-- dump date 20140619_091642 -- class Genbank::CDS -- table cds_note -- id note YP_004090323.1 TIGRFAM: chromosomal replication initiator protein DnaA; PFAM: Chromosomal replication initiator DnaA; Chromosomal replication initiator DnaA domain; KEGG: cbl:CLK_3133 chromosomal replication initiation protein; SMART: Chromosomal replication initiator DnaA domain; AAA ATPase YP_004090324.1 SMART: DNA polymerase III beta chain; TIGRFAM: DNA polymerase III, beta subunit; KEGG: ctc:CTC00093 DNA polymerase III subunit beta; PFAM: DNA polymerase III beta chain YP_004090325.1 PFAM: RNA-binding S4 domain protein; KEGG: cyb:CYB_1892 S4 domain-containing protein YP_004090326.1 KEGG: cth:Cthe_2374 DNA replication and repair protein RecF; TIGRFAM: DNA replication and repair protein RecF; PFAM: SMC domain protein YP_004090327.1 KEGG: cce:Ccel_0005 hypothetical protein YP_004090328.1 SMART: DNA topoisomerase II; ATP-binding region ATPase domain protein; TIGRFAM: DNA gyrase, B subunit; KEGG: cce:Ccel_0006 DNA gyrase, B subunit; PFAM: DNA topoisomerase type IIA subunit B region 2 domain protein; ATP-binding region ATPase domain protein; TOPRIM domain-containing protein; DNA gyrase subunit B domain protein YP_004090329.1 SMART: DNA gyrase/topoisomerase IV subunit A; TIGRFAM: DNA gyrase, A subunit; KEGG: cno:NT01CX_0861 DNA gyrase subunit A; PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller YP_004090330.1 KEGG: geo:Geob_0432 hypothetical protein YP_004090331.1 KEGG: geo:Geob_0432 hypothetical protein YP_004090332.1 KEGG: acd:AOLE_18415 lyzozyme M1 (1,4-beta-N-acetylmuramidase); PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup YP_004090333.1 KEGG: vpr:Vpar_1625 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004090334.1 KEGG: cby:CLM_0752 drug resistance transporter, EmrB/QacA family; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004090335.1 KEGG: drm:Dred_1680 bifunctional pyrimidine regulatory protein PyrR uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004090336.1 KEGG: gsu:GSU1272 dihydroorotase, multifunctional complex type; TIGRFAM: dihydroorotase, multifunctional complex type; PFAM: amidohydrolase YP_004090337.1 TIGRFAM: orotidine 5'-phosphate decarboxylase; KEGG: cpy:Cphy_0882 orotidine 5'-phosphate decarboxylase; PFAM: Orotidine 5'-phosphate decarboxylase YP_004090338.1 KEGG: cth:Cthe_0950 carbamoyl-phosphate synthase small subunit; TIGRFAM: carbamoyl-phosphate synthase, small subunit; PFAM: Carbamoyl-phosphate synthase small chain; glutamine amidotransferase class-I YP_004090339.1 KEGG: cth:Cthe_0949 carbamoyl phosphate synthase large subunit; TIGRFAM: carbamoyl-phosphate synthase, large subunit; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; Carbamoyl-phosphate synthetase large chain oligomerisation; MGS domain protein YP_004090340.1 PFAM: Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; KEGG: amt:Amet_4209 oxidoreductase FAD/NAD(P)-binding subunit YP_004090341.1 KEGG: cce:Ccel_0618 dihydroorotate dehydrogenase family protein; TIGRFAM: dihydroorotate dehydrogenase family protein; PFAM: dihydroorotate oxidase YP_004090342.1 PFAM: Phosphoglycerate mutase; KEGG: csc:Csac_1937 phosphoglycerate mutase YP_004090343.1 KEGG: bse:Bsel_2440 Holliday junction resolvase YqgF; PFAM: Holliday junction resolvase YqgF; SMART: Resolvase RNase H domain protein fold YP_004090344.1 KEGG: hmo:HM1_1033 nol1/nop2/sun family putative RNA methylase; TIGRFAM: RNA methylase, NOL1/NOP2/sun family; PFAM: Fmu (Sun) domain protein YP_004090345.1 KEGG: cbe:Cbei_2184 diguanylate phosphodiesterase; PFAM: EAL domain protein; Metal-dependent hydrolase HDOD; SMART: EAL domain protein YP_004090346.1 PFAM: protein of unknown function DUF28; KEGG: cce:Ccel_0181 hypothetical protein YP_004090347.1 KEGG: tmt:Tmath_0367 Putitive phosphate transport regulator YP_004090348.1 PFAM: phosphate transporter; KEGG: dar:Daro_0679 phosphate transporter YP_004090349.1 PFAM: protein of unknown function DUF208; KEGG: cbe:Cbei_1289 hypothetical protein YP_004090350.1 KEGG: dae:Dtox_1670 phosphomethylpyrimidine kinase; TIGRFAM: phosphomethylpyrimidine kinase; PFAM: Phosphomethylpyrimidine kinase type-1 YP_004090351.1 PFAM: regulatory protein TetR; KEGG: cbe:Cbei_0259 TetR family transcriptional regulator YP_004090352.1 PFAM: protein of unknown function DUF45; KEGG: har:HEAR0371 hypothetical protein YP_004090353.1 PFAM: hydrogenase large subunit domain protein; KEGG: dhd:Dhaf_0813 hydrogenase large subunit domain protein YP_004090354.1 TIGRFAM: phosphoserine aminotransferase; KEGG: cpy:Cphy_3383 phosphoserine aminotransferase; PFAM: aminotransferase class V YP_004090355.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; amino acid-binding ACT domain protein; KEGG: cth:Cthe_3035 D-3-phosphoglycerate dehydrogenase YP_004090356.1 KEGG: clj:CLJU_c06140 hypothetical protein YP_004090357.1 KEGG: amt:Amet_4521 hypothetical protein YP_004090358.1 KEGG: cth:Cthe_0085 negative regulator of genetic competence YP_004090359.1 TIGRFAM: ribulose-phosphate 3-epimerase; KEGG: dau:Daud_1586 ribulose-phosphate 3-epimerase; PFAM: ribulose-phosphate 3-epimerase YP_004090360.1 PFAM: aldo/keto reductase; KEGG: dat:HRM2_04090 putative aldo/keto reductase YP_004090361.1 PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; KEGG: rmr:Rmar_1306 L-aspartate oxidase YP_004090362.1 TIGRFAM: nicotinate-nucleotide pyrophosphorylase; KEGG: cth:Cthe_2354 nicotinate-nucleotide pyrophosphorylase [carboxylating]; PFAM: Quinolinate phosphoribosyl transferase YP_004090363.1 KEGG: mac:MA1513 hypothetical protein; PFAM: peptidase C1A papain; SMART: peptidase C1A papain YP_004090364.1 KEGG: cno:NT01CX_1735 hypothetical protein YP_004090365.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: GGDEF domain containing protein; PAS fold domain protein; KEGG: dhd:Dhaf_2264 diguanylate cyclase and metal dependent phosphohydrolase; SMART: GGDEF domain containing protein; PAS domain containing protein YP_004090366.1 KEGG: esi:Exig_2318 hypothetical protein YP_004090367.1 PFAM: DNA polymerase beta domain protein region; KEGG: ote:Oter_2169 DNA polymerase beta subunit YP_004090368.1 KEGG: tpd:Teth39_0245 small GTP-binding protein; TIGRFAM: small GTP-binding protein; PFAM: GTP-binding protein HSR1-related YP_004090369.1 PFAM: Cupin 2 conserved barrel domain protein; KEGG: str:Sterm_1331 cupin 2 conserved barrel domain protein YP_004090370.1 PFAM: fumarate lyase; Fumarase C-like; KEGG: tpd:Teth39_0244 aspartate ammonia-lyase YP_004090371.1 KEGG: ere:EUBREC_0234 biotin synthase; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004090372.1 PFAM: DHHA2 domain protein; CBS domain containing protein; KEGG: mta:Moth_2414 putative manganese-dependent inorganic pyrophosphatase; SMART: CBS domain containing protein YP_004090373.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: brm:Bmur_1385 iron-containing alcohol dehydrogenase YP_004090374.1 KEGG: cce:Ccel_2300 putative PAS/PAC sensor protein; PFAM: Fe-S cluster domain protein; SMART: PAS domain containing protein YP_004090375.1 KEGG: cce:Ccel_2299 protein serine/threonine phosphatase YP_004090376.1 PFAM: transposase IS605 OrfB; KEGG: cce:Ccel_2298 transposase IS605 OrfB YP_004090377.1 KEGG: dhd:Dhaf_0513 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004090378.1 PFAM: protein of unknown function DUF214; KEGG: tjr:TherJR_2632 protein of unknown function DUF214 YP_004090379.1 KEGG: tit:Thit_0218 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090380.1 PFAM: biotin/lipoyl attachment domain-containing protein; KEGG: gct:GC56T3_2852 biotin/lipoyl attachment domain-containing protein YP_004090381.1 KEGG: mex:Mext_4477 molybdenum ABC transporter, periplasmic molybdate-binding protein YP_004090382.1 KEGG: ere:EUBREC_0699 putative lipid kinase; PFAM: diacylglycerol kinase catalytic region; SMART: diacylglycerol kinase catalytic region YP_004090383.1 KEGG: ckr:CKR_2284 hypothetical protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004090384.1 KEGG: cpi:Cpin_0806 protein of unknown function DUF88 YP_004090385.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; KEGG: slp:Slip_1139 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: EAL domain protein; GGDEF domain containing protein YP_004090386.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; GAF domain protein; KEGG: slp:Slip_1139 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: EAL domain protein; GGDEF domain containing protein; GAF domain protein YP_004090387.1 TIGRFAM: 3-methyl-2-oxobutanoate hydroxymethyltransferase; KEGG: cbe:Cbei_2610 3-methyl-2-oxobutanoate hydroxymethyltransferase; PFAM: Ketopantoate hydroxymethyltransferase YP_004090388.1 KEGG: hmo:HM1_0668 pantoate--beta-alanine ligase; TIGRFAM: pantoate/beta-alanine ligase; PFAM: Pantoate-beta-alanine ligase YP_004090389.1 KEGG: cpo:COPRO5265_0171 HymD protein YP_004090390.1 KEGG: aoe:Clos_1264 hypothetical protein YP_004090391.1 PFAM: protein of unknown function DUF955; KEGG: clj:CLJU_c31730 hypothetical protein YP_004090392.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: efa:EF2852 Cro/CI family transcriptional regulator; SMART: helix-turn-helix domain protein YP_004090394.1 KEGG: ppe:PEPE_1019 hypothetical protein YP_004090395.1 KEGG: amt:Amet_2601 IstB ATP binding domain-containing protein YP_004090396.1 PFAM: transposase-like Mu ; Integrase catalytic region; KEGG: dae:Dtox_4214 transposase-like Mu YP_004090397.1 KEGG: dae:Dtox_4216 putative ATPase, transposase-like protein YP_004090398.1 KEGG: tml:GSTUM_00006441001 hypothetical protein YP_004090399.1 KEGG: mac:MA2988 phosphoribosylanthranilate isomerase YP_004090400.1 KEGG: kcr:Kcr_0525 sodium/hydrogen exchanger YP_004090401.1 KEGG: lif:LinJ36.6870 hypothetical protein YP_004090402.1 PFAM: SpoVT/AbrB domain-containing protein; KEGG: cby:CLM_2558 transcriptional regulator, AbrB family YP_004090403.1 KEGG: amt:Amet_4388 hypothetical protein YP_004090404.1 KEGG: dae:Dtox_4217 hypothetical protein YP_004090405.1 PFAM: Mor transcription activator domain protein; KEGG: amt:Amet_4373 hypothetical protein YP_004090406.1 KEGG: dae:Dtox_4223 hypothetical protein YP_004090407.1 KEGG: dae:Dtox_4224 hypothetical protein YP_004090408.1 KEGG: dae:Dtox_4225 hypothetical protein YP_004090409.1 PFAM: NGN domain-containing protein; KEGG: dae:Dtox_4226 NusG antitermination factor YP_004090410.1 TIGRFAM: phage uncharacterized protein; KEGG: cpy:Cphy_2971 phage uncharacterized protein YP_004090411.1 KEGG: spf:SpyM50506 putative minor capsid protein YP_004090412.1 PFAM: minor capsid 2 protein; KEGG: ere:EUBREC_1286 hypothetical protein YP_004090413.1 KEGG: aca:ACP_3325 hypothetical protein YP_004090414.1 PFAM: minor structural GP20 protein; KEGG: lmh:LMHCC_2983 putative scaffolding protein YP_004090415.1 PFAM: PEGA domain protein; KEGG: jde:Jden_2169 major capsid protein HK97 YP_004090416.1 KEGG: lin:lin0111 protein gp8 YP_004090417.1 KEGG: cbl:CLK_1330 hypothetical protein YP_004090418.1 KEGG: ere:EUBREC_1294 hypothetical protein YP_004090419.1 KEGG: cbl:CLK_1328 hypothetical protein YP_004090420.1 KEGG: vpr:Vpar_0046 hemagluttinin domain protein YP_004090421.1 KEGG: cbb:CLD_2456 hypothetical protein YP_004090422.1 KEGG: cbb:CLD_2457 putative protein GP15 YP_004090423.1 TIGRFAM: phage tape measure protein; KEGG: mcu:HMPREF0573_11227 TP901 family phage tail tape measure protein YP_004090424.1 KEGG: rcp:RCAP_rcc00108 ferrichrome ABC transporter periplasmic ferrichrome-binding protein FhuD YP_004090425.1 KEGG: ppw:PputW619_0675 pyrrolo-quinoline quinone YP_004090426.1 KEGG: ami:Amir_5636 hypothetical protein YP_004090427.1 KEGG: tps:THAPS_6956 hypothetical protein YP_004090428.1 KEGG: ckr:CKR_2328 hypothetical protein YP_004090429.1 PFAM: glycoside hydrolase family 25; SH3 type 3 domain protein; KEGG: bcg:BCG9842_B1529 N-acetylmuramoyl-L-alanine amidase YP_004090430.1 KEGG: ere:EUBREC_2081 hypothetical protein YP_004090431.1 KEGG: psp:PSPPH_2358 papain cysteine protease family protein YP_004090432.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mmz:MmarC7_0041 resolvase domain-containing protein YP_004090433.1 KEGG: mla:Mlab_1106 hypothetical protein YP_004090434.1 KEGG: cce:Ccel_2649 hypothetical protein YP_004090435.1 KEGG: aoe:Clos_1896 hypothetical protein YP_004090436.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: clj:CLJU_c36050 putative membrane-bound protein; SMART: GGDEF domain containing protein YP_004090437.1 KEGG: pjd:Pjdr2_1913 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004090438.1 PFAM: YibE/F family protein; KEGG: pjd:Pjdr2_0311 YibE/F family protein YP_004090439.1 PFAM: metallophosphoesterase; KEGG: eel:EUBELI_20557 hypothetical protein YP_004090440.1 PFAM: glycosyl transferase family 2; Methyltransferase type 12; KEGG: cdl:CDR20291_0242 glycosyl transferase family 2 YP_004090441.1 KEGG: adg:Adeg_1127 hypothetical protein YP_004090442.1 KEGG: clj:CLJU_c04550 putative glycosyltransferase; PFAM: glycosyl transferase family 2; Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004090443.1 KEGG: ere:EUBREC_1222 putative transcriptional regulator; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_004090444.1 KEGG: saf:SULAZ_0121 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004090445.1 PFAM: Methyltransferase type 11; KEGG: hmo:HM1_1722 hypothetical protein YP_004090446.1 KEGG: cce:Ccel_1144 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SirA-like domain-containing protein; SMART: Rhodanese domain protein YP_004090447.1 KEGG: tva:TVAG_495790 surface antigen BspA-like YP_004090448.1 KEGG: ele:Elen_2494 ATPase associated with various cellular activities AAA_5; PFAM: ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase YP_004090449.1 KEGG: ele:Elen_2493 hypothetical protein YP_004090451.1 KEGG: cth:Cthe_2689 GntR family transcriptional regulator; PFAM: regulatory protein GntR HTH; aminotransferase class I and II; SMART: regulatory protein GntR HTH YP_004090452.1 KEGG: tjr:TherJR_0010 pyridoxine biosynthesis protein; TIGRFAM: pyridoxine biosynthesis protein; PFAM: Vitamin B6 biosynthesis protein YP_004090453.1 KEGG: cbl:CLK_2186 glutamine amidotransferase subunit PdxT; TIGRFAM: SNO glutamine amidotransferase; PFAM: SNO glutamine amidotransferase YP_004090454.1 PFAM: heat shock protein Hsp20; KEGG: cce:Ccel_2938 heat shock protein HSP20 YP_004090455.1 KEGG: amd:AMED_1395 YVTN beta-propeller repeat-containing protein YP_004090456.1 TIGRFAM: gamma-glutamyl phosphate reductase; KEGG: slp:Slip_1685 gamma-glutamyl phosphate reductase; PFAM: Aldehyde Dehydrogenase YP_004090457.1 KEGG: cth:Cthe_1766 gamma-glutamyl kinase; TIGRFAM: glutamate 5-kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004090458.1 PFAM: glycosyl transferase family 39; KEGG: cac:CA_C0193 hypothetical protein YP_004090459.1 KEGG: dau:Daud_0163 thiamine biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004090460.1 KEGG: aoe:Clos_0931 hypothetical protein YP_004090461.1 TIGRFAM: ornithine carbamoyltransferase; KEGG: cbe:Cbei_4521 ornithine carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004090462.1 KEGG: apa:APP7_0245 acetylornithine aminotransferase; TIGRFAM: acetylornithine and succinylornithine aminotransferase; PFAM: aminotransferase class-III YP_004090463.1 PFAM: nitroreductase; KEGG: ckr:CKR_0293 hypothetical protein YP_004090464.1 TIGRFAM: acetylglutamate kinase; KEGG: cbt:CLH_2869 acetylglutamate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004090465.1 TIGRFAM: arginine biosynthesis bifunctional protein ArgJ; KEGG: ere:EUBREC_1176 arginine biosynthesis bifunctional protein ArgJ; PFAM: arginine biosynthesis protein ArgJ YP_004090466.1 TIGRFAM: N-acetyl-gamma-glutamyl-phosphate reductase; KEGG: scl:sce4967 N-acetyl-gamma-glutamyl-phosphate reductase; PFAM: Semialdehyde dehydrogenase NAD - binding YP_004090467.1 KEGG: hmo:HM1_1460 argininosuccinate lyase; TIGRFAM: argininosuccinate lyase; PFAM: fumarate lyase YP_004090468.1 TIGRFAM: argininosuccinate synthase; KEGG: cth:Cthe_0179 argininosuccinate synthase; PFAM: argininosuccinate synthase YP_004090469.1 KEGG: cbt:CLH_3041 dihydrodipicolinate synthase/N-acetylneuraminate lyase YP_004090470.1 PFAM: flavin reductase domain protein FMN-binding; KEGG: cbe:Cbei_1958 hypothetical protein YP_004090471.1 TIGRFAM: dihydroxy-acid dehydratase; KEGG: mta:Moth_2259 dihydroxyacid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase YP_004090472.1 KEGG: cce:Ccel_0396 lysyl-tRNA synthetase; TIGRFAM: lysyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004090473.1 KEGG: cth:Cthe_2897 transcription elongation factor GreA; TIGRFAM: transcription elongation factor GreA; PFAM: transcription elongation factor GreA/GreB domain-containing protein YP_004090474.1 PFAM: protein of unknown function DUF214; KEGG: ctc:CTC02509 cell division protein FtsX YP_004090475.1 TIGRFAM: cell division ATP-binding protein FtsE; PFAM: ABC transporter related; KEGG: tte:TTE1977 cell division ATPase; SMART: AAA ATPase YP_004090476.1 KEGG: cth:Cthe_1861 CdaR family transcriptional regulator YP_004090477.1 KEGG: sth:STH1527 ribosomal small subunit pseudouridine synthase A; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004090478.1 KEGG: mpt:Mpe_A3285 putative glutathione S-transferase YP_004090479.1 KEGG: rer:RER_13060 hypothetical protein YP_004090480.1 KEGG: cbl:CLK_0308 TetR family transcriptional regulator YP_004090481.1 PFAM: Radical SAM domain protein; KEGG: mla:Mlab_1187 hypothetical protein YP_004090482.1 KEGG: xla:734406 hypothetical protein MGC115024 YP_004090483.1 TIGRFAM: DNA polymerase III, subunits gamma and tau; PFAM: AAA ATPase central domain protein; KEGG: cth:Cthe_2144 DNA polymerase III subunits gamma and tau; SMART: AAA ATPase YP_004090484.1 PFAM: Uncharacterised protein family UPF0133; KEGG: amt:Amet_4780 hypothetical protein YP_004090485.1 PFAM: NUDIX hydrolase; KEGG: cdl:CDR20291_2264 NUDIX-family protein YP_004090486.1 TIGRFAM: recombination protein RecR; PFAM: TOPRIM domain-containing protein; Zinc finger C4-type, RecR; KEGG: cth:Cthe_2142 recombination protein RecR; SMART: Toprim sub domain-containing protein YP_004090487.1 PFAM: regulatory protein TetR; KEGG: cbk:CLL_A1977 transcription regulator YP_004090488.1 KEGG: rsk:RSKD131_1254 PHP C-terminal domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004090489.1 KEGG: lmh:LMHCC_0267 aminopeptidase C (bleomycin hydrolase); PFAM: peptidase C1B bleomycin hydrolase YP_004090490.1 KEGG: tgo:TGME49_118710 ATP-binding cassette sub-family F member 1 YP_004090491.1 KEGG: eel:EUBELI_01673 hypothetical protein; TIGRFAM: TIM-barrel protein, nifR3 family; PFAM: dihydrouridine synthase DuS YP_004090492.1 PFAM: amino acid permease-associated region; KEGG: ckr:CKR_1659 hypothetical protein YP_004090493.1 KEGG: cce:Ccel_1178 ABC-type Na+ efflux pump permease component-like protein YP_004090494.1 KEGG: cce:Ccel_1177 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090495.1 KEGG: cac:CA_C3323 hypothetical protein YP_004090496.1 KEGG: slp:Slip_1330 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004090497.1 KEGG: ske:Sked_06170 hypothetical protein YP_004090498.1 KEGG: clj:CLJU_c26700 hypothetical protein; PFAM: protein of unknown function DUF815; AAA ATPase central domain protein; SMART: AAA ATPase YP_004090499.1 KEGG: cth:Cthe_2516 acetolactate synthase, large subunit; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004090500.1 KEGG: cce:Ccel_3436 acetolactate synthase, small subunit; TIGRFAM: acetolactate synthase, small subunit; PFAM: Acetolactate synthase, small subunit-like; amino acid-binding ACT domain protein YP_004090501.1 TIGRFAM: ketol-acid reductoisomerase; KEGG: cpy:Cphy_3020 ketol-acid reductoisomerase; PFAM: Acetohydroxy acid isomeroreductase catalytic domain-containing protein; acetohydroxy acid isomeroreductase YP_004090502.1 PFAM: ferric-uptake regulator; KEGG: kol:Kole_1528 ferric uptake regulator, Fur family YP_004090503.1 KEGG: cce:Ccel_1373 threonyl-tRNA synthetase; TIGRFAM: threonyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Threonyl/alanyl tRNA synthetase SAD; TGS domain-containing protein; Anticodon-binding domain protein YP_004090504.1 PFAM: protein of unknown function DUF107; KEGG: cpy:Cphy_2940 hypothetical protein YP_004090505.1 KEGG: ere:EUBREC_3261 membrane protease subunits, stomatin/prohibitin-like protein; PFAM: band 7 protein; SMART: band 7 protein YP_004090506.1 TIGRFAM: phosphoribosylaminoimidazole carboxylase, catalytic subunit; KEGG: cce:Ccel_2185 phosphoribosylaminoimidazole carboxylase, catalytic subunit; PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase YP_004090507.1 TIGRFAM: phosphoribosylaminoimidazole-succinocarboxamide synthase; KEGG: cpy:Cphy_3045 phosphoribosylaminoimidazole-succinocarboxamide synthase; PFAM: SAICAR synthetase YP_004090508.1 KEGG: cth:Cthe_1249 amidophosphoribosyltransferase; TIGRFAM: amidophosphoribosyltransferase; PFAM: glutamine amidotransferase class-II; phosphoribosyltransferase YP_004090509.1 TIGRFAM: phosphoribosylformylglycinamidine cyclo-ligase; KEGG: cce:Ccel_2183 phosphoribosylaminoimidazole synthetase; PFAM: AIR synthase related protein domain protein; AIR synthase related protein YP_004090510.1 KEGG: cth:Cthe_1247 phosphoribosylglycinamide formyltransferase; TIGRFAM: phosphoribosylglycinamide formyltransferase; PFAM: formyl transferase domain protein YP_004090511.1 KEGG: cpy:Cphy_0104 phosphoribosylpyrophosphate synthetase; TIGRFAM: ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004090512.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: str:Sterm_0307 glyoxalase/bleomycin resistance protein/dioxygenase YP_004090513.1 KEGG: cce:Ccel_1361 band 7 protein; PFAM: band 7 protein; SMART: band 7 protein YP_004090514.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_3824 GCN5-related N-acetyltransferase YP_004090515.1 SMART: AICARFT/IMPCHase bienzyme formylation region; TIGRFAM: phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; KEGG: cth:Cthe_1246 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase; PFAM: AICARFT/IMPCHase bienzyme formylation region; MGS domain protein YP_004090516.1 TIGRFAM: phosphoribosylamine/glycine ligase; KEGG: cth:Cthe_1245 phosphoribosylamine--glycine ligase; PFAM: Phosphoribosylglycinamide synthetase, ATP-grasp (A) domain; Phosphoribosylglycinamide synthetase, N-domain; Phosphoribosylglycinamide synthetase, C-domain YP_004090517.1 KEGG: ate:Athe_1027 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004090518.1 PFAM: Phosphoglycerate mutase; KEGG: eel:EUBELI_20176 alpha-ribazole phosphatase YP_004090520.1 TIGRFAM: ATP-dependent DNA helicase RecG; PFAM: DEAD/DEAH box helicase domain protein; nucleic acid binding OB-fold tRNA/helicase-type; helicase domain protein; KEGG: aoe:Clos_1441 ATP-dependent DNA helicase RecG; SMART: DEAD-like helicase ; helicase domain protein YP_004090521.1 KEGG: gct:GC56T3_2371 DAK2 domain fusion protein YloV; TIGRFAM: DAK2 domain fusion protein YloV; PFAM: Dak phosphatase YP_004090522.1 PFAM: protein of unknown function DUF322; KEGG: tjr:TherJR_2102 protein of unknown function DUF322 YP_004090523.1 PFAM: extracellular solute-binding protein family 5; KEGG: afo:Afer_0171 extracellular solute-binding protein family 5 YP_004090524.1 PFAM: Stage V sporulation protein S; KEGG: kol:Kole_0336 stage V sporulation protein S YP_004090525.1 KEGG: tte:TTE1371 hypothetical protein YP_004090526.1 TIGRFAM: YmdA/YtgF protein; metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; K Homology, type 1, subgroup; KEGG: cth:Cthe_1091 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region; KH domain protein YP_004090527.1 KEGG: cth:Cthe_1789 ATPase AAA-2; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; UvrB/UvrC protein; Clp ATPase-like; SMART: AAA ATPase YP_004090528.1 PFAM: ATP:guanido phosphotransferase; KEGG: cth:Cthe_1790 ATP:guanido phosphotransferase YP_004090529.1 PFAM: UvrB/UvrC protein; KEGG: bts:Btus_0120 UvrB/UvrC protein YP_004090530.1 PFAM: Firmicute transcriptional repressor of class III stress genes; KEGG: cth:Cthe_1792 firmicute transcriptional repressor of class III stress genes YP_004090531.1 KEGG: cce:Ccel_0359 hypothetical protein YP_004090532.1 KEGG: rop:ROP_41690 hypothetical membrane protein YP_004090533.1 PFAM: protein of unknown function DUF218; KEGG: cce:Ccel_2459 protein of unknown function DUF218 YP_004090534.1 KEGG: aoe:Clos_1623 hypothetical protein YP_004090535.1 KEGG: cth:Cthe_0847 elongation factor P; TIGRFAM: translation elongation factor P; PFAM: Elongation factor P ; Elongation factor KOW-like domain-containing protein; Elongation factor P/YeiP protein YP_004090536.1 PFAM: peptidase M24; creatinase; KEGG: hmo:HM1_0270 xaa-pro dipeptidase, putative YP_004090537.1 TIGRFAM: 3-dehydroquinate dehydratase, type II; KEGG: cce:Ccel_1924 3-dehydroquinate dehydratase; PFAM: dehydroquinase class II YP_004090538.1 KEGG: dau:Daud_1981 xylose isomerase domain-containing protein; PFAM: Xylose isomerase domain-containing protein TIM barrel; SMART: AP endonuclease family 2 YP_004090539.1 KEGG: gtn:GTNG_2462 hypothetical protein; TIGRFAM: HAD superfamily (subfamily IIIA) phosphatase, TIGR01668; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004090540.1 KEGG: clo:HMPREF0868_1339 ribosomal protein S21; TIGRFAM: ribosomal protein S21; PFAM: ribosomal protein S21 YP_004090541.1 PFAM: protein of unknown function DUF404; protein of unknown function DUF407; KEGG: shi:Shel_22870 hypothetical protein YP_004090542.1 KEGG: bll:BLJ_1723 hypothetical protein YP_004090543.1 KEGG: bln:Blon_2207 transglutaminase, N-terminal domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004090544.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: shi:Shel_22840 predicted deacylase YP_004090545.1 PFAM: Succinylglutamate desuccinylase/aspartoacylase; KEGG: cbe:Cbei_4345 succinylglutamate desuccinylase/aspartoacylase YP_004090546.1 PFAM: protein of unknown function UPF0016; KEGG: ckr:CKR_3028 hypothetical protein YP_004090547.1 TIGRFAM: ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; KEGG: tex:Teth514_0821 ribonucleotide-diphosphate reductase subunit alpha; PFAM: ribonucleotide reductase large subunit; Ribonucleotide reductase large subunit domain protein YP_004090548.1 KEGG: scl:sce1587 protein kinase YP_004090549.1 PFAM: Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; KEGG: ccu:Ccur_07880 2-oxoacid:ferredoxin oxidoreductase, gamma subunit YP_004090550.1 PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; KEGG: cbl:CLK_2865 putative 2-oxoacid:acceptor oxidoreductase, beta subunit YP_004090551.1 PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: ele:Elen_1705 pyruvate flavodoxin/ferredoxin oxidoreductase domain protein YP_004090552.1 KEGG: ccu:Ccur_07910 2-oxoglutarate ferredoxin oxidoreductase, delta subunit YP_004090553.1 KEGG: ele:Elen_1707 hypothetical protein YP_004090554.1 KEGG: ckr:CKR_1649 thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC YP_004090555.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gau:GAU_1075 putative diamine acetyltransferase YP_004090556.1 KEGG: amt:Amet_0594 non-specific serine/threonine protein kinase; PFAM: SNF2-related protein; SNF2 helicase associated domain protein ; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004090557.1 KEGG: cac:CA_C2472 alpha/beta fold family hydrolase YP_004090558.1 PFAM: Glycosyl transferase, family 4, conserved region; KEGG: cce:Ccel_0262 UDP-N-acetylglucosamine 2-epimerase YP_004090559.1 TIGRFAM: tryptophanyl-tRNA synthetase; KEGG: cce:Ccel_1411 tryptophanyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib YP_004090560.1 PFAM: aminotransferase class I and II; KEGG: eel:EUBELI_00180 hypothetical protein YP_004090561.1 KEGG: cbf:CLI_1183 glutamyl-tRNA synthetase; TIGRFAM: glutamyl-tRNA synthetase; PFAM: glutamyl/glutaminyl-tRNA synthetase, class Ic, catalytic domain YP_004090562.1 KEGG: mcu:HMPREF0573_11375 phosphate ABC transporter ATP-binding protein; TIGRFAM: phosphate binding protein; PFAM: extracellular solute-binding protein family 1 YP_004090563.1 KEGG: mcu:HMPREF0573_11374 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstC; PFAM: binding-protein-dependent transport systems inner membrane component YP_004090564.1 KEGG: mcu:HMPREF0573_11373 phosphate ABC transporter permease; TIGRFAM: phosphate ABC transporter, inner membrane subunit PstA; PFAM: binding-protein-dependent transport systems inner membrane component YP_004090565.1 TIGRFAM: phosphate ABC transporter, ATPase subunit; PFAM: ABC transporter related; KEGG: tjr:TherJR_2127 phosphate ABC transporter, ATPase subunit; SMART: AAA ATPase YP_004090566.1 KEGG: cce:Ccel_2105 phosphate uptake regulator, PhoU; TIGRFAM: phosphate transport system regulatory protein PhoU; PFAM: PhoU family protein YP_004090567.1 KEGG: cth:Cthe_1600 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004090568.1 TIGRFAM: PAS sensor protein; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; KEGG: pth:PTH_1830 signal transduction histidine kinase; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; PAS domain containing protein YP_004090569.1 PFAM: acylphosphatase; KEGG: bld:BLi00788 YflL YP_004090570.1 TIGRFAM: O-acetylhomoserine/O-acetylserine sulfhydrylase; KEGG: cth:Cthe_1842 O-acetylhomoserine/O-acetylserine sulfhydrylase; PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein YP_004090571.1 PFAM: asparagine synthase; KEGG: ckr:CKR_2212 hypothetical protein YP_004090572.1 PFAM: protein of unknown function UPF0118; KEGG: bwe:BcerKBAB4_1797 hypothetical protein YP_004090573.1 KEGG: dhd:Dhaf_0015 hypothetical protein YP_004090574.1 PFAM: Coat F domain protein; KEGG: dhd:Dhaf_0016 coat F domain protein YP_004090575.1 PFAM: GtrA family protein; KEGG: dae:Dtox_4132 GtrA family protein YP_004090576.1 TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: cce:Ccel_0989 FkbH like protein YP_004090577.1 PFAM: 3-hydroxyacyl-CoA dehydrogenase NAD-binding; 3-hydroxyacyl-CoA dehydrogenase domain-containing protein; KEGG: cce:Ccel_0986 3-hydroxyacyl-CoA dehydrogenase NAD-binding YP_004090578.1 PFAM: acyl-CoA dehydrogenase domain-containing protein; KEGG: cce:Ccel_0988 acyl-CoA dehydrogenase domain protein YP_004090579.1 KEGG: cce:Ccel_0987 hypothetical protein YP_004090580.1 KEGG: bay:RBAM_016900 BaeB YP_004090581.1 manually curated; PFAM: ABC transporter related; KEGG: gym:GYMC10_4797 ABC transporter related protein; SMART: AAA ATPase YP_004090582.1 PFAM: protein of unknown function DUF214; KEGG: lgs:LEGAS_0445 ABC transporter permease YP_004090583.1 PFAM: Acyl transferase; KEGG: cce:Ccel_0975 acyl transferase YP_004090584.1 KEGG: cbe:Cbei_0250 amino acid adenylation domain-containing protein; TIGRFAM: amino acid adenylation domain protein; SagB-type dehydrogenase domain; PFAM: AMP-dependent synthetase and ligase; Beta-ketoacyl synthase ; KR domain protein; phosphopantetheine-binding; condensation domain protein; Non-ribosomal peptide synthetase YP_004090585.1 KEGG: cce:Ccel_0976 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase ; KR domain protein; phosphopantetheine-binding YP_004090586.1 PFAM: AMP-dependent synthetase and ligase; phosphopantetheine-binding; KEGG: ckr:CKR_2077 hypothetical protein YP_004090587.1 KEGG: cce:Ccel_2377 beta-ketoacyl synthase; PFAM: Beta-ketoacyl synthase YP_004090588.1 PFAM: phosphopantetheine-binding; KEGG: cce:Ccel_0974 AMP-dependent synthetase and ligase YP_004090590.1 KEGG: btk:BT9727_1639 multidrug ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090591.1 PFAM: ABC-2 type transporter; KEGG: bbe:BBR47_07540 probable ABC transporter permease protein YP_004090592.1 PFAM: ABC-2 type transporter; KEGG: bld:BLi04003 YfiN YP_004090593.1 KEGG: mcl:MCCL_1735 holo-(acyl-carrier-protein) synthase homolog YP_004090594.1 SMART: CBS domain containing protein; TIGRFAM: inosine-5'-monophosphate dehydrogenase; KEGG: ate:Athe_1639 inosine-5'-monophosphate dehydrogenase; PFAM: IMP dehydrogenase/GMP reductase; CBS domain containing protein YP_004090595.1 KEGG: adg:Adeg_1248 stage V sporulation protein AC; TIGRFAM: stage V sporulation protein AC; PFAM: SpoVA protein YP_004090596.1 KEGG: cth:Cthe_0123 stage V sporulation protein AD; TIGRFAM: stage V sporulation protein AD; PFAM: Stage V sporulation AD family protein YP_004090597.1 KEGG: amt:Amet_2221 sporulation stage V, protein AE; TIGRFAM: stage V sporulation protein AE; PFAM: SpoVA protein YP_004090598.1 KEGG: slp:Slip_1317 TM2 domain containing protein YP_004090599.1 KEGG: cce:Ccel_0298 hypothetical protein YP_004090600.1 PFAM: ABC-type uncharacterised transport system; KEGG: csc:Csac_0364 hypothetical protein YP_004090601.1 KEGG: ate:Athe_2367 hypothetical protein YP_004090602.1 KEGG: csc:Csac_0366 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090603.1 KEGG: cce:Ccel_1946 aspartyl-tRNA synthetase; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type; GAD domain protein YP_004090604.1 TIGRFAM: histidyl-tRNA synthetase; KEGG: cth:Cthe_1332 histidyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004090605.1 TIGRFAM: methylglyoxal synthase; KEGG: csc:Csac_1874 methylglyoxal synthase; PFAM: MGS domain protein YP_004090606.1 KEGG: tro:trd_1925 septum site-determining protein MinD YP_004090607.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; KEGG: cth:Cthe_0091 peptidoglycan glycosyltransferase YP_004090608.1 TIGRFAM: rod shape-determining protein MreD; KEGG: cth:Cthe_0090 hypothetical protein YP_004090609.1 KEGG: tmt:Tmath_0874 rod shape-determining protein MreC; TIGRFAM: rod shape-determining protein MreC; PFAM: Rod shape-determining protein MreC YP_004090610.1 KEGG: cth:Cthe_0088 rod shape-determining protein MreB; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004090611.1 KEGG: cth:Cthe_2655 AbrB family transcriptional regulator; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_004090613.1 PFAM: protein of unknown function DUF710; KEGG: cth:Cthe_2088 hypothetical protein YP_004090614.1 PFAM: peptidase U32; KEGG: ere:EUBREC_1659 peptidase, U32 family YP_004090615.1 TIGRFAM: deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; KEGG: aac:Aaci_1445 deoxyuridine 5'-triphosphate nucleotidohydrolase Dut; PFAM: deoxyUTP pyrophosphatase YP_004090616.1 KEGG: cpy:Cphy_2377 hypothetical protein YP_004090617.1 KEGG: cpf:CPF_0784 alkyl hydroperoxide reductase, C subunit; TIGRFAM: peroxiredoxin; PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; Peroxiredoxin-like YP_004090618.1 PFAM: metallophosphoesterase; KEGG: cbe:Cbei_3739 metallophosphoesterase YP_004090619.1 PFAM: YibE/F family protein; KEGG: cbe:Cbei_3738 YibE/F family protein YP_004090620.1 KEGG: lin:lin2285 hypothetical protein; TIGRFAM: sortase, SrtB family; PFAM: peptidase C60 sortase A and B YP_004090622.1 PFAM: Pyruvate kinase barrel; Pyruvate kinase alpha/beta; manually curated; KEGG: csc:Csac_1831 pyruvate kinase; TIGRFAM: pyruvate kinase YP_004090623.1 KEGG: bwe:BcerKBAB4_3005 peptidase M15B and M15C dd-carboxypeptidase VanY/endolysin; PFAM: peptidase M15B and M15C DD-carboxypeptidase VanY/endolysin YP_004090624.1 KEGG: gym:GYMC10_4270 hypothetical protein YP_004090625.1 KEGG: tjr:TherJR_1877 translation initiation factor IF-3; TIGRFAM: translation initiation factor IF-3; PFAM: translation initiation factor 3-like YP_004090626.1 KEGG: eel:EUBELI_20497 50S ribosomal protein L35; TIGRFAM: ribosomal protein L35; PFAM: Ribosomal protein L35 YP_004090627.1 KEGG: tte:TTE1691 50S ribosomal protein L20; TIGRFAM: ribosomal protein L20; PFAM: ribosomal protein L20 YP_004090628.1 PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding; KEGG: cth:Cthe_1222 RNA methyltransferase YP_004090629.1 KEGG: mta:Moth_1025 DNA processing protein DprA, putative; TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein YP_004090630.1 SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein; TIGRFAM: DNA topoisomerase I; KEGG: cth:Cthe_0460 DNA topoisomerase I; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; DNA topoisomerase type IA zn finger domain protein YP_004090631.1 TIGRFAM: gid protein; KEGG: aac:Aaci_1382 gid protein; PFAM: glucose-inhibited division protein A YP_004090632.1 KEGG: aoe:Clos_1451 putative glycerol-3-phosphate acyltransferase PlsX; TIGRFAM: fatty acid/phospholipid synthesis protein PlsX; PFAM: fatty acid synthesis plsX protein YP_004090633.1 KEGG: hmo:HM1_2166 acyl carrier protein YP_004090634.1 SMART: ribonuclease III; double-stranded RNA binding domain protein; TIGRFAM: ribonuclease III; KEGG: ere:EUBREC_1500 ribonuclease III; PFAM: ribonuclease III; double-stranded RNA binding domain protein YP_004090635.1 KEGG: gem:GM21_1061 radical SAM domain protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004090636.1 PFAM: NADPH-dependent FMN reductase; KEGG: bpo:BP951000_2096 hypothetical protein YP_004090637.1 KEGG: pjd:Pjdr2_3487 chromosome segregation protein SMC; TIGRFAM: chromosome segregation protein SMC; PFAM: SMC domain protein; SMCs flexible hinge domain-containing protein YP_004090638.1 TIGRFAM: signal recognition particle-docking protein FtsY; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; KEGG: cce:Ccel_0697 signal recognition particle-docking protein FtsY; SMART: AAA ATPase YP_004090639.1 TIGRFAM: non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; KEGG: dma:DMR_43210 putative deoxyribonucleotide triphosphate pyrophosphatase; PFAM: Ham1 family protein YP_004090640.1 PFAM: Carboxylesterase type B; KEGG: bsu:BSU34390 para-nitrobenzyl esterase (intracellular esterase B) YP_004090641.1 PFAM: protein of unknown function UPF0044; KEGG: csc:Csac_1573 hypothetical protein YP_004090642.1 TIGRFAM: nicotinate (nicotinamide) nucleotide adenylyltransferase; cytidyltransferase-related domain protein; KEGG: rmr:Rmar_0680 nicotinate (nicotinamide) nucleotide adenylyltransferase; PFAM: cytidylyltransferase YP_004090643.1 TIGRFAM: metal dependent phophohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: ckr:CKR_0797 hypothetical protein; SMART: metal-dependent phosphohydrolase HD region YP_004090644.1 KEGG: cth:Cthe_1238 iojap-like protein; TIGRFAM: iojap-like protein; PFAM: Iojap-related protein YP_004090645.1 KEGG: aoe:Clos_2587 leucyl-tRNA synthetase; TIGRFAM: leucyl-tRNA synthetase YP_004090646.1 KEGG: tit:Thit_0903 hypothetical protein YP_004090647.1 PFAM: protein of unknown function DUF214; KEGG: cpy:Cphy_1027 hypothetical protein YP_004090648.1 KEGG: cpy:Cphy_1026 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090649.1 KEGG: cpy:Cphy_1025 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004090650.1 KEGG: cpy:Cphy_1024 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004090651.1 KEGG: cce:Ccel_0722 putative transcriptional regulator, GntR family YP_004090652.1 PFAM: protein of unknown function DUF111; KEGG: cce:Ccel_2204 protein of unknown function DUF111 YP_004090653.1 TIGRFAM: asparaginyl-tRNA synthetase; KEGG: cth:Cthe_0070 asparaginyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004090654.1 KEGG: pjd:Pjdr2_4386 single-stranded-DNA-specific exonuclease RecJ; TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1 YP_004090655.1 SMART: metal-dependent phosphohydrolase HD region; TIGRFAM: RelA/SpoT family protein; KEGG: csc:Csac_1001 (p)ppGpp synthetase I, SpoT/RelA; PFAM: RelA/SpoT domain protein; metal-dependent phosphohydrolase HD sub domain; TGS domain-containing protein; amino acid-binding ACT domain protein YP_004090656.1 PFAM: Uncharacterised conserved protein UCP033563; KEGG: cth:Cthe_3196 hypothetical protein YP_004090657.1 KEGG: mrb:Mrub_0170 D-tyrosyl-tRNA(Tyr) deacylase; TIGRFAM: D-tyrosyl-tRNA(Tyr) deacylase; PFAM: D-tyrosyl-tRNA(Tyr) deacylase YP_004090658.1 KEGG: adg:Adeg_0381 hydroxyacylglutathione hydrolase YP_004090659.1 PFAM: Radical SAM domain protein; KEGG: cth:Cthe_1341 coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004090660.1 KEGG: cpr:CPR_1347 phosphoribulokinase / uridine kinase family protein YP_004090661.1 KEGG: cth:Cthe_2090 hypothetical protein YP_004090662.1 KEGG: gtn:GTNG_2244 purine nucleoside phosphorylase; TIGRFAM: inosine guanosine and xanthosine phosphorylase family; purine nucleoside phosphorylase I, inosine and guanosine-specific; PFAM: purine or other phosphorylase family 1 YP_004090663.1 KEGG: cth:Cthe_2656 MazG family protein; TIGRFAM: MazG family protein; PFAM: MazG nucleotide pyrophosphohydrolase YP_004090664.1 KEGG: tpd:Teth39_0249 histone family protein DNA-binding protein; PFAM: histone family protein DNA-binding protein; SMART: histone family protein DNA-binding protein YP_004090665.1 KEGG: clj:CLJU_c41660 putative S4 domain-containing protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004090666.1 KEGG: eba:ebA6316 multi anti extrusion protein MatE YP_004090667.1 KEGG: tmt:Tmath_2056 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein YP_004090668.1 PFAM: Spore cortex biosynthesis protein, YabQ-like; KEGG: gtn:GTNG_0054 spore cortex biosynthesis protein YP_004090669.1 PFAM: Septum formation initiator; KEGG: cce:Ccel_3081 septum formation initiator YP_004090670.1 PFAM: RNA binding S1 domain protein; KEGG: cth:Cthe_2662 RNA binding S1 YP_004090671.1 TIGRFAM: thioredoxin reductase; KEGG: cdl:CDR20291_2024 thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004090672.1 PFAM: amidohydrolase; KEGG: cth:Cthe_1777 amidohydrolase YP_004090673.1 KEGG: ssa:SSA_0827 hypothetical protein YP_004090674.1 KEGG: cth:Cthe_2875 sigma 54 modulation protein / SSU ribosomal protein S30P; TIGRFAM: ribosomal subunit interface protein; PFAM: sigma 54 modulation protein/ribosomal protein S30EA YP_004090675.1 KEGG: cpy:Cphy_0947 hypothetical protein YP_004090676.1 KEGG: tit:Thit_0338 putative RNA methylase; PFAM: RNA methylase YP_004090677.1 PFAM: Chaperonin Cpn10; KEGG: cth:Cthe_2891 co-chaperonin GroES YP_004090678.1 KEGG: cth:Cthe_2892 chaperonin GroEL; TIGRFAM: chaperonin GroEL; PFAM: chaperonin Cpn60/TCP-1 YP_004090679.1 TIGRFAM: prolyl-tRNA synthetase; KEGG: cno:NT01CX_0337 prolyl-tRNA synthetase; PFAM: Prolyl-tRNA synthetase, class II-like; Anticodon-binding domain protein; tRNA synthetase class II (G H P and S) YP_004090680.1 KEGG: bpu:BPUM_0467 hypothetical protein YP_004090681.1 KEGG: cbe:Cbei_3647 hypothetical protein YP_004090682.1 KEGG: cth:Cthe_2902 30S ribosomal protein S10; TIGRFAM: ribosomal protein S10; PFAM: ribosomal protein S10 YP_004090683.1 KEGG: tte:TTE2293 50S ribosomal protein L3; TIGRFAM: 50S ribosomal protein L3; PFAM: ribosomal protein L3 YP_004090684.1 PFAM: ribosomal protein L4/L1e; KEGG: cce:Ccel_0759 50S ribosomal protein L4 YP_004090685.1 PFAM: Ribosomal protein L25/L23; KEGG: amt:Amet_4476 50S ribosomal protein L23 YP_004090686.1 KEGG: cth:Cthe_2906 50S ribosomal protein L2; TIGRFAM: ribosomal protein L2; PFAM: ribosomal protein L2 YP_004090687.1 KEGG: hmo:HM1_1382 30S ribosomal protein S19; TIGRFAM: ribosomal protein S19; PFAM: ribosomal protein S19/S15 YP_004090688.1 KEGG: csc:Csac_2282 50S ribosomal protein L22; TIGRFAM: ribosomal protein L22; PFAM: ribosomal protein L22/L17 YP_004090689.1 TIGRFAM: ribosomal protein S3; PFAM: ribosomal protein S3- domain protein; Ribosomal protein S3 domain; KH type 2 domain protein; KEGG: cce:Ccel_0764 ribosomal protein S3; SMART: KH domain protein YP_004090690.1 KEGG: tmt:Tmath_1926 ribosomal protein L16; TIGRFAM: ribosomal protein L16; PFAM: Ribosomal protein L10e/L16 YP_004090691.1 KEGG: cac:CA_C3125 ribosomal protein L29; TIGRFAM: ribosomal protein L29; PFAM: ribosomal protein L29 YP_004090692.1 KEGG: cpy:Cphy_3658 ribosomal protein S17; TIGRFAM: 30S ribosomal protein S17; PFAM: ribosomal protein S17 YP_004090693.1 KEGG: cbe:Cbei_0161 50S ribosomal protein L14; TIGRFAM: ribosomal protein L14; PFAM: ribosomal protein L14b/L23e YP_004090694.1 TIGRFAM: ribosomal protein L24; PFAM: KOW domain protein; KEGG: aco:Amico_0638 ribosomal protein L24; SMART: KOW domain protein YP_004090695.1 KEGG: aoe:Clos_0504 50S ribosomal protein L5 YP_004090696.1 PFAM: ribosomal protein S14; KEGG: cce:Ccel_0771 30S ribosomal protein S14 YP_004090697.1 PFAM: ribosomal protein S8; KEGG: cce:Ccel_0772 30S ribosomal protein S8 YP_004090698.1 KEGG: cth:Cthe_2918 50S ribosomal protein L6P; TIGRFAM: ribosomal protein L6; PFAM: Ribosomal protein L6, alpha-beta domain YP_004090699.1 KEGG: cno:NT01CX_1131 50S ribosomal protein L18; TIGRFAM: ribosomal protein L18; PFAM: ribosomal protein L18P/L5E YP_004090700.1 KEGG: bts:Btus_0170 ribosomal protein S5; TIGRFAM: ribosomal protein S5; PFAM: Ribosomal protein S5 ; ribosomal protein S5 domain protein YP_004090701.1 KEGG: clj:CLJU_c40860 50S ribosomal protein L30; TIGRFAM: ribosomal protein L30; PFAM: ribosomal protein L30 YP_004090702.1 TIGRFAM: ribosomal protein L15; KEGG: afl:Aflv_0124 ribosomal protein L15 YP_004090703.1 KEGG: tjr:TherJR_0316 preprotein translocase, SecY subunit; TIGRFAM: preprotein translocase, SecY subunit; PFAM: SecY protein YP_004090704.1 KEGG: ate:Athe_1725 adenylate kinase; TIGRFAM: adenylate kinase; PFAM: adenylate kinase; adenylate kinase lid domain-containing protein YP_004090705.1 KEGG: bts:Btus_0175 methionine aminopeptidase, type I; TIGRFAM: methionine aminopeptidase, type I; PFAM: peptidase M24 YP_004090706.1 KEGG: cth:Cthe_2926 hypothetical protein YP_004090707.1 KEGG: clj:CLJU_c40820 translation initiation factor IF-1; TIGRFAM: translation initiation factor IF-1; PFAM: S1 IF1 family protein YP_004090708.1 KEGG: clj:CLJU_c40810 50S ribosomal protein L36; TIGRFAM: ribosomal protein L36; PFAM: ribosomal protein L36 YP_004090709.1 KEGG: cth:Cthe_2929 30S ribosomal protein S13; TIGRFAM: 30S ribosomal protein S13; PFAM: ribosomal protein S13 YP_004090710.1 KEGG: cce:Ccel_0785 30S ribosomal protein S11; TIGRFAM: 30S ribosomal protein S11; PFAM: ribosomal protein S11 YP_004090711.1 TIGRFAM: ribosomal protein S4; PFAM: ribosomal protein S4; RNA-binding S4 domain protein; KEGG: cce:Ccel_0786 ribosomal protein S4; SMART: RNA-binding S4 domain protein YP_004090712.1 TIGRFAM: DNA-directed RNA polymerase, alpha subunit; PFAM: RNA polymerase insert; RNA polymerase dimerisation; RNA polymerase alpha subunit domain protein; KEGG: pjd:Pjdr2_5652 DNA-directed RNA polymerase subunit alpha; SMART: RNA polymerase RpoA/D/Rpb3-type YP_004090713.1 KEGG: cac:CA_C3103 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17 YP_004090714.1 KEGG: sye:Syncc9902_0300 RNA-binding region RNP-1 YP_004090715.1 PFAM: pyridoxamine 5'-phosphate oxidase-related FMN-binding; KEGG: cth:Cthe_0219 5-nitroimidazole antibiotic resistance protein YP_004090716.1 TIGRFAM: MTA/SAH nucleosidase; KEGG: bcb:BCB4264_A2883 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; PFAM: purine or other phosphorylase family 1 YP_004090717.1 KEGG: eel:EUBELI_00431 glutamine synthetase; TIGRFAM: glutamine synthetase, type I; PFAM: glutamine synthetase catalytic region; glutamine synthetase beta-Grasp YP_004090718.1 PFAM: ANTAR domain protein; KEGG: dhd:Dhaf_0995 response regulator receiver and ANTAR domain protein YP_004090719.1 PFAM: glycosyl transferase family 39; KEGG: bld:BLi04209 YycA YP_004090720.1 KEGG: cbi:CLJ_B1654 ABC-type MDR transport system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090721.1 PFAM: ABC-2 type transporter; KEGG: cbb:CLD_3005 ABC transporter, permease protein YP_004090722.1 KEGG: cbb:CLD_3004 ABC transporter, permease protein YP_004090723.1 KEGG: cbf:CLI_1631 LuxR family transcriptional regulator; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR; AAA ATPase YP_004090724.1 PFAM: lipase class 3; KEGG: cbe:Cbei_1776 hypothetical protein YP_004090725.1 KEGG: cce:Ccel_1711 transglutaminase domain protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004090726.1 PFAM: protein of unknown function DUF58; KEGG: tjr:TherJR_0784 protein of unknown function DUF58 YP_004090727.1 PFAM: ATPase associated with various cellular activities AAA_3; KEGG: rrs:RoseRS_0692 ATPase YP_004090728.1 PFAM: extracellular solute-binding protein family 1; KEGG: acl:ACL_1068 ABC-type transport system, substrate-binding component YP_004090729.1 KEGG: mla:Mlab_0177 hypothetical protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004090730.1 KEGG: mca:MCA1926 ChrB domain-containing protein YP_004090731.1 KEGG: cce:Ccel_1471 GTP-binding protein TypA; TIGRFAM: GTP-binding protein TypA; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004090732.1 KEGG: cac:CA_C3283 MarR family transcriptional regulator; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004090733.1 KEGG: cbe:Cbei_2093 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004090734.1 KEGG: cac:CA_C3281 ABC-type multidrug/protein/lipid transport system, ATPase component; PFAM: ABC transporter transmembrane region; ABC transporter related; SMART: AAA ATPase YP_004090735.1 KEGG: cbe:Cbei_4823 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004090736.1 PFAM: Stress responsive alpha-beta barrel domain-containing protein; KEGG: cph:Cpha266_1419 stress responsive alpha-beta barrel domain-containing protein YP_004090737.1 TIGRFAM: Mg chelatase, subunit ChlI; PFAM: magnesium chelatase ChlI subunit; KEGG: sti:Sthe_2726 Mg chelatase, subunit ChlI; SMART: AAA ATPase YP_004090738.1 KEGG: gym:GYMC10_4414 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004090739.1 KEGG: ctc:CTC00182 putative phosphatase; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004090740.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cce:Ccel_2089 short-chain dehydrogenase/reductase SDR YP_004090741.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: clj:CLJU_c25150 acyl carrier protein phosphodiesterase YP_004090742.1 KEGG: ctc:CTC00350 spore-cortex-lytic enzyme precursor; TIGRFAM: spore cortex-lytic enzyme; PFAM: cell wall hydrolase SleB; Peptidoglycan-binding domain 1 protein YP_004090743.1 KEGG: eel:EUBELI_01245 glucosamine--fructose-6-phosphate aminotransferase (isomerizing); TIGRFAM: glucosamine/fructose-6-phosphate aminotransferase, isomerizing; PFAM: sugar isomerase (SIS); glutamine amidotransferase class-II YP_004090744.1 PFAM: carbohydrate binding; KEGG: ade:Adeh_3184 glycosyltransferase 36 YP_004090745.1 KEGG: cce:Ccel_1455 TrpR like protein, YerC/YecD; TIGRFAM: TrpR like protein, YerC/YecD; PFAM: Trp repressor YP_004090746.1 PFAM: Methyltransferase type 11; KEGG: cth:Cthe_1855 methyltransferase type 11 YP_004090747.1 PFAM: Hsp33 protein; KEGG: cpy:Cphy_3417 HSP33 protein YP_004090748.1 PFAM: Cl- channel voltage-gated family protein; KEGG: efa:EF2463 voltage-gated chloride channel family protein YP_004090749.1 PFAM: metallophosphoesterase; KEGG: cce:Ccel_0808 metallophosphoesterase YP_004090750.1 PFAM: protein of unknown function DUF1540; KEGG: cbt:CLH_2775 hypothetical protein YP_004090751.1 TIGRFAM: threonine synthase; KEGG: cth:Cthe_1381 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004090752.1 PFAM: Uncharacterised protein family UPF0102; KEGG: sth:STH1475 hypothetical protein YP_004090753.1 KEGG: alv:Alvin_2058 ribonuclease H; PFAM: ribonuclease HII/HIII YP_004090754.1 KEGG: cth:Cthe_0763 GTP-binding protein YlqF; TIGRFAM: ribosome biogenesis GTP-binding protein YlqF; PFAM: GTP-binding protein HSR1-related YP_004090755.1 KEGG: afn:Acfer_0473 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004090756.1 KEGG: cbi:CLJ_B2668 signal peptidase I; TIGRFAM: signal peptidase I; PFAM: Peptidase S24/S26A/S26B, conserved region YP_004090757.1 KEGG: cth:Cthe_0765 50S ribosomal protein L19; TIGRFAM: ribosomal protein L19; PFAM: ribosomal protein L19 YP_004090758.1 KEGG: btk:BT9727_3219 hypothetical protein; PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup YP_004090759.1 PFAM: Uracil-DNA glycosylase superfamily; KEGG: bpa:BPP1370 hypothetical protein YP_004090760.1 KEGG: cth:Cthe_0683 diaminopimelate decarboxylase; TIGRFAM: diaminopimelate decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004090761.1 KEGG: ele:Elen_1096 GTP-binding protein HSR1-related; TIGRFAM: ribosome biogenesis GTP-binding protein YsxC; PFAM: GTP-binding protein HSR1-related YP_004090762.1 SMART: peptidase S16 lon domain protein; AAA ATPase; TIGRFAM: ATP-dependent protease La; KEGG: cth:Cthe_0082 Lon-A peptidase; PFAM: AAA ATPase central domain protein; peptidase S16 lon domain protein YP_004090763.1 KEGG: drm:Dred_3162 serine hydroxymethyltransferase; PFAM: glycine hydroxymethyltransferase YP_004090764.1 KEGG: ctc:CTC01048 recombination factor protein RarA; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004090765.1 KEGG: der:Dere_GG13352 GG13352 gene product from transcript GG13352-RA YP_004090766.1 PFAM: glycosyl transferase family 2; KEGG: bpu:BPUM_3204 family 2 glycosyltransferase YP_004090767.1 KEGG: spv:SPH_0462 putative glycosyl transferase YP_004090768.1 KEGG: sgo:SGO_2015 polysaccharide transporter YP_004090769.1 KEGG: cth:Cthe_3034 hypothetical protein YP_004090770.1 PFAM: Uncharacterised protein family UPF0547; KEGG: cai:Caci_4437 hypothetical protein YP_004090771.1 KEGG: tpr:Tpau_1709 hypothetical protein YP_004090772.1 PFAM: FAD dependent oxidoreductase; KEGG: hmo:HM1_1957 fad dependent oxidoreductase, putative YP_004090773.1 KEGG: gtn:GTNG_0194 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; PFAM: glycosyl transferase family 28; Glycosyltransferase 28 domain YP_004090774.1 KEGG: clj:CLJU_c34350 putative metal dependent transcriptional regulator; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_004090775.1 KEGG: clj:CLJU_c34340 putative manganese/divalent cation transporter; TIGRFAM: Mn2+/Fe2+ transporter, NRAMP family; PFAM: natural resistance-associated macrophage protein YP_004090776.1 PFAM: protein of unknown function DUF1648; KEGG: mba:Mbar_A3397 hypothetical protein YP_004090777.1 PFAM: protein of unknown function DUF1648; KEGG: hmo:HM1_3013 conserved hypothetical protein, putative membrane protein YP_004090778.1 KEGG: cli:Clim_0792 amino acid carrier protein; TIGRFAM: amino acid carrier protein; PFAM: sodium:alanine symporter YP_004090779.1 KEGG: tit:Thit_1365 integrase family protein; PFAM: integrase family protein; helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004090780.1 KEGG: cth:Cthe_0364 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004090781.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: cai:Caci_8339 excision promoter, Xis YP_004090782.1 KEGG: efa:EF2306 hypothetical protein YP_004090783.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: efa:EF2303 hypothetical protein YP_004090784.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: dhd:Dhaf_0513 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein YP_004090785.1 KEGG: shi:Shel_17670 type I restriction-modification system methyltransferase subunit; PFAM: N-6 DNA methylase YP_004090786.1 KEGG: bth:BT_3040 hypothetical protein YP_004090787.1 PFAM: restriction modification system DNA specificity domain; KEGG: pin:Ping_0149 restriction modification system DNA specificity subunit YP_004090788.1 KEGG: ttu:TERTU_3912 putative type I restriction-modification system specificity subunit; manually curated; PFAM: restriction modification system DNA specificity domain YP_004090789.1 PFAM: integrase family protein; KEGG: fma:FMG_1375 putative integrase YP_004090790.1 PFAM: restriction modification system DNA specificity domain; KEGG: clo:HMPREF0868_0491 type I restriction modification DNA specificity domain protein YP_004090791.1 KEGG: neu:NE0384 restriction modification system, type I YP_004090792.1 TIGRFAM: type I site-specific deoxyribonuclease, HsdR family; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; KEGG: clo:HMPREF0868_0494 type I site-specific deoxyribonuclease, HsdR family; SMART: DEAD-like helicase YP_004090793.1 PFAM: restriction endonuclease; KEGG: pgn:PGN_0982 putative Mrr restriction system protein YP_004090794.1 PFAM: Resolvase domain; Resolvase helix-turn-helix domain protein; KEGG: mmz:MmarC7_0041 resolvase domain-containing protein YP_004090795.1 KEGG: psp:PSPPH_2358 papain cysteine protease family protein YP_004090796.1 KEGG: ere:EUBREC_2081 hypothetical protein YP_004090797.1 PFAM: glycoside hydrolase family 25; KEGG: cno:NT01CX_2099 glycosy hydrolase family protein YP_004090798.1 KEGG: ckr:CKR_2328 hypothetical protein YP_004090799.1 KEGG: tps:THAPS_6956 hypothetical protein YP_004090800.1 KEGG: ami:Amir_5636 hypothetical protein YP_004090801.1 KEGG: ppw:PputW619_0675 pyrrolo-quinoline quinone YP_004090802.1 TIGRFAM: phage tail component; KEGG: hau:Haur_2545 alpha-glucosidase YP_004090803.1 TIGRFAM: phage tape measure protein; KEGG: mcu:HMPREF0573_11227 TP901 family phage tail tape measure protein YP_004090804.1 KEGG: dth:DICTH_1150 hypothetical protein YP_004090805.1 KEGG: cbl:CLK_1325 putative protein GP15 YP_004090806.1 KEGG: cbl:CLK_1326 hypothetical protein YP_004090807.1 KEGG: nmg:Nmag_1329 hypothetical protein YP_004090808.1 KEGG: cbl:CLK_1328 hypothetical protein YP_004090809.1 KEGG: ere:EUBREC_1294 hypothetical protein YP_004090810.1 KEGG: cbl:CLK_1330 hypothetical protein YP_004090811.1 KEGG: lin:lin0111 protein gp8 YP_004090812.1 KEGG: jde:Jden_2169 major capsid protein HK97 YP_004090813.1 KEGG: lmh:LMHCC_2983 putative scaffolding protein YP_004090814.1 KEGG: cpc:Cpar_2046 arginyl-tRNA synthetase YP_004090815.1 PFAM: minor capsid 2 protein; KEGG: ere:EUBREC_1286 hypothetical protein YP_004090816.1 KEGG: spa:M6_Spy1364 minor capsid protein YP_004090817.1 TIGRFAM: phage uncharacterized protein; KEGG: cpy:Cphy_2971 phage uncharacterized protein YP_004090818.1 PFAM: NGN domain-containing protein; KEGG: dae:Dtox_4226 NusG antitermination factor YP_004090819.1 KEGG: dae:Dtox_4225 hypothetical protein YP_004090820.1 KEGG: dae:Dtox_4224 hypothetical protein YP_004090821.1 KEGG: dae:Dtox_4223 hypothetical protein YP_004090822.1 KEGG: cvi:CV_0355 hypothetical protein YP_004090823.1 KEGG: dae:Dtox_4217 hypothetical protein YP_004090824.1 KEGG: amt:Amet_4388 hypothetical protein YP_004090825.1 PFAM: SpoVT/AbrB domain-containing protein; KEGG: cby:CLM_2558 transcriptional regulator, AbrB family YP_004090826.1 KEGG: lif:LinJ36.6870 hypothetical protein YP_004090827.1 KEGG: cwo:Cwoe_0992 hypothetical protein YP_004090828.1 KEGG: pen:PSEEN3505 hypothetical protein YP_004090829.1 KEGG: nve:NEMVE_v1g211222 hypothetical protein YP_004090830.1 KEGG: dae:Dtox_4216 putative ATPase, transposase-like protein YP_004090831.1 PFAM: transposase-like Mu ; Integrase catalytic region; KEGG: dae:Dtox_4214 transposase-like Mu YP_004090832.1 KEGG: amt:Amet_2601 IstB ATP binding domain-containing protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004090833.1 KEGG: ppe:PEPE_1019 hypothetical protein YP_004090835.1 KEGG: bay:RBAM_012510 Xre; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004090836.1 PFAM: protein of unknown function DUF955; KEGG: dtu:Dtur_1293 protein of unknown function DUF955 YP_004090837.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004090838.1 KEGG: cbf:CLI_3522 sigma-70 family RNA polymerase sigma factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004090839.1 KEGG: cby:CLM_3793 hypothetical protein YP_004090840.1 KEGG: cby:CLM_3792 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090841.1 KEGG: cbf:CLI_3519 hypothetical protein YP_004090842.1 KEGG: cdl:CDR20291_1754 rna polymerase, sigma-24 subunit, ecf subfamily (ecf subfamily rna polymerase sigma-70 factor) YP_004090843.1 KEGG: ckl:CKL_0264 hypothetical protein YP_004090844.1 manually curated; TIGRFAM: addiction module toxin, RelE/StbE family; KEGG: clo:HMPREF0868_1572 toxin-antitoxin system, toxin component, RelE family; PFAM: plasmid stabilization system YP_004090845.1 KEGG: clo:HMPREF0868_1571 putative toxin-antitoxin system, antitoxin component, ribbon-helix-helix domain protein; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin YP_004090846.1 KEGG: glo:Glov_2706 hypothetical protein YP_004090847.1 KEGG: fma:FMG_0969 hypothetical protein YP_004090848.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Ferric reductase domain protein transmembrane component domain; FAD-binding 8 domain protein; KEGG: dak:DaAHT2_1231 oxidoreductase FAD/NAD(P)-binding domain protein YP_004090849.1 PFAM: cytochrome b5; KEGG: bpf:BpOF4_20214 hypothetical protein YP_004090850.1 PFAM: Protein of unknown function DUF2078, membrane; KEGG: ttj:TTHA1730 hypothetical protein YP_004090851.1 KEGG: cby:CLM_1197 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004090852.1 KEGG: clj:CLJU_c40260 putative sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004090853.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: rop:ROP_70730 oxidoreductase YP_004090854.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: kfl:Kfla_1474 short-chain dehydrogenase/reductase SDR YP_004090855.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: bmd:BMD_1434 LysR family transcriptional regulator YP_004090856.1 KEGG: lrh:LGG_02087 N-acetylmuramoyl-L-alanine amidase; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: metallophosphoesterase; Ig domain protein group 2 domain protein YP_004090857.1 KEGG: cbk:CLL_0005 type IV secretory pathway, VirD4 component YP_004090858.1 KEGG: sen:SACE_6414 diguanylate cyclase/phosphodiesterase with PAS/PAC and GAF sensor(s) YP_004090859.1 PFAM: Ig domain protein; KEGG: tva:TVAG_495790 surface antigen BspA-like YP_004090860.1 PFAM: metallophosphoesterase; Ig domain protein group 2 domain protein; KEGG: lrh:LGG_02087 N-acetylmuramoyl-L-alanine amidase YP_004090861.1 PFAM: protein of unknown function DUF1540; KEGG: cce:Ccel_0727 protein of unknown function DUF1540 YP_004090863.1 manually curated; KEGG: hmo:HM1_1689 hypothetical protein YP_004090864.1 KEGG: clj:CLJU_c25890 putative ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090865.1 KEGG: clj:CLJU_c25880 hypothetical protein YP_004090866.1 KEGG: cdl:CDR20291_0671 DeoR-family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004090867.1 KEGG: bbe:BBR47_00210 hypothetical protein YP_004090868.1 PFAM: type I phosphodiesterase/nucleotide pyrophosphatase; KEGG: bbe:BBR47_00220 hypothetical protein YP_004090869.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_00230 ABC transporter permease protein YP_004090870.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bbe:BBR47_00240 ABC transporter permease protein YP_004090871.1 KEGG: vex:VEA_000665 spermidine putrescine transport ATP-binding protein PotA; PFAM: ABC transporter related; transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004090872.1 KEGG: pjd:Pjdr2_0215 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004090874.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: eel:EUBELI_00149 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type I YP_004090875.1 KEGG: cpy:Cphy_1769 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004090876.1 KEGG: lrl:LC705_00323 PTS system fructose-specific transporter subunit IIC; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphotransferase system EIIC YP_004090877.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: lrl:LC705_00322 PTS system transporter subunit IIA YP_004090878.1 KEGG: cdl:CDR20291_2852 putative transcriptional antiterminator; PFAM: regulatory protein MarR; phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2 YP_004090879.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: amt:Amet_1464 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004090880.1 KEGG: dsy:DSY3440 hypothetical protein YP_004090881.1 KEGG: dhd:Dhaf_1984 cobyrinic acid ac-diamide synthase YP_004090882.1 PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_1260 4-hydroxybenzoyl-CoA thioesterase YP_004090883.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: amt:Amet_1467 dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004090884.1 KEGG: hor:Hore_18400 beta-lactamase domain protein YP_004090886.1 PFAM: Aldehyde Dehydrogenase; KEGG: cbe:Cbei_4936 aldehyde dehydrogenase YP_004090887.1 PFAM: aminotransferase class-III; KEGG: clj:CLJU_c20470 4-aminobutyrate aminotransferase YP_004090888.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cbe:Cbei_4354 iron-containing alcohol dehydrogenase YP_004090889.1 KEGG: ere:EUBREC_0101 hypothetical protein; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004090890.1 KEGG: cbe:Cbei_4943 response regulator receiver protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004090891.1 PFAM: nitrogen regulatory protein P-II; KEGG: cbe:Cbei_4942 nitrogen regulatory protein P-II YP_004090892.1 TIGRFAM: spermidine/putrescine ABC transporter ATPase subunit; PFAM: ABC transporter related; transport-associated OB domain-containing protein; KEGG: cbe:Cbei_4940 spermidine/putrescine ABC transporter ATPase subunit; SMART: AAA ATPase YP_004090893.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_4939 binding-protein-dependent transport systems inner membrane component YP_004090894.1 PFAM: binding-protein-dependent transport systems inner membrane component; extracellular solute-binding protein family 1; KEGG: cbl:CLK_3773 putative spermidine/putrescine ABC transporter, permease protein/spermidine/putrescine-binding protein YP_004090895.1 PFAM: aminotransferase class-III; KEGG: cbe:Cbei_4934 putrescine--2-oxoglutarate aminotransferase YP_004090897.1 KEGG: bmq:BMQ_pBM70141 DNA-binding response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004090898.1 KEGG: pjd:Pjdr2_4498 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004090899.1 KEGG: cpy:Cphy_2590 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090900.1 PFAM: protein of unknown function DUF214; KEGG: ele:Elen_2177 protein of unknown function DUF214 YP_004090901.1 PFAM: PTS system glucitol/sorbitol-specific IIA component; KEGG: cbe:Cbei_0339 PTS system, glucitol/sorbitol-specific IIA subunit YP_004090902.1 PFAM: phosphoryl transfer system HPr; KEGG: cpy:Cphy_1769 phosphotransferase system, phosphocarrier protein HPr YP_004090903.1 KEGG: dth:DICTH_0467 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004090904.1 KEGG: cbe:Cbei_0790 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090905.1 KEGG: ssa:SSA_0844 hypothetical protein YP_004090906.1 KEGG: sna:Snas_4114 hypothetical protein YP_004090907.1 KEGG: gwc:GWCH70_2643 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004090908.1 KEGG: bay:RBAM_009360 YhcI YP_004090909.1 PFAM: aminotransferase class I and II; KEGG: str:Sterm_0115 putative transcriptional regulator, GntR family YP_004090910.1 KEGG: cth:Cthe_0346 hypothetical protein YP_004090911.1 PFAM: protein of unknown function DUF81; KEGG: cce:Ccel_1649 protein of unknown function DUF81 YP_004090912.1 PFAM: protein of unknown function DUF1634; KEGG: cce:Ccel_1650 protein of unknown function DUF1634 YP_004090913.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: clj:CLJU_c37800 putative transcriptional regulator YP_004090914.1 PFAM: Uncharacterised protein family UPF0324; KEGG: clj:CLJU_c37810 hypothetical protein YP_004090915.1 KEGG: amt:Amet_3235 rhodanese domain-containing protein; PFAM: Rhodanese domain protein; SMART: Rhodanese domain protein YP_004090916.1 KEGG: dae:Dtox_2256 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004090917.1 KEGG: cce:Ccel_0632 hypothetical protein YP_004090918.1 KEGG: aac:Aaci_1945 hypothetical protein YP_004090919.1 KEGG: ccu:Ccur_08120 site-specific recombinase, DNA invertase Pin YP_004090920.1 KEGG: rno:64826 forkhead box Q1 YP_004090921.1 KEGG: dsy:DSY3291 hypothetical protein YP_004090922.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004090923.1 KEGG: dsy:DSY3417 hypothetical protein YP_004090924.1 KEGG: dhd:Dhaf_3962 chorismate binding-like protein; TIGRFAM: salicylate synthase; PFAM: Chorismate binding-like YP_004090925.1 KEGG: amr:AM1_A0246 benzoate-CoA ligase; TIGRFAM: benzoate-CoA ligase family; PFAM: AMP-dependent synthetase and ligase YP_004090926.1 KEGG: amr:AM1_A0244 hypothetical protein YP_004090927.1 PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_2222 multidrug resistance protein YP_004090928.1 PFAM: alpha/beta hydrolase fold; KEGG: tjr:TherJR_2353 hydrolase YP_004090929.1 KEGG: plm:Plim_3326 aldehyde dehydrogenase YP_004090930.1 KEGG: sgr:SGR_4243 arylcarboxylate reductase component YP_004090931.1 KEGG: dtu:Dtur_0092 protein of unknown function DUF362 YP_004090932.1 PFAM: helix-turn-helix HxlR type; KEGG: clj:CLJU_c24280 putative transcriptional regulatory protein YP_004090933.1 KEGG: dsy:DSY3291 hypothetical protein YP_004090934.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004090935.1 manually curated; KEGG: dsy:DSY3417 hypothetical protein YP_004090936.1 KEGG: fnu:FN0390 hypothetical protein YP_004090937.1 KEGG: eel:EUBELI_20111 riboflavin synthase beta chain; TIGRFAM: 6,7-dimethyl-8-ribityllumazine synthase; PFAM: 67-dimethyl-8-ribityllumazine synthase YP_004090938.1 KEGG: eel:EUBELI_20112 GTP cyclohydrolase II / 3,4-dihydroxy 2-butanone 4-phosphate synthase; TIGRFAM: GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase; PFAM: 34-dihydroxy-2-butanone 4-phosphate synthase; GTP cyclohydrolase II YP_004090939.1 TIGRFAM: riboflavin synthase, alpha subunit; KEGG: eel:EUBELI_20113 riboflavin synthase alpha chain; PFAM: Lumazine-binding protein YP_004090940.1 TIGRFAM: riboflavin biosynthesis protein RibD; KEGG: ere:EUBREC_3132 riboflavin biosynthesis protein; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminase zinc-binding YP_004090941.1 KEGG: ehi:EHI_103430 cortexillin II YP_004090942.1 KEGG: car:cauri_1899 hypothetical protein YP_004090943.1 manually curated; KEGG: sga:GALLO_2213 putative transcription regulator YP_004090944.1 manually curated; KEGG: dap:Dacet_1375 transcriptional repressor, LexA family YP_004090945.1 PFAM: YibE/F family protein; KEGG: pjd:Pjdr2_0311 YibE/F family protein YP_004090946.1 PFAM: Ig domain protein; Fibronectin type III domain protein; metallophosphoesterase; KEGG: bln:Blon_2122 metallophosphoesterase YP_004090947.1 TIGRFAM: CRISPR-associated protein Cas2; KEGG: dhd:Dhaf_2189 CRISPR-associated protein Cas2 YP_004090948.1 KEGG: amt:Amet_1667 CRISPR-associated Cas1 family protein; TIGRFAM: CRISPR-associated protein Cas1; PFAM: protein of unknown function DUF48 YP_004090949.1 TIGRFAM: CRISPR-associated protein Cas4; KEGG: amt:Amet_1666 CRISPR-associated Cas4 family protein YP_004090950.1 KEGG: bcl:ABC3594 hypothetical protein; TIGRFAM: CRISPR-associated protein, Csd2 family; CRISPR-associated protein, CT1132 family; PFAM: CRISPR-associated protein TM1801 YP_004090951.1 KEGG: dae:Dtox_3649 CRISPR-associated protein, Csd1 family; TIGRFAM: CRISPR-associated protein, Csd1 family; PFAM: CRISPR-associated protein CT1133 YP_004090952.1 KEGG: dae:Dtox_3650 CRISPR-associated protein Cas5 family; TIGRFAM: CRISPR-associated protein Cas5 family; CRISPR-associated protein Cas5; PFAM: CRISPR-associated protein, Cas5 YP_004090953.1 TIGRFAM: CRISPR-associated HD domain protein; CRISPR-associated helicase Cas3; PFAM: helicase domain protein; KEGG: amt:Amet_1662 CRISPR-associated helicase Cas3; SMART: helicase domain protein; DEAD-like helicase YP_004090954.1 KEGG: pdi:BDI_3238 UDP-glucose 6-dehydrogenase; TIGRFAM: nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004090955.1 TIGRFAM: UDP-galactopyranose mutase; KEGG: dfe:Dfer_3361 UDP-galactopyranose mutase; PFAM: UDP-galactopyranose mutase-like; FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004090956.1 KEGG: clj:CLJU_c39640 transaldolase; TIGRFAM: transaldolase; PFAM: transaldolase YP_004090957.1 KEGG: adg:Adeg_0990 protein of unknown function DUF1284; manually curated; PFAM: protein of unknown function DUF1284 YP_004090958.1 PFAM: BioY protein; KEGG: ere:EUBREC_3289 BioY protein YP_004090959.1 KEGG: tpd:Teth39_1761 hypothetical protein YP_004090960.1 KEGG: tte:TTE0518 HD-GYP domain-containing protein; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004090961.1 KEGG: gyc:GYMC61_2654 hypothetical protein YP_004090962.1 manually curated YP_004090963.1 PFAM: Resolvase domain; Recombinase; KEGG: cce:Ccel_3111 resolvase domain protein YP_004090964.1 KEGG: cbf:CLI_0050 hypothetical protein YP_004090965.1 PFAM: sigmaK-factor processing regulatory BofA; KEGG: cac:CA_C0129 SigmaK-factor processing regulatory protein YP_004090966.1 PFAM: polysaccharide biosynthesis protein CapD; KEGG: cth:Cthe_2334 polysaccharide biosynthesis protein CapD YP_004090967.1 TIGRFAM: nucleotide sugar dehydrogenase; KEGG: ate:Athe_1238 nucleotide sugar dehydrogenase; PFAM: UDP-glucose/GDP-mannose dehydrogenase; UDP-glucose/GDP-mannose dehydrogenase dimerisation; UDP-glucose/GDP-mannose dehydrogenase YP_004090968.1 PFAM: transferase hexapeptide repeat containing protein; KEGG: ckr:CKR_2805 hypothetical protein YP_004090969.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: rrs:RoseRS_4430 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004090970.1 KEGG: afw:Anae109_0253 teichoic acid biosynthesis related protein YP_004090971.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: ele:Elen_0638 oxidoreductase domain protein YP_004090972.1 PFAM: polysaccharide biosynthesis protein; KEGG: trq:TRQ2_0310 polysaccharide biosynthesis protein YP_004090973.1 PFAM: glycosyl transferase group 1; KEGG: msu:MS1496 RfaG protein YP_004090974.1 PFAM: glycosyl transferase group 1; KEGG: gct:GC56T3_3171 glycosyl transferase group 1 YP_004090975.1 PFAM: glycosyl transferase group 1; KEGG: bpt:Bpet4822 lipopolysaccharides biosynthesis glycosyltransferase YP_004090976.1 PFAM: glycosyl transferase group 1; KEGG: cbt:CLH_2925 WblI protein YP_004090977.1 KEGG: bsu:BSU37890 putative glutamine-dependent sugar transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004090978.1 PFAM: sugar transferase; KEGG: pdi:BDI_1837 glycosyltransferase YP_004090980.1 PFAM: Aldehyde Dehydrogenase; KEGG: cac:CA_C3657 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase YP_004090981.1 KEGG: mpd:MCP_2185 hypothetical protein YP_004090982.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: drm:Dred_3003 short-chain dehydrogenase/reductase SDR YP_004090983.1 KEGG: nth:Nther_2138 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; SMART: metal-dependent phosphohydrolase HD region YP_004090984.1 KEGG: tmt:Tmath_0708 AAA family ATPase YP_004090985.1 KEGG: cth:Cthe_1840 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004090986.1 KEGG: cth:Cthe_2798 endoribonuclease L-PSP; TIGRFAM: endoribonuclease L-PSP; PFAM: Endoribonuclease L-PSP YP_004090987.1 KEGG: dhd:Dhaf_1145 transcriptional regulator, BadM/Rrf2 family; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004090988.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: csc:Csac_0548 metal dependent phosphohydrolase YP_004090989.1 TIGRFAM: RNA modification enzyme, MiaB family; tRNA-i(6)A37 thiotransferase enzyme MiaB; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: tte:TTE1356 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB YP_004090990.1 KEGG: bts:Btus_1621 protein of unknown function DUF1333 YP_004090991.1 TIGRFAM: DNA mismatch repair protein MutS; PFAM: MutS III domain protein; DNA mismatch repair protein MutS domain protein; MutS II domain protein; MutS IV domain protein; KEGG: cth:Cthe_0777 DNA mismatch repair protein MutS; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein YP_004090992.1 KEGG: sth:STH1748 DNA mismatch repair protein; TIGRFAM: DNA mismatch repair protein MutL; PFAM: MutL dimerisation; DNA mismatch repair protein domain protein; ATP-binding region ATPase domain protein YP_004090993.1 TIGRFAM: tRNA delta(2)-isopentenylpyrophosphate transferase; KEGG: gym:GYMC10_2352 tRNA delta(2)-isopentenylpyrophosphate transferase; PFAM: tRNA isopentenyltransferase YP_004090994.1 KEGG: swo:Swol_0980 hypothetical protein; TIGRFAM: RNA chaperone Hfq; PFAM: Like-Sm ribonucleoprotein core YP_004090995.1 KEGG: aoe:Clos_1406 hypothetical protein YP_004090996.1 PFAM: alanine racemase domain protein; KEGG: mta:Moth_0858 hypothetical protein YP_004090997.1 PFAM: protein of unknown function DUF552; KEGG: cth:Cthe_0791 hypothetical protein YP_004090998.1 PFAM: protein of unknown function YGGT; KEGG: fnu:FN1710 YGGT family integral membrane protein YP_004090999.1 KEGG: nth:Nther_1318 RNA-binding S4 domain protein; PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004091000.1 KEGG: tai:Taci_1264 DivIVA family protein; TIGRFAM: DivIVA domain; PFAM: DivIVA family protein YP_004091001.1 KEGG: cce:Ccel_1855 isoleucyl-tRNA synthetase; TIGRFAM: isoleucyl-tRNA synthetase YP_004091002.1 KEGG: spa:M6_Spy0655 lipoprotein signal peptidase; TIGRFAM: lipoprotein signal peptidase; PFAM: peptidase A8 signal peptidase II YP_004091003.1 TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; KEGG: ere:EUBREC_1731 pseudouridine synthase, RluA family; SMART: RNA-binding S4 domain protein YP_004091004.1 KEGG: cth:Cthe_3074 Cof-like hydrolase; TIGRFAM: HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004091005.1 PFAM: transketolase domain-containing protein; KEGG: cth:Cthe_2704 transketolase subunit A YP_004091006.1 PFAM: transketolase central region; transketolase domain-containing protein; KEGG: ere:EUBREC_2459 transketolase, C-terminal subunit YP_004091007.1 KEGG: aoe:Clos_2053 calcium-translocating P-type ATPase, PMCA-type; TIGRFAM: calcium-translocating P-type ATPase, PMCA-type; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004091008.1 KEGG: dhd:Dhaf_4308 hypothetical protein YP_004091009.1 TIGRFAM: branched-chain amino acid aminotransferase; KEGG: cth:Cthe_0856 branched chain amino acid aminotransferase; PFAM: aminotransferase class IV YP_004091010.1 KEGG: cth:Cthe_2328 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004091011.1 KEGG: clj:CLJU_c41990 putative metal dependent hydrolase YP_004091012.1 PFAM: protein of unknown function DUF163; KEGG: sha:SH0023 hypothetical protein YP_004091013.1 KEGG: rop:ROP_15240 hypothetical protein YP_004091014.1 KEGG: gct:GC56T3_2965 CBS domain containing protein; PFAM: CBS domain containing protein; SMART: CBS domain containing protein YP_004091015.1 KEGG: sun:SUN_2300 hypothetical protein YP_004091016.1 SMART: PDZ/DHR/GLGF domain protein; TIGRFAM: stage IV sporulation protein B; KEGG: cth:Cthe_0813 SpoIVB peptidase; PFAM: peptidase S55 SpoIVB; PDZ/DHR/GLGF domain protein YP_004091017.1 KEGG: cbk:CLL_A2395 sporulation transcription factor Spo0A; PFAM: Sporulation initiation factor Spo0A ; response regulator receiver; SMART: response regulator receiver YP_004091018.1 KEGG: cac:CA_C2851 fused transcriptional regulator/membrane protein; PFAM: TrkA-C domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004091019.1 KEGG: cpy:Cphy_1769 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004091020.1 KEGG: cpy:Cphy_1770 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004091021.1 PFAM: PRD domain protein; CAT RNA-binding domain protein; KEGG: tmt:Tmath_0526 transcriptional antiterminator, BglG YP_004091022.1 KEGG: bpf:BpOF4_14615 PTS system, glucose-specific enzyme II, A component; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease EIIA 1 domain YP_004091023.1 TIGRFAM: PTS system, glucose-like IIB subunint; KEGG: brm:Bmur_2105 PTS system, glucose subfamily, IIA subunit; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004091024.1 PFAM: glycosyl transferase family 39; KEGG: ckr:CKR_1254 hypothetical protein YP_004091025.1 KEGG: dhd:Dhaf_4308 hypothetical protein YP_004091026.1 PFAM: SpoVR family protein; KEGG: cpf:CPF_1539 stage V sporulation protein R YP_004091027.1 KEGG: cac:CA_C0580 hypothetical protein; TIGRFAM: sporulation protein YhbH; PFAM: protein of unknown function DUF444 YP_004091028.1 KEGG: ckr:CKR_0569 hypothetical protein; PFAM: PrkA AAA domain protein; PrkA serine kinase; SMART: PrkA AAA domain protein YP_004091029.1 PFAM: aminodeoxychorismate lyase; KEGG: bts:Btus_1142 aminodeoxychorismate lyase YP_004091030.1 PFAM: fructose-bisphosphate aldolase class-I; KEGG: cbe:Cbei_3039 fructose-1,6-bisphosphate aldolase YP_004091031.1 PFAM: metallophosphoesterase; KEGG: pjd:Pjdr2_3204 metallophosphoesterase YP_004091032.1 KEGG: lmo:lmo2363 hypothetical protein; TIGRFAM: glutamate decarboxylase; PFAM: Pyridoxal-dependent decarboxylase YP_004091033.1 KEGG: bha:BH3958 carboxynorspermidine decarboxylase; TIGRFAM: carboxynorspermidine decarboxylase; PFAM: Orn/DAP/Arg decarboxylase 2 YP_004091034.1 PFAM: Saccharopine dehydrogenase; KEGG: bha:BH3957 hypothetical protein YP_004091035.1 KEGG: aoe:Clos_0384 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_004091036.1 PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein; KEGG: afn:Acfer_1890 Orn/Lys/Arg decarboxylase major region YP_004091037.1 TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; KEGG: chy:CHY_1375 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region YP_004091038.1 KEGG: clj:CLJU_c40590 fumarate hydratase subunit beta; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region YP_004091039.1 PFAM: malic protein NAD-binding; malic protein domain protein; KEGG: cth:Cthe_0344 malate dehydrogenase YP_004091040.1 KEGG: cno:NT01CX_2018 hypothetical protein YP_004091041.1 manually curated; KEGG: cac:CA_C0966 hypothetical protein YP_004091042.1 PFAM: ROK family protein; KEGG: cth:Cthe_2938 glucokinase YP_004091043.1 KEGG: cbe:Cbei_1443 alpha-glucosidase; PFAM: glycoside hydrolase family 31 YP_004091044.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cno:NT01CX_0967 sugar ABC transporter, permease protein YP_004091045.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: mcl:MCCL_0354 multiple sugar-binding transport system, permease protein homolog YP_004091046.1 PFAM: extracellular solute-binding protein family 1; KEGG: oih:OB2570 multiple sugar-binding transport system multiple sugar-binding protein YP_004091047.1 KEGG: cbe:Cbei_0731 alanine racemase; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004091048.1 KEGG: lbr:LVIS_2180 trehalose-6-phosphate hydrolase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004091049.1 KEGG: lmh:LMHCC_2376 oligo-1,6-glucosidase (oligosaccharide alpha-1,6-glucosidase) (sucrase-isomaltase) (isomaltase) (dextrin 6-alpha-D-glucanohydrolase); PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004091050.1 KEGG: cce:Ccel_1974 hypothetical protein YP_004091051.1 KEGG: bpu:BPUM_3612 LacI family transcriptional regulator LacR; PFAM: regulatory protein LacI; SMART: regulatory protein LacI YP_004091052.1 PFAM: extracellular solute-binding protein family 1; KEGG: aac:Aaci_1215 extracellular solute-binding protein family 1 YP_004091053.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: aac:Aaci_1216 binding-protein-dependent transport systems inner membrane component YP_004091054.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cai:Caci_2029 binding-protein-dependent transport systems inner membrane component YP_004091055.1 PFAM: glycoside hydrolase family 2 TIM barrel; glycoside hydrolase family 2 sugar binding; glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 42 domain 5 loop region; KEGG: cce:Ccel_0154 glycoside hydrolase family 2 TIM barrel YP_004091056.1 PFAM: glycoside hydrolase family 35; KEGG: ote:Oter_1364 beta-galactosidase YP_004091057.1 KEGG: cbe:Cbei_4465 aldose 1-epimerase; PFAM: Aldose 1-epimerase YP_004091058.1 KEGG: eel:EUBELI_01846 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase YP_004091059.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: csc:Csac_1510 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_004091060.1 KEGG: bsu:BSU38860 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004091061.1 TIGRFAM: D-alanine/D-alanine ligase; KEGG: cce:Ccel_0283 D-alanyl-alanine synthetase A; PFAM: D-alanine--D-alanine ligase domain protein YP_004091062.1 TIGRFAM: glutamate racemase; KEGG: gem:GM21_0260 glutamate racemase; PFAM: Asp/Glu/hydantoin racemase YP_004091063.1 PFAM: Domain of unknown function DUF1934; KEGG: cce:Ccel_0284 hypothetical protein YP_004091064.1 TIGRFAM: arginyl-tRNA synthetase; KEGG: cce:Ccel_0285 arginyl-tRNA synthetase YP_004091065.1 KEGG: cdl:CDR20291_0954 putative phosphoesterase; manually curated; PFAM: metallophosphoesterase YP_004091066.1 TIGRFAM: homoserine O-succinyltransferase; KEGG: cce:Ccel_3331 homoserine O-succinyltransferase; PFAM: homoserine O-succinyltransferase YP_004091067.1 KEGG: cth:Cthe_2619 rod shape-determining protein Mbl; TIGRFAM: cell shape determining protein, MreB/Mrl family; PFAM: cell shape determining protein MreB/Mrl YP_004091068.1 PFAM: phosphoribosyltransferase; KEGG: rxy:Rxyl_1623 phosphoribosyltransferase YP_004091069.1 TIGRFAM: helicase, RecD/TraA family; KEGG: cth:Cthe_2249 ATP-dependent RecD/TraA family DNA helicase; SMART: AAA ATPase YP_004091070.1 PFAM: GCN5-related N-acetyltransferase; KEGG: gbm:Gbem_1244 GCN5-related N-acetyltransferase YP_004091071.1 PFAM: Peptidase M23; KEGG: cth:Cthe_2617 peptidase M23B YP_004091072.1 KEGG: cbf:CLI_3547 MerR family transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_004091073.1 PFAM: NADPH-dependent FMN reductase; KEGG: cbf:CLI_3546 putative NADPH-dependent FMN reductase YP_004091074.1 KEGG: bts:Btus_3213 stage II sporulation protein D; TIGRFAM: stage II sporulation protein D; SpoIID/LytB domain protein; PFAM: Stage II sporulation protein D YP_004091075.1 PFAM: Citrate synthase; KEGG: mta:Moth_1122 citrate synthase YP_004091076.1 KEGG: nfa:nfa43970 putative multidrug efflux transporter YP_004091077.1 TIGRFAM: serine O-acetyltransferase; KEGG: cth:Cthe_2066 serine O-acetyltransferase YP_004091078.1 TIGRFAM: cysteinyl-tRNA synthetase; KEGG: cth:Cthe_2065 cysteinyl-tRNA synthetase; PFAM: Cysteinyl-tRNA synthetase class Ia ; Cysteinyl-tRNA synthetase class Ia DALR YP_004091079.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: gym:GYMC10_4684 transcriptional regulator, LysR family YP_004091080.1 PFAM: oxidoreductase domain protein; Oxidoreductase domain; KEGG: lga:LGAS_1543 dehydrogenase related protein YP_004091081.1 TIGRFAM: ribose 5-phosphate isomerase; KEGG: cbe:Cbei_0761 ribose 5-phosphate isomerase; PFAM: Ribose 5-phosphate isomerase YP_004091082.1 KEGG: cpy:Cphy_2132 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004091083.1 KEGG: gyc:GYMC61_2973 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004091084.1 PFAM: protein of unknown function DUF1648; KEGG: ckr:CKR_2149 hypothetical protein YP_004091085.1 PFAM: lipolytic protein G-D-S-L family; KEGG: str:Sterm_3728 lipolytic protein G-D-S-L family YP_004091086.1 PFAM: ApbE family lipoprotein; KEGG: aco:Amico_0113 ApbE family lipoprotein YP_004091087.1 PFAM: FMN-binding domain protein; KEGG: cbe:Cbei_4492 FMN-binding domain-containing protein YP_004091088.1 PFAM: Rubrerythrin; KEGG: cpy:Cphy_2815 rubrerythrin YP_004091089.1 KEGG: csc:Csac_2346 ABC transporter related; PFAM: ABC transporter related; transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004091090.1 KEGG: tte:TTE1266 signal peptidase, cleaves prepilin-like proteins; PFAM: peptidase A24A domain protein; peptidase A24A prepilin type IV YP_004091091.1 KEGG: amt:Amet_3482 type II secretion system protein E; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase YP_004091092.1 TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: tte:TTE1263 pili biogenesis protein PilT-like ATPase; SMART: AAA ATPase YP_004091093.1 KEGG: det:DET1360 general secretion family protein YP_004091094.1 KEGG: deh:cbdb_A1311 general secretion family protein YP_004091095.1 KEGG: pth:PTH_1148 DNA-directed RNA polymerase specialized sigma subunit; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein YP_004091096.1 KEGG: ecg:E2348C_2377 adhesin YP_004091097.1 KEGG: meh:M301_1279 mannose-sensitive hemagglutinin A YP_004091098.1 KEGG: sbp:Sbal223_0849 hypothetical protein YP_004091099.1 KEGG: cbt:CLH_3050 hypothetical protein YP_004091100.1 KEGG: ssa:SSA_2308 hypothetical protein YP_004091101.1 KEGG: cno:NT01CX_1603 fimbrial assembly protein, putative YP_004091102.1 PFAM: Type II secretion system F domain; KEGG: tmt:Tmath_1113 type II secretion system F domain protein YP_004091103.1 PFAM: Conserved hypothetical protein CHP00245; KEGG: sub:SUB1166 membrane protein YP_004091104.1 KEGG: sub:SUB1167 ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091105.1 KEGG: bsu:BSU38860 UDP-glucose 4-epimerase; TIGRFAM: UDP-glucose 4-epimerase; PFAM: NAD-dependent epimerase/dehydratase YP_004091106.1 PFAM: basic membrane lipoprotein; KEGG: clj:CLJU_c39630 putative ABC transporter periplasmic protein YP_004091107.1 KEGG: clj:CLJU_c39620 putative ABC transporter ATPase; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091108.1 PFAM: inner-membrane translocator; KEGG: clj:CLJU_c39610 putative ABC transporter permease YP_004091109.1 PFAM: inner-membrane translocator; KEGG: clj:CLJU_c39600 putative ABC transporter permease YP_004091110.1 KEGG: cbt:CLH_2364 chloramphenicol acetyltransferase YP_004091112.1 KEGG: cbe:Cbei_4823 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004091113.1 KEGG: cbe:Cbei_0458 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004091114.1 KEGG: cac:CA_C1461 hypothetical protein YP_004091115.1 PFAM: PTS system mannose/fructose/sorbose family IID component; KEGG: str:Sterm_3426 PTS system mannose/fructose/sorbose family IID component YP_004091116.1 PFAM: phosphotransferase system PTS sorbose-specific IIC subunit; KEGG: str:Sterm_3427 phosphotransferase system PTS sorbose-specific IIC subunit YP_004091117.1 PFAM: PTS system sorbose subfamily IIB component; KEGG: str:Sterm_3428 PTS system sorbose subfamily IIB component YP_004091118.1 PFAM: PTS system fructose subfamily IIA component; KEGG: str:Sterm_3429 PTS system fructose subfamily IIA component YP_004091119.1 KEGG: spe:Spro_4282 hypothetical protein YP_004091120.1 PFAM: extracellular solute-binding protein family 1; KEGG: cac:CA_C1456 sugar-binding periplasmic protein YP_004091121.1 KEGG: ssa:SSA_0217 two-component response transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004091122.1 KEGG: cac:CA_C1454 membrane associated histidine kinase-like ATPase; PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004091123.1 PFAM: periplasmic binding protein/LacI transcriptional regulator; KEGG: cac:CA_C1453 ribose ABC transporter periplasmic ribose-binding protein YP_004091124.1 PFAM: protein of unknown function DUF204; KEGG: ele:Elen_1273 protein of unknown function DUF204 YP_004091125.1 KEGG: pin:Ping_2639 P-loop ATPase YP_004091126.1 SMART: glycoside hydrolase family 32; manually curated; KEGG: cac:CA_C0425 sucrase-6-phosphate hydrolase (gene SacA); TIGRFAM: sucrose-6-phosphate hydrolase; PFAM: Glycosyl hydrolase family 32 domain protein YP_004091127.1 TIGRFAM: PTS system, sucrose-specific IIBC subunit; PTS system, glucose-like IIB subunint; KEGG: cac:CA_C0423 fusion: PTS system, beta-glucosides specific IIABC component; PFAM: phosphotransferase system EIIC; Phosphotransferase system EIIB/cysteine, phosphorylation site YP_004091128.1 KEGG: str:Sterm_3656 transcriptional regulator, LacI family; PFAM: regulatory protein LacI; periplasmic binding protein/LacI transcriptional regulator; SMART: regulatory protein LacI YP_004091129.1 KEGG: vpr:Vpar_1767 TPR repeat-containing protein; PFAM: Tetratricopeptide TPR_1 repeat-containing protein; SMART: Tetratricopeptide repeat YP_004091130.1 KEGG: cpy:Cphy_3381 xanthine phosphoribosyltransferase; TIGRFAM: xanthine phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004091131.1 KEGG: cbk:CLL_A1060 HAD hydrolase, family IA; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004091132.1 KEGG: bwe:BcerKBAB4_1649 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; Cupin 2 conserved barrel domain protein; SMART: helix-turn-helix domain protein YP_004091133.1 KEGG: gym:GYMC10_6021 adenine deaminase; PFAM: amidohydrolase YP_004091134.1 KEGG: dhd:Dhaf_0657 hypothetical protein YP_004091135.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: bmd:BMD_3487 putative N-acylglucosamine 2-epimerase YP_004091136.1 KEGG: cth:Cthe_2938 glucokinase; TIGRFAM: glucokinase, ROK family; mannose-6-phosphate isomerase, class I; PFAM: ROK family protein; mannose-6-phosphate isomerase type I YP_004091137.1 KEGG: tpd:Teth39_0727 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004091138.1 KEGG: efa:EF1020 glycosy hydrolase family protein; PFAM: glycoside hydrolase family 1 YP_004091139.1 KEGG: lwe:lwe0887 GntR family transcriptional regulator; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004091140.1 PFAM: glycoside hydrolase family 1; KEGG: kva:Kvar_3531 glycoside hydrolase family 1 YP_004091141.1 PFAM: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit; KEGG: bcu:BCAH820_3045 PTS system, lactose/cellobiose-specific IIA subunit YP_004091142.1 PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; KEGG: lsg:lse_0323 PTS system, IIB component YP_004091143.1 PFAM: phosphotransferase system EIIC; manually curated; KEGG: enc:ECL_02906 PTS system lactose/cellobiose family IIC subunit; TIGRFAM: PTS system, lactose/cellobiose family IIC subunit YP_004091144.1 KEGG: cpf:CPF_1284 camphor resistance protein CrcB; TIGRFAM: CrcB protein; PFAM: Camphor resistance CrcB protein YP_004091145.1 PFAM: protein of unknown function DUF190; KEGG: mba:Mbar_A1299 hypothetical protein YP_004091146.1 PFAM: periplasmic binding protein; KEGG: mta:Moth_1419 periplasmic binding protein YP_004091147.1 KEGG: mac:MA1198 iron ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091148.1 PFAM: transport system permease protein; KEGG: swo:Swol_1676 transport system permease protein YP_004091149.1 PFAM: Methyltransferase type 11; KEGG: swo:Swol_1688 methyltransferase YP_004091150.1 TIGRFAM: molybdenum cofactor biosynthesis protein A; PFAM: Radical SAM domain protein; molybdenum cofactor synthesis domain protein; KEGG: cbe:Cbei_1989 molybdenum cofactor biosynthesis protein A; SMART: Elongator protein 3/MiaB/NifB YP_004091151.1 KEGG: tjr:TherJR_0762 molybdenum cofactor synthesis domain protein; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain YP_004091152.1 KEGG: clj:CLJU_c17110 putative molybdenum cofactor biosynthesis enzyme; TIGRFAM: molybdenum cofactor synthesis domain protein; PFAM: molybdopterin binding domain; MoeA domain protein domain I and II YP_004091153.1 PFAM: glycosyl transferase family 2; type IV pilus assembly PilZ; KEGG: bcg:BCG9842_B3597 glycosyltransferase YP_004091154.1 PFAM: arsenate reductase and related; KEGG: dhd:Dhaf_2269 arsenate reductase and related YP_004091155.1 PFAM: Substrate-binding region of ABC-type glycine betaine transport system; KEGG: cbe:Cbei_3541 substrate-binding region of ABC-type glycine betaine transport system YP_004091156.1 PFAM: basic membrane lipoprotein; KEGG: cbe:Cbei_4147 basic membrane lipoprotein YP_004091157.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; GGDEF domain containing protein; histidine kinase HAMP region domain protein; KEGG: slp:Slip_1139 diguanylate cyclase/phosphodiesterase with GAF sensor; SMART: EAL domain protein; GGDEF domain containing protein YP_004091158.1 KEGG: amt:Amet_3805 signal transduction histidine kinase, LytS; PFAM: ATP-binding region ATPase domain protein; histidine kinase internal region; SMART: ATP-binding region ATPase domain protein YP_004091159.1 KEGG: dae:Dtox_0623 protein of unknown function DUF291 YP_004091160.1 KEGG: dae:Dtox_3752 protein of unknown function DUF291; PFAM: Ig domain protein group 2 domain protein; cell surface receptor IPT/TIG domain protein; SMART: Ig domain protein group 2 domain protein YP_004091162.1 KEGG: mcu:HMPREF0573_10804 DNA topoisomerase YP_004091163.1 KEGG: dae:Dtox_2891 hypothetical protein YP_004091164.1 KEGG: dae:Dtox_2892 hypothetical protein YP_004091165.1 KEGG: dae:Dtox_0627 hypothetical protein YP_004091166.1 KEGG: dae:Dtox_3747 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004091167.1 manually curated; KEGG: dae:Dtox_3746 hypothetical protein YP_004091168.1 manually curated; PFAM: response regulator receiver; KEGG: amt:Amet_3804 response regulator receiver/SARP domain-containing protein; SMART: response regulator receiver YP_004091170.1 KEGG: mac:MA4289 cell surface protein YP_004091171.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004091172.1 manually curated; KEGG: bbe:BBR47_44600 hypothetical protein YP_004091173.1 KEGG: san:gbs0765 hypothetical protein YP_004091174.1 KEGG: dsy:DSY3291 hypothetical protein YP_004091175.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004091176.1 KEGG: dsy:DSY3417 hypothetical protein YP_004091177.1 KEGG: gyc:GYMC61_1939 hypothetical protein YP_004091178.1 PFAM: glycoside hydrolase family 8; KEGG: chu:CHU_2852 beta-glycosidase-like protein YP_004091179.1 KEGG: dsy:DSY3291 hypothetical protein YP_004091180.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004091181.1 KEGG: dsy:DSY3417 hypothetical protein YP_004091183.1 PFAM: aldo/keto reductase; KEGG: pjd:Pjdr2_0253 aldo/keto reductase YP_004091184.1 KEGG: cce:Ccel_1974 hypothetical protein YP_004091185.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: cth:Cthe_1265 alpha-phosphoglucomutase YP_004091186.1 TIGRFAM: mannose-6-phosphate isomerase, class I; KEGG: eel:EUBELI_00149 mannose-1-phosphate guanylyltransferase; PFAM: mannose-6-phosphate isomerase type I YP_004091187.1 PFAM: glycoside hydrolase family 2 immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2 sugar binding; KEGG: pjd:Pjdr2_5065 glycoside hydrolase family 2 sugar binding YP_004091188.1 TIGRFAM: beta-galactosidase; KEGG: eat:EAT1b_2183 beta-galactosidase; PFAM: glycoside hydrolase family 1 YP_004091189.1 KEGG: cpy:Cphy_3056 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D YP_004091190.1 KEGG: gym:GYMC10_3612 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004091191.1 KEGG: apr:Apre_1137 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004091192.1 PFAM: extracellular solute-binding protein family 1; KEGG: bde:BDP_0125 ABC transport system, sugar-binding component YP_004091193.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bde:BDP_0126 ABC-type sugar transport system, permease component YP_004091194.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bde:BDP_0127 ABC-type sugar transport system, permease component YP_004091195.1 PFAM: glycosidase related protein; KEGG: cpy:Cphy_2264 glycosidase PH1107-related YP_004091196.1 PFAM: N-acylglucosamine 2-epimerase; KEGG: cpy:Cphy_2262 N-acylglucosamine 2-epimerase YP_004091197.1 PFAM: glycosidase related protein; KEGG: pjd:Pjdr2_2155 glycosidase PH1107-related YP_004091198.1 KEGG: bde:BDP_0122 sialic acidspecific 9-O-acetylesterase; PFAM: protein of unknown function DUF303 acetylesterase YP_004091199.1 KEGG: jde:Jden_0730 hypothetical protein YP_004091200.1 KEGG: mhu:Mhun_0016 methyl-accepting chemotaxis sensory transducer with PAS/Pac sensor; PFAM: chemotaxis sensory transducer; histidine kinase HAMP region domain protein; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004091201.1 PFAM: glycerol-3-phosphate responsive antiterminator; KEGG: gym:GYMC10_0487 glycerol-3-phosphate responsive antiterminator, GlpP YP_004091202.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CA_C0427 glycerol-3-phosphate ABC-transporter, permease component YP_004091203.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cac:CA_C0428 sugar permease YP_004091204.1 PFAM: extracellular solute-binding protein family 1; KEGG: cac:CA_C0429 glicerol-3-phosphate ABC-transporter, periplasmic component YP_004091205.1 KEGG: csc:Csac_2346 ABC transporter related; PFAM: ABC transporter related; transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004091206.1 PFAM: glycerophosphoryl diester phosphodiesterase; KEGG: tte:TTE0993 glycerophosphoryl diester phosphodiesterase YP_004091207.1 KEGG: ckr:CKR_0892 hypothetical protein; PFAM: peptidase M14 carboxypeptidase A; SMART: peptidase M14 carboxypeptidase A YP_004091208.1 PFAM: NUDIX hydrolase; KEGG: mta:Moth_1504 NUDIX hydrolase YP_004091209.1 TIGRFAM: diaminopimelate epimerase; KEGG: dds:Ddes_1150 diaminopimelate epimerase; PFAM: diaminopimelate epimerase YP_004091210.1 KEGG: plm:Plim_3995 aminotransferase class I and II; TIGRFAM: LL-diaminopimelate aminotransferase; PFAM: aminotransferase class I and II YP_004091211.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lrl:LC705_02336 acetyltransferase YP_004091212.1 KEGG: mem:Memar_1738 hypothetical protein YP_004091213.1 KEGG: ncr:NCU05210 hypothetical protein YP_004091214.1 KEGG: afn:Acfer_1603 amidohydrolase; TIGRFAM: amidohydrolase; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004091215.1 TIGRFAM: 3-isopropylmalate dehydrogenase; KEGG: cce:Ccel_0128 3-isopropylmalate dehydrogenase; PFAM: isocitrate/isopropylmalate dehydrogenase YP_004091216.1 KEGG: ere:EUBREC_1995 3-isopropylmalate dehydratase small subunit; TIGRFAM: 3-isopropylmalate dehydratase, small subunit; PFAM: aconitate hydratase domain-containing protein YP_004091217.1 KEGG: cce:Ccel_0126 3-isopropylmalate dehydratase large subunit; TIGRFAM: 3-isopropylmalate dehydratase, large subunit; 3-isopropylmalate dehydratase; homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein YP_004091218.1 KEGG: cth:Cthe_2519 putative alpha-isopropylmalate/homocitrate synthase family transferase; TIGRFAM: 2-isopropylmalate synthase/homocitrate synthase family protein; PFAM: LeuA allosteric (dimerisation) domain-containing protein; pyruvate carboxyltransferase YP_004091219.1 KEGG: amt:Amet_3400 acetolactate synthase, large subunit, biosynthetic type; TIGRFAM: acetolactate synthase, large subunit, biosynthetic type; PFAM: thiamine pyrophosphate TPP-binding domain-containing protein; thiamine pyrophosphate central domain-containing protein YP_004091220.1 PFAM: Abortive phage infection; KEGG: oih:OB3329 hypothetical protein YP_004091221.1 KEGG: pde:Pden_1785 helix-turn-helix domain-containing protein YP_004091222.1 KEGG: abo:ABO_0619 hypothetical protein YP_004091223.1 KEGG: tcr:506295.30 hypothetical protein YP_004091224.1 KEGG: dhd:Dhaf_1747 transcriptional regulator, MarR family; PFAM: regulatory protein MarR; SMART: regulatory protein MarR YP_004091225.1 PFAM: major facilitator superfamily MFS_1; KEGG: btk:BT9727_2222 multidrug resistance protein YP_004091226.1 KEGG: dhd:Dhaf_0599 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004091227.1 PFAM: isochorismatase hydrolase; KEGG: mav:MAV_5193 isochorismatase family protein YP_004091228.1 KEGG: cby:CLM_2628 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004091229.1 PFAM: Resolvase domain; Recombinase; KEGG: tex:Teth514_0698 recombinase YP_004091230.1 KEGG: bvi:Bcep1808_7206 transposase Tn3 family protein YP_004091231.1 PFAM: nitroreductase; KEGG: bbe:BBR47_32600 putative NAD(P)H nitroreductase YP_004091232.1 PFAM: helix-turn-helix HxlR type; KEGG: amu:Amuc_0684 transcriptional regulator, HxlR family YP_004091233.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004091234.1 PFAM: Integrase catalytic region; KEGG: mac:MA3759 transposase YP_004091235.1 KEGG: efa:EF2307 hypothetical protein YP_004091236.1 KEGG: efa:EF2306 hypothetical protein YP_004091237.1 KEGG: ame:724634 lava lamp YP_004091238.1 KEGG: ptm:GSPATT00030432001 hypothetical protein YP_004091239.1 PFAM: Methyltransferase type 11; KEGG: clo:HMPREF0868_1113 methyltransferase domain protein YP_004091240.1 KEGG: apv:Apar_1268 beta-lactamase domain protein YP_004091241.1 KEGG: dsy:DSY3419 hypothetical protein YP_004091242.1 KEGG: cth:Cthe_1907 amino acid adenylation domain-containing protein YP_004091243.1 KEGG: sna:Snas_5283 radical SAM domain-containing protein YP_004091244.1 KEGG: ade:Adeh_0291 AAA ATPase; PFAM: AAA ATPase central domain protein; SMART: AAA ATPase YP_004091245.1 KEGG: cbe:Cbei_3809 hypothetical protein YP_004091246.1 PFAM: restriction endonuclease; KEGG: sfu:Sfum_2534 restriction endonuclease YP_004091247.1 KEGG: ere:EUBREC_0650 DNA helicase YP_004091248.1 KEGG: efa:EF2306 hypothetical protein YP_004091249.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004091250.1 PFAM: glycosyl transferase family 25; KEGG: mag:amb4521 hypothetical protein YP_004091251.1 PFAM: PEBP family protein; KEGG: sae:NWMN_0849 hypothetical protein YP_004091252.1 PFAM: SUA5/yciO/yrdC domain; KEGG: sae:NWMN_0848 hypothetical protein YP_004091253.1 KEGG: dsy:DSY3291 hypothetical protein YP_004091254.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004091255.1 manually curated; KEGG: dsy:DSY3417 hypothetical protein YP_004091256.1 KEGG: sar:SAR0940 hypothetical protein; PFAM: pyruvate carboxyltransferase YP_004091257.1 PFAM: regulatory protein LysR; LysR substrate-binding; KEGG: sad:SAAV_0936 LysR family transcriptional regulator YP_004091258.1 KEGG: swo:Swol_0936 regulator of arsenical resistance; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004091259.1 KEGG: gur:Gura_0480 CO dehydrogenase/acetyl-CoA synthase gamma subunit (corrinoid Fe-S protein)-like protein YP_004091260.1 KEGG: mpd:MCP_0717 ferredoxin YP_004091261.1 KEGG: swo:Swol_0939 hypothetical protein; TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter YP_004091262.1 KEGG: esi:Exig_1425 FAD-dependent pyridine nucleotide-disulphide oxidoreductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; pyridine nucleotide-disulphide oxidoreductase dimerisation region; Rhodanese domain protein; SMART: Rhodanese domain protein YP_004091263.1 KEGG: dhd:Dhaf_0527 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_004091264.1 KEGG: dhd:Dhaf_0526 transcriptional regulator, AraC family; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004091265.1 KEGG: dhd:Dhaf_0599 transcriptional regulator, XRE family YP_004091266.1 PFAM: Heavy metal transport/detoxification protein; KEGG: sad:SAAV_2624 copper ion binding protein YP_004091267.1 KEGG: mhu:Mhun_0418 PKD YP_004091268.1 KEGG: azl:AZL_e00660 filamentous haemagglutinin outer membrane protein YP_004091269.1 KEGG: nfi:NFIA_058140 hypothetical protein YP_004091270.1 KEGG: bmq:BMQ_2270 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091271.1 KEGG: ldb:Ldb1713 hypothetical protein YP_004091272.1 KEGG: fjo:Fjoh_3952 hypothetical protein YP_004091273.1 PFAM: Ig domain protein group 2 domain protein; KEGG: ang:An01g07790 hypothetical protein YP_004091274.1 PFAM: transport system permease protein; KEGG: ckr:CKR_1584 hypothetical protein YP_004091275.1 PFAM: periplasmic binding protein; KEGG: mta:Moth_1419 periplasmic binding protein YP_004091276.1 KEGG: ckr:CKR_0963 hypothetical protein YP_004091277.1 KEGG: cth:Cthe_1848 copper-translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; copper-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004091278.1 KEGG: mmu:100046990 similar to dentin sialophosphoprotein YP_004091279.1 PFAM: cytochrome c biogenesis protein transmembrane region; KEGG: cbe:Cbei_2960 cytochrome c biogenesis protein, transmembrane region YP_004091280.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: dhd:Dhaf_2283 alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen YP_004091281.1 PFAM: transport system permease protein; KEGG: ckr:CKR_1584 hypothetical protein YP_004091282.1 KEGG: dwi:Dwil_GK12566 GK12566 gene product from transcript GK12566-RA YP_004091283.1 manually curated; KEGG: kpe:KPK_4939 hypothetical protein YP_004091284.1 KEGG: dsy:DSY3090 hypothetical protein YP_004091285.1 KEGG: dhd:Dhaf_4261 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091286.1 PFAM: cobalamin synthesis protein P47K; KEGG: dhd:Dhaf_4262 cobalamin synthesis protein P47K YP_004091287.1 PFAM: transport system permease protein; KEGG: mta:Moth_1424 transport system permease protein YP_004091288.1 KEGG: dsy:DSY3090 hypothetical protein YP_004091289.1 PFAM: periplasmic binding protein; KEGG: dsy:DSY3095 hypothetical protein YP_004091290.1 KEGG: cno:NT01CX_0659 pyruvate carboxylase; TIGRFAM: pyruvate carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; pyruvate carboxyltransferase; Conserved carboxylase region; biotin/lipoyl attachment domain-containing protein YP_004091291.1 TIGRFAM: diguanylate cyclase; PAS sensor protein; PFAM: EAL domain protein; GGDEF domain containing protein; PAS fold-3 domain protein; KEGG: cdf:CD1476 putative signaling protein; SMART: EAL domain protein; GGDEF domain containing protein; PAC repeat-containing protein YP_004091292.1 KEGG: cbe:Cbei_4835 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein YP_004091293.1 PFAM: ATPase-like, ParA/MinD; KEGG: ckr:CKR_3226 hypothetical protein YP_004091294.1 KEGG: nve:NEMVE_v1g247227 hypothetical protein YP_004091295.1 KEGG: ckr:CKR_1773 hypothetical protein YP_004091296.1 KEGG: dhd:Dhaf_0657 hypothetical protein YP_004091297.1 PFAM: isochorismatase hydrolase; KEGG: tro:trd_A0009 isochorismatase (2,3 dihydro-2,3 dihydroxybenzoatesynthase) (superoxide-inducible protein 1) (SOI1) YP_004091298.1 KEGG: pto:PTO0671 isochorismatase; PFAM: regulatory protein MerR; isochorismatase hydrolase; SMART: regulatory protein MerR YP_004091299.1 PFAM: Polyketide cyclase/dehydrase; KEGG: ppa:PAS_chr2-2_0082 hypothetical protein YP_004091300.1 KEGG: cth:Cthe_0312 ATPase AAA-2; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp ATPase-like; SMART: AAA ATPase YP_004091301.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cce:Ccel_1463 CDP-alcohol phosphatidyltransferase YP_004091302.1 KEGG: cce:Ccel_0301 hypothetical protein YP_004091303.1 KEGG: ere:EUBREC_0336 hypothetical protein YP_004091304.1 KEGG: tte:TTE2258 tRNA pseudouridine synthase A; TIGRFAM: tRNA pseudouridine synthase A; PFAM: Pseudouridine synthase I, TruA, alpha/beta domain YP_004091305.1 PFAM: cobalt transport protein; KEGG: cbi:CLJ_B3756 cobalt transport permease, CbiQ family YP_004091306.1 KEGG: cno:NT01CX_1147 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091307.1 KEGG: cno:NT01CX_1146 cobalt transporter ATP-binding subunit; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091308.1 KEGG: cpy:Cphy_3671 hypothetical protein YP_004091309.1 KEGG: cth:Cthe_1163 phosphoglucosamine mutase; TIGRFAM: phosphoglucosamine mutase; PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; phosphoglucomutase/phosphomannomutase YP_004091310.1 TIGRFAM: Holliday junction DNA helicase RuvB; PFAM: AAA ATPase central domain protein; Holliday junction DNA helicase RuvB domain; KEGG: tjr:TherJR_1182 Holliday junction DNA helicase RuvB; SMART: AAA ATPase YP_004091311.1 KEGG: cth:Cthe_0181 Holliday junction DNA helicase RuvA; TIGRFAM: Holliday junction DNA helicase RuvA; PFAM: DNA recombination protein RuvA domain I; RuvA domain protein YP_004091312.1 TIGRFAM: crossover junction endodeoxyribonuclease RuvC; KEGG: cth:Cthe_0180 Holliday junction resolvase; PFAM: Crossover junction endodeoxyribonuclease RuvC YP_004091313.1 KEGG: dhd:Dhaf_2770 dipeptidase; TIGRFAM: dipeptidase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004091314.1 PFAM: PP-loop domain protein; KEGG: cpy:Cphy_0182 PP-loop domain-containing protein YP_004091316.1 KEGG: nth:Nther_1810 sporulation protein YunB; TIGRFAM: sporulation protein YunB; PFAM: Sporulation protein YunB-like YP_004091317.1 PFAM: regulatory protein TetR; KEGG: cbe:Cbei_4920 TetR family transcriptional regulator YP_004091318.1 PFAM: NADPH-dependent FMN reductase; KEGG: mst:Msp_1469 iron-sulfur flavoprotein YP_004091319.1 KEGG: cdl:CDR20291_0860 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004091320.1 KEGG: ere:EUBREC_2731 putative sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004091321.1 KEGG: ctc:CTC01419 transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091322.1 PFAM: protein of unknown function DUF214; KEGG: clj:CLJU_c07690 putative ABC transporter permease YP_004091323.1 KEGG: gyc:GYMC61_1755 oligoendopeptidase, M3 family; TIGRFAM: oligoendopeptidase, M3 family; PFAM: peptidase M3A and M3B thimet/oligopeptidase F YP_004091324.1 SMART: NAD-dependent DNA ligase ; Helix-hairpin-helix DNA-binding class 1; BRCT domain protein; TIGRFAM: DNA ligase, NAD-dependent; KEGG: cth:Cthe_1035 DNA ligase, NAD-dependent; PFAM: NAD-dependent DNA ligase adenylation; NAD-dependent DNA ligase OB-fold; BRCT domain protein YP_004091325.1 KEGG: tte:TTE0606 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_004091326.1 TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; KEGG: afl:Aflv_0259 aspartyl/glutamyl-tRNA amidotransferase subunit A; PFAM: Amidase YP_004091327.1 KEGG: cth:Cthe_1031 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase YP_004091328.1 TIGRFAM: nicotinate phosphoribosyltransferase; KEGG: cth:Cthe_1177 nicotinate phosphoribosyltransferase; PFAM: Nicotinate phosphoribosyltransferase-like YP_004091329.1 PFAM: Methyltransferase type 11; KEGG: bcz:BCZK1169 methyltransferase YP_004091330.1 PFAM: glycosyl transferase family 2; KEGG: pjd:Pjdr2_6103 glycosyl transferase family 2 YP_004091331.1 KEGG: clj:CLJU_c35420 putative RNA helicase; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; DbpA RNA-binding domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004091332.1 KEGG: ele:Elen_1556 DegV family protein; TIGRFAM: degV family protein; PFAM: DegV family protein YP_004091333.1 KEGG: cbk:CLL_A3270 cation efflux family protein; TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein YP_004091334.1 KEGG: cth:Cthe_1288 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004091335.1 KEGG: cce:Ccel_1891 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase HAMP region domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004091336.1 KEGG: mgr:MGG_01973 hypothetical protein YP_004091337.1 manually curated; TIGRFAM: ribosomal protein L31; KEGG: tde:TDE1504 50S ribosomal protein L31; PFAM: ribosomal protein L31 YP_004091338.1 PFAM: Uncharacterised protein family UPF0029, Impact, N-terminal; Uncharacterised protein family UPF0029, Impact, C-terminal; KEGG: tbi:Tbis_1716 hypothetical protein YP_004091339.1 KEGG: mta:Moth_1706 cysteine synthase; TIGRFAM: cysteine synthase A; cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004091340.1 TIGRFAM: deoxyguanosinetriphosphate triphosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: dau:Daud_0490 deoxyguanosinetriphosphate triphosphohydrolase-like protein; SMART: metal-dependent phosphohydrolase HD region YP_004091341.1 TIGRFAM: DNA primase; PFAM: DNA primase catalytic core domain; TOPRIM domain-containing protein; DNA primase, DnaB-helicase binding domain; KEGG: cth:Cthe_0896 DNA primase; SMART: Toprim sub domain-containing protein YP_004091342.1 KEGG: cce:Ccel_0541 RNA polymerase sigma factor RpoD; TIGRFAM: RNA polymerase sigma factor RpoD; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 3 domain protein; sigma-70 region 2 domain protein; sigma-70 region 1.2; sigma-70 1.1 domain protein; sigma-70 region 4 domain protein YP_004091343.1 KEGG: ctc:CTC00575 hypothetical protein; TIGRFAM: transcriptional regulator, Rrf2 family; PFAM: protein of unknown function UPF0074 YP_004091344.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: maq:Maqu_3592 rubredoxin-type Fe(Cys)4 protein YP_004091345.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: cac:CA_C2449 flavoprotein YP_004091346.1 KEGG: cce:Ccel_1464 hypothetical protein YP_004091347.1 KEGG: clj:CLJU_c02780 hypothetical protein; PFAM: heat shock protein DnaJ domain protein; SMART: heat shock protein DnaJ domain protein YP_004091348.1 KEGG: ckr:CKR_3182 hypothetical protein YP_004091349.1 PFAM: Ferritin Dps family protein; KEGG: dhd:Dhaf_2260 ferritin Dps family protein YP_004091350.1 KEGG: mev:Metev_1037 heavy metal translocating P-type ATPase; TIGRFAM: copper ion binding protein; PFAM: Heavy metal transport/detoxification protein YP_004091351.1 KEGG: cce:Ccel_0746 copper-translocating P-type ATPase; TIGRFAM: copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004091353.1 KEGG: cce:Ccel_0312 DNA-directed RNA polymerase subunit beta; TIGRFAM: DNA-directed RNA polymerase, beta subunit; PFAM: RNA polymerase Rpb2 domain 6; RNA polymerase beta subunit; RNA polymerase Rpb2 domain 2; RNA polymerase Rpb2 domain 3; DNA-directed RNA polymerase, beta subunit, external 1 domain; RNA polymerase Rpb2 domain 7 YP_004091354.1 TIGRFAM: DNA-directed RNA polymerase, beta' subunit; PFAM: RNA polymerase Rpb1 domain 1; RNA polymerase alpha subunit; RNA polymerase Rpb1 domain 3; ribosomal protein S3- domain protein; RNA polymerase Rpb1 domain 4; RNA polymerase Rpb1 domain 5; KEGG: cce:Ccel_0313 DNA-directed RNA polymerase subunit beta'; SMART: RNA polymerase I subunit A domain protein YP_004091355.1 KEGG: cce:Ccel_0315 30S ribosomal protein S12; TIGRFAM: ribosomal protein S12; PFAM: ribosomal protein S12/S23 YP_004091356.1 manually curated; TIGRFAM: ribosomal protein S7; KEGG: cce:Ccel_0316 30S ribosomal protein S7; PFAM: ribosomal protein S7 YP_004091357.1 KEGG: cth:Cthe_2729 elongation factor G; TIGRFAM: translation elongation factor G; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain IV; elongation factor G domain-containing protein YP_004091358.1 KEGG: ate:Athe_0810 elongation factor Tu; TIGRFAM: translation elongation factor Tu; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor Tu domain-containing protein YP_004091359.1 KEGG: spo:SPBC1683.03c membrane transporter YP_004091360.1 PFAM: PemK family protein; KEGG: cth:Cthe_2699 transcriptional modulator of MazE/toxin, MazF YP_004091361.1 KEGG: mta:Moth_1783 hypothetical protein YP_004091362.1 KEGG: amt:Amet_0905 coat F domain-containing protein YP_004091363.1 KEGG: afn:Acfer_1456 HAD-superfamily hydrolase, subfamily IIA; TIGRFAM: HAD-superfamily hydrolase, subfamily IIA; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004091364.1 KEGG: sdl:Sdel_1932 HAD-superfamily hydrolase, subfamily IA, variant 1; TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase YP_004091365.1 PFAM: protein of unknown function DUF1294; KEGG: bse:Bsel_1373 protein of unknown function DUF1294 YP_004091366.1 KEGG: gct:GC56T3_0089 RNA polymerase, sigma-24 subunit, ECF subfamily; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein YP_004091367.1 KEGG: ate:Athe_1830 hypothetical protein YP_004091368.1 PFAM: Domain of unknown function DUF1858; KEGG: cce:Ccel_2420 hypothetical protein YP_004091369.1 PFAM: protein of unknown function DUF633; KEGG: sez:Sez_1241 putative tRNA-m1A22 methylase YP_004091370.1 PFAM: protein of unknown function DUF34; KEGG: rmr:Rmar_1841 protein of unknown function DUF34 YP_004091371.1 PFAM: Fibronectin-binding A domain protein; protein of unknown function DUF814; KEGG: cdf:CD2592 fibronectin-binding protein YP_004091372.1 PFAM: GCN5-related N-acetyltransferase; KEGG: spp:SPP_0956 acetyltransferase, GNAT family YP_004091373.1 PFAM: GCN5-related N-acetyltransferase; KEGG: tex:Teth514_0335 GCN5-related N-acetyltransferase YP_004091374.1 PFAM: Peptidase M23; KEGG: cce:Ccel_0884 peptidase M23 YP_004091375.1 KEGG: cyh:Cyan8802_1005 protein of unknown function DUF470 YP_004091376.1 PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: clj:CLJU_c25240 fumarylacetoacetate hydrolase family protein YP_004091377.1 KEGG: ate:Athe_0528 hypothetical protein YP_004091378.1 KEGG: cce:Ccel_2610 hypothetical protein YP_004091379.1 KEGG: clj:CLJU_c22280 putative cell wall-binding protein YP_004091380.1 KEGG: mma:MM_0540 hypothetical protein; manually curated; PFAM: metallophosphoesterase YP_004091381.1 PFAM: glutamine synthetase catalytic region; KEGG: cbe:Cbei_0444 glutamine synthetase, catalytic region YP_004091382.1 KEGG: ere:EUBREC_1167 aspartyl-tRNA synthetase, non-discriminating; TIGRFAM: aspartyl-tRNA synthetase; PFAM: tRNA synthetase class II (D K and N); nucleic acid binding OB-fold tRNA/helicase-type YP_004091383.1 KEGG: cth:Cthe_1031 aspartyl/glutamyl-tRNA amidotransferase subunit B; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, B subunit; PFAM: GatB region; Asn/Gln amidotransferase YP_004091384.1 KEGG: cth:Cthe_1032 aspartyl/glutamyl-tRNA amidotransferase subunit A; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, A subunit; PFAM: Amidase YP_004091385.1 KEGG: cth:Cthe_1033 aspartyl/glutamyl-tRNA amidotransferase subunit C; TIGRFAM: glutamyl-tRNA(Gln) amidotransferase, C subunit; PFAM: Glu-tRNAGln amidotransferase C subunit YP_004091386.1 KEGG: cth:Cthe_0809 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004091387.1 PFAM: Integral membrane protein TerC; KEGG: cac:CA_C1039 membrane protein, TerC-like protein YP_004091388.1 KEGG: ele:Elen_0572 hypothetical protein YP_004091389.1 KEGG: ckr:CKR_1488 hypothetical protein; TIGRFAM: ferrous iron transport protein B; small GTP-binding protein; PFAM: Ferrous iron transport protein B domain-containing protein; GTP-binding protein HSR1-related; nucleoside recognition domain protein; Ferrous iron transport B domain-containing protein YP_004091390.1 PFAM: FeoA family protein; KEGG: dhd:Dhaf_3460 FeoA family protein YP_004091391.1 PFAM: FeoA family protein; KEGG: dhd:Dhaf_3461 FeoA family protein YP_004091392.1 KEGG: cpy:Cphy_3783 cell envelope-related transcriptional attenuator; TIGRFAM: cell envelope-related function transcriptional attenuator, LytR/CpsA family; PFAM: cell envelope-related transcriptional attenuator YP_004091393.1 KEGG: bcb:BCB4264_A5394 glucosyltransferase EpsB; PFAM: sugar transferase YP_004091394.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: cbh:CLC_2221 short chain dehydrogenase/reductase family oxidoreductase YP_004091395.1 PFAM: protein of unknown function DUF1292; KEGG: cth:Cthe_0154 hypothetical protein YP_004091396.1 PFAM: protein of unknown function DUF81; KEGG: tjr:TherJR_1330 protein of unknown function DUF81 YP_004091397.1 PFAM: protein of unknown function DUF81; KEGG: cce:Ccel_2539 hypothetical protein YP_004091398.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_1959 LysR family transcriptional regulator YP_004091399.1 PFAM: Methyltransferase type 11; KEGG: cpc:Cpar_0822 methyltransferase type 11 YP_004091400.1 PFAM: OsmC family protein; KEGG: cac:CA_C2245 stress-induced protein OsmC YP_004091401.1 PFAM: Methyltransferase type 12; KEGG: mac:MA4204 hypothetical protein YP_004091402.1 KEGG: cbe:Cbei_1301 membrane associated protein YP_004091403.1 KEGG: cbe:Cbei_1736 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004091404.1 PFAM: protein of unknown function DUF347; KEGG: cai:Caci_8898 protein of unknown function DUF347 YP_004091405.1 KEGG: tte:TTE1017 sensory transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004091406.1 KEGG: tte:TTE1016 response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004091407.1 PFAM: Bacitracin resistance protein BacA; KEGG: ooe:OEOE_1821 undecaprenyl-diphosphatase YP_004091408.1 PFAM: ABC-2 type transporter; KEGG: ckr:CKR_2155 hypothetical protein YP_004091409.1 TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: amt:Amet_0234 ABC transporter related; SMART: AAA ATPase YP_004091410.1 KEGG: dae:Dtox_2730 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004091411.1 KEGG: dsy:DSY3866 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004091412.1 manually curated; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; KEGG: lsg:lse_0630 cation transport ATPase, E1-E2 family; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004091413.1 PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 IS200 family transposase YP_004091414.1 KEGG: lbr:LVIS_0116 cation transport ATPase YP_004091415.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: nth:Nther_0748 integral membrane sensor signal transduction histidine kinase YP_004091416.1 KEGG: gym:GYMC10_0376 two component transcriptional regulator, LuxR family; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004091417.1 PFAM: protein of unknown function DUF214; KEGG: cce:Ccel_1152 protein of unknown function DUF214 YP_004091418.1 KEGG: cpy:Cphy_3632 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091419.1 PFAM: protein of unknown function DUF214; KEGG: cpy:Cphy_3633 hypothetical protein YP_004091420.1 PFAM: UvrD/REP helicase; KEGG: cth:Cthe_2876 ATP-dependent DNA helicase PcrA YP_004091421.1 KEGG: pmo:Pmob_1523 HhH-GPD family protein; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein YP_004091422.1 KEGG: csc:Csac_2448 RND family efflux transporter MFP subunit; TIGRFAM: efflux transporter, RND family, MFP subunit; PFAM: biotin/lipoyl attachment domain-containing protein YP_004091423.1 KEGG: ate:Athe_2297 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091424.1 PFAM: protein of unknown function DUF214; KEGG: cac:CA_C0320 permease YP_004091425.1 KEGG: clj:CLJU_c15900 hypothetical protein YP_004091426.1 KEGG: clj:CLJU_c26720 asparagine synthetase; TIGRFAM: asparagine synthase (glutamine-hydrolyzing); PFAM: asparagine synthase; glutamine amidotransferase class-II YP_004091427.1 TIGRFAM: phosphoribosylformylglycinamidine synthase; KEGG: cce:Ccel_0499 phosphoribosylformylglycinamidine synthase; PFAM: AIR synthase related protein domain protein YP_004091428.1 TIGRFAM: MiaB-like tRNA modifying enzyme; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: tte:TTE0962 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB YP_004091429.1 KEGG: cth:Cthe_0149 HPrNtr domain-containing protein YP_004091430.1 KEGG: ate:Athe_1559 serine-type D-Ala-D-Ala carboxypeptidase; PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein YP_004091431.1 KEGG: bpf:BpOF4_04585 glucose-6-phosphate isomerase; PFAM: phosphoglucose isomerase (PGI) YP_004091432.1 KEGG: ere:EUBREC_1736 hypothetical protein YP_004091433.1 PFAM: protein of unknown function DUF177; KEGG: cno:NT01CX_2223 hypothetical protein YP_004091434.1 KEGG: afn:Acfer_1398 ribosomal protein L32; TIGRFAM: ribosomal protein L32; PFAM: ribosomal L32p protein YP_004091435.1 PFAM: protein of unknown function DUF512; KEGG: cth:Cthe_1025 hypothetical protein YP_004091436.1 TIGRFAM: ribosome-associated GTPase EngA; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KEGG: cth:Cthe_1024 GTP-binding protein EngA; SMART: AAA ATPase YP_004091437.1 PFAM: protein of unknown function DUF205; KEGG: cdl:CDR20291_2519 hypothetical protein YP_004091438.1 PFAM: NAD-dependent glycerol-3-phosphate dehydrogenase domain protein; KEGG: dsy:DSY2249 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_004091439.1 KEGG: cdi:DIP1700 glucosamine--fructose-6-phosphate aminotransferase YP_004091440.1 KEGG: cyh:Cyan8802_1482 FHA domain containing protein YP_004091442.1 PFAM: protein of unknown function DUF421; KEGG: cbl:CLK_0476 hypothetical protein YP_004091443.1 PFAM: O-antigen polymerase; KEGG: snc:HMPREF0837_12122 hypothetical protein YP_004091444.1 KEGG: amt:Amet_0272 hypothetical protein YP_004091445.1 KEGG: sbm:Shew185_2895 putative acetyltransferase YP_004091446.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cth:Cthe_2579 iron-containing alcohol dehydrogenase YP_004091447.1 KEGG: cbe:Cbei_1938 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091448.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_1939 binding-protein-dependent transport systems inner membrane component YP_004091449.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbe:Cbei_1940 binding-protein-dependent transport systems inner membrane component YP_004091450.1 KEGG: cbe:Cbei_1941 NMT1/THI5-like protein YP_004091451.1 PFAM: protein of unknown function DUF523; KEGG: shm:Shewmr7_0317 hypothetical protein YP_004091452.1 PFAM: purine catabolism PurC domain protein; KEGG: ckr:CKR_2760 hypothetical protein YP_004091453.1 KEGG: clj:CLJU_c35890 D-hydantoinase; TIGRFAM: dihydropyrimidinase; PFAM: amidohydrolase YP_004091454.1 KEGG: lrf:LAR_1242 putative oxidoreductase YP_004091455.1 TIGRFAM: dihydroorotate dehydrogenase family protein; KEGG: ckr:CKR_2115 dihydropyrimidine dehydrogenase; PFAM: dihydroorotate oxidase YP_004091456.1 PFAM: aminotransferase class-III; KEGG: cbe:Cbei_1936 aminotransferase class-III YP_004091457.1 TIGRFAM: amidase, hydantoinase/carbamoylase family; KEGG: cbe:Cbei_1944 allantoate amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004091458.1 KEGG: sgo:SGO_0107 LPXTG cell wall surface protein YP_004091459.1 PFAM: transcriptional regulator domain-containing protein; transcriptional activator domain; KEGG: shi:Shel_24290 DNA-binding transcriptional activator of the SARP family YP_004091460.1 KEGG: clj:CLJU_c32910 hypothetical protein YP_004091461.1 KEGG: clj:CLJU_c32920 hypothetical protein YP_004091462.1 PFAM: transcriptional regulator PadR family protein; KEGG: clj:CLJU_c32930 putative transcriptional regulator YP_004091463.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tmt:Tmath_0906 serine-type D-Ala-D-Ala carboxypeptidase YP_004091464.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: swo:Swol_1191 putative transcriptional regulator YP_004091465.1 PFAM: protein of unknown function DUF1003; KEGG: cbb:CLD_0468 hypothetical protein YP_004091466.1 KEGG: cth:Cthe_2745 hypothetical protein YP_004091467.1 PFAM: nucleoside recognition domain protein; KEGG: hmo:HM1_2156 hypothetical protein YP_004091468.1 KEGG: cth:Cthe_1073 hypothetical protein YP_004091469.1 KEGG: tit:Thit_0917 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: stage IV sporulation YqfD YP_004091470.1 PFAM: PhoH family protein; KEGG: tte:TTE0970 phosphate starvation-inducible protein PhoH, ATPase YP_004091471.1 PFAM: protein of unknown function UPF0054; KEGG: tte:TTE0972 putative metalloprotease YP_004091472.1 PFAM: diacylglycerol kinase; KEGG: amt:Amet_3030 diacylglycerol kinase YP_004091473.1 KEGG: cce:Ccel_0579 GTP-binding protein Era; TIGRFAM: GTP-binding protein Era; small GTP-binding protein; PFAM: GTP-binding protein HSR1-related; KH type 2 domain protein YP_004091474.1 KEGG: cre:CHLREDRAFT_149734 hypothetical protein YP_004091475.1 KEGG: cth:Cthe_1066 DNA replication and repair protein RecO; TIGRFAM: DNA repair protein RecO; PFAM: Recombination protein O RecO YP_004091476.1 KEGG: aoe:Clos_0639 glycosyl transferase family protein YP_004091477.1 PFAM: Collagen triple helix repeat-containing protein; KEGG: bcb:BCB4264_A3360 hypothetical protein YP_004091478.1 KEGG: cth:Cthe_0156 radical SAM family protein; PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004091479.1 PFAM: Protein of unknown function DUF2344; KEGG: dau:Daud_1454 hypothetical protein YP_004091480.1 PFAM: glycoside hydrolase family 25; KEGG: cac:CA_C2621 cell wall hydrolase; SMART: Glycoside hydrolase, family 25 subgroup YP_004091481.1 KEGG: sth:STH1862 stage III sporulation protein AA; TIGRFAM: stage III sporulation protein AA; SMART: AAA ATPase YP_004091482.1 PFAM: Sporulation stage III protein AB; KEGG: dae:Dtox_2610 stage III sporulation protein SpoAB YP_004091483.1 TIGRFAM: stage III sporulation protein AC; KEGG: amt:Amet_2494 stage III sporulation AC family protein YP_004091484.1 KEGG: hmo:HM1_0277 stage III sporulation protein ad, putative YP_004091485.1 PFAM: Sporulation stage III protein AE; KEGG: cce:Ccel_1912 stage III sporulation protein AE YP_004091486.1 KEGG: bwe:BcerKBAB4_4041 sporulation stage III protein AF YP_004091487.1 KEGG: tex:Teth514_1531 hypothetical protein YP_004091488.1 KEGG: dae:Dtox_2604 hypothetical protein YP_004091489.1 PFAM: protein of unknown function DUF322; KEGG: cce:Ccel_1908 protein of unknown function DUF322 YP_004091490.1 KEGG: cno:NT01CX_1978 transcription antitermination protein NusB; TIGRFAM: transcription antitermination factor NusB; PFAM: NusB/RsmB/TIM44 YP_004091491.1 PFAM: peptidase M22 glycoprotease; KEGG: slp:Slip_0428 peptidase M22 glycoprotease YP_004091492.1 KEGG: cce:Ccel_1904 exodeoxyribonuclease VII, large subunit; TIGRFAM: exodeoxyribonuclease VII, large subunit; PFAM: Exonuclease VII, large subunit-like; nucleic acid binding OB-fold tRNA/helicase-type YP_004091493.1 KEGG: dsh:Dshi_3296 exodeoxyribonuclease 7 small subunit; TIGRFAM: exodeoxyribonuclease VII, small subunit; PFAM: Exonuclease VII small subunit YP_004091494.1 PFAM: Polyprenyl synthetase; KEGG: cth:Cthe_0831 farnesyl-diphosphate synthase YP_004091495.1 PFAM: acid phosphatase/vanadium-dependent haloperoxidase related; KEGG: lla:L26878 hypothetical protein YP_004091496.1 KEGG: bts:Btus_0740 deoxyxylulose-5-phosphate synthase; TIGRFAM: deoxyxylulose-5-phosphate synthase; PFAM: transketolase central region; transketolase domain-containing protein YP_004091497.1 TIGRFAM: hemolysin A; PFAM: RNA-binding S4 domain protein; ribosomal RNA methyltransferase RrmJ/FtsJ; KEGG: eel:EUBELI_01083 putative hemolysin; SMART: RNA-binding S4 domain protein YP_004091498.1 PFAM: ATP-NAD/AcoX kinase; KEGG: tpd:Teth39_1105 ATP-NAD/AcoX kinase YP_004091499.1 PFAM: Arginine repressor-like; KEGG: tte:TTE1301 arginine repressor YP_004091500.1 KEGG: cce:Ccel_1896 DNA repair protein RecN; TIGRFAM: DNA repair protein RecN; PFAM: SMC domain protein YP_004091501.1 SMART: RNA-binding S4 domain protein; TIGRFAM: tyrosyl-tRNA synthetase; KEGG: ere:EUBREC_0190 tyrosyl-tRNA synthetase; PFAM: aminoacyl-tRNA synthetase class Ib; RNA-binding S4 domain protein YP_004091502.1 manually curated; KEGG: bay:RBAM_005300 hypothetical protein YP_004091503.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_3466 LysR family transcriptional regulator YP_004091504.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bay:RBAM_030000 YusR YP_004091505.1 KEGG: mdo:100021983 hypothetical protein LOC100021983 YP_004091506.1 SMART: SH3 domain protein; KEGG: cpr:CPR_B0001 bacteriocin YP_004091507.1 KEGG: cbe:Cbei_4388 hypothetical protein YP_004091508.1 KEGG: cbe:Cbei_4388 hypothetical protein YP_004091509.1 manually curated; KEGG: bay:RBAM_006490 YkuG YP_004091510.1 KEGG: cbe:Cbei_4388 hypothetical protein YP_004091511.1 KEGG: cbe:Cbei_4388 hypothetical protein YP_004091512.1 KEGG: cpf:CPF_0606 cell wall binding repeat-containing protein/zinc carboxypeptidase family protein YP_004091513.1 KEGG: cbe:Cbei_4388 hypothetical protein YP_004091514.1 KEGG: dsy:DSY3417 hypothetical protein YP_004091515.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004091516.1 KEGG: dsy:DSY3291 hypothetical protein YP_004091517.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004091518.1 PFAM: Integrase catalytic region; KEGG: mac:MA3759 transposase YP_004091519.1 KEGG: mru:mru_1429 DNA mismatch endonuclease Vsr; TIGRFAM: DNA mismatch endonuclease Vsr; PFAM: DNA mismatch endonuclease vsr YP_004091520.1 PFAM: Restriction endonuclease, type II, LlaJI; KEGG: gva:HMPREF0424_0537 LlaJI restriction endonuclease YP_004091521.1 PFAM: ATPase associated with various cellular activities AAA_5; KEGG: gva:HMPREF0424_0536 ATPase family associated with various cellular activities (AAA) YP_004091522.1 TIGRFAM: DNA-cytosine methyltransferase; KEGG: bcg:BCG9842_B4337 cytosine-specific methyltransferase NlaX; PFAM: C-5 cytosine-specific DNA methylase YP_004091523.1 KEGG: bcg:BCG9842_B4338 modification methylase DdeI; TIGRFAM: DNA-cytosine methyltransferase; PFAM: C-5 cytosine-specific DNA methylase YP_004091524.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: gva:HMPREF0424_0533 DNA binding domain, excisionase family YP_004091525.1 PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 IS200 family transposase YP_004091526.1 KEGG: pnu:Pnuc_1118 SMC domain-containing protein YP_004091527.1 KEGG: pnu:Pnuc_1117 hypothetical protein YP_004091528.1 KEGG: aco:Amico_1132 hypothetical protein YP_004091529.1 manually curated; KEGG: dae:Dtox_2227 RNA polymerase, sigma-24 subunit, ECF subfamily YP_004091530.1 PFAM: protein of unknown function UPF0027; KEGG: dsy:DSY1431 hypothetical protein YP_004091531.1 KEGG: dya:Dyak_GE13776 GE13776 gene product from transcript GE13776-RA YP_004091532.1 KEGG: bbe:BBR47_03130 hypothetical protein YP_004091533.1 KEGG: ate:Athe_2404 hypothetical protein YP_004091534.1 KEGG: cac:CA_C3386 hypothetical protein YP_004091535.1 KEGG: cac:CA_C3385 hypothetical protein YP_004091536.1 KEGG: tmt:Tmath_0743 hypothetical protein YP_004091537.1 KEGG: tpd:Teth39_1607 chromosome segregation ATPase-like protein YP_004091538.1 PFAM: Conserved hypothetical protein CHP02678; KEGG: tmt:Tmath_0741 hypothetical protein YP_004091539.1 PFAM: Conserved hypothetical protein CHP02677; KEGG: tex:Teth514_2248 hypothetical protein YP_004091540.1 KEGG: tex:Teth514_1217 hypothetical protein YP_004091541.1 PFAM: Protein of unknown function DUF1998; KEGG: aoe:Clos_2031 hypothetical protein YP_004091542.1 PFAM: helicase domain protein; KEGG: aoe:Clos_2032 helicase domain-containing protein YP_004091543.1 PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 IS200 family transposase YP_004091544.1 PFAM: Heat shock protein 70; KEGG: aoe:Clos_2034 heat shock protein 70 YP_004091545.1 KEGG: shn:Shewana3_4175 hypothetical protein YP_004091546.1 KEGG: ngr:NAEGRDRAFT_68304 hypothetical protein YP_004091547.1 PFAM: helix-turn-helix domain protein; KEGG: adg:Adeg_1995 transcriptional regulator, XRE family YP_004091548.1 manually curated; KEGG: drm:Dred_0025 ATPase YP_004091549.1 KEGG: ere:EUBREC_0390 hypothetical protein YP_004091550.1 KEGG: ere:EUBREC_0875 hypothetical protein YP_004091551.1 KEGG: dae:Dtox_3418 hypothetical protein YP_004091552.1 SMART: AAA ATPase; KEGG: mla:Mlab_0046 hypothetical protein YP_004091553.1 KEGG: bay:RBAM_005300 hypothetical protein YP_004091554.1 PFAM: arsenate reductase and related; KEGG: dhd:Dhaf_2269 arsenate reductase and related YP_004091555.1 PFAM: protein of unknown function DUF1697; KEGG: srt:Srot_1196 hypothetical protein YP_004091556.1 KEGG: cdl:CDR20291_0586 hypothetical protein YP_004091557.1 KEGG: clj:CLJU_c35100 hypothetical protein YP_004091558.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: dhd:Dhaf_3778 CDP-alcohol phosphatidyltransferase YP_004091559.1 KEGG: snc:HMPREF0837_10585 alkaline amylopullulanase YP_004091560.1 manually curated; KEGG: ate:Athe_1992 hypothetical protein YP_004091561.1 KEGG: dhd:Dhaf_0657 hypothetical protein YP_004091562.1 KEGG: afl:Aflv_1611 hypothetical protein YP_004091563.1 KEGG: dhd:Dhaf_4029 hypothetical protein YP_004091564.1 KEGG: rci:RRC174 putative ABC-type cobalt import system, ATPase component; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091565.1 KEGG: tte:TTE0247 ABC-type cobalt transport system, permease component CbiQ and related transporters; TIGRFAM: cobalt ABC transporter, inner membrane subunit CbiQ; PFAM: cobalt transport protein YP_004091566.1 PFAM: cobalamin (vitamin B12) biosynthesis CbiM protein; KEGG: mta:Moth_1863 cobalt transport protein CbiM YP_004091567.1 PFAM: 1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase; KEGG: cth:Cthe_0368 NCAIR mutase (PurE)-related protein YP_004091568.1 KEGG: cac:CA_C2026 flavodoxin YP_004091569.1 PFAM: CDP-alcohol phosphatidyltransferase; KEGG: cbe:Cbei_3473 CDP-alcohol phosphatidyltransferase YP_004091570.1 KEGG: hor:Hore_03990 flavodoxin YP_004091571.1 KEGG: ckr:CKR_2294 hypothetical protein YP_004091572.1 KEGG: cbi:CLJ_B1068 transcriptional regulator, TetR family; manually curated; PFAM: regulatory protein TetR YP_004091573.1 PFAM: regulatory protein TetR; KEGG: cbe:Cbei_3861 TetR family transcriptional regulator YP_004091574.1 KEGG: cce:Ccel_2159 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091575.1 KEGG: cce:Ccel_2158 putative ABC-2 type transport system permease protein YP_004091576.1 KEGG: cce:Ccel_2157 hypothetical protein YP_004091577.1 KEGG: cbb:CLD_2686 MOSC domain-containing protein; TIGRFAM: molybdenum cofactor biosynthesis protein C; PFAM: molybdopterin cofactor biosynthesis protein MoaC; MOSC domain containing protein YP_004091578.1 KEGG: ere:EUBREC_1014 cyclomaltodextrinase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004091579.1 PFAM: ABC-1 domain-containing protein; KEGG: tjr:TherJR_0922 ABC-1 domain protein YP_004091580.1 KEGG: ckr:CKR_0042 hypothetical protein YP_004091581.1 KEGG: aoe:Clos_2095 metal dependent phosphohydrolase; PFAM: metal-dependent phosphohydrolase HD sub domain; GAF domain protein; SMART: GAF domain protein; metal-dependent phosphohydrolase HD region YP_004091582.1 KEGG: gym:GYMC10_2739 putative sensor with HAMP domain protein YP_004091583.1 TIGRFAM: germination protein YpeB; KEGG: csc:Csac_2335 hypothetical protein YP_004091584.1 KEGG: tgo:TGME49_109400 chromosome segregation protein, putative YP_004091585.1 PFAM: glycoside hydrolase family 24; KEGG: cac:CA_P0151 integrin-like repeat-containing lysozyme YP_004091586.1 PFAM: CBS domain containing protein; KEGG: cno:NT01CX_0657 CBS domain-containing protein YP_004091587.1 PFAM: Conserved hypothetical protein CHP02453; KEGG: cce:Ccel_0076 hypothetical protein YP_004091588.1 KEGG: sgo:SGO_1510 LacX protein, aldolase 1 epimerase YP_004091589.1 KEGG: cbl:CLK_1350 hypothetical protein YP_004091590.1 PFAM: MscS Mechanosensitive ion channel; KEGG: pth:PTH_0619 small-conductance mechanosensitive channel YP_004091591.1 TIGRFAM: anthranilate synthase component I; KEGG: cth:Cthe_0875 anthranilate synthase, component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein YP_004091592.1 KEGG: cth:Cthe_0874 anthranilate synthase, component II; TIGRFAM: glutamine amidotransferase of anthranilate synthase; PFAM: glutamine amidotransferase class-I YP_004091593.1 TIGRFAM: anthranilate phosphoribosyltransferase; KEGG: cce:Ccel_3215 anthranilate phosphoribosyltransferase; PFAM: glycosyl transferase family 3; Glycosyl transferase, family 3-like YP_004091594.1 KEGG: ere:EUBREC_2977 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase YP_004091595.1 KEGG: tmt:Tmath_1419 phosphoribosylanthranilate isomerase; PFAM: N-(5'phosphoribosyl)anthranilate isomerase (PRAI) YP_004091596.1 KEGG: cth:Cthe_1412 tryptophan synthase subunit beta; TIGRFAM: tryptophan synthase, beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit YP_004091597.1 TIGRFAM: tryptophan synthase, alpha subunit; KEGG: clj:CLJU_c16130 tryptophan synthase subunit alpha; PFAM: tryptophan synthase alpha chain YP_004091598.1 KEGG: cce:Ccel_2990 peptidase S1 and S6 chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; PDZ/DHR/GLGF domain protein; SMART: PDZ/DHR/GLGF domain protein YP_004091599.1 KEGG: avi:Avi_0028 thioredoxin; TIGRFAM: thioredoxin; PFAM: Thioredoxin domain-containing protein YP_004091600.1 KEGG: cag:Cagg_2104 transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp; cyclic nucleotide-binding YP_004091601.1 KEGG: drm:Dred_0187 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; TIGRFAM: 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase; PFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol synthase YP_004091602.1 KEGG: glo:Glov_3480 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; TIGRFAM: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; PFAM: MECDP-synthase YP_004091603.1 PFAM: aminotransferase class V; KEGG: tjr:TherJR_3003 cysteine desulfurase family protein YP_004091604.1 PFAM: AMP-dependent synthetase and ligase; KEGG: tjr:TherJR_1681 AMP-dependent synthetase and ligase YP_004091605.1 PFAM: natural resistance-associated macrophage protein; KEGG: cbe:Cbei_3364 natural resistance-associated macrophage protein YP_004091606.1 KEGG: csc:Csac_1222 MgtE intracellular region; PFAM: MgtE intracellular region; PRC-barrel domain protein; CBS domain containing protein; SMART: CBS domain containing protein YP_004091607.1 KEGG: cth:Cthe_1917 ATPase, P-type (transporting), HAD superfamily, subfamily IC; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004091608.1 KEGG: bcr:BCAH187_A5240 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091609.1 PFAM: Protein of unknown function DUF2142, membrane; KEGG: cac:CA_C0024 hypothetical protein YP_004091610.1 KEGG: cce:Ccel_2293 HPr kinase; TIGRFAM: HPr(Ser) kinase/phosphatase; PFAM: HPr serine kinase domain-containing protein YP_004091611.1 KEGG: cth:Cthe_0111 putative hydrolase; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004091612.1 PFAM: ROK family protein; KEGG: cth:Cthe_2938 glucokinase YP_004091613.1 PFAM: UDP-N-acetylenolpyruvoylglucosamine reductase domain-containing protein; FAD linked oxidase domain protein; manually curated; KEGG: slp:Slip_1089 UDP-N-acetylenolpyruvoylglucosamine reductase; TIGRFAM: UDP-N-acetylenolpyruvoylglucosamine reductase YP_004091614.1 KEGG: cth:Cthe_0113 hypothetical protein YP_004091615.1 PFAM: protein of unknown function DUF199; KEGG: tmt:Tmath_1625 protein of unknown function DUF199 YP_004091616.1 SMART: phosphoesterase PHP domain protein; TIGRFAM: DNA polymerase III, alpha subunit; KEGG: cth:Cthe_1264 DNA polymerase III DnaE; PFAM: DNA polymerase III alpha subunit; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type YP_004091617.1 KEGG: cce:Ccel_1461 hypothetical protein YP_004091618.1 KEGG: cce:Ccel_2612 6-phosphofructokinase; TIGRFAM: 6-phosphofructokinase; PFAM: phosphofructokinase YP_004091619.1 PFAM: oxidoreductase FAD/NAD(P)-binding domain protein; Oxidoreductase FAD-binding domain protein; Dihydroorotate dehydrogenase, electron transfer subunit, iron-sulphur cluster binding domain; KEGG: cth:Cthe_0373 ferredoxin-NADP(+) reductase subunit alpha YP_004091620.1 KEGG: cth:Cthe_0372 sulfide dehydrogenase (flavoprotein) subunit SudA; TIGRFAM: glutamate synthase (NADPH), homotetrameric; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004091621.1 KEGG: cac:CA_C3552 lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004091622.1 PFAM: metallophosphoesterase; KEGG: btl:BALH_2741 serine/threonine protein phosphatase YP_004091623.1 PFAM: integrase family protein; KEGG: chy:CHY_1702 prophage LambdaCh01, site-specific recombinase phage integrase family protein protein YP_004091624.1 KEGG: bcy:Bcer98_2623 prophage LambdaBa02, DNA-binding protein, putative; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: Prophage CP4-57 regulatory YP_004091625.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004091626.1 TIGRFAM: prevent-host-death family protein; KEGG: tjr:TherJR_0894 prevent-host-death family protein YP_004091627.1 KEGG: slp:Slip_2180 addiction module toxin, RelE/StbE family; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system YP_004091628.1 KEGG: pto:PTO1100 diaminopimelate aminotransferase YP_004091629.1 KEGG: cth:Cthe_1535 hypothetical protein YP_004091630.1 KEGG: cth:Cthe_1536 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091631.1 KEGG: cth:Cthe_1537 hypothetical protein YP_004091632.1 KEGG: cth:Cthe_1538 XRE family transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004091633.1 PFAM: major facilitator superfamily MFS_1; KEGG: cac:CA_P0049 permease, MDR related YP_004091634.1 PFAM: protein of unknown function DUF477; KEGG: ctc:CTC00359 hypothetical protein YP_004091635.1 PFAM: LemA family protein; KEGG: trq:TRQ2_1831 LemA family protein YP_004091636.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rca:Rcas_2661 TrkA domain-containing protein YP_004091637.1 PFAM: TrkA-N domain protein; TrkA-C domain protein; KEGG: rrs:RoseRS_3063 TrkA domain-containing protein YP_004091638.1 KEGG: smu:SMU.1563 putative cation-transporting P-type ATPase PacL; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004091639.1 KEGG: cth:Cthe_1041 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; TIGRFAM: UDP-N-acetylmuramoylalanine/D-glutamate ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004091640.1 PFAM: GCN5-related N-acetyltransferase; KEGG: lmc:Lm4b_02236 hypothetical protein YP_004091641.1 PFAM: glycoside hydrolase family 25; KEGG: cdi:DIP2306 putative hydrolase YP_004091642.1 KEGG: amt:Amet_3459 hypothetical protein YP_004091643.1 KEGG: cth:Cthe_1795 3-deoxy-D-arabinoheptulosonate-7-phosphate synthase YP_004091644.1 PFAM: polysaccharide deacetylase; KEGG: cth:Cthe_0557 polysaccharide deacetylase YP_004091645.1 TIGRFAM: 5,10-methylenetetrahydrofolate reductase; KEGG: afn:Acfer_1852 methylenetetrahydrofolate reductase (NAD(P)H); PFAM: methylenetetrahydrofolate reductase YP_004091646.1 PFAM: Vitamin B12 dependent methionine synthase activation region; KEGG: amt:Amet_3374 vitamin B12 dependent methionine synthase, activation region YP_004091647.1 PFAM: homocysteine S-methyltransferase; dihydropteroate synthase DHPS; Methionine synthase B12-binding module cap domain protein; cobalamin B12-binding domain protein; KEGG: afn:Acfer_1850 homocysteine S-methyltransferase YP_004091648.1 SMART: Elongator protein 3/MiaB/NifB; TIGRFAM: biotin synthase; KEGG: cac:CA_C0210 biotine synthase (gene BioB); PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004091649.1 PFAM: BioY protein; KEGG: cac:CA_C0211 BioY protein precursor YP_004091650.1 KEGG: clj:CLJU_c26660 bifunctional biotin operon repressor/biotin-(acetyl-CoA carboxylase) ligase; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_004091651.1 TIGRFAM: phosphoglycerate mutase 1 family; KEGG: tde:TDE1697 phosphoglyceromutase; PFAM: Phosphoglycerate mutase YP_004091652.1 KEGG: efa:EF0298 copper-translocating P-type ATPase YP_004091653.1 PFAM: glutaredoxin; KEGG: clo:HMPREF0868_0924 glutaredoxin-like protein YP_004091654.1 PFAM: iron-containing alcohol dehydrogenase; Aldehyde Dehydrogenase; KEGG: afl:Aflv_2814 bifunctional acetaldehyde-CoA/alcohol dehydrogenase YP_004091655.1 PFAM: Rex DNA-binding domain protein; CoA-binding domain protein; KEGG: cth:Cthe_1798 redox-sensing transcriptional repressor REX YP_004091656.1 KEGG: cpy:Cphy_3096 isocitrate dehydrogenase (NAD(+)); PFAM: isocitrate/isopropylmalate dehydrogenase YP_004091657.1 KEGG: cth:Cthe_3158 aconitate hydratase; TIGRFAM: aconitate hydratase; PFAM: aconitate hydratase domain-containing protein YP_004091658.1 KEGG: mla:Mlab_1387 chaperone protein DnaJ; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: Protein of unknown function DUF2229, CoA enzyme activase; ATPase BadF/BadG/BcrA/BcrD type YP_004091659.1 PFAM: Protein of unknown function DUF2229, CoA enzyme activase; KEGG: mla:Mlab_1388 hypothetical protein YP_004091660.1 PFAM: peptidase S14 ClpP; KEGG: cth:Cthe_1097 ATP-dependent Clp protease proteolytic subunit ClpP YP_004091661.1 KEGG: bcl:ABC2211 hypothetical protein YP_004091662.1 KEGG: cth:Cthe_1095 cell divisionFtsK/SpoIIIE; PFAM: cell divisionFtsK/SpoIIIE; DNA translocase ftsK gamma; SMART: AAA ATPase YP_004091663.1 KEGG: ctc:CTC01364 hypothetical protein YP_004091664.1 KEGG: gyc:GYMC61_3579 hypothetical protein YP_004091665.1 PFAM: GCN5-related N-acetyltransferase; KEGG: aoe:Clos_1141 GCN5-related N-acetyltransferase YP_004091666.1 KEGG: dhd:Dhaf_2528 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004091667.1 PFAM: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen; KEGG: tpe:Tpen_1570 peroxidase YP_004091668.1 KEGG: sus:Acid_5432 YbaK/EbsC protein; TIGRFAM: ybaK/ebsC protein; PFAM: YbaK/prolyl-tRNA synthetase associated region YP_004091669.1 KEGG: cbe:Cbei_3072 hypothetical protein YP_004091670.1 PFAM: Peptidase M23; KEGG: ade:Adeh_1347 peptidase M23B YP_004091671.1 PFAM: peptidase M50; KEGG: drm:Dred_2539 peptidase M50 YP_004091672.1 KEGG: str:Sterm_3075 putative methyl-accepting chemotaxis sensory transducer YP_004091673.1 PFAM: GCN5-related N-acetyltransferase; KEGG: mba:Mbar_A2957 putative acetyltransferase YP_004091674.1 PFAM: protein of unknown function DUF214; KEGG: tmt:Tmath_1081 protein of unknown function DUF214 YP_004091675.1 TIGRFAM: efflux transporter, RND family, MFP subunit; KEGG: mta:Moth_2322 secretion protein HlyD YP_004091676.1 KEGG: chy:CHY_0539 hypothetical protein YP_004091677.1 KEGG: cce:Ccel_0336 DNA repair protein RadA; TIGRFAM: DNA repair protein RadA; SMART: AAA ATPase YP_004091678.1 KEGG: amt:Amet_4440 N-acetylmuramoyl-L-alanine amidase CwlD; PFAM: cell wall hydrolase/autolysin; SMART: cell wall hydrolase/autolysin YP_004091679.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; Peptidoglycan-binding domain 1 protein; KEGG: cce:Ccel_1784 ErfK/YbiS/YcfS/YnhG family protein YP_004091680.1 KEGG: eay:EAM_1186 methylated-DNA--protein-cysteine methyltransferase; TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; methylguanine DNA methyltransferase ribonuclease domain protein YP_004091681.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: tte:TTE1363 site-specific tyrosine recombinase XerC YP_004091682.1 PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: cth:Cthe_0676 tyrosine recombinase XerD subunit YP_004091683.1 PFAM: protein of unknown function DUF95 transmembrane; KEGG: bld:BLi02504 hypothetical protein YP_004091684.1 TIGRFAM: pyrroline-5-carboxylate reductase; KEGG: cth:Cthe_0672 pyrroline-5-carboxylate reductase; PFAM: NADP oxidoreductase coenzyme F420-dependent YP_004091686.1 PFAM: Radical SAM domain protein; KEGG: cth:Cthe_0906 radical SAM family protein YP_004091687.1 KEGG: ere:EUBREC_1010 hypothetical protein YP_004091688.1 KEGG: dae:Dtox_1362 hypothetical protein YP_004091689.1 KEGG: ate:Athe_0391 preprotein translocase, YajC subunit; TIGRFAM: preprotein translocase, YajC subunit; PFAM: YajC family protein YP_004091690.1 TIGRFAM: queuine tRNA-ribosyltransferase; tRNA-guanine transglycosylase, various specificities; KEGG: cpr:CPR_1912 queuine tRNA-ribosyltransferase; PFAM: Queuine/other tRNA-ribosyltransferase YP_004091691.1 KEGG: cth:Cthe_0959 S-adenosylmethionine:tRNA ribosyltransferase-isomerase; TIGRFAM: S-adenosylmethionine/tRNA-ribosyltransferase-isomerase; PFAM: Queuosine biosynthesis protein YP_004091692.1 TIGRFAM: aspartate-semialdehyde dehydrogenase; KEGG: eel:EUBELI_01248 aspartate-semialdehyde dehydrogenase; PFAM: Semialdehyde dehydrogenase dimerisation region; Semialdehyde dehydrogenase NAD - binding YP_004091693.1 KEGG: cbe:Cbei_4776 dihydrodipicolinate synthase; TIGRFAM: dihydrodipicolinate synthase; PFAM: dihydrodipicolinate synthetase YP_004091694.1 TIGRFAM: dihydrodipicolinate reductase; KEGG: cth:Cthe_0963 dihydrodipicolinate reductase; PFAM: dihydrodipicolinate reductase YP_004091695.1 PFAM: amino acid-binding ACT domain protein; KEGG: ate:Athe_1132 amino acid-binding ACT domain protein YP_004091696.1 PFAM: polysaccharide biosynthesis protein; KEGG: aoe:Clos_2639 polysaccharide biosynthesis protein YP_004091697.1 PFAM: Mannosyl-glycoprotein endo-beta-N-acetylglucosamidase; KEGG: cac:CA_C2325 N-acetylglucosaminidase domain- and ChW repeat-containing cell wall hydrolase; SMART: Lysozyme subfamily 2 YP_004091698.1 KEGG: cce:Ccel_3188 phosphopantothenoylcysteine decarboxylase; PFAM: flavoprotein YP_004091699.1 PFAM: DNA/pantothenate metabolism flavoprotein domain protein; KEGG: cce:Ccel_3187 phosphopantothenate--cysteine ligase YP_004091700.1 PFAM: periplasmic solute binding protein; KEGG: clj:CLJU_c37880 putative metal-binding protein YP_004091701.1 KEGG: cba:CLB_1594 phosphoribosyl-ATP pyrophosphatase; TIGRFAM: phosphoribosyl-ATP diphosphatase; PFAM: Phosphoribosyl-ATP pyrophosphohydrolase-like YP_004091702.1 KEGG: afn:Acfer_0923 phosphoribosyl-AMP cyclohydrolase; PFAM: phosphoribosyl-AMP cyclohydrolase YP_004091703.1 KEGG: cac:CA_C0941 imidazole glycerol phosphate synthase subunit HisF; TIGRFAM: imidazoleglycerol phosphate synthase, cyclase subunit; PFAM: histidine biosynthesis protein YP_004091704.1 TIGRFAM: phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase; KEGG: cno:NT01CX_1065 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; PFAM: histidine biosynthesis protein YP_004091705.1 KEGG: cac:CA_C0939 imidazole glycerol phosphate synthase subunit HisH; TIGRFAM: imidazole glycerol phosphate synthase, glutamine amidotransferase subunit; PFAM: glutamine amidotransferase class-I YP_004091706.1 KEGG: cbh:CLC_1599 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase YP_004091707.1 PFAM: aminotransferase class I and II; KEGG: cno:NT01CX_1063 histidinol-phosphate aminotransferase YP_004091708.1 TIGRFAM: histidinol dehydrogenase; KEGG: cbe:Cbei_1317 histidinol dehydrogenase; PFAM: Histidinol dehydrogenase YP_004091709.1 TIGRFAM: ATP phosphoribosyltransferase; KEGG: clj:CLJU_c11670 ATP phosphoribosyltransferase; PFAM: ATP phosphoribosyltransferase catalytic region YP_004091710.1 TIGRFAM: histidyl-tRNA synthetase 2; KEGG: ckr:CKR_1189 hypothetical protein; PFAM: tRNA synthetase class II (G H P and S) YP_004091711.1 KEGG: drm:Dred_0543 hypothetical protein YP_004091712.1 KEGG: osa:4338649 hypothetical protein YP_004091713.1 TIGRFAM: methionine-R-sulfoxide reductase; peptide methionine sulfoxide reductase; KEGG: dhd:Dhaf_4592 methionine-R-sulfoxide reductase; PFAM: Methionine sulfoxide reductase A; Methionine sulfoxide reductase B YP_004091714.1 KEGG: blj:BLD_0077 trans-aconitate methyltransferase; PFAM: Methyltransferase type 11 YP_004091715.1 KEGG: cpy:Cphy_1240 two component LuxR family transcriptional regulator; PFAM: response regulator receiver; regulatory protein LuxR; SMART: response regulator receiver; regulatory protein LuxR YP_004091716.1 PFAM: histidine kinase dimerisation and phosphoacceptor region; ATP-binding region ATPase domain protein; KEGG: cpy:Cphy_1239 integral membrane sensor signal transduction histidine kinase YP_004091717.1 KEGG: cpy:Cphy_1225 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091718.1 KEGG: cpy:Cphy_1224 ABC-2 type transporter YP_004091719.1 PFAM: ABC-2 type transporter; KEGG: ele:Elen_0561 hypothetical protein YP_004091720.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: dal:Dalk_4707 short-chain dehydrogenase/reductase SDR YP_004091721.1 PFAM: glycoside hydrolase family 1; KEGG: hor:Hore_04820 beta-glucosidase YP_004091722.1 KEGG: cbe:Cbei_4017 methyl-accepting chemotaxis sensory transducer; PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; histidine kinase HAMP region domain protein YP_004091723.1 TIGRFAM: A/G-specific adenine glycosylase; PFAM: HhH-GPD family protein; KEGG: cpy:Cphy_3362 A/G-specific adenine glycosylase; SMART: HhH-GPD family protein YP_004091724.1 KEGG: cth:Cthe_2039 DNA helicase/exodeoxyribonuclease V, subunit A; TIGRFAM: recombination helicase AddA; PFAM: UvrD/REP helicase YP_004091725.1 KEGG: tpd:Teth39_2011 ATP-dependent nuclease subunit B-like protein YP_004091726.1 KEGG: cth:Cthe_0714 4-hydroxy-3-methylbut-2-enyl diphosphate reductase/S1 RNA-binding domain protein; TIGRFAM: hydroxymethylbutenyl pyrophosphate reductase; PFAM: LytB protein; RNA binding S1 domain protein YP_004091727.1 TIGRFAM: 1-acyl-sn-glycerol-3-phosphate acyltransferase; PFAM: phospholipid/glycerol acyltransferase; KEGG: gwc:GWCH70_2170 1-acyl-sn-glycerol-3-phosphate acyltransferase; SMART: phospholipid/glycerol acyltransferase YP_004091728.1 KEGG: ate:Athe_1325 cytidylate kinase; TIGRFAM: cytidylate kinase; PFAM: cytidylate kinase region YP_004091729.1 PFAM: HI0933 family protein; KEGG: cth:Cthe_0708 FAD dependent oxidoreductase YP_004091730.1 PFAM: sugar isomerase (SIS); helix-turn-helix protein RpiR; KEGG: cth:Cthe_0706 RpiR family transcriptional regulator YP_004091731.1 KEGG: bfs:BF1783 hypothetical protein YP_004091732.1 KEGG: ctc:CTC01815 phosphodiesterase; TIGRFAM: phosphodiesterase, MJ0936 family; PFAM: metallophosphoesterase YP_004091733.1 PFAM: glycosyl transferase family 39; KEGG: cbe:Cbei_4029 glycosyl transferase family protein YP_004091734.1 KEGG: bfa:Bfae_09920 nucleoside diphosphate kinase; PFAM: nucleoside diphosphate kinase; SMART: nucleoside diphosphate kinase YP_004091735.1 PFAM: aminodeoxychorismate lyase; KEGG: cth:Cthe_1008 aminodeoxychorismate lyase YP_004091737.1 KEGG: apv:Apar_0658 5-formyltetrahydrofolate cyclo-ligase; TIGRFAM: 5-formyltetrahydrofolate cyclo-ligase; PFAM: 5-formyltetrahydrofolate cyclo-ligase YP_004091738.1 KEGG: bvu:BVU_0473 ThiJ family intracellular protease; TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain-containing protein YP_004091739.1 PFAM: GCN5-related N-acetyltransferase; KEGG: bfs:BF0415 acetyltransferase YP_004091740.1 KEGG: bth:BT_3689 hypothetical protein YP_004091741.1 SMART: guanylate kinase/L-type calcium channel region; KEGG: cac:CA_C0298 guanylate kinase YP_004091742.1 KEGG: slp:Slip_2257 thymidylate synthase, flavin-dependent; TIGRFAM: thymidylate synthase, flavin-dependent; PFAM: thymidylate synthase complementing protein ThyX YP_004091743.1 TIGRFAM: glycosyl transferase, WecB/TagA/CpsF family; KEGG: csc:Csac_1349 WecB/TagA/CpsF family glycosyl transferase; PFAM: glycosyl transferase WecB/TagA/CpsF YP_004091744.1 KEGG: tro:trd_0490 hypothetical protein YP_004091745.1 KEGG: ere:EUBREC_2602 S-ribosylhomocysteinase; PFAM: LuxS protein YP_004091746.1 KEGG: llm:llmg_0778 DNA mismatch repair protein MutS; PFAM: Smr protein/MutS2; SMART: Smr protein/MutS2 YP_004091748.1 KEGG: pmo:Pmob_1517 hypothetical protein YP_004091749.1 KEGG: sat:SYN_02496 cytidylate kinase YP_004091750.1 KEGG: bvu:BVU_3248 haloacid dehalogenase-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004091751.1 KEGG: hch:HCH_06548 hypothetical protein YP_004091752.1 KEGG: gym:GYMC10_4830 phosphoenolpyruvate-protein phosphotransferase; TIGRFAM: phosphoenolpyruvate-protein phosphotransferase; PFAM: PEP-utilizing protein; PEP-utilising protein domain protein; PEP-utilising protein mobile region YP_004091753.1 KEGG: srm:SRM_02081 HPr-like protein crh; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004091754.1 TIGRFAM: 1-phosphofructokinase; KEGG: tte:TTE2587 fructose-1-phosphate kinase-like protein; PFAM: PfkB domain protein YP_004091755.1 KEGG: csc:Csac_2442 DeoR family transcriptional regulator; PFAM: regulatory protein DeoR; SMART: regulatory protein DeoR YP_004091756.1 KEGG: cth:Cthe_0324 valyl-tRNA synthetase; TIGRFAM: valyl-tRNA synthetase YP_004091757.1 KEGG: tit:Thit_0220 hemerythrin-like metal-binding protein; TIGRFAM: hemerythrin-like metal-binding protein; PFAM: Hemerythrin HHE cation binding domain protein YP_004091758.1 TIGRFAM: FolC bifunctional protein; KEGG: cth:Cthe_1384 FolC bifunctional protein; PFAM: cytoplasmic peptidoglycan synthetase domain protein; Mur ligase middle domain protein YP_004091759.1 KEGG: afl:Aflv_1002 stage II sporulation protein AA (antagonist of anti-sigma factor, stand-alone STAS domain); TIGRFAM: anti-anti-sigma factor; PFAM: Sulfate transporter/antisigma-factor antagonist STAS YP_004091760.1 SMART: ATP-binding region ATPase domain protein; TIGRFAM: anti-sigma F factor; KEGG: cth:Cthe_0119 anti-sigma F factor; PFAM: ATP-binding region ATPase domain protein YP_004091761.1 KEGG: bts:Btus_1834 RNA polymerase, sigma 28 subunit, FliA/WhiG subfamily; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004091762.1 KEGG: cpy:Cphy_1245 nuclease SbcCD, D subunit; TIGRFAM: nuclease SbcCD, D subunit; PFAM: metallophosphoesterase YP_004091763.1 PFAM: SMC domain protein; KEGG: cpy:Cphy_1246 SMC domain-containing protein YP_004091764.1 PFAM: thiazole biosynthesis family protein; KEGG: drm:Dred_0073 thiazole biosynthesis family protein YP_004091765.1 KEGG: mta:Moth_1664 thiamine biosynthesis protein ThiH; TIGRFAM: thiazole biosynthesis protein ThiH; PFAM: biotin and thiamin synthesis associated; Radical SAM domain protein YP_004091766.1 KEGG: dba:Dbac_0773 thiamine-phosphate pyrophosphorylase; TIGRFAM: thiamine-phosphate pyrophosphorylase; PFAM: thiamine monophosphate synthase YP_004091767.1 KEGG: sfu:Sfum_1823 thiamine biosynthesis protein ThiS; TIGRFAM: thiamine biosynthesis protein ThiS; PFAM: thiamineS protein YP_004091768.1 KEGG: efa:EF2312 DNA topoisomerase III YP_004091769.1 PFAM: helix-turn-helix HxlR type; KEGG: cdl:CDR20291_1274 putative transcriptional regulator YP_004091770.1 PFAM: isochorismatase hydrolase; KEGG: bcg:BCG9842_B0018 isochorismatase family protein YP_004091771.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cko:CKO_01450 hypothetical protein; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004091772.1 PFAM: flavodoxin/nitric oxide synthase; KEGG: ppd:Ppro_1943 hypothetical protein YP_004091773.1 KEGG: cbe:Cbei_0678 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004091774.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: bge:BC1002_2474 protein of unknown function DUF6 transmembrane YP_004091775.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: dae:Dtox_3060 transcriptional regulator, LysR family YP_004091776.1 KEGG: rcu:RCOM_2130630 HTH-type transcriptional regulator hmrR, putative; PFAM: transcription regulator MerR DNA binding; regulatory protein MerR; SMART: regulatory protein MerR YP_004091777.1 PFAM: Carboxymuconolactone decarboxylase; KEGG: hhe:HH1468 hypothetical protein YP_004091778.1 KEGG: lrh:LGG_01349 MerR family transcriptional regulator; PFAM: regulatory protein MerR; transcription regulator MerR DNA binding; SMART: regulatory protein MerR YP_004091779.1 PFAM: protein of unknown function DUF81; KEGG: lcz:LCAZH_1873 putative permease YP_004091780.1 PFAM: regulatory protein TetR; KEGG: sti:Sthe_0841 putative transcriptional regulator, TetR family YP_004091782.1 manually curated; KEGG: cce:Ccel_3107 hypothetical protein YP_004091783.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: tte:TTE1651 cell division protein FtsI/penicillin-binding protein 2; SMART: PASTA domain containing protein YP_004091784.1 PFAM: protein of unknown function DUF74; KEGG: bte:BTH_I2656 domain of unknown function, putative YP_004091785.1 KEGG: ehi:EHI_056440 WD domain containing protein YP_004091786.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbl:CLK_0427 acetyltransferase YP_004091787.1 KEGG: cth:Cthe_1751 RNA methyltransferase; TIGRFAM: RNA methyltransferase, TrmA family; PFAM: (Uracil-5)-methyltransferase; deoxyribonuclease/rho motif-related TRAM YP_004091788.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; KEGG: tpd:Teth39_1422 serine-type D-Ala-D-Ala carboxypeptidase YP_004091789.1 KEGG: yen:YE1768 23S rRNA methyltransferase A; PFAM: Methyltransferase type 11 YP_004091790.1 TIGRFAM: excinuclease ABC, A subunit; PFAM: ABC transporter related; KEGG: cth:Cthe_0311 excinuclease ABC subunit A; SMART: AAA ATPase YP_004091791.1 KEGG: cce:Ccel_1396 hypothetical protein YP_004091792.1 TIGRFAM: excinuclease ABC, B subunit; PFAM: helicase domain protein; type III restriction protein res subunit; UvrB/UvrC protein; KEGG: tjr:TherJR_2733 excinuclease ABC, B subunit; SMART: DEAD-like helicase ; helicase domain protein YP_004091793.1 KEGG: ate:Athe_0559 DNA repair protein RadC; TIGRFAM: DNA repair protein RadC; PFAM: DNA repair protein RadC YP_004091794.1 KEGG: cth:Cthe_1962 RluA family pseudouridine synthase; TIGRFAM: pseudouridine synthase, RluA family; PFAM: pseudouridine synthase; RNA-binding S4 domain protein YP_004091795.1 PFAM: polysaccharide biosynthesis protein; KEGG: cbi:CLJ_B1537 polysaccharide biosynthesis family protein YP_004091796.1 PFAM: SNARE associated Golgi protein; KEGG: clj:CLJU_c15950 hypothetical protein YP_004091797.1 KEGG: dtu:Dtur_0341 protein of unknown function Met10; PFAM: methyltransferase small; SMART: PUA domain containing protein YP_004091798.1 KEGG: clj:CLJU_c35730 aspartate carbamoyltransferase catalytic subunit; TIGRFAM: aspartate carbamoyltransferase; PFAM: aspartate/ornithine carbamoyltransferase carbamoyl-P binding domain; aspartate/ornithine carbamoyltransferase Asp/Orn-binding region YP_004091799.1 PFAM: glycosyl transferase group 1; KEGG: npu:Npun_F4534 methyltransferase type 11 YP_004091800.1 PFAM: glycosyl transferase family 2; KEGG: mma:MM_2213 putative glycosyltransferase YP_004091801.1 PFAM: glycosyl transferase family 2; KEGG: cac:CA_C2327 glycosyltransferase domain-containing protein YP_004091802.1 KEGG: ate:Athe_0053 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091803.1 PFAM: ABC-2 type transporter; KEGG: ate:Athe_0052 ABC-2 type transporter YP_004091804.1 KEGG: eel:EUBELI_00086 dTDP-glucose 4,6-dehydratase; TIGRFAM: dTDP-glucose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004091805.1 TIGRFAM: dTDP-4-dehydrorhamnose 3,5-epimerase; KEGG: dae:Dtox_4129 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose 35-epimerase related YP_004091806.1 TIGRFAM: dTDP-4-dehydrorhamnose reductase; KEGG: ate:Athe_0060 dTDP-4-dehydrorhamnose reductase; PFAM: dTDP-4-dehydrorhamnose reductase YP_004091807.1 KEGG: lcb:LCABL_02370 putative glycosyl transferase YP_004091808.1 KEGG: tit:Thit_0653 glucose-1-phosphate thymidylyltransferase; TIGRFAM: glucose-1-phosphate thymidylyltransferase; PFAM: Nucleotidyl transferase YP_004091809.1 PFAM: glycosyl transferase family 2; KEGG: ere:EUBREC_1030 glycosyltransferase YP_004091810.1 PFAM: glycosyl transferase family 2; KEGG: bay:RBAM_031600 EpsH YP_004091811.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cac:CA_C2502 permease YP_004091812.1 KEGG: cac:CA_C2501 membrane protein, transporter of cations and cationic drugs YP_004091813.1 PFAM: tRNA/rRNA methyltransferase (SpoU); KEGG: cth:Cthe_0127 RNA methyltransferase YP_004091814.1 KEGG: cth:Cthe_0138 phosphoglycerate kinase; PFAM: phosphoglycerate kinase YP_004091815.1 TIGRFAM: triosephosphate isomerase; KEGG: cce:Ccel_2260 bifunctional phosphoglycerate kinase/triosephosphate isomerase; PFAM: triosephosphate isomerase YP_004091816.1 TIGRFAM: phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent; KEGG: cth:Cthe_0140 phosphoglyceromutase; PFAM: BPG-independent PGAM domain protein; metalloenzyme domain protein YP_004091817.1 KEGG: cth:Cthe_2098 nucleoside recognition YP_004091818.1 PFAM: nucleoside recognition domain protein; KEGG: cce:Ccel_0165 nucleoside recognition domain protein YP_004091819.1 KEGG: bts:Btus_0050 transcriptional regulator, AbrB family; TIGRFAM: transcriptional regulator, AbrB family; PFAM: SpoVT/AbrB domain-containing protein YP_004091820.1 PFAM: CMP/dCMP deaminase zinc-binding; KEGG: bpf:BpOF4_08050 Cu binding protein (Mn oxidation) YP_004091821.1 PFAM: Abortive infection protein; KEGG: cbe:Cbei_4810 abortive infection protein YP_004091822.1 KEGG: cbf:CLI_2559 50S ribosomal protein L28; TIGRFAM: ribosomal protein L28; PFAM: ribosomal protein L28 YP_004091823.1 KEGG: cac:CA_C3660 hypothetical protein YP_004091824.1 PFAM: Nitrogenase iron-iron accessory protein AnfO; KEGG: ckr:CKR_1628 hypothetical protein YP_004091825.1 PFAM: pyruvate carboxyltransferase; KEGG: cbe:Cbei_2012 homocitrate synthase YP_004091826.1 KEGG: clj:CLJU_c04970 homocitrate synthase subunit omega YP_004091827.1 KEGG: cbe:Cbei_2006 ferredoxin, 2Fe-2S YP_004091828.1 TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: oxidoreductase/nitrogenase component 1; Radical SAM domain protein; Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cbe:Cbei_2005 nitrogenase cofactor biosynthesis protein NifB; SMART: Elongator protein 3/MiaB/NifB YP_004091829.1 KEGG: cbe:Cbei_2004 nitrogenase MoFe cofactor biosynthesis protein NifE; TIGRFAM: nitrogenase MoFe cofactor biosynthesis protein NifE; PFAM: oxidoreductase/nitrogenase component 1 YP_004091830.1 TIGRFAM: nitrogenase molybdenum-iron protein beta chain; KEGG: cbe:Cbei_2003 nitrogenase molybdenum-iron protein beta chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004091831.1 KEGG: ckr:CKR_2723 hypothetical protein; TIGRFAM: nitrogenase molybdenum-iron protein alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004091832.1 PFAM: nitrogen regulatory protein P-II; KEGG: cbe:Cbei_2001 nitrogen regulatory protein P-II YP_004091833.1 PFAM: nitrogen regulatory protein P-II; KEGG: ckr:CKR_2725 hypothetical protein YP_004091834.1 TIGRFAM: nitrogenase iron protein; KEGG: cbe:Cbei_0623 nitrogenase iron protein; PFAM: NifH/frxC-family protein YP_004091835.1 KEGG: ckr:CKR_1585 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091836.1 PFAM: TOBE domain-containing protein; KEGG: azc:AZC_1054 molybdopterin-binding protein YP_004091837.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: ckr:CKR_2727 hypothetical protein YP_004091838.1 KEGG: cyc:PCC7424_4992 molybdenum ABC transporter, periplasmic molybdate-binding protein; TIGRFAM: molybdenum ABC transporter, periplasmic molybdate-binding protein; PFAM: extracellular solute-binding protein family 1 YP_004091839.1 KEGG: hmo:HM1_1550 molybdate abc transporter, permease protein; TIGRFAM: molybdate ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004091840.1 KEGG: syn:sll0739 ABC transporter; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091841.1 KEGG: swo:Swol_1921 cell envelope-related transcriptional attenuator YP_004091842.1 KEGG: mtp:Mthe_1020 hypothetical protein YP_004091843.1 KEGG: ctc:CTC00445 putative metal dependent hydrolase YP_004091844.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: bfs:BF1382 putative lactoylglutathione lyase YP_004091845.1 KEGG: cce:Ccel_2273 trans-2-enoyl-CoA reductase; PFAM: short-chain alcohol dehydrogenase YP_004091846.1 PFAM: nitroreductase; KEGG: mru:mru_0692 nitroreductase family protein YP_004091847.1 manually curated; TIGRFAM: transcriptional regulator, Rrf2 family; KEGG: cno:NT01CX_0668 rrf2 family protein (putative transcriptional regulator); PFAM: protein of unknown function UPF0074 YP_004091848.1 KEGG: sin:YN1551_2158 transposase, IS605 OrfB family YP_004091849.1 KEGG: spj:MGAS2096_Spy1121 antigen-like protein YP_004091850.1 KEGG: dae:Dtox_4223 hypothetical protein YP_004091851.1 KEGG: dae:Dtox_4224 hypothetical protein YP_004091852.1 KEGG: dae:Dtox_4225 hypothetical protein YP_004091853.1 TIGRFAM: phage uncharacterized protein; KEGG: cbf:CLI_2421 hypothetical protein YP_004091854.1 KEGG: cce:Ccel_3296 putative phage minor capsid protein YP_004091855.1 KEGG: ctt:CtCNB1_4084 hypothetical protein YP_004091856.1 KEGG: seu:SEQ_0171 phage major capsid protein YP_004091857.1 KEGG: cce:Ccel_3042 hypothetical protein YP_004091858.1 KEGG: cpf:CPF_0959 hypothetical protein YP_004091859.1 KEGG: cpf:CPF_0960 hypothetical protein YP_004091860.1 KEGG: cce:Ccel_3039 hypothetical protein YP_004091861.1 KEGG: cce:Ccel_3038 hypothetical protein YP_004091862.1 KEGG: cce:Ccel_3284 hypothetical protein YP_004091863.1 KEGG: cbt:CLH_2108 tail tape measure protein YP_004091864.1 KEGG: ami:Amir_5636 hypothetical protein YP_004091865.1 KEGG: olu:OSTLU_41836 predicted protein YP_004091866.1 KEGG: ckr:CKR_2328 hypothetical protein YP_004091867.1 PFAM: glycoside hydrolase family 25; KEGG: cno:NT01CX_2099 glycosy hydrolase family protein YP_004091868.1 KEGG: efa:EF1485 hypothetical protein YP_004091869.1 KEGG: psp:PSPPH_2358 papain cysteine protease family protein YP_004091870.1 PFAM: UreE urease accessory domain-containing protein; KEGG: cth:Cthe_1815 urease accessory protein UreE YP_004091871.1 PFAM: protein of unknown function DUF147; KEGG: cce:Ccel_1201 protein of unknown function DUF147 YP_004091872.1 PFAM: YbbR family protein; KEGG: csc:Csac_1184 YbbR family protein YP_004091873.1 PFAM: FAD dependent oxidoreductase; KEGG: cth:Cthe_1164 FAD dependent oxidoreductase YP_004091874.1 TIGRFAM: UDP-N-acetylglucosamine 2-epimerase; KEGG: trq:TRQ2_1774 UDP-N-acetylglucosamine 2-epimerase; PFAM: UDP-N-acetylglucosamine 2-epimerase YP_004091875.1 KEGG: efa:EF0300 hypothetical protein YP_004091876.1 PFAM: protein of unknown function DUF1648; KEGG: mba:Mbar_A3397 hypothetical protein YP_004091877.1 KEGG: amt:Amet_2650 putative agmatinase; TIGRFAM: agmatinase; PFAM: Arginase/agmatinase/formiminoglutamase YP_004091878.1 KEGG: mcl:MCCL_1663 spermidine synthase; TIGRFAM: spermidine synthase; PFAM: Spermine synthase YP_004091879.1 TIGRFAM: S-adenosylmethionine decarboxylase proenzyme; KEGG: cac:CA_C2601 S-adenosylmethionine decarboxylase; PFAM: S-adenosylmethionine decarboxylase related YP_004091880.1 PFAM: nitroreductase; KEGG: bcq:BCQ_1942 nitroreductase family protein YP_004091881.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: dhd:Dhaf_0017 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004091882.1 TIGRFAM: DNA polymerase III, alpha subunit; DNA polymerase III, epsilon subunit; PFAM: DNA polymerase III alpha subunit; Exonuclease RNase T and DNA polymerase III; PHP domain protein; nucleic acid binding OB-fold tRNA/helicase-type; KEGG: cth:Cthe_0996 DNA polymerase III PolC; SMART: Exonuclease; phosphoesterase PHP domain protein YP_004091883.1 KEGG: pth:PTH_1262 hypothetical protein; TIGRFAM: 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase; PFAM: IspG family protein YP_004091884.1 KEGG: tmt:Tmath_1246 membrane-associated zinc metalloprotease; TIGRFAM: membrane-associated zinc metalloprotease; PFAM: peptidase M50 YP_004091885.1 TIGRFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; KEGG: nde:NIDE1511 1-deoxy-D-xylulose-5-phosphate reductoisomerase; PFAM: 1-deoxy-D-xylulose 5-phosphate reductoisomerase domain-containing protein YP_004091886.1 PFAM: phosphatidate cytidylyltransferase; KEGG: tpd:Teth39_1219 phosphatidate cytidylyltransferase YP_004091887.1 TIGRFAM: undecaprenyl diphosphate synthase; KEGG: pla:Plav_3192 undecaprenyl diphosphate synthase; PFAM: Di-trans-poly-cis-decaprenylcistransferase YP_004091888.1 KEGG: cth:Cthe_1003 ribosome recycling factor; TIGRFAM: ribosome recycling factor; PFAM: ribosome recycling factor YP_004091889.1 KEGG: cth:Cthe_1004 uridylate kinase; TIGRFAM: uridylate kinase; PFAM: aspartate/glutamate/uridylate kinase YP_004091890.1 KEGG: pca:Pcar_1920 translation elongation factor Ts; TIGRFAM: translation elongation factor Ts; PFAM: translation elongation factor EFTs/EF1B dimerisation; ubiquitin-associated- domain-containing protein YP_004091891.1 KEGG: pth:PTH_1252 30S ribosomal protein S2; TIGRFAM: ribosomal protein S2; PFAM: ribosomal protein S2 YP_004091892.1 KEGG: bcq:BCQ_3688 photosynthetic reaction centre, H-chain, cytoplasmic; TIGRFAM: sporulation protein, YlmC/YmxH family; PFAM: PRC-barrel domain protein YP_004091893.1 KEGG: tpd:Teth39_0822 sporulation sigma factor SigG; TIGRFAM: RNA polymerase sigma-70 factor, sigma-B/F/G subfamily; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 2 domain protein; sigma-70 region 3 domain protein; sigma-70 region 4 domain protein YP_004091894.1 KEGG: amt:Amet_2871 sporulation sigma factor SigE; TIGRFAM: RNA polymerase sigma-E factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_004091895.1 KEGG: amt:Amet_2872 peptidase U4, sporulation factor SpoIIGA; TIGRFAM: sigma-E processing peptidase SpoIIGA; PFAM: peptidase U4 sporulation factor SpoIIGA YP_004091896.1 manually curated; TIGRFAM: sugar (Glycoside-Pentoside-Hexuronide) transporter; KEGG: cbl:CLK_0637 sugar transporter family protein; PFAM: major facilitator superfamily MFS_1 YP_004091897.1 TIGRFAM: chaperone protein DnaJ; PFAM: chaperone DnaJ domain protein; heat shock protein DnaJ domain protein; DnaJ central domain protein; KEGG: cce:Ccel_1797 chaperone protein DnaJ; SMART: heat shock protein DnaJ domain protein YP_004091898.1 KEGG: cce:Ccel_1798 molecular chaperone DnaK; TIGRFAM: chaperone protein DnaK; PFAM: Heat shock protein 70 YP_004091899.1 PFAM: GrpE protein; KEGG: cac:CA_C1281 heat shock protein GrpE YP_004091900.1 KEGG: csc:Csac_1750 heat-inducible transcription repressor HrcA; TIGRFAM: heat-inducible transcription repressor HrcA; PFAM: Winged helix-turn-helix transcription repressor, HrcA-like YP_004091901.1 TIGRFAM: oxygen-independent coproporphyrinogen III oxidase; PFAM: Radical SAM domain protein; HemN domain protein; KEGG: ppd:Ppro_1304 putative oxygen-independent coproporphyrinogen III oxidase; SMART: Elongator protein 3/MiaB/NifB YP_004091902.1 KEGG: cth:Cthe_1326 GTP-binding protein LepA; TIGRFAM: GTP-binding protein LepA; small GTP-binding protein; PFAM: GTP-binding protein LepA domain protein; protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein; elongation factor G domain-containing protein YP_004091903.1 TIGRFAM: dimethyladenosine transferase; PFAM: ribosomal RNA adenine methylase transferase; KEGG: gtn:GTNG_0035 dimethyladenosine transferase; SMART: Ribosomal RNA adenine methylase transferase-like YP_004091904.1 KEGG: hne:HNE_1295 cytidine deaminase; TIGRFAM: cytidine deaminase; PFAM: CMP/dCMP deaminase zinc-binding YP_004091905.1 KEGG: tte:TTE1388 30S ribosomal protein S15; TIGRFAM: ribosomal protein S15; PFAM: ribosomal protein S15 YP_004091906.1 KEGG: phe:Phep_1483 tetratricopeptide TPR_2 repeat protein YP_004091907.1 KEGG: cpy:Cphy_0567 hypothetical protein; TIGRFAM: sortase, SrtB family; PFAM: peptidase C60 sortase A and B YP_004091908.1 KEGG: cce:Ccel_0674 competence/damage-inducible protein CinA; TIGRFAM: competence/damage-inducible protein CinA; PFAM: CinA domain protein; molybdopterin binding domain YP_004091909.1 KEGG: cce:Ccel_1683 thiamine biosynthesis/tRNA modification protein ThiI; TIGRFAM: thiamine biosynthesis/tRNA modification protein ThiI; PFAM: Thiamine biosynthesis protein-like; THUMP domain-containing protein YP_004091910.1 KEGG: ere:EUBREC_1901 cysteine sulfinate desulfinase/cysteine desulfurase and related enzyme; PFAM: aminotransferase class V YP_004091911.1 PFAM: CTP synthase-like; glutamine amidotransferase class-I; manually curated; KEGG: cth:Cthe_1923 CTP synthetase; TIGRFAM: CTP synthase YP_004091912.1 PFAM: Extradiol ring-cleavage dioxygenase class III protein subunit B; KEGG: fba:FIC_00436 hypothetical protein YP_004091913.1 manually curated; TIGRFAM: ribosomal protein L27; KEGG: eel:EUBELI_01015 large subunit ribosomal protein L27; PFAM: ribosomal protein L27 YP_004091914.1 KEGG: cth:Cthe_0160 50S ribosomal protein L21; TIGRFAM: ribosomal protein L21; PFAM: ribosomal protein L21 YP_004091915.1 KEGG: mta:Moth_1516 methenyltetrahydrofolate cyclohydrolase; PFAM: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain YP_004091916.1 KEGG: csc:Csac_0915 prolipoprotein diacylglyceryl transferase; TIGRFAM: prolipoprotein diacylglyceryl transferase; PFAM: prolipoprotein diacylglyceryl transferase YP_004091917.1 PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0985 peptidase M16-like protein YP_004091918.1 PFAM: peptidase M16 domain protein; KEGG: cth:Cthe_0986 peptidase M16-like protein YP_004091919.1 KEGG: cth:Cthe_0163 GTP1/OBG subdomain-containing protein; TIGRFAM: GTP-binding protein Obg/CgtA; small GTP-binding protein; Obg family GTPase CgtA; PFAM: GTP1/OBG sub domain protein; GTP-binding protein HSR1-related; GTP1/OBG domain protein YP_004091920.1 KEGG: cth:Cthe_2061 hypothetical protein; PFAM: ribonuclease III; SMART: ribonuclease III YP_004091921.1 PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; KEGG: mta:Moth_0235 hypothetical protein YP_004091922.1 TIGRFAM: pyruvate formate-lyase activating enzyme; KEGG: sth:STH114 pyruvate formate lyase activating enzyme; PFAM: Radical SAM domain protein YP_004091923.1 TIGRFAM: formate acetyltransferase; KEGG: afl:Aflv_2793 pyruvate-formate lyase; PFAM: pyruvate formate-lyase PFL; formate C-acetyltransferase glycine radical YP_004091924.1 PFAM: glycosyl transferase group 1; KEGG: dhd:Dhaf_3604 glycosyl transferase group 1 YP_004091925.1 KEGG: cpf:CPF_2590 hypothetical protein YP_004091926.1 KEGG: sth:STH1943 hypothetical protein YP_004091927.1 KEGG: spn:SP_0117 pneumococcal surface protein A YP_004091928.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: str:Sterm_3408 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004091929.1 PFAM: NLP/P60 protein; KEGG: cpe:CPE0278 hypothetical protein YP_004091930.1 PFAM: Resolvase domain; Recombinase; KEGG: hmo:HM1_2980 DNA recombinase, putative YP_004091931.1 KEGG: aoe:Clos_0002 DNA polymerase III subunit beta YP_004091932.1 KEGG: ngr:NAEGRDRAFT_61291 kinesin YP_004091933.1 KEGG: cac:CA_C2696 hypothetical protein YP_004091934.1 KEGG: cce:Ccel_3208 hypothetical protein YP_004091935.1 KEGG: dsy:DSY3417 hypothetical protein YP_004091936.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004091937.1 KEGG: dsy:DSY3291 hypothetical protein YP_004091939.1 PFAM: Restriction endonuclease BglII; KEGG: nmu:Nmul_A2609 hypothetical protein YP_004091940.1 PFAM: MT-A70 family protein; KEGG: azl:AZL_023720 type II DNA modification methyltransferase YP_004091941.1 KEGG: xla:380564 mannose-6-phosphate receptor (cation dependent) YP_004091943.1 KEGG: asu:Asuc_0950 hypothetical protein YP_004091944.1 KEGG: dhd:Dhaf_2871 hypothetical protein YP_004091945.1 KEGG: ssa:SSA_2186 bifunctional glutamate--cysteine ligase/glutathione synthetase YP_004091946.1 KEGG: dhd:Dhaf_2870 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004091947.1 KEGG: svo:SVI_0222 amino acid permease family protein YP_004091948.1 PFAM: regulatory protein TetR; KEGG: msi:Msm_0650 TetR/AcrR family transcriptional regulator YP_004091949.1 PFAM: alpha/beta hydrolase fold; KEGG: mma:MM_2553 putative hydrolase YP_004091950.1 PFAM: Coat F domain protein; KEGG: dae:Dtox_0525 hypothetical protein YP_004091951.1 PFAM: protein of unknown function DUF421; KEGG: tjr:TherJR_0421 protein of unknown function DUF421 YP_004091952.1 PFAM: protein of unknown function DUF421; KEGG: bha:BH2297 hypothetical protein YP_004091954.1 KEGG: cth:Cthe_0171 hypothetical protein YP_004091955.1 PFAM: Methyltransferase type 12; KEGG: tte:TTE2718 SAM-dependent methyltransferase YP_004091956.1 KEGG: lrh:LGG_02087 N-acetylmuramoyl-L-alanine amidase; TIGRFAM: LPXTG-motif cell wall anchor domain protein; PFAM: metallophosphoesterase YP_004091957.1 PFAM: major facilitator superfamily MFS_1; KEGG: tjr:TherJR_0453 major facilitator superfamily MFS_1 YP_004091958.1 KEGG: ckr:CKR_3211 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004091959.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004091960.1 KEGG: eel:EUBELI_01804 hypothetical protein YP_004091961.1 KEGG: ere:EUBREC_0622 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004091962.1 KEGG: vpr:Vpar_0181 GMP synthase, large subunit; TIGRFAM: GMP synthase, large subunit; GMP synthase, small subunit; PFAM: GMP synthase domain protein; glutamine amidotransferase class-I YP_004091963.1 PFAM: cell cycle protein; KEGG: cbf:CLI_0695 rod shape-determining protein RodA YP_004091964.1 KEGG: cth:Cthe_2399 formate-tetrahydrofolate ligase; PFAM: formate-tetrahydrofolate ligase FTHFS YP_004091965.1 PFAM: Uncharacterised protein family UPF0079, ATPase; KEGG: rmr:Rmar_2519 protein of unknown function UPF0079 YP_004091966.1 PFAM: peptidase M22 glycoprotease; KEGG: cth:Cthe_1775 peptidase M22, glycoprotease YP_004091967.1 TIGRFAM: sugar-phosphate isomerase, RpiB/LacA/LacB family; ribose 5-phosphate isomerase B; KEGG: cpy:Cphy_3745 RpiB/LacA/LacB family sugar-phosphate isomerase; PFAM: Ribose/galactose isomerase YP_004091968.1 TIGRFAM: uracil phosphoribosyltransferase; KEGG: afl:Aflv_2712 uracil phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004091969.1 PFAM: Silent information regulator protein Sir2; KEGG: lsl:LSL_0203 NAD-dependent deacetylase YP_004091970.1 PFAM: glutamine amidotransferase class-I; KEGG: dae:Dtox_1039 glutamine amidotransferase class-I YP_004091971.1 KEGG: cno:NT01CX_1247 hypothetical protein YP_004091972.1 KEGG: sth:STH609 putative lipase YP_004091973.1 PFAM: peptidase M14 carboxypeptidase A; KEGG: cpr:CPR_B0001 bacteriocin YP_004091974.1 PFAM: ABC-3 protein; KEGG: tde:TDE2562 cation ABC transporter, permease protein, putative YP_004091975.1 KEGG: vpr:Vpar_0239 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004091976.1 PFAM: Protein of unknown function DUF2292; KEGG: cth:Cthe_2783 hypothetical protein YP_004091977.1 PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; KEGG: cth:Cthe_1567 dinitrogenase iron-molybdenum cofactor biosynthesis YP_004091978.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbe:Cbei_0621 nitrogenase YP_004091979.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: cbe:Cbei_0620 nitrogenase YP_004091980.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: cth:Cthe_1560 cystathionine beta-synthase (acetylserine-dependent) YP_004091981.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: ckr:CKR_1913 hypothetical protein YP_004091982.1 PFAM: Cys/Met metabolism pyridoxal-phosphate-dependent protein; KEGG: clj:CLJU_c24380 cystathione gamma-synthase YP_004091983.1 PFAM: aminotransferase class I and II; KEGG: cth:Cthe_2793 aminotransferase YP_004091984.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: pwa:Pecwa_1794 iron-containing alcohol dehydrogenase YP_004091985.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: yen:YE4182 ABC transporter permease YP_004091986.1 KEGG: yen:YE4181 ABC transporter; PFAM: ABC transporter related; NIL domain; SMART: AAA ATPase YP_004091987.1 PFAM: aminotransferase class I and II; KEGG: bmd:BMD_1233 transaminase YP_004091988.1 PFAM: NLPA lipoprotein; KEGG: yen:YE4180 hypothetical protein YP_004091990.1 KEGG: cce:Ccel_3326 hypothetical protein YP_004091991.1 PFAM: TOBE domain-containing protein; KEGG: swo:Swol_1190 molybdenum-pterin-binding protein YP_004091992.1 PFAM: short-chain dehydrogenase/reductase SDR; KEGG: gtn:GTNG_1256 3-ketoacyl-(acyl-carrier-protein) reductase YP_004091993.1 PFAM: glycosyl transferase family 2; KEGG: cbt:CLH_2276 bactoprenol glucosyl transferase YP_004091994.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: afn:Acfer_0865 iron-containing alcohol dehydrogenase YP_004091995.1 PFAM: protein of unknown function DUF161; Protein of unknown function DUF2179; KEGG: cac:CA_C1325 hypothetical protein YP_004091996.1 KEGG: sli:Slin_2449 DEAD/DEAH box helicase domain protein; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004091997.1 KEGG: ate:Athe_1992 hypothetical protein YP_004091998.1 KEGG: ate:Athe_1992 hypothetical protein YP_004091999.1 KEGG: dhd:Dhaf_4576 hypothetical protein YP_004092000.1 KEGG: cth:Cthe_1021 stage IV sporulation protein A; TIGRFAM: stage IV sporulation protein A; PFAM: Sporulation stage IV protein A YP_004092001.1 PFAM: Peptidoglycan-binding lysin domain; KEGG: cth:Cthe_2402 peptidoglycan-binding LysM YP_004092002.1 KEGG: cce:Ccel_1424 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_004092003.1 KEGG: cdl:CDR20291_2076 putative cNMP-binding regulatory protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004092004.1 PFAM: Radical SAM domain protein; KEGG: cac:CA_C3343 biotin synthase related domain-containing protein YP_004092005.1 KEGG: cac:CA_C3344 hypothetical protein YP_004092006.1 KEGG: gym:GYMC10_1698 ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein YP_004092007.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: gym:GYMC10_1697 binding-protein-dependent transport systems inner membrane component YP_004092008.1 KEGG: gym:GYMC10_1696 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092009.1 KEGG: cpy:Cphy_0985 hypothetical protein YP_004092010.1 PFAM: transposase IS200-family protein; KEGG: amr:AM1_C0253 IS200 family transposase YP_004092011.1 PFAM: Osmosensitive K channel His kinase sensor; UspA domain-containing protein; KEGG: tpd:Teth39_0496 osmosensitive K+ channel histidine kinase sensor subunit YP_004092012.1 TIGRFAM: potassium-transporting ATPase, C subunit; KEGG: cac:CA_C3680 potassium-transporting ATPase subunit C; PFAM: K transporting ATPase KdpC subunit YP_004092013.1 KEGG: cac:CA_C3681 potassium-transporting ATPase subunit B; TIGRFAM: K+-transporting ATPase, B subunit; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004092014.1 TIGRFAM: potassium-transporting ATPase, A subunit; KEGG: cac:CA_C3682 potassium-transporting ATPase subunit A; PFAM: K transporting ATPase A subunit YP_004092015.1 KEGG: ckl:CKL_0282 hypothetical protein YP_004092016.1 PFAM: NLP/P60 protein; KEGG: ckr:CKR_0237 hypothetical protein YP_004092017.1 KEGG: ckl:CKL_0284 hypothetical protein YP_004092018.1 KEGG: ckr:CKR_0239 hypothetical protein YP_004092019.1 PFAM: MT-A70 family protein; KEGG: spj:MGAS2096_Spy1128 adenine-specific methyltransferase YP_004092020.1 KEGG: ckr:CKR_0240 hypothetical protein YP_004092021.1 PFAM: SpoVG family protein; KEGG: ckr:CKR_0241 hypothetical protein YP_004092022.1 KEGG: ckr:CKR_0242 hypothetical protein YP_004092023.1 KEGG: ckl:CKL_0289 hypothetical protein YP_004092024.1 PFAM: TRAG family protein; KEGG: ckr:CKR_0243 hypothetical protein YP_004092025.1 KEGG: ckl:CKL_0291 hypothetical protein YP_004092026.1 KEGG: ckr:CKR_0244 hypothetical protein YP_004092027.1 PFAM: Antirestriction ArdA family protein; KEGG: ckr:CKR_0245 hypothetical protein YP_004092028.1 KEGG: ckr:CKR_0246 hypothetical protein YP_004092029.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: ckr:CKR_0247 hypothetical protein; SMART: ParB domain protein nuclease YP_004092030.1 KEGG: cac:CA_C3085 TPR repeat-containing cell adhesion protein YP_004092031.1 KEGG: bja:blr4055 hypothetical protein YP_004092032.1 KEGG: ele:Elen_2113 hypothetical protein YP_004092033.1 manually curated; PFAM: transcription regulator AsnC-type-like; regulatory protein MarR; KEGG: cbe:Cbei_2343 AsnC family transcriptional regulator; SMART: transcription regulator AsnC-type YP_004092034.1 KEGG: lin:lin2940 hypothetical protein YP_004092035.1 PFAM: protein of unknown function DUF218; KEGG: cno:NT01CX_1576 hypothetical protein YP_004092036.1 KEGG: cth:Cthe_2770 transposase IS116/IS110/IS902 YP_004092037.1 KEGG: cbe:Cbei_4358 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004092038.1 KEGG: gyc:GYMC61_0528 glycoside hydrolase clan GH-D; PFAM: glycoside hydrolase clan GH-D YP_004092039.1 PFAM: extracellular solute-binding protein family 1; KEGG: ere:EUBREC_0486 sugar ABC transporter substrate-binding protein YP_004092040.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ere:EUBREC_0487 ABC-type sugar transport system, permease component YP_004092041.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: ere:EUBREC_0488 sugar ABC transporter permease YP_004092042.1 KEGG: eel:EUBELI_01846 galactokinase; PFAM: Galactokinase galactose-binding domain; GHMP kinase YP_004092043.1 TIGRFAM: galactose-1-phosphate uridylyltransferase; KEGG: ate:Athe_0938 galactose-1-phosphate uridylyltransferase; PFAM: galactose-1-phosphate uridyl transferase domain protein YP_004092044.1 KEGG: sss:SSUSC84_1399 sucrose phosphorylase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004092046.1 PFAM: plasmid stabilization system; KEGG: slp:Slip_1158 addiction module toxin, RelE/StbE family YP_004092047.1 KEGG: hmo:HM1_2851 hypothetical protein; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin YP_004092048.1 PFAM: Recombinase; Resolvase domain; KEGG: cth:Cthe_0001 recombinase YP_004092049.1 KEGG: mch:Mchl_5119 DNA polymerase III chi subunit HolC YP_004092050.1 KEGG: dae:Dtox_3288 hypothetical protein YP_004092051.1 KEGG: dae:Dtox_3289 hypothetical protein YP_004092052.1 KEGG: spj:MGAS2096_Spy1144 hypothetical protein YP_004092053.1 KEGG: cth:Cthe_3235 hypothetical protein YP_004092054.1 KEGG: dae:Dtox_3418 hypothetical protein YP_004092055.1 KEGG: smb:smi_1114 hypothetical protein YP_004092056.1 KEGG: smb:smi_1115 hypothetical protein YP_004092057.1 KEGG: rsd:TGRD_039 type I restriction-modification system restriction subunit; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase YP_004092058.1 KEGG: nth:Nther_0795 N-6 DNA methylase; manually curated; PFAM: N-6 DNA methylase YP_004092059.1 PFAM: protein of unknown function DUF262; protein of unknown function DUF1524 RloF; KEGG: bad:BAD_0883 hypothetical protein YP_004092060.1 KEGG: cby:CLM_2298 DEAD/DEAH box helicase domain protein; PFAM: helicase domain protein; SMART: DEAD-like helicase ; helicase domain protein YP_004092061.1 KEGG: cby:CLM_2299 hypothetical protein YP_004092062.1 KEGG: tex:Teth514_1218 hypothetical protein; PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase YP_004092063.1 KEGG: tex:Teth514_1221 restriction modification system DNA specificity subunit YP_004092064.1 PFAM: N-6 DNA methylase; KEGG: mla:Mlab_0841 hypothetical protein YP_004092065.1 TIGRFAM: DNA binding domain protein, excisionase family; KEGG: tex:Teth514_1226 DNA binding domain-containing protein YP_004092066.1 KEGG: hha:Hhal_1869 putative transcriptional regulator YP_004092068.1 PFAM: Bacterio-opsin activator HTH domain protein; KEGG: det:DET1104 hypothetical protein YP_004092069.1 KEGG: det:DET1103 hypothetical protein YP_004092070.1 KEGG: det:DET1102 hypothetical protein YP_004092071.1 KEGG: det:DET1101 hypothetical protein YP_004092072.1 KEGG: afn:Acfer_1132 hypothetical protein YP_004092073.1 KEGG: det:DET1100 family A DNA-dependent DNA polymerase; PFAM: DNA-directed DNA polymerase; SMART: DNA-directed DNA polymerase YP_004092074.1 KEGG: det:DET0073 hypothetical protein YP_004092075.1 PFAM: Primase 1; KEGG: det:DET0072 phage/plasmid DNA primase, putative YP_004092076.1 KEGG: asa:ASA_P4G073 hypothetical protein YP_004092077.1 PFAM: VRR-NUC domain-containing protein; KEGG: det:DET1097 hypothetical protein YP_004092078.1 SMART: TRASH domain-containing protein; KEGG: amt:Amet_4047 HNH endonuclease YP_004092079.1 KEGG: det:DET1096 SNF2 domain-containing protein; PFAM: SNF2-related protein; SMART: DEAD-like helicase YP_004092080.1 KEGG: amt:Amet_4045 hypothetical protein YP_004092081.1 PFAM: sigma-70 region 4 domain protein; KEGG: bca:BCE_0388 hypothetical protein YP_004092082.1 KEGG: det:DET1094 HNH endonuclease domain-containing protein; PFAM: HNH endonuclease; SMART: HNH nuclease YP_004092083.1 KEGG: amt:Amet_4041 hypothetical protein YP_004092084.1 KEGG: afn:Acfer_1080 DNA methylase N-4/N-6 domain protein; PFAM: ParB domain protein nuclease; DNA methylase N-4/N-6 domain protein; SMART: ParB domain protein nuclease YP_004092085.1 KEGG: det:DET1091 virulence-related protein YP_004092086.1 KEGG: det:DET1090 hypothetical protein YP_004092087.1 manually curated; KEGG: det:DET1089 virulence-related protein YP_004092088.1 KEGG: amt:Amet_4035 hypothetical protein YP_004092089.1 KEGG: amt:Amet_4034 hypothetical protein YP_004092090.1 PFAM: Terminase; KEGG: det:DET1088 terminase, large subunit, putative YP_004092091.1 KEGG: det:DET1087 HK97 family portal protein , putative; TIGRFAM: phage portal protein, HK97 family; PFAM: portal protein YP_004092092.1 PFAM: peptidase S14 ClpP; KEGG: det:DET1086 ATP-dependent Clp protease, proteolytic subunit ClpP, putative YP_004092093.1 TIGRFAM: phage major capsid protein, HK97 family; KEGG: det:DET1085 HK97 family major capsid protein YP_004092094.1 TIGRFAM: uncharacterized phage protein (possible DNA packaging); KEGG: det:DET1084 DNA packaging protein, putative YP_004092095.1 TIGRFAM: phage head-tail adaptor; KEGG: det:DET1083 head-tail adaptor, putative YP_004092096.1 KEGG: det:DET1082 hypothetical protein YP_004092097.1 KEGG: det:DET1081 hypothetical protein YP_004092098.1 TIGRFAM: phage major tail protein, phi13 family; KEGG: det:DET1080 phi13 family major tail protein YP_004092099.1 KEGG: det:DET1079 hypothetical protein YP_004092100.1 KEGG: lwe:lwe1233 phage-like protein YP_004092101.1 KEGG: det:DET1078 TP901 family tail tape measure protein; TIGRFAM: phage tail tape measure protein, TP901 family; PFAM: tail tape measure protein TP901 core region YP_004092102.1 TIGRFAM: phage tail component; KEGG: hmo:HM1_2871 phage minor structural protein, N-terminal YP_004092103.1 TIGRFAM: phage minor structural protein; KEGG: cth:Cthe_1616 phage minor structural protein YP_004092104.1 KEGG: cth:Cthe_1615 hypothetical protein YP_004092105.1 KEGG: tex:Teth514_1267 hypothetical protein YP_004092106.1 KEGG: tex:Teth514_1268 glycosyl hydrolase-like protein YP_004092107.1 KEGG: det:DET1071 holin; TIGRFAM: toxin secretion/phage lysis holin; PFAM: Holin toxin secretion/phage lysis YP_004092108.1 KEGG: lga:LGAS_1488 lyzozyme M1 (1,4-beta-N-acetylmuramidase); PFAM: glycoside hydrolase family 25; Cpl-7 lysozyme domain protein; Peptidoglycan-binding lysin domain; SMART: Peptidoglycan-binding LysM; Glycoside hydrolase, family 25 subgroup YP_004092109.1 KEGG: ctc:CTC01932 hypothetical protein YP_004092110.1 KEGG: afn:Acfer_1157 hypothetical protein YP_004092111.1 PFAM: Resolvase domain; Recombinase; KEGG: afn:Acfer_1153 resolvase domain protein YP_004092112.1 PFAM: Resolvase domain; Recombinase; KEGG: spa:M6_Spy1124 site-specific recombinase YP_004092113.1 KEGG: tva:TVAG_410870 viral A-type inclusion protein YP_004092114.1 KEGG: aga:AgaP_AGAP006932 AGAP006932-PA YP_004092115.1 KEGG: bca:BCE_0997 hypothetical protein YP_004092116.1 KEGG: kpn:KPN_01441 hypothetical protein YP_004092117.1 KEGG: nth:Nther_0795 N-6 DNA methylase YP_004092118.1 KEGG: amt:Amet_4059 hypothetical protein YP_004092119.1 KEGG: ptm:GSPATT00004340001 hypothetical protein YP_004092120.1 KEGG: amt:Amet_0596 plasmid stabilization system protein YP_004092121.1 TIGRFAM: prevent-host-death family protein; KEGG: drm:Dred_2468 prevent-host-death family protein YP_004092122.1 KEGG: efa:EF2305 toprim domain-containing protein YP_004092123.1 KEGG: mac:MA3353 IstB helper protein; PFAM: IstB domain protein ATP-binding protein; SMART: AAA ATPase YP_004092124.1 KEGG: ctc:CTC01421 transcriptional regulatory component of sensory transduction system; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004092125.1 KEGG: cbi:CLJ_B0836 sensor histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004092126.1 KEGG: cbi:CLJ_B0832 ABC transporter, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092127.1 PFAM: protein of unknown function DUF214; KEGG: ctc:CTC01418 putative permease YP_004092128.1 KEGG: bmd:BMD_2225 GntR family transcriptional regulator YP_004092129.1 KEGG: ckl:CKL_0264 hypothetical protein YP_004092131.1 KEGG: spj:MGAS2096_Spy1158 chromosome partitioning protein ParA YP_004092132.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: spj:MGAS2096_Spy1142 chromosome partitioning protein ParB; SMART: ParB domain protein nuclease YP_004092133.1 KEGG: ele:Elen_2113 hypothetical protein YP_004092134.1 KEGG: amr:AM1_3691 hypothetical protein YP_004092135.1 KEGG: cac:CA_C3085 TPR repeat-containing cell adhesion protein YP_004092136.1 KEGG: cdf:CD1118 hypothetical protein YP_004092137.1 KEGG: dsy:DSY4671 hypothetical protein; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004092138.1 TIGRFAM: redox-active disulfide protein 2; KEGG: dae:Dtox_4282 redox-active disulfide protein 2 YP_004092139.1 KEGG: dsy:DSY4677 hypothetical protein YP_004092140.1 PFAM: permease; KEGG: pmo:Pmob_0731 permease YP_004092141.1 KEGG: dae:Dtox_4284 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004092142.1 KEGG: ckr:CKR_0246 hypothetical protein YP_004092143.1 KEGG: dhd:Dhaf_0657 hypothetical protein YP_004092144.1 KEGG: ere:EUBREC_3603 hypothetical protein YP_004092145.1 PFAM: TRAG family protein; KEGG: cdf:CD1115 putative conjugal transfer protein YP_004092146.1 KEGG: cdf:CD1113 putative conjugative transfer protein YP_004092147.1 KEGG: ckr:CKR_0242 hypothetical protein YP_004092148.1 KEGG: dae:Dtox_1490 hypothetical protein YP_004092149.1 KEGG: cdf:CD1111 hypothetical protein YP_004092150.1 KEGG: ere:EUBREC_3574 hypothetical protein YP_004092151.1 KEGG: ajs:Ajs_3985 hypothetical protein YP_004092152.1 PFAM: NLP/P60 protein; KEGG: ere:EUBREC_2717 putative lipoprotein YP_004092153.1 KEGG: ckl:CKL_0282 hypothetical protein YP_004092154.1 KEGG: ere:EUBREC_2719 hypothetical protein YP_004092155.1 KEGG: cdf:CD1106A hypothetical protein YP_004092156.1 TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain-containing protein; KEGG: efa:EF2312 DNA topoisomerase III; SMART: DNA topoisomerase I DNA-binding; DNA topoisomerase I ATP-binding; Toprim sub domain-containing protein YP_004092157.1 KEGG: cch:Cag_0275 NAD-dependent DNA ligase YP_004092158.1 KEGG: cdf:CD1105 putative DNA primase YP_004092159.1 KEGG: rmu:RMDY18_14060 DNA repair ATPase YP_004092160.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cpf:CPF_0711 acetyltransferase YP_004092161.1 SMART: DEAD-like helicase; KEGG: efa:EF2307 hypothetical protein YP_004092162.1 KEGG: mhu:Mhun_1355 hypothetical protein YP_004092163.1 KEGG: efa:EF2322 hypothetical protein YP_004092164.1 KEGG: clo:HMPREF0868_1330 hypothetical protein YP_004092165.1 KEGG: seq:SZO_12680 membrane protein YP_004092166.1 KEGG: bpl:BURPS1106A_3673 hypothetical protein YP_004092167.1 KEGG: plu:plu2708 hypothetical protein YP_004092168.1 PFAM: Relaxase/mobilization nuclease family protein; KEGG: ere:EUBREC_2727 hypothetical protein YP_004092169.1 KEGG: hmo:HM1_0624 hypothetical protein YP_004092170.1 PFAM: Conserved hypothetical protein CHP02391; KEGG: sdn:Sden_2057 hypothetical protein YP_004092171.1 KEGG: efa:EF1959 hypothetical protein YP_004092172.1 KEGG: bgr:Bgr_04100 type III restriction-modification system methylation subunit; PFAM: DNA methylase N-4/N-6 domain protein YP_004092173.1 PFAM: protein of unknown function DUF955; KEGG: nth:Nther_2518 protein of unknown function DUF955 YP_004092174.1 KEGG: mbt:JTY_2529 hypothetical protein YP_004092175.1 KEGG: bgr:Bgr_04110 putative type III restriction enzyme, res subunit; PFAM: type III restriction protein res subunit YP_004092176.1 KEGG: clj:CLJU_c20250 hypothetical protein; TIGRFAM: DNA binding domain protein, excisionase family; PFAM: regulatory protein MerR YP_004092177.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cbf:CLI_0981 DMT family permease YP_004092178.1 PFAM: Bacitracin resistance protein BacA; KEGG: clj:CLJU_c15920 undecaprenyl-diphosphatase YP_004092179.1 KEGG: cbk:CLL_A1426 probable cation-transporting ATPase E; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Haloacid dehalogenase domain protein hydrolase YP_004092180.1 KEGG: cpy:Cphy_1466 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004092181.1 KEGG: cpy:Cphy_1467 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004092182.1 PFAM: Sigma-70 region 4 type 2; KEGG: ere:EUBREC_2736 hypothetical protein YP_004092183.1 KEGG: cno:NT01CX_1246 ferredoxin YP_004092184.1 KEGG: cth:Cthe_0036 hydroxylamine reductase; TIGRFAM: hybrid cluster protein; PFAM: Prismane YP_004092185.1 PFAM: Rubredoxin-type Fe(Cys)4 protein; KEGG: cac:CA_C2778 rubredoxin YP_004092186.1 KEGG: tai:Taci_1482 putative cytoplasmic protein YP_004092187.1 KEGG: cth:Cthe_0035 4Fe-4S ferredoxin, iron-sulfur binding YP_004092188.1 KEGG: cth:Cthe_0034 cyclic nucleotide-binding protein; PFAM: cyclic nucleotide-binding; SMART: cyclic nucleotide-binding YP_004092189.1 KEGG: ctc:CTC00896 transcriptional regulatory protein; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: regulatory protein Crp YP_004092190.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: dak:DaAHT2_0846 2-hydroxyglutaryl-CoA dehydratase D-component YP_004092191.1 KEGG: tml:GSTUM_00003874001 hypothetical protein YP_004092192.1 KEGG: tdn:Suden_0274 4Fe-4S ferredoxin, iron-sulfur binding YP_004092193.1 PFAM: 2-hydroxyglutaryl-CoA dehydratase D-component; KEGG: aeh:Mlg_0785 2-hydroxyglutaryl-CoA dehydratase, D-component YP_004092194.1 TIGRFAM: CoA-substrate-specific enzyme activase; KEGG: dat:HRM2_43020 HgdC1; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_004092195.1 KEGG: dsy:DSY3417 hypothetical protein YP_004092196.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004092197.1 KEGG: dsy:DSY3291 hypothetical protein YP_004092198.1 manually curated; KEGG: ckl:CKL_0265 hypothetical protein YP_004092199.1 KEGG: dae:Dtox_1519 transcriptional regulator, XRE family; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004092200.1 PFAM: Sigma-70 region 4 type 2; KEGG: ere:EUBREC_2736 hypothetical protein YP_004092202.1 PFAM: Recombinase; Resolvase domain; KEGG: efa:EF2283 resolvase family site-specific recombinase YP_004092203.1 PFAM: Resolvase domain; Recombinase; KEGG: spj:MGAS2096_Spy1140 site-specific recombinase YP_004092204.1 PFAM: NLP/P60 protein; KEGG: aac:Aaci_2432 NLP/P60 protein YP_004092205.1 KEGG: cpy:Cphy_3426 NAD+ synthetase; TIGRFAM: NAD+ synthetase; PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; Queuosine synthesis-like YP_004092206.1 PFAM: protein of unknown function DUF1624; KEGG: apv:Apar_0771 protein of unknown function DUF1624 YP_004092207.1 PFAM: amidohydrolase 2; KEGG: tjr:TherJR_1661 amidohydrolase 2 YP_004092208.1 KEGG: mem:Memar_1750 outer membrane lipoprotein-sorting protein-like protein YP_004092209.1 KEGG: pth:PTH_0657 carbohydrate kinase; TIGRFAM: carbohydrate kinase, YjeF related protein; PFAM: protein of unknown function UPF0031; YjeF-family domain-containing protein YP_004092210.1 KEGG: adg:Adeg_1760 holo-acyl-carrier-protein synthase; TIGRFAM: holo-acyl-carrier-protein synthase; PFAM: 4'-phosphopantetheinyl transferase YP_004092211.1 KEGG: csc:Csac_1712 hypothetical protein YP_004092212.1 KEGG: bpo:BP951000_1548 hypothetical protein YP_004092213.1 PFAM: ATP:corrinoid adenosyltransferase BtuR/CobO/CobP; KEGG: cce:Ccel_1333 ATP:corrinoid adenosyltransferase BtuR/CobO/CobP YP_004092214.1 KEGG: pma:Pro0245 mismatch repair ATPase YP_004092215.1 KEGG: eel:EUBELI_20473 fructose-1,6-bisphosphatase III; PFAM: fructose-16-bisphosphatase YP_004092216.1 PFAM: NUDIX hydrolase; KEGG: atu:Atu3719 MutT/NUDIX family protein YP_004092217.1 PFAM: protein of unknown function DUF965; KEGG: drm:Dred_0773 hypothetical protein YP_004092218.1 KEGG: cth:Cthe_0215 phenylalanyl-tRNA synthetase subunit beta; TIGRFAM: phenylalanyl-tRNA synthetase, beta subunit YP_004092219.1 KEGG: cth:Cthe_0214 phenylalanyl-tRNA synthetase, alpha subunit; TIGRFAM: phenylalanyl-tRNA synthetase, alpha subunit; PFAM: phenylalanyl-tRNA synthetase class IIc; aminoacyl tRNA synthetase class II domain protein YP_004092220.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: bpu:BPUM_3026 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004092221.1 TIGRFAM: MutS2 family protein; PFAM: Smr protein/MutS2; DNA mismatch repair protein MutS domain protein; KEGG: cth:Cthe_1014 MutS2 family protein; SMART: DNA mismatch repair protein MutS domain protein; MutS III domain protein; Smr protein/MutS2 YP_004092222.1 SMART: adenylosuccinate synthetase; TIGRFAM: adenylosuccinate synthetase; KEGG: hmo:HM1_0977 adenylosuccinate synthetase; PFAM: adenylosuccinate synthetase YP_004092223.1 PFAM: Rubrerythrin; KEGG: csc:Csac_2430 rubrerythrin YP_004092224.1 PFAM: ferric-uptake regulator; KEGG: fnu:FN2045 ferric uptake regulation protein YP_004092225.1 PFAM: Heat shock protein Hsp90-like; ATP-binding region ATPase domain protein; KEGG: cce:Ccel_0492 heat shock protein 90 YP_004092226.1 TIGRFAM: CDP-diacylglycerol/glycerol-3-phosphate 3-phosphatidyltransferase; KEGG: cpy:Cphy_2454 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; PFAM: CDP-alcohol phosphatidyltransferase YP_004092227.1 TIGRFAM: MiaB-like tRNA modifying enzyme YliG; RNA modification enzyme, MiaB family; PFAM: protein of unknown function UPF0004 ; Radical SAM domain protein; KEGG: tte:TTE1377 2-methylthioadenine synthetase; SMART: Elongator protein 3/MiaB/NifB YP_004092228.1 KEGG: rxy:Rxyl_1424 regulatory protein RecX YP_004092229.1 TIGRFAM: recA protein; PFAM: RecA domain protein; KEGG: cno:NT01CX_2123 recombinase A; SMART: AAA ATPase YP_004092230.1 manually curated; PFAM: regulatory protein MarR; KEGG: cbi:CLJ_B1151 transcriptional regulator, MarR family; SMART: regulatory protein MarR YP_004092231.1 PFAM: major facilitator superfamily MFS_1; KEGG: ckr:CKR_0064 hypothetical protein YP_004092232.1 PFAM: Aluminium resistance family protein; KEGG: cth:Cthe_0794 aluminium resistance protein YP_004092233.1 KEGG: mxa:MXAN_4908 putative protein methyltransferase HemK; TIGRFAM: protein-(glutamine-N5) methyltransferase, release factor-specific; modification methylase, HemK family; PFAM: methyltransferase small YP_004092234.1 PFAM: protein of unknown function DUF1385; KEGG: sth:STH72 hypothetical protein YP_004092235.1 KEGG: drm:Dred_2640 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004092236.1 KEGG: bbe:BBR47_04090 two-component response regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004092237.1 KEGG: bbe:BBR47_04100 hypothetical protein YP_004092238.1 KEGG: cac:CA_C0966 hypothetical protein YP_004092239.1 KEGG: dfe:Dfer_2852 Cof-like hydrolase; TIGRFAM: Cof-like hydrolase; HAD-superfamily hydrolase, subfamily IIB; PFAM: Haloacid dehalogenase domain protein hydrolase type 3 YP_004092240.1 KEGG: cno:NT01CX_1194 hypothetical protein; TIGRFAM: sporulation protein YtaF; PFAM: protein of unknown function DUF204 YP_004092241.1 TIGRFAM: 1,4-alpha-glucan branching enzyme; PFAM: alpha amylase all-beta; glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; KEGG: afn:Acfer_0403 1,4-alpha-glucan branching enzyme; SMART: alpha amylase catalytic sub domain YP_004092242.1 KEGG: cbt:CLH_3163 glucose-1-phosphate adenylyltransferase; TIGRFAM: glucose-1-phosphate adenylyltransferase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_004092243.1 TIGRFAM: glucose-1-phosphate adenylyltransferase, GlgD subunit; KEGG: ere:EUBREC_2215 glucose-1-phosphate adenylyltransferase, GlgD subunit; PFAM: Nucleotidyl transferase YP_004092244.1 KEGG: cth:Cthe_0282 glycogen/starch synthases, ADP-glucose type; TIGRFAM: glycogen/starch synthase, ADP-glucose type; PFAM: Starch synthase catalytic domain-containing protein; glycosyl transferase group 1 YP_004092245.1 KEGG: amt:Amet_2945 glycogen/starch/alpha-glucan phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004092246.1 KEGG: drm:Dred_1458 alpha amylase, catalytic region; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain YP_004092247.1 KEGG: cpe:CPE0727 hypothetical protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004092248.1 KEGG: dae:Dtox_3127 glycosyl transferase family 2 YP_004092249.1 PFAM: glycosyl transferase family 2; KEGG: dae:Dtox_3123 hypothetical protein YP_004092250.1 KEGG: cbe:Cbei_1844 PTS system, fructose subfamily, IIC subunit; TIGRFAM: PTS system, fructose subfamily, IIC subunit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose-specific, IIB subunnit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; phosphotransferase system EIIC YP_004092251.1 PFAM: PfkB domain protein; KEGG: tmt:Tmath_1672 PfkB domain protein YP_004092252.1 PFAM: protein of unknown function DUF795; KEGG: slp:Slip_0901 protein of unknown function DUF795 YP_004092253.1 KEGG: tnp:Tnap_0904 acetate kinase; TIGRFAM: acetate kinase; PFAM: acetate and butyrate kinase YP_004092254.1 PFAM: protein of unknown function DUF378; KEGG: amt:Amet_2334 hypothetical protein YP_004092255.1 KEGG: cbl:CLK_3764 large conductance mechanosensitive channel protein; TIGRFAM: large conductance mechanosensitive channel protein; PFAM: large-conductance mechanosensitive channel YP_004092256.1 PFAM: Phosphomethylpyrimidine kinase type-1; KEGG: pdi:BDI_1722 pyridoxal kinase, putative YP_004092257.1 KEGG: cth:Cthe_2665 Zn-finger containing protein YP_004092258.1 KEGG: pth:PTH_2361 hypothetical protein YP_004092259.1 PFAM: glycosyl transferase family 2; KEGG: cth:Cthe_1788 glycosyl transferase family protein YP_004092260.1 KEGG: dhd:Dhaf_2109 histidinol phosphate phosphatase HisJ family; TIGRFAM: histidinol phosphate phosphatase HisJ family; PFAM: PHP domain protein YP_004092261.1 PFAM: amino acid-binding ACT domain protein; KEGG: cce:Ccel_1723 hypothetical protein YP_004092262.1 PFAM: protein of unknown function DUF711; KEGG: cce:Ccel_1722 hypothetical protein YP_004092263.1 KEGG: acl:ACL_1175 hypothetical protein YP_004092264.1 PFAM: H+transporting two-sector ATPase C (AC39) subunit; KEGG: acl:ACL_1174 V-type H+-transporting ATPase, subunit C YP_004092265.1 PFAM: V-type ATPase 116 kDa subunit; KEGG: cpy:Cphy_3446 V-type ATPase 116 kDa subunit YP_004092266.1 PFAM: H+transporting two-sector ATPase C subunit; KEGG: ctc:CTC02330 putative ATPase related protein YP_004092267.1 PFAM: Vacuolar H+transporting two-sector ATPase F subunit; KEGG: cpy:Cphy_3444 vacuolar H+transporting two-sector ATPase F subunit YP_004092268.1 KEGG: mvu:Metvu_1611 H+transporting two-sector ATPase E subunit YP_004092269.1 KEGG: cpy:Cphy_3442 V-type ATP synthase subunit A; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein YP_004092270.1 PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: cpy:Cphy_3441 V-type ATP synthase subunit B YP_004092271.1 KEGG: ctc:CTC02326 V-type sodium ATP synthase subunit D; TIGRFAM: V-type ATPase, D subunit; PFAM: H+transporting two-sector ATPase D subunit YP_004092272.1 KEGG: dsy:DSY4671 hypothetical protein; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004092273.1 TIGRFAM: redox-active disulfide protein 2; KEGG: dae:Dtox_4282 redox-active disulfide protein 2 YP_004092274.1 PFAM: permease; KEGG: dae:Dtox_4283 permease YP_004092275.1 KEGG: dae:Dtox_4284 transcriptional regulator, ArsR family; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004092276.1 KEGG: str:Sterm_1078 hypothetical protein; TIGRFAM: Protein of unknown function DUF2196; PFAM: Protein of unknown function DUF2196 YP_004092277.1 KEGG: amt:Amet_0775 2'-5' RNA ligase; TIGRFAM: 2'-5' RNA ligase; PFAM: Phosphoesterase HXTX YP_004092278.1 PFAM: protein of unknown function DUF503; KEGG: cpy:Cphy_1545 hypothetical protein YP_004092279.1 TIGRFAM: diguanylate cyclase; PFAM: EAL domain protein; CBS domain containing protein; GGDEF domain containing protein; KEGG: aoe:Clos_0999 diguanylate cyclase/phosphodiesterase; SMART: EAL domain protein; GGDEF domain containing protein YP_004092280.1 PFAM: glycosyl transferase family 39; KEGG: fsu:Fisuc_0826 hypothetical protein YP_004092281.1 PFAM: protein of unknown function DUF344; KEGG: str:Sterm_1928 protein of unknown function DUF344 YP_004092282.1 PFAM: Methyltransferase type 11; KEGG: mba:Mbar_A0314 putative methyltransferase YP_004092283.1 KEGG: dda:Dd703_2394 fibronectin type III domain protein YP_004092284.1 PFAM: aminoglycoside phosphotransferase; KEGG: mgi:Mflv_1236 aminoglycoside phosphotransferase YP_004092285.1 PFAM: protein of unknown function DUF988; KEGG: amt:Amet_0013 hypothetical protein YP_004092286.1 PFAM: SirA-like domain-containing protein; KEGG: cth:Cthe_2542 SirA-like protein YP_004092287.1 SMART: Mov34/MPN/PAD-1 family protein; KEGG: csc:Csac_1636 Mov34/MPN/PAD-1 family protein YP_004092288.1 PFAM: UBA/THIF-type NAD/FAD binding protein; MoeZ/MoeB domain protein; KEGG: cth:Cthe_2539 UBA/ThiF-type NAD/FAD binding fold YP_004092289.1 PFAM: ROK family protein; KEGG: dhd:Dhaf_4114 ROK family protein YP_004092290.1 KEGG: ptm:GSPATT00017846001 hypothetical protein YP_004092291.1 KEGG: btb:BMB171_C0671 hypothetical protein YP_004092292.1 PFAM: nitroreductase; KEGG: nth:Nther_1558 nitroreductase YP_004092293.1 KEGG: rmr:Rmar_2454 heavy metal translocating P-type ATPase YP_004092294.1 KEGG: cce:Ccel_3320 RNA methyltransferase, TrmH family, group 3; TIGRFAM: RNA methyltransferase, TrmH family, group 3; PFAM: tRNA/rRNA methyltransferase (SpoU); RNA 2-O ribose methyltransferase substrate binding YP_004092295.1 KEGG: spa:M6_Spy1599 uridine phosphorylase; TIGRFAM: uridine phosphorylase; PFAM: purine or other phosphorylase family 1 YP_004092296.1 KEGG: dra:DR_2463 transport protein, putative YP_004092297.1 KEGG: cth:Cthe_0445 cell division protein FtsZ; TIGRFAM: cell division protein FtsZ; PFAM: Tubulin/FtsZ GTPase; Tubulin/FtsZ, 2-layer sandwich domain YP_004092298.1 PFAM: Polypeptide-transport-associated domain protein FtsQ-type; KEGG: cgt:cgR_2038 hypothetical protein YP_004092299.1 KEGG: amt:Amet_2878 UDP-N-acetylglucosamine 1-carboxyvinyltransferase; TIGRFAM: UDP-N-acetylglucosamine 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004092300.1 PFAM: cell cycle protein; KEGG: cth:Cthe_0975 stage V sporulation protein E YP_004092301.1 KEGG: pth:PTH_1864 phospho-N-acetylmuramoyl-pentapeptide-transferase; TIGRFAM: phospho-N-acetylmuramoyl-pentapeptide-transferase; PFAM: Glycosyl transferase, family 4, conserved region; Phospho-N-acetylmuramoyl-pentapeptide transferase, conserved site YP_004092302.1 KEGG: cth:Cthe_0977 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase; TIGRFAM: UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate/D-alanyl-D-alanyl ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004092303.1 KEGG: cth:Cthe_0978 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; TIGRFAM: UDP-N-acetylmuramyl-tripeptide synthetase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004092304.1 PFAM: penicillin-binding protein transpeptidase; Penicillin-binding protein dimerisation domain; PASTA domain containing protein; KEGG: csc:Csac_0919 stage V sporulation protein D; SMART: PASTA domain containing protein YP_004092305.1 KEGG: dau:Daud_1443 septum formation initiator YP_004092306.1 KEGG: hmo:HM1_2051 S-adenosyl-methyltransferase MraW; TIGRFAM: S-adenosyl-methyltransferase MraW; PFAM: methyltransferase YP_004092307.1 KEGG: cth:Cthe_0982 cell division protein MraZ; TIGRFAM: MraZ protein; PFAM: MraZ domain YP_004092308.1 KEGG: tjr:TherJR_2085 hypothetical protein YP_004092309.1 TIGRFAM: pantetheine-phosphate adenylyltransferase; cytidyltransferase-related domain protein; KEGG: npu:Npun_R3950 phosphopantetheine adenylyltransferase; PFAM: cytidylyltransferase YP_004092310.1 KEGG: cth:Cthe_1277 putative methyltransferase; TIGRFAM: methyltransferase; PFAM: Conserved hypothetical protein CHP00095 YP_004092311.1 TIGRFAM: excinuclease ABC, C subunit; PFAM: excinuclease ABC C subunit domain protein; Excinuclease ABC C subunit domain protein; UvrB/UvrC protein; helix-hairpin-helix motif; KEGG: cth:Cthe_2737 excinuclease ABC subunit C; SMART: Excinuclease ABC C subunit domain protein; Helix-hairpin-helix DNA-binding class 1 YP_004092312.1 KEGG: tte:TTE1820 phosphotransferase system, HPr-related proteins; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004092313.1 TIGRFAM: tRNA (guanine-N1)-methyltransferase; KEGG: cth:Cthe_0766 tRNA (guanine37-N1) methyltransferase; PFAM: tRNA (guanine-N1-)-methyltransferase YP_004092314.1 KEGG: sti:Sthe_1868 16S rRNA processing protein RimM; TIGRFAM: 16S rRNA processing protein RimM; PFAM: RimM protein; PRC-barrel domain protein YP_004092315.1 KEGG: mpe:MYPE7560 hypothetical protein YP_004092316.1 KEGG: cbe:Cbei_1177 hypothetical protein YP_004092317.1 KEGG: cth:Cthe_0769 30S ribosomal protein S16; TIGRFAM: ribosomal protein S16; PFAM: ribosomal protein S16 YP_004092318.1 TIGRFAM: signal recognition particle protein; PFAM: GTP-binding signal recognition particle SRP54 G- domain; GTP-binding signal recognition particle SRP54 helical bundle; Signal peptide binding (SRP54) M- domain protein; KEGG: aoe:Clos_1463 signal recognition particle protein; SMART: AAA ATPase YP_004092319.1 PFAM: helix-turn-helix protein YlxM/p13 family protein; KEGG: cth:Cthe_0771 putative helix-turn-helix protein, YlxM/p13-like protein YP_004092320.1 KEGG: cbe:Cbei_0137 50S ribosomal protein L33; TIGRFAM: ribosomal protein L33; PFAM: ribosomal protein L33 YP_004092321.1 KEGG: saq:Sare_4331 preprotein translocase, SecE subunit; TIGRFAM: preprotein translocase, SecE subunit; PFAM: protein secE/sec61-gamma protein YP_004092322.1 TIGRFAM: transcription termination/antitermination factor NusG; PFAM: NGN domain-containing protein; KOW domain protein; KEGG: cce:Ccel_0307 NusG antitermination factor; SMART: NGN domain-containing protein YP_004092323.1 TIGRFAM: ribosomal protein L11; PFAM: Ribosomal protein L11-like; KEGG: cth:Cthe_2720 50S ribosomal protein L11; SMART: ribosomal protein L11 YP_004092324.1 KEGG: cth:Cthe_2721 50S ribosomal protein L1; TIGRFAM: ribosomal protein L1; PFAM: ribosomal protein L1 YP_004092325.1 PFAM: ribosomal protein L10; KEGG: cce:Ccel_0310 ribosomal protein L10 YP_004092326.1 KEGG: ate:Athe_1528 ribosomal protein L7/L12; TIGRFAM: ribosomal protein L7/L12; PFAM: Ribosomal protein L7/L12 YP_004092327.1 PFAM: O-antigen polymerase; KEGG: smb:smi_0513 hypothetical protein YP_004092328.1 TIGRFAM: transcription-repair coupling factor; PFAM: transcription factor CarD; DEAD/DEAH box helicase domain protein; helicase domain protein; TRCF domain protein; KEGG: tte:TTE2565 transcription-repair coupling factor; SMART: DEAD-like helicase ; helicase domain protein YP_004092329.1 TIGRFAM: peptidyl-tRNA hydrolase; KEGG: tte:TTE2567 peptidyl-tRNA hydrolase; PFAM: peptidyl-tRNA hydrolase YP_004092330.1 TIGRFAM: ribose-phosphate pyrophosphokinase; KEGG: cth:Cthe_2630 ribose-phosphate pyrophosphokinase; PFAM: phosphoribosyltransferase YP_004092331.1 KEGG: tte:TTE2572 N-acetylglucosamine-1-phosphate uridyltransferase; TIGRFAM: UDP-N-acetylglucosamine pyrophosphorylase; PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein YP_004092332.1 PFAM: CheC domain protein; KEGG: cdf:CD0534 chemotaxis protein CheC YP_004092333.1 KEGG: slp:Slip_0981 CheD, stimulates methylation of MCP proteins; PFAM: CheD family protein YP_004092334.1 KEGG: cno:NT01CX_0443 xylanase/chitin deacetilase; PFAM: polysaccharide deacetylase; Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein YP_004092335.1 KEGG: lbr:LVIS_0457 ribonuclease M5; PFAM: TOPRIM domain-containing protein; SMART: Toprim sub domain-containing protein YP_004092336.1 KEGG: gtn:GTNG_2449 DNA polymerase III subunit delta; TIGRFAM: DNA polymerase III, delta subunit; PFAM: DNA polymerase III delta YP_004092337.1 KEGG: sth:STH473 ComE-like competence protein; TIGRFAM: ComEC/Rec2-related protein; polymorphic outer membrane protein; PFAM: ComEC/Rec2-related protein YP_004092338.1 PFAM: phosphoribosyltransferase; KEGG: fnu:FN2073 adenine phosphoribosyltransferase YP_004092339.1 PFAM: histidine triad (HIT) protein; KEGG: fma:FMG_0775 HIT family hydrolase YP_004092340.1 KEGG: cce:Ccel_2096 alanyl-tRNA synthetase; TIGRFAM: alanyl-tRNA synthetase; PFAM: Alanyl-tRNA synthetase, class IIc-like; Threonyl/alanyl tRNA synthetase SAD; phosphoesterase DHHA1 YP_004092341.1 KEGG: gur:Gura_3328 ABC-type Fe3+ transport system periplasmic component-like protein YP_004092342.1 KEGG: clj:CLJU_c17170 putative Fe3+ ABC transporter periplasmic protein YP_004092343.1 KEGG: aoe:Clos_0222 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092344.1 PFAM: cobalamin synthesis protein P47K; KEGG: aoe:Clos_0221 hypothetical protein YP_004092345.1 PFAM: superoxide dismutase copper/zinc binding; KEGG: cno:NT01CX_1771 superoxide dismutase YP_004092346.1 PFAM: polysaccharide deacetylase; KEGG: cce:Ccel_0883 polysaccharide deacetylase YP_004092347.1 KEGG: tet:TTHERM_00653770 SCP-like extracellular protein YP_004092348.1 KEGG: kfl:Kfla_0221 sucraseferredoxin family protein YP_004092349.1 PFAM: major facilitator superfamily MFS_1; KEGG: bwe:BcerKBAB4_0373 major facilitator transporter YP_004092350.1 TIGRFAM: GTP cyclohydrolase I; KEGG: tpd:Teth39_0319 GTP cyclohydrolase I; PFAM: GTP cyclohydrolase I/Nitrile oxidoreductase YP_004092351.1 TIGRFAM: dihydropteroate synthase; KEGG: cth:Cthe_2581 dihydropteroate synthase; PFAM: dihydropteroate synthase DHPS YP_004092352.1 TIGRFAM: dihydroneopterin aldolase; KEGG: tjr:TherJR_0211 dihydroneopterin aldolase; PFAM: dihydroneopterin aldolase YP_004092353.1 TIGRFAM: 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; KEGG: cth:Cthe_2583 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; PFAM: 78-dihydro-6-hydroxymethylpterin-pyrophosphokinase HPPK YP_004092354.1 PFAM: major facilitator superfamily MFS_1; KEGG: pjd:Pjdr2_4539 major facilitator superfamily MFS_1 YP_004092355.1 KEGG: mea:Mex_1p1200 putative fused thiol:disulfide interchange protein precursor YP_004092356.1 KEGG: tpd:Teth39_1310 thiamine pyrophosphokinase; TIGRFAM: thiamine pyrophosphokinase; PFAM: Thiamin pyrophosphokinase catalytic domain-containing protein YP_004092357.1 KEGG: gym:GYMC10_1956 ribosome small subunit-dependent GTPase A; TIGRFAM: ribosome small subunit-dependent GTPase A; PFAM: GTPase EngC YP_004092358.1 KEGG: cth:Cthe_0574 serine/threonine protein kinase; PFAM: Serine/threonine-protein kinase-like domain; PASTA domain containing protein; SMART: serine/threonine protein kinase; Tyrosine-protein kinase, catalytic domain; PASTA domain containing protein YP_004092359.1 KEGG: aac:Aaci_1324 protein serine/threonine phosphatase; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein YP_004092360.1 manually curated; TIGRFAM: radical SAM enzyme, Cfr family; KEGG: cth:Cthe_0572 ribosomal RNA large subunit methyltransferase N; PFAM: Radical SAM domain protein YP_004092361.1 KEGG: sth:STH1349 hypothetical protein; TIGRFAM: sun protein; PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44 YP_004092362.1 TIGRFAM: methionyl-tRNA formyltransferase; KEGG: gur:Gura_0819 methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein YP_004092363.1 KEGG: ate:Athe_1039 peptide deformylase; TIGRFAM: peptide deformylase; PFAM: formylmethionine deformylase YP_004092364.1 TIGRFAM: primosomal protein N'; PFAM: DEAD/DEAH box helicase domain protein; helicase domain protein; KEGG: gct:GC56T3_2384 primosomal protein N'; SMART: DEAD-like helicase ; helicase domain protein YP_004092365.1 TIGRFAM: DNA-directed RNA polymerase, omega subunit; KEGG: amt:Amet_2789 DNA-directed RNA polymerase subunit omega YP_004092366.1 SMART: guanylate kinase/L-type calcium channel region; TIGRFAM: guanylate kinase; KEGG: bbe:BBR47_37340 guanylate kinase; PFAM: guanylate kinase YP_004092367.1 PFAM: protein of unknown function DUF370; KEGG: clj:CLJU_c12510 hypothetical protein YP_004092368.1 PFAM: YicC-like domain-containing protein; domain of unknown function DUF1732; KEGG: cth:Cthe_1317 hypothetical protein YP_004092369.1 KEGG: adg:Adeg_1292 pseudouridine synthase; PFAM: pseudouridine synthase; RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein YP_004092370.1 PFAM: peptidase S11 D-alanyl-D-alanine carboxypeptidase 1; Penicillin-binding protein 5 domain protein; KEGG: tmt:Tmath_1179 serine-type D-Ala-D-Ala carboxypeptidase YP_004092371.1 KEGG: aoe:Clos_1582 sporulation protein YtfJ; TIGRFAM: sporulation protein YtfJ; PFAM: Sporulation protein YtfJ YP_004092372.1 KEGG: aac:Aaci_1734 hypothetical protein YP_004092373.1 KEGG: rrs:RoseRS_4629 putative transcriptional regulator; TIGRFAM: segregation and condensation protein B; PFAM: chromosome segregation and condensation protein ScpB YP_004092374.1 PFAM: chromosome segregation and condensation protein ScpA; KEGG: bcy:Bcer98_2757 segregation and condensation protein A YP_004092375.1 PFAM: peptidase M50; KEGG: aoe:Clos_2309 peptidase M50 YP_004092376.1 KEGG: dhd:Dhaf_3628 hypothetical protein YP_004092377.1 PFAM: protein of unknown function DUF195; KEGG: mca:MCA0339 hypothetical protein YP_004092378.1 KEGG: pjd:Pjdr2_6041 hypothetical protein YP_004092379.1 PFAM: flagellar hook-associated 2 domain-containing protein; KEGG: ddi:DDB_G0271670 hypothetical protein YP_004092380.1 KEGG: eel:EUBELI_20336 hypothetical protein YP_004092381.1 PFAM: helix-turn-helix HxlR type; KEGG: cbe:Cbei_0347 HxlR family transcriptional regulator YP_004092382.1 KEGG: bmq:BMQ_3824 hypothetical protein YP_004092383.1 KEGG: bth:BT_4755 putative two-component system sensor histidine kinase, putative heat shock protein YP_004092384.1 KEGG: sag:SAG1283 agglutinin receptor YP_004092385.1 KEGG: bma:BMA1027 outer membrane protein, putative YP_004092386.1 KEGG: cth:Cthe_1408 two component transcriptional regulator; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004092387.1 KEGG: cth:Cthe_1409 periplasmic sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein YP_004092388.1 TIGRFAM: 5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; KEGG: ckr:CKR_1636 5-methyltetrahydropteroyltriglutamate--homocysteine S-methyltransferase; PFAM: Methionine synthase vitamin-B12 independent; Cobalamin-independent synthase MetE domain protein YP_004092389.1 KEGG: alv:Alvin_0420 hypothetical protein YP_004092390.1 KEGG: cce:Ccel_2324 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004092391.1 KEGG: cce:Ccel_2323 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092392.1 KEGG: cce:Ccel_2322 hypothetical protein YP_004092393.1 KEGG: cce:Ccel_2321 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; SMART: histidine kinase A domain protein; ATP-binding region ATPase domain protein YP_004092394.1 PFAM: nitrogen regulatory protein P-II; KEGG: dde:Dde_2310 nitrogen regulatory protein P-II (GlnB, GlnK) YP_004092395.1 PFAM: protein of unknown function DUF1646; KEGG: cce:Ccel_1109 protein of unknown function DUF1646 YP_004092396.1 KEGG: tjr:TherJR_0705 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004092397.1 KEGG: tjr:TherJR_0704 hypothetical protein YP_004092398.1 KEGG: tna:CTN_0103 hypothetical protein YP_004092399.1 KEGG: phu:Phum_PHUM361870 zinc finger protein, putative YP_004092400.1 PFAM: multi antimicrobial extrusion protein MatE; KEGG: gym:GYMC10_2313 MATE efflux family protein YP_004092401.1 PFAM: lipolytic protein G-D-S-L family; KEGG: tpd:Teth39_2204 GDSL family lipase YP_004092402.1 KEGG: pth:PTH_0185 hypothetical protein; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R YP_004092403.1 KEGG: tpd:Teth39_1063 peptidoglycan glycosyltransferase; PFAM: penicillin-binding protein transpeptidase YP_004092405.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; FAD dependent oxidoreductase; KEGG: cja:CJA_1620 hypothetical protein YP_004092406.1 PFAM: TOBE domain-containing protein; KEGG: fre:Franean1_3905 TOBE domain-containing protein YP_004092407.1 KEGG: ckr:CKR_2144 hypothetical protein; PFAM: iron dependent repressor; SMART: iron dependent repressor YP_004092408.1 KEGG: cce:Ccel_0590 GTP-dependent nucleic acid-binding protein EngD; TIGRFAM: GTP-binding protein YchF; PFAM: protein of unknown function DUF933; GTP-binding protein HSR1-related YP_004092409.1 KEGG: sth:STH1400 transcriptional repressor, BirA-like; TIGRFAM: biotin/acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; biotin protein ligase domain protein YP_004092410.1 KEGG: pyo:PY07470 ribosome releasing factor YP_004092411.1 KEGG: aau:AAur_0008 putative integral membrane protein YP_004092412.1 KEGG: oaa:100090447 hypothetical protein LOC100090447 YP_004092413.1 KEGG: cth:Cthe_3070 hypothetical protein; TIGRFAM: sporulation protein YyaC; PFAM: protein of unknown function DUF1256 YP_004092414.1 PFAM: Uroporphyrin-III C/tetrapyrrole (Corrin/Porphyrin) methyltransferase; KEGG: cce:Ccel_0163 uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase YP_004092415.1 PFAM: methyltransferase small; KEGG: tjr:TherJR_0090 methyltransferase type 11 YP_004092416.1 KEGG: cce:Ccel_0161 4Fe-4S ferredoxin iron-sulfur binding domain protein YP_004092417.1 PFAM: PSP1 domain protein; KEGG: cce:Ccel_0160 PSP1 domain protein YP_004092418.1 KEGG: glo:Glov_1136 sporulation domain protein YP_004092419.1 KEGG: pth:PTH_0063 DNA polymerase III, gamma/tau subunits YP_004092420.1 PFAM: protein of unknown function DUF970; KEGG: ate:Athe_0513 protein of unknown function DUF970 YP_004092421.1 KEGG: pth:PTH_0061 arginine/lysine/ornithine decarboxylases; PFAM: Orn/Lys/Arg decarboxylase major region; Orn/Lys/Arg decarboxylase domain protein YP_004092422.1 TIGRFAM: alanine racemase; KEGG: slp:Slip_2314 alanine racemase; PFAM: alanine racemase domain protein YP_004092423.1 PFAM: Methicillin resistance protein; KEGG: mta:Moth_2408 methicillin resistance protein YP_004092424.1 PFAM: Shikimate/quinate 5-dehydrogenase; KEGG: cth:Cthe_0420 dipicolinate synthase subunit A YP_004092425.1 KEGG: dhd:Dhaf_3661 dipicolinate synthase subunit B; TIGRFAM: dipicolinic acid synthetase, B subunit; PFAM: flavoprotein YP_004092426.1 KEGG: cbf:CLI_0611 calcium-translocating P-type ATPase, PMCA-type; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; cation transporting ATPase domain protein; Haloacid dehalogenase domain protein hydrolase YP_004092427.1 KEGG: efa:EF2657 hypothetical protein YP_004092428.1 TIGRFAM: transcriptional activator, Baf family; KEGG: eel:EUBELI_01157 type III pantothenate kinase; PFAM: Bvg accessory factor YP_004092429.1 PFAM: PspC domain protein; KEGG: tmt:Tmath_1410 phage shock protein C, PspC YP_004092430.1 PFAM: ferric-uptake regulator; KEGG: cth:Cthe_0546 ferric uptake regulator family protein YP_004092431.1 TIGRFAM: primosome, DnaD subunit; KEGG: eel:EUBELI_01920 hypothetical protein YP_004092432.1 SMART: AAA ATPase; KEGG: tte:TTE2693 DNA replication protein DnaC YP_004092433.1 KEGG: cth:Cthe_1286 peptidase S1 and S6, chymotrypsin/Hap; PFAM: peptidase S1 and S6 chymotrypsin/Hap; SMART: PDZ/DHR/GLGF domain protein YP_004092434.1 KEGG: cth:Cthe_2273 hypothetical protein YP_004092435.1 KEGG: cth:Cthe_2272 hypothetical protein YP_004092436.1 KEGG: cth:Cthe_0354 putative CoA-substrate-specific enzyme activase; TIGRFAM: CoA-substrate-specific enzyme activase; PFAM: ATPase BadF/BadG/BcrA/BcrD type YP_004092437.1 PFAM: aldo/keto reductase; KEGG: bcl:ABC3477 2,5-didehydrogluconate reductase YP_004092438.1 PFAM: SCP-like extracellular; KEGG: cbi:CLJ_B2216 SCP-like extracellular protein YP_004092439.1 PFAM: Polynucleotide adenylyltransferase region; KEGG: afw:Anae109_2353 tRNA cytidylyltransferase YP_004092440.1 PFAM: Monogalactosyldiacylglycerol synthase; Glycosyltransferase 28 domain; KEGG: cbl:CLK_3302 hypothetical protein YP_004092441.1 PFAM: Nucleotidyl transferase; KEGG: cbi:CLJ_B3379 UTP-glucose-1-phosphate uridylyltransferase YP_004092442.1 KEGG: cce:Ccel_2206 hypothetical protein; TIGRFAM: peptide chain release factor 2; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004092443.1 KEGG: swo:Swol_0918 hypothetical protein YP_004092444.1 KEGG: cce:Ccel_1356 hypothetical protein YP_004092445.1 PFAM: cell wall hydrolase SleB; KEGG: cby:CLM_3319 putative cell wall hydrolase YP_004092446.1 KEGG: cbe:Cbei_2061 ammonium transporter; TIGRFAM: ammonium transporter; PFAM: ammonium transporter YP_004092447.1 PFAM: nitrogen regulatory protein P-II; KEGG: cbe:Cbei_5033 nitrogen regulatory protein P-II YP_004092448.1 KEGG: cac:CA_C2392 ABC transporter ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004092449.1 KEGG: cac:CA_C2393 ABC transporter ATPase; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004092450.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_2143 LysR family transcriptional regulator YP_004092451.1 KEGG: cce:Ccel_2209 transcriptional regulator, AsnC family; PFAM: transcription regulator AsnC-type-like; SMART: transcription regulator AsnC-type YP_004092452.1 PFAM: aminotransferase class I and II; KEGG: ere:EUBREC_3003 aspartate aminotransferase YP_004092453.1 KEGG: amt:Amet_3611 hypothetical protein YP_004092454.1 TIGRFAM: 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; KEGG: slp:Slip_0101 4-diphosphocytidyl-2C-methyl-D-erythritol kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004092455.1 PFAM: Methyltransferase type 11; KEGG: aac:Aaci_2174 methyltransferase type 11 YP_004092456.1 KEGG: cth:Cthe_2748 SsrA-binding protein; TIGRFAM: SsrA-binding protein; PFAM: SmpB protein YP_004092457.1 KEGG: cpy:Cphy_3014 acetyl esterase YP_004092458.1 KEGG: clj:CLJU_c07670 hypothetical protein YP_004092459.1 KEGG: ctc:CTC01070 DNA-binding protein; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004092460.1 PFAM: SNARE associated Golgi protein; KEGG: cbe:Cbei_4208 SNARE associated golgi protein YP_004092461.1 KEGG: lmo:lmo1974 hypothetical protein; PFAM: UbiC transcription regulator-associated domain-containing protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004092462.1 TIGRFAM: deoxyribose-phosphate aldolase; KEGG: seu:SEQ_1059 deoxyribose-phosphate aldolase; PFAM: deoxyribose-phosphate aldolase/phospho-2-dehydro-3-deoxyheptonate aldolase YP_004092463.1 PFAM: Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: abu:Abu_1042 NADP-dependent alcohol dehydrogenase YP_004092464.1 KEGG: mes:Meso_1111 hypothetical protein YP_004092465.1 KEGG: tit:Thit_0434 transcriptional regulator, GntR family; PFAM: regulatory protein GntR HTH; UbiC transcription regulator-associated domain-containing protein; SMART: regulatory protein GntR HTH YP_004092466.1 PFAM: extracellular solute-binding protein family 1; KEGG: ctc:CTC00274 iron(III)-binding periplasmic protein precursor YP_004092467.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sth:STH3218 ABC transporter permease protein YP_004092468.1 KEGG: gtn:GTNG_0623 spermidine/putrescine ABC transporter ATP-binding protein; PFAM: ABC transporter related; transport-associated OB domain-containing protein; SMART: AAA ATPase YP_004092469.1 KEGG: hor:Hore_14040 beta-lactamase domain protein YP_004092470.1 PFAM: transcriptional regulator PadR family protein; KEGG: cdf:CD3209 PadR-family transcriptional regulator YP_004092471.1 PFAM: NAD(P)H dehydrogenase (quinone); KEGG: pca:Pcar_2448 iron-sulfur flavoprotein YP_004092472.1 PFAM: YibE/F family protein; KEGG: pjd:Pjdr2_0311 YibE/F family protein YP_004092473.1 PFAM: Gram-positive anchor; metallophosphoesterase; KEGG: bcb:BCB4264_A0869 purple acid phosphatase/fibronectin domain protein YP_004092474.1 manually curated; KEGG: csc:Csac_2372 hypothetical protein YP_004092476.1 KEGG: dhd:Dhaf_1141 hypothetical protein YP_004092477.1 PFAM: 2-nitropropane dioxygenase NPD; KEGG: dth:DICTH_0278 oxidoreductase, 2-nitropropane dioxygenase family YP_004092478.1 KEGG: acl:ACL_0445 membrane-anchored DNA-binding protein, putative; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004092479.1 PFAM: metallophosphoesterase; KEGG: bcu:BCAH820_0911 purple acid phosphatase/fibronectin domain protein YP_004092480.1 PFAM: YibE/F family protein; KEGG: pjd:Pjdr2_0311 YibE/F family protein YP_004092481.1 KEGG: cth:Cthe_1955 RNA binding S1; PFAM: Tex-like protein-like; RNA binding S1 domain protein; SMART: Resolvase RNase H domain protein fold YP_004092482.1 PFAM: Auxin Efflux Carrier; KEGG: lga:LGAS_0478 malate permease related permease YP_004092483.1 KEGG: bbe:BBR47_45330 transcriptional regulator; manually curated; PFAM: LysR substrate-binding; regulatory protein LysR YP_004092484.1 PFAM: iron-containing alcohol dehydrogenase; KEGG: cth:Cthe_2579 iron-containing alcohol dehydrogenase YP_004092485.1 TIGRFAM: amidohydrolase; KEGG: oan:Oant_2455 amidohydrolase; PFAM: peptidase M20; peptidase dimerisation domain protein YP_004092486.1 KEGG: cac:CA_C0379 GntR family transcriptional regulator; PFAM: GntR domain protein; regulatory protein GntR HTH; SMART: regulatory protein GntR HTH YP_004092487.1 PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; KEGG: amt:Amet_0540 pyridoxal-5'-phosphate-dependent protein, beta subunit YP_004092488.1 manually curated; PFAM: ABC transporter related; KEGG: cno:NT01CX_0934 ABC transporter; SMART: AAA ATPase YP_004092489.1 KEGG: cbf:CLI_2083 His/Glu/Gln/Arg/opine ABC transporter permease; TIGRFAM: polar amino acid ABC transporter, inner membrane subunit; PFAM: binding-protein-dependent transport systems inner membrane component YP_004092490.1 KEGG: cbl:CLK_1471 polar amino acid ABC transporter amino acid-binding protein; PFAM: extracellular solute-binding protein family 3; SMART: extracellular solute-binding protein family 3 YP_004092491.1 KEGG: shi:Shel_05350 PLP-dependent enzyme, histidinol-phosphate/aromatic aminotransferase or cobyric acid decarboxylase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004092492.1 PFAM: purine catabolism PurC domain protein; KEGG: aoe:Clos_0854 PucR family transcriptional regulator YP_004092493.1 PFAM: amidinotransferase; KEGG: ckr:CKR_1931 hypothetical protein YP_004092494.1 PFAM: peptidase M20; KEGG: ckr:CKR_0659 hypothetical protein YP_004092495.1 KEGG: cac:CA_C0368 4-aminobutyrate aminotransferase; PFAM: aminotransferase class-III YP_004092496.1 PFAM: D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding; D-isomer specific 2-hydroxyacid dehydrogenase catalytic region; KEGG: ele:Elen_2705 D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding YP_004092497.1 KEGG: cno:NT01CX_2426 hypothetical protein YP_004092498.1 PFAM: FMN-binding domain protein; KEGG: cbe:Cbei_3767 FMN-binding domain-containing protein YP_004092499.1 PFAM: Ferric reductase domain protein transmembrane component domain; KEGG: ckr:CKR_1421 hypothetical protein YP_004092500.1 PFAM: ApbE family lipoprotein; KEGG: cth:Cthe_0561 ApbE-like lipoprotein YP_004092501.1 PFAM: regulatory protein TetR; KEGG: cac:CA_C2768 AcrR family transcriptional regulator YP_004092502.1 KEGG: ani:AN1960.2 hypothetical protein YP_004092503.1 KEGG: cth:Cthe_1399 C_GCAxxG_C_C family protein; TIGRFAM: C_GCAxxG_C_C family protein; PFAM: C_GCAxxG_C_C family protein; Dinitrogenase iron-molybdenum cofactor biosynthesis protein YP_004092504.1 TIGRFAM: modD protein; KEGG: clj:CLJU_c38070 nicotinate-nucleotide diphosphorylase; PFAM: Quinolinate phosphoribosyl transferase YP_004092505.1 PFAM: protein of unknown function DUF134; KEGG: drm:Dred_2217 hypothetical protein YP_004092506.1 PFAM: sodium/hydrogen exchanger; KEGG: clj:CLJU_c08970 putative Na(+)/H(+) antiporter YP_004092507.1 KEGG: amt:Amet_2166 small acid-soluble spore H family protein; TIGRFAM: small acid-soluble spore protein, H-type; PFAM: small acid-soluble spore H family protein YP_004092508.1 PFAM: peptidyl-prolyl cis-trans isomerase cyclophilin type; KEGG: cpy:Cphy_1255 peptidylprolyl isomerase YP_004092509.1 KEGG: spu:759024 hypothetical protein LOC759024 YP_004092510.1 PFAM: toxic anion resistance family protein; KEGG: gwc:GWCH70_1993 toxic anion resistance family protein YP_004092511.1 KEGG: cpy:Cphy_1970 hypothetical protein YP_004092512.1 KEGG: hmo:HM1_0009 hypothetical protein YP_004092513.1 KEGG: bll:BLJ_0060 von Willebrand factor A (vWA) domain-containing protein; PFAM: von Willebrand factor A; extracellular solute-binding protein family 1; SMART: von Willebrand factor A YP_004092514.1 PFAM: major facilitator superfamily MFS_1; KEGG: cbi:CLJ_B1941 major facilitator family protein YP_004092515.1 KEGG: dsy:DSY2141 hypothetical protein; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004092516.1 KEGG: cbe:Cbei_2374 CF-9 family membrane protein YP_004092517.1 PFAM: amine oxidase; KEGG: cpy:Cphy_1763 FAD dependent oxidoreductase YP_004092518.1 PFAM: oxidoreductase domain protein; KEGG: clj:CLJU_c26040 putative dehydrogenase YP_004092519.1 PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: cac:CA_C2631 hypothetical protein YP_004092520.1 KEGG: mta:Moth_0273 ribonuclease R; TIGRFAM: ribonuclease R; VacB and RNase II family 3'-5' exoribonuclease; PFAM: ribonuclease II; Ribonuclease B OB region domain; RNA binding S1 domain protein YP_004092521.1 KEGG: tte:TTE1758 preprotein translocase subunit SecG; TIGRFAM: preprotein translocase, SecG subunit; PFAM: Preprotein translocase SecG subunit YP_004092522.1 PFAM: DNA gyrase/topoisomerase IV subunit A; DNA gyrase repeat beta-propeller; KEGG: cce:Ccel_1399 DNA gyrase/topoisomerase IV subunit A; SMART: DNA gyrase/topoisomerase IV subunit A YP_004092523.1 PFAM: DNA gyrase subunit B domain protein; DNA topoisomerase type IIA subunit B region 2 domain protein; KEGG: cce:Ccel_1398 DNA gyrase subunit B domain protein; SMART: DNA topoisomerase II YP_004092524.1 SMART: AAA ATPase; TIGRFAM: ATP-dependent metalloprotease FtsH; KEGG: cth:Cthe_2253 ATP-dependent metalloprotease FtsH; PFAM: AAA ATPase central domain protein; peptidase M41 YP_004092525.1 PFAM: phosphoribosyltransferase; manually curated; KEGG: aac:Aaci_0199 hypoxanthine phosphoribosyltransferase; TIGRFAM: hypoxanthine phosphoribosyltransferase YP_004092526.1 KEGG: adg:Adeg_2060 tRNA(Ile)-lysidine synthetase; TIGRFAM: tRNA(Ile)-lysidine synthetase; PFAM: PP-loop domain protein; Protein of unkown function DUF1946 PP-loop ATpase YP_004092527.1 KEGG: cce:Ccel_0082 replicative DNA helicase; TIGRFAM: replicative DNA helicase; PFAM: DnaB domain protein helicase domain protein YP_004092528.1 KEGG: cth:Cthe_2257 50S ribosomal protein L9; TIGRFAM: ribosomal protein L9; PFAM: Ribosomal protein L9-like YP_004092529.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: cth:Cthe_2258 phosphoesterase, RecJ-like protein YP_004092530.1 PFAM: RNA-metabolising metallo-beta-lactamase; KEGG: tte:TTE1253 metallo-beta-lactamase superfamily hydrolase YP_004092531.1 KEGG: nve:NEMVE_v1g242277 hypothetical protein YP_004092532.1 PFAM: Nucleotidyl transferase; transferase hexapeptide repeat containing protein; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; KEGG: dau:Daud_1040 nucleotidyl transferase YP_004092533.1 PFAM: zinc/iron permease; KEGG: dhd:Dhaf_2670 zinc transporter ZupT YP_004092534.1 KEGG: drm:Dred_2456 ribonuclease H; PFAM: ribonuclease H YP_004092535.1 TIGRFAM: cysteine desulfurase NifS; KEGG: mpl:Mpal_1837 cysteine desulfurase NifS; PFAM: aminotransferase class V YP_004092536.1 PFAM: protein of unknown function UPF0047; KEGG: gka:GK1834 hypothetical protein YP_004092537.1 KEGG: cbt:CLH_1644 iron hydrogenase 1; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit YP_004092538.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; KEGG: cbt:CLH_1645 putative glutamate synthase (NADPH) small subunit YP_004092539.1 PFAM: regulatory protein TetR; KEGG: cac:CA_C0019 AcrR family transcriptional regulator YP_004092540.1 KEGG: cac:CA_C0020 MDR-type permease; TIGRFAM: drug resistance transporter, EmrB/QacA subfamily; PFAM: major facilitator superfamily MFS_1 YP_004092541.1 PFAM: YibE/F family protein; KEGG: cpy:Cphy_1156 YibE/F family protein YP_004092542.1 PFAM: 5'-Nucleotidase domain-containing protein; metallophosphoesterase; KEGG: bcl:ABC0966 nucleotidase YP_004092543.1 PFAM: Aldose 1-epimerase; KEGG: ssb:SSUBM407_0519 protein LacX 2 YP_004092544.1 PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: cbf:CLI_1428 nitrate reductase, NADH oxidase subunit YP_004092545.1 KEGG: clj:CLJU_c09100 anaerobic-type carbon monoxide dehydrogenase electron transfer subunit YP_004092546.1 KEGG: net:Neut_0163 PilT domain-containing protein YP_004092547.1 KEGG: ava:Ava_3266 hypothetical protein YP_004092548.1 KEGG: noc:Noc_0060 ATP-binding region, ATPase-like YP_004092549.1 KEGG: lsl:LSL_1862 hypothetical protein YP_004092550.1 PFAM: transport system permease protein; KEGG: ckr:CKR_1584 hypothetical protein YP_004092551.1 PFAM: periplasmic binding protein; KEGG: aoe:Clos_0220 periplasmic binding protein YP_004092552.1 TIGRFAM: nitrogenase iron protein; KEGG: mac:MA1213 nitrogenase reductase; PFAM: NifH/frxC-family protein YP_004092553.1 PFAM: nitrogen regulatory protein P-II; KEGG: mba:Mbar_A2280 nitrogen regulatory protein P-II YP_004092554.1 PFAM: nitrogen regulatory protein P-II; KEGG: mba:Mbar_A2279 P-II family nitrogen regulatory protein YP_004092555.1 KEGG: ckr:CKR_1620 hypothetical protein; TIGRFAM: nitrogenase vanadium-iron protein, alpha chain; nitrogenase alpha chain; nitrogenase component I, alpha chain; PFAM: oxidoreductase/nitrogenase component 1 YP_004092556.1 PFAM: Vanadium/alternative nitrogenase delta subunit; KEGG: avn:Avin_02600 vanadium nitrogenase, delta subunit, VnfG YP_004092557.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: ava:Ava_4027 oxidoreductase/nitrogenase, component 1 YP_004092558.1 KEGG: gyc:GYMC61_0594 XRE family plasmid maintenance system antidote protein YP_004092559.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: ava:Ava_4028 oxidoreductase/nitrogenase, component 1 YP_004092560.1 PFAM: oxidoreductase/nitrogenase component 1; KEGG: ckr:CKR_1616 hypothetical protein YP_004092561.1 KEGG: cbe:Cbei_2005 nitrogenase cofactor biosynthesis protein NifB; TIGRFAM: nitrogenase cofactor biosynthesis protein NifB; PFAM: Dinitrogenase iron-molybdenum cofactor biosynthesis protein; Radical SAM domain protein YP_004092562.1 PFAM: pyruvate carboxyltransferase; KEGG: mba:Mbar_A2268 homocitrate synthase YP_004092563.1 KEGG: mac:MA1225 homocitrate synthase; PFAM: pyruvate carboxyltransferase YP_004092564.1 KEGG: mac:MA3372 hypothetical protein; TIGRFAM: Fe-only nitrogenase accessory protein AnfO; PFAM: Nitrogenase iron-iron accessory protein AnfO YP_004092565.1 KEGG: cac:CA_C3660 hypothetical protein YP_004092566.1 PFAM: periplasmic binding protein; KEGG: mba:Mbar_A2260 hypothetical protein YP_004092567.1 KEGG: cgr:CAGL0B04851g hypothetical protein YP_004092568.1 PFAM: nucleic acid binding OB-fold tRNA/helicase-type; PHP domain protein; KEGG: pjd:Pjdr2_1611 Ig domain protein YP_004092569.1 PFAM: YibE/F family protein; KEGG: cac:CA_C0206 hypothetical protein YP_004092570.1 KEGG: aoe:Clos_2473 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; PAS domain containing protein YP_004092571.1 PFAM: Extracellular ligand-binding receptor; KEGG: vei:Veis_4910 extracellular ligand-binding receptor YP_004092572.1 KEGG: aoe:Clos_2472 two component AraC family transcriptional regulator; PFAM: response regulator receiver; helix-turn-helix- domain containing protein AraC type; SMART: response regulator receiver; Helix-turn-helix, AraC domain YP_004092573.1 PFAM: Nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; KEGG: mrd:Mrad2831_4421 nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase YP_004092574.1 KEGG: clj:CLJU_c20450 biotin carboxylase YP_004092575.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtE; PFAM: ABC transporter related; KEGG: amr:AM1_5988 branched chain amino acid ABC transporter, ATP-binding protein, putative; SMART: AAA ATPase YP_004092576.1 TIGRFAM: urea ABC transporter, ATP-binding protein UrtD; PFAM: ABC transporter related; KEGG: ent:Ent638_1991 ABC transporter related; SMART: AAA ATPase YP_004092577.1 PFAM: inner-membrane translocator; KEGG: cth:Cthe_1821 inner-membrane translocator YP_004092578.1 PFAM: inner-membrane translocator; KEGG: amr:AM1_5991 branched-chain amino acid ABC transporter, permease protein YP_004092579.1 KEGG: amr:AM1_5992 ABC transporter, periplasmic solute-binding protein, putative YP_004092580.1 KEGG: dsy:DSY3417 hypothetical protein YP_004092581.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004092582.1 KEGG: cpy:Cphy_3499 polysaccharide biosynthesis protein; manually curated; PFAM: polysaccharide biosynthesis protein YP_004092583.1 PFAM: glycosyl transferase family 2; KEGG: bcr:BCAH187_A5438 N-acetylglucosaminyltransferase YP_004092584.1 KEGG: ljf:FI9785_1173 oligosaccharide repeat unit polymerase YP_004092585.1 PFAM: glycosyl transferase family 2; KEGG: npu:Npun_R1489 glycosyl transferase family protein YP_004092586.1 PFAM: glycosyl transferase group 1; KEGG: btb:BMB171_C4868 UDP-N-acetyl-D-mannosamine 6-dehydrogenase YP_004092587.1 PFAM: glycosyl transferase family 2; KEGG: fps:FP1289 rhamnosyl transferase YP_004092588.1 KEGG: pjd:Pjdr2_0406 transferase hexapeptide repeat containing protein YP_004092589.1 PFAM: glycosyl transferase group 1; KEGG: pjd:Pjdr2_0405 glycosyl transferase group 1 YP_004092590.1 KEGG: spe:Spro_0558 acyltransferase 3 YP_004092591.1 KEGG: pdi:BDI_2201 mannose-6-phosphate isomerase; PFAM: Nucleotidyl transferase; Cupin 2 conserved barrel domain protein YP_004092592.1 PFAM: NAD-dependent epimerase/dehydratase; KEGG: pdi:BDI_2202 GDP-4-keto-6-deoxy-D-mannose-3,5-epimerase YP_004092593.1 KEGG: pjd:Pjdr2_0413 hypothetical protein YP_004092594.1 KEGG: pdi:BDI_2203 GDP-mannose 4,6-dehydratase; TIGRFAM: GDP-mannose 4,6-dehydratase; PFAM: NAD-dependent epimerase/dehydratase YP_004092595.1 KEGG: efa:EF0432 AraC family transcriptional regulator; PFAM: helix-turn-helix- domain containing protein AraC type; SMART: Helix-turn-helix, AraC domain YP_004092596.1 KEGG: cno:NT01CX_0628 glycine betaine/carnitine/choline ABC transporter; manually curated; PFAM: binding-protein-dependent transport systems inner membrane component YP_004092597.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: slp:Slip_0635 binding-protein-dependent transport systems inner membrane component YP_004092598.1 TIGRFAM: glycine betaine/L-proline ABC transporter, ATPase subunit; PFAM: ABC transporter related; CBS domain containing protein; KEGG: slp:Slip_0636 glycine betaine/L-proline ABC transporter, ATPase subunit; SMART: AAA ATPase; CBS domain containing protein YP_004092599.1 PFAM: Domain of unknown function DUF1869; KEGG: rso:RS05070 putative hemagglutinin/hemolysin-related protein YP_004092600.1 KEGG: pmy:Pmen_0515 16S ribosomal RNA methyltransferase RsmE YP_004092601.1 KEGG: cbt:CLH_2973 transcriptional regulator, LuxR family protein; PFAM: regulatory protein LuxR; SMART: regulatory protein LuxR YP_004092602.1 KEGG: ngr:NAEGRDRAFT_75750 hypothetical protein YP_004092603.1 PFAM: manganese containing catalase; KEGG: eel:EUBELI_00515 spore coat protein JC YP_004092604.1 KEGG: cth:Cthe_0415 spore coat protein CotJB YP_004092605.1 KEGG: tex:Teth514_1215 hypothetical protein YP_004092606.1 KEGG: dtu:Dtur_1293 protein of unknown function DUF955 YP_004092607.1 KEGG: lmh:LMHCC_1409 GP37; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein YP_004092608.1 KEGG: sjp:SJA_C1-08630 hypothetical protein YP_004092609.1 PFAM: Mor transcription activator domain protein; KEGG: cdl:CDR20291_0545 putative phage-related regulatory protein YP_004092610.1 TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: ate:Athe_1508 ATP-dependent chaperone ClpB; SMART: AAA ATPase YP_004092611.1 PFAM: glycoside hydrolase family 68; KEGG: bld:BLi03706 SacB YP_004092612.1 KEGG: ckr:CKR_0338 hypothetical protein; PFAM: LytTr DNA-binding region; response regulator receiver; SMART: response regulator receiver YP_004092613.1 KEGG: cbl:CLK_3605 undecaprenyl pyrophosphate phosphatase; TIGRFAM: undecaprenol kinase; PFAM: Bacitracin resistance protein BacA YP_004092614.1 TIGRFAM: quinolinate synthetase complex, A subunit; KEGG: cth:Cthe_2356 quinolinate synthetase A; PFAM: Quinolinate synthetase A YP_004092615.1 TIGRFAM: tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; KEGG: bts:Btus_1096 tRNA(5-methylaminomethyl-2-thiouridylate)-methyl transferase YP_004092616.1 PFAM: Radical SAM domain protein; KEGG: nth:Nther_0555 radical SAM domain protein YP_004092617.1 KEGG: isc:IscW_ISCW019853 hypothetical protein YP_004092618.1 KEGG: aac:Aaci_0236 hypothetical protein YP_004092619.1 KEGG: cgr:CAGL0G04125g hypothetical protein YP_004092620.1 KEGG: dac:Daci_0665 malate synthase G YP_004092621.1 PFAM: small acid-soluble spore protein alpha/beta type; KEGG: ckr:CKR_1432 hypothetical protein YP_004092622.1 PFAM: protein of unknown function DUF955; KEGG: dtu:Dtur_1293 protein of unknown function DUF955 YP_004092623.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: lin:lin2607 hypothetical protein; SMART: helix-turn-helix domain protein YP_004092624.1 PFAM: Mor transcription activator domain protein; KEGG: amt:Amet_4373 hypothetical protein YP_004092625.1 KEGG: mac:MA3430 cell surface protein; PFAM: peptidase C1A papain; SMART: peptidase C1A papain YP_004092626.1 KEGG: lgs:LEGAS_1057 putative hydrolase YP_004092627.1 PFAM: extracellular solute-binding protein family 1; KEGG: cbl:CLK_0996 carbohydrate ABC transporter periplasmic-binding protein YP_004092628.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: lrl:LC705_01008 sugar ABC transporterpermease YP_004092629.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: cbb:CLD_3038 carbohydrate ABC transporter permease YP_004092630.1 KEGG: cby:CLM_1750 carbohydrate uptake ABC transporter, CUT1 family, ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092631.1 KEGG: bha:BH3496 transcriptional regulator of multidrug-efflux transporter genes; PFAM: regulatory protein MerR; SMART: regulatory protein MerR YP_004092632.1 KEGG: dak:DaAHT2_2456 nitrogen regulatory protein P-II; manually curated; PFAM: nitrogen regulatory protein P-II YP_004092633.1 PFAM: nitrogen regulatory protein P-II; KEGG: amt:Amet_3522 nitrogen regulatory protein P-II YP_004092634.1 TIGRFAM: aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein; KEGG: tjr:TherJR_0600 aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein YP_004092635.1 PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: tjr:TherJR_0601 binding-protein-dependent transport systems inner membrane component YP_004092636.1 KEGG: tjr:TherJR_0602 ABC transporter related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092637.1 KEGG: pjd:Pjdr2_2803 UreA carboxylase-associated protein 2; TIGRFAM: urea carboxylase-associated protein 2; PFAM: Domain of unknown function DUF1989 YP_004092638.1 KEGG: pjd:Pjdr2_2804 UreA carboxylase-associated protein 1; TIGRFAM: urea carboxylase-associated protein 1; PFAM: Domain of unknown function DUF1989 YP_004092639.1 TIGRFAM: urea carboxylase; urea amidolyase related protein; PFAM: Allophanate hydrolase subunit 2; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; Allophanate hydrolase subunit 1; biotin/lipoyl attachment domain-containing protein; KEGG: pjd:Pjdr2_2805 UreA carboxylase; SMART: Allophanate hydrolase subunit 2; Allophanate hydrolase subunit 1 YP_004092640.1 PFAM: Amidase; KEGG: pjd:Pjdr2_2806 allophanate hydrolase YP_004092641.1 KEGG: ebi:EbC_28970 hypothetical protein YP_004092642.1 PFAM: glycosyl transferase family 2; KEGG: cyc:PCC7424_2557 glycosyl transferase family 2 YP_004092643.1 PFAM: glycosyl transferase group 1; KEGG: mmq:MmarC5_1307 glycosyl transferase, group 1 YP_004092644.1 KEGG: hne:HNE_0799 hypothetical protein YP_004092645.1 KEGG: dsy:DSY3417 hypothetical protein YP_004092646.1 PFAM: IS66 Orf2 family protein; KEGG: dsy:DSY3416 hypothetical protein YP_004092647.1 KEGG: dsy:DSY3291 hypothetical protein YP_004092648.1 KEGG: slp:Slip_1975 integrase family protein YP_004092649.1 KEGG: ptm:GSPATT00002062001 hypothetical protein YP_004092650.1 manually curated; PFAM: helix-turn-helix domain protein; KEGG: dhd:Dhaf_1407 transcriptional regulator, XRE family; SMART: helix-turn-helix domain protein YP_004092651.1 KEGG: ppp:PHYPADRAFT_104201 hypothetical protein YP_004092653.1 KEGG: bwe:BcerKBAB4_3941 riboflavin biosynthesis protein RibD YP_004092654.1 KEGG: pfo:Pfl01_5304 CheA signal transduction histidine kinases (STHK) YP_004092655.1 KEGG: bcl:ABC1275 transition state regulatory protein; manually curated; TIGRFAM: transcriptional regulator, AbrB family YP_004092656.1 KEGG: bfo:BRAFLDRAFT_64474 hypothetical protein YP_004092657.1 KEGG: asa:ASA_P4G064 putative DNA helicase YP_004092658.1 KEGG: pth:PTH_2388 histone acetyltransferase HPA2 and related acetyltransferases YP_004092659.1 KEGG: caa:Caka_0102 hypothetical protein YP_004092660.1 KEGG: bja:bll6336 ABC transporter permease YP_004092661.1 KEGG: zma:100382727 hypothetical protein LOC100382727 YP_004092662.1 KEGG: sli:Slin_1964 putative helicase A859L YP_004092663.1 KEGG: bja:bll5309 putative methyl-accepting chemotaxis protein YP_004092665.1 KEGG: pyo:PY02554 hypothetical protein YP_004092666.1 KEGG: aac:Aaci_2929 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004092667.1 KEGG: dhd:Dhaf_2420 hypothetical protein YP_004092668.1 KEGG: pjd:Pjdr2_1597 phage protein YP_004092669.1 KEGG: bce:BC1875 phage protein YP_004092670.1 KEGG: hoh:Hoch_4591 cobyrinic acid ac-diamide synthase YP_004092671.1 KEGG: bhy:BHWA1_01079 stage 0 sporulation protein J; PFAM: ParB domain protein nuclease; SMART: ParB domain protein nuclease YP_004092672.1 PFAM: SpoVG family protein; KEGG: cbe:Cbei_0080 SpoVG family protein YP_004092673.1 KEGG: tva:TVAG_257470 TBC domain containing protein YP_004092674.1 KEGG: tkm:TK90_2186 prepilin peptidase; manually curated; PFAM: peptidase A24A prepilin type IV YP_004092675.1 KEGG: dsy:DSY0060 hypothetical protein YP_004092676.1 KEGG: ckr:CKR_3433 hypothetical protein YP_004092677.1 PFAM: type II secretion system protein E; KEGG: hmo:HM1_0587 type II/IV secretion system protein YP_004092678.1 KEGG: hmo:HM1_0588 hypothetical protein YP_004092679.1 KEGG: dae:Dtox_1489 hypothetical protein YP_004092680.1 KEGG: dae:Dtox_1483 hypothetical protein YP_004092681.1 KEGG: bfr:BF3491 two-component system sensor histidine kinase/response regulator hybrid YP_004092682.1 KEGG: dae:Dtox_1492 hypothetical protein YP_004092683.1 KEGG: lth:KLTH0G18172g KLTH0G18172p YP_004092684.1 KEGG: paa:Paes_2379 hypothetical protein YP_004092685.1 KEGG: ace:Acel_0424 glycoside hydrolase family protein YP_004092686.1 KEGG: dae:Dtox_1961 Ig domain protein group 2 domain protein; PFAM: Ig domain protein group 2 domain protein; SMART: Ig domain protein group 2 domain protein YP_004092687.1 KEGG: hmo:HM1_0594 hypothetical protein YP_004092688.1 KEGG: ppu:PP_1154 sensory box protein YP_004092689.1 KEGG: lpj:JDM1_1516 hypothetical protein YP_004092690.1 KEGG: lel:LELG_01288 hypothetical protein YP_004092691.1 KEGG: amd:AMED_7297 rhs family protein YP_004092692.1 PFAM: protein of unknown function DUF437; KEGG: hms:HMU12020 bacteriophage protein YP_004092693.1 KEGG: eel:EUBELI_20477 hypothetical protein YP_004092694.1 KEGG: dsy:DSY4633 hypothetical protein YP_004092695.1 PFAM: Conjugal transfer protein TrbC; KEGG: mxa:MXAN_2531 hypothetical protein YP_004092696.1 KEGG: cpe:PCP50 hypothetical protein YP_004092697.1 KEGG: tcr:509287.30 hypothetical protein YP_004092698.1 KEGG: tva:TVAG_380150 hypothetical protein YP_004092699.1 KEGG: cbk:CLL_0009 hypothetical protein YP_004092700.1 KEGG: bqu:BQ02630 phage related lysozyme YP_004092701.1 KEGG: sep:SE0216 succinyl-diaminopimelate desuccinylase YP_004092703.1 KEGG: lma:LmjF15.0810 hypothetical protein YP_004092704.1 KEGG: ptm:GSPATT00008239001 hypothetical protein YP_004092705.1 KEGG: mmu:640524 spectrin beta 5 YP_004092706.1 KEGG: nve:NEMVE_v1g133019 hypothetical protein YP_004092707.1 KEGG: efa:EF2316 hypothetical protein YP_004092708.1 KEGG: aas:Aasi_1217 hypothetical protein; PFAM: Sel1 domain protein repeat-containing protein; SMART: Sel1 domain protein repeat-containing protein YP_004092709.1 KEGG: cdl:CDR20291_1777 hypothetical protein YP_004092710.1 KEGG: dpe:Dper_GL26712 GL26712 gene product from transcript GL26712-RA; PFAM: Ankyrin; SMART: Ankyrin YP_004092711.1 PFAM: TRAG family protein; KEGG: lmn:LM5578_p50 hypothetical protein YP_004092712.1 KEGG: bts:Btus_2225 phosphatidylserine/phosphatidylglycerophosphate/cardiolipi nsynthase- like protein YP_004092713.1 KEGG: plt:Plut_0817 hypothetical protein YP_004092714.1 KEGG: tva:TVAG_247050 hypothetical protein YP_004092715.1 KEGG: soz:Spy49_1510c hypothetical protein YP_004092716.1 KEGG: tgu:100228004 similar to uveal autoantigen with coiled-coil domains and ankyrin repeats YP_004092717.1 TIGRFAM: S-adenosylmethionine synthetase; KEGG: hmo:HM1_2130 S-adenosylmethionine synthetase; PFAM: S-adenosylmethionine synthetase YP_004092718.1 KEGG: cgt:cgR_1655 guanylate kinase YP_004092719.1 KEGG: adg:Adeg_1547 anaerobic ribonucleoside-triphosphate reductase activating protein; TIGRFAM: anaerobic ribonucleoside-triphosphate reductase activating protein; PFAM: Radical SAM domain protein YP_004092720.1 TIGRFAM: anaerobic ribonucleoside-triphosphate reductase; KEGG: dhd:Dhaf_0351 anaerobic ribonucleoside triphosphate reductase; PFAM: ATP-cone domain protein YP_004092721.1 TIGRFAM: orotate phosphoribosyltransferase; KEGG: cbe:Cbei_1006 orotate phosphoribosyltransferase; PFAM: phosphoribosyltransferase YP_004092722.1 KEGG: pjd:Pjdr2_2720 ABC transporter related; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004092723.1 KEGG: bbe:BBR47_14870 ABC transporter ATP-binding/permease protein; PFAM: ABC transporter related; ABC transporter transmembrane region; SMART: AAA ATPase YP_004092724.1 KEGG: amt:Amet_3741 hypothetical protein YP_004092725.1 KEGG: cth:Cthe_1219 hypothetical protein YP_004092726.1 KEGG: cre:CHLREDRAFT_142700 hypothetical protein YP_004092727.1 PFAM: polysaccharide deacetylase; KEGG: cbb:CLD_1797 polysaccharide deacetylase family protein YP_004092728.1 TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: ccu:Ccur_07770 competence protein ComEA-like protein with helix-hairpin-helix repeat region YP_004092729.1 KEGG: clj:CLJU_c21040 DNA polymerase IV; PFAM: UMUC domain protein DNA-repair protein YP_004092730.1 PFAM: Abortive infection protein; KEGG: cef:CE0449 hypothetical protein YP_004092731.1 SMART: HhH-GPD family protein; TIGRFAM: endonuclease III; KEGG: cth:Cthe_1283 DNA-(apurinic or apyrimidinic site) lyase / endonuclease III; PFAM: HhH-GPD family protein; iron-sulfur cluster loop YP_004092732.1 PFAM: SpoVG family protein; KEGG: cbe:Cbei_0080 SpoVG family protein YP_004092733.1 KEGG: cth:Cthe_2626 UDP-N-acetylmuramate--L-alanine ligase; TIGRFAM: UDP-N-acetylmuramate/alanine ligase; PFAM: Mur ligase middle domain protein; cytoplasmic peptidoglycan synthetase domain protein YP_004092734.1 PFAM: UBA/THIF-type NAD/FAD binding protein; KEGG: cth:Cthe_3110 UBA/ThiF-type NAD/FAD binding fold YP_004092735.1 KEGG: pjd:Pjdr2_0249 hypothetical protein YP_004092736.1 PFAM: FAD dependent oxidoreductase; Rieske [2Fe-2S] iron-sulphur domain; KEGG: cth:Cthe_1461 FAD dependent oxidoreductase YP_004092737.1 KEGG: azo:azo0565 GGDEF/EAL/PAS/PAC/GAF-domain-containing protein; PFAM: EAL domain protein; SMART: EAL domain protein YP_004092738.1 KEGG: cce:Ccel_0055 ribosomal protein S6; TIGRFAM: ribosomal protein S6; PFAM: Ribosomal protein S6, bacterial-like YP_004092739.1 KEGG: mta:Moth_0129 single-strand binding protein; TIGRFAM: single-strand binding protein; PFAM: single-strand binding protein/Primosomal replication protein n YP_004092740.1 KEGG: cce:Ccel_0075 30S ribosomal protein S18; TIGRFAM: ribosomal protein S18; PFAM: ribosomal protein S18 YP_004092741.1 KEGG: cch:Cag_0738 VCBS YP_004092742.1 KEGG: pst:PSPTO_1073 hypothetical protein YP_004092743.1 TIGRFAM: TDP-4-keto-6-deoxy-D-glucose transaminase; KEGG: shi:Shel_14360 TDP-4-oxo-6-deoxy-D-glucose transaminase; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004092744.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cbk:CLL_A3238 hypothetical protein YP_004092745.1 PFAM: protein of unknown function DUF6 transmembrane; KEGG: cbk:CLL_A3239 hypothetical protein YP_004092746.1 PFAM: ATP-dependent carboxylate-amine ligase domain protein ATP-grasp; KEGG: cbk:CLL_A3240 putative carbamoyl-phosphate synthase large chain YP_004092747.1 PFAM: glycosyl transferase family 2; KEGG: shi:Shel_14340 glycosyl transferase YP_004092748.1 PFAM: lipolytic protein G-D-S-L family; KEGG: ckr:CKR_2441 hypothetical protein YP_004092749.1 TIGRFAM: peptidase T; KEGG: cpy:Cphy_3349 peptidase T; PFAM: peptidase dimerisation domain protein; peptidase M20 YP_004092750.1 PFAM: glycosyl transferase family 2; KEGG: cbe:Cbei_0073 glycosyl transferase family protein YP_004092751.1 KEGG: cce:Ccel_0246 two component transcriptional regulator, winged helix family; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver YP_004092752.1 KEGG: cce:Ccel_0247 histidine kinase; PFAM: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein; SMART: ATP-binding region ATPase domain protein; histidine kinase A domain protein; histidine kinase HAMP region domain protein YP_004092753.1 KEGG: clj:CLJU_c17060 hypothetical protein YP_004092754.1 TIGRFAM: ATP-dependent Clp protease, ATP-binding subunit ClpX; PFAM: ATPase AAA-2 domain protein; Clp ATPase-like; KEGG: cth:Cthe_2741 ATP-dependent protease ATP-binding subunit ClpX; SMART: AAA ATPase YP_004092755.1 TIGRFAM: ATP-dependent Clp protease, proteolytic subunit ClpP; KEGG: cth:Cthe_2740 ATP-dependent Clp protease proteolytic subunit; PFAM: peptidase S14 ClpP YP_004092756.1 KEGG: cth:Cthe_2739 trigger factor; TIGRFAM: trigger factor; PFAM: trigger factor domain-containing protein; peptidylprolyl isomerase FKBP-type YP_004092757.1 KEGG: adg:Adeg_0298 germination protein, Ger(X)C family YP_004092758.1 PFAM: Spore germination protein; KEGG: pjd:Pjdr2_5515 spore germination protein YP_004092759.1 PFAM: GerA spore germination protein; KEGG: csc:Csac_2777 GerA spore germination protein YP_004092760.1 KEGG: cpr:CPR_2465 glycyl-tRNA synthetase; TIGRFAM: glycyl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Anticodon-binding domain protein YP_004092761.1 PFAM: OmpA/MotB domain protein; KEGG: cce:Ccel_0263 OmpA/MotB domain protein YP_004092762.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: cce:Ccel_0264 MotA/TolQ/ExbB proton channel YP_004092763.1 KEGG: ptm:GSPATT00033253001 hypothetical protein YP_004092764.1 KEGG: cce:Ccel_0106 flagellar protein FliS; TIGRFAM: flagellar protein FliS; PFAM: flagellar protein FliS YP_004092765.1 PFAM: flagellar hook-associated 2 domain-containing protein; flagellar hook-associated protein 2 domain-containing protein; KEGG: ckr:CKR_1852 hypothetical protein YP_004092766.1 KEGG: clj:CLJU_c09550 putative flagellar protein YP_004092767.1 KEGG: dae:Dtox_0615 response regulator receiver modulated CheB methylesterase; PFAM: CheB methylesterase; response regulator receiver; SMART: response regulator receiver YP_004092768.1 PFAM: MCP methyltransferase CheR-type; KEGG: cth:Cthe_0808 MCP methyltransferase, CheR-type; SMART: MCP methyltransferase CheR-type YP_004092769.1 KEGG: cth:Cthe_0809 CheW protein; PFAM: CheW domain protein; SMART: CheW domain protein YP_004092770.1 KEGG: cth:Cthe_0810 CheA signal transduction histidine kinases; PFAM: ATP-binding region ATPase domain protein; Signal transducing histidine kinase homodimeric; Hpt domain protein; CheW domain protein; SMART: ATP-binding region ATPase domain protein; Hpt domain protein; CheW domain protein YP_004092771.1 PFAM: glycosyl transferase family 2; KEGG: dsy:DSY3021 hypothetical protein YP_004092772.1 PFAM: flagellin domain protein; KEGG: pjd:Pjdr2_5759 flagellin domain protein YP_004092773.1 KEGG: tjr:TherJR_2794 carbon storage regulator, CsrA; TIGRFAM: carbon storage regulator; PFAM: carbon storage regulator YP_004092774.1 PFAM: protein of unknown function DUF180; KEGG: csc:Csac_1670 flagellar assembly protein FliW YP_004092775.1 KEGG: bpu:BPUM_3188 hypothetical protein YP_004092776.1 KEGG: cac:CA_C2211 flagellin YP_004092777.1 KEGG: tmt:Tmath_0561 flagellar hook-associated protein FlgK; TIGRFAM: flagellar hook-associated protein FlgK; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004092778.1 PFAM: FlgN family protein; KEGG: cya:CYA_1424 hypothetical protein YP_004092779.1 KEGG: dae:Dtox_0674 anti-sigma-28 factor, FlgM; TIGRFAM: Anti-sigma-28 factor FlgM family protein; PFAM: Anti-sigma-28 factor FlgM family protein YP_004092780.1 KEGG: tmt:Tmath_0201 flagellar basal-body rod protein FlgG; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004092781.1 KEGG: dae:Dtox_0710 flagellar basal-body rod protein FlgF; TIGRFAM: flagellar hook-basal body protein; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004092782.1 KEGG: eel:EUBELI_00840 phosphatidylserine decarboxylase; TIGRFAM: RNA polymerase sigma factor, FliA/WhiG family; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_004092783.1 KEGG: tpd:Teth39_1237 flagellar biosynthesis protein FlhA; TIGRFAM: flagellar biosynthesis protein FlhA; PFAM: type III secretion FHIPEP protein YP_004092784.1 KEGG: cce:Ccel_2032 flagellar biosynthetic protein FlhB; TIGRFAM: flagellar biosynthetic protein FlhB; PFAM: type III secretion exporter YP_004092785.1 KEGG: tex:Teth514_1675 flagellar biosynthesis protein FliR; TIGRFAM: flagellar biosynthetic protein FliR; PFAM: type III secretion system inner membrane R protein YP_004092786.1 PFAM: export protein FliQ family 3; KEGG: bgl:bglu_1g00180 flagellar biosynthesis protein FliQ YP_004092787.1 KEGG: aoe:Clos_1497 flagellar biosynthetic protein FliP; TIGRFAM: flagellar biosynthetic protein FliP; PFAM: type III secretion system inner membrane P protein YP_004092788.1 TIGRFAM: flagellar biosynthetic protein FliO; KEGG: ate:Athe_2158 hypothetical protein YP_004092789.1 KEGG: bcl:ABC2256 two-component response regulator of modulation of flagellar; PFAM: response regulator receiver; SMART: response regulator receiver YP_004092790.1 KEGG: slp:Slip_0966 CheC, inhibitor of MCP methylation / FliN fusion protein; TIGRFAM: flagellar motor switch protein FliN; PFAM: surface presentation of antigens (SPOA) protein; CheC domain protein YP_004092791.1 KEGG: csc:Csac_1269 flagellar motor switch protein FliM; TIGRFAM: flagellar motor switch protein FliM; PFAM: flagellar motor switch protein FliM; surface presentation of antigens (SPOA) protein YP_004092792.1 PFAM: MotA/TolQ/ExbB proton channel; KEGG: pth:PTH_2119 flagellar motor component YP_004092793.1 PFAM: flagellar FlbD family protein; KEGG: bpo:BP951000_0763 putative flagellar family protein YP_004092794.1 KEGG: bbe:BBR47_34740 flagellar hook protein FlgE; TIGRFAM: flagellar hook-basal body protein; PFAM: protein of unknown function DUF1078 domain protein; flagellar basal body rod protein YP_004092795.1 TIGRFAM: flagellar operon protein; KEGG: tjr:TherJR_1534 flagellar operon protein YP_004092796.1 PFAM: flagellar hook capping protein; KEGG: cth:Cthe_0472 flagellar hook capping protein YP_004092797.1 PFAM: Flagellar hook-length control protein-like, C-terminal domain; KEGG: pgu:PGUG_01202 hypothetical protein YP_004092798.1 KEGG: tpd:Teth39_1253 flagellar export protein FliJ YP_004092799.1 TIGRFAM: ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; KEGG: amt:Amet_2722 flagellar protein export ATPase FliI; SMART: AAA ATPase YP_004092800.1 KEGG: mta:Moth_0773 flagellar assembly protein FliH YP_004092801.1 PFAM: flagellar motor switch protein FliG; KEGG: fno:Fnod_0833 flagellar motor switch protein G YP_004092802.1 KEGG: cce:Ccel_2050 flagellar motor switch protein G; TIGRFAM: flagellar motor switch protein FliG; PFAM: flagellar motor switch protein FliG YP_004092803.1 KEGG: tit:Thit_1236 flagellar M-ring protein FliF; TIGRFAM: flagellar M-ring protein FliF; PFAM: secretory protein YscJ/FliF family protein; Flagellar M-ring domain protein YP_004092804.1 PFAM: flagellar hook-basal body complex protein FliE; KEGG: amt:Amet_2726 flagellar hook-basal body complex subunit FliE YP_004092805.1 KEGG: slp:Slip_0951 flagellar basal-body rod protein FlgC; TIGRFAM: flagellar basal-body rod protein FlgC; PFAM: flagellar basal body rod protein; protein of unknown function DUF1078 domain protein YP_004092806.1 KEGG: bts:Btus_1491 flagellar basal-body rod protein FlgB; TIGRFAM: flagellar basal-body rod protein FlgB; PFAM: flagellar basal body rod protein YP_004092807.1 PFAM: LysR substrate-binding; regulatory protein LysR; KEGG: cbe:Cbei_0722 LysR family transcriptional regulator YP_004092808.1 PFAM: major facilitator superfamily MFS_1; KEGG: cbe:Cbei_0723 EmrB/QacA family drug resistance transporter YP_004092809.1 KEGG: pjd:Pjdr2_2740 germination protein, Ger(X)C family; TIGRFAM: germination protein, Ger(x)C family; PFAM: spore germination B3 GerAC family protein YP_004092810.1 PFAM: GerA spore germination protein; KEGG: dhd:Dhaf_3282 GerA spore germination protein YP_004092812.1 KEGG: cac:CA_P0022 spore germination protein, GrkB; TIGRFAM: spore germination protein; PFAM: Spore germination protein YP_004092813.1 KEGG: cno:NT01CX_0970 glycogen phosphorylase; TIGRFAM: glycogen/starch/alpha-glucan phosphorylase; PFAM: glycosyl transferase family 35 YP_004092814.1 TIGRFAM: 4-alpha-glucanotransferase; KEGG: eel:EUBELI_00367 glycoside hydrolase family 77 candidate 4-A-glucanotransferase; PFAM: glycoside hydrolase family 77 YP_004092815.1 KEGG: eat:EAT1b_2506 transcriptional regulator, LacI family; PFAM: periplasmic binding protein/LacI transcriptional regulator; regulatory protein LacI; SMART: regulatory protein LacI YP_004092816.1 KEGG: pjd:Pjdr2_2688 hypothetical protein YP_004092817.1 KEGG: dsy:DSY3851 hypothetical protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092818.1 PFAM: cobalt transport protein; KEGG: dsy:DSY3852 hypothetical protein YP_004092819.1 manually curated; KEGG: pjd:Pjdr2_2685 hypothetical protein YP_004092820.1 PFAM: Radical SAM domain protein; KEGG: cdf:CD0392 radical SAM-superfamily protein YP_004092821.1 KEGG: cno:NT01CX_0686 TatD family hydrolase; TIGRFAM: hydrolase, TatD family; PFAM: TatD-related deoxyribonuclease YP_004092822.1 KEGG: cth:Cthe_2096 methionyl-tRNA synthetase; TIGRFAM: methionyl-tRNA synthetase; methionyl-tRNA synthetase, beta subunit; PFAM: tRNA synthetase class I (M); t-RNA-binding domain-containing protein YP_004092823.1 PFAM: G5 domain protein; protein of unknown function DUF348; 3D domain-containing protein; KEGG: slp:Slip_0056 3D domain protein YP_004092824.1 PFAM: ribosomal protein S9; KEGG: gym:GYMC10_5716 ribosomal protein S9 YP_004092825.1 KEGG: tjr:TherJR_0331 ribosomal protein L13; TIGRFAM: ribosomal protein L13; PFAM: ribosomal protein L13 YP_004092826.1 KEGG: bcy:Bcer98_1499 cell envelope-related transcriptional attenuator YP_004092827.1 KEGG: cbe:Cbei_2087 integral membrane sensor signal transduction histidine kinase; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein YP_004092828.1 TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; KEGG: cth:Cthe_0137 glyceraldehyde-3-phosphate dehydrogenase; PFAM: Glyceraldehyde 3-phosphate dehydrogenase, NAD(P) binding domain; Glyceraldehyde 3-phosphate dehydrogenase, catalytic domain YP_004092829.1 KEGG: pmt:PMT1802 putative p-pantothenate cysteine ligase and p-pantothenenoylcysteine decarboxylase YP_004092830.1 KEGG: aoe:Clos_0782 ECF subfamily RNA polymerase sigma-24 factor; TIGRFAM: RNA polymerase sigma factor, sigma-70 family; PFAM: Sigma-70 region 4 type 2; sigma-70 region 2 domain protein YP_004092831.1 PFAM: protein of unknown function DUF975; KEGG: cbb:CLD_2895 hypothetical protein YP_004092832.1 KEGG: afn:Acfer_1341 2-isopropylmalate synthase; TIGRFAM: 2-isopropylmalate synthase; PFAM: pyruvate carboxyltransferase; LeuA allosteric (dimerisation) domain-containing protein YP_004092833.1 KEGG: dae:Dtox_3292 hypothetical protein YP_004092834.1 TIGRFAM: alanine racemase; KEGG: dds:Ddes_0171 alanine racemase; PFAM: alanine racemase domain protein YP_004092835.1 PFAM: PpiC-type peptidyl-prolyl cis-trans isomerase; KEGG: cce:Ccel_0751 PpiC-type peptidyl-prolyl cis-trans isomerase YP_004092836.1 PFAM: protein of unknown function DUF558; KEGG: cth:Cthe_1319 hypothetical protein YP_004092837.1 KEGG: amt:Amet_3046 ribosomal protein L11 methyltransferase; TIGRFAM: ribosomal protein L11 methyltransferase; PFAM: ribosomal L11 methyltransferase YP_004092838.1 KEGG: cce:Ccel_2303 hydrogenase, Fe-only; TIGRFAM: hydrogenase, Fe-only; PFAM: hydrogenase large subunit domain protein; NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; iron hydrogenase small subunit YP_004092839.1 KEGG: cce:Ccel_2304 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding YP_004092840.1 PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; KEGG: cce:Ccel_2305 NADH dehydrogenase (ubiquinone) 24 kDa subunit YP_004092841.1 KEGG: ckr:CKR_1149 hypothetical protein YP_004092842.1 KEGG: cpy:Cphy_3237 hypothetical protein YP_004092843.1 KEGG: cth:Cthe_3186 radical SAM family protein; PFAM: Radical SAM domain protein; cobalamin B12-binding domain protein; SMART: Elongator protein 3/MiaB/NifB YP_004092844.1 manually curated; PFAM: EAL domain protein; KEGG: ppg:PputGB1_1310 diguanylate phosphodiesterase; SMART: EAL domain protein YP_004092845.1 PFAM: ApbE family lipoprotein; KEGG: cbl:CLK_3565 ApbE family protein YP_004092846.1 TIGRFAM: 2-dehydropantoate 2-reductase; KEGG: mru:mru_1320 2-dehydropantoate 2-reductase PanE; PFAM: Ketopantoate reductase ApbA/PanE domain protein YP_004092847.1 KEGG: bmc:BAbS19_I19600 BvrS, sensor histidine kinase YP_004092848.1 TIGRFAM: FeS assembly ATPase SufC; PFAM: ABC transporter related; KEGG: cac:CA_C3288 iron-regulated ABC transporter ATPase; SMART: AAA ATPase YP_004092849.1 KEGG: cac:CA_C3289 iron-regulated ABC-type transporter membrane component (SufB); TIGRFAM: FeS assembly protein SufB; PFAM: SufBD protein YP_004092850.1 KEGG: cac:CA_C3290 iron-regulated ABC-type transporter membrane component (SufB); TIGRFAM: FeS assembly protein SufD; PFAM: SufBD protein YP_004092851.1 KEGG: cac:CA_C3291 selenocysteine lyase; TIGRFAM: cysteine desulfurase, SufS subfamily; PFAM: aminotransferase class V YP_004092852.1 KEGG: cac:CA_C3292 NifU homolog involved in Fe-S cluster formation; TIGRFAM: SUF system FeS assembly protein, NifU family; PFAM: nitrogen-fixing NifU domain protein YP_004092853.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: ere:EUBREC_2908 hypothetical protein YP_004092854.1 PFAM: major facilitator superfamily MFS_1; KEGG: bwe:BcerKBAB4_1716 major facilitator transporter YP_004092855.1 PFAM: type IV pilus assembly PilZ; KEGG: cbt:CLH_2423 type IV pilus assembly protein PilZ YP_004092856.1 KEGG: tte:TTE0574 3-methyladenine DNA glycosylase; PFAM: 8-oxoguanine DNA glycosylase domain-containing protein; HhH-GPD family protein; SMART: HhH-GPD family protein YP_004092857.1 TIGRFAM: DNA polymerase I; PFAM: DNA-directed DNA polymerase; 5'-3' exonuclease, N-terminal resolvase-like domain; 5'-3' exonuclease, SAM-fold domain; KEGG: cce:Ccel_2075 DNA polymerase I; SMART: DNA-directed DNA polymerase; 5'-3' exonuclease; Helix-hairpin-helix domain protein class 2 YP_004092858.1 KEGG: dau:Daud_2149 protein tyrosine phosphatase; PFAM: Protein-tyrosine phosphatase, low molecular weight; SMART: Protein-tyrosine phosphatase, low molecular weight YP_004092859.1 KEGG: csc:Csac_0216 ribosomal-protein-alanine acetyltransferase; TIGRFAM: ribosomal-protein-alanine acetyltransferase; PFAM: GCN5-related N-acetyltransferase YP_004092860.1 KEGG: mac:MA2009 beta-lactamase YP_004092861.1 TIGRFAM: metalloendopeptidase, glycoprotease family; KEGG: eel:EUBELI_00380 O-sialoglycoprotein endopeptidase; PFAM: peptidase M22 glycoprotease YP_004092862.1 KEGG: spe:Spro_4609 fimbrial assembly family protein YP_004092863.1 KEGG: pzu:PHZ_c2949 lysophospholipase L2 YP_004092864.1 TIGRFAM: spore protease; KEGG: tte:TTE0946 germination protease; PFAM: peptidase M63 germination protease YP_004092865.1 KEGG: cce:Ccel_1979 ribosomal protein S20; TIGRFAM: ribosomal protein S20; PFAM: ribosomal protein S20 YP_004092866.1 KEGG: azl:AZL_a00060 hypothetical protein YP_004092867.1 KEGG: chy:CHY_1446 acyl carrier protein; TIGRFAM: acyl carrier protein; PFAM: phosphopantetheine-binding YP_004092868.1 TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, alpha subunit; KEGG: cac:CA_C3568 acetyl-CoA carboxylase carboxyltransferase subunit alpha; PFAM: Acetyl-CoA carboxylase, alpha subunit, conserved region YP_004092869.1 KEGG: cac:CA_C3569 acetyl-CoA carboxylase beta subunit; TIGRFAM: acetyl-CoA carboxylase, carboxyl transferase, beta subunit; PFAM: carboxyl transferase YP_004092870.1 KEGG: cac:CA_C3570 biotin carboxylase; TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein YP_004092871.1 PFAM: Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ; KEGG: sca:Sca_1602 (3R)-hydroxymyristoyl-ACP dehydratase YP_004092872.1 KEGG: psa:PST_3273 acetyl-CoA carboxylase biotin carboxyl carrier protein subunit; TIGRFAM: acetyl-CoA carboxylase, biotin carboxyl carrier protein; PFAM: biotin/lipoyl attachment domain-containing protein YP_004092873.1 KEGG: ate:Athe_1158 3-oxoacyl-(acyl-carrier-protein) synthase 2; TIGRFAM: 3-oxoacyl-[acyl-carrier-protein] synthase 2; PFAM: Beta-ketoacyl synthase YP_004092874.1 KEGG: tex:Teth514_1723 3-oxoacyl-(acyl-carrier-protein) reductase; TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) reductase; PFAM: short-chain dehydrogenase/reductase SDR YP_004092875.1 TIGRFAM: 3-oxoacyl-(acyl-carrier-protein) synthase III; KEGG: cbe:Cbei_1068 3-oxoacyl-(acyl-carrier-protein) synthase III; PFAM: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III domain-containing protein; 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III YP_004092876.1 KEGG: sgo:SGO_1694 malonyl CoA-acyl carrier protein transacylase; TIGRFAM: malonyl CoA-acyl carrier protein transacylase; PFAM: Acyl transferase YP_004092877.1 KEGG: mta:Moth_1558 shikimate dehydrogenase; TIGRFAM: shikimate 5-dehydrogenase; PFAM: Shikimate dehydrogenase substrate binding domain protein; Shikimate/quinate 5-dehydrogenase YP_004092878.1 KEGG: pmx:PERMA_1404 shikimate kinase; PFAM: shikimate kinase YP_004092880.1 TIGRFAM: phospho-2-dehydro-3-deoxyheptonate aldolase; KEGG: cno:NT01CX_0627 3-deoxy-7-phosphoheptulonate synthase; PFAM: DAHP synthetase I/KDSA YP_004092881.1 PFAM: Prephenate dehydrogenase; KEGG: shi:Shel_10140 prephenate dehydrogenase YP_004092882.1 TIGRFAM: 3-dehydroquinate synthase; KEGG: cpf:CPF_0688 3-dehydroquinate synthase; PFAM: 3-dehydroquinate synthase YP_004092883.1 TIGRFAM: 3-phosphoshikimate 1-carboxyvinyltransferase; KEGG: clj:CLJU_c29150 3-phosphoshikimate 1-carboxyvinyltransferase; PFAM: EPSP synthase (3-phosphoshikimate 1-carboxyvinyltransferase) YP_004092884.1 TIGRFAM: chorismate synthase; KEGG: cbt:CLH_2891 chorismate synthase; PFAM: chorismate synthase YP_004092885.1 TIGRFAM: chorismate mutase; KEGG: drm:Dred_0783 prephenate dehydratase; PFAM: prephenate dehydratase; Chorismate mutase, type II YP_004092886.1 TIGRFAM: enolase; KEGG: cth:Cthe_0143 phosphopyruvate hydratase; PFAM: Enolase-like YP_004092887.1 PFAM: lipopolysaccharide biosynthesis protein; KEGG: bha:BH3669 capsular polysaccharide biosynthesis YP_004092888.1 KEGG: cpe:CPE0492 capsular polysaccharide biosynthsis protein; TIGRFAM: capsular exopolysaccharide family YP_004092889.1 KEGG: afr:AFE_1370 undecaprenyl-phosphate galactosephosphotransferase, putative; PFAM: sugar transferase YP_004092890.1 KEGG: bcy:Bcer98_2013 ABC transporter-related protein; PFAM: ABC transporter related; SMART: AAA ATPase YP_004092891.1 PFAM: Urease accessory protein UreD; KEGG: cth:Cthe_1812 urease accessory protein UreD YP_004092892.1 KEGG: cth:Cthe_1813 urease accessory protein UreG; TIGRFAM: urease accessory protein UreG; PFAM: cobalamin synthesis protein P47K YP_004092893.1 PFAM: Urease accessory protein UreF; KEGG: tjr:TherJR_0609 urease accessory protein UreF YP_004092894.1 TIGRFAM: urease, alpha subunit; KEGG: bln:Blon_0111 urease subunit alpha; PFAM: amidohydrolase; Urease alpha-subunit domain-containing protein YP_004092895.1 TIGRFAM: urease, beta subunit; KEGG: mpo:Mpop_1135 bifunctional urease subunit gamma/beta; PFAM: Urease beta subunit YP_004092896.1 TIGRFAM: urease, gamma subunit; KEGG: cth:Cthe_1818 urease, gamma subunit; PFAM: Urease gamma subunit region YP_004092897.1 KEGG: cce:Ccel_1111 glycoside hydrolase family 18; PFAM: glycoside hydrolase family 18; Peptidoglycan-binding lysin domain; SMART: chitinase II; Peptidoglycan-binding LysM YP_004092899.1 KEGG: tau:Tola_0290 sugar-phosphate isomerase, RpiB/LacA/LacB family; TIGRFAM: ribose 5-phosphate isomerase B; sugar-phosphate isomerase, RpiB/LacA/LacB family; PFAM: Ribose/galactose isomerase YP_004092900.1 KEGG: cth:Cthe_1385 preprotein translocase subunit SecA; TIGRFAM: preprotein translocase, SecA subunit; PFAM: SecA DEAD domain protein; SecA preprotein cross-linking region; SecA Wing and Scaffold; SEC-C motif domain protein YP_004092901.1 TIGRFAM: Polyphosphate kinase; KEGG: msi:Msm_1424 polyphosphate kinase; PFAM: Polyphosphate kinase YP_004092902.1 PFAM: Ppx/GppA phosphatase; KEGG: mla:Mlab_0394 hypothetical protein YP_004092903.1 PFAM: protein of unknown function DUF421; KEGG: tte:TTE0476 hypothetical protein YP_004092904.1 KEGG: swo:Swol_0320 hypothetical protein YP_004092905.1 PFAM: ATP-cone domain protein; KEGG: cth:Cthe_0450 transcriptional regulator NrdR YP_004092906.1 KEGG: cce:Ccel_0539 hypothetical protein YP_004092907.1 PFAM: Xylose isomerase domain-containing protein TIM barrel; KEGG: cbb:CLD_1298 AP endonuclease YP_004092908.1 KEGG: sgr:SGR_1496 putative ABC transporter permease protein YP_004092909.1 KEGG: cpy:Cphy_0716 SecD/SecF family protein-export membrane protein; TIGRFAM: protein-export membrane protein SecF; PFAM: SecD/SecF/SecDF export membrane protein YP_004092910.1 KEGG: cpy:Cphy_0716 SecD/SecF family protein-export membrane protein; TIGRFAM: protein-export membrane protein, SecD/SecF family; PFAM: SecD/SecF/SecDF export membrane protein YP_004092911.1 KEGG: cpy:Cphy_3043 adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; PFAM: Adenylosuccinate lyase-like; fumarate lyase YP_004092912.1 KEGG: swo:Swol_0703 pyridoxal phosphate-dependent enzyme; PFAM: DegT/DnrJ/EryC1/StrS aminotransferase YP_004092913.1 KEGG: lmo:lmo0558 hypothetical protein YP_004092914.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cbe:Cbei_2368 GCN5-related N-acetyltransferase YP_004092915.1 KEGG: cth:Cthe_0328 peptide chain release factor 3; TIGRFAM: peptide chain release factor 3; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; elongation factor Tu domain 2 protein YP_004092916.1 KEGG: hor:Hore_01850 histidinol-phosphate aminotransferase; TIGRFAM: histidinol-phosphate aminotransferase; PFAM: aminotransferase class I and II YP_004092917.1 PFAM: LrgB family protein; KEGG: cbe:Cbei_0937 LrgB family protein YP_004092918.1 PFAM: LrgA family protein; KEGG: ctc:CTC01825 putative murein hydrolase exporter YP_004092919.1 PFAM: hydrogenase large subunit domain protein; KEGG: emi:Emin_0750 hydrogenase large subunit YP_004092920.1 PFAM: Protein of unknown function DUF2127; KEGG: clj:CLJU_c26880 hypothetical protein YP_004092921.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: dsy:DSY2157 hypothetical protein YP_004092922.1 PFAM: thioesterase superfamily protein; KEGG: cth:Cthe_2687 thioesterase superfamily protein YP_004092923.1 KEGG: hmo:HM1_1037 glutamate synthase [nadph] large chain; PFAM: ferredoxin-dependent glutamate synthase; glutamine amidotransferase class-II; glutamate synthase; glutamate synthase alpha subunit domain protein YP_004092924.1 KEGG: amr:AM1_6355 glutamate synthase [NADPH] small chain; TIGRFAM: glutamate synthase, NADH/NADPH, small subunit; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase YP_004092925.1 KEGG: ant:Arnit_2458 hypothetical protein YP_004092926.1 KEGG: cjd:JJD26997_1188 hypothetical protein YP_004092927.1 KEGG: tmt:Tmath_2065 desulfoferrodoxin; TIGRFAM: desulfoferrodoxin; PFAM: Desulfoferrodoxin ferrous iron-binding region; Desulfoferrodoxin Dfx domain protein YP_004092928.1 PFAM: natural resistance-associated macrophage protein; KEGG: tmt:Tmath_0735 natural resistance-associated macrophage protein YP_004092929.1 KEGG: clo:HMPREF0868_0218 L-lactate dehydrogenase; TIGRFAM: L-lactate dehydrogenase; PFAM: Lactate/malate dehydrogenase YP_004092930.1 PFAM: NADH:flavin oxidoreductase/NADH oxidase; KEGG: cac:CA_C3229 NADPH dehydrogenase NamA YP_004092931.1 TIGRFAM: fructose-1,6-bisphosphate aldolase, class II; ketose-bisphosphate aldolase; KEGG: eel:EUBELI_01833 fructose-bisphosphate aldolase; PFAM: ketose-bisphosphate aldolase class-II YP_004092932.1 KEGG: cth:Cthe_0434 ATPase YP_004092933.1 KEGG: cpi:Cpin_3257 protein of unknown function DUF1200 YP_004092934.1 KEGG: tte:TTE0077 uracil-DNA glycosylase; TIGRFAM: phage SPO1 DNA polymerase-related protein; PFAM: Uracil-DNA glycosylase superfamily YP_004092935.1 KEGG: ere:EUBREC_1443 phosphate acetyltransferase; TIGRFAM: phosphate acetyltransferase; PFAM: phosphate acetyl/butaryl transferase YP_004092936.1 PFAM: Propanediol utilization protein; KEGG: tai:Taci_0076 propanediol utilization protein YP_004092937.1 PFAM: RNA binding S1 domain protein; KEGG: chl:Chy400_3085 RNA binding S1 domain protein YP_004092938.1 KEGG: azl:AZL_005450 hypothetical protein YP_004092939.1 KEGG: cpy:Cphy_3775 hypothetical protein; manually curated; PFAM: protein of unknown function DUF951 YP_004092940.1 KEGG: cth:Cthe_2593 peptide chain release factor 1; TIGRFAM: peptide chain release factor 1; PFAM: Class I peptide chain release factor; PCRF domain protein YP_004092941.1 KEGG: xce:Xcel_2287 SUA5/YciO/YrdC/YwlC family protein; TIGRFAM: Sua5/YciO/YrdC/YwlC family protein; PFAM: SUA5/yciO/yrdC domain; SUA5 domain-containing protein YP_004092942.1 TIGRFAM: dephospho-CoA kinase; KEGG: sti:Sthe_0726 dephospho-CoA kinase; PFAM: Dephospho-CoA kinase YP_004092943.1 PFAM: Lytic transglycosylase catalytic; KEGG: cth:Cthe_0884 lytic transglycosylase, catalytic YP_004092944.1 PFAM: peptidase M18 aminopeptidase I; KEGG: cce:Ccel_1926 putative aminopeptidase 1 YP_004092945.1 PFAM: protein of unknown function DUF125 transmembrane; KEGG: ele:Elen_0215 protein of unknown function DUF125 transmembrane YP_004092946.1 KEGG: cpy:Cphy_0823 hypothetical protein YP_004092947.1 TIGRFAM: diguanylate cyclase; PFAM: GGDEF domain containing protein; KEGG: ere:EUBREC_1551 diguanylate cyclase; SMART: GGDEF domain containing protein YP_004092948.1 KEGG: cdl:CDR20291_0364 hypothetical protein YP_004092949.1 KEGG: csc:Csac_0477 heavy metal translocating P-type ATPase; TIGRFAM: heavy metal translocating P-type ATPase; cadmium-translocating P-type ATPase; ATPase, P-type (transporting), HAD superfamily, subfamily IC; PFAM: E1-E2 ATPase-associated domain protein; Heavy metal transport/detoxification protein; Haloacid dehalogenase domain protein hydrolase YP_004092950.1 KEGG: tte:TTE2468 transcriptional regulator; PFAM: regulatory protein ArsR; SMART: regulatory protein ArsR YP_004092951.1 PFAM: transposase mutator type; KEGG: amt:Amet_1612 transposase, mutator type YP_004092952.1 KEGG: pjd:Pjdr2_0598 carbonate dehydratase YP_004092953.1 PFAM: GCN5-related N-acetyltransferase; KEGG: eel:EUBELI_01173 hypothetical protein YP_004092954.1 KEGG: cce:Ccel_1280 glutamate-1-semialdehyde-2,1-aminomutase; TIGRFAM: glutamate-1-semialdehyde-2,1-aminomutase; PFAM: aminotransferase class-III YP_004092955.1 PFAM: GCN5-related N-acetyltransferase; KEGG: cno:NT01CX_0012 acetyltransferase YP_004092956.1 KEGG: cpy:Cphy_3558 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein; TIGRFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; Pyruvate/ketoisovalerate oxidoreductase, catalytic domain; Pyruvate-flavodoxin oxidoreductase, EKR domain; thiamine pyrophosphate TPP-binding domain-containing protein YP_004092957.1 KEGG: cth:Cthe_2870 hypothetical protein; PFAM: protein of unknown function DUF21; CBS domain containing protein; transporter-associated region; SMART: CBS domain containing protein YP_004092958.1 TIGRFAM: exodeoxyribonuclease III Xth; exodeoxyribonuclease III; KEGG: nth:Nther_0949 exodeoxyribonuclease III; PFAM: Endonuclease/exonuclease/phosphatase YP_004092959.1 KEGG: clj:CLJU_c15840 putative exopolysaccharide biosynthesis protein YP_004092960.1 KEGG: clj:CLJU_c15850 hypothetical protein YP_004092961.1 PFAM: phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; KEGG: cth:Cthe_1265 alpha-phosphoglucomutase YP_004092962.1 KEGG: bxe:Bxe_B1520 signal transduction histidine kinase (STHK) with CheB and CheR activity YP_004092963.1 KEGG: pdi:BDI_0762 hypothetical protein YP_004092964.1 KEGG: bts:Btus_3094 PHP domain protein; PFAM: PHP domain protein; SMART: phosphoesterase PHP domain protein YP_004092965.1 PFAM: ABC-2 type transporter; KEGG: hau:Haur_2409 ABC-2 type transporter YP_004092966.1 TIGRFAM: daunorubicin resistance ABC transporter ATPase subunit; PFAM: ABC transporter related; KEGG: sna:Snas_0785 daunorubicin resistance ABC transporter ATPase subunit; SMART: AAA ATPase YP_004092967.1 PFAM: protein of unknown function DUF583; KEGG: btk:BT9727_2634 hypothetical protein YP_004092968.1 KEGG: bbe:BBR47_55250 hypothetical protein YP_004092969.1 PFAM: regulatory protein TetR; KEGG: bcy:Bcer98_0833 TetR family transcriptional regulator YP_004092970.1 manually curated; TIGRFAM: YhgE/Pip C-terminal domain protein; YhgE/Pip N-terminal domain protein; KEGG: bce:BC1078 phage infection protein; PFAM: ABC-2 type transporter YP_004092971.1 PFAM: Stage II sporulation protein E; KEGG: amt:Amet_0173 sporulation stage II, protein E; SMART: protein phosphatase 2C domain protein YP_004092972.1 KEGG: cpy:Cphy_0069 hypothetical protein YP_004092973.1 KEGG: cno:NT01CX_2099 glycosy hydrolase family protein; PFAM: glycoside hydrolase family 25; SMART: Glycoside hydrolase, family 25 subgroup YP_004092974.1 KEGG: cce:Ccel_2876 glycosyl transferase family 51; PFAM: glycosyl transferase family 51; penicillin-binding protein transpeptidase YP_004092975.1 KEGG: btb:BMB171_C4953 collagen adhesion protein; TIGRFAM: hypothetical protein; PFAM: Cna B domain protein; Collagen binding domain protein; Gram-positive anchor YP_004092976.1 KEGG: bbe:BBR47_05650 hypothetical protein; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; transcriptional activator domain; SMART: response regulator receiver YP_004092977.1 TIGRFAM: PTS system, mannitol-specific IIC subunit; KEGG: tex:Teth514_0268 PTS system, mannitol-specific IIC subunit; PFAM: phosphotransferase system lactose/cellobiose-specific IIB subunit; phosphotransferase system EIIC YP_004092978.1 KEGG: tex:Teth514_0269 transcriptional antiterminator, BglG; PFAM: PRD domain protein YP_004092979.1 PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system EIIA 2; KEGG: cac:CA_C0156 PTS system mannitol-specific IIA domain-containing protein YP_004092980.1 PFAM: Mannitol dehydrogenase domain; Mannitol dehydrogenase rossman domain; KEGG: cac:CA_C0157 mannitol-1-phosphate 5-dehydrogenase YP_004092981.1 KEGG: cts:Ctha_0683 phosphotransferase system, phosphocarrier protein HPr; TIGRFAM: phosphocarrier, HPr family; PFAM: phosphoryl transfer system HPr YP_004092982.1 KEGG: swo:Swol_0517 sporulation sigma factor SigK; TIGRFAM: RNA polymerase sigma-K factor; RNA polymerase sigma factor, sigma-70 family; PFAM: sigma-70 region 4 domain protein; sigma-70 region 2 domain protein YP_004092983.1 KEGG: gym:GYMC10_3705 MATE efflux family protein; TIGRFAM: MATE efflux family protein; PFAM: multi antimicrobial extrusion protein MatE YP_004092984.1 PFAM: SNARE associated Golgi protein; KEGG: cpy:Cphy_0884 SNARE associated Golgi protein YP_004092985.1 PFAM: metal-dependent phosphohydrolase HD sub domain; KEGG: cpy:Cphy_0261 metal dependent phosphohydrolase; SMART: metal-dependent phosphohydrolase HD region YP_004092986.1 PFAM: Glyoxalase/bleomycin resistance protein/dioxygenase; KEGG: cpf:CPF_0453 glyoxalase family protein YP_004092987.1 KEGG: cpy:Cphy_1131 hypothetical protein YP_004092988.1 KEGG: csc:Csac_0991 aspartate kinase; TIGRFAM: aspartate kinase; aspartate kinase, monofunctional class; PFAM: aspartate/glutamate/uridylate kinase; amino acid-binding ACT domain protein YP_004092989.1 KEGG: csc:Csac_0992 homoserine kinase; TIGRFAM: homoserine kinase; PFAM: GHMP kinase; GHMP kinase domain protein YP_004092990.1 PFAM: homoserine dehydrogenase; homoserine dehydrogenase NAD-binding; KEGG: ate:Athe_1959 homoserine dehydrogenase YP_004092991.1 KEGG: ate:Athe_1958 hypothetical protein; manually curated; PFAM: amino acid-binding ACT domain protein YP_004092992.1 KEGG: cdl:CDR20291_2171 hypothetical protein; TIGRFAM: sporulation integral membrane protein YtvI; PFAM: protein of unknown function UPF0118 YP_004092993.1 PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: bbe:BBR47_01840 hypothetical protein YP_004092994.1 KEGG: lma:LmjF34.0690 hypothetical protein YP_004092995.1 KEGG: cno:NT01CX_2376 glutathione peroxidase; PFAM: glutathione peroxidase YP_004092996.1 KEGG: sti:Sthe_0085 hypothetical protein YP_004092997.1 PFAM: Protein of unknown function, membrane YfhO; KEGG: clo:HMPREF0868_1443 hypothetical protein YP_004092998.1 TIGRFAM: deoxycytidine triphosphate deaminase; KEGG: chu:CHU_2002 deoxycytidine triphosphate deaminase YP_004092999.1 KEGG: ptm:GSPATT00006164001 hypothetical protein YP_004093000.1 KEGG: tte:TTE1561 hypothetical protein; PFAM: transglutaminase domain-containing protein; SMART: transglutaminase domain-containing protein YP_004093001.1 KEGG: plt:Plut_1812 hypothetical protein YP_004093002.1 KEGG: tpd:Teth39_1205 bifunctional riboflavin kinase/FMN adenylyltransferase; TIGRFAM: riboflavin biosynthesis protein RibF; PFAM: Riboflavin kinase; FAD synthetase YP_004093003.1 KEGG: bpd:BURPS668_1742 tRNA pseudouridine synthase B; TIGRFAM: tRNA pseudouridine synthase B; PFAM: pseudouridylate synthase TruB domain protein YP_004093004.1 PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: aac:Aaci_1437 phosphoesterase RecJ domain protein YP_004093005.1 KEGG: ctc:CTC01276 ribosome-binding factor A; TIGRFAM: ribosome-binding factor A; PFAM: ribosome-binding factor A YP_004093006.1 KEGG: tjr:TherJR_1377 translation initiation factor IF-2; TIGRFAM: translation initiation factor IF-2; small GTP-binding protein; PFAM: protein synthesis factor GTP-binding; translation initiation factor IF-2 domain-containing protein; elongation factor Tu domain 2 protein YP_004093007.1 PFAM: ribosomal protein L7Ae/L30e/S12e/Gadd45; KEGG: esi:Exig_1838 ribosomal protein L7Ae/L30e/S12e/Gadd45 YP_004093008.1 PFAM: protein of unknown function DUF448; KEGG: cpr:CPR_1660 hypothetical protein YP_004093009.1 KEGG: tjr:TherJR_1374 transcription termination factor NusA; TIGRFAM: transcription termination factor NusA; PFAM: NusA domain-containing protein; K Homology, type 1, subgroup YP_004093010.1 PFAM: protein of unknown function DUF150; KEGG: adg:Adeg_1666 protein of unknown function DUF150 YP_004093011.1 PFAM: acyl-ACP thioesterase; KEGG: gym:GYMC10_0920 acyl-ACP thioesterase YP_004093012.1 TIGRFAM: seryl-tRNA synthetase; KEGG: csc:Csac_1456 seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like YP_004093013.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: cce:Ccel_0008 ParB-like partition protein; SMART: ParB domain protein nuclease YP_004093014.1 KEGG: drm:Dred_3321 cobyrinic acid a,c-diamide synthase YP_004093015.1 TIGRFAM: parB-like partition protein; PFAM: ParB domain protein nuclease; KEGG: tte:TTE2792 transcriptional regulator; SMART: ParB domain protein nuclease YP_004093016.1 KEGG: afn:Acfer_2075 methyltransferase GidB; TIGRFAM: methyltransferase GidB; PFAM: glucose inhibited division protein YP_004093017.1 KEGG: cth:Cthe_2364 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; TIGRFAM: glucose inhibited division protein A; PFAM: glucose-inhibited division protein A YP_004093018.1 KEGG: gct:GC56T3_3475 tRNA modification GTPase TrmE; TIGRFAM: tRNA modification GTPase TrmE; small GTP-binding protein; PFAM: GTP-binding protein TrmE-like; GTP-binding protein HSR1-related YP_004093019.1 KEGG: cth:Cthe_2366 single-stranded nucleic acid binding R3H; PFAM: single-stranded nucleic acid binding R3H domain-containing protein; SMART: single-stranded nucleic acid binding R3H domain-containing protein YP_004093020.1 KEGG: ate:Athe_2760 60 kDa inner membrane insertion protein; TIGRFAM: membrane protein insertase, YidC/Oxa1 family; PFAM: 60 kDa inner membrane insertion protein YP_004093021.1 PFAM: protein of unknown function DUF37; KEGG: gwc:GWCH70_2790 hypothetical protein YP_004093022.1 KEGG: cth:Cthe_2369 ribonuclease P; TIGRFAM: ribonuclease P protein component; PFAM: ribonuclease P protein YP_004093023.1 KEGG: lgs:LEGAS_1908 50S ribosomal protein L34; TIGRFAM: ribosomal protein L34; PFAM: ribosomal protein L34