-- dump date 20240506_000012 -- class Genbank::Contig -- table contig_comment -- id comment NC_013849.1 REFSEQ INFORMATION: The reference sequence is identical toREFSEQ INFORMATION: The reference sequence is identical to CP001899.1.REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.govREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek LovleyREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGFREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANLREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps withREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. EachREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total errorREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000.REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for theREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by theREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data toREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of thisREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborativeREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis.REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376).REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome AnnotationREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here:REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START##REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeqREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic GenomeREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference proteinREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNAREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END##REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START##REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system atREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano ItalyREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu)REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: ItalyREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: AnaerobeREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shapedREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: MotileREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: HyperthermophileREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85CREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7 Gram Staining :: gram-REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free livingREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: NoneREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water, Hydrothermal ventREFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water, Hydrothermal vent ##Metadata-END##REFSEQ INFORMATION: The reference sequence is identical to CP001899.1. URL -- http://www.jgi.doe.gov JGI Project ID: 4085699 Source DNA and bacteria available from Derek Lovley (dlovley@microbio.umass.edu) Contacts: Iain Anderson (IJAnderson@lbl.gov) Tanja Woyke (microbe@cuba.jgi-psf.org) Annotation done by JGI-ORNL and JGI-PGF Finishing done by JGI-LANL Finished microbial genomes have been curated to close all gaps with greater than 98% coverage of at least two independent clones. Each base pair has a minimum q (quality) value of 30 and the total error rate is less than one per 50000. The JGI and collaborators endorse the principles for the distribution and use of large scale sequencing data adopted by the larger genome sequencing community and urge users of this data to follow them. it is our intention to publish the work of this project in a timely fashion and we welcome collaborative interaction on the project and analysis. (http://www.genome.gov/page.cfm?pageID=10506376). The annotation was added by the NCBI Prokaryotic Genome Annotation Pipeline (PGAP). Information about PGAP can be found here: https://www.ncbi.nlm.nih.gov/genome/annotation_prok/ ##Genome-Annotation-Data-START## Annotation Provider :: NCBI RefSeq Annotation Name :: GCF_000025505.1-RS_2024_04_23 Annotation Date :: 04/23/2024 00:42:14 Annotation Pipeline :: NCBI Prokaryotic Genome Annotation Pipeline (PGAP) Annotation Method :: Best-placed reference protein set; GeneMarkS-2+ Annotation Software revision :: 6.7 Features Annotated :: Gene; CDS; rRNA; tRNA; ncRNA Genes (total) :: 2,616 CDSs (total) :: 2,562 Genes (coding) :: 2,551 CDSs (with protein) :: 2,551 Genes (RNA) :: 54 rRNAs :: 1, 1, 1 (5S, 16S, 23S) complete rRNAs :: 1, 1, 1 (5S, 16S, 23S) tRNAs :: 49 ncRNAs :: 2 Pseudo Genes (total) :: 11 CDSs (without protein) :: 11 Pseudo Genes (ambiguous residues) :: 0 of 11 Pseudo Genes (frameshifted) :: 4 of 11 Pseudo Genes (incomplete) :: 7 of 11 Pseudo Genes (internal stop) :: 3 of 11 Pseudo Genes (multiple problems) :: 2 of 11 CRISPR Arrays :: 1 ##Genome-Annotation-Data-END## ##Metadata-START## Organism Display Name :: Ferroglobus placidus AEDII12DO, DSM 10642 Culture Collection ID :: DSM 10642 GOLD Stamp ID :: Gi01752 Greengenes ID :: 53724 Funding Program :: DOE-LSP 2007 Isolation Site :: Hallow submarine hydrothermal system at Vulcano Italy Source of Isolate :: Derek Lovley (dlovley@microbio.umass.edu) Isolation Country :: Italy Oxygen Requirement :: Anaerobe Cell Shape :: Coccus-shaped Motility :: Motile Temperature Range :: Hyperthermophile Temperature Optimum :: 85C pH :: 7 Gram Staining :: gram- Biotic Relationship :: Free living Diseases :: None Habitat :: Fresh water, Hydrothermal vent ##Metadata-END## COMPLETENESS: full length.