical protein 2259229 10816436 Flexsi_2105 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604298.1 2258984 R 717231 CDS YP_004604299.1 336324332 10816437 complement(2259245..2260405) 1 NC_015672.1 PFAM: Aminotransferase class-V; TIGRFAM: cysteine desulfurase NifS; COGs: COG1959 transcriptional regulator protein; InterPro IPR000944; KEGG: cni:Calni_0618 transcriptional regulator, badm/rrf2 family; PFAM: Transcriptional regulator, Rrf2; SPTR: Transcriptional regulator, BadM/Rrf2 family; TIGRFAM: Transcriptional regulator, Rrf2; cysteine desulfurase 2260405 10816437 Flexsi_2106 Flexistipes sinusarabici DSM 4947 cysteine desulfurase YP_004604299.1 2259245 R 717231 CDS YP_004604300.1 336324333 10816438 complement(2260412..2260816) 1 NC_015672.1 PFAM: Transcriptional regulator; TIGRFAM: Rrf2 family protein; COGs: COG1045 Serine acetyltransferase; InterPro IPR005881:IPR001451; KEGG: ddf:DEFDS_2169 serine O-acetyltransferase; PRIAM: Serine O-acetyltransferase; SPTR: Serine O-acetyltransferase; TIGRFAM: Serine O-acetyltransferase; BadM/Rrf2 family transcriptional regulator 2260816 10816438 Flexsi_2107 Flexistipes sinusarabici DSM 4947 BadM/Rrf2 family transcriptional regulator YP_004604300.1 2260412 R 717231 CDS YP_004604301.1 336324334 10816439 complement(2260800..2261462) 1 NC_015672.1 PFAM: Serine acetyltransferase, N-terminal; TIGRFAM: serine O-acetyltransferase; InterPro IPR001450; KEGG: ddf:DEFDS_2170 4Fe-4S ferredoxin; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin; serine O-acetyltransferase 2261462 10816439 Flexsi_2108 Flexistipes sinusarabici DSM 4947 serine O-acetyltransferase YP_004604301.1 2260800 R 717231 CDS YP_004604302.1 336324335 10816440 complement(2261532..2261702) 1 NC_015672.1 PFAM: 4Fe-4S binding domain; KEGG: ddf:DEFDS_2171 hypothetical protein; SPTR: Putative uncharacterized protein; 4Fe-4S ferredoxin 2261702 10816440 Flexsi_2109 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004604302.1 2261532 R 717231 CDS YP_004604303.1 336324336 10816441 2261863..2262210 1 NC_015672.1 InterPro IPR000086; KEGG: ddf:DEFDS_2172 phosphohydrolase MutT/NUDIX family; PFAM: NUDIX hydrolase domain; SPTR: Phosphohydrolase, MutT/NUDIX family; hypothetical protein 2262210 10816441 Flexsi_2110 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604303.1 2261863 D 717231 CDS YP_004604304.1 336324337 10816442 2262210..2262749 1 NC_015672.1 PFAM: NUDIX domain; COGs: COG2021 Homoserine acetyltransferase; HAMAP: Homoserine O-acetyltransferase; InterPro IPR006296:IPR000073; KEGG: ddf:DEFDS_1867 homoserine O-acetyltransferase; PFAM: Alpha/beta hydrolase fold-1; PRIAM: Homoserine O-acetyltransferase; SPTR: Homoserine O-acetyltransferase; TIGRFAM: Homoserine O-acetyltransferase; NUDIX hydrolase 2262749 10816442 Flexsi_2111 Flexistipes sinusarabici DSM 4947 NUDIX hydrolase YP_004604304.1 2262210 D 717231 CDS YP_004604305.1 336324338 10816443 2263078..2264190 1 NC_015672.1 PFAM: alpha/beta hydrolase fold; TIGRFAM: homoserine O-acetyltransferase; InterPro IPR013216; KEGG: ddf:DEFDS_1868 methyltransferase UbiE/COQ5 family; PFAM: Methyltransferase type 11; SPTR: Methyltransferase, UbiE/COQ5 family; homoserine O-acetyltransferase 2264190 10816443 Flexsi_2112 Flexistipes sinusarabici DSM 4947 homoserine O-acetyltransferase YP_004604305.1 2263078 D 717231 CDS YP_004604306.1 336324339 10816444 2264203..2264916 1 NC_015672.1 PFAM: Methyltransferase domain; COGs: COG4619 ABC-type uncharacterized transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_1869 ABC transporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Xenobiotic-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: ABC transporter, ATP-binding protein; type 11 methyltransferase 2264916 10816444 Flexsi_2113 Flexistipes sinusarabici DSM 4947 type 11 methyltransferase YP_004604306.1 2264203 D 717231 CDS YP_004604307.1 336324340 10816445 2264913..2265602 1 NC_015672.1 PFAM: ABC transporter; COGs: COG0390 ABC-type uncharacterized transport system permease component; InterPro IPR005226; KEGG: ddf:DEFDS_1870 ABC transporter permease; PFAM: Conserved hypothetical protein CHP00245; SPTR: ABC transporter, permease; TIGRFAM: Conserved hypothetical protein CHP00245; xenobiotic-transporting ATPase 2265602 10816445 Flexsi_2114 Flexistipes sinusarabici DSM 4947 xenobiotic-transporting ATPase YP_004604307.1 2264913 D 717231 CDS YP_004604308.1 336324341 10816446 2265603..2266394 1 NC_015672.1 PFAM: Uncharacterised protein family (UPF0014); TIGRFAM: TIGR00245 family protein; COGs: COG0038 Chloride channel protein EriC; InterPro IPR001807:IPR000644; KEGG: ddf:DEFDS_1871 chloride channel protein, CIC family; PFAM: Chloride channel, voltage gated; Cystathionine beta-synthase, core; SPTR: Chloride channel protein, CIC family; hypothetical protein 2266394 10816446 Flexsi_2115 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604308.1 2265603 D 717231 CDS YP_004604309.1 336324342 10816447 2266387..2268174 1 NC_015672.1 PFAM: CBS domain; Voltage gated chloride channel; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; Cl- channel voltage-gated family protein 2268174 10816447 Flexsi_2116 Flexistipes sinusarabici DSM 4947 Cl- channel voltage-gated family protein YP_004604309.1 2266387 D 717231 CDS YP_004604310.1 336324343 10816448 complement(2268452..2269771) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0628 permease; InterPro IPR002549; KEGG: ddf:DEFDS_2005 transporter; PFAM: Uncharacterised protein family UPF0118; SPTR: Transporter; transposase IS4 family protein 2269771 10816448 Flexsi_2117 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604310.1 2268452 R 717231 CDS YP_004604311.1 336324344 10816449 complement(2270008..2271066) 1 NC_015672.1 PFAM: Domain of unknown function DUF20; COGs: COG0176 Transaldolase; HAMAP: transaldolase; InterPro IPR004731:IPR001585; KEGG: ddf:DEFDS_0352 transaldolase; PFAM: Transaldolase; SPTR: Probable transaldolase; TIGRFAM: Transaldolase C; hypothetical protein 2271066 10816449 Flexsi_2118 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604311.1 2270008 R 717231 CDS YP_004604312.1 336324345 10816450 complement(2271070..2271714) 1 NC_015672.1 PFAM: Transaldolase; TIGRFAM: fructose-6-phosphate aldolase, TalC/MipB family; InterPro IPR011017:IPR007029; KEGG: ddf:DEFDS_0351 hypothetical protein; PFAM: YHS; SMART: TRASH; SPTR: Putative uncharacterized protein; transaldolase 2271714 10816450 Flexsi_2119 Flexistipes sinusarabici DSM 4947 transaldolase YP_004604312.1 2271070 R 717231 CDS YP_004604313.1 336324346 10816451 complement(2271711..2271974) 1 NC_015672.1 PFAM: YHS domain; COGs: COG1847 RNA-binding protein; InterPro IPR001374; KEGG: ddf:DEFDS_0350 single-stranded nucleic acid binding protein; PFAM: Single-stranded nucleic acid binding R3H; SMART: Single-stranded nucleic acid binding R3H; SPTR: Single-stranded nucleic acid binding protein; YHS domain-containing protein 2271974 10816451 Flexsi_2120 Flexistipes sinusarabici DSM 4947 YHS domain-containing protein YP_004604313.1 2271711 R 717231 CDS YP_004604314.1 336324347 10816452 complement(2271964..2272620) 1 NC_015672.1 COGs: COG0706 Preprotein translocase subunit YidC; HAMAP: Membrane protein oxaA; InterPro IPR019998:IPR020001:IPR001708; KEGG: cni:Calni_1028 membrane protein insertase, YidC/oxa1 family; PFAM: Membrane insertion protein, OxaA/YidC; SPTR: Membrane protein oxaA; TIGRFAM: Membrane insertion protein, OxaA/YidC, core; Membrane insertion protein, OxoA/YidC, N-terminal; single-stranded nucleic acid binding R3H domain-containing protein 2272620 10816452 Flexsi_2121 Flexistipes sinusarabici DSM 4947 single-stranded nucleic acid binding R3H domain-containing protein YP_004604314.1 2271964 R 717231 CDS YP_004604315.1 336324348 10816453 complement(2272631..2274181) 1 NC_015672.1 PFAM: 60Kd inner membrane protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family, C-terminal domain; membrane protein insertase, YidC/Oxa1 family, N-terminal domain; COGs: COG0759 conserved hypothetical protein; HAMAP: Protein of unknown function DUF37; InterPro IPR002696; KEGG: ddf:DEFDS_0348 hypothetical protein; PFAM: Protein of unknown function DUF37; SPTR: UPF0161 protein DEFDS_0348; TIGRFAM: Protein of unknown function DUF37; manually curated; membrane protein OxaA 2274181 10816453 Flexsi_2122 Flexistipes sinusarabici DSM 4947 membrane protein OxaA YP_004604315.1 2272631 R 717231 CDS YP_004604316.1 336324349 10816454 complement(2274204..2274401) 1 NC_015672.1 PFAM: Domain of unknown function DUF37; TIGRFAM: conserved hypothetical protein YidD; COGs: COG0594 RNase P protein component; HAMAP: Ribonuclease P; InterPro IPR000100; KEGG: ddf:DEFDS_0347 ribonuclease P protein component; PFAM: Ribonuclease P; SPTR: Ribonuclease P protein component; TIGRFAM: Ribonuclease P; hypothetical protein 2274401 10816454 Flexsi_2123 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604316.1 2274204 R 717231 CDS YP_004604317.1 336324350 10816455 complement(2274394..2274732) 1 NC_015672.1 PFAM: Ribonuclease P; TIGRFAM: ribonuclease P protein component, eubacterial; HAMAP: 50S ribosomal protein L34; InterPro IPR000271; KEGG: dap:Dacet_0033 50S ribosomal protein L34; PFAM: Ribosomal protein L34; SPTR: 50S ribosomal protein L34; TIGRFAM: Ribosomal protein L34; ribonuclease P protein component 2274732 10816455 Flexsi_2124 Flexistipes sinusarabici DSM 4947 ribonuclease P protein component YP_004604317.1 2274394 R 717231 CDS YP_004604318.1 336324351 10816456 complement(2274736..2274879) 1 NC_015672.1 PFAM: Ribosomal protein L34; TIGRFAM: ribosomal protein L34, bacterial type; 50S ribosomal protein L34 2274879 10816456 Flexsi_2125 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L34 YP_004604318.1 2274736 R 717231 CDS YP_004604319.1 336324352 10816458 2275667..2276701 1 NC_015672.1 PFAM: DNA methylase; InterPro IPR002789; KEGG: sea:SeAg_B4804 hypothetical protein; PFAM: Protein of unknown function DUF87; SPTR: Putative uncharacterized protein; DNA methylase N-4/N-6 domain-containing protein 2276701 10816458 Flexsi_2126 Flexistipes sinusarabici DSM 4947 DNA methylase N-4/N-6 domain-containing protein YP_004604319.1 2275667 D 717231 CDS YP_004604320.1 336324353 10816459 2276682..2278733 1 NC_015672.1 PFAM: Domain of unknown function DUF87; InterPro IPR018977; KEGG: mma:MM_0197 hypothetical protein; PFAM: NurA domain; SPTR: Conserved protein; hypothetical protein 2278733 10816459 Flexsi_2127 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604320.1 2276682 D 717231 CDS YP_004604321.1 336324354 10816460 2278738..2280096 1 NC_015672.1 PFAM: NurA domain; manually curated; NurA domain-containing protein 2280096 10816460 Flexsi_2128 Flexistipes sinusarabici DSM 4947 NurA domain-containing protein YP_004604321.1 2278738 D 717231 CDS YP_004604322.1 336324355 10816463 2281160..2282479 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: pgn:PGN_0575 transposase in ISPg1; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 2282479 10816463 Flexsi_2131 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604322.1 2281160 D 717231 CDS YP_004604323.1 336324356 10816464 complement(2282678..2283580) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0644 Dehydrogenase (flavoprotein); InterPro IPR011777:IPR006076; KEGG: pca:Pcar_2388 flavoprotein-containing dehydrogenase; PFAM: FAD dependent oxidoreductase; SPTR: Flavoprotein-containing dehydrogenase; TIGRFAM: Geranylgeranyl reductase, plant/prokaryotic; transposase IS4 family protein 2283580 10816464 Flexsi_2132 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604323.1 2282678 R 717231 CDS YP_004604324.1 336324357 10816465 complement(2283712..2284680) 1 NC_015672.1 PFAM: FAD binding domain; TIGRFAM: geranylgeranyl reductase family; manually curated; geranylgeranyl reductase 2284680 10816465 Flexsi_2133 Flexistipes sinusarabici DSM 4947 geranylgeranyl reductase YP_004604324.1 2283712 R 717231 CDS YP_004604325.1 336324358 10816471 complement(2286916..2288235) 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; HAMAP: Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807; KEGG: dap:Dacet_2797 imidazoleglycerol-phosphate dehydratase; PFAM: Imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase; transposase IS4 family protein 2288235 10816471 Flexsi_2135 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604325.1 2286916 R 717231 CDS YP_004604326.1 336324359 10816472 2288355..2288939 1 NC_015672.1 PFAM: Imidazoleglycerol-phosphate dehydratase; COGs: COG0118 Glutamine amidotransferase; HAMAP: Imidazole glycerol phosphate synthase, subunit H; InterPro IPR010139:IPR000991; KEGG: cni:Calni_1940 imidazole glycerol phosphate synthase subunit HisH; PFAM: Glutamine amidotransferase class-I, C-terminal; SPTR: Imidazole glycerol phosphate synthase subunit hisH; TIGRFAM: Imidazole glycerol phosphate synthase, subunit H; imidazoleglycerol-phosphate dehydratase 2288939 10816472 Flexsi_2136 Flexistipes sinusarabici DSM 4947 imidazoleglycerol-phosphate dehydratase YP_004604326.1 2288355 D 717231 CDS YP_004604327.1 336324360 10816473 2288944..2289558 1 NC_015672.1 PFAM: Glutamine amidotransferase class-I; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; COGs: COG0106 Phosphoribosylformimino-5-aminoimidazole carboxamide ribonucleotide (ProFAR) isomerase; HAMAP:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; InterPro IPR006063:IPR006062; KEGG: cni:Calni_1939 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino) imidazole-4-carboxamide isomerase; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR:1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; TIGRFAM: Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; imidazole glycerol phosphate synthase subunit hisH 2289558 10816473 Flexsi_2137 Flexistipes sinusarabici DSM 4947 imidazole glycerol phosphate synthase subunit hisH YP_004604327.1 2288944 D 717231 CDS YP_004604328.1 336324361 10816474 2289552..2290277 1 NC_015672.1 PFAM: Histidine biosynthesis protein; TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; COGs: COG1267 Phosphatidylglycerophosphatase A and related protein; InterPro IPR007686; KEGG: ddf:DEFDS_0041 phosphatidylglycerophosphatase; PFAM: Phosphatidylglycerophosphatase A; SPTR: Phosphatidylglycerophosphatase; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2290277 10816474 Flexsi_2138 Flexistipes sinusarabici DSM 4947 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_004604328.1 2289552 D 717231 CDS YP_004604329.1 336324362 10816475 2290270..2290713 1 NC_015672.1 PFAM: Phosphatidylglycerophosphatase A; COGs: COG1058 nucleotide-utilizing enzyme related to molybdopterin-biosynthesis enzyme MoeA; InterPro IPR008135:IPR008136:IPR001453; KEGG: cni:Calni_1937 competence/damage-inducible protein CinA; PFAM: CinA, C-terminal; Molybdopterin binding; SPTR: CinA-like protein; TIGRFAM: Competence-induced protein CinA; CinA, C-terminal; phosphatidylglycerophosphatase A 2290713 10816475 Flexsi_2139 Flexistipes sinusarabici DSM 4947 phosphatidylglycerophosphatase A YP_004604329.1 2290270 D 717231 CDS YP_004604330.1 336324363 10816476 2290710..2291936 1 NC_015672.1 PFAM: Probable molybdopterin binding domain; Competence-damaged protein; TIGRFAM: competence/damage-inducible protein CinA N-terminal domain; competence/damage-inducible protein CinA C-terminal domain; molybdenum cofactor synthesis domain; COGs: COG1514 2'-5' RNA ligase; InterPro IPR004175:IPR014051; KEGG: ddf:DEFDS_0039 2'-5' RNA ligase; PFAM: Phosphoesterase, HXTX; SPTR: 2'-5' RNA ligase; TIGRFAM: 2',5' RNA ligase; competence/damage-inducible protein CinA 2291936 10816476 Flexsi_2140 Flexistipes sinusarabici DSM 4947 competence/damage-inducible protein CinA YP_004604330.1 2290710 D 717231 CDS YP_004604331.1 336324364 10816477 2291933..2292475 1 NC_015672.1 PFAM: 2',5' RNA ligase family; TIGRFAM: 2'-5' RNA ligase; COGs: COG0468 RecA/RadA recombinase; HAMAP: DNA recombination and repair protein RecA; InterPro IPR013765:IPR003593; KEGG: ddf:DEFDS_0038 DNA recombination protein RecA; PFAM: DNA recombination and repair protein RecA; SMART: ATPase, AAA+ type, core; SPTR: Protein recA; TIGRFAM: DNA recombination and repair protein RecA; 2'-5' RNA ligase 2292475 10816477 Flexsi_2141 Flexistipes sinusarabici DSM 4947 2'-5' RNA ligase YP_004604331.1 2291933 D 717231 CDS YP_004604332.1 336324365 10816478 2292492..2293538 1 NC_015672.1 PFAM: recA bacterial DNA recombination protein; TIGRFAM: protein RecA; COGs: COG2805 Tfp pilus assembly protein pilus retraction ATPase PilT; InterPro IPR006321:IPR001482; KEGG: ddf:DEFDS_0037 twitching motility protein PilT; PFAM: Type II secretion system protein E; SPTR: Twitching motility protein PilT; TIGRFAM: Pilus retraction protein PilT; protein recA 2293538 10816478 Flexsi_2142 Flexistipes sinusarabici DSM 4947 protein recA YP_004604332.1 2292492 D 717231 CDS YP_004604333.1 336324366 10816479 2293531..2294652 1 NC_015672.1 PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT; COGs: COG2137 conserved hypothetical protein; KEGG: ddf:DEFDS_0036 regulatory protein RecX; SPTR: Regulatory protein recX; twitching motility protein 2294652 10816479 Flexsi_2143 Flexistipes sinusarabici DSM 4947 twitching motility protein YP_004604333.1 2293531 D 717231 CDS YP_004604334.1 336324367 10816480 2294633..2295145 1 NC_015672.1 PFAM: RecX family; COGs: COG0359 Ribosomal protein L9; HAMAP: Ribosomal protein L9, bacteria/chloroplast; InterPro IPR020594:IPR020070:IPR020069; KEGG: bts:Btus_3301 ribosomal protein L9; PFAM: Ribosomal protein L9, C-terminal; Ribosomal protein L9, N-terminal; SPTR: 50S ribosomal protein L9; TIGRFAM: Ribosomal protein L9, bacteria/chloroplast; hypothetical protein 2295145 10816480 Flexsi_2144 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604334.1 2294633 D 717231 CDS YP_004604335.1 336324368 10816481 2295126..2295572 1 NC_015672.1 PFAM: Ribosomal protein L9, N-terminal domain; Ribosomal protein L9, C-terminal domain; TIGRFAM: ribosomal protein L9; COGs: COG0305 Replicative DNA helicase; InterPro IPR007692:IPR003593:IPR007693:IPR007694; KEGG: ddf:DEFDS_0034 replicative DNA helicase DnaB; PFAM: DNA helicase, DnaB-like, C-terminal; DNA helicase, DnaB-like, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Replicative DNA helicase DnaB; TIGRFAM: DNA helicase, DnaB type; 50S ribosomal protein L9 2295572 10816481 Flexsi_2145 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L9 YP_004604335.1 2295126 D 717231 CDS YP_004604336.1 336324369 10816482 2295586..2296959 1 NC_015672.1 PFAM: DnaB-like helicase N terminal domain; DnaB-like helicase C terminal domain; TIGRFAM: replicative DNA helicase; COGs: COG0774 UDP-3-O-acyl-N-acetylglucosamine deacetylase; HAMAP: UDP-3-O-acyl N-acetylglucosamine deacetylase; InterPro IPR004463; KEGG: ddf:DEFDS_0033 UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; PFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; SPTR: UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase; TIGRFAM: UDP-3-O-acyl N-acetylglucosamine deacetylase; replicative DNA helicase 2296959 10816482 Flexsi_2146 Flexistipes sinusarabici DSM 4947 replicative DNA helicase YP_004604336.1 2295586 D 717231 CDS YP_004604337.1 336324370 10816483 2297260..2298171 1 NC_015672.1 PFAM: UDP-3-O-acyl N-acetylglycosamine deacetylase; TIGRFAM: UDP-3-0-acyl N-acetylglucosamine deacetylase; COGs: COG0501 Zn-dependent protease with chaperone function; InterPro IPR001915; KEGG: ddf:DEFDS_1961 peptidase M48 family; PFAM: Peptidase M48, Ste24p; PRIAM: Ste24 endopeptidase; SPTR: Peptidase, M48 family; UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase 2298171 10816483 Flexsi_2147 Flexistipes sinusarabici DSM 4947 UDP-3-O-(3-hydroxymyristoyl) N-acetylglucosamine deacetylase YP_004604337.1 2297260 D 717231 CDS YP_004604338.1 336324371 10816484 2298688..2299929 1 NC_015672.1 PFAM: Peptidase family M48; COGs: COG0442 Prolyl-tRNA synthetase; HAMAP: Prolyl-tRNA synthetase; InterPro IPR004500:IPR002314:IPR007214:IPR004154; KEGG: cni:Calni_0984 prolyl-tRNA synthetase; PFAM: Aminoacyl-tRNA synthetase, class II (G/ H/ P/ S), conserved region; YbaK/aminoacyl-tRNA synthetase associated region; Anticodon-binding; SPTR: Prolyl-tRNA synthetase; TIGRFAM: Prolyl-tRNA synthetase, class IIa, bacterial; Ste24 endopeptidase 2299929 10816484 Flexsi_2148 Flexistipes sinusarabici DSM 4947 Ste24 endopeptidase YP_004604338.1 2298688 D 717231 CDS YP_004604339.1 336324372 10816485 complement(2300090..2301811) 1 NC_015672.1 PFAM: Anticodon binding domain; YbaK / prolyl-tRNA synthetases associated domain; tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: prolyl-tRNA synthetase, family II; COGs: COG1032 Fe-S oxidoreductase; InterPro IPR006638:IPR007197; KEGG: ddf:DEFDS_1144 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; prolyl-tRNA synthetase 2301811 10816485 Flexsi_2149 Flexistipes sinusarabici DSM 4947 prolyl-tRNA synthetase YP_004604339.1 2300090 R 717231 CDS YP_004604340.1 336324373 10816486 2301942..2302826 1 NC_015672.1 PFAM: Radical SAM superfamily; COGs: COG0679 permease; InterPro IPR004776; KEGG: cni:Calni_0181 auxin efflux carrier; PFAM: Auxin efflux carrier; SPTR: Auxin Efflux Carrier; radical SAM protein 2302826 10816486 Flexsi_2150 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004604340.1 2301942 D 717231 CDS YP_004604341.1 336324374 10816487 complement(2303336..2304253) 1 NC_015672.1 PFAM: Membrane transport protein; COGs: COG2255 Holliday junction resolvasome helicase subunit; HAMAP: DNA helicase, Holliday junction RuvB type; InterProIPR004605:IPR003593:IPR008824:IPR003959:IPR 008823; KEGG: ddf:DEFDS_1809 Holliday junction DNA helicase RuvB; PFAM: DNA helicase, Holliday junction RuvB type, C-terminal; ATPase, AAA-type, core; DNA helicase, Holliday junction RuvB type, N-terminal; SMART: ATPase, AAA+ type, core; SPTR: Holliday junction ATP-dependent DNA helicase ruvB; TIGRFAM: DNA helicase, Holliday junction RuvB type; auxin efflux carrier 2304253 10816487 Flexsi_2151 Flexistipes sinusarabici DSM 4947 auxin efflux carrier YP_004604341.1 2303336 R 717231 CDS YP_004604342.1 336324375 10816488 2304603..2305730 1 NC_015672.1 PFAM: Holliday junction DNA helicase ruvB C-terminus; Holliday junction DNA helicase ruvB N-terminus; TIGRFAM: Holliday junction DNA helicase, RuvB subunit; COGs: COG1066 ATP-dependent serine protease; InterPro IPR004504:IPR003593; KEGG: cni:Calni_0998 DNA replication and repair protein RadA; SMART: ATPase, AAA+ type, core; SPTR: DNA repair protein radA; TIGRFAM: DNA repair protein RadA; Holliday junction ATP-dependent DNA helicase ruvB 2305730 10816488 Flexsi_2152 Flexistipes sinusarabici DSM 4947 Holliday junction ATP-dependent DNA helicase ruvB YP_004604342.1 2304603 D 717231 CDS YP_004604343.1 336324376 10816489 2305737..2307095 1 NC_015672.1 PFAM: KaiC; Lon protease (S16) C-terminal proteolytic domain; TIGRFAM: DNA repair protein RadA; COGs: COG0623 Enoyl-(acyl-carrier-protein); InterPro IPR002198; KEGG: ddf:DEFDS_1807 enoyl-[acyl-carrier protein] reductase (NADH); PFAM: Short-chain dehydrogenase/reductase SDR; PRIAM: Enoyl-[acyl-carrier-protein] reductase (NADH); SPTR: Enoyl-[acyl-carrier-protein] reductase [NADH]; DNA repair protein RadA 2307095 10816489 Flexsi_2153 Flexistipes sinusarabici DSM 4947 DNA repair protein RadA YP_004604343.1 2305737 D 717231 CDS YP_004604344.1 336324377 10816490 2307115..2307879 1 NC_015672.1 PFAM: short chain dehydrogenase; InterPro IPR002482:IPR018392; KEGG: ddf:DEFDS_0274 hypothetical protein; PFAM: Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding Lysin subgroup; SPTR: Putative uncharacterized protein; enoyl-(acyl carrier protein) reductase 2307879 10816490 Flexsi_2154 Flexistipes sinusarabici DSM 4947 enoyl-(acyl carrier protein) reductase YP_004604344.1 2307115 D 717231 CDS YP_004604345.1 336324378 10816491 complement(2307978..2308958) 1 NC_015672.1 PFAM: LysM domain; COGs: COG1729 conserved hypothetical protein; InterPro IPR014162; KEGG: ddf:DEFDS_0275 hypothetical protein; SPTR: Putative uncharacterized protein; TIGRFAM: Tol-Pal system, YbgF; peptidoglycan-binding lysin domain-containing protein 2308958 10816491 Flexsi_2155 Flexistipes sinusarabici DSM 4947 peptidoglycan-binding lysin domain-containing protein YP_004604345.1 2307978 R 717231 CDS YP_004604346.1 336324379 10816492 complement(2308962..2309738) 1 NC_015672.1 TIGRFAM: tol-pal system protein YbgF; COGs: COG1528 Ferritin-like protein; InterPro IPR008331; KEGG: ddf:DEFDS_0829 ferritin; PFAM: Ferritin/Dps protein; PRIAM: Ferroxidase; SPTR: Ferritin; tol-pal system protein YbgF 2309738 10816492 Flexsi_2156 Flexistipes sinusarabici DSM 4947 tol-pal system protein YbgF YP_004604346.1 2308962 R 717231 CDS YP_004604347.1 336324380 10816493 2310023..2310535 1 NC_015672.1 PFAM: Ferritin-like domain; KEGG: cni:Calni_1683 hypothetical protein; ferroxidase 2310535 10816493 Flexsi_2157 Flexistipes sinusarabici DSM 4947 ferroxidase YP_004604347.1 2310023 D 717231 CDS YP_004604348.1 336324381 10816494 complement(2310612..2310752) 1 NC_015672.1 COGs: COG0755 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR002541; KEGG: ddf:DEFDS_0177 heme exporter membrane protein; PFAM: Cytochrome c assembly protein; SPTR: Heme exporter membrane protein; hypothetical protein 2310752 10816494 Flexsi_2158 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604348.1 2310612 R 717231 CDS YP_004604349.1 336324382 10816495 complement(2310749..2311420) 1 NC_015672.1 PFAM: Cytochrome C assembly protein; COGs: COG2386 ABC-type transport system involved in cytochrome c biogenesis permease component; InterPro IPR003544; KEGG: cni:Calni_1685 cytochrome c-type biogenesis protein CcmB; PFAM: Cytochrome c-type biogenesis protein CcmB; SPTR: Cytochrome c-type biogenesis protein CcmB; cytochrome c assembly protein 2311420 10816495 Flexsi_2159 Flexistipes sinusarabici DSM 4947 cytochrome c assembly protein YP_004604349.1 2310749 R 717231 CDS YP_004604350.1 336324383 10816496 complement(2311424..2312104) 1 NC_015672.1 PFAM: CcmB protein; TIGRFAM: heme exporter protein CcmB; COGs: COG1131 ABC-type multidrug transport system ATPase component; InterPro IPR003593:IPR003439; KEGG: ddf:DEFDS_0175 heme exporter ATP-binding protein; PFAM: ABC transporter-like; PRIAM: Polyamine-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Heme exporter ATP-binding protein; cytochrome c-type biogenesis protein CcmB 2312104 10816496 Flexsi_2160 Flexistipes sinusarabici DSM 4947 cytochrome c-type biogenesis protein CcmB YP_004604350.1 2311424 R 717231 CDS YP_004604351.1 336324384 10816497 complement(2312113..2312820) 1 NC_015672.1 PFAM: ABC transporter; COGs: COG1138 Cytochrome c biogenesis factor; InterPro IPR002541; KEGG: ddf:DEFDS_0174 cytochrome c-type biogenesis protein CcmF; PFAM: Cytochrome c assembly protein; SPTR: Cytochrome c-type biogenesis protein CcmF; polyamine-transporting ATPase 2312820 10816497 Flexsi_2161 Flexistipes sinusarabici DSM 4947 polyamine-transporting ATPase YP_004604351.1 2312113 R 717231 CDS YP_004604352.1 336324385 10816498 complement(2312801..2314780) 1 NC_015672.1 PFAM: Cytochrome C assembly protein; TIGRFAM: c-type cytochrome biogenesis protein CcmF; COGs: COG0612 Zn-dependent peptidase; InterPro IPR011765:IPR007863; KEGG: cni:Calni_0661 peptidase M16 domain protein; PFAM: Peptidase M16, C-terminal; Peptidase M16, N-terminal; SPTR: Peptidase M16 domain protein; cytochrome c assembly protein 2314780 10816498 Flexsi_2162 Flexistipes sinusarabici DSM 4947 cytochrome c assembly protein YP_004604352.1 2312801 R 717231 CDS YP_004604353.1 336324386 10816499 2315028..2316293 1 NC_015672.1 PFAM: Peptidase M16 inactive domain; Insulinase (Peptidase family M16); COGs: COG1188 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog); InterPro IPR002942; KEGG: dap:Dacet_0255 RNA-binding S4 domain protein; PFAM: RNA-binding S4; SMART: RNA-binding S4; SPTR: RNA-binding S4 domain protein; peptidase M16 domain-containing protein 2316293 10816499 Flexsi_2163 Flexistipes sinusarabici DSM 4947 peptidase M16 domain-containing protein YP_004604353.1 2315028 D 717231 CDS YP_004604354.1 336324387 10816500 complement(2316411..2316689) 1 NC_015672.1 PFAM: S4 domain; COGs: COG0351 Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase; InterPro IPR004399:IPR013749; KEGG: cni:Calni_0108 phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1; PRIAM: Phosphomethylpyrimidine kinase; SPTR: Phosphomethylpyrimidine kinase; TIGRFAM: Phosphomethylpyrimidine kinase type-2; RNA-binding S4 domain-containing protein 2316689 10816500 Flexsi_2164 Flexistipes sinusarabici DSM 4947 RNA-binding S4 domain-containing protein YP_004604354.1 2316411 R 717231 CDS YP_004604355.1 336324388 10816501 complement(2316679..2317488) 1 NC_015672.1 PFAM: Phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; COGs: COG0587 DNA polymerase III alpha subunit; InterProIPR004805:IPR003141:IPR004013:IPR011708:IPR 004365; KEGG: ddf:DEFDS_2002 DNA polymerase III subunit alpha; PFAM: Bacterial DNA polymerase III, alpha subunit; PHP, C-terminal; Nucleic acid binding, OB-fold, tRNA/helicase-type; PRIAM: DNA-directed DNA polymerase; SMART: Polymerase/histidinol phosphatase, N-terminal; SPTR: DNA polymerase III, alpha subunit; TIGRFAM: DNA polymerase III, alpha subunit; phosphomethylpyrimidine kinase 2317488 10816501 Flexsi_2165 Flexistipes sinusarabici DSM 4947 phosphomethylpyrimidine kinase YP_004604355.1 2316679 R 717231 CDS YP_004604356.1 336324389 10816502 complement(2317500..2320985) 1 NC_015672.1 PFAM: PHP domain; Bacterial DNA polymerase III alpha subunit; OB-fold nucleic acid binding domain; TIGRFAM: DNA-directed DNA polymerase III (polc); COGs: COG1763 Molybdopterin-guanine dinucleotide biosynthesis protein; InterPro IPR004435; KEGG: ddf:DEFDS_2001 molybdopterin-guanine dinucleotide biosynthesis protein B; PFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; SPTR: Molybdopterin-guanine dinucleotide biosynthesis protein B; TIGRFAM: Molybdopterin-guanine dinucleotide biosynthesis MobB region; DNA polymerase III subunit alpha 2320985 10816502 Flexsi_2166 Flexistipes sinusarabici DSM 4947 DNA polymerase III subunit alpha YP_004604356.1 2317500 R 717231 CDS YP_004604357.1 336324390 10816503 complement(2320995..2321618) 1 NC_015672.1 PFAM: Molybdopterin guanine dinucleotide synthesis protein B; TIGRFAM: molybdopterin-guanine dinucleotide biosynthesis protein MobB; COGs: COG0658 membrane metal-binding protein; InterPro IPR004477; KEGG: ddf:DEFDS_2000 hypothetical protein; PFAM: ComEC/Rec2-related protein; SPTR: Putative uncharacterized protein; TIGRFAM: ComEC/Rec2-related protein; molybdopterin-guanine dinucleotide biosynthesis protein B 2321618 10816503 Flexsi_2167 Flexistipes sinusarabici DSM 4947 molybdopterin-guanine dinucleotide biosynthesis protein B YP_004604357.1 2320995 R 717231 CDS YP_004604358.1 336324391 10816504 2321703..2323403 1 NC_015672.1 PFAM: Competence protein; TIGRFAM: ComEC/Rec2-related protein; COGs: COG0476 Dinucleotide-utilizing protein involved in molybdopterin and thiamine biosynthesis family 2; InterPro IPR012729:IPR000594; KEGG: ddf:DEFDS_1999 thiamine biosynthesis protein ThiF; PFAM: UBA/THIF-type NAD/FAD binding fold; SPTR: Thiamine biosynthesis protein ThiF; TIGRFAM: Thiamine biosynthesis protein ThiF; ComEC/Rec2-like protein 2323403 10816504 Flexsi_2168 Flexistipes sinusarabici DSM 4947 ComEC/Rec2-like protein YP_004604358.1 2321703 D 717231 CDS YP_004604359.1 336324392 10816505 2323396..2324199 1 NC_015672.1 PFAM: ThiF family; TIGRFAM: thiamine biosynthesis protein ThiF, family 2; InterPro IPR010035:IPR003749; KEGG: dsa:Desal_2647 thiamine biosynthesis protein ThiS; PFAM: ThiamineS; SPTR: Thiamine biosynthesis protein ThiS; TIGRFAM: ThiS, thiamine-biosynthesis; thiamine biosynthesis protein ThiF 2324199 10816505 Flexsi_2169 Flexistipes sinusarabici DSM 4947 thiamine biosynthesis protein ThiF YP_004604359.1 2323396 D 717231 CDS YP_004604360.1 336324393 10816506 2324196..2324396 1 NC_015672.1 PFAM: ThiS family; TIGRFAM: thiamine biosynthesis protein ThiS; thiamine biosynthesis protein ThiS 2324396 10816506 Flexsi_2170 Flexistipes sinusarabici DSM 4947 thiamine biosynthesis protein ThiS YP_004604360.1 2324196 D 717231 CDS YP_004604361.1 336324394 10816507 complement(2324402..2324845) 1 NC_015672.1 COGs: COG0608 Single-stranded DNA-specific exonuclease; InterPro IPR004610:IPR001667:IPR003156; KEGG: ddf:DEFDS_0047 single-strand DNA-specific exonuclease; PFAM: Phosphoesterase, RecJ-like; Phosphoesterase, DHHA1; SPTR: Single-strand DNA-specific exonuclease; TIGRFAM: Bacterial RecJ exonuclease; hypothetical protein 2324845 10816507 Flexsi_2171 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604361.1 2324402 R 717231 CDS YP_004604362.1 336324395 10816508 2325517..2327280 1 NC_015672.1 PFAM: DHH family; DHHA1 domain; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; COGs: COG0317 Guanosine polyphosphate pyrophosphohydrolase/synthetase; InterProIPR004811:IPR003607:IPR006674:IPR007685:IPR 004095:IPR002912; KEGG: ddf:DEFDS_0048 GTP pyrophosphokinase; PFAM: RelA/SpoT; Metal-dependent phosphohydrolase, HD region, subdomain; TGS; Amino acid-binding ACT; PRIAM: GTP diphosphokinase; SMART: Metal-dependent phosphohydrolase, HD region; SPTR: GTP pyrophosphokinase; TIGRFAM: RelA/SpoT protein; single-stranded-DNA-specific exonuclease RecJ 2327280 10816508 Flexsi_2172 Flexistipes sinusarabici DSM 4947 single-stranded-DNA-specific exonuclease RecJ YP_004604362.1 2325517 D 717231 CDS YP_004604363.1 336324396 10816509 2327277..2329409 1 NC_015672.1 PFAM: HD domain; ACT domain; Region found in RelA / SpoT proteins; TGS domain; TIGRFAM: (p)ppGpp synthetase, RelA/SpoT family; COGs: COG0227 Ribosomal protein L28; HAMAP: Ribosomal protein L28; InterPro IPR001383; KEGG: ddf:DEFDS_0316 50S ribosomal protein L28; PFAM: Ribosomal protein L28; SPTR: 50S ribosomal protein L28; TIGRFAM: Ribosomal protein L28; (p)ppGpp synthetase I SpoT/RelA 2329409 10816509 Flexsi_2173 Flexistipes sinusarabici DSM 4947 (p)ppGpp synthetase I SpoT/RelA YP_004604363.1 2327277 D 717231 CDS YP_004604364.1 336324397 10816510 complement(2329441..2329632) 1 NC_015672.1 PFAM: Ribosomal L28 family; TIGRFAM: ribosomal protein L28; InterPro IPR015077; KEGG: ddf:DEFDS_0803 hypothetical protein; PFAM: Domain of unknown function DUF1858; SPTR: Putative uncharacterized protein; 50S ribosomal protein L28 2329632 10816510 Flexsi_2174 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L28 YP_004604364.1 2329441 R 717231 CDS YP_004604365.1 336324398 10816511 2329731..2329928 1 NC_015672.1 PFAM: Domain of unknown function (DUF1858); TIGRFAM: hydrid cluster protein-associated redox disulfide domain; COGs: COG0220 S-adenosylmethionine-dependent methyltransferase; HAMAP: tRNA (guanine-N(7)-)-methyltransferase; InterPro IPR003358; KEGG: cni:Calni_0597 tRNA (guanine-n(7)-)-methyltransferase; PFAM: tRNA (guanine-N-7) methyltransferase; SPTR: tRNA (guanine-N(7)-)-methyltransferase; TIGRFAM: tRNA (guanine-N-7) methyltransferase; hypothetical protein 2329928 10816511 Flexsi_2175 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604365.1 2329731 D 717231 CDS YP_004604366.1 336324399 10816512 2329941..2330609 1 NC_015672.1 PFAM: Putative methyltransferase; TIGRFAM: tRNA (guanine-N(7)-)-methyltransferase; COGs: COG1030 Membrane-bound serine protease (ClpP class); InterPro IPR002810; KEGG: dap:Dacet_0511 hypothetical protein; PFAM: Nodulation efficiency, NfeD; SPTR: Putative uncharacterized protein; tRNA (guanine-N(7)-)-methyltransferase 2330609 10816512 Flexsi_2176 Flexistipes sinusarabici DSM 4947 tRNA (guanine-N(7)-)-methyltransferase YP_004604366.1 2329941 D 717231 CDS YP_004604367.1 336324400 10816513 2330614..2331888 1 NC_015672.1 PFAM: Clp protease; NfeD-like; KEGG: dap:Dacet_0510 hypothetical protein; SPTR: Putative uncharacterized protein; hypothetical protein 2331888 10816513 Flexsi_2177 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604367.1 2330614 D 717231 CDS YP_004604368.1 336324401 10816514 2331881..2332138 1 NC_015672.1 PFAM: Protein of unknown function (DUF493); COGs: COG0589 Universal stress protein UspA and related nucleotide-binding protein; InterPro IPR006016; KEGG: ddf:DEFDS_0203 universal stress protein; PFAM: UspA; SPTR: Universal stress protein; hypothetical protein 2332138 10816514 Flexsi_2178 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604368.1 2331881 D 717231 CDS YP_004604369.1 336324402 10816515 2332184..2332633 1 NC_015672.1 PFAM: Universal stress protein family; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853:IPR010656; KEGG: dap:Dacet_1218 TRAP transporter, 4TM/12TM fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; UspA domain-containing protein 2332633 10816515 Flexsi_2179 Flexistipes sinusarabici DSM 4947 UspA domain-containing protein YP_004604369.1 2332184 D 717231 CDS YP_004604370.1 336324403 10816516 complement(2333020..2335065) 1 NC_015672.1 PFAM: Domain of unknown function (DUF3394); DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ddf:DEFDS_1847 TRAP-type transporter substrate-binding protein; SPTR: TRAP-type transport system, substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter, 4TM/12TM fusion protein 2335065 10816516 Flexsi_2180 Flexistipes sinusarabici DSM 4947 TRAP transporter, 4TM/12TM fusion protein YP_004604370.1 2333020 R 717231 CDS YP_004604371.1 336324404 10816517 complement(2335170..2336165) 1 NC_015672.1 PFAM: NMT1/THI5 like; TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG0322 Nuclease subunit of the excinuclease complex; HAMAP: UvrABC system protein C; InterPro IPR004791:IPR000305:IPR001943:IPR001162; KEGG: cni:Calni_1412 excinuclease abc, C subunit; PFAM: Excinuclease ABC, C subunit, C-terminal; Excinuclease ABC, C subunit, N-terminal; UvrB/UvrC protein; SMART: Excinuclease ABC, C subunit, N-terminal; SPTR: UvrABC system protein C; TIGRFAM: Excinuclease ABC, C subunit; TRAP transporter solute receptor, TAXI family 2336165 10816517 Flexsi_2181 Flexistipes sinusarabici DSM 4947 TRAP transporter solute receptor, TAXI family YP_004604371.1 2335170 R 717231 CDS YP_004604372.1 336324405 10816518 2336738..2338552 1 NC_015672.1 PFAM: UvrB/uvrC motif; UvrC Helix-hairpin-helix N-terminal; GIY-YIG catalytic domain; TIGRFAM: excinuclease ABC, C subunit; COGs: COG0797 Lipoprotein; InterPro IPR012997:IPR005132:IPR007730; KEGG: ddf:DEFDS_2081 rare lipoprotein A; PFAM: Rare lipoprotein A; Sporulation/cell division region, bacteria; SPTR: Rare lipoprotein A; TIGRFAM: Rare lipoprotein A, bacterial; UvrABC system protein C 2338552 10816518 Flexsi_2182 Flexistipes sinusarabici DSM 4947 UvrABC system protein C YP_004604372.1 2336738 D 717231 CDS YP_004604373.1 336324406 10816519 complement(2338567..2339286) 1 NC_015672.1 PFAM: Rare lipoprotein A (RlpA)-like double-psi beta-barrel; Sporulation related domain; TIGRFAM: rare lipoprotein A; COGs: COG2603 ATPase; InterPro IPR017582:IPR001763; KEGG: dap:Dacet_0054 tRNA 2-selenouridine synthase; PFAM: Rhodanese-like; SMART: Rhodanese-like; SPTR: tRNA 2-selenouridine synthase; TIGRFAM: tRNA 2-selenouridine synthase; rare lipoprotein A 2339286 10816519 Flexsi_2183 Flexistipes sinusarabici DSM 4947 rare lipoprotein A YP_004604373.1 2338567 R 717231 CDS YP_004604374.1 336324407 10816520 complement(2339264..2340313) 1 NC_015672.1 PFAM: Rhodanese-like domain; TIGRFAM: tRNA 2-selenouridine synthase; COGs: COG0583 Transcriptional regulator; InterPro IPR000847:IPR005119; KEGG: cni:Calni_1696 transcriptional regulator, LysR family; PFAM: LysR, substrate-binding; HTH transcriptional regulator, LysR; SPTR: Transcriptional regulator, LysR family; tRNA 2-selenouridine synthase 2340313 10816520 Flexsi_2184 Flexistipes sinusarabici DSM 4947 tRNA 2-selenouridine synthase YP_004604374.1 2339264 R 717231 CDS YP_004604375.1 336324408 10816521 complement(2340314..2341207) 1 NC_015672.1 PFAM: Bacterial regulatory helix-turn-helix protein, lysR family; LysR substrate binding domain; COGs: COG0260 Leucyl aminopeptidase; HAMAP: cytosol aminopeptidase; InterPro IPR000819; KEGG: ddf:DEFDS_2072 leucyl aminopeptidase; PFAM: Peptidase M17, leucyl aminopeptidase, C-terminal; SPTR: Probable cytosol aminopeptidase; LysR family transcriptional regulator 2341207 10816521 Flexsi_2185 Flexistipes sinusarabici DSM 4947 LysR family transcriptional regulator YP_004604375.1 2340314 R 717231 CDS YP_004604376.1 336324409 10816522 complement(2341409..2342902) 1 NC_015672.1 PFAM: Cytosol aminopeptidase family, catalytic domain; Cytosol aminopeptidase family, N-terminal domain; COGs: COG1397 ADP-ribosylglycohydrolase; InterPro IPR005502; KEGG: tcx:Tcr_1009 ADP-ribosylation/crystallin J1; PFAM: ADP-ribosylation/Crystallin J1; SPTR: ADP-ribosylglycohydrolase family protein; cytosol aminopeptidase 2342902 10816522 Flexsi_2186 Flexistipes sinusarabici DSM 4947 cytosol aminopeptidase YP_004604376.1 2341409 R 717231 CDS YP_004604377.1 336324410 10816523 2343095..2344159 1 NC_015672.1 PFAM: ADP-ribosylglycohydrolase; KEGG: ddf:DEFDS_1792 hypothetical protein; SPTR: Putative uncharacterized protein; ADP-ribosylation/Crystallin J1 2344159 10816523 Flexsi_2187 Flexistipes sinusarabici DSM 4947 ADP-ribosylation/Crystallin J1 YP_004604377.1 2343095 D 717231 CDS YP_004604378.1 336324411 10816524 2344335..2345615 1 NC_015672.1 COGs: COG2105 conserved hypothetical protein; InterPro IPR009288; KEGG: ddf:DEFDS_1791 hypothetical protein; PFAM: AIG2-like; SPTR: Putative uncharacterized protein; hypothetical protein 2345615 10816524 Flexsi_2188 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604378.1 2344335 D 717231 CDS YP_004604379.1 336324412 10816525 2345625..2346122 1 NC_015672.1 PFAM: AIG2-like family; AIG2 family protein 2346122 10816525 Flexsi_2189 Flexistipes sinusarabici DSM 4947 AIG2 family protein YP_004604379.1 2345625 D 717231 CDS YP_004604380.1 336324413 10816526 2346285..2346521 1 NC_015672.1 COGs: COG5421 Transposase; KEGG: msv:Mesil_3173 transposase IS4 family protein; SPTR: Transposase IS4 family protein; hypothetical protein 2346521 10816526 Flexsi_2190 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604380.1 2346285 D 717231 CDS YP_004604381.1 336324414 10816527 2346643..2348055 1 NC_015672.1 PFAM: Transposase DDE domain; InterPro IPR002559; KEGG: sun:SUN_2108 transposase; PFAM: Transposase, IS4-like; SPTR: Transposase IS4; hypothetical protein 2348055 10816527 Flexsi_2191 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604381.1 2346643 D 717231 CDS YP_004604382.1 336324415 10816528 2348168..2349535 1 NC_015672.1 PFAM: Transposase domain (DUF772); transposase IS4 family protein 2349535 10816528 Flexsi_2192 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604382.1 2348168 D 717231 CDS YP_004604383.1 336324416 10816529 2349528..2349965 1 NC_015672.1 PFAM: Response regulator receiver domain; COGs: COG0792 endonuclease distantly related to Holliday junction resolvase; HAMAP: Uncharacterised protein family UPF0102; InterPro IPR003509; KEGG: dap:Dacet_2411 hypothetical protein; PFAM: Uncharacterised protein family UPF0102; SPTR: UPF0102 protein Dacet_2411; TIGRFAM: Uncharacterised protein family UPF0102; hypothetical protein 2349965 10816529 Flexsi_2193 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604383.1 2349528 D 717231 CDS YP_004604384.1 336324417 10816530 complement(2349955..2350299) 1 NC_015672.1 PFAM: Uncharacterised protein family UPF0102; TIGRFAM: TIGR00252 family protein; COGs: COG0164 Ribonuclease HII; InterPro IPR001352; KEGG: cni:Calni_1995 ribonuclease H; PFAM: Ribonuclease HII/HIII; PRIAM: Ribonuclease H; SPTR: Ribonuclease; hypothetical protein 2350299 10816530 Flexsi_2194 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604384.1 2349955 R 717231 CDS YP_004604385.1 336324418 10816531 complement(2350277..2350840) 1 NC_015672.1 PFAM: Ribonuclease HII; COGs: COG0378 Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase; InterPro IPR004392:IPR003495; KEGG: cni:Calni_1996 hydrogenase accessory protein HypB; PFAM: Cobalamin (vitamin B12) biosynthesis CobW-like; SPTR: Hydrogenase accessory protein HypB; TIGRFAM: Hydrogenase accessory protein HypB; ribonuclease H 2350840 10816531 Flexsi_2195 Flexistipes sinusarabici DSM 4947 ribonuclease H YP_004604385.1 2350277 R 717231 CDS YP_004604386.1 336324419 10816532 complement(2350837..2351505) 1 NC_015672.1 PFAM: CobW/HypB/UreG, nucleotide-binding domain; TIGRFAM: hydrogenase accessory protein HypB; COGs: COG0375 Zn finger protein HypA/HybF (possibly regulating hydrogenase expression); HAMAP: Hydrogenase nickel incorporation protein HypA/HybF; InterPro IPR000688; KEGG: ddf:DEFDS_0183 hydrogenase expression/synthesis protein HypA; PFAM: Hydrogenase nickel incorporation protein HypA/HybF; SPTR: Probable hydrogenase nickel incorporation protein hypA; TIGRFAM: Hydrogenase nickel incorporation protein HypA/HybF; hydrogenase nickel incorporation protein HypB 2351505 10816532 Flexsi_2196 Flexistipes sinusarabici DSM 4947 hydrogenase nickel incorporation protein HypB YP_004604386.1 2350837 R 717231 CDS YP_004604387.1 336324420 10816533 complement(2351505..2351846) 1 NC_015672.1 PFAM: Hydrogenase expression/synthesis hypA family; TIGRFAM: hydrogenase nickel insertion protein HypA; COGs: COG3605 Signal transduction protein containing GAF and PtsI domains; InterPro IPR003018:IPR008731:IPR008279:IPR000121; KEGG: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilising enzyme; Phosphotransferase system, PEP-utilising enzyme, N-terminal; GAF; PEP-utilising enzyme, mobile region; PRIAM: Phosphoenolpyruvate--protein phosphotransferase; SMART: GAF; SPTR: Phosphoenolpyruvate-protein phosphotransferase; hydrogenase nickel incorporation protein HypA 2351846 10816533 Flexsi_2197 Flexistipes sinusarabici DSM 4947 hydrogenase nickel incorporation protein HypA YP_004604387.1 2351505 R 717231 CDS YP_004604388.1 336324421 10816534 2352080..2354203 1 NC_015672.1 PFAM: GAF domain; PEP-utilising enzyme, mobile domain; PEP-utilising enzyme, TIM barrel domain; PEP-utilising enzyme, N-terminal; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; COGs: COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductase; InterPro IPR002489:IPR006076:IPR001327:IPR001450; KEGG: ddf:DEFDS_2136 ferredoxin-dependent glutamate synthase subunit beta; PFAM: FAD dependent oxidoreductase; Glutamate synthase, alpha subunit, C-terminal; Pyridine nucleotide-disulphide oxidoreductase, NAD-binding region; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Glutamate synthase (NADPH); SPTR: Ferredoxin-dependent glutamate synthase, beta subunit; protein PtsP 2354203 10816534 Flexsi_2198 Flexistipes sinusarabici DSM 4947 protein PtsP YP_004604388.1 2352080 D 717231 CDS YP_004604389.1 336324422 10816535 complement(2354499..2356838) 1 NC_015672.1 PFAM: Pyridine nucleotide-disulphide oxidoreductase; GXGXG motif; COGs: COG0069 Glutamate synthase domain 2; InterPro IPR001450:IPR002932; KEGG: ddf:DEFDS_2137 ferredoxin-dependent glutamate synthase subunit alpha; PFAM: Glutamate synthase, central-C; 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; PRIAM: Glutamate synthase (NADPH); SPTR: Ferredoxin-dependent glutamate synthase, alpha subunit; glutamate synthase 2356838 10816535 Flexsi_2199 Flexistipes sinusarabici DSM 4947 glutamate synthase YP_004604389.1 2354499 R 717231 CDS YP_004604390.1 336324423 10816536 complement(2356851..2358494) 1 NC_015672.1 PFAM: 4Fe-4S binding domain; Conserved region in glutamate synthase; KEGG: ddf:DEFDS_2138 hypothetical protein; SPTR: Putative uncharacterized protein; glutamate synthase 2358494 10816536 Flexsi_2200 Flexistipes sinusarabici DSM 4947 glutamate synthase YP_004604390.1 2356851 R 717231 CDS YP_004604391.1 336324424 10816537 complement(2358482..2359588) 1 NC_015672.1 PFAM: Glutamine amidotransferases class-II; COGs: COG0436 Aspartate/tyrosine/aromatic aminotransferase; InterPro IPR004839; KEGG: dap:Dacet_1550 aminotransferase class I and II; PFAM: Aminotransferase, class I/II; PRIAM: Aspartate transaminase; SPTR: Aminotransferase class I and II; hypothetical protein 2359588 10816537 Flexsi_2201 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604391.1 2358482 R 717231 CDS YP_004604392.1 336324425 10816538 2359784..2361067 1 NC_015672.1 PFAM: Aminotransferase class I and II; COGs: COG0261 Ribosomal protein L21; HAMAP: Ribosomal protein L21; InterPro IPR001787; KEGG: ddf:DEFDS_0265 50S ribosomal protein L21; PFAM: Ribosomal protein L21; SPTR: 50S ribosomal protein L21; TIGRFAM: Ribosomal protein L21; aspartate transaminase 2361067 10816538 Flexsi_2202 Flexistipes sinusarabici DSM 4947 aspartate transaminase YP_004604392.1 2359784 D 717231 CDS YP_004604393.1 336324426 10816539 2361427..2361738 1 NC_015672.1 PFAM: Ribosomal prokaryotic L21 protein; TIGRFAM: ribosomal protein L21; COGs: COG0211 Ribosomal protein L27; HAMAP: Ribosomal protein L27; InterPro IPR001684; KEGG: ddf:DEFDS_0266 50S ribosomal protein L27; PFAM: Ribosomal protein L27; SPTR: 50S ribosomal protein L27; TIGRFAM: Ribosomal protein L27; 50S ribosomal protein L21 2361738 10816539 Flexsi_2203 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L21 YP_004604393.1 2361427 D 717231 CDS YP_004604394.1 336324427 10816540 2361752..2362015 1 NC_015672.1 PFAM: Ribosomal L27 protein; TIGRFAM: ribosomal protein L27; COGs: COG0536 GTPase; HAMAP: GTPase obg; InterPro IPR014100:IPR006169:IPR002917; KEGG: cni:Calni_2040 gtp-binding protein obg/CgtA; PFAM: GTP1/OBG subdomain; GTP-binding protein, HSR1-related; SPTR: GTPase obg; TIGRFAM: GTP-binding protein Obg/CgtA; 50S ribosomal protein L27 2362015 10816540 Flexsi_2204 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L27 YP_004604394.1 2361752 D 717231 CDS YP_004604395.1 336324428 10816541 2362071..2363084 1 NC_015672.1 PFAM: GTPase of unknown function; GTP1/OBG; TIGRFAM: Obg family GTPase CgtA; InterPro IPR007922; KEGG: ddf:DEFDS_0268 hypothetical protein; PFAM: Protein of unknown function DUF721; SPTR: Putative uncharacterized protein; GTPase obg 2363084 10816541 Flexsi_2205 Flexistipes sinusarabici DSM 4947 GTPase obg YP_004604395.1 2362071 D 717231 CDS YP_004604396.1 336324429 10816542 2363074..2363517 1 NC_015672.1 PFAM: Protein of unknown function (DUF721); COGs: COG0242 N-formylmethionyl-tRNA deformylase; HAMAP: Formylmethionine deformylase; InterPro IPR000181; KEGG: dap:Dacet_0028 peptide deformylase; PFAM: Formylmethionine deformylase; SPTR: Peptide deformylase 1; TIGRFAM: Formylmethionine deformylase; hypothetical protein 2363517 10816542 Flexsi_2206 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604396.1 2363074 D 717231 CDS YP_004604397.1 336324430 10816543 2363555..2364064 1 NC_015672.1 PFAM: Polypeptide deformylase; TIGRFAM: peptide deformylase; COGs: COG2183 Transcriptional accessory protein; InterPro IPR018974:IPR003029:IPR006641; KEGG: dap:Dacet_1817 Tex-like protein protein-like protein; PFAM: Tex-like protein, N-terminal; Ribosomal protein S1, RNA binding domain; SMART: Resolvase, RNase H-like fold; SPTR: Tex-like protein protein-like protein; peptide deformylase 2364064 10816543 Flexsi_2207 Flexistipes sinusarabici DSM 4947 peptide deformylase YP_004604397.1 2363555 D 717231 CDS YP_004604398.1 336324431 10816544 2364260..2366374 1 NC_015672.1 PFAM: Tex-like protein N-terminal domain; S1 RNA binding domain; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR011910:IPR002201; KEGG: ddf:DEFDS_1147 ADP-heptose:LPS heptosyltransferase II; PFAM: Glycosyl transferase, family 9; SPTR: ADP-heptose:LPS heptosyltransferase II; TIGRFAM: Lipopolysaccharide heptosyltransferase II; Tex-like protein 2366374 10816544 Flexsi_2208 Flexistipes sinusarabici DSM 4947 Tex-like protein YP_004604398.1 2364260 D 717231 CDS YP_004604399.1 336324432 10816545 2366389..2367429 1 NC_015672.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); TIGRFAM: lipopolysaccharide heptosyltransferase II; COGs: COG0859 ADP-heptose:LPS heptosyltransferase; InterPro IPR002201; KEGG: ddf:DEFDS_1146 heptosyltransferase family protein; PFAM: Glycosyl transferase, family 9; SPTR: Heptosyltransferase family protein; lipopolysaccharide heptosyltransferase II 2367429 10816545 Flexsi_2209 Flexistipes sinusarabici DSM 4947 lipopolysaccharide heptosyltransferase II YP_004604399.1 2366389 D 717231 CDS YP_004604400.1 336324433 10816546 2367426..2368379 1 NC_015672.1 PFAM: Glycosyltransferase family 9 (heptosyltransferase); COGs: COG1434 conserved hypothetical protein; InterPro IPR003848; KEGG: saf:SULAZ_1499 hypothetical protein; PFAM: Protein of unknown function DUF218; SPTR: Putative uncharacterized protein; glycosyl transferase family protein 2368379 10816546 Flexsi_2210 Flexistipes sinusarabici DSM 4947 glycosyl transferase family protein YP_004604400.1 2367426 D 717231 CDS YP_004604401.1 336324434 10816547 2368383..2369153 1 NC_015672.1 PFAM: DUF218 domain; COGs: COG5421 Transposase; KEGG: msv:Mesil_3173 transposase IS4 family protein; SPTR: Transposase IS4 family protein; hypothetical protein 2369153 10816547 Flexsi_2211 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604401.1 2368383 D 717231 CDS YP_004604402.1 336324435 10816548 complement(2369370..2369858) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; hypothetical protein 2369858 10816548 Flexsi_2212 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604402.1 2369370 R 717231 CDS YP_004604403.1 336324436 10816550 2371627..2372556 1 NC_015672.1 PFAM: Peptidase family M23; COGs: COG1364 N-acetylglutamate synthase (N-acetylornithine aminotransferase); HAMAP: Arginine biosynthesis protein ArgJ; InterPro IPR002813; KEGG: ddf:DEFDS_2004 arginine biosynthesis bifunctional protein ArgJ; PFAM: Arginine biosynthesis protein ArgJ; PRIAM: Glutamate N-acetyltransferase; SPTR: Arginine biosynthesis bifunctional protein ArgJ; TIGRFAM: Arginine biosynthesis protein ArgJ; peptidase M23 2372556 10816550 Flexsi_2214 Flexistipes sinusarabici DSM 4947 peptidase M23 YP_004604403.1 2371627 D 717231 CDS YP_004604404.1 336324437 10816551 complement(2372563..2373771) 1 NC_015672.1 PFAM: ArgJ family; TIGRFAM: glutamate N-acetyltransferase/amino-acid acetyltransferase; COGs: COG0002 Acetylglutamate semialdehyde dehydrogenase; HAMAP: N-acetyl-gamma-glutamyl-phosphate reductase; InterPro IPR000706:IPR000534:IPR012280; KEGG: ddf:DEFDS_0210 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase, NAD-binding; Semialdehyde dehydrogenase, dimerisation region; PRIAM: N-acetyl-gamma-glutamyl-phosphate reductase; SPTR: N-acetyl-gamma-glutamyl-phosphate reductase; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; arginine biosynthesis protein ArgJ 2373771 10816551 Flexsi_2215 Flexistipes sinusarabici DSM 4947 arginine biosynthesis protein ArgJ YP_004604404.1 2372563 R 717231 CDS YP_004604405.1 336324438 10816552 complement(2373780..2374784) 1 NC_015672.1 PFAM: Semialdehyde dehydrogenase, dimerisation domain; Semialdehyde dehydrogenase, NAD binding domain; TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase, common form; COGs: COG0140 Phosphoribosyl-ATP pyrophosphohydrolase; HAMAP: Phosphoribosyl-ATP pyrophosphatase; InterPro IPR008179; KEGG: cni:Calni_0265 phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; SPTR: Phosphoribosyl-ATP pyrophosphatase; TIGRFAM: Phosphoribosyl-ATP pyrophosphohydrolase; N-acetyl-gamma-glutamyl-phosphate reductase 2374784 10816552 Flexsi_2216 Flexistipes sinusarabici DSM 4947 N-acetyl-gamma-glutamyl-phosphate reductase YP_004604405.1 2373780 R 717231 CDS YP_004604406.1 336324439 10816553 complement(2375006..2375290) 1 NC_015672.1 PFAM: Phosphoribosyl-ATP pyrophosphohydrolase; TIGRFAM: phosphoribosyl-ATP pyrophosphohydrolase; COGs: COG0107 Imidazoleglycerol-phosphate synthase; HAMAP: Imidazole glycerol phosphate synthase subunit hisF; InterPro IPR004651:IPR006062; KEGG: dap:Dacet_3004 imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: Histidine biosynthesis; PRIAM:1-(5-phosphoribosyl)-5-((5-phosphoribosylamin o)methylideneamino)imidazole-4-carboxamideisomerase; SPTR: Imidazole glycerol phosphate synthase subunit hisF; TIGRFAM: Histidine biosynthesis, HisF; phosphoribosyl-ATP pyrophosphatase 2375290 10816553 Flexsi_2217 Flexistipes sinusarabici DSM 4947 phosphoribosyl-ATP pyrophosphatase YP_004604406.1 2375006 R 717231 CDS YP_004604407.1 336324440 10816554 complement(2375299..2376057) 1 NC_015672.1 PFAM: Histidine biosynthesis protein; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; COGs: COG2814 Arabinose efflux permease; InterPro IPR004638:IPR011701; KEGG: cni:Calni_1901 drug resistance transporter, EmrB/QacA subfamily; PFAM: Major facilitator superfamily MFS-1; SPTR: Drug resistance transporter, EmrB/QacA subfamily; TIGRFAM: Drug resistance transporter EmrB/QacA subfamily; imidazole glycerol phosphate synthase subunit hisF 2376057 10816554 Flexsi_2218 Flexistipes sinusarabici DSM 4947 imidazole glycerol phosphate synthase subunit hisF YP_004604407.1 2375299 R 717231 CDS YP_004604408.1 336324441 10816555 complement(2376101..2377672) 1 NC_015672.1 PFAM: Major Facilitator Superfamily; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; COGs: COG1566 Multidrug resistance efflux pump; InterPro IPR006143; KEGG: ddf:DEFDS_0616 multidrug-efflux transporter MFP family; PFAM: Secretion protein HlyD; SPTR: Multidrug-efflux transporter, MFP family; EmrB/QacA subfamily drug resistance transporter 2377672 10816555 Flexsi_2219 Flexistipes sinusarabici DSM 4947 EmrB/QacA subfamily drug resistance transporter YP_004604408.1 2376101 R 717231 CDS YP_004604409.1 336324442 10816556 complement(2377676..2378803) 1 NC_015672.1 PFAM: HlyD family secretion protein; COGs: COG1538 Outer membrane protein; InterPro IPR003423; KEGG: ddf:DEFDS_0615 hypothetical protein; PFAM: Outer membrane efflux protein; SPTR: Putative uncharacterized protein; secretion protein HlyD family protein 2378803 10816556 Flexsi_2220 Flexistipes sinusarabici DSM 4947 secretion protein HlyD family protein YP_004604409.1 2377676 R 717231 CDS YP_004604410.1 336324443 10816557 complement(2378808..2380100) 1 NC_015672.1 PFAM: Outer membrane efflux protein; COGs: COG1330 Exonuclease V gamma subunit; InterPro IPR006697; KEGG: gur:Gura_0582 exodeoxyribonuclease V, gamma subunit; PFAM: Exodeoxyribonuclease V, RecC subunit; PRIAM: Exodeoxyribonuclease V; SPTR: DNA helicase/exodeoxyribonuclease V, gamma subunit; TIGRFAM: Exodeoxyribonuclease V, RecC subunit; outer membrane efflux protein 2380100 10816557 Flexsi_2221 Flexistipes sinusarabici DSM 4947 outer membrane efflux protein YP_004604410.1 2378808 R 717231 CDS YP_004604411.1 336324444 10816558 2380504..2383728 1 NC_015672.1 PFAM: Exodeoxyribonuclease V, gamma subunit; TIGRFAM: exodeoxyribonuclease V, gamma subunit; COGs: COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains); InterPro IPR004586:IPR000212; KEGG: sat:SYN_02552 exodeoxyribonuclease V subunit beta; PFAM: DNA helicase, UvrD/REP type; SPTR: Putative uncharacterized protein; TIGRFAM: Exodeoxyribonuclease V, beta subunit; exodeoxyribonuclease V subunit gamma 2383728 10816558 Flexsi_2222 Flexistipes sinusarabici DSM 4947 exodeoxyribonuclease V subunit gamma YP_004604411.1 2380504 D 717231 CDS YP_004604412.1 336324445 10816559 2383718..2387410 1 NC_015672.1 PFAM: UvrD/REP helicase; TIGRFAM: exodeoxyribonuclease V, beta subunit; COGs: COG0507 ATP-dependent exoDNAse (exonuclease V) alpha subunit - helicase superfamily I member; InterPro IPR006344:IPR000606; KEGG: gem:GM21_0323 exodeoxyribonuclease V, alpha subunit; PFAM: RNA helicase 1, viral; PRIAM: Exodeoxyribonuclease V; SPTR: Exodeoxyribonuclease V, alpha subunit; TIGRFAM: Exodeoxyribonuclease V, alpha subunit; exodeoxyribonuclease V subunit beta 2387410 10816559 Flexsi_2223 Flexistipes sinusarabici DSM 4947 exodeoxyribonuclease V subunit beta YP_004604412.1 2383718 D 717231 CDS YP_004604413.1 336324446 10816560 2387397..2389208 1 NC_015672.1 PFAM: Putative ATPase (DUF699); Viral (Superfamily 1) RNA helicase; TIGRFAM: exodeoxyribonuclease V, alpha subunit; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: dat:HRM2_35330 putative monovalent cation/H+ antiporter subunit D; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: MnhA1; exodeoxyribonuclease V subunit alpha 2389208 10816560 Flexsi_2224 Flexistipes sinusarabici DSM 4947 exodeoxyribonuclease V subunit alpha YP_004604413.1 2387397 D 717231 CDS YP_004604414.1 336324447 10816561 complement(2389315..2391057) 1 NC_015672.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; KEGG: dat:HRM2_35340 hypothetical protein; SPTR: Putative uncharacterized protein; NADH dehydrogenase (quinone) 2391057 10816561 Flexsi_2225 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004604414.1 2389315 R 717231 CDS YP_004604415.1 336324448 10816562 complement(2391050..2391295) 1 NC_015672.1 hypothetical protein 2391295 10816562 Flexsi_2226 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604415.1 2391050 R 717231 CDS YP_004604416.1 336324449 10816563 complement(2391309..2391455) 1 NC_015672.1 COGs: COG1009 NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter MnhA subunit; InterPro IPR001750; KEGG: cni:Calni_0531 multisubunit sodium/proton antiporter, mrpd subunit; PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: Multisubunit sodium/proton antiporter, MrpD subunit; hypothetical protein 2391455 10816563 Flexsi_2227 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604416.1 2391309 R 717231 CDS YP_004604417.1 336324450 10816564 complement(2391455..2392939) 1 NC_015672.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; NADH-Ubiquinone oxidoreductase (complex I), chain 5 N-terminus; COGs: COG0651 Formate hydrogenlyase subunit 3/Multisubunit Na+/H+ antiporter MnhD subunit; InterPro IPR001750; KEGG: cni:Calni_0530 NADH/ubiquinone/plastoquinone (complex i); PFAM: NADH:ubiquinone/plastoquinone oxidoreductase; PRIAM: NADH dehydrogenase (quinone); SPTR: NADH/Ubiquinone/plastoquinone (Complex I); NADH dehydrogenase (quinone) 2392939 10816564 Flexsi_2228 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004604417.1 2391455 R 717231 CDS YP_004604418.1 336324451 10816565 complement(2392930..2394438) 1 NC_015672.1 PFAM: NADH-Ubiquinone/plastoquinone (complex I), various chains; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain N; COGs: COG1006 Multisubunit Na+/H+ antiporter MnhC subunit; InterPro IPR001133; KEGG: dal:Dalk_4921 NADH-ubiquinone oxidoreductase chain 4L; PFAM: NADH:ubiquinone/quinone oxidoreductase, chain 4L; SPTR: NADH-ubiquinone oxidoreductase chain 4L; NADH dehydrogenase (quinone) 2394438 10816565 Flexsi_2229 Flexistipes sinusarabici DSM 4947 NADH dehydrogenase (quinone) YP_004604418.1 2392930 R 717231 CDS YP_004604419.1 336324452 10816566 complement(2394435..2394824) 1 NC_015672.1 PFAM: NADH-ubiquinone/plastoquinone oxidoreductase chain 4L; InterPro IPR007182; KEGG: cni:Calni_0528 na+/h+ antiporter MnhB subunit-related protein; PFAM: Na+/H+ antiporter MnhB subunit-related protein; SPTR: Na+/H+ antiporter MnhB subunit-related protein; NADH-ubiquinone oxidoreductase chain 4L 2394824 10816566 Flexsi_2230 Flexistipes sinusarabici DSM 4947 NADH-ubiquinone oxidoreductase chain 4L YP_004604419.1 2394435 R 717231 CDS YP_004604420.1 336324453 10816567 complement(2394817..2395239) 1 NC_015672.1 PFAM: Domain related to MnhB subunit of Na+/H+ antiporter; KEGG: cni:Calni_0527 multicomponent na+-h+ antiporter subunit A; SPTR: Putative multicomponent Na+-H+ antiporter subunit A; Na+/H+ antiporter MnhB subunit-like protein 2395239 10816567 Flexsi_2231 Flexistipes sinusarabici DSM 4947 Na+/H+ antiporter MnhB subunit-like protein YP_004604420.1 2394817 R 717231 CDS YP_004604421.1 336324454 10816568 complement(2395229..2395789) 1 NC_015672.1 COGs: COG1320 Multisubunit Na+/H+ antiporter MnhG subunit; InterPro IPR005133; KEGG: cni:Calni_0526 monovalent cation/proton antiporter, mnhg/PhaG subunit; PFAM: Na+/H+ antiporter subunit; SPTR: Monovalent cation/proton antiporter, MnhG/PhaG subunit; TIGRFAM: Na+/H+ antiporter subunit; multicomponent na+-h+ antiporter subunit A 2395789 10816568 Flexsi_2232 Flexistipes sinusarabici DSM 4947 multicomponent na+-h+ antiporter subunit A YP_004604421.1 2395229 R 717231 CDS YP_004604422.1 336324455 10816569 complement(2395776..2396093) 1 NC_015672.1 PFAM: Na+/H+ antiporter subunit; TIGRFAM: monovalent cation/proton antiporter, MnhG/PhaG subunit; InterPro IPR007208; KEGG: cni:Calni_0525 multisubunit sodium/proton antiporter, mrpf subunit; PFAM: Multiple resistance and pH regulation protein F; SPTR: Multisubunit sodium/proton antiporter, MrpF subunit; monovalent cation/proton antiporter subunit MnhG/PhaG 2396093 10816569 Flexsi_2233 Flexistipes sinusarabici DSM 4947 monovalent cation/proton antiporter subunit MnhG/PhaG YP_004604422.1 2395776 R 717231 CDS YP_004604423.1 336324456 10816570 complement(2396111..2396365) 1 NC_015672.1 PFAM: Multiple resistance and pH regulation protein F (MrpF / PhaF); COGs: COG1863 Multisubunit Na+/H+ antiporter MnhE subunit; InterPro IPR002758; KEGG: cni:Calni_0524 cation antiporter; PFAM: cation antiporter; SPTR: Cation antiporter; multiple resistance and pH regulation protein F 2396365 10816570 Flexsi_2234 Flexistipes sinusarabici DSM 4947 multiple resistance and pH regulation protein F YP_004604423.1 2396111 R 717231 CDS YP_004604424.1 336324457 10816571 complement(2396368..2396835) 1 NC_015672.1 PFAM: Na+/H+ ion antiporter subunit; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR001453; KEGG: ddf:DEFDS_0823 molybdopterin biosynthesis protein; PFAM: Molybdopterin binding; SPTR: Molybdopterin biosynthesis protein; cation antiporter 2396835 10816571 Flexsi_2235 Flexistipes sinusarabici DSM 4947 cation antiporter YP_004604424.1 2396368 R 717231 CDS YP_004604425.1 336324458 10816572 2397406..2398437 1 NC_015672.1 PFAM: Probable molybdopterin binding domain; TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG3842 ABC-type spermidine/putrescine transport systems ATPase components; InterPro IPR003439:IPR005116:IPR003593; KEGG: ddf:DEFDS_0824 molybdate ABC transporter ATP-binding protein; PFAM: ABC transporter-like; Transport-associated OB, type 1; PRIAM: Molybdate-transporting ATPase; SMART: ATPase, AAA+ type, core; SPTR: Molybdate ABC transporter, ATP-binding protein; molybdopterin binding domain-containing protein 2398437 10816572 Flexsi_2236 Flexistipes sinusarabici DSM 4947 molybdopterin binding domain-containing protein YP_004604425.1 2397406 D 717231 CDS YP_004604426.1 336324459 10816573 2398425..2399495 1 NC_015672.1 PFAM: ABC transporter; TOBE domain; COGs: COG0725 ABC-type molybdate transport system periplasmic component; InterPro IPR005950:IPR006059; KEGG: ddf:DEFDS_0825 molybdate ABC transporter substrate-binding protein; PFAM: Bacterial extracellular solute-binding, family 1; SPTR: Molybdate ABC transporter, substrate-binding protein; TIGRFAM: Molybdenum ABC transporter, periplasmic binding protein; molybdate-transporting ATPase 2399495 10816573 Flexsi_2237 Flexistipes sinusarabici DSM 4947 molybdate-transporting ATPase YP_004604426.1 2398425 D 717231 CDS YP_004604427.1 336324460 10816574 2399508..2400254 1 NC_015672.1 PFAM: Bacterial extracellular solute-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; COGs: COG4149 ABC-type molybdate transport system permease component; InterPro IPR000515; KEGG: ddf:DEFDS_0826 molybdate ABC transporter permease; PFAM: Binding-protein-dependent transport systems inner membrane component; SPTR: Molybdate ABC transporter, permease; molybdenum ABC transporter periplasmic molybdate-binding protein 2400254 10816574 Flexsi_2238 Flexistipes sinusarabici DSM 4947 molybdenum ABC transporter periplasmic molybdate-binding protein YP_004604427.1 2399508 D 717231 CDS YP_004604428.1 336324461 10816575 2400254..2401030 1 NC_015672.1 PFAM: Binding-protein-dependent transport system inner membrane component; COGs: COG0303 Molybdopterin biosynthesis enzyme; InterPro IPR020817:IPR005110:IPR001453:IPR005111; KEGG: ddf:DEFDS_0827 molybdopterin biosynthesis protein MoeA; PFAM: Molybdopterin binding; MoeA, N-terminal region, domain I/II; MoeA, C-terminal, domain IV; SPTR: Molybdopterin biosynthesis protein MoeA; TIGRFAM: Molybdenum cofactor synthesis; ABC transporter 2401030 10816575 Flexsi_2239 Flexistipes sinusarabici DSM 4947 ABC transporter YP_004604428.1 2400254 D 717231 CDS YP_004604429.1 336324462 10816576 2401035..2402222 1 NC_015672.1 PFAM: Probable molybdopterin binding domain; MoeA N-terminal region (domain I and II); MoeA C-terminal region (domain IV); TIGRFAM: molybdenum cofactor synthesis domain; COGs: COG0731 Fe-S oxidoreductase; InterPro IPR007197:IPR006638; KEGG: ddf:DEFDS_0828 hypothetical protein; PFAM: Radical SAM; SMART: Elongator protein 3/MiaB/NifB; SPTR: Putative uncharacterized protein; molybdenum cofactor synthesis domain-containing protein 2402222 10816576 Flexsi_2240 Flexistipes sinusarabici DSM 4947 molybdenum cofactor synthesis domain-containing protein YP_004604429.1 2401035 D 717231 CDS YP_004604430.1 336324463 10816577 2402226..2403170 1 NC_015672.1 PFAM: Radical SAM superfamily; HAMAP: Ribosomal protein L25; InterPro IPR001021; KEGG: dap:Dacet_0468 ribosomal 5S rRNA E-loop binding protein Ctc/L25/TL5; SPTR: 50S ribosomal protein L25; TIGRFAM: Ribosomal protein L25; radical SAM protein 2403170 10816577 Flexsi_2241 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004604430.1 2402226 D 717231 CDS YP_004604431.1 336324464 10816578 complement(2403176..2403820) 1 NC_015672.1 PFAM: Ribosomal L25p family; TIGRFAM: ribosomal protein L25, Ctc-form; KEGG: dap:Dacet_2467 hypothetical protein; SPTR: Putative uncharacterized protein; 50S ribosomal protein L25 2403820 10816578 Flexsi_2242 Flexistipes sinusarabici DSM 4947 50S ribosomal protein L25 YP_004604431.1 2403176 R 717231 CDS YP_004604432.1 336324465 10816579 complement(2404029..2404427) 1 NC_015672.1 This gene is disrupted by insertion of repetitive element; manually curated; hypothetical protein 2404427 10816579 Flexsi_2243 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604432.1 2404029 R 717231 CDS YP_004604433.1 336324466 10816581 complement(2404898..2405947) 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); InterPro IPR014865; KEGG: cni:Calni_0615 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 2405947 10816581 Flexsi_2245 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604433.1 2404898 R 717231 CDS YP_004604434.1 336324467 10816582 complement(2406372..2406860) 1 NC_015672.1 PFAM: DsrE/DsrF-like family; COGs: COG1794 Aspartate racemase; InterPro IPR004380:IPR015942; KEGG: swd:Swoo_1908 aspartate racemase; PFAM: Asp/Glu/hydantoin racemase; SPTR: Aspartate racemase; TIGRFAM: Aspartate racemase; hypothetical protein 2406860 10816582 Flexsi_2246 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604434.1 2406372 R 717231 CDS YP_004604435.1 336324468 10816583 2407231..2407929 1 NC_015672.1 PFAM: Asp/Glu/Hydantoin racemase; TIGRFAM: aspartate racemase; COGs: COG2606 conserved hypothetical protein; InterPro IPR004369:IPR007214; KEGG: glo:Glov_2948 YbaK/EbsC protein; PFAM: YbaK/aminoacyl-tRNA synthetase associated region; SPTR: YbaK/ebsC protein; TIGRFAM: Conserved hypothetical protein CHP00011; aspartate racemase 2407929 10816583 Flexsi_2247 Flexistipes sinusarabici DSM 4947 aspartate racemase YP_004604435.1 2407231 D 717231 CDS YP_004604436.1 336324469 10816584 2408318..2408806 1 NC_015672.1 PFAM: YbaK / prolyl-tRNA synthetases associated domain; TIGRFAM: ybaK/ebsC protein; COGs: COG0546 phosphatase; InterPro IPR006402:IPR006439:IPR005834; KEGG: cni:Calni_0750 had-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase-like hydrolase; PRIAM: Phosphoglycolate phosphatase; SPTR: HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; ybaK/ebsC protein 2408806 10816584 Flexsi_2248 Flexistipes sinusarabici DSM 4947 ybaK/ebsC protein YP_004604436.1 2408318 D 717231 CDS YP_004604437.1 336324470 10816585 2408799..2409443 1 NC_015672.1 PFAM: haloacid dehalogenase-like hydrolase; manually curated; HAD-superfamily hydrolase 2409443 10816585 Flexsi_2249 Flexistipes sinusarabici DSM 4947 HAD-superfamily hydrolase YP_004604437.1 2408799 D 717231 CDS YP_004604438.1 336324471 10816587 2409840..2410952 1 NC_015672.1 PFAM: Alanine dehydrogenase/PNT, C-terminal domain; Alanine dehydrogenase/PNT, N-terminal domain; TIGRFAM: alanine dehydrogenase; COGs: COG1115 Na+/alanine symporter; InterPro IPR001463; KEGG: drt:Dret_0685 amino acid carrier protein; PFAM: Sodium:alanine symporter; SPTR: Amino acid carrier protein; TIGRFAM: Sodium:alanine symporter; alanine dehydrogenase 2410952 10816587 Flexsi_2251 Flexistipes sinusarabici DSM 4947 alanine dehydrogenase YP_004604438.1 2409840 D 717231 CDS YP_004604439.1 336324472 10816588 2410981..2412363 1 NC_015672.1 PFAM: Sodium:alanine symporter family; TIGRFAM: amino acid carrier protein; COGs: COG0535 Fe-S oxidoreductase; InterPro IPR007197; KEGG: ssm:Spirs_1245 radical SAM domain protein; PFAM: Radical SAM; SPTR: Radical SAM domain protein; amino acid carrier protein 2412363 10816588 Flexsi_2252 Flexistipes sinusarabici DSM 4947 amino acid carrier protein YP_004604439.1 2410981 D 717231 CDS YP_004604440.1 336324473 10816589 2412609..2414057 1 NC_015672.1 PFAM: Radical SAM superfamily; COGs: COG0171 NAD synthase; InterPro IPR003694; KEGG: kol:Kole_1677 NAD+ synthetase; PFAM: NAD+ synthase; PRIAM: NAD(+) synthase; SPTR: NH(3)-dependent NAD(+) synthetase; TIGRFAM: NAD+ synthase; radical SAM protein 2414057 10816589 Flexsi_2253 Flexistipes sinusarabici DSM 4947 radical SAM protein YP_004604440.1 2412609 D 717231 CDS YP_004604441.1 336324474 10816590 2414067..2414909 1 NC_015672.1 PFAM: NAD synthase; TIGRFAM: NAD+ synthetase; COGs: COG3621 Patatin; InterPro IPR002641; KEGG: mei:Msip34_1961 patatin; PFAM: Patatin; SPTR: Patatin; NAD+ synthetase 2414909 10816590 Flexsi_2254 Flexistipes sinusarabici DSM 4947 NAD+ synthetase YP_004604441.1 2414067 D 717231 CDS YP_004604442.1 336324475 10816591 2415025..2415960 1 NC_015672.1 PFAM: Patatin-like phospholipase; COGs: COG3344 Retron-type reverse transcriptase; InterPro IPR000477:IPR013597; KEGG: nha:Nham_3886 RNA-directed DNA polymerase (reverse transcriptase); PFAM: RNA-directed DNA polymerase (reverse transcriptase); Group II intron, maturase-specific; SPTR: RNA-directed DNA polymerase (Reverse transcriptase); patatin 2415960 10816591 Flexsi_2255 Flexistipes sinusarabici DSM 4947 patatin YP_004604442.1 2415025 D 717231 CDS YP_004604443.1 336324476 10816592 2416586..2417893 1 NC_015672.1 PFAM: Reverse transcriptase (RNA-dependent DNA polymerase); Group II intron, maturase-specific domain; InterPro IPR003346; KEGG: sat:SYN_03159 transposase; PFAM: Transposase, IS116/IS110/IS902; SPTR: Transposase; RNA-directed DNA polymerase 2417893 10816592 Flexsi_2256 Flexistipes sinusarabici DSM 4947 RNA-directed DNA polymerase YP_004604443.1 2416586 D 717231 CDS YP_004604444.1 336324477 10816593 2418339..2419523 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; KEGG: mfa:Mfla_1151 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS116/IS110/IS902 family protein 2419523 10816593 Flexsi_2257 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004604444.1 2418339 D 717231 CDS YP_004604445.1 336324478 10816594 complement(2419851..2420273) 1 NC_015672.1 hypothetical protein 2420273 10816594 Flexsi_2258 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604445.1 2419851 R 717231 CDS YP_004604446.1 336324479 10816595 complement(2420400..2420783) 1 NC_015672.1 COGs: COG0437 Fe-S-cluster-containing hydrogenase components 1; InterPro IPR001450; KEGG: dba:Dbac_2241 4Fe-4S ferredoxin iron-sulfur binding domain protein; PFAM: 4Fe-4S ferredoxin, iron-sulphur binding, subgroup; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein; hypothetical protein 2420783 10816595 Flexsi_2259 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604446.1 2420400 R 717231 CDS YP_004604447.1 336324480 10816596 complement(2420776..2421348) 1 NC_015672.1 COGs: COG0243 Anaerobic dehydrogenase typically selenocysteine-containing; InterPro IPR006311:IPR006963:IPR006656:IPR006657; KEGG: dba:Dbac_2242 trimethylamine-N-oxide reductase (cytochrome c); PFAM: Molydopterin dinucleotide-binding region; Molybdopterin oxidoreductase; Molybdopterin oxidoreductase Fe4S4 region; PRIAM: Trimethylamine-N-oxide reductase (cytochrome c); SPTR: Trimethylamine-N-oxide reductase (Cytochrome c); 4Fe-4S ferredoxin 2421348 10816596 Flexsi_2260 Flexistipes sinusarabici DSM 4947 4Fe-4S ferredoxin YP_004604447.1 2420776 R 717231 CDS YP_004604448.1 336324481 10816597 complement(2421358..2423625) 1 NC_015672.1 PFAM: Molybdopterin oxidoreductase; Molydopterin dinucleotide binding domain; Molybdopterin oxidoreductase Fe4S4 domain; TIGRFAM: Tat (twin-arginine translocation) pathway signal sequence; COGs: COG3381 Uncharacterized component of anaerobic dehydrogenase; InterPro IPR010395; KEGG: drt:Dret_1230 cytoplasmic chaperone TorD family protein; SPTR: Cytoplasmic chaperone TorD family protein; trimethylamine-N-oxide reductase (cytochrome c) 2423625 10816597 Flexsi_2261 Flexistipes sinusarabici DSM 4947 trimethylamine-N-oxide reductase (cytochrome c) YP_004604448.1 2421358 R 717231 CDS YP_004604449.1 336324482 10816598 complement(2423636..2424169) 1 NC_015672.1 PFAM: Nitrate reductase delta subunit; manually curated; cytoplasmic chaperone TorD family protein 2424169 10816598 Flexsi_2262 Flexistipes sinusarabici DSM 4947 cytoplasmic chaperone TorD family protein YP_004604449.1 2423636 R 717231 CDS YP_004604450.1 336324483 10816600 2425356..2426879 1 NC_015672.1 PFAM: Integrase core domain; InterPro IPR002611; KEGG: toc:Toce_0299 IstB domain protein ATP-binding protein; PFAM: IstB-like ATP-binding protein; SPTR: IstB domain protein ATP-binding protein; integrase catalytic subunit 2426879 10816600 Flexsi_2264 Flexistipes sinusarabici DSM 4947 integrase catalytic subunit YP_004604450.1 2425356 D 717231 CDS YP_004604451.1 336324484 10816601 2426866..2427237 1 NC_015672.1 PFAM: IstB-like ATP binding protein; InterPro IPR002559; KEGG: cni:Calni_2037 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; IstB domain-containing protein ATP-binding protein 2427237 10816601 Flexsi_2265 Flexistipes sinusarabici DSM 4947 IstB domain-containing protein ATP-binding protein YP_004604451.1 2426866 D 717231 CDS YP_004604452.1 336324485 10816602 complement(2427368..2428687) 1 NC_015672.1 PFAM: Transposase DDE domain; manually curated; transposase IS4 family protein 2428687 10816602 Flexsi_2266 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604452.1 2427368 R 717231 CDS YP_004604453.1 336324486 10816604 2429157..2430095 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase IS4 family protein 2430095 10816604 Flexsi_2268 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604453.1 2429157 D 717231 CDS YP_004604454.1 336324487 10816605 complement(2430522..2431625) 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: aeh:Mlg_0129 transposase, IS4 family protein; SPTR: Transposase; transposase IS4 family protein 2431625 10816605 Flexsi_2269 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604454.1 2430522 R 717231 CDS YP_004604455.1 336324488 10816606 complement(2431712..2432197) 1 NC_015672.1 InterPro IPR005243; KEGG: dap:Dacet_2260 redox-active disulfide protein 2; SPTR: Redox-active disulfide protein 2; TIGRFAM: Redox-active disulphide protein 2; transposase, IS4 family protein 2432197 10816606 Flexsi_2270 Flexistipes sinusarabici DSM 4947 transposase, IS4 family protein YP_004604455.1 2431712 R 717231 CDS YP_004604456.1 336324489 10816607 complement(2432566..2432811) 1 NC_015672.1 TIGRFAM: small redox-active disulfide protein 2; COGs: COG0701 permease; InterPro IPR005524; KEGG: cni:Calni_0175 permease; PFAM: Protein of unknown function DUF318, transmembrane; SPTR: Permease; redox-active disulfide protein 2 2432811 10816607 Flexsi_2271 Flexistipes sinusarabici DSM 4947 redox-active disulfide protein 2 YP_004604456.1 2432566 R 717231 CDS YP_004604457.1 336324490 10816608 complement(2432881..2434047) 1 NC_015672.1 PFAM: Predicted permease; manually curated; hypothetical protein 2434047 10816608 Flexsi_2272 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604457.1 2432881 R 717231 CDS YP_004604458.1 336324491 10816610 complement(2435576..2435995) 1 NC_015672.1 PFAM: Low molecular weight phosphotyrosine protein phosphatase; TIGRFAM: arsenate reductase (thioredoxin); COGs: COG2041 Sulfite oxidase; InterPro IPR000572; KEGG: ddf:DEFDS_0498 hypothetical protein; PFAM: Oxidoreductase, molybdopterin binding; SPTR: Putative uncharacterized protein; protein tyrosine phosphatase 2435995 10816610 Flexsi_2274 Flexistipes sinusarabici DSM 4947 protein tyrosine phosphatase YP_004604458.1 2435576 R 717231 CDS YP_004604459.1 336324492 10816611 2436580..2437185 1 NC_015672.1 PFAM: Oxidoreductase molybdopterin binding domain; COGs: COG3153 acetyltransferase; InterPro IPR000182; KEGG: chl:Chy400_3399 GCN5-related N-acetyltransferase; PFAM: GCN5-related N-acetyltransferase; SPTR: Probable acetyltransferase; oxidoreductase molybdopterin binding protein 2437185 10816611 Flexsi_2275 Flexistipes sinusarabici DSM 4947 oxidoreductase molybdopterin binding protein YP_004604459.1 2436580 D 717231 CDS YP_004604460.1 336324493 10816612 complement(2437362..2437892) 1 NC_015672.1 PFAM: Acetyltransferase (GNAT) family; COGs: COG3467 flavin-nucleotide-binding protein; InterPro IPR011576; KEGG: geo:Geob_0985 pyridoxamine 5'-phosphate oxidase-related FMN-binding; PFAM: Pyridoxamine 5'-phosphate oxidase-like, FMN-binding domain; SPTR: Pyridoxamine 5'-phosphate oxidase-related FMN-binding; N-acetyltransferase GCN5 2437892 10816612 Flexsi_2276 Flexistipes sinusarabici DSM 4947 N-acetyltransferase GCN5 YP_004604460.1 2437362 R 717231 CDS YP_004604461.1 336324494 10816613 complement(2437962..2438420) 1 NC_015672.1 PFAM: Pyridoxamine 5'-phosphate oxidase; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR000524:IPR004839; KEGG: dap:Dacet_2893 transcriptional regulator, GntR family with aminotransferase domain; PFAM: HTH transcriptional regulator, GntR; Aminotransferase, class I/II; SMART: HTH transcriptional regulator, GntR; SPTR: Transcriptional regulator, GntR family with aminotransferase domain; pyridoxamine 5'-phosphate oxidase-like FMN-binding protein 2438420 10816613 Flexsi_2277 Flexistipes sinusarabici DSM 4947 pyridoxamine 5'-phosphate oxidase-like FMN-binding protein YP_004604461.1 2437962 R 717231 CDS YP_004604462.1 336324495 10816614 complement(2438438..2439856) 1 NC_015672.1 PFAM: Bacterial regulatory proteins, gntR family; Aminotransferase class I and II; This gene is disrupted by insertion of repetitive element; manually curated; GntR family transcriptional regulator 2439856 10816614 Flexsi_2278 Flexistipes sinusarabici DSM 4947 GntR family transcriptional regulator YP_004604462.1 2438438 R 717231 CDS YP_004604463.1 336324496 10816615 2440378..2440863 1 NC_015672.1 COGs: COG5421 Transposase; InterPro IPR002559; KEGG: msv:Mesil_3173 transposase IS4 family protein; PFAM: Transposase, IS4-like; SPTR: Transposase IS4 family protein; transposase, IS4 family protein 2440863 10816615 Flexsi_2280 Flexistipes sinusarabici DSM 4947 transposase, IS4 family protein YP_004604463.1 2440378 D 717231 CDS YP_004604464.1 336324497 10816616 2440950..2442053 1 NC_015672.1 PFAM: Transposase DDE domain; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: rpc:RPC_4479 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Short chain enoyl-CoA hydratase; transposase IS4 family protein 2442053 10816616 Flexsi_2281 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604464.1 2440950 D 717231 CDS YP_004604465.1 336324498 10816617 2443058..2443810 1 NC_015672.1 PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs; InterPro IPR004839; KEGG: pmo:Pmob_1584 GntR family transcriptional regulator; PFAM: Aminotransferase, class I/II; PRIAM: Aromatic-amino-acid transaminase; SPTR: Putative transcriptional regulator, GntR family; enoyl-CoA hydratase/isomerase 2443810 10816617 Flexsi_2282 Flexistipes sinusarabici DSM 4947 enoyl-CoA hydratase/isomerase YP_004604465.1 2443058 D 717231 CDS YP_004604466.1 336324499 10816618 2443803..2445050 1 NC_015672.1 PFAM: Aminotransferase class I and II; COGs: COG2318 conserved hypothetical protein; InterPro IPR007837; KEGG: mmw:Mmwyl1_1368 DinB family protein; PFAM: DinB; SPTR: DinB family protein; GntR family transcriptional regulator 2445050 10816618 Flexsi_2283 Flexistipes sinusarabici DSM 4947 GntR family transcriptional regulator YP_004604466.1 2443803 D 717231 CDS YP_004604467.1 336324500 10816619 2445001..2445519 1 NC_015672.1 PFAM: DinB family; InterPro IPR000620; KEGG: kse:Ksed_04860 membrane protein; PFAM: Protein of unknown function DUF6, transmembrane; SPTR: Integral membrane protein DUF6; DinB family protein 2445519 10816619 Flexsi_2284 Flexistipes sinusarabici DSM 4947 DinB family protein YP_004604467.1 2445001 D 717231 CDS YP_004604468.1 336324501 10816620 2445752..2446666 1 NC_015672.1 PFAM: EamA-like transporter family; COGs: COG2202 FOG: PAS/PAC domain; InterPro IPR000014:IPR013767:IPR013655:IPR001610; KEGG: dal:Dalk_3934 histidine kinase; PFAM: PAS fold; PAS fold-3; SMART: PAS; PAC motif; SPTR: Histidine kinase; TIGRFAM: PAS; hypothetical protein 2446666 10816620 Flexsi_2285 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604468.1 2445752 D 717231 CDS YP_004604469.1 336324502 10816621 2447002..2448789 1 NC_015672.1 PFAM: CHASE domain; PAS fold; TIGRFAM: PAS domain S-box; COGs: COG0642 Signal transduction histidine kinase; InterPro IPR003661:IPR003594; KEGG: pmx:PERMA_1548 sensor histidine kinase/response regulator; PFAM: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; SPTR: ATP-binding region, ATPase-like:Histidine kinase A-like; putative PAS/PAC sensor protein 2448789 10816621 Flexsi_2286 Flexistipes sinusarabici DSM 4947 putative PAS/PAC sensor protein YP_004604469.1 2447002 D 717231 CDS YP_004604470.1 336324503 10816622 2448838..2449818 1 NC_015672.1 PFAM: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG4968 Tfp pilus assembly protein PilE; InterPro IPR012902; KEGG: gme:Gmet_1399 N-terminal methylation; SPTR: N-terminal methylation; integral membrane sensor signal transduction histidine kinase 2449818 10816622 Flexsi_2287 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004604470.1 2448838 D 717231 CDS YP_004604471.1 336324504 10816623 2450281..2450493 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: general secretion pathway protein G; prepilin-type N-terminal cleavage/methylation domain; N-terminal methylation protein 2450493 10816623 Flexsi_2288 Flexistipes sinusarabici DSM 4947 N-terminal methylation protein YP_004604471.1 2450281 D 717231 CDS YP_004604472.1 336324505 10816624 2450462..2450848 1 NC_015672.1 InterPro IPR007016; KEGG: emi:Emin_1087 O-antigen polymerase; PFAM: O-antigen ligase-related; SPTR: O-antigen polymerase; hypothetical protein 2450848 10816624 Flexsi_2289 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604472.1 2450462 D 717231 CDS YP_004604473.1 336324506 10816625 2450864..2452693 1 NC_015672.1 PFAM: O-Antigen ligase; InterPro IPR012902; KEGG: gme:Gmet_1399 N-terminal methylation; SPTR: N-terminal methylation; O-antigen polymerase 2452693 10816625 Flexsi_2290 Flexistipes sinusarabici DSM 4947 O-antigen polymerase YP_004604473.1 2450864 D 717231 CDS YP_004604474.1 336324507 10816626 2452805..2453029 1 NC_015672.1 PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; hypothetical protein 2453029 10816626 Flexsi_2291 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604474.1 2452805 D 717231 CDS YP_004604475.1 336324508 10816627 2453275..2453898 1 NC_015672.1 hypothetical protein 2453898 10816627 Flexsi_2292 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604475.1 2453275 D 717231 CDS YP_004604476.1 336324509 10816629 2454826..2455464 1 NC_015672.1 PFAM: Ribulose-phosphate 3 epimerase family; TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: ddf:DEFDS_1297 hypothetical protein; SPTR: Putative uncharacterized protein; ribulose-phosphate 3-epimerase 2455464 10816629 Flexsi_2293 Flexistipes sinusarabici DSM 4947 ribulose-phosphate 3-epimerase YP_004604476.1 2454826 D 717231 CDS YP_004604477.1 336324510 10816630 complement(2455466..2455663) 1 NC_015672.1 manually curated; hypothetical protein 2455663 10816630 Flexsi_2294 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604477.1 2455466 R 717231 CDS YP_004604478.1 336324511 10816632 complement(2456565..2457884) 1 NC_015672.1 COGs: COG4623 soluble lytic transglycosylase fused to an ABC-type amino acid-binding protein; InterPro IPR001638:IPR008258; KEGG: dol:Dole_2596 putative transglycosylase; PFAM: Extracellular solute-binding protein, family 3; Lytic transglycosylase-like, catalytic; SMART: Extracellular solute-binding protein, family 3; SPTR: Membrane-bound lytic murein transglycosylase F; hypothetical protein 2457884 10816632 Flexsi_2296 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604478.1 2456565 R 717231 CDS YP_004604479.1 336324512 10816633 complement(2458284..2459648) 1 NC_015672.1 PFAM: Transglycosylase SLT domain; Bacterial extracellular solute-binding proteins, family 3; COGs: COG3547 Transposase and inactivated derivatives; InterPro IPR002525:IPR003346; KEGG: tye:THEYE_A0838 pilin inverting protein, putative; PFAM: Transposase, IS116/IS110/IS902; Transposase, IS111A/IS1328/IS1533; SPTR: Pilin inverting protein, putative; ABC transporter periplasmic subunit 2459648 10816633 Flexsi_2297 Flexistipes sinusarabici DSM 4947 ABC transporter periplasmic subunit YP_004604479.1 2458284 R 717231 CDS YP_004604480.1 336324513 10816634 complement(2460203..2461216) 1 NC_015672.1 PFAM: Transposase IS116/IS110/IS902 family; Transposase; COGs: COG0661 unusual protein kinase; InterPro IPR004147; KEGG: cni:Calni_1408 abc-1 domain-containing protein; PFAM: ABC-1; SPTR: ABC-1 domain-containing protein; transposase IS116/IS110/IS902 family protein 2461216 10816634 Flexsi_2298 Flexistipes sinusarabici DSM 4947 transposase IS116/IS110/IS902 family protein YP_004604480.1 2460203 R 717231 CDS YP_004604481.1 336324514 10816635 2461751..2463430 1 NC_015672.1 PFAM: ABC1 family; COGs: COG0595 hydrolase of the metallo-beta-lactamase superfamily; InterPro IPR011108; KEGG: ddf:DEFDS_0408 hypothetical protein; PFAM: RNA-metabolising metallo-beta-lactamase; SPTR: Putative uncharacterized protein; ABC-1 domain-containing protein 2463430 10816635 Flexsi_2299 Flexistipes sinusarabici DSM 4947 ABC-1 domain-containing protein YP_004604481.1 2461751 D 717231 CDS YP_004604482.1 336324515 10816636 2463430..2465058 1 NC_015672.1 PFAM: Metallo-beta-lactamase superfamily; RNA-metabolising metallo-beta-lactamase; TIGRFAM: conserved hypothetical protein; COGs: COG1968 Uncharacterized bacitracin resistance protein; HAMAP: Undecaprenyl-diphosphatase; InterPro IPR003824; KEGG: cni:Calni_1410 bacitracin resistance protein BacA; PFAM: Bacitracin resistance protein BacA; SPTR: Undecaprenyl-diphosphatase; RNA-metabolising metallo-beta-lactamase 2465058 10816636 Flexsi_2300 Flexistipes sinusarabici DSM 4947 RNA-metabolising metallo-beta-lactamase YP_004604482.1 2463430 D 717231 CDS YP_004604483.1 336324516 10816637 2465049..2465840 1 NC_015672.1 PFAM: Bacitracin resistance protein BacA; TIGRFAM: undecaprenyl-diphosphatase UppP; COGs: COG1674 DNA segregation ATPase FtsK/SpoIIIE and related protein; InterPro IPR002543:IPR018541:IPR003593; KEGG: dap:Dacet_2755 cell division FtsK/SpoIIIE; PFAM: Cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: ATPase, AAA+ type, core; SPTR: Cell division FtsK/SpoIIIE; undecaprenyl-diphosphatase 2465840 10816637 Flexsi_2301 Flexistipes sinusarabici DSM 4947 undecaprenyl-diphosphatase YP_004604483.1 2465049 D 717231 CDS YP_004604484.1 336324517 10816638 2465831..2467975 1 NC_015672.1 PFAM: Ftsk gamma domain; FtsK/SpoIIIE family; COGs: COG0167 Dihydroorotate dehydrogenase; InterPro IPR012135; KEGG: cni:Calni_0761 dihydroorotate oxidase; PFAM: Dihydroorotate dehydrogenase, class 1/ 2; SPTR: Dihydroorotate oxidase; cell division protein FtsK 2467975 10816638 Flexsi_2302 Flexistipes sinusarabici DSM 4947 cell division protein FtsK YP_004604484.1 2465831 D 717231 CDS YP_004604485.1 336324518 10816639 2467993..2468970 1 NC_015672.1 PFAM: Dihydroorotate dehydrogenase; COGs: COG1060 Thiamine biosynthesis protein ThiH; InterPro IPR020050:IPR007197; KEGG: ddf:DEFDS_0011 hypothetical protein; PFAM: Radical SAM; SPTR: Putative uncharacterized protein; TIGRFAM: menaquinone biosynthesis protein; FO synthase, subunit 2; dihydroorotate oxidase 2468970 10816639 Flexsi_2303 Flexistipes sinusarabici DSM 4947 dihydroorotate oxidase YP_004604485.1 2467993 D 717231 CDS YP_004604486.1 336324519 10816640 2469263..2470294 1 NC_015672.1 PFAM: Radical SAM superfamily; TIGRFAM: radical SAM domain protein, CofH subfamily; menaquinone biosynthesis protein, SCO4550 family; COGs: COG0178 Excinuclease ATPase subunit; HAMAP: UvrABC system protein A; InterPro IPR004602:IPR003439; KEGG: ddf:DEFDS_0014 excinuclease ABC subunit A; PFAM: ABC transporter-like; SPTR: Excinuclease ABC, A subunit; TIGRFAM: Excinuclease ABC, A subunit; menaquinone biosynthesis protein 2470294 10816640 Flexsi_2304 Flexistipes sinusarabici DSM 4947 menaquinone biosynthesis protein YP_004604486.1 2469263 D 717231 CDS YP_004604487.1 336324520 10816641 2470439..2473264 1 NC_015672.1 PFAM: ABC transporter; TIGRFAM: excinuclease ABC, A subunit; COGs: COG0860 N-acetylmuramoyl-L-alanine amidase; InterPro IPR002508; KEGG: ddf:DEFDS_0015 N-acetylmuramoyl-L-alanine amidase; PFAM: Cell wall hydrolase/autolysin, catalytic; SMART: Cell wall hydrolase/autolysin, catalytic; SPTR: N-acetylmuramoyl-L-alanine amidase; UvrABC system protein A 2473264 10816641 Flexsi_2305 Flexistipes sinusarabici DSM 4947 UvrABC system protein A YP_004604487.1 2470439 D 717231 CDS YP_004604488.1 336324521 10816642 2473245..2474960 1 NC_015672.1 PFAM: N-acetylmuramoyl-L-alanine amidase; Localisation of periplasmic protein complexes; InterPro IPR007452; KEGG: cni:Calni_2065 hypothetical protein; PFAM: Protein of unknown function DUF490; SPTR: Putative uncharacterized protein; cell wall hydrolase/autolysin 2474960 10816642 Flexsi_2306 Flexistipes sinusarabici DSM 4947 cell wall hydrolase/autolysin YP_004604488.1 2473245 D 717231 CDS YP_004604489.1 336324522 10816643 2474960..2478376 1 NC_015672.1 PFAM: Family of unknown function (DUF490); COGs: COG0729 Outer membrane protein; InterPro IPR010827:IPR000184; KEGG: cni:Calni_2066 surface antigen variable number repeat-containing protein; PFAM: Surface antigen variable number; Bacterial surface antigen (D15); SPTR: Surface antigen variable number repeat-containing protein; hypothetical protein 2478376 10816643 Flexsi_2307 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604489.1 2474960 D 717231 CDS YP_004604490.1 336324523 10816644 2478345..2480888 1 NC_015672.1 PFAM: Surface antigen variable number repeat; Surface antigen; COGs: COG0450 Peroxiredoxin; InterPro IPR000866:IPR019479; KEGG: ddf:DEFDS_0018 peroxiredoxin; PFAM: Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin, C-terminal; PRIAM: Peroxiredoxin; SPTR: Peroxiredoxin; surface antigen variable number repeat-containing protein 2480888 10816644 Flexsi_2308 Flexistipes sinusarabici DSM 4947 surface antigen variable number repeat-containing protein YP_004604490.1 2478345 D 717231 CDS YP_004604491.1 336324524 10816645 2481773..2482366 1 NC_015672.1 PFAM: C-terminal domain of 1-Cys peroxiredoxin; AhpC/TSA family; KEGG: ddf:DEFDS_2073 hypothetical protein; SPTR: Putative uncharacterized protein; peroxiredoxin 2482366 10816645 Flexsi_2309 Flexistipes sinusarabici DSM 4947 peroxiredoxin YP_004604491.1 2481773 D 717231 CDS YP_004604492.1 336324525 10816646 complement(2482592..2483308) 1 NC_015672.1 COGs: COG0365 Acyl-coenzyme A synthetase/AMP-(fatty) acid ligase; InterPro IPR000873; KEGG: ddf:DEFDS_2074 acetyl-CoA synthetase family protein; PFAM: AMP-dependent synthetase/ligase; PRIAM: Butyrate--CoA ligase; SPTR: Acetyl-CoA synthetase family protein; hypothetical protein 2483308 10816646 Flexsi_2310 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604492.1 2482592 R 717231 CDS YP_004604493.1 336324526 10816647 complement(2483468..2485102) 1 NC_015672.1 PFAM: AMP-binding enzyme; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ddf:DEFDS_2076 enoyl-CoA hydratase/isomerase family protein; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase family protein; butyrate--CoA ligase 2485102 10816647 Flexsi_2311 Flexistipes sinusarabici DSM 4947 butyrate--CoA ligase YP_004604493.1 2483468 R 717231 CDS YP_004604494.1 336324527 10816648 complement(2485112..2485753) 1 NC_015672.1 PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: dap:Dacet_2933 enoyl-CoA hydratase/isomerase; PFAM: Crotonase, core; SPTR: Enoyl-CoA hydratase/isomerase; enoyl-CoA hydratase/isomerase 2485753 10816648 Flexsi_2312 Flexistipes sinusarabici DSM 4947 enoyl-CoA hydratase/isomerase YP_004604494.1 2485112 R 717231 CDS YP_004604495.1 336324528 10816649 complement(2485761..2486561) 1 NC_015672.1 PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG0469 Pyruvate kinase; InterPro IPR001697:IPR015793:IPR015794; KEGG: pmx:PERMA_0022 pyruvate kinase; PFAM: Pyruvate kinase, barrel; Pyruvate kinase, alpha/beta; PRIAM: Pyruvate kinase; SPTR: Pyruvate kinase; TIGRFAM: Pyruvate kinase; enoyl-CoA hydratase/isomerase 2486561 10816649 Flexsi_2313 Flexistipes sinusarabici DSM 4947 enoyl-CoA hydratase/isomerase YP_004604495.1 2485761 R 717231 CDS YP_004604496.1 336324529 10816650 complement(2486646..2488148) 1 NC_015672.1 PFAM: Pyruvate kinase, barrel domain; Pyruvate kinase, alpha/beta domain; TIGRFAM: pyruvate kinase; COGs: COG1218 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase; InterPro IPR006240:IPR000760; KEGG: nhl:Nhal_2283 3'(2'),5'-bisphosphate nucleotidase; PFAM: Inositol monophosphatase; SPTR: 3'(2'),5'-bisphosphate nucleotidase; TIGRFAM: 3(2),5 -bisphosphate nucleotidase, bacterial; pyruvate kinase 2488148 10816650 Flexsi_2314 Flexistipes sinusarabici DSM 4947 pyruvate kinase YP_004604496.1 2486646 R 717231 CDS YP_004604497.1 336324530 10816651 2488396..2489205 1 NC_015672.1 PFAM: Inositol monophosphatase family; TIGRFAM: 3'(2'),5'-bisphosphate nucleotidase, bacterial; InterPro IPR002559; KEGG: pop:POPTR_597343 hypothetical protein; PFAM: Transposase, IS4-like; SPTR: Transposase, IS4 family protein; 3'(2'),5'-bisphosphate nucleotidase 2489205 10816651 Flexsi_2315 Flexistipes sinusarabici DSM 4947 3'(2'),5'-bisphosphate nucleotidase YP_004604497.1 2488396 D 717231 CDS YP_004604498.1 336324531 10816652 2489599..2490918 1 NC_015672.1 PFAM: Transposase DDE domain; KEGG: ddf:DEFDS_0045 hypothetical protein; SPTR: Putative uncharacterized protein; transposase IS4 family protein 2490918 10816652 Flexsi_2316 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604498.1 2489599 D 717231 CDS YP_004604499.1 336324532 10816653 2491220..2492131 1 NC_015672.1 PFAM: Phosphate-starvation-inducible E; COGs: COG0653 Preprotein translocase subunit SecA (ATPase RNA helicase); HAMAP: Protein translocase subunit secA; InterProIPR000185:IPR011115:IPR011130:IPR001650:IPR 011116:IPR004027; KEGG: ddf:DEFDS_0046 preprotein translocase subunit A; PFAM: SecA DEAD-like; SecA preprotein cross-linking region; DNA/RNA helicase, C-terminal; SecA Wing/Scaffold; SEC-C motif; SMART: DNA/RNA helicase, C-terminal; SPTR: Protein translocase subunit secA; TIGRFAM: SecA protein; hypothetical protein 2492131 10816653 Flexsi_2317 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604499.1 2491220 D 717231 CDS YP_004604500.1 336324533 10816654 2492128..2494710 1 NC_015672.1 PFAM: SecA DEAD-like domain; SecA preprotein cross-linking domain; SEC-C motif; SecA Wing and Scaffold domain; TIGRFAM: preprotein translocase, SecA subunit; This gene is disrupted by insertion of repetitive element; manually curated; protein translocase subunit secA 2494710 10816654 Flexsi_2318 Flexistipes sinusarabici DSM 4947 protein translocase subunit secA YP_004604500.1 2492128 D 717231 CDS YP_004604501.1 336324534 10816656 2495096..2496145 1 NC_015672.1 PFAM: Transposase DDE domain; Transposase domain (DUF772); COGs: COG0598 Mg2+ and Co2+ transporter; InterPro IPR004488:IPR002523; KEGG: pca:Pcar_2713 magnesium and cobalt transport protein CorA; PFAM: Mg2+ transporter protein, CorA-like; SPTR: Magnesium and cobalt transport protein CorA; TIGRFAM: Magnesium/cobalt transport protein CorA; transposase IS4 family protein 2496145 10816656 Flexsi_2320 Flexistipes sinusarabici DSM 4947 transposase IS4 family protein YP_004604501.1 2495096 D 717231 CDS YP_004604502.1 336324535 10816657 complement(2496644..2497723) 1 NC_015672.1 PFAM: CorA-like Mg2+ transporter protein; TIGRFAM: magnesium Mg(2+) and cobalt Co(2+) transport protein (corA); manually curated; magnesium and cobalt transport protein CorA 2497723 10816657 Flexsi_2321 Flexistipes sinusarabici DSM 4947 magnesium and cobalt transport protein CorA YP_004604502.1 2496644 R 717231 CDS YP_004604503.1 336324536 10816659 complement(2498359..2499819) 1 NC_015672.1 PFAM: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase; TIGRFAM: UbiD family decarboxylases; menaquinone biosynthesis decarboxylase, SCO4490 family; COGs: COG2226 Methylase involved in ubiquinone/menaquinone biosynthesis; HAMAP: UbiE/COQ5 methyltransferase; InterPro IPR004033; KEGG: ddf:DEFDS_1643 ubiquinone/menaquinone biosynthesis methyltransferase; PFAM: UbiE/COQ5 methyltransferase; SPTR: Menaquinone biosynthesis methyltransferase ubiE; TIGRFAM: UbiE/COQ5 methyltransferase; menaquinone biosynthesis decarboxylase 2499819 10816659 Flexsi_2323 Flexistipes sinusarabici DSM 4947 menaquinone biosynthesis decarboxylase YP_004604503.1 2498359 R 717231 CDS YP_004604504.1 336324537 10816660 complement(2499855..2500535) 1 NC_015672.1 PFAM: ubiE/COQ5 methyltransferase family; TIGRFAM: ubiquinone/menaquinone biosynthesis methyltransferases; KEGG: ddf:DEFDS_1646 hypothetical protein; SPTR: Putative uncharacterized protein; ubiquinone/menaquinone biosynthesis methyltransferase ubiE 2500535 10816660 Flexsi_2324 Flexistipes sinusarabici DSM 4947 ubiquinone/menaquinone biosynthesis methyltransferase ubiE YP_004604504.1 2499855 R 717231 CDS YP_004604505.1 336324538 10816661 complement(2500648..2501016) 1 NC_015672.1 COGs: COG1011 hydrolase (HAD superfamily); InterPro IPR010237:IPR006402:IPR005834; KEGG: ddf:DEFDS_1650 pyrimidine 5'-nucleotidase; PFAM: Haloacid dehalogenase-like hydrolase; SPTR: Pyrimidine 5'-nucleotidase; TIGRFAM: Pyrimidine 5-nucleotidase; HAD-superfamily hydrolase, subfamily IA, variant 3; hypothetical protein 2501016 10816661 Flexsi_2325 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604505.1 2500648 R 717231 CDS YP_004604506.1 336324539 10816662 complement(2501037..2501675) 1 NC_015672.1 TIGRFAM: haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED; pyrimidine 5'-nucleotidase; COGs: COG0537 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolase; InterPro IPR001310; KEGG: ddf:DEFDS_1906 histidine triad family protein; PFAM: Histidine triad (HIT) protein; SPTR: Histidine triad family protein; pyrimidine 5'-nucleotidase 2501675 10816662 Flexsi_2326 Flexistipes sinusarabici DSM 4947 pyrimidine 5'-nucleotidase YP_004604506.1 2501037 R 717231 CDS YP_004604507.1 336324540 10816663 2501752..2502168 1 NC_015672.1 PFAM: HIT domain; COGs: COG0459 Chaperonin GroEL (HSP60 family); HAMAP: 60 kDa chaperonin; InterPro IPR001844:IPR002423; KEGG: ddf:DEFDS_0240 chaperonin GroEL; PFAM: Chaperonin Cpn60/TCP-1; SPTR: 60 kDa chaperonin; TIGRFAM: Chaperonin Cpn60; histidine triad (HIT) protein 2502168 10816663 Flexsi_2327 Flexistipes sinusarabici DSM 4947 histidine triad (HIT) protein YP_004604507.1 2501752 D 717231 CDS YP_004604508.1 336324541 10816664 complement(2502247..2503896) 1 NC_015672.1 PFAM: TCP-1/cpn60 chaperonin family; TIGRFAM: chaperonin GroL; COGs: COG0234 Co-chaperonin GroES (HSP10); HAMAP: Chaperonin Cpn10, subgroup; InterPro IPR001476:IPR020818; KEGG: cni:Calni_2033 chaperonin cpn10; PFAM: Chaperonin Cpn10; SPTR: 10 kDa chaperonin; 60 kDa chaperonin 2503896 10816664 Flexsi_2328 Flexistipes sinusarabici DSM 4947 60 kDa chaperonin YP_004604508.1 2502247 R 717231 CDS YP_004604509.1 336324542 10816665 complement(2503911..2504201) 1 NC_015672.1 PFAM: Chaperonin 10 Kd subunit; COGs: COG0065 3-isopropylmalate dehydratase large subunit; HAMAP: 3-isopropylmalate dehydratase, large subunit region; InterPro IPR004430:IPR001030; KEGG: cni:Calni_2034 3-isopropylmalate dehydratase, large subunit; PFAM: Aconitase/3-isopropylmalate dehydratase large subunit, alpha/beta/alpha; SPTR: 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit region; 10 kDa chaperonin 2504201 10816665 Flexsi_2329 Flexistipes sinusarabici DSM 4947 10 kDa chaperonin YP_004604509.1 2503911 R 717231 CDS YP_004604510.1 336324543 10816666 2504429..2505817 1 NC_015672.1 PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; COGs: COG0066 3-isopropylmalate dehydratase small subunit; InterPro IPR004431:IPR000573; KEGG: cni:Calni_2035 3-isopropylmalate dehydratase, small subunit; PFAM: Aconitase A/isopropylmalate dehydratase small subunit, swivel; SPTR: 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit region; 3-isopropylmalate dehydratase large subunit 2505817 10816666 Flexsi_2330 Flexistipes sinusarabici DSM 4947 3-isopropylmalate dehydratase large subunit YP_004604510.1 2504429 D 717231 CDS YP_004604511.1 336324544 10816667 2505829..2506434 1 NC_015672.1 PFAM: Aconitase C-terminal domain; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; COGs: COG4666 TRAP-type uncharacterized transport system fused permease components; InterPro IPR011853:IPR010656; KEGG: cni:Calni_0389 trap transporter, 4tm/12tm fusion protein; PFAM: TRAP C4-dicarboxylate transport system permease DctM subunit; SPTR: TRAP transporter, 4TM/12TM fusion protein; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; 3-isopropylmalate dehydratase small subunit 2506434 10816667 Flexsi_2331 Flexistipes sinusarabici DSM 4947 3-isopropylmalate dehydratase small subunit YP_004604511.1 2505829 D 717231 CDS YP_004604512.1 336324545 10816668 complement(2506449..2508494) 1 NC_015672.1 PFAM: DctM-like transporters; TIGRFAM: TRAP transporter, 4TM/12TM fusion protein; COGs: COG2358 TRAP-type uncharacterized transport system periplasmic component; InterPro IPR011852; KEGG: ddf:DEFDS_1400 TRAP-type transporter substrate-binding protein; SPTR: TRAP-type transport system, substrate-binding protein; TIGRFAM: TRAP transporter solute receptor, TAXI family; TRAP transporter, 4TM/12TM fusion protein 2508494 10816668 Flexsi_2332 Flexistipes sinusarabici DSM 4947 TRAP transporter, 4TM/12TM fusion protein YP_004604512.1 2506449 R 717231 CDS YP_004604513.1 336324546 10816669 complement(2508585..2509586) 1 NC_015672.1 TIGRFAM: TRAP transporter solute receptor, TAXI family; COGs: COG2984 ABC-type uncharacterized transport system periplasmic component; KEGG: ddf:DEFDS_1401 hypothetical protein; SPTR: Putative uncharacterized protein; TRAP transporter solute receptor, TAXI family 2509586 10816669 Flexsi_2333 Flexistipes sinusarabici DSM 4947 TRAP transporter solute receptor, TAXI family YP_004604513.1 2508585 R 717231 CDS YP_004604514.1 336324547 10816670 complement(2509795..2510709) 1 NC_015672.1 PFAM: ABC transporter substrate binding protein; COGs: COG2204 Response regulator containing CheY-like receiver AAA-type ATPase and DNA-binding domains; InterPro IPR001789:IPR002078:IPR002197:IPR003593; KEGG: ddf:DEFDS_1402 two-component system, NtrC family, response regulator; PFAM: RNA polymerase sigma factor 54, interaction; Signal transduction response regulator, receiver region; Helix-turn-helix, Fis-type; SMART: Signal transduction response regulator, receiver region; ATPase, AAA+ type, core; SPTR: Two-component system, NtrC family, response regulator; hypothetical protein 2510709 10816670 Flexsi_2334 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604514.1 2509795 R 717231 CDS YP_004604515.1 336324548 10816671 complement(2510706..2512082) 1 NC_015672.1 PFAM: Response regulator receiver domain; Bacterial regulatory protein, Fis family; Sigma-54 interaction domain; COGs: COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system; InterPro IPR003660:IPR003661:IPR003594; KEGG: ddf:DEFDS_1403 hypothetical protein; PFAM: ATP-binding region, ATPase-like; HAMP linker domain; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; SMART: ATP-binding region, ATPase-like; Signal transduction histidine kinase, subgroup 1, dimerisation/phosphoacceptor region; HAMP linker domain; SPTR: Putative uncharacterized protein; Fis family two component sigma-54 specific transcriptional regulator 2512082 10816671 Flexsi_2335 Flexistipes sinusarabici DSM 4947 Fis family two component sigma-54 specific transcriptional regulator YP_004604515.1 2510706 R 717231 CDS YP_004604516.1 336324549 10816672 complement(2512069..2513790) 1 NC_015672.1 PFAM: HAMP domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; His Kinase A (phosphoacceptor) domain; COGs: COG0591 Na+/proline symporter; InterPro IPR001734; KEGG: ddf:DEFDS_1547 solute:sodium symporter; PFAM: Sodium/solute symporter; SPTR: Solute:sodium symporter; integral membrane sensor signal transduction histidine kinase 2513790 10816672 Flexsi_2336 Flexistipes sinusarabici DSM 4947 integral membrane sensor signal transduction histidine kinase YP_004604516.1 2512069 R 717231 CDS YP_004604517.1 336324550 10816673 2513885..2515162 1 NC_015672.1 PFAM: Sodium:solute symporter family; COGs: COG0057 Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase; InterPro IPR006424:IPR020828:IPR020829; KEGG: gbm:Gbem_3789 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain; PRIAM: Glyceraldehyde-3-phosphate dehydrogenase (phosphorylating); SPTR: Glyceraldehyde-3-phosphate dehydrogenase, type I; TIGRFAM: Glyceraldehyde-3-phosphate dehydrogenase, type I; Na+/solute symporter 2515162 10816673 Flexsi_2337 Flexistipes sinusarabici DSM 4947 Na+/solute symporter YP_004604517.1 2513885 D 717231 CDS YP_004604518.1 336324551 10816674 complement(2515239..2516684) 1 NC_015672.1 PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; COGs: COG0004 Ammonia permease; InterPro IPR019879:IPR001905; KEGG: hel:HELO_1099 ammonium transporter; PFAM: Ammonium transporter; SPTR: Ammonium transporter; TIGRFAM: Probable ammonium transporter, marine subtype; Ammonium transporter; glyceraldehyde-3-phosphate dehydrogenase, type I 2516684 10816674 Flexsi_2338 Flexistipes sinusarabici DSM 4947 glyceraldehyde-3-phosphate dehydrogenase, type I YP_004604518.1 2515239 R 717231 CDS YP_004604519.1 336324552 10816675 complement(2516885..2518138) 1 NC_015672.1 PFAM: Ammonium Transporter Family; TIGRFAM: probable ammonium transporter, marine subtype; ammonium transporter; COGs: COG0347 Nitrogen regulatory protein PII; InterPro IPR002187; KEGG: geo:Geob_1818 nitrogen regulatory protein P-II; PFAM: Nitrogen regulatory protein PII; SPTR: Nitrogen regulatory protein P-II; ammonium transporter 2518138 10816675 Flexsi_2339 Flexistipes sinusarabici DSM 4947 ammonium transporter YP_004604519.1 2516885 R 717231 CDS YP_004604520.1 336324553 10816676 complement(2518142..2518501) 1 NC_015672.1 PFAM: Nitrogen regulatory protein P-II; nitrogen regulatory protein P-II 2518501 10816676 Flexsi_2340 Flexistipes sinusarabici DSM 4947 nitrogen regulatory protein P-II YP_004604520.1 2518142 R 717231 CDS YP_004604521.1 336324554 10816677 2519009..2519242 1 NC_015672.1 COGs: COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain; HAMAP: Chaperone protein dnaJ; InterPro IPR012724:IPR001623:IPR001305:IPR002939; KEGG: cni:Calni_0253 chaperone protein DnaJ; PFAM: Chaperone DnaJ, C-terminal; Heat shock protein DnaJ, N-terminal; Heat shock protein DnaJ, cysteine-rich region; SMART: Heat shock protein DnaJ, N-terminal; SPTR: Chaperone protein dnaJ 2; TIGRFAM: Chaperone DnaJ; hypothetical protein 2519242 10816677 Flexsi_2341 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604521.1 2519009 D 717231 CDS YP_004604522.1 336324555 10816678 complement(2519392..2520528) 1 NC_015672.1 PFAM: DnaJ C terminal region; DnaJ central domain (4 repeats); DnaJ domain; TIGRFAM: chaperone protein DnaJ; COGs: COG0443 Molecular chaperone; HAMAP: Chaperone DnaK; InterPro IPR012725:IPR013126; KEGG: ddf:DEFDS_2114 molecular chaperone DnaK; PFAM: Heat shock protein 70; SPTR: Chaperone protein dnaK; TIGRFAM: Chaperone DnaK; chaperone protein dnaJ 2520528 10816678 Flexsi_2342 Flexistipes sinusarabici DSM 4947 chaperone protein dnaJ YP_004604522.1 2519392 R 717231 CDS YP_004604523.1 336324556 10816679 complement(2520750..2522711) 1 NC_015672.1 PFAM: Hsp70 protein; TIGRFAM: chaperone protein DnaK; Fe-S protein assembly chaperone HscA; COGs: COG0576 Molecular chaperone GrpE (heat shock protein); HAMAP: GrpE nucleotide exchange factor; InterPro IPR000740; KEGG: ddf:DEFDS_2115 molecular chaperone GrpE; PFAM: GrpE nucleotide exchange factor; SPTR: Protein grpE; chaperone protein dnaK 2522711 10816679 Flexsi_2343 Flexistipes sinusarabici DSM 4947 chaperone protein dnaK YP_004604523.1 2520750 R 717231 CDS YP_004604524.1 336324557 10816680 complement(2522704..2523354) 1 NC_015672.1 PFAM: GrpE; COGs: COG1420 Transcriptional regulator of heat shock gene; HAMAP: Negative regulator of class I heat shock protein; InterPro IPR002571; KEGG: cni:Calni_0250 heat-inducible transcription repressor HrcA; PFAM: Negative regulator of class I heat shock protein; SPTR: Heat-inducible transcription repressor hrcA; TIGRFAM: Negative regulator of class I heat shock protein; protein grpE 2523354 10816680 Flexsi_2344 Flexistipes sinusarabici DSM 4947 protein grpE YP_004604524.1 2522704 R 717231 CDS YP_004604525.1 336324558 10816681 complement(2523344..2524393) 1 NC_015672.1 PFAM: HrcA protein C terminal domain; TIGRFAM: heat shock gene repressor HrcA; COGs: COG1801 conserved hypothetical protein; InterPro IPR002763; KEGG: ddf:DEFDS_2013 hypothetical protein; PFAM: Protein of unknown function DUF72; SPTR: Putative uncharacterized protein; heat-inducible transcription repressor HrcA 2524393 10816681 Flexsi_2345 Flexistipes sinusarabici DSM 4947 heat-inducible transcription repressor HrcA YP_004604525.1 2523344 R 717231 CDS YP_004604526.1 336324559 10816682 complement(2524665..2525453) 1 NC_015672.1 PFAM: Protein of unknown function DUF72; KEGG: mfv:Mfer_0339 smc domain protein; hypothetical protein 2525453 10816682 Flexsi_2346 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604526.1 2524665 R 717231 CDS YP_004604527.1 336324560 10816683 2525595..2526242 1 NC_015672.1 Signal predicted by SignalP 3.0 HMM; IMG reference gene:2505696881_SP; hypothetical protein 2526242 10816683 Flexsi_2347 Flexistipes sinusarabici DSM 4947 hypothetical protein YP_004604527.1 2525595 D 717231 CDS