-- dump date 20140619_082546 -- class Genbank::CDS -- table cds -- table main -- field 1 id -- field 2 GI -- field 3 GeneID -- field 4 chrom_position -- field 5 chromosome -- field 6 codon_start -- field 7 contig -- field 8 description -- field 9 end_pos -- field 10 gene -- field 11 gene_id -- field 12 name -- field 13 organism -- field 14 product -- field 15 protein_id -- field 16 start_pos -- field 17 strand -- field 18 taxid -- field 19 type -- header -- id GI GeneID chrom_position chromosome codon_start contig description end_pos gene gene_id name organism product protein_id start_pos strand taxid type YP_008720078.1 556550244 17433779 337..2799 1 NC_022648.1 multifunctional homotetrameric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional aspartokinase I/homoserine dehydrogenase I 2799 thrA 17433779 thrA Escherichia coli JJ1886 bifunctional aspartokinase I/homoserine dehydrogenase I YP_008720078.1 337 D 1355100 CDS YP_008720079.1 556550245 17428828 2801..3733 1 NC_022648.1 catalyzes the formation of O-phospho-L-homoserine from L-homoserine in threonine biosynthesis from asparate; Derived by automated computational analysis using gene prediction method: Protein Homology.; homoserine kinase 3733 17428828 P423_00010 Escherichia coli JJ1886 homoserine kinase YP_008720079.1 2801 D 1355100 CDS YP_008720080.1 556550246 17433778 3734..5020 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine synthase 5020 17433778 P423_00015 Escherichia coli JJ1886 threonine synthase YP_008720080.1 3734 D 1355100 CDS YP_008720081.1 556550247 17428829 5234..5530 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5530 17428829 P423_00020 Escherichia coli JJ1886 hypothetical protein YP_008720081.1 5234 D 1355100 CDS YP_008720082.1 556550248 17428830 complement(5570..6346) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 6346 17428830 P423_00025 Escherichia coli JJ1886 hypothetical protein YP_008720082.1 5570 R 1355100 CDS YP_008720083.1 556550249 17428831 complement(6416..7846) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:alanine symporter 7846 17428831 P423_00030 Escherichia coli JJ1886 sodium:alanine symporter YP_008720083.1 6416 R 1355100 CDS YP_008720084.1 556550250 17428832 8125..9078 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transaldolase 9078 17428832 P423_00035 Escherichia coli JJ1886 transaldolase YP_008720084.1 8125 D 1355100 CDS YP_008720085.1 556550251 17428833 9193..9780 1 NC_022648.1 forms a trimer; related to eukaryotic protein gephyrin; functions during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum cofactor biosynthesis protein MogA 9780 mogA 17428833 mogA Escherichia coli JJ1886 molybdenum cofactor biosynthesis protein MogA YP_008720085.1 9193 D 1355100 CDS YP_008720086.1 556550252 17428834 complement(9815..10381) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 10381 17428834 P423_00045 Escherichia coli JJ1886 hypothetical protein YP_008720086.1 9815 R 1355100 CDS YP_008720087.1 556550253 17428835 complement(10530..11243) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 11243 17428835 P423_00050 Escherichia coli JJ1886 hypothetical protein YP_008720087.1 10530 R 1355100 CDS YP_008720088.1 556550254 17428836 complement(11269..11673) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 11673 17428836 P423_00055 Escherichia coli JJ1886 hypothetical protein YP_008720088.1 11269 R 1355100 CDS YP_008720089.1 556550255 17428837 12044..13960 1 NC_022648.1 heat shock protein 70; assists in folding of nascent polypeptide chains; refolding of misfolded proteins; utilizes ATPase activity to help fold; co-chaperones are DnaJ and GrpE; multiple copies in some bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaK 13960 dnaK 17428837 dnaK Escherichia coli JJ1886 molecular chaperone DnaK YP_008720089.1 12044 D 1355100 CDS YP_008720090.1 556550256 17428838 14049..15179 1 NC_022648.1 chaperone Hsp40; co-chaperone with DnaK; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, dnaK-independent fashion; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaJ 15179 17428838 P423_00065 Escherichia coli JJ1886 molecular chaperone DnaJ YP_008720090.1 14049 D 1355100 CDS YP_008720091.1 556550257 17428839 complement(15283..15435) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 15435 17428839 P423_00070 Escherichia coli JJ1886 hypothetical protein YP_008720091.1 15283 R 1355100 CDS YP_008720092.1 556554220 17428840 16049..16810 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 16810 17428840 P423_00075 Escherichia coli JJ1886 hypothetical protein YP_008720092.1 16049 D 1355100 CDS YP_008720093.1 556554221 17428841 16831..18324 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; arylsulfatase 18324 17428841 P423_00080 Escherichia coli JJ1886 arylsulfatase YP_008720093.1 16831 D 1355100 CDS YP_008720094.1 556554222 17428842 18798..19712 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 19712 17428842 P423_00085 Escherichia coli JJ1886 hypothetical protein YP_008720094.1 18798 D 1355100 CDS YP_008720095.1 556550258 17428843 19947..21113 1 NC_022648.1 exports sodium by using the electrochemical proton gradient to allow protons into the cell; functions in adaptation to high salinity and alkaline pH; activity increases at higher pH; downregulated at acidic pH; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 21113 nhaA 17428843 nhaA Escherichia coli JJ1886 sodium:proton antiporter YP_008720095.1 19947 D 1355100 CDS YP_008720096.1 556550259 17428844 21173..22078 1 NC_022648.1 Na+/H+ antiporter regulatory protein; activates the genes nhaA and osmC; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 22078 nhaR 17428844 nhaR Escherichia coli JJ1886 transcriptional regulator YP_008720096.1 21173 D 1355100 CDS YP_008720097.1 556554223 17428845 complement(22136..24175) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; family 31 glucosidase 24175 17428845 P423_00100 Escherichia coli JJ1886 family 31 glucosidase YP_008720097.1 22136 R 1355100 CDS YP_008720098.1 556554224 17428846 complement(24203..25576) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sodium:solute symporter 25576 17428846 P423_00105 Escherichia coli JJ1886 sodium:solute symporter YP_008720098.1 24203 R 1355100 CDS YP_008720099.1 556550260 17428847 complement(25965..26228) 1 NC_022648.1 binds directly to the 16S rRNA and is involved in post-translational inhibition of arginine and ornithine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S20 26228 rpsT 17428847 rpsT Escherichia coli JJ1886 30S ribosomal protein S20 YP_008720099.1 25965 R 1355100 CDS YP_008720100.1 556550261 17428848 26331..26549 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 26549 17428848 P423_00115 Escherichia coli JJ1886 hypothetical protein YP_008720100.1 26331 D 1355100 CDS YP_008720101.1 556550262 17428849 26557..27498 1 NC_022648.1 catalyzes the formation of FMN from riboflavin and the formation of FAD from FMN; in Bacillus the ribC gene has both flavokinase and FAD synthetase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional riboflavin kinase/FMN adenylyltransferase 27498 17428849 P423_00120 Escherichia coli JJ1886 bifunctional riboflavin kinase/FMN adenylyltransferase YP_008720101.1 26557 D 1355100 CDS YP_008720102.1 556550263 17428850 27541..30357 1 NC_022648.1 IleRS; catalyzes the formation of isoleucyl-tRNA(Ile) from isoleucine and tRNA(Ile); since isoleucine and other amino acids such as valine are similar, there are additional editing function in this enzyme; one is involved in hydrolysis of activated valine-AMP and the other is involved in deacylation of mischarged Val-tRNA(Ile); there are two active sites, one for aminoacylation and one for editing; class-I aminoacyl-tRNA synthetase family type 1 subfamily; some organisms carry two different copies of this enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; isoleucyl-tRNA synthetase 30357 ileS 17428850 ileS Escherichia coli JJ1886 isoleucyl-tRNA synthetase YP_008720102.1 27541 D 1355100 CDS YP_008720103.1 556550264 17428851 30357..30851 1 NC_022648.1 lipoprotein signal peptidase; integral membrane protein that removes signal peptides from prolipoproteins during lipoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein signal peptidase 30851 lspA 17428851 lspA Escherichia coli JJ1886 lipoprotein signal peptidase YP_008720103.1 30357 D 1355100 CDS YP_008720104.1 556550265 17428852 30959..31408 1 NC_022648.1 rotamase; accelerates isomerization of the peptidyl prolyl bond, involved in the folding of proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 31408 17428852 P423_00135 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008720104.1 30959 D 1355100 CDS YP_008720105.1 556550266 17428853 31410..32360 1 NC_022648.1 catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate into isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP); functions in the nonmevalonate isoprenoid biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase 32360 ispH 17428853 ispH Escherichia coli JJ1886 4-hydroxy-3-methylbut-2-enyl diphosphate reductase YP_008720105.1 31410 D 1355100 CDS YP_008720106.1 556550267 17428854 32426..33340 1 NC_022648.1 catalyzes the hydrolysis of both purine and pyrimidine ribonucleosides; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside hydrolase 33340 17428854 P423_00145 Escherichia coli JJ1886 ribonucleoside hydrolase YP_008720106.1 32426 D 1355100 CDS YP_008720107.1 556554225 17428855 33363..33728 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 33728 17428855 P423_00150 Escherichia coli JJ1886 hypothetical protein YP_008720107.1 33363 D 1355100 CDS YP_008720108.1 556550268 17428856 33889..34710 1 NC_022648.1 catalyzes the reduction of 2,3-dihydrodipicolinate to 2,3,4,5-tetrahydrodipicolinate in lysine and diaminopimelate biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrodipicolinate reductase 34710 17428856 P423_00155 Escherichia coli JJ1886 dihydrodipicolinate reductase YP_008720108.1 33889 D 1355100 CDS YP_008720109.1 556550269 17428857 35166..36314 1 NC_022648.1 catalyzes production of carbamoyl phosphate from bicarbonate and glutamine in pyrimidine and arginine biosynthesis pathways; forms an octamer composed of four CarAB dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl phosphate synthase small subunit 36314 17428857 P423_00160 Escherichia coli JJ1886 carbamoyl phosphate synthase small subunit YP_008720109.1 35166 D 1355100 CDS YP_008720110.1 556550270 17428858 36332..39553 1 NC_022648.1 four CarB-CarA dimers form the carbamoyl phosphate synthetase holoenzyme that catalyzes the production of carbamoyl phosphate; CarB is responsible for the amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl phosphate synthase large subunit 39553 carB 17428858 carB Escherichia coli JJ1886 carbamoyl phosphate synthase large subunit YP_008720110.1 36332 D 1355100 CDS YP_008720111.1 556550271 17428859 39814..40209 1 NC_022648.1 regulator of carnitine metabolism; induces the caiTABCDE and fixABCX operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 40209 17428859 P423_00170 Escherichia coli JJ1886 transcriptional regulator YP_008720111.1 39814 D 1355100 CDS YP_008720112.1 556550272 17428860 complement(40328..40918) 1 NC_022648.1 involved in the synthesis of a cofactor required for carnitine dehydratase and carnitine racemase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; carnitine operon protein CaiE 40918 17428860 P423_00175 Escherichia coli JJ1886 carnitine operon protein CaiE YP_008720112.1 40328 R 1355100 CDS YP_008720113.1 556550273 17428861 complement(40924..41709) 1 NC_022648.1 catalyzes the dehydration of L-carnitinyl-CoA to crotonobetainyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; carnitinyl-CoA dehydratase 41709 17428861 P423_00180 Escherichia coli JJ1886 carnitinyl-CoA dehydratase YP_008720113.1 40924 R 1355100 CDS YP_008720114.1 556550274 17428862 complement(41818..43371) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; crotonobetaine/carnitine-CoA ligase 43371 caiC 17428862 caiC Escherichia coli JJ1886 crotonobetaine/carnitine-CoA ligase YP_008720114.1 41818 R 1355100 CDS YP_008720115.1 556550275 17428863 complement(43444..44661) 1 NC_022648.1 catalyzes formation of L-carnitinyl-CoA by transfering the CoA moiety from gamma-butyrobetainyl-CoA, also catalyzes the formation of crotonobetainyl-CoA by transfer of CoA from gamma-butyrobetainyl-CoA or L-carnitinyl-CoA to crotonobetaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; crotonobetainyl-CoA:carnitine CoA-transferase 44661 17428863 P423_00190 Escherichia coli JJ1886 crotonobetainyl-CoA:carnitine CoA-transferase YP_008720115.1 43444 R 1355100 CDS YP_008720116.1 556550276 17428864 complement(44790..45932) 1 NC_022648.1 catalyzes the reduction of crotonobetainyl-CoA to gamma-butyrobetainyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; crotonobetainyl-CoA dehydrogenase 45932 17428864 P423_00195 Escherichia coli JJ1886 crotonobetainyl-CoA dehydrogenase YP_008720116.1 44790 R 1355100 CDS YP_008720117.1 556550277 17428865 complement(45963..47477) 1 NC_022648.1 catalyzes the exchange of L-carnitine for gamma-butyrobetaine in carnitine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 47477 17428865 P423_00200 Escherichia coli JJ1886 antiporter YP_008720117.1 45963 R 1355100 CDS YP_008720118.1 556550278 17428866 47950..48720 1 NC_022648.1 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein FixB 48720 17428866 P423_00205 Escherichia coli JJ1886 electron transfer flavoprotein FixB YP_008720118.1 47950 D 1355100 CDS YP_008720119.1 556550279 17428867 48735..49676 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein fixB 49676 17428867 P423_00210 Escherichia coli JJ1886 protein fixB YP_008720119.1 48735 D 1355100 CDS YP_008720120.1 556550280 17428868 49727..51013 1 NC_022648.1 FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase FixC 51013 17428868 P423_00215 Escherichia coli JJ1886 oxidoreductase FixC YP_008720120.1 49727 D 1355100 CDS YP_008720121.1 556550281 17428869 51010..51297 1 NC_022648.1 necessary for anaerobic carnitine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin FixX 51297 17428869 P423_00220 Escherichia coli JJ1886 ferredoxin FixX YP_008720121.1 51010 D 1355100 CDS YP_008720122.1 556550282 17428870 51356..52687 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metabolite transporter 52687 17428870 P423_00225 Escherichia coli JJ1886 metabolite transporter YP_008720122.1 51356 D 1355100 CDS YP_008720123.1 556550283 17428871 52795..53325 1 NC_022648.1 Required for full activity of KefC, a potassium-proton antiporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 53325 17428871 P423_00230 Escherichia coli JJ1886 potassium transporter YP_008720123.1 52795 D 1355100 CDS YP_008720124.1 556550284 17428872 53318..55180 1 NC_022648.1 transport system that facilitates potassium-efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 55180 17428872 P423_00235 Escherichia coli JJ1886 potassium transporter YP_008720124.1 53318 D 1355100 CDS YP_008720125.1 556550285 17428873 55261..55851 1 NC_022648.1 catalyzes the reduction of dihydrofolate to tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrofolate reductase 55851 folA 17428873 folA Escherichia coli JJ1886 dihydrofolate reductase YP_008720125.1 55261 D 1355100 CDS YP_008720126.1 556550286 17428874 55937..56170 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 56170 17428874 P423_00245 Escherichia coli JJ1886 antitoxin YP_008720126.1 55937 D 1355100 CDS YP_008720127.1 556550287 17428876 complement(56484..57332) 1 NC_022648.1 hydrolyzes P(1),P(4)-bis(5'-adenosyl) tetraphosphate to form 2 ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; diadenosine tetraphosphatase 57332 apaH 17428876 apaH Escherichia coli JJ1886 diadenosine tetraphosphatase YP_008720127.1 56484 R 1355100 CDS YP_008720128.1 556550288 17428877 complement(57339..57716) 1 NC_022648.1 protein associated with Co2+ and Mg2+ efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt transporter 57716 apaG 17428877 apaG Escherichia coli JJ1886 cobalt transporter YP_008720128.1 57339 R 1355100 CDS YP_008720129.1 556550289 17428878 complement(57719..58540) 1 NC_022648.1 in Escherichia coli this enzyme catalyzes the transfer of a total of four methyl groups from S-adenosyl-l-methionine (S-AdoMet) to two adjacent adenosine bases A1518 and A1519 in 16S rRNA; mutations in ksgA causes resistance to the translation initiation inhibitor kasugamycin; members of this protein family have secondary functions; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 58540 ksgA 17428878 ksgA Escherichia coli JJ1886 16S rRNA methyltransferase YP_008720129.1 57719 R 1355100 CDS YP_008720130.1 556550290 17428879 complement(58537..59526) 1 NC_022648.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxythreonine-4-phosphate dehydrogenase 59526 pdxA 17428879 pdxA Escherichia coli JJ1886 4-hydroxythreonine-4-phosphate dehydrogenase YP_008720130.1 58537 R 1355100 CDS YP_008720131.1 556550291 17428880 complement(59526..60812) 1 NC_022648.1 Chaperone involved in the folding of extracytoplasmic proteins, especially OmpA, OmpF and LamB; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 60812 17428880 P423_00275 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008720131.1 59526 R 1355100 CDS YP_008720132.1 556550292 17428881 complement(60865..63219) 1 NC_022648.1 is involved in outer membrane permeability; Derived by automated computational analysis using gene prediction method: Protein Homology.; LPS assembly outer membrane complex protein LptD 63219 17428881 P423_00280 Escherichia coli JJ1886 LPS assembly outer membrane complex protein LptD YP_008720132.1 60865 R 1355100 CDS YP_008720133.1 556550293 17428882 63474..64289 1 NC_022648.1 functions as a co-chaperone with DnaK; involved in regulation of colanic acid capsule; inner membrane protein; dimerized via transmembrane domain; J-like domain is cytoplasmic and can functionally substitute for DnaJ; stimulates synthesis of colanic acid mucoid capsule through the RcsB/C signal transduction system; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone DnaJ 64289 djlA 17428882 djlA Escherichia coli JJ1886 molecular chaperone DnaJ YP_008720133.1 63474 D 1355100 CDS YP_008720134.1 556550294 17428883 complement(64439..65098) 1 NC_022648.1 catalyzes the synthesis of pseudouridine from uracil-746 in 23S ribosomal RNA and from uracil-32 in the anticodon stem and loop of transfer RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA/tRNA pseudouridine synthase A 65098 17428883 P423_00290 Escherichia coli JJ1886 23S rRNA/tRNA pseudouridine synthase A YP_008720134.1 64439 R 1355100 CDS YP_008720135.1 556550295 17428884 complement(65110..68016) 1 NC_022648.1 transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent helicase 68016 17428884 P423_00295 Escherichia coli JJ1886 ATP-dependent helicase YP_008720135.1 65110 R 1355100 CDS YP_008720136.1 556550296 17428885 complement(68181..70532) 1 NC_022648.1 Has polymerase, DNA-binding and 3'-5' exonuclease activities. In Aeropyrum pernix this protein is sensitive to aphidicolin and stable at 95#C; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase II 70532 17428885 P423_00300 Escherichia coli JJ1886 DNA polymerase II YP_008720136.1 68181 R 1355100 CDS YP_008720137.1 556550297 17428886 complement(70607..71302) 1 NC_022648.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ribulose-5-phosphate 4-epimerase 71302 araD 17428886 araD Escherichia coli JJ1886 L-ribulose-5-phosphate 4-epimerase YP_008720137.1 70607 R 1355100 CDS YP_008720138.1 556550298 17428887 complement(71417..72919) 1 NC_022648.1 catalyzes the formation of L-ribulose from L-arabinose in L-arabinose catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose isomerase 72919 17428887 P423_00310 Escherichia coli JJ1886 arabinose isomerase YP_008720138.1 71417 R 1355100 CDS YP_008720139.1 556550299 17428888 complement(72930..74630) 1 NC_022648.1 catalyzes the phosphorylation of ribulose to ribulose 5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribulokinase 74630 17428888 P423_00315 Escherichia coli JJ1886 ribulokinase YP_008720139.1 72930 R 1355100 CDS YP_008720140.1 556550300 17428889 74960..75814 1 NC_022648.1 positive and negative regulator; regulates the araBAD and araFGH operons and other genes involved in the transport and catabolism of L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 75814 17428889 P423_00320 Escherichia coli JJ1886 transcriptional regulator YP_008720140.1 74960 D 1355100 CDS YP_008720141.1 556554226 17428890 76038..77270 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RbsK 77270 17428890 P423_00325 Escherichia coli JJ1886 RbsK YP_008720141.1 76038 D 1355100 CDS YP_008720142.1 556554227 17428891 77296..78219 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dihydrodipicolinate synthetase 78219 17428891 P423_00330 Escherichia coli JJ1886 dihydrodipicolinate synthetase YP_008720142.1 77296 D 1355100 CDS YP_008720143.1 556554228 17428892 78274..79227 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter substrate-binding protein 79227 17428892 P423_00335 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008720143.1 78274 D 1355100 CDS YP_008720144.1 556554229 17428893 79276..79713 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 79713 17428893 P423_00340 Escherichia coli JJ1886 membrane protein YP_008720144.1 79276 D 1355100 CDS YP_008720145.1 556554230 17428894 79723..81210 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter permease 81210 17428894 P423_00345 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter permease YP_008720145.1 79723 D 1355100 CDS YP_008720146.1 556550301 17428895 81394..82158 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 82158 17428895 P423_00350 Escherichia coli JJ1886 membrane protein YP_008720146.1 81394 D 1355100 CDS YP_008720147.1 556550302 17428896 complement(82272..82970) 1 NC_022648.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic substrate-binding subunit, SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; aliphatic sulfonate ABC transporter ATP-binding protein 82970 ssuB 17428896 ssuB Escherichia coli JJ1886 aliphatic sulfonate ABC transporter ATP-binding protein YP_008720147.1 82272 R 1355100 CDS YP_008720148.1 556550303 17428897 complement(82954..84564) 1 NC_022648.1 permease; with TbpA and ThiQ functions in transport of thiamine and thiamine pyrophosphate into the cell; repressed in presence of exogenous thiamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine transporter membrane protein 84564 thiP 17428897 thiP Escherichia coli JJ1886 thiamine transporter membrane protein YP_008720148.1 82954 R 1355100 CDS YP_008720149.1 556550304 17428898 complement(84540..85523) 1 NC_022648.1 part of the thiamine and TPP transport system tbpA-thiPQ; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine ABC transporter substrate-binding protein 85523 tbpA 17428898 tbpA Escherichia coli JJ1886 thiamine ABC transporter substrate-binding protein YP_008720149.1 84540 R 1355100 CDS YP_008720150.1 556550305 17428899 complement(85687..87342) 1 NC_022648.1 activates sgrS under glucose-phosphate stress conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 87342 17428899 P423_00370 Escherichia coli JJ1886 transcriptional regulator YP_008720150.1 85687 R 1355100 CDS YP_008720151.1 556554231 17428900 87431..87562 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; inhibitor of glucose transporter 87562 17428900 P423_00375 Escherichia coli JJ1886 inhibitor of glucose transporter YP_008720151.1 87431 D 1355100 CDS YP_008720152.1 556550306 17428901 complement(87669..88274) 1 NC_022648.1 catalyzes the isomerization between 2-isopropylmalate and 3-isopropylmalate in leucine biosynthesis; forms a heterodimer of LeuC/D; Derived by automated computational analysis using gene prediction method: Protein Homology.; isopropylmalate isomerase 88274 leuD 17428901 leuD Escherichia coli JJ1886 isopropylmalate isomerase YP_008720152.1 87669 R 1355100 CDS YP_008720153.1 556550307 17428902 complement(88285..89685) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-isopropylmalate dehydratase large subunit 89685 17428902 P423_00385 Escherichia coli JJ1886 3-isopropylmalate dehydratase large subunit YP_008720153.1 88285 R 1355100 CDS YP_008720154.1 556550308 17428903 complement(89688..90779) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-isopropylmalate dehydrogenase 90779 17428903 P423_00390 Escherichia coli JJ1886 3-isopropylmalate dehydrogenase YP_008720154.1 89688 R 1355100 CDS YP_008720155.1 556550309 17428904 complement(90779..92350) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-isopropylmalate synthase 92350 17428904 P423_00395 Escherichia coli JJ1886 2-isopropylmalate synthase YP_008720155.1 90779 R 1355100 CDS YP_008720156.1 556550310 17428905 93186..94130 1 NC_022648.1 activator for leuABCD operon; member of LysR family of transcriptional activators; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine transcriptional activator 94130 leuO 17428905 leuO Escherichia coli JJ1886 leucine transcriptional activator YP_008720156.1 93186 D 1355100 CDS YP_008720157.1 556550311 17428906 94448..96172 1 NC_022648.1 catalyzes the formation of 2-acetolactate from pyruvate, leucine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 96172 17428906 P423_00405 Escherichia coli JJ1886 acetolactate synthase YP_008720157.1 94448 D 1355100 CDS YP_008720158.1 556550312 17428907 96175..96666 1 NC_022648.1 with IlvI catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase 3 small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 96666 ilvH 17428907 ilvH Escherichia coli JJ1886 acetolactate synthase YP_008720158.1 96175 D 1355100 CDS YP_008720159.1 556550313 17428908 96846..97850 1 NC_022648.1 binds D-fructose as an inducer; involved in regulation of operons for central pathways of carbon metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 97850 17428908 P423_00415 Escherichia coli JJ1886 transcriptional regulator YP_008720159.1 96846 D 1355100 CDS YP_008720160.1 556550314 17428909 98452..98910 1 NC_022648.1 MraZ; UPF0040; crystal structure shows similarity to AbrB; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein MraZ 98910 17428909 P423_00420 Escherichia coli JJ1886 cell division protein MraZ YP_008720160.1 98452 D 1355100 CDS YP_008720161.1 556550315 17428910 98912..99853 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 99853 17428910 P423_00425 Escherichia coli JJ1886 16S rRNA methyltransferase YP_008720161.1 98912 D 1355100 CDS YP_008720162.1 556550316 17428911 99850..100215 1 NC_022648.1 membrane bound cell division protein at septum containing leucine zipper motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsL 100215 17428911 P423_00430 Escherichia coli JJ1886 cell division protein FtsL YP_008720162.1 99850 D 1355100 CDS YP_008720163.1 556550317 17428912 100231..101997 1 NC_022648.1 penicillin-binding protein 3; transpeptidase involved in septal peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsI 101997 17428912 P423_00435 Escherichia coli JJ1886 cell division protein FtsI YP_008720163.1 100231 D 1355100 CDS YP_008720164.1 556550318 17428913 101984..103471 1 NC_022648.1 involved in cell wall formation; peptidoglycan synthesis; cytoplasmic enzyme; catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-aceylmuramoyl-l-alanyl-d-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase 103471 murE 17428913 murE Escherichia coli JJ1886 UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase YP_008720164.1 101984 D 1355100 CDS YP_008720165.1 556550319 17428914 103468..104826 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase 104826 murF 17428914 murF Escherichia coli JJ1886 UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase YP_008720165.1 103468 D 1355100 CDS YP_008720166.1 556550320 17428915 104820..105902 1 NC_022648.1 First step of the lipid cycle reactions in the biosynthesis of the cell wall peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-N-acetylmuramoyl-pentapeptide- transferase 105902 mraY 17428915 mraY Escherichia coli JJ1886 phospho-N-acetylmuramoyl-pentapeptide- transferase YP_008720166.1 104820 D 1355100 CDS YP_008720167.1 556550321 17428916 105905..107221 1 NC_022648.1 UDP-N-acetylmuramoylalanine--D-glutamate ligase; involved in peptidoglycan biosynthesis; cytoplasmic; catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine during cell wall formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase 107221 murD 17428916 murD Escherichia coli JJ1886 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase YP_008720167.1 105905 D 1355100 CDS YP_008720168.1 556550322 17428917 107221..108465 1 NC_022648.1 integral membrane protein involved in stabilizing FstZ ring during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsW 108465 17428917 P423_00460 Escherichia coli JJ1886 cell division protein FtsW YP_008720168.1 107221 D 1355100 CDS YP_008720169.1 556550323 17428918 108462..109529 1 NC_022648.1 N-acetylglucosaminyl transferase; UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase; involved in cell wall formation; inner membrane-associated; last step of peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase 109529 murG 17428918 murG Escherichia coli JJ1886 UDP-diphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase YP_008720169.1 108462 D 1355100 CDS YP_008720170.1 556550324 17428919 109583..111058 1 NC_022648.1 Catalyzes the formation of UDP-N-acetylmuramoyl-L-alanine from UDP-N-acetylmuramate and L-alanine in peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramate--alanine ligase 111058 murC 17428919 murC Escherichia coli JJ1886 UDP-N-acetylmuramate--alanine ligase YP_008720170.1 109583 D 1355100 CDS YP_008720171.1 556550325 17428920 111051..111971 1 NC_022648.1 D-alanine--D-alanine ligase; DdlA; DdlB; cytoplasmic; catalyzes the formation of D-alanyl-D-alanine from two D-alanines in peptidoglycan synthesis; there are two forms of this enzyme in Escherichia coli; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanine--D-alanine ligase 111971 ddl 17428920 ddl Escherichia coli JJ1886 D-alanine--D-alanine ligase YP_008720171.1 111051 D 1355100 CDS YP_008720172.1 556550326 17428921 111973..112803 1 NC_022648.1 involved in septum formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsQ 112803 17428921 P423_00480 Escherichia coli JJ1886 cell division protein FtsQ YP_008720172.1 111973 D 1355100 CDS YP_008720173.1 556550327 17428922 112800..114062 1 NC_022648.1 ATP-binding involved in recruitment of FtsK to Z ring; essential cell division protein; colocalizes with FtsZ through direct interaction to the septal ring structure; structurally similar to eukaryotic actin; binds directly to the cell membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsA 114062 ftsA 17428922 ftsA Escherichia coli JJ1886 cell division protein FtsA YP_008720173.1 112800 D 1355100 CDS YP_008720174.1 556550328 17428923 114123..115274 1 NC_022648.1 GTPase; similar structure to tubulin; forms ring-shaped polymers at the site of cell division; other proteins such as FtsA, ZipA, and ZapA, interact with and regulate FtsZ function; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M23 115274 17428923 P423_00490 Escherichia coli JJ1886 peptidase M23 YP_008720174.1 114123 D 1355100 CDS YP_008720175.1 556550329 17428924 115375..116292 1 NC_022648.1 zinc-dependent; catalyzes the deacetylation of UDP-(3-O-acyl)-N-acetylglucosamine to UDP-3-O-(3-hydroxytetradecanoyl)-glucosamine in the second step of lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 116292 lpxC 17428924 lpxC Escherichia coli JJ1886 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_008720175.1 115375 D 1355100 CDS YP_008720176.1 556554232 17428925 116351..117034 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; secretion monitor protein 117034 17428925 P423_00500 Escherichia coli JJ1886 secretion monitor protein YP_008720176.1 116351 D 1355100 CDS YP_008720177.1 556550330 17428926 117096..119801 1 NC_022648.1 functions in protein export; can interact with acidic membrane phospholipids and the SecYEG protein complex; binds to preproteins; binds to ATP and undergoes a conformational change to promote membrane insertion of SecA/bound preprotein; ATP hydrolysis appears to drive release of the preprotein from SecA and deinsertion of SecA from the membrane; additional proteins SecD/F/YajC aid SecA recycling; exists in an equilibrium between monomers and dimers; may possibly form higher order oligomers; proteins in this cluster correspond SecA1; SecA2 is not essential and seems to play a role in secretion of a subset of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecA 119801 secA 17428926 secA Escherichia coli JJ1886 preprotein translocase subunit SecA YP_008720177.1 117096 D 1355100 CDS YP_008720178.1 556550331 17428927 119861..120259 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate pyrophosphohydrolase 120259 17428927 P423_00510 Escherichia coli JJ1886 nucleoside triphosphate pyrophosphohydrolase YP_008720178.1 119861 D 1355100 CDS YP_008720179.1 556550332 17428928 complement(120347..120544) 1 NC_022648.1 inhibits supercoiling by DNA gyrase by binding to the GyrB subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase inhibitor 120544 17428928 P423_00515 Escherichia coli JJ1886 DNA gyrase inhibitor YP_008720179.1 120347 R 1355100 CDS YP_008720180.1 556550333 17428929 complement(120554..121297) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 121297 17428929 P423_00520 Escherichia coli JJ1886 hypothetical protein YP_008720180.1 120554 R 1355100 CDS YP_008720181.1 556550334 17428930 complement(121297..121917) 1 NC_022648.1 catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; involved in coenzyme A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; dephospho-CoA kinase 121917 coaE 17428930 coaE Escherichia coli JJ1886 dephospho-CoA kinase YP_008720181.1 121297 R 1355100 CDS YP_008720182.1 556550335 17428931 122142..123185 1 NC_022648.1 catalyzes the NADPH-dependent deamination of GMP to inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanosine 5'-monophosphate oxidoreductase 123185 17428931 P423_00530 Escherichia coli JJ1886 guanosine 5'-monophosphate oxidoreductase YP_008720182.1 122142 D 1355100 CDS YP_008720183.1 556550336 17428932 complement(123220..124422) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type IV pilin biogenesis protein 124422 17428932 P423_00535 Escherichia coli JJ1886 type IV pilin biogenesis protein YP_008720183.1 123220 R 1355100 CDS YP_008720184.1 556550337 17428934 complement(125807..126247) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major pilin subunit 126247 17428934 P423_00545 Escherichia coli JJ1886 major pilin subunit YP_008720184.1 125807 R 1355100 CDS YP_008720185.1 556550338 17428935 complement(126451..127344) 1 NC_022648.1 catalyzes the formation of pyridine-2,3-dicarboxylate and 5-phospho-alpha-D-ribose 1-diphosphate from nictinate D-ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinate-nucleotide pyrophosphorylase 127344 17428935 P423_00550 Escherichia coli JJ1886 nicotinate-nucleotide pyrophosphorylase YP_008720185.1 126451 R 1355100 CDS YP_008720186.1 556550339 17428936 127432..127983 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyl-anhydromuranmyl-L-alanine amidase 127983 17428936 P423_00555 Escherichia coli JJ1886 N-acetyl-anhydromuranmyl-L-alanine amidase YP_008720186.1 127432 D 1355100 CDS YP_008720187.1 556550340 17428937 127980..128834 1 NC_022648.1 involved in regulation of beta-lactamase; putative signaling protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 128834 17428937 P423_00560 Escherichia coli JJ1886 regulatory protein YP_008720187.1 127980 D 1355100 CDS YP_008720188.1 556550341 17428938 complement(128877..130247) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid transporter 130247 17428938 P423_00565 Escherichia coli JJ1886 aromatic amino acid transporter YP_008720188.1 128877 R 1355100 CDS YP_008720189.1 556550342 17428939 130775..132556 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 132556 17428939 P423_00570 Escherichia coli JJ1886 hypothetical protein YP_008720189.1 130775 D 1355100 CDS YP_008720190.1 556554233 17428940 132559..132843 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; colicin immunity protein / pyocin immunity protein 132843 17428940 P423_00575 Escherichia coli JJ1886 colicin immunity protein / pyocin immunity protein YP_008720190.1 132559 D 1355100 CDS YP_008720191.1 556554234 17428941 133011..133250 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 133250 17428941 P423_00580 Escherichia coli JJ1886 hypothetical protein YP_008720191.1 133011 D 1355100 CDS YP_008720192.1 556554235 17428942 133251..133541 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; colicin immunity protein / pyocin immunity protein 133541 17428942 P423_00585 Escherichia coli JJ1886 colicin immunity protein / pyocin immunity protein YP_008720192.1 133251 D 1355100 CDS YP_008720193.1 556554236 17428943 133708..133896 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 133896 17428943 P423_00590 Escherichia coli JJ1886 hypothetical protein YP_008720193.1 133708 D 1355100 CDS YP_008720194.1 556554237 17428944 133950..134240 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; colicin immunity protein / pyocin immunity protein 134240 17428944 P423_00595 Escherichia coli JJ1886 colicin immunity protein / pyocin immunity protein YP_008720194.1 133950 D 1355100 CDS YP_008720195.1 556554238 17428945 134408..134647 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 134647 17428945 P423_00600 Escherichia coli JJ1886 hypothetical protein YP_008720195.1 134408 D 1355100 CDS YP_008720196.1 556554239 17428946 134648..134938 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; colicin immunity protein / pyocin immunity protein 134938 17428946 P423_00605 Escherichia coli JJ1886 colicin immunity protein / pyocin immunity protein YP_008720196.1 134648 D 1355100 CDS YP_008720197.1 556550343 17428947 135394..136158 1 NC_022648.1 activates lctPRD operon; autoregulates itself through repression of pdhR-aceEF-lpdA operon; regulates pyruvate dehydrogenase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 136158 pdhR 17428947 pdhR Escherichia coli JJ1886 transcriptional regulator YP_008720197.1 135394 D 1355100 CDS YP_008720198.1 556550344 17428948 136319..138982 1 NC_022648.1 E1 component; part of pyruvate dehydrogenase; forms a complex with DlaT and LpdC; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate dehydrogenase 138982 aceE 17428948 aceE Escherichia coli JJ1886 pyruvate dehydrogenase YP_008720198.1 136319 D 1355100 CDS YP_008720199.1 556550345 17428949 138997..140889 1 NC_022648.1 E2 component of pyruvate dehydrogenase multienzyme complex; in Escherichia coli AceF contains three N-terminal lipoyl domains; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide acetyltransferase 140889 aceF 17428949 aceF Escherichia coli JJ1886 dihydrolipoamide acetyltransferase YP_008720199.1 138997 D 1355100 CDS YP_008720200.1 556550346 17428950 141094..142521 1 NC_022648.1 E3 component of pyruvate and 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide dehydrogenase 142521 17428950 P423_00625 Escherichia coli JJ1886 dihydrolipoamide dehydrogenase YP_008720200.1 141094 D 1355100 CDS YP_008720201.1 556550347 17428951 complement(142592..144355) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 144355 17428951 P423_00630 Escherichia coli JJ1886 hypothetical protein YP_008720201.1 142592 R 1355100 CDS YP_008720202.1 556550348 17428952 144710..147307 1 NC_022648.1 catalyzes the conversion of citrate to isocitrate and the conversion of 2-methylaconitate to 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase 147307 17428952 P423_00635 Escherichia coli JJ1886 bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase YP_008720202.1 144710 D 1355100 CDS YP_008720203.1 556550349 17428953 147482..147844 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 147844 17428953 P423_00640 Escherichia coli JJ1886 hypothetical protein YP_008720203.1 147482 D 1355100 CDS YP_008720204.1 556550350 17428954 complement(147882..148676) 1 NC_022648.1 S-adenosylmethionine provides the aminopropyl moiety required for spermidine biosynthesis from putrescine; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine decarboxylase 148676 17428954 P423_00645 Escherichia coli JJ1886 S-adenosylmethionine decarboxylase YP_008720204.1 147882 R 1355100 CDS YP_008720205.1 556550351 17428955 complement(148692..149558) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine synthase 149558 17428955 P423_00650 Escherichia coli JJ1886 spermidine synthase YP_008720205.1 148692 R 1355100 CDS YP_008720206.1 556550352 17428956 complement(149664..150011) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 150011 17428956 P423_00655 Escherichia coli JJ1886 hypothetical protein YP_008720206.1 149664 R 1355100 CDS YP_008720207.1 556550353 17428957 150177..151727 1 NC_022648.1 laccase; copper-stimulated phenoloxidase and ferroxidase which may be involved in copper detoxification; Derived by automated computational analysis using gene prediction method: Protein Homology.; multicopper oxidase 151727 17428957 P423_00660 Escherichia coli JJ1886 multicopper oxidase YP_008720207.1 150177 D 1355100 CDS YP_008720208.1 556550354 17428958 complement(151774..154164) 1 NC_022648.1 quinoprotein glucose dehydrogenase; catalyzes the formation of D-glucono-1,5-lactone from D-glucose and ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose dehydrogenase 154164 17428958 P423_00665 Escherichia coli JJ1886 glucose dehydrogenase YP_008720208.1 151774 R 1355100 CDS YP_008720209.1 556550355 17428959 154370..154906 1 NC_022648.1 catalyzes the formation of inosine monophosphate from hypoxanthine and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypoxanthine phosphoribosyltransferase 154906 17428959 P423_00670 Escherichia coli JJ1886 hypoxanthine phosphoribosyltransferase YP_008720209.1 154370 D 1355100 CDS YP_008720210.1 556550356 17428960 complement(154947..155609) 1 NC_022648.1 catalyzes the interconversion of bicarbonate and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbonic anhydrase 155609 17428960 P423_00675 Escherichia coli JJ1886 carbonic anhydrase YP_008720210.1 154947 R 1355100 CDS YP_008720211.1 556550357 17428961 155718..156644 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 156644 17428961 P423_00680 Escherichia coli JJ1886 multidrug ABC transporter ATP-binding protein YP_008720211.1 155718 D 1355100 CDS YP_008720212.1 556550358 17428962 156641..157411 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 157411 17428962 P423_00685 Escherichia coli JJ1886 membrane protein YP_008720212.1 156641 D 1355100 CDS YP_008720213.1 556550359 17428963 157516..157956 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter subunit IIA 157956 17428963 P423_00690 Escherichia coli JJ1886 PTS sugar transporter subunit IIA YP_008720213.1 157516 D 1355100 CDS YP_008720214.1 556550360 17428964 158020..159249 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 159249 17428964 P423_00695 Escherichia coli JJ1886 hypothetical protein YP_008720214.1 158020 D 1355100 CDS YP_008720215.1 556550361 17428965 complement(159253..159633) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate decarboxylase 159633 17428965 P423_00700 Escherichia coli JJ1886 aspartate decarboxylase YP_008720215.1 159253 R 1355100 CDS YP_008720216.1 556550362 17428966 159907..160827 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 160827 17428966 P423_00705 Escherichia coli JJ1886 hypothetical protein YP_008720216.1 159907 D 1355100 CDS YP_008720217.1 556554240 17428967 160896..161093 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 161093 17428967 P423_00710 Escherichia coli JJ1886 hypothetical protein YP_008720217.1 160896 D 1355100 CDS YP_008720218.1 556550363 17428968 complement(161175..162026) 1 NC_022648.1 catalyzes the formation of (R)-pantothenate from pantoate and beta-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; pantoate--beta-alanine ligase 162026 panC 17428968 panC Escherichia coli JJ1886 pantoate--beta-alanine ligase YP_008720218.1 161175 R 1355100 CDS YP_008720219.1 556550364 17428969 complement(162038..162832) 1 NC_022648.1 catalyzes the formation of tetrahydrofolate and 2-dehydropantoate from 5,10-methylenetetrahydrofolate and 3-methyl-2-oxobutanoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-methyl-2-oxobutanoate hydroxymethyltransferase 162832 panB 17428969 panB Escherichia coli JJ1886 3-methyl-2-oxobutanoate hydroxymethyltransferase YP_008720219.1 162038 R 1355100 CDS YP_008720220.1 556554241 17428970 complement(162945..163892) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial protein 163892 17428970 P423_00725 Escherichia coli JJ1886 fimbrial protein YP_008720220.1 162945 R 1355100 CDS YP_008720221.1 556550365 17428971 complement(164250..164846) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 164846 17428971 P423_00730 Escherichia coli JJ1886 fimbrial protein YP_008720221.1 164250 R 1355100 CDS YP_008720222.1 556550366 17428972 complement(164873..165475) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 165475 17428972 P423_00735 Escherichia coli JJ1886 fimbrial protein YP_008720222.1 164873 R 1355100 CDS YP_008720223.1 556550367 17428973 complement(165490..166062) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein StaD 166062 17428973 P423_00740 Escherichia coli JJ1886 fimbrial protein StaD YP_008720223.1 165490 R 1355100 CDS YP_008720224.1 556550368 17428974 complement(166079..168679) 1 NC_022648.1 similar to the fimbrial usher protein PapC; Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 168679 17428974 P423_00745 Escherichia coli JJ1886 fimbrial protein YP_008720224.1 166079 R 1355100 CDS YP_008720225.1 556550369 17428975 complement(168714..169454) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone protein EcpD 169454 17428975 P423_00750 Escherichia coli JJ1886 chaperone protein EcpD YP_008720225.1 168714 R 1355100 CDS YP_008720226.1 556550370 17428976 complement(169551..170135) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 170135 17428976 P423_00755 Escherichia coli JJ1886 fimbrial protein YP_008720226.1 169551 R 1355100 CDS YP_008720227.1 556550371 17428977 complement(170483..170962) 1 NC_022648.1 catalyzes the formation of 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 170962 17428977 P423_00760 Escherichia coli JJ1886 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase YP_008720227.1 170483 R 1355100 CDS YP_008720228.1 556554242 17428978 complement(170959..172272) 1 NC_022648.1 Polymerase that creates the 3' poly(A) tail found in some mRNA's; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; poly(A) polymerase I 172272 pcnB 17428978 pcnB Escherichia coli JJ1886 poly(A) polymerase I YP_008720228.1 170959 R 1355100 CDS YP_008720229.1 556550372 17428979 complement(172416..173342) 1 NC_022648.1 this tRNA synthetase lacks the tRNA anticodon interaction domain; instead this enzyme modifies tRNA(Asp) with glutamate by esterifying glutamate to the 2-amino-5-(4,5-dihydroxy-2-cyclopenten-1-yl) moiety of queosine generating a modified nucleoside at the first anticodon position of tRNAAsp; the modified tRNA does not bind elongation factor Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamyl-Q tRNA(Asp) ligase 173342 17428979 P423_00770 Escherichia coli JJ1886 glutamyl-Q tRNA(Asp) ligase YP_008720229.1 172416 R 1355100 CDS YP_008720230.1 556550373 17428980 complement(173379..173834) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 173834 dksA 17428980 dksA Escherichia coli JJ1886 transcriptional regulator YP_008720230.1 173379 R 1355100 CDS YP_008720231.1 556550374 17428981 complement(174012..174716) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 174716 17428981 P423_00780 Escherichia coli JJ1886 transcriptional regulator YP_008720231.1 174012 R 1355100 CDS YP_008720232.1 556550375 17428982 complement(174731..175261) 1 NC_022648.1 catalyzes the ligation and cleavage of of 2'-5' linkages in RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2'-5' RNA ligase 175261 17428982 P423_00785 Escherichia coli JJ1886 2'-5' RNA ligase YP_008720232.1 174731 R 1355100 CDS YP_008720233.1 556550376 17428983 175335..177764 1 NC_022648.1 similar in sequence to the ATP-dependent RNA helicase HrpA; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 177764 17428983 P423_00790 Escherichia coli JJ1886 RNA helicase YP_008720233.1 175335 D 1355100 CDS YP_008720234.1 556550377 17428984 177858..180383 1 NC_022648.1 penicillin-binding protein 1b; contains transglycosylase and transpeptidase activity; major enzyme for peptidoglycan biosynthesis in Escherichia coli; transmembrane protein; forms dimers; three variants, one of which may be a degradation product, while the other appears to result from an alternative initiation site, are found within the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glycosyl transferase/transpeptidase 180383 mrcB 17428984 mrcB Escherichia coli JJ1886 bifunctional glycosyl transferase/transpeptidase YP_008720234.1 177858 D 1355100 CDS YP_008720235.1 556554243 17428985 180724..181290 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial family protein 181290 17428985 P423_00800 Escherichia coli JJ1886 fimbrial family protein YP_008720235.1 180724 D 1355100 CDS YP_008720236.1 556550378 17428986 181336..182052 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone FimC 182052 17428986 P423_00805 Escherichia coli JJ1886 molecular chaperone FimC YP_008720236.1 181336 D 1355100 CDS YP_008720237.1 556550379 17428987 182119..184596 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 184596 17428987 P423_00810 Escherichia coli JJ1886 membrane protein YP_008720237.1 182119 D 1355100 CDS YP_008720238.1 556554244 17428988 184753..185628 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fimbrial protein 185628 17428988 P423_00815 Escherichia coli JJ1886 fimbrial protein YP_008720238.1 184753 D 1355100 CDS YP_008720239.1 556550380 17428989 185848..188097 1 NC_022648.1 involved with the transport of ferrichrome across the outer membrane; binds the ferrichrome-iron ligand and interacts with the TonB protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferrichrome outer membrane transporter 188097 17428989 P423_00820 Escherichia coli JJ1886 ferrichrome outer membrane transporter YP_008720239.1 185848 D 1355100 CDS YP_008720240.1 556554245 17428990 188149..188946 1 NC_022648.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron-hydroxamate transporter ATP-binding protein 188946 17428990 P423_00825 Escherichia coli JJ1886 iron-hydroxamate transporter ATP-binding protein YP_008720240.1 188149 D 1355100 CDS YP_008720241.1 556550381 17428991 188946..189836 1 NC_022648.1 Part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter; binds to all hydroxamate siderophores; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-hydroxamate transporter substrate-binding subunit 189836 17428991 P423_00830 Escherichia coli JJ1886 iron-hydroxamate transporter substrate-binding subunit YP_008720241.1 188946 D 1355100 CDS YP_008720242.1 556550382 17428992 189833..191815 1 NC_022648.1 part of the FhuBCD ATP-dependent iron (III) hydroxamate transporter involved in the high-affinity transport of Fe(3+)-ferrichrome; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-hydroxamate transporter permease subunit 191815 17428992 P423_00835 Escherichia coli JJ1886 iron-hydroxamate transporter permease subunit YP_008720242.1 189833 D 1355100 CDS YP_008720243.1 556550383 17428993 complement(191850..193130) 1 NC_022648.1 Converts (S)-4-amino-5-oxopentanoate to 5-aminolevulinate during the porphyrin biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate-1-semialdehyde aminotransferase 193130 17428993 P423_00840 Escherichia coli JJ1886 glutamate-1-semialdehyde aminotransferase YP_008720243.1 191850 R 1355100 CDS YP_008720244.1 556550384 17428994 193355..194776 1 NC_022648.1 Acts as an electrical shunt for an outwardly-directed proton pump that is linked to amino acid decarboxylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; chloride channel protein 194776 17428994 P423_00845 Escherichia coli JJ1886 chloride channel protein YP_008720244.1 193355 D 1355100 CDS YP_008720245.1 556550385 17428995 194858..195202 1 NC_022648.1 essential respiratory protein A; may be involved in the transfer of iron-sulfur clusters; essential for growth using oxygen or alternate electron acceptors; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster insertion protein ErpA 195202 17428995 P423_00850 Escherichia coli JJ1886 iron-sulfur cluster insertion protein ErpA YP_008720245.1 194858 D 1355100 CDS YP_008720246.1 556550386 17428996 complement(195249..195872) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 195872 17428996 P423_00855 Escherichia coli JJ1886 hypothetical protein YP_008720246.1 195249 R 1355100 CDS YP_008720247.1 556550387 17428997 complement(195910..196710) 1 NC_022648.1 solute binding component of the vitamin B12 transport system BtuCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.; vitamin B12 transporter 196710 17428997 P423_00860 Escherichia coli JJ1886 vitamin B12 transporter YP_008720247.1 195910 R 1355100 CDS YP_008720248.1 556550388 17428998 complement(196703..197401) 1 NC_022648.1 enables the cleavage of the glycosidic bond in both 5'-methylthioadenosine and S-adenosylhomocysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 197401 17428998 P423_00865 Escherichia coli JJ1886 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase YP_008720248.1 196703 R 1355100 CDS YP_008720249.1 556550389 17428999 197485..199002 1 NC_022648.1 forms a homotetramer; requires magnesium for activity; catalyzes the hydrolysis of dGTP to form deoxyguanosine and triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyguanosinetriphosphate triphosphohydrolase 199002 dgt 17428999 dgt Escherichia coli JJ1886 deoxyguanosinetriphosphate triphosphohydrolase YP_008720249.1 197485 D 1355100 CDS YP_008720250.1 556550390 17429000 199132..200556 1 NC_022648.1 protease Do; required at high temperature; degrades damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine endoprotease 200556 17429000 P423_00875 Escherichia coli JJ1886 serine endoprotease YP_008720250.1 199132 D 1355100 CDS YP_008720251.1 556550391 17429001 200711..201868 1 NC_022648.1 regulates the expression of the operons for the enzymes involved in galactarate, glucarate and glycerate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; CdaR family transcriptional regulator 201868 17429001 P423_00880 Escherichia coli JJ1886 CdaR family transcriptional regulator YP_008720251.1 200711 D 1355100 CDS YP_008720252.1 556550392 17429002 complement(201922..202308) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 202308 17429002 P423_00885 Escherichia coli JJ1886 hypothetical protein YP_008720252.1 201922 R 1355100 CDS YP_008720253.1 556550393 17429003 complement(202618..203442) 1 NC_022648.1 catalyzes the formation of N-succinyl-2-amino-6-ketopimelate from succinyl-CoA and tetrahydrodipicolinate in the lysine biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase 203442 dapD 17429003 dapD Escherichia coli JJ1886 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase YP_008720253.1 202618 R 1355100 CDS YP_008720254.1 556550394 17429004 complement(203473..206145) 1 NC_022648.1 catalyzes the uridylylation or deuridylylation of the PII nitrogen regulatory protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PII uridylyl-transferase 206145 17429004 P423_00895 Escherichia coli JJ1886 PII uridylyl-transferase YP_008720254.1 203473 R 1355100 CDS YP_008720255.1 556550395 17429005 complement(206207..207001) 1 NC_022648.1 catalyzes the removal of N-terminal amino acids from peptides and arylamides; generally Co(II) however activity has been shown for some methionine aminopeptidases with Zn, Fe, or Mn; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine aminopeptidase 207001 17429005 P423_00900 Escherichia coli JJ1886 methionine aminopeptidase YP_008720255.1 206207 R 1355100 CDS YP_008720256.1 556550396 17429006 207171..208094 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S2 208094 17429006 P423_00905 Escherichia coli JJ1886 30S ribosomal protein S2 YP_008720256.1 207171 D 1355100 CDS YP_008720257.1 556550397 17429007 208229..209080 1 NC_022648.1 EF-Ts; functions during elongation stage of protein translation; forms a dimer; associates with EF-Tu-GDP complex and promotes exchange of GDP to GTP resulting in regeneration of the active form of EF-Tu; Derived by automated computational analysis using gene prediction method: Protein Homology.; endo-1,4-D-glucanase 209080 tsf 17429007 tsf Escherichia coli JJ1886 endo-1,4-D-glucanase YP_008720257.1 208229 D 1355100 CDS YP_008720258.1 556550398 17429008 209227..209952 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uridylate kinase 209952 17429008 P423_00915 Escherichia coli JJ1886 uridylate kinase YP_008720258.1 209227 D 1355100 CDS YP_008720259.1 556550399 17429009 210102..210659 1 NC_022648.1 Rrf; Frr; ribosome-recycling factor; release factor 4; RF4; recycles ribosomes upon translation termination along with release factor RF-3 and elongation factor EF-G; A GTPase-dependent process results in release of 50S from 70S; inhibited by release factor RF-1; essential for viability; structurally similar to tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome recycling factor 210659 frr 17429009 frr Escherichia coli JJ1886 ribosome recycling factor YP_008720259.1 210102 D 1355100 CDS YP_008720260.1 556550400 17429010 210751..211947 1 NC_022648.1 catalyzes the formation of 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose-5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-deoxy-D-xylulose 5-phosphate reductoisomerase 211947 17429010 P423_00925 Escherichia coli JJ1886 1-deoxy-D-xylulose 5-phosphate reductoisomerase YP_008720260.1 210751 D 1355100 CDS YP_008720261.1 556550401 17429011 212133..212894 1 NC_022648.1 catalyzes the formation of undecaprenyl pyrophosphate from isopentenyl pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP pyrophosphate synthase 212894 17429011 P423_00930 Escherichia coli JJ1886 UDP pyrophosphate synthase YP_008720261.1 212133 D 1355100 CDS YP_008720262.1 556550402 17429012 212907..213764 1 NC_022648.1 catalyzes the synthesis of CDP-diglyceride from CTP and phosphatidate; Derived by automated computational analysis using gene prediction method: Protein Homology.; CDP-diglyceride synthase 213764 cdsA 17429012 cdsA Escherichia coli JJ1886 CDP-diglyceride synthase YP_008720262.1 212907 D 1355100 CDS YP_008720263.1 556550403 17429013 213776..215128 1 NC_022648.1 catalyzes the cleavage of RseA which activates the sigmaE-mediated stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc metallopeptidase RseP 215128 17429013 P423_00940 Escherichia coli JJ1886 zinc metallopeptidase RseP YP_008720263.1 213776 D 1355100 CDS YP_008720264.1 556550404 17429014 215158..217590 1 NC_022648.1 part of a complex with YfgL, YfiO, and NlpB involved in outer membrane protein biosynthesis; involved in the assembly of outer membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane protein assembly factor YaeT 217590 17429014 P423_00945 Escherichia coli JJ1886 outer membrane protein assembly factor YaeT YP_008720264.1 215158 D 1355100 CDS YP_008720265.1 556550405 17429015 217712..218197 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone 218197 17429015 P423_00950 Escherichia coli JJ1886 chaperone YP_008720265.1 217712 D 1355100 CDS YP_008720266.1 556550406 17429016 218201..219226 1 NC_022648.1 adds the O-linked and N-linked 3(R)-hydroxy fatty acids to the glucosamine disaccharide during lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase 219226 lpxD 17429016 lpxD Escherichia coli JJ1886 UDP-3-O-(3-hydroxymyristoyl) glucosamine N-acyltransferase YP_008720266.1 218201 D 1355100 CDS YP_008720267.1 556550407 17429017 219331..219786 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxymyristoyl-ACP dehydratase 219786 17429017 P423_00960 Escherichia coli JJ1886 hydroxymyristoyl-ACP dehydratase YP_008720267.1 219331 D 1355100 CDS YP_008720268.1 556550408 17429018 219790..220578 1 NC_022648.1 catalyzes the addition of (R)-3-hydroxytetradecanoyl to the glucosamine disaccharide in lipid A biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylglucosamine acyltransferase 220578 17429018 P423_00965 Escherichia coli JJ1886 UDP-N-acetylglucosamine acyltransferase YP_008720268.1 219790 D 1355100 CDS YP_008720269.1 556550409 17429019 220578..221726 1 NC_022648.1 catalyzes the formation of lipid A disaccharide from UDP-2,3-diacylglucosamine and 2,3-diacylglucosamine-1-phosphate, lipid A disaccharide is a precursor of lipid A that anchors LPS to the OM; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid-A-disaccharide synthase 221726 lpxB 17429019 lpxB Escherichia coli JJ1886 lipid-A-disaccharide synthase YP_008720269.1 220578 D 1355100 CDS YP_008720270.1 556550410 17429020 221723..222319 1 NC_022648.1 RNH2; RNase HII; binds manganese; endonuclease which specifically degrades the RNA of RNA-DNA hybrids; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease HII 222319 rnhB 17429020 rnhB Escherichia coli JJ1886 ribonuclease HII YP_008720270.1 221723 D 1355100 CDS YP_008720271.1 556550411 17429021 222356..225838 1 NC_022648.1 catalyzes DNA-template-directed extension of the 3'- end of a DNA strand by one nucleotide at a time; main replicative polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit alpha 225838 dnaE 17429021 dnaE Escherichia coli JJ1886 DNA polymerase III subunit alpha YP_008720271.1 222356 D 1355100 CDS YP_008720272.1 556550412 17429022 225851..226810 1 NC_022648.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer composed of two alpha (AccA) and two beta (AccD) subunits; one of the two catalytic subunits that can form the acetyl CoA carboxylase enzyme together with a carrier protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase subunit alpha 226810 17429022 P423_00985 Escherichia coli JJ1886 acetyl-CoA carboxylase subunit alpha YP_008720272.1 225851 D 1355100 CDS YP_008720273.1 556550413 17429023 226908..229049 1 NC_022648.1 constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine decarboxylase CadA 229049 17429023 P423_00990 Escherichia coli JJ1886 lysine decarboxylase CadA YP_008720273.1 226908 D 1355100 CDS YP_008720274.1 556550414 17429024 229106..229495 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lyase 229495 17429024 P423_00995 Escherichia coli JJ1886 lyase YP_008720274.1 229106 D 1355100 CDS YP_008720275.1 556550415 17429025 229560..230873 1 NC_022648.1 Ligates lysine onto the cytidine present at position 34 of the AUA codon-specific tRNA(Ile) that contains the anticodon CAU; ATP-dependent; responsible for modifying the wobble-base of the CAU anticodon of tRNAIle such that it exhibits proper recognition of the AUA codon rather than the AUG codon and is in turn properly recognized by isoleucyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA(Ile)-lysidine ligase 230873 tilS 17429025 tilS Escherichia coli JJ1886 tRNA(Ile)-lysidine ligase YP_008720275.1 229560 D 1355100 CDS YP_008720276.1 556550416 17429026 complement(230907..231167) 1 NC_022648.1 Suppresses temperature-sensitive mutations in essential genes by modulating rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.; Rho-binding antiterminator 231167 17429026 P423_01005 Escherichia coli JJ1886 Rho-binding antiterminator YP_008720276.1 230907 R 1355100 CDS YP_008720277.1 556550417 17429027 complement(231154..231354) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 231354 17429027 P423_01010 Escherichia coli JJ1886 hypothetical protein YP_008720277.1 231154 R 1355100 CDS YP_008720278.1 556550418 17429028 231520..232065 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 232065 17429028 P423_01015 Escherichia coli JJ1886 hypothetical protein YP_008720278.1 231520 D 1355100 CDS YP_008720279.1 556550419 17429029 232062..232484 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 232484 17429029 P423_01020 Escherichia coli JJ1886 hypothetical protein YP_008720279.1 232062 D 1355100 CDS YP_008720280.1 556550420 17429030 232498..233208 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein involved with copper homeostasis and adhesion 233208 17429030 P423_01025 Escherichia coli JJ1886 lipoprotein involved with copper homeostasis and adhesion YP_008720280.1 232498 D 1355100 CDS YP_008720281.1 556550421 17429032 complement(233364..234188) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 234188 17429032 P423_01035 Escherichia coli JJ1886 hypothetical protein YP_008720281.1 233364 R 1355100 CDS YP_008720282.1 556550422 17429033 complement(234241..235959) 1 NC_022648.1 catalyzes the formation of prolyl-tRNA(Pro) from proline and tRNA(Pro); Derived by automated computational analysis using gene prediction method: Protein Homology.; prolyl-tRNA synthetase 235959 17429033 P423_01040 Escherichia coli JJ1886 prolyl-tRNA synthetase YP_008720282.1 234241 R 1355100 CDS YP_008720283.1 556550423 17429034 complement(236070..236777) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 236777 17429034 P423_01045 Escherichia coli JJ1886 hypothetical protein YP_008720283.1 236070 R 1355100 CDS YP_008720284.1 556550424 17429035 complement(236774..237178) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein 237178 rcsF 17429035 rcsF Escherichia coli JJ1886 outer membrane lipoprotein YP_008720284.1 236774 R 1355100 CDS YP_008720285.1 556550425 17429036 complement(237296..238111) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine ABC transporter substrate-binding protein 238111 metQ 17429036 metQ Escherichia coli JJ1886 methionine ABC transporter substrate-binding protein YP_008720285.1 237296 R 1355100 CDS YP_008720286.1 556550426 17429037 complement(238151..238804) 1 NC_022648.1 part of the MetNIQ methionine uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine ABC transporter permease 238804 17429037 P423_01060 Escherichia coli JJ1886 methionine ABC transporter permease YP_008720286.1 238151 R 1355100 CDS YP_008720287.1 556550427 17429038 complement(238797..239828) 1 NC_022648.1 similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter ATP-binding protein 239828 glnQ 17429038 glnQ Escherichia coli JJ1886 glutamine ABC transporter ATP-binding protein YP_008720287.1 238797 R 1355100 CDS YP_008720288.1 556550428 17429039 240016..240588 1 NC_022648.1 Converts the D-glycero-beta-D-manno-heptose 1,7-bisphosphate intermediate into D-glycero-beta-D-manno-heptose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; D,D-heptose 1,7-bisphosphate phosphatase 240588 17429039 P423_01070 Escherichia coli JJ1886 D,D-heptose 1,7-bisphosphate phosphatase YP_008720288.1 240016 D 1355100 CDS YP_008720289.1 556550429 17429046 246355..247158 1 NC_022648.1 catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 247158 dkgB 17429046 dkgB Escherichia coli JJ1886 2,5-diketo-D-gluconic acid reductase YP_008720289.1 246355 D 1355100 CDS YP_008720290.1 556550430 17429047 complement(247155..248069) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 248069 17429047 P423_01110 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008720290.1 247155 R 1355100 CDS YP_008720291.1 556550431 17429048 248310..249110 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 249110 17429048 P423_01115 Escherichia coli JJ1886 hypothetical protein YP_008720291.1 248310 D 1355100 CDS YP_008720292.1 556550432 17429049 249188..249958 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB 249958 17429049 P423_01120 Escherichia coli JJ1886 S-adenosyl-L-methionine (SAM)-dependent methyltransferase PhcB YP_008720292.1 249188 D 1355100 CDS YP_008720293.1 556550433 17429050 complement(250007..251365) 1 NC_022648.1 catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; may play a role in recycling muropeptides during cell division and/or cell elongation; in Helicobacter pylori MltD is a endolytic transglycosylase involved mainly in the rearrangement of the peptidoglycan layer of the bacterial cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 251365 mltD 17429050 mltD Escherichia coli JJ1886 membrane protein YP_008720293.1 250007 R 1355100 CDS YP_008720294.1 556550434 17429051 complement(251437..252192) 1 NC_022648.1 catalyzes the hydrolysis of S-D-lactoylglutathione to D-lactic acid and reduced glutathione; plays an important role in cellular detoxification using glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyacylglutathione hydrolase 252192 17429051 P423_01130 Escherichia coli JJ1886 hydroxyacylglutathione hydrolase YP_008720294.1 251437 R 1355100 CDS YP_008720295.1 556550435 17429052 252226..252948 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 252948 17429052 P423_01135 Escherichia coli JJ1886 hypothetical protein YP_008720295.1 252226 D 1355100 CDS YP_008720296.1 556550436 17429053 complement(252945..253412) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease H 253412 17429053 P423_01140 Escherichia coli JJ1886 ribonuclease H YP_008720296.1 252945 R 1355100 CDS YP_008720297.1 556550437 17429054 253468..254208 1 NC_022648.1 3'-5' exonuclease of DNA polymerase III; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit epsilon 254208 17429054 P423_01145 Escherichia coli JJ1886 DNA polymerase III subunit epsilon YP_008720297.1 253468 D 1355100 CDS YP_008720298.1 556550438 17429056 complement(254516..255286) 1 NC_022648.1 NAD(P)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; C-N hydrolase family amidase 255286 17429056 P423_01155 Escherichia coli JJ1886 C-N hydrolase family amidase YP_008720298.1 254516 R 1355100 CDS YP_008720299.1 556550439 17429057 255440..255913 1 NC_022648.1 inactivates vertebrate C-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; C-lysozyme inhibitor 255913 17429057 P423_01160 Escherichia coli JJ1886 C-lysozyme inhibitor YP_008720299.1 255440 D 1355100 CDS YP_008720300.1 556550440 17429058 complement(255956..258400) 1 NC_022648.1 functions in fatty acid oxidation; converts acyl-CoA and FAD to FADH2 and delta2-enoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA dehydrogenase 258400 fadE 17429058 fadE Escherichia coli JJ1886 acyl-CoA dehydrogenase YP_008720300.1 255956 R 1355100 CDS YP_008720301.1 556550441 17429059 258640..259218 1 NC_022648.1 catalyzes the isomerization of sedoheptulose 7-phosphate to D-glycero-D-manno-heptose 7-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoheptose isomerase 259218 gmhA 17429059 gmhA Escherichia coli JJ1886 phosphoheptose isomerase YP_008720301.1 258640 D 1355100 CDS YP_008720302.1 556550442 17429060 259423..260190 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine amidotransferase 260190 17429060 P423_01175 Escherichia coli JJ1886 glutamine amidotransferase YP_008720302.1 259423 D 1355100 CDS YP_008720303.1 556550443 17429061 complement(260161..260901) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transpeptidase 260901 17429061 P423_01180 Escherichia coli JJ1886 transpeptidase YP_008720303.1 260161 R 1355100 CDS YP_008720304.1 556550444 17429062 261213..261962 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 261962 17429062 P423_01185 Escherichia coli JJ1886 endopeptidase YP_008720304.1 261213 D 1355100 CDS YP_008720305.1 556550445 17429063 262138..262635 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 262635 17429063 P423_01190 Escherichia coli JJ1886 hypothetical protein YP_008720305.1 262138 D 1355100 CDS YP_008720306.1 556550446 17429064 complement(262855..264948) 1 NC_022648.1 membrane protein involved in the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FlhA 264948 flhA 17429064 flhA Escherichia coli JJ1886 flagellar biosynthesis protein FlhA YP_008720306.1 262855 R 1355100 CDS YP_008720307.1 556554246 17429065 complement(264932..266071) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar biosynthesis protein FlhB 266071 17429065 P423_01200 Escherichia coli JJ1886 flagellar biosynthesis protein FlhB YP_008720307.1 264932 R 1355100 CDS YP_008720308.1 556554247 17429066 complement(266061..266843) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar biosynthesis protein FliR 266843 17429066 P423_01205 Escherichia coli JJ1886 flagellar biosynthesis protein FliR YP_008720308.1 266061 R 1355100 CDS YP_008720309.1 556550447 17429067 complement(266845..267117) 1 NC_022648.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliQ 267117 fliQ 17429067 fliQ Escherichia coli JJ1886 flagellar biosynthesis protein FliQ YP_008720309.1 266845 R 1355100 CDS YP_008720310.1 556550448 17429068 complement(267120..267872) 1 NC_022648.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliP 267872 fliP 17429068 fliP Escherichia coli JJ1886 flagellar biosynthesis protein FliP YP_008720310.1 267120 R 1355100 CDS YP_008720311.1 556554248 17429069 complement(267869..268240) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 268240 17429069 P423_01220 Escherichia coli JJ1886 hypothetical protein YP_008720311.1 267869 R 1355100 CDS YP_008720312.1 556554249 17429070 complement(268233..269084) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 269084 17429070 P423_01225 Escherichia coli JJ1886 hypothetical protein YP_008720312.1 268233 R 1355100 CDS YP_008720313.1 556550449 17429071 269471..270457 1 NC_022648.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 270457 pspF 17429071 pspF Escherichia coli JJ1886 transcriptional regulator YP_008720313.1 269471 D 1355100 CDS YP_008720314.1 556554250 17429072 270472..270813 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook-basal body protein FliE 270813 17429072 P423_01235 Escherichia coli JJ1886 flagellar hook-basal body protein FliE YP_008720314.1 270472 D 1355100 CDS YP_008720315.1 556554251 17429073 270818..272464 1 NC_022648.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; the Vibrio parahaemolyticus protein is associated with the lateral flagella; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar M-ring protein FliF 272464 fliF 17429073 fliF Escherichia coli JJ1886 flagellar M-ring protein FliF YP_008720315.1 270818 D 1355100 CDS YP_008720316.1 556554252 17429074 272442..273452 1 NC_022648.1 One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar motor switch protein FliG 273452 fliG 17429074 fliG Escherichia coli JJ1886 flagellar motor switch protein FliG YP_008720316.1 272442 D 1355100 CDS YP_008720317.1 556554253 17429075 273456..274166 1 NC_022648.1 binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar assembly protein FliH 274166 fliH 17429075 fliH Escherichia coli JJ1886 flagellar assembly protein FliH YP_008720317.1 273456 D 1355100 CDS YP_008720318.1 556550450 17429076 274159..275499 1 NC_022648.1 involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP synthase 275499 fliI 17429076 fliI Escherichia coli JJ1886 ATP synthase YP_008720318.1 274159 D 1355100 CDS YP_008720319.1 556554254 17429077 275502..275936 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar export protein FliJ 275936 17429077 P423_01260 Escherichia coli JJ1886 flagellar export protein FliJ YP_008720319.1 275502 D 1355100 CDS YP_008720320.1 556554255 17429078 275939..276334 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycerol-3-phosphate cytidylyltransferase 276334 17429078 P423_01265 Escherichia coli JJ1886 glycerol-3-phosphate cytidylyltransferase YP_008720320.1 275939 D 1355100 CDS YP_008720321.1 556554256 17429079 complement(276354..276701) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 276701 17429079 P423_01270 Escherichia coli JJ1886 hypothetical protein YP_008720321.1 276354 R 1355100 CDS YP_008720322.1 556554257 17429080 complement(276789..277286) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 277286 17429080 P423_01275 Escherichia coli JJ1886 hypothetical protein YP_008720322.1 276789 R 1355100 CDS YP_008720323.1 556554258 17429081 complement(279245..281683) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase 281683 17429081 P423_01280 Escherichia coli JJ1886 glycosyl transferase YP_008720323.1 279245 R 1355100 CDS YP_008720324.1 556554259 17429082 complement(281730..282662) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysine-N-methylase 282662 17429082 P423_01285 Escherichia coli JJ1886 lysine-N-methylase YP_008720324.1 281730 R 1355100 CDS YP_008720325.1 556554260 17429083 complement(282790..283218) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lateral flagellar chaperone protein 283218 17429083 P423_01290 Escherichia coli JJ1886 lateral flagellar chaperone protein YP_008720325.1 282790 R 1355100 CDS YP_008720326.1 556554261 17429084 complement(283231..283509) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; anti-sigma-28 factor FlgM 283509 17429084 P423_01295 Escherichia coli JJ1886 anti-sigma-28 factor FlgM YP_008720326.1 283231 R 1355100 CDS YP_008720327.1 556554262 17429085 complement(283591..284328) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagella basal body P-ring formation protein FlgA 284328 17429085 P423_01300 Escherichia coli JJ1886 flagella basal body P-ring formation protein FlgA YP_008720327.1 283591 R 1355100 CDS YP_008720328.1 556550451 17429086 284410..284745 1 NC_022648.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgB 284745 flgB 17429086 flgB Escherichia coli JJ1886 flagellar basal body rod protein FlgB YP_008720328.1 284410 D 1355100 CDS YP_008720329.1 556550452 17429087 284748..285179 1 NC_022648.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgC 285179 flgC 17429087 flgC Escherichia coli JJ1886 flagellar basal body rod protein FlgC YP_008720329.1 284748 D 1355100 CDS YP_008720330.1 556554263 17429088 285179..285892 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook capping protein 285892 17429088 P423_01315 Escherichia coli JJ1886 flagellar hook capping protein YP_008720330.1 285179 D 1355100 CDS YP_008720331.1 556554264 17429089 286011..286151 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 286151 17429089 P423_01320 Escherichia coli JJ1886 hypothetical protein YP_008720331.1 286011 D 1355100 CDS YP_008720332.1 556554265 17429090 286164..287366 1 NC_022648.1 the hook connects flagellar basal body to the flagellar filament; Vibrio parahaemolyticus protein is associated with the lateral flagella; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook protein FlgE 287366 flgE 17429090 flgE Escherichia coli JJ1886 flagellar hook protein FlgE YP_008720332.1 286164 D 1355100 CDS YP_008720333.1 556554266 17429091 287366..288103 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar basal body rod protein FlgF 288103 17429091 P423_01330 Escherichia coli JJ1886 flagellar basal body rod protein FlgF YP_008720333.1 287366 D 1355100 CDS YP_008720334.1 556550453 17429092 288182..288967 1 NC_022648.1 makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgG 288967 flgG 17429092 flgG Escherichia coli JJ1886 flagellar basal body rod protein FlgG YP_008720334.1 288182 D 1355100 CDS YP_008720335.1 556554267 17429093 289050..289715 1 NC_022648.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; the Yersinia have 2 copies of flgH; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar basal body L-ring protein 289715 flgH 17429093 flgH Escherichia coli JJ1886 flagellar basal body L-ring protein YP_008720335.1 289050 D 1355100 CDS YP_008720336.1 556550454 17429094 289730..290830 1 NC_022648.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body P-ring protein 290830 flgI 17429094 flgI Escherichia coli JJ1886 flagellar basal body P-ring protein YP_008720336.1 289730 D 1355100 CDS YP_008720337.1 556554268 17429095 290830..291129 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rod binding protein 291129 17429095 P423_01350 Escherichia coli JJ1886 rod binding protein YP_008720337.1 290830 D 1355100 CDS YP_008720338.1 556554269 17429096 291319..292695 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook-associated protein FlgK 292695 17429096 P423_01355 Escherichia coli JJ1886 flagellar hook-associated protein FlgK YP_008720338.1 291319 D 1355100 CDS YP_008720339.1 556554270 17429097 292710..293639 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook protein 293639 17429097 P423_01360 Escherichia coli JJ1886 flagellar hook protein YP_008720339.1 292710 D 1355100 CDS YP_008720340.1 556554271 17429098 293656..294633 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lateral flagellar hook associated protein 294633 17429098 P423_01365 Escherichia coli JJ1886 lateral flagellar hook associated protein YP_008720340.1 293656 D 1355100 CDS YP_008720341.1 556554272 17429099 complement(294692..295534) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; CadC family transcriptional regulator 295534 17429099 P423_01370 Escherichia coli JJ1886 CadC family transcriptional regulator YP_008720341.1 294692 R 1355100 CDS YP_008720342.1 556554273 17429100 296020..296934 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellin 296934 17429100 P423_01375 Escherichia coli JJ1886 flagellin YP_008720342.1 296020 D 1355100 CDS YP_008720343.1 556554274 17429101 297344..298660 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook protein 298660 17429101 P423_01380 Escherichia coli JJ1886 flagellar hook protein YP_008720343.1 297344 D 1355100 CDS YP_008720344.1 556554275 17429102 298683..299075 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar biosynthesis protein FliS 299075 17429102 P423_01385 Escherichia coli JJ1886 flagellar biosynthesis protein FliS YP_008720344.1 298683 D 1355100 CDS YP_008720345.1 556554276 17429103 299080..299391 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lateral flagellar chaperone protein 299391 17429103 P423_01390 Escherichia coli JJ1886 lateral flagellar chaperone protein YP_008720345.1 299080 D 1355100 CDS YP_008720346.1 556554277 17429104 299388..300449 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar hook-length control protein FliK 300449 17429104 P423_01395 Escherichia coli JJ1886 flagellar hook-length control protein FliK YP_008720346.1 299388 D 1355100 CDS YP_008720347.1 556554278 17429105 300457..300924 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar basal body protein FliL 300924 17429105 P423_01400 Escherichia coli JJ1886 flagellar basal body protein FliL YP_008720347.1 300457 D 1355100 CDS YP_008720348.1 556554279 17429106 300944..301660 1 NC_022648.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA polymerase sigma 70 301660 17429106 P423_01405 Escherichia coli JJ1886 RNA polymerase sigma 70 YP_008720348.1 300944 D 1355100 CDS YP_008720349.1 556554280 17429107 301673..302536 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flagellar motor protein MotA 302536 17429107 P423_01410 Escherichia coli JJ1886 flagellar motor protein MotA YP_008720349.1 301673 D 1355100 CDS YP_008720350.1 556550455 17429108 302539..303462 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 303462 17429108 P423_01415 Escherichia coli JJ1886 hypothetical protein YP_008720350.1 302539 D 1355100 CDS YP_008720351.1 556550456 17429109 303533..304588 1 NC_022648.1 involved in translesion DNA polymerization with beta clamp of polymerase III; belongs to Y family of polymerases; does not contain proofreading function; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase IV 304588 17429109 P423_01420 Escherichia coli JJ1886 DNA polymerase IV YP_008720351.1 303533 D 1355100 CDS YP_008720352.1 556550457 17429110 304585..305037 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyltransferase 305037 17429110 P423_01425 Escherichia coli JJ1886 acyltransferase YP_008720352.1 304585 D 1355100 CDS YP_008720353.1 556550458 17429111 305215..306366 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 306366 17429111 P423_01430 Escherichia coli JJ1886 hypothetical protein YP_008720353.1 305215 D 1355100 CDS YP_008720354.1 556550459 17429112 306363..306977 1 NC_022648.1 similar to release factor 1 and 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 306977 prfH 17429112 prfH Escherichia coli JJ1886 peptide chain release factor YP_008720354.1 306363 D 1355100 CDS YP_008720355.1 556550460 17429113 complement(307033..308490) 1 NC_022648.1 catalyzes the hydrolysis of Xaa-His dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacyl-histidine dipeptidase 308490 17429113 P423_01440 Escherichia coli JJ1886 aminoacyl-histidine dipeptidase YP_008720355.1 307033 R 1355100 CDS YP_008720356.1 556550461 17429114 308751..309209 1 NC_022648.1 catalyzes the conversion of guanine, xanthine and, to a lesser extent, hypoxanthine to GMP, XMP and IMP, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine phosphoribosyltransferase 309209 17429114 P423_01445 Escherichia coli JJ1886 xanthine phosphoribosyltransferase YP_008720356.1 308751 D 1355100 CDS YP_008720357.1 556550462 17429115 309301..310545 1 NC_022648.1 forms a 1:1 complex with the unphosphorylated from of enzyme IIAGlc; FrsA may promote fermentation; Derived by automated computational analysis using gene prediction method: Protein Homology.; fermentation/respiration switch protein 310545 frsA 17429115 frsA Escherichia coli JJ1886 fermentation/respiration switch protein YP_008720357.1 309301 D 1355100 CDS YP_008720358.1 556550463 17429116 310603..311004 1 NC_022648.1 involved in the expression of csgBA which is involved in curli formation; interacts with sigmaS; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 311004 17429116 P423_01455 Escherichia coli JJ1886 transcriptional regulator YP_008720358.1 310603 D 1355100 CDS YP_008720359.1 556550464 17429117 complement(311043..312098) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane phosphoporin protein E 312098 17429117 P423_01460 Escherichia coli JJ1886 outer membrane phosphoporin protein E YP_008720359.1 311043 R 1355100 CDS YP_008720360.1 556550465 17429118 312387..313490 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl kinase 313490 17429118 P423_01465 Escherichia coli JJ1886 gamma-glutamyl kinase YP_008720360.1 312387 D 1355100 CDS YP_008720361.1 556550466 17429119 313502..314755 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl phosphate reductase 314755 17429119 P423_01470 Escherichia coli JJ1886 gamma-glutamyl phosphate reductase YP_008720361.1 313502 D 1355100 CDS YP_008720362.1 556554281 17429121 complement(315309..315779) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 315779 17429121 P423_01480 Escherichia coli JJ1886 hypothetical protein YP_008720362.1 315309 R 1355100 CDS YP_008720363.1 556554282 17429122 complement(316122..317369) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 317369 17429122 P423_01485 Escherichia coli JJ1886 hypothetical protein YP_008720363.1 316122 R 1355100 CDS YP_008720364.1 556554283 17429123 complement(317359..318996) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; N-6 DNA methylase 318996 17429123 P423_01490 Escherichia coli JJ1886 N-6 DNA methylase YP_008720364.1 317359 R 1355100 CDS YP_008720365.1 556554284 17429124 complement(318990..322088) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type I restriction enzyme, R subunit 322088 17429124 P423_01495 Escherichia coli JJ1886 type I restriction enzyme, R subunit YP_008720365.1 318990 R 1355100 CDS YP_008720366.1 556554285 17429125 322396..323154 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 323154 17429125 P423_01500 Escherichia coli JJ1886 hypothetical protein YP_008720366.1 322396 D 1355100 CDS YP_008720367.1 556554286 17429126 323141..324061 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 324061 17429126 P423_01505 Escherichia coli JJ1886 hypothetical protein YP_008720367.1 323141 D 1355100 CDS YP_008720368.1 556554287 17429127 complement(324226..325002) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; integrase 325002 17429127 P423_01510 Escherichia coli JJ1886 integrase YP_008720368.1 324226 R 1355100 CDS YP_008720369.1 556554288 17429128 324988..325107 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 325107 17429128 P423_01515 Escherichia coli JJ1886 hypothetical protein YP_008720369.1 324988 D 1355100 CDS YP_008720370.1 556554289 17429129 complement(325210..325545) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 325545 17429129 P423_01520 Escherichia coli JJ1886 hypothetical protein YP_008720370.1 325210 R 1355100 CDS YP_008720371.1 556554290 17429130 325979..326164 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 326164 17429130 P423_01525 Escherichia coli JJ1886 hypothetical protein YP_008720371.1 325979 D 1355100 CDS YP_008720372.1 556550467 17429131 326379..326993 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 326993 17429131 P423_01530 Escherichia coli JJ1886 membrane protein YP_008720372.1 326379 D 1355100 CDS YP_008720373.1 556550468 17429132 complement(327242..327571) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 327571 17429132 P423_01535 Escherichia coli JJ1886 hypothetical protein YP_008720373.1 327242 R 1355100 CDS YP_008720374.1 556550469 17429133 complement(327878..328588) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 328588 17429133 P423_01540 Escherichia coli JJ1886 hypothetical protein YP_008720374.1 327878 R 1355100 CDS YP_008720375.1 556550470 17429134 complement(328557..330200) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 330200 17429134 P423_01545 Escherichia coli JJ1886 hypothetical protein YP_008720375.1 328557 R 1355100 CDS YP_008720376.1 556550471 17429135 complement(330190..332715) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 332715 17429135 P423_01550 Escherichia coli JJ1886 hypothetical protein YP_008720376.1 330190 R 1355100 CDS YP_008720377.1 556550472 17429136 complement(332741..333409) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 333409 17429136 P423_01555 Escherichia coli JJ1886 hypothetical protein YP_008720377.1 332741 R 1355100 CDS YP_008720378.1 556550473 17429137 complement(333466..334053) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrillin MatB 334053 17429137 P423_01560 Escherichia coli JJ1886 fimbrillin MatB YP_008720378.1 333466 R 1355100 CDS YP_008720379.1 556550474 17429138 complement(334128..334718) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 334718 17429138 P423_01565 Escherichia coli JJ1886 LuxR family transcriptional regulator YP_008720379.1 334128 R 1355100 CDS YP_008720380.1 556550475 17429139 complement(335754..335894) 1 NC_022648.1 smallest protein in the large subunit; similar to what is found with protein L31 and L33 several bacterial genomes contain paralogs which may be regulated by zinc; the protein from Thermus thermophilus has a zinc-binding motif and contains a bound zinc ion; the proteins in this group do not have the motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L36 335894 rpmJ 17429139 rpmJ Escherichia coli JJ1886 50S ribosomal protein L36 YP_008720380.1 335754 R 1355100 CDS YP_008720381.1 556550476 17429140 complement(335894..336157) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L31 336157 17429140 P423_01575 Escherichia coli JJ1886 50S ribosomal protein L31 YP_008720381.1 335894 R 1355100 CDS YP_008720382.1 556554291 17429141 complement(336522..336623) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 336623 17429141 P423_01580 Escherichia coli JJ1886 membrane protein YP_008720382.1 336522 R 1355100 CDS YP_008720383.1 556550477 17429142 complement(337096..338238) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH-dependent flavin oxidoreductase 338238 17429142 P423_01585 Escherichia coli JJ1886 NADH-dependent flavin oxidoreductase YP_008720383.1 337096 R 1355100 CDS YP_008720384.1 556550478 17429143 complement(338411..339331) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 339331 17429143 P423_01590 Escherichia coli JJ1886 hypothetical protein YP_008720384.1 338411 R 1355100 CDS YP_008720385.1 556550479 17429144 339491..340414 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 340414 17429144 P423_01595 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008720385.1 339491 D 1355100 CDS YP_008720386.1 556550480 17429145 340614..341507 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 341507 17429145 P423_01600 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008720386.1 340614 D 1355100 CDS YP_008720387.1 556554292 17429146 complement(341538..342527) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; aldo/keto reductase 342527 17429146 P423_01605 Escherichia coli JJ1886 aldo/keto reductase YP_008720387.1 341538 R 1355100 CDS YP_008720388.1 556550481 17429147 complement(342554..343405) 1 NC_022648.1 methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 343405 dkgA 17429147 dkgA Escherichia coli JJ1886 2,5-diketo-D-gluconic acid reductase YP_008720388.1 342554 R 1355100 CDS YP_008720389.1 556550482 17429148 343971..348218 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; invasin 348218 17429148 P423_01615 Escherichia coli JJ1886 invasin YP_008720389.1 343971 D 1355100 CDS YP_008720390.1 556550483 17429149 complement(348343..349200) 1 NC_022648.1 regulates genes involved in response to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 349200 17429149 P423_01620 Escherichia coli JJ1886 transcriptional regulator YP_008720390.1 348343 R 1355100 CDS YP_008720391.1 556550484 17429150 349448..350317 1 NC_022648.1 methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 350317 dkgA 17429150 dkgA Escherichia coli JJ1886 2,5-diketo-D-gluconic acid reductase YP_008720391.1 349448 D 1355100 CDS YP_008720392.1 556550485 17429151 complement(350477..351070) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 351070 17429151 P423_01630 Escherichia coli JJ1886 membrane protein YP_008720392.1 350477 R 1355100 CDS YP_008720393.1 556550486 17429152 complement(351082..351318) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 351318 17429152 P423_01635 Escherichia coli JJ1886 hypothetical protein YP_008720393.1 351082 R 1355100 CDS YP_008720394.1 556550487 17429153 complement(351427..352752) 1 NC_022648.1 Involved in disulfide oxidoreductase activity and electron transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridine nucleotide-disulfide oxidoreductase 352752 17429153 P423_01640 Escherichia coli JJ1886 pyridine nucleotide-disulfide oxidoreductase YP_008720394.1 351427 R 1355100 CDS YP_008720395.1 556550488 17429154 352979..353833 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 353833 17429154 P423_01645 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008720395.1 352979 D 1355100 CDS YP_008720396.1 556550489 17429155 354359..355078 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 355078 17429155 P423_01650 Escherichia coli JJ1886 hypothetical protein YP_008720396.1 354359 D 1355100 CDS YP_008720397.1 556550490 17429156 355089..356516 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid dehydrogenase 356516 17429156 P423_01655 Escherichia coli JJ1886 amino acid dehydrogenase YP_008720397.1 355089 D 1355100 CDS YP_008720398.1 556550491 17429157 356509..357204 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 357204 17429157 P423_01660 Escherichia coli JJ1886 hypothetical protein YP_008720398.1 356509 D 1355100 CDS YP_008720399.1 556554293 17429158 complement(357447..358115) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 358115 17429158 P423_01665 Escherichia coli JJ1886 membrane protein YP_008720399.1 357447 R 1355100 CDS YP_008720400.1 556554294 17429159 complement(358299..360590) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; autotransporter 360590 17429159 P423_01670 Escherichia coli JJ1886 autotransporter YP_008720400.1 358299 R 1355100 CDS YP_008720401.1 556554295 17429160 complement(360632..361393) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 361393 17429160 P423_01675 Escherichia coli JJ1886 hypothetical protein YP_008720401.1 360632 R 1355100 CDS YP_008720402.1 556550492 17429161 complement(362671..363234) 1 NC_022648.1 inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase 363234 17429161 P423_01680 Escherichia coli JJ1886 tyrosine recombinase YP_008720402.1 362671 R 1355100 CDS YP_008720403.1 556554296 17429162 364050..364277 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 364277 17429162 P423_01685 Escherichia coli JJ1886 hypothetical protein YP_008720403.1 364050 D 1355100 CDS YP_008720404.1 556550493 17429164 complement(366003..367475) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; betaine-aldehyde dehydrogenase 367475 17429164 P423_01695 Escherichia coli JJ1886 betaine-aldehyde dehydrogenase YP_008720404.1 366003 R 1355100 CDS YP_008720405.1 556550494 17429165 complement(367489..368076) 1 NC_022648.1 HTH-type; bet1; Repressor involved in choline regulation of the bet genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; BetI family transcriptional regulator 368076 17429165 P423_01700 Escherichia coli JJ1886 BetI family transcriptional regulator YP_008720405.1 367489 R 1355100 CDS YP_008720406.1 556554297 17429166 368205..370238 1 NC_022648.1 proton-motive-force-driven choline transporter; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; choline transporter BetT 370238 17429166 P423_01705 Escherichia coli JJ1886 choline transporter BetT YP_008720406.1 368205 D 1355100 CDS YP_008720407.1 556550495 17429167 371116..372204 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 372204 17429167 P423_01710 Escherichia coli JJ1886 cyclic di-GMP phosphodiesterase YP_008720407.1 371116 D 1355100 CDS YP_008720408.1 556550496 17429168 complement(372246..373178) 1 NC_022648.1 activator of the allDC-ylbA operon involved in allantoin utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 373178 17429168 P423_01715 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008720408.1 372246 R 1355100 CDS YP_008720409.1 556554298 17429169 complement(373270..373767) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 373767 17429169 P423_01720 Escherichia coli JJ1886 membrane protein YP_008720409.1 373270 R 1355100 CDS YP_008720410.1 556550497 17429170 374025..374630 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ankyrin 374630 17429170 P423_01725 Escherichia coli JJ1886 ankyrin YP_008720410.1 374025 D 1355100 CDS YP_008720411.1 556550498 17433817 375523..377070 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 377070 17433817 P423_01730 Escherichia coli JJ1886 hypothetical protein YP_008720411.1 375523 D 1355100 CDS YP_008720412.1 556550499 17429172 377070..378488 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 378488 17429172 P423_01735 Escherichia coli JJ1886 hypothetical protein YP_008720412.1 377070 D 1355100 CDS YP_008720413.1 556550500 17429173 378641..379591 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamate kinase 379591 17429173 P423_01740 Escherichia coli JJ1886 carbamate kinase YP_008720413.1 378641 D 1355100 CDS YP_008720414.1 556550501 17429174 379601..380983 1 NC_022648.1 metallo-dependent hydrolase superfamily; deaminase with metallo-dependent hydrolase domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; deaminase 380983 17429174 P423_01745 Escherichia coli JJ1886 deaminase YP_008720414.1 379601 D 1355100 CDS YP_008720415.1 556550502 17429175 381360..382409 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc-binding dehydrogenase 382409 17429175 P423_01750 Escherichia coli JJ1886 zinc-binding dehydrogenase YP_008720415.1 381360 D 1355100 CDS YP_008720416.1 556550503 17429176 complement(383293..383940) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 383940 17429176 P423_01755 Escherichia coli JJ1886 membrane protein YP_008720416.1 383293 R 1355100 CDS YP_008720417.1 556550504 17429177 384111..384386 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 384386 17429177 P423_01760 Escherichia coli JJ1886 hypothetical protein YP_008720417.1 384111 D 1355100 CDS YP_008720418.1 556550505 17429178 complement(384487..386073) 1 NC_022648.1 sigma-54 dependent activator family protein; activates the prpBCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; propionate catabolism operon regulatory protein PrpR 386073 17429178 P423_01765 Escherichia coli JJ1886 propionate catabolism operon regulatory protein PrpR YP_008720418.1 384487 R 1355100 CDS YP_008720419.1 556550506 17429179 386312..387202 1 NC_022648.1 catalyzes the formation of pyruvate and succinate from 2-methylisocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-methylisocitrate lyase 387202 prpB 17429179 prpB Escherichia coli JJ1886 2-methylisocitrate lyase YP_008720419.1 386312 D 1355100 CDS YP_008720420.1 556550507 17429180 387362..388531 1 NC_022648.1 catalyzes the synthesis of 2-methylcitrate from propionyl-CoA and oxaloacetate; also catalyzes the condensation of oxaloacetate with acetyl-CoA but with a lower specificity; Derived by automated computational analysis using gene prediction method: Protein Homology.; methylcitrate synthase 388531 17429180 P423_01775 Escherichia coli JJ1886 methylcitrate synthase YP_008720420.1 387362 D 1355100 CDS YP_008720421.1 556550508 17429181 388565..390016 1 NC_022648.1 functions in propionate metabolism; involved in isomerization of (2S,3S)-methylcitrate to (2R,3S)-methylisocitrate; also encodes minor aconitase or dehydratase activity; aconitase C; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-methylcitrate dehydratase 390016 prpD 17429181 prpD Escherichia coli JJ1886 2-methylcitrate dehydratase YP_008720421.1 388565 D 1355100 CDS YP_008720422.1 556550509 17429182 390056..391942 1 NC_022648.1 catalyzes the formation of propionyl-CoA using propionate as a substrate; PrpE from Ralstonia solanacearum can produce acetyl-, propionyl-, butyryl- and acrylyl-coenzyme A, and Salmonella enterica produces propionyl- and butyryl-coenzyme A; not expressed in Escherichia coli when grown on propionate/minimal media; ATP-dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA synthetase 391942 prpE 17429182 prpE Escherichia coli JJ1886 acetyl-CoA synthetase YP_008720422.1 390056 D 1355100 CDS YP_008720423.1 556550510 17429183 392267..393526 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytosine permease 393526 codB 17429183 codB Escherichia coli JJ1886 cytosine permease YP_008720423.1 392267 D 1355100 CDS YP_008720424.1 556550511 17429184 393516..394799 1 NC_022648.1 Catalyzes the deamination of cytosine to uracil and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytosine deaminase 394799 17429184 P423_01795 Escherichia coli JJ1886 cytosine deaminase YP_008720424.1 393516 D 1355100 CDS YP_008720425.1 556550512 17429185 complement(394920..395582) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose O-acetyltransferase 395582 17429185 P423_01800 Escherichia coli JJ1886 maltose O-acetyltransferase YP_008720425.1 394920 R 1355100 CDS YP_008720426.1 556550513 17429186 complement(395597..396850) 1 NC_022648.1 lactose/proton symporter; mediates lactose/proton symport through the membrane by utilizing the proton gradient to drive transport of galactosides; member of major facilitator superfamily; functions as a monomer with 12 transmembrane segments; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactoside permease 396850 lacY 17429186 lacY Escherichia coli JJ1886 galactoside permease YP_008720426.1 395597 R 1355100 CDS YP_008720427.1 556550514 17429187 complement(396902..399976) 1 NC_022648.1 forms a homotetramer; hydrolyzes lactose disaccharide to galactose and glucose; converts lactose to allolactose which is the natural inducer of the lac operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-galactosidase 399976 lacZ 17429187 lacZ Escherichia coli JJ1886 beta-D-galactosidase YP_008720427.1 396902 R 1355100 CDS YP_008720428.1 556550515 17429188 complement(400099..401181) 1 NC_022648.1 transcriptional repressor of lac operon; forms a homotetramer as a dimer of dimers; binds specific sites in lac operon resulting in DNA looping between the operators; binds allolactose as inducer; Derived by automated computational analysis using gene prediction method: Protein Homology.; lac repressor 401181 lacI 17429188 lacI Escherichia coli JJ1886 lac repressor YP_008720428.1 400099 R 1355100 CDS YP_008720429.1 556550516 17429190 402282..403946 1 NC_022648.1 catalyzes the formation of 3-(2,3-dihydroxyphenyl)propionate from 3-(3-hydroxyphenyl)propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-(3-hydroxyphenyl)propionate hydroxylase 403946 mhpA 17429190 mhpA Escherichia coli JJ1886 3-(3-hydroxyphenyl)propionate hydroxylase YP_008720429.1 402282 D 1355100 CDS YP_008720430.1 556550517 17429191 403948..404892 1 NC_022648.1 catalyzes the cleavage of 3-(2,3-dihydroxyphenyl) propionate into 2-hydroxy-6-oxonona-2,4-diene-1,9-dioate; part of the 3-phenylpropionic acid degradation pathway; member of the protocatechuate 4,5-dioxygenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-(2,3-dihydroxyphenyl)propionate dioxygenase 404892 mhpB 17429191 mhpB Escherichia coli JJ1886 3-(2,3-dihydroxyphenyl)propionate dioxygenase YP_008720430.1 403948 D 1355100 CDS YP_008720431.1 556550518 17429192 404895..405776 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase 405776 17429192 P423_01835 Escherichia coli JJ1886 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase YP_008720431.1 404895 D 1355100 CDS YP_008720432.1 556550519 17429193 405786..406595 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-4-pentenoate hydratase 406595 17429193 P423_01840 Escherichia coli JJ1886 2-keto-4-pentenoate hydratase YP_008720432.1 405786 D 1355100 CDS YP_008720433.1 556550520 17429194 406592..407542 1 NC_022648.1 catalyzes the formation of acetyl-CoA from acetalaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetaldehyde dehydrogenase 407542 17429194 P423_01845 Escherichia coli JJ1886 acetaldehyde dehydrogenase YP_008720433.1 406592 D 1355100 CDS YP_008720434.1 556550521 17429195 407539..408552 1 NC_022648.1 catalyzes the formation of pyruvate and acetaldehyde from 4-hydroxy-2-ketovaleric acid; involved in the degradation of phenylpropionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hyroxy-2-oxovalerate aldolase 408552 17429195 P423_01850 Escherichia coli JJ1886 4-hyroxy-2-oxovalerate aldolase YP_008720434.1 407539 D 1355100 CDS YP_008720435.1 556550522 17429196 408728..409939 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 409939 17429196 P423_01855 Escherichia coli JJ1886 MFS transporter YP_008720435.1 408728 D 1355100 CDS YP_008720436.1 556550523 17429197 410041..410580 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 410580 17429197 P423_01860 Escherichia coli JJ1886 hypothetical protein YP_008720436.1 410041 D 1355100 CDS YP_008720437.1 556550524 17429198 complement(410705..411538) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-formylglutathione hydrolase 411538 17429198 P423_01865 Escherichia coli JJ1886 S-formylglutathione hydrolase YP_008720437.1 410705 R 1355100 CDS YP_008720438.1 556550525 17429199 complement(411631..412740) 1 NC_022648.1 catalyzes the formation of S-formylglutathione from S-(hydroxymethyl)glutathione; also catalyzes the formation of aldehyde or ketone from alcohols; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-(hydroxymethyl)glutathione dehydrogenase 412740 17429199 P423_01870 Escherichia coli JJ1886 S-(hydroxymethyl)glutathione dehydrogenase YP_008720438.1 411631 R 1355100 CDS YP_008720439.1 556550526 17429200 complement(412775..413050) 1 NC_022648.1 DNA-binding; binds the RcnA promotor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 413050 17429200 P423_01875 Escherichia coli JJ1886 transcriptional regulator YP_008720439.1 412775 R 1355100 CDS YP_008720440.1 556550527 17429201 413356..414318 1 NC_022648.1 with TauB and TauC is responsible for taurine uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter substrate-binding protein 414318 tauA 17429201 tauA Escherichia coli JJ1886 taurine ABC transporter substrate-binding protein YP_008720440.1 413356 D 1355100 CDS YP_008720441.1 556550528 17429202 414331..415098 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 415098 17429202 P423_01885 Escherichia coli JJ1886 ATP-binding protein YP_008720441.1 414331 D 1355100 CDS YP_008720442.1 556550529 17429203 415095..415922 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter permease 415922 17429203 P423_01890 Escherichia coli JJ1886 taurine ABC transporter permease YP_008720442.1 415095 D 1355100 CDS YP_008720443.1 556550530 17429204 415919..416770 1 NC_022648.1 catalyzes the conversion of taurine (2-aminoethanesulfonate) to sulfite and aminoacetaldehyde concurrently with the conversion of alpha-ketoglutarate to succinate and carbon dioxide; non-heme iron oxidase; allows the use of taurine as an alternative sulfur source; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine dioxygenase 416770 tauD 17429204 tauD Escherichia coli JJ1886 taurine dioxygenase YP_008720443.1 415919 D 1355100 CDS YP_008720444.1 556550531 17429205 complement(416810..417784) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; delta-aminolevulinic acid dehydratase 417784 17429205 P423_01900 Escherichia coli JJ1886 delta-aminolevulinic acid dehydratase YP_008720444.1 416810 R 1355100 CDS YP_008720445.1 556554299 17429206 418310..421297 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 421297 17429206 P423_01905 Escherichia coli JJ1886 membrane protein YP_008720445.1 418310 D 1355100 CDS YP_008720446.1 556550532 17429207 421383..422006 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 422006 17429207 P423_01910 Escherichia coli JJ1886 transcriptional regulator YP_008720446.1 421383 D 1355100 CDS YP_008720447.1 556550533 17429208 complement(422007..423164) 1 NC_022648.1 this protein has no known enzymatic function; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-lactam binding protein AmpH 423164 17429208 P423_01915 Escherichia coli JJ1886 beta-lactam binding protein AmpH YP_008720447.1 422007 R 1355100 CDS YP_008720448.1 556550534 17429209 423516..424736 1 NC_022648.1 in Escherichia coli SbmA is involved in uptake of microcin J25; functions along with FhuA, TonB, and ExbB/D in this capacity; in Sinorhizobium meliloti, BacA is essential and required for symbiosis; defects appear to affect the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin B17 transporter 424736 17429209 P423_01920 Escherichia coli JJ1886 microcin B17 transporter YP_008720448.1 423516 D 1355100 CDS YP_008720449.1 556550535 17429210 424749..425843 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 425843 17429210 P423_01925 Escherichia coli JJ1886 hypothetical protein YP_008720449.1 424749 D 1355100 CDS YP_008720450.1 556550536 17429211 complement(425902..426210) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 426210 17429211 P423_01930 Escherichia coli JJ1886 membrane protein YP_008720450.1 425902 R 1355100 CDS YP_008720451.1 556550537 17429212 426443..426682 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 426682 17429212 P423_01935 Escherichia coli JJ1886 membrane protein YP_008720451.1 426443 D 1355100 CDS YP_008720452.1 556550538 17429213 complement(426706..427800) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanine--D-alanine ligase 427800 17429213 P423_01940 Escherichia coli JJ1886 D-alanine--D-alanine ligase YP_008720452.1 426706 R 1355100 CDS YP_008720453.1 556550539 17429214 428263..428523 1 NC_022648.1 RpoS stabilzer during Pi starvation; anti-adapter protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-RssB factor 428523 17429214 P423_01945 Escherichia coli JJ1886 anti-RssB factor YP_008720453.1 428263 D 1355100 CDS YP_008720454.1 556550540 17429215 428624..430039 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alkaline phosphatase 430039 17429215 P423_01950 Escherichia coli JJ1886 alkaline phosphatase YP_008720454.1 428624 D 1355100 CDS YP_008720455.1 556550541 17429216 430158..430478 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 430478 17429216 P423_01955 Escherichia coli JJ1886 hypothetical protein YP_008720455.1 430158 D 1355100 CDS YP_008720456.1 556550542 17429217 430580..431695 1 NC_022648.1 catalyzes the conversion of 2 GTP into c-di-GMP; adrA overexpression induces cellulose biosynthesis, cell adherence to abiotic surfaces and swimming and swarming motility; AdrA acts post-transcriptionally on the bcsABZC operon activating cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 431695 adrA 17429217 adrA Escherichia coli JJ1886 diguanylate cyclase YP_008720456.1 430580 D 1355100 CDS YP_008720457.1 556550543 17429218 complement(431712..432521) 1 NC_022648.1 catalyzes the formation of L-proline from pyrroline-5-carboxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrroline-5-carboxylate reductase 432521 17429218 P423_01965 Escherichia coli JJ1886 pyrroline-5-carboxylate reductase YP_008720457.1 431712 R 1355100 CDS YP_008720458.1 556550544 17429219 432641..433099 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 433099 17429219 P423_01970 Escherichia coli JJ1886 hypothetical protein YP_008720458.1 432641 D 1355100 CDS YP_008720459.1 556550545 17429220 433282..433806 1 NC_022648.1 type II enzyme similar to type I but differentially regulated and with a lower Km; catalyzes the formation of shikimate 3-phosphate from shikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate kinase 433806 aroL 17429220 aroL Escherichia coli JJ1886 shikimate kinase YP_008720459.1 433282 D 1355100 CDS YP_008720460.1 556550546 17429221 433856..434047 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 434047 17429221 P423_01980 Escherichia coli JJ1886 hypothetical protein YP_008720460.1 433856 D 1355100 CDS YP_008720461.1 556550547 17429222 434305..434982 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 434982 17429222 P423_01985 Escherichia coli JJ1886 hypothetical protein YP_008720461.1 434305 D 1355100 CDS YP_008720462.1 556550548 17429223 435054..435338 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 435338 17429223 P423_01990 Escherichia coli JJ1886 hypothetical protein YP_008720462.1 435054 D 1355100 CDS YP_008720463.1 556554300 17429224 complement(435442..435585) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 435585 17429224 P423_01995 Escherichia coli JJ1886 hypothetical protein YP_008720463.1 435442 R 1355100 CDS YP_008720464.1 556554301 17429225 435585..435827 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 435827 17429225 P423_02000 Escherichia coli JJ1886 hypothetical protein YP_008720464.1 435585 D 1355100 CDS YP_008720465.1 556550549 17429226 complement(435985..436962) 1 NC_022648.1 Required for efficient pilin antigenic variation; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase 436962 rdgC 17429226 rdgC Escherichia coli JJ1886 recombinase YP_008720465.1 435985 R 1355100 CDS YP_008720466.1 556550550 17429227 437021..437929 1 NC_022648.1 catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructokinase 437929 17429227 P423_02010 Escherichia coli JJ1886 fructokinase YP_008720466.1 437021 D 1355100 CDS YP_008720467.1 556550551 17429228 complement(438198..439466) 1 NC_022648.1 member of the major facilitator superfamily (MFS) of transporters; unknown function; may be associated with transport or processing of arabinose polymers; Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 439466 17429228 P423_02015 Escherichia coli JJ1886 MFS transporter YP_008720467.1 438198 R 1355100 CDS YP_008720468.1 556550552 17429229 complement(439508..442651) 1 NC_022648.1 with SbcD cleaves DNA hairpin structures; also has 5' single-strand endonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease subunit SbcC 442651 17429229 P423_02020 Escherichia coli JJ1886 exonuclease subunit SbcC YP_008720468.1 439508 R 1355100 CDS YP_008720469.1 556550553 17429230 complement(442648..443850) 1 NC_022648.1 with SbcC cleaves DNA hairpin structure, also has 5' single-strand endonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease subunit SbcD 443850 17429230 P423_02025 Escherichia coli JJ1886 exonuclease subunit SbcD YP_008720469.1 442648 R 1355100 CDS YP_008720470.1 556550554 17429231 444040..444729 1 NC_022648.1 two component response regulator for the phosphate regulon; PhoR phosphorylates PhoB; Derived by automated computational analysis using gene prediction method: Protein Homology.; PhoB family transcriptional regulator 444729 17429231 P423_02030 Escherichia coli JJ1886 PhoB family transcriptional regulator YP_008720470.1 444040 D 1355100 CDS YP_008720471.1 556550555 17429232 444787..446082 1 NC_022648.1 membrane-associated histidine protein kinase that phosphorylates phoB in response to environmental signals as part of the two-component phosphate regulatory system phoR/phoB; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate regulon sensor protein 446082 phoR 17429232 phoR Escherichia coli JJ1886 phosphate regulon sensor protein YP_008720471.1 444787 D 1355100 CDS YP_008720472.1 556550556 17429233 446489..447808 1 NC_022648.1 sodium:branched-chain amino acid symporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid transporter 2 carrier protein BrnQ 447808 17429233 P423_02040 Escherichia coli JJ1886 branched-chain amino acid transporter 2 carrier protein BrnQ YP_008720472.1 446489 D 1355100 CDS YP_008720473.1 556550557 17429234 447884..449257 1 NC_022648.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 449257 proY 17429234 proY Escherichia coli JJ1886 permease YP_008720473.1 447884 D 1355100 CDS YP_008720474.1 556550558 17429235 449416..451230 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltodextrin glucosidase 451230 17429235 P423_02050 Escherichia coli JJ1886 maltodextrin glucosidase YP_008720474.1 449416 D 1355100 CDS YP_008720475.1 556550559 17429236 complement(451235..451816) 1 NC_022648.1 Converts holo-ACP to apo-ACP by hydrolytic cleavage of the phosphopantetheine prosthetic group from ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; ACP phosphodiesterase 451816 17429236 P423_02055 Escherichia coli JJ1886 ACP phosphodiesterase YP_008720475.1 451235 R 1355100 CDS YP_008720476.1 556550560 17429237 451909..452979 1 NC_022648.1 Synthesizes oQ from preQ1 in a single S-adenosylmethionine-requiring step; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine tRNA ribosyltransferase 452979 queA 17429237 queA Escherichia coli JJ1886 S-adenosylmethionine tRNA ribosyltransferase YP_008720476.1 451909 D 1355100 CDS YP_008720477.1 556550561 17429238 453034..454161 1 NC_022648.1 Exchanges the guanine residue with 7-aminomethyl-7-deazaguanine in tRNAs with GU(N) anticodons (tRNA-Asp, -Asn, -His and -Tyr); Derived by automated computational analysis using gene prediction method: Protein Homology.; queuine tRNA-ribosyltransferase 454161 tgt 17429238 tgt Escherichia coli JJ1886 queuine tRNA-ribosyltransferase YP_008720477.1 453034 D 1355100 CDS YP_008720478.1 556550562 17429239 454184..454516 1 NC_022648.1 member of preprotein translocase; forms a heterotrimer with SecD and SecF; links the SecD/SecF/YajC/YidC complex with the SecY/SecE/SecG complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit YajC 454516 yajC 17429239 yajC Escherichia coli JJ1886 preprotein translocase subunit YajC YP_008720478.1 454184 D 1355100 CDS YP_008720479.1 556550563 17429240 454544..456391 1 NC_022648.1 part of the preprotein secretory system; when complexed with proteins SecF and YajC, SecDFyajC stimulates the proton motive force-driven protein translocation, and appears to be required for the release of mature proteins from the extracytoplasmic side of the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecD 456391 secD 17429240 secD Escherichia coli JJ1886 preprotein translocase subunit SecD YP_008720479.1 454544 D 1355100 CDS YP_008720480.1 556550564 17429241 456402..457373 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecF 457373 17429241 P423_02080 Escherichia coli JJ1886 preprotein translocase subunit SecF YP_008720480.1 456402 D 1355100 CDS YP_008720481.1 556550565 17429242 457503..457850 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 457850 17429242 P423_02085 Escherichia coli JJ1886 hypothetical protein YP_008720481.1 457503 D 1355100 CDS YP_008720482.1 556550566 17429243 complement(457888..458772) 1 NC_022648.1 receptor of phage T6 and colicin K; involved in the transfer of deoxyribo- and ribo-nucleotides across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; ion channel protein Tsx 458772 17429243 P423_02090 Escherichia coli JJ1886 ion channel protein Tsx YP_008720482.1 457888 R 1355100 CDS YP_008720483.1 556550567 17429244 complement(459071..459610) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 459610 17429244 P423_02095 Escherichia coli JJ1886 hypothetical protein YP_008720483.1 459071 R 1355100 CDS YP_008720484.1 556550568 17429245 459761..460210 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NrdR family transcriptional regulator 460210 17429245 P423_02100 Escherichia coli JJ1886 NrdR family transcriptional regulator YP_008720484.1 459761 D 1355100 CDS YP_008720485.1 556550569 17429246 460214..461317 1 NC_022648.1 riboflavin biosynthesis protein which catalyzes the deamination and reduction steps in the riboflavin biosynthesis pathway; catalyzes the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and the formation of 5-amino-6-(5-phosphoribosylamino)uracil from 5-amino-6-(5-phosphoribitylamino)uracil; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminohydroxyphosphoribosylaminopyrimidine deaminase 461317 ribD 17429246 ribD Escherichia coli JJ1886 diaminohydroxyphosphoribosylaminopyrimidine deaminase YP_008720485.1 460214 D 1355100 CDS YP_008720486.1 556550570 17429247 461406..461876 1 NC_022648.1 RibE; 6,7-diimethyl-8-ribityllumazine synthase; DMRL synthase; lumazine synthase; beta subunit of riboflavin synthase; condenses 5-amino-6-(1'-D)-ribityl-amino-2,4(1H,3H)-pyrimidinedione with L-3,4-dihydrohy-2-butanone-4-phosphate to generate 6,6-dimethyl-8-lumazine (DMRL); riboflavin synthase then uses 2 molecules of DMRL to produce riboflavin (vitamin B12); involved in the last steps of riboflavin biosynthesis; forms a 60mer (icosahedral shell) in both Bacillus subtilis and Escherichia coli; in Bacillus subtilis this 60mer is associated with the riboflavin synthase subunit (alpha) while in Escherichia coli it is not; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6,7-dimethyl-8-ribityllumazine synthase 461876 ribH 17429247 ribH Escherichia coli JJ1886 6,7-dimethyl-8-ribityllumazine synthase YP_008720486.1 461406 D 1355100 CDS YP_008720487.1 556550571 17429248 461896..462315 1 NC_022648.1 Regulates rRNA biosynthesis by transcriptional antitermination; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription antitermination protein NusB 462315 nusB 17429248 nusB Escherichia coli JJ1886 transcription antitermination protein NusB YP_008720487.1 461896 D 1355100 CDS YP_008720488.1 556550572 17429249 462393..463370 1 NC_022648.1 catalyzes the formation of thiamine diphosphate from thiamine phosphate ant ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine monophosphate kinase 463370 17429249 P423_02120 Escherichia coli JJ1886 thiamine monophosphate kinase YP_008720488.1 462393 D 1355100 CDS YP_008720489.1 556550573 17429250 463348..463866 1 NC_022648.1 hydrolyzes phosphatidylglycerophosphate to produce phosphatidylglycerol and phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylglycerophosphatase A 463866 17429250 P423_02125 Escherichia coli JJ1886 phosphatidylglycerophosphatase A YP_008720489.1 463348 D 1355100 CDS YP_008720490.1 556550574 17429251 complement(463920..464894) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 464894 17429251 P423_02130 Escherichia coli JJ1886 oxidoreductase YP_008720490.1 463920 R 1355100 CDS YP_008720491.1 556550575 17429252 complement(464949..466811) 1 NC_022648.1 catalyzes the formation of 1-deoxy-D-xylulose 5-phosphate from pyruvate and D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-deoxy-D-xylulose-5-phosphate synthase 466811 17429252 P423_02135 Escherichia coli JJ1886 1-deoxy-D-xylulose-5-phosphate synthase YP_008720491.1 464949 R 1355100 CDS YP_008720492.1 556550576 17429253 complement(466836..467735) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; geranyltranstransferase 467735 17429253 P423_02140 Escherichia coli JJ1886 geranyltranstransferase YP_008720492.1 466836 R 1355100 CDS YP_008720493.1 556550577 17429254 complement(467735..467977) 1 NC_022648.1 catalyzes the bidirectional exonucleolytic cleavage of DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease VII small subunit 467977 17429254 P423_02145 Escherichia coli JJ1886 exodeoxyribonuclease VII small subunit YP_008720493.1 467735 R 1355100 CDS YP_008720494.1 556550578 17429255 468183..469631 1 NC_022648.1 catalyzes the conversion of uridine to 4-thiouridinine tRNA; also required for the synthesis of the thiazole moiety; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA s(4)U8 sulfurtransferase 469631 17429255 P423_02150 Escherichia coli JJ1886 tRNA s(4)U8 sulfurtransferase YP_008720494.1 468183 D 1355100 CDS YP_008720495.1 556550579 17429256 complement(469685..470275) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidative-stress-resistance chaperone 470275 17429256 P423_02155 Escherichia coli JJ1886 oxidative-stress-resistance chaperone YP_008720495.1 469685 R 1355100 CDS YP_008720496.1 556550580 17429257 complement(470238..471149) 1 NC_022648.1 ketopantoate reductase; catalyzes the NADPH reduction of ketopantoate to pantoate; functions in pantothenate (vitamin B5) biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydropantoate 2-reductase 471149 17429257 P423_02160 Escherichia coli JJ1886 2-dehydropantoate 2-reductase YP_008720496.1 470238 R 1355100 CDS YP_008720497.1 556550581 17429258 471317..471808 1 NC_022648.1 nucleotide binding property based on structural studies of Haemophilus influenzae crystallized protein in PDB Accession Number 1IN0 and NMR studies of Escherichia coli YajQ; the YajQ protein from Pseudomonas synringae appears to play a role in activation of bateriophage phi6 segment L transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotide-binding protein 471808 17429258 P423_02165 Escherichia coli JJ1886 nucleotide-binding protein YP_008720497.1 471317 D 1355100 CDS YP_008720498.1 556550582 17429259 complement(471936..473300) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 473300 17429259 P423_02170 Escherichia coli JJ1886 membrane protein YP_008720498.1 471936 R 1355100 CDS YP_008720499.1 556550583 17429260 complement(473449..474339) 1 NC_022648.1 converts protoheme IX and farnesyl diphosphate to heme O; Derived by automated computational analysis using gene prediction method: Protein Homology.; protoheme IX farnesyltransferase 474339 17429260 P423_02175 Escherichia coli JJ1886 protoheme IX farnesyltransferase YP_008720499.1 473449 R 1355100 CDS YP_008720500.1 556550584 17429261 complement(474351..474680) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 474680 17429261 P423_02180 Escherichia coli JJ1886 cytochrome O ubiquinol oxidase YP_008720500.1 474351 R 1355100 CDS YP_008720501.1 556550585 17429262 complement(474680..475294) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 475294 17429262 P423_02185 Escherichia coli JJ1886 cytochrome O ubiquinol oxidase YP_008720501.1 474680 R 1355100 CDS YP_008720502.1 556550586 17429263 complement(475284..477275) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 477275 17429263 P423_02190 Escherichia coli JJ1886 cytochrome O ubiquinol oxidase YP_008720502.1 475284 R 1355100 CDS YP_008720503.1 556550587 17429264 complement(477297..478244) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome O ubiquinol oxidase 478244 17429264 P423_02195 Escherichia coli JJ1886 cytochrome O ubiquinol oxidase YP_008720503.1 477297 R 1355100 CDS YP_008720504.1 556550588 17429265 complement(478704..480179) 1 NC_022648.1 in Escherichia coli this protein is a permease involved in peptidoglycan recycling; member of major facilitator superfamily; MFS; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; muropeptide transporter 480179 ampG 17429265 ampG Escherichia coli JJ1886 muropeptide transporter YP_008720504.1 478704 R 1355100 CDS YP_008720505.1 556550589 17429266 complement(480223..480801) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 480801 17429266 P423_02205 Escherichia coli JJ1886 hypothetical protein YP_008720505.1 480223 R 1355100 CDS YP_008720506.1 556550590 17429267 481106..481423 1 NC_022648.1 positive transcriptional regulator of morphogenetic pathway; controlling several genes involved in oxidative stress, acid stress, heat shock, osmotic shock, and carbon-starvation stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; BolA family transcriptional regulator 481423 17429267 P423_02210 Escherichia coli JJ1886 BolA family transcriptional regulator YP_008720506.1 481106 D 1355100 CDS YP_008720507.1 556554302 17429268 481432..481620 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 481620 17429268 P423_02215 Escherichia coli JJ1886 hypothetical protein YP_008720507.1 481432 D 1355100 CDS YP_008720508.1 556550591 17429269 481767..483065 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; trigger factor 483065 17429269 P423_02220 Escherichia coli JJ1886 trigger factor YP_008720508.1 481767 D 1355100 CDS YP_008720509.1 556550592 17429270 483311..483934 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Clp protease proteolytic subunit ClpP 483934 17429270 P423_02225 Escherichia coli JJ1886 Clp protease proteolytic subunit ClpP YP_008720509.1 483311 D 1355100 CDS YP_008720510.1 556550593 17429271 484060..485334 1 NC_022648.1 binds and unfolds substrates as part of the ClpXP protease; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 485334 clpX 17429271 clpX Escherichia coli JJ1886 ATP-dependent protease YP_008720510.1 484060 D 1355100 CDS YP_008720511.1 556550594 17429272 485522..487876 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 487876 17429272 P423_02235 Escherichia coli JJ1886 peptidase YP_008720511.1 485522 D 1355100 CDS YP_008720512.1 556550595 17429273 488085..488357 1 NC_022648.1 histone-like DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 488357 17429273 P423_02240 Escherichia coli JJ1886 transcriptional regulator YP_008720512.1 488085 D 1355100 CDS YP_008720513.1 556550596 17429274 488549..490420 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; folding chaperone 490420 17429274 P423_02245 Escherichia coli JJ1886 folding chaperone YP_008720513.1 488549 D 1355100 CDS YP_008720514.1 556550597 17429275 490571..490942 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 490942 17429275 P423_02250 Escherichia coli JJ1886 hypothetical protein YP_008720514.1 490571 D 1355100 CDS YP_008720515.1 556550598 17429276 491060..491458 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thioesterase 491458 17429276 P423_02255 Escherichia coli JJ1886 thioesterase YP_008720515.1 491060 D 1355100 CDS YP_008720516.1 556550599 17429277 complement(491510..492205) 1 NC_022648.1 YbaX; catalyzes the transformation of GTP to 7-cyano-7-deazaguanine (preQ0), as one of the early reactions of quenosine biosynthesis; quenosine is a modified nucleoside that occurs at the wobble position of GUN anticodons in tRNAs for Asn, Asp, Tyr, and His; Derived by automated computational analysis using gene prediction method: Protein Homology.; queuosine biosynthesis protein QueC 492205 17429277 P423_02260 Escherichia coli JJ1886 queuosine biosynthesis protein QueC YP_008720516.1 491510 R 1355100 CDS YP_008720517.1 556550600 17429278 complement(492270..493970) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 493970 17429278 P423_02265 Escherichia coli JJ1886 hypothetical protein YP_008720517.1 492270 R 1355100 CDS YP_008720518.1 556550601 17429279 494070..494888 1 NC_022648.1 HMP-PP phosphatase; catalyzes the hydrolysis of 4-amino-2-methyl-5-hydroxymethylpyrimidine pyrophosphate (HMP-PP) to 4-amino-2-methyl-5-hydroxymethylpyrimidine phosphate (HMP-P); Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamin pyrimidine pyrophosphate hydrolase 494888 17429279 P423_02270 Escherichia coli JJ1886 thiamin pyrimidine pyrophosphate hydrolase YP_008720518.1 494070 D 1355100 CDS YP_008720519.1 556550602 17429280 495041..495499 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 495499 17429280 P423_02275 Escherichia coli JJ1886 transcriptional regulator YP_008720519.1 495041 D 1355100 CDS YP_008720520.1 556550603 17429281 495529..497301 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 497301 17429281 P423_02280 Escherichia coli JJ1886 multidrug ABC transporter ATP-binding protein YP_008720520.1 495529 D 1355100 CDS YP_008720521.1 556550604 17429282 497294..499075 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 499075 17429282 P423_02285 Escherichia coli JJ1886 multidrug ABC transporter ATP-binding protein YP_008720521.1 497294 D 1355100 CDS YP_008720522.1 556554303 17429283 complement(499089..499229) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 499229 17429283 P423_02290 Escherichia coli JJ1886 hypothetical protein YP_008720522.1 499089 R 1355100 CDS YP_008720523.1 556550605 17429284 499256..499594 1 NC_022648.1 indirectly regulates nitrogen metabolism; at high nitrogen levels P-II 2 prevents the phosphorylation of NR-I, the transcriptional activator of the glutamine synthetase gene (glnA); at low nitrogen levels P-II 2 is uridylylated to form PII-UMP and interacts with an adenylyltransferase (GlnE) that activates GlnA; functionally it is equivalent to protein P-II (GlnB), but itsexpression is driven by the presence of uridylyltransferase, nitrogen regulator I, and the absence of ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulatory protein P-II 2 499594 17429284 P423_02295 Escherichia coli JJ1886 nitrogen regulatory protein P-II 2 YP_008720523.1 499256 D 1355100 CDS YP_008720524.1 556550606 17429285 499624..500910 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ammonium transporter 500910 17429285 P423_02300 Escherichia coli JJ1886 ammonium transporter YP_008720524.1 499624 D 1355100 CDS YP_008720525.1 556550607 17429286 complement(500959..501819) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 501819 17429286 P423_02305 Escherichia coli JJ1886 acyl-CoA thioesterase YP_008720525.1 500959 R 1355100 CDS YP_008720526.1 556550608 17429287 502037..502609 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 502609 17429287 P423_02310 Escherichia coli JJ1886 hypothetical protein YP_008720526.1 502037 D 1355100 CDS YP_008720527.1 556554304 17429288 complement(502640..502951) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 502951 17429288 P423_02315 Escherichia coli JJ1886 hypothetical protein YP_008720527.1 502640 R 1355100 CDS YP_008720528.1 556550609 17429289 503330..503683 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 503683 17429289 P423_02320 Escherichia coli JJ1886 hypothetical protein YP_008720528.1 503330 D 1355100 CDS YP_008720529.1 556550610 17429290 complement(503725..505281) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 505281 17429290 P423_02325 Escherichia coli JJ1886 hypothetical protein YP_008720529.1 503725 R 1355100 CDS YP_008720530.1 556550611 17429291 complement(505439..505909) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 505909 17429291 P423_02330 Escherichia coli JJ1886 membrane protein YP_008720530.1 505439 R 1355100 CDS YP_008720531.1 556550612 17429292 complement(506025..506576) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose O-acetyltransferase 506576 17429292 P423_02335 Escherichia coli JJ1886 maltose O-acetyltransferase YP_008720531.1 506025 R 1355100 CDS YP_008720532.1 556550613 17429293 complement(506750..506968) 1 NC_022648.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 506968 17429293 P423_02340 Escherichia coli JJ1886 gene expression modulator YP_008720532.1 506750 R 1355100 CDS YP_008720533.1 556550614 17429294 complement(506994..507368) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Hha toxicity attenuator 507368 17429294 P423_02345 Escherichia coli JJ1886 Hha toxicity attenuator YP_008720533.1 506994 R 1355100 CDS YP_008720534.1 556550615 17429295 complement(507914..511063) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 511063 17429295 P423_02350 Escherichia coli JJ1886 multidrug transporter YP_008720534.1 507914 R 1355100 CDS YP_008720535.1 556550616 17429296 complement(511086..512279) 1 NC_022648.1 with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 512279 17429296 P423_02355 Escherichia coli JJ1886 multidrug transporter YP_008720535.1 511086 R 1355100 CDS YP_008720536.1 556550617 17429297 512421..513068 1 NC_022648.1 regulates the acrAB operon which is involved in susceptibility to dephalothin and cephaloridine; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 513068 17429297 P423_02360 Escherichia coli JJ1886 transcriptional regulator YP_008720536.1 512421 D 1355100 CDS YP_008720537.1 556550618 17429298 513196..516558 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 516558 17429298 P423_02365 Escherichia coli JJ1886 hypothetical protein YP_008720537.1 513196 D 1355100 CDS YP_008720538.1 556550619 17429299 complement(516597..516761) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 516761 17429299 P423_02370 Escherichia coli JJ1886 hypothetical protein YP_008720538.1 516597 R 1355100 CDS YP_008720539.1 556550620 17429300 complement(516775..517302) 1 NC_022648.1 PriC; protein involved in DNA replication; part of the primosome, a protein complex required to restart stalled replication forks; binds the complex formed by PriA, PriB and DNA; PriC-dependent primosome requires a gap to restart DNA replication; stimulates Rep activity at stalled forks; Derived by automated computational analysis using gene prediction method: Protein Homology.; primosomal replication protein N'' 517302 17429300 P423_02375 Escherichia coli JJ1886 primosomal replication protein N'' YP_008720539.1 516775 R 1355100 CDS YP_008720540.1 556550621 17429301 517372..517749 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 517749 17429301 P423_02380 Escherichia coli JJ1886 membrane protein YP_008720540.1 517372 D 1355100 CDS YP_008720541.1 556550622 17429302 517902..518453 1 NC_022648.1 catalyzes a salvage reaction resulting in the formation of AMP which is metabolically less costly than a de novo synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine phosphoribosyltransferase 518453 17429302 P423_02385 Escherichia coli JJ1886 adenine phosphoribosyltransferase YP_008720541.1 517902 D 1355100 CDS YP_008720542.1 556550623 17429303 518582..520513 1 NC_022648.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the tau chain serves as a scaffold to help in the dimerizaton of the alpha,epsilon and theta core complex; the gamma chain seems to interact with the delta and delta' subunits to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunits gamma and tau 520513 17429303 P423_02390 Escherichia coli JJ1886 DNA polymerase III subunits gamma and tau YP_008720542.1 518582 D 1355100 CDS YP_008720543.1 556550624 17429304 520566..520895 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 520895 17429304 P423_02395 Escherichia coli JJ1886 hypothetical protein YP_008720543.1 520566 D 1355100 CDS YP_008720544.1 556550625 17429305 520895..521500 1 NC_022648.1 involved in a recombinational process of DNA repair, independent of the recBC complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase RecR 521500 recR 17429305 recR Escherichia coli JJ1886 recombinase RecR YP_008720544.1 520895 D 1355100 CDS YP_008720545.1 556550626 17429306 521610..523484 1 NC_022648.1 molecular chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein 90 523484 17429306 P423_02405 Escherichia coli JJ1886 heat shock protein 90 YP_008720545.1 521610 D 1355100 CDS YP_008720546.1 556550627 17429307 523665..524309 1 NC_022648.1 essential enzyme that recycles AMP in active cells; converts ATP and AMP to two molecules of ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylate kinase 524309 adk 17429307 adk Escherichia coli JJ1886 adenylate kinase YP_008720546.1 523665 D 1355100 CDS YP_008720547.1 556550628 17429308 524441..525403 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferrochelatase 525403 17429308 P423_02415 Escherichia coli JJ1886 ferrochelatase YP_008720547.1 524441 D 1355100 CDS YP_008720548.1 556550629 17429309 complement(525400..526359) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl esterase 526359 17429309 P423_02420 Escherichia coli JJ1886 acetyl esterase YP_008720548.1 525400 R 1355100 CDS YP_008720549.1 556550630 17429310 526511..527815 1 NC_022648.1 catalyzes the formation of inosine/guanosine monophosphate from inosine or guanosine and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; inosine/guanosine kinase 527815 17429310 P423_02425 Escherichia coli JJ1886 inosine/guanosine kinase YP_008720549.1 526511 D 1355100 CDS YP_008720550.1 556550631 17429311 complement(527945..529621) 1 NC_022648.1 YbaL; member of the CPA-2 family of antiporters; uncharacterized protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; cation:proton antiport protein 529621 17429311 P423_02430 Escherichia coli JJ1886 cation:proton antiport protein YP_008720550.1 527945 R 1355100 CDS YP_008720551.1 556550632 17429312 complement(529860..531080) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fosmidomycin resistance protein 531080 17429312 P423_02435 Escherichia coli JJ1886 Fosmidomycin resistance protein YP_008720551.1 529860 R 1355100 CDS YP_008720552.1 556550633 17429313 531298..532950 1 NC_022648.1 catalyzes the degradation of periplasmic UDP-glucose to uridine, glucose-1-phosphate and inorganic phosphate; specific for uridine nucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-nucleotidase 532950 ushA 17429313 ushA Escherichia coli JJ1886 5'-nucleotidase YP_008720552.1 531298 D 1355100 CDS YP_008720553.1 556554305 17429314 complement(532988..533491) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 533491 17429314 P423_02445 Escherichia coli JJ1886 hypothetical protein YP_008720553.1 532988 R 1355100 CDS YP_008720554.1 556554306 17429315 complement(533488..534288) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 534288 17429315 P423_02450 Escherichia coli JJ1886 hypothetical protein YP_008720554.1 533488 R 1355100 CDS YP_008720555.1 556550634 17429316 complement(534312..534791) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 534791 17429316 P423_02455 Escherichia coli JJ1886 hypothetical protein YP_008720555.1 534312 R 1355100 CDS YP_008720556.1 556550635 17429317 complement(534995..535789) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 535789 17429317 P423_02460 Escherichia coli JJ1886 hypothetical protein YP_008720556.1 534995 R 1355100 CDS YP_008720557.1 556554307 17429318 535922..536224 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 536224 17429318 P423_02465 Escherichia coli JJ1886 hypothetical protein YP_008720557.1 535922 D 1355100 CDS YP_008720558.1 556550636 17429319 536260..536601 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 536601 17429319 P423_02470 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008720558.1 536260 D 1355100 CDS YP_008720559.1 556550637 17429320 complement(536659..539163) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; copper exporting ATPase 539163 copA 17429320 copA Escherichia coli JJ1886 copper exporting ATPase YP_008720559.1 536659 R 1355100 CDS YP_008720560.1 556550638 17429321 539425..540357 1 NC_022648.1 catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminase 540357 17429321 P423_02480 Escherichia coli JJ1886 glutaminase YP_008720560.1 539425 D 1355100 CDS YP_008720561.1 556550639 17429322 540360..541652 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid permease 541652 17429322 P423_02485 Escherichia coli JJ1886 amino acid permease YP_008720561.1 540360 D 1355100 CDS YP_008720562.1 556550640 17429323 541777..542184 1 NC_022648.1 activator of copper-responsive regulon genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 542184 17429323 P423_02490 Escherichia coli JJ1886 transcriptional regulator YP_008720562.1 541777 D 1355100 CDS YP_008720563.1 556554308 17429324 complement(542185..542664) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 542664 17429324 P423_02495 Escherichia coli JJ1886 hypothetical protein YP_008720563.1 542185 R 1355100 CDS YP_008720564.1 556550641 17429325 complement(543014..543472) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 543472 17429325 P423_02500 Escherichia coli JJ1886 membrane protein YP_008720564.1 543014 R 1355100 CDS YP_008720565.1 556550642 17429326 complement(543469..544386) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 544386 17429326 P423_02505 Escherichia coli JJ1886 protease YP_008720565.1 543469 R 1355100 CDS YP_008720566.1 556554309 17429327 544532..545209 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; putrescine/spermidine ABC transporter ATP-binding protein 545209 17429327 P423_02510 Escherichia coli JJ1886 putrescine/spermidine ABC transporter ATP-binding protein YP_008720566.1 544532 D 1355100 CDS YP_008720567.1 556550643 17429328 545196..545975 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 545975 17429328 P423_02515 Escherichia coli JJ1886 membrane protein YP_008720567.1 545196 D 1355100 CDS YP_008720568.1 556550644 17429329 complement(546158..547012) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 547012 17429329 P423_02520 Escherichia coli JJ1886 hypothetical protein YP_008720568.1 546158 R 1355100 CDS YP_008720569.1 556550645 17429330 complement(547073..547882) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 547882 17429330 P423_02525 Escherichia coli JJ1886 oxidoreductase YP_008720569.1 547073 R 1355100 CDS YP_008720570.1 556550646 17429331 complement(547872..548498) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 548498 17429331 P423_02530 Escherichia coli JJ1886 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1 YP_008720570.1 547872 R 1355100 CDS YP_008720571.1 556554310 17429332 548466..549152 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphonate ABC transporter ATP-binding protein 549152 17429332 P423_02535 Escherichia coli JJ1886 phosphonate ABC transporter ATP-binding protein YP_008720571.1 548466 D 1355100 CDS YP_008720572.1 556550647 17429333 549149..551563 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 551563 17429333 P423_02540 Escherichia coli JJ1886 sugar ABC transporter permease YP_008720572.1 549149 D 1355100 CDS YP_008720573.1 556550648 17429334 551732..553735 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 553735 17429334 P423_02545 Escherichia coli JJ1886 hypothetical protein YP_008720573.1 551732 D 1355100 CDS YP_008720574.1 556554311 17429335 553725..554384 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 554384 17429335 P423_02550 Escherichia coli JJ1886 hypothetical protein YP_008720574.1 553725 D 1355100 CDS YP_008720575.1 556554312 17429336 554391..555059 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 555059 17429336 P423_02555 Escherichia coli JJ1886 hypothetical protein YP_008720575.1 554391 D 1355100 CDS YP_008720576.1 556554313 17429337 555336..555734 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 555734 17429337 P423_02560 Escherichia coli JJ1886 hypothetical protein YP_008720576.1 555336 D 1355100 CDS YP_008720577.1 556550649 17429338 complement(555786..556892) 1 NC_022648.1 catalyzes the selenophosphate-dependent transfer of selenium from selenophosphate for conversion of 2-thiouridine to 2-selenouridine at the wobble position in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA 2-selenouridine synthase 556892 17429338 P423_02565 Escherichia coli JJ1886 tRNA 2-selenouridine synthase YP_008720577.1 555786 R 1355100 CDS YP_008720578.1 556550650 17429339 complement(556961..557887) 1 NC_022648.1 activator of the allDC-ylbA operon involved in allantoin utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 557887 17429339 P423_02570 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008720578.1 556961 R 1355100 CDS YP_008720579.1 556550651 17429340 558117..558599 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ureidoglycolate hydrolase 558599 17429340 P423_02575 Escherichia coli JJ1886 ureidoglycolate hydrolase YP_008720579.1 558117 D 1355100 CDS YP_008720580.1 556550652 17429341 558677..559492 1 NC_022648.1 regulates operons involved in the utilization of allantoin; Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 559492 17429341 P423_02580 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008720580.1 558677 D 1355100 CDS YP_008720581.1 556550653 17429342 559582..561363 1 NC_022648.1 catalyzes the formation of 2-hydroxy-3-oxopropanoate (tartronate semialdehyde) from two molecules of glyoxylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glyoxylate carboligase 561363 17429342 P423_02585 Escherichia coli JJ1886 glyoxylate carboligase YP_008720581.1 559582 D 1355100 CDS YP_008720582.1 556550654 17429343 561376..562152 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxypyruvate isomerase 562152 17429343 P423_02590 Escherichia coli JJ1886 hydroxypyruvate isomerase YP_008720582.1 561376 D 1355100 CDS YP_008720583.1 556550655 17429344 562252..563130 1 NC_022648.1 NADH-dependent; catalyzed the reversible formation of glycerate from tartronate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; tartronate semialdehyde reductase 563130 17429344 P423_02595 Escherichia coli JJ1886 tartronate semialdehyde reductase YP_008720583.1 562252 D 1355100 CDS YP_008720584.1 556550656 17429345 563300..564754 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; allantoin permease 564754 17429345 P423_02600 Escherichia coli JJ1886 allantoin permease YP_008720584.1 563300 D 1355100 CDS YP_008720585.1 556550657 17429346 564814..566175 1 NC_022648.1 Plays a crucial role on both purine and pyrimidine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; allantoinase 566175 17429346 P423_02605 Escherichia coli JJ1886 allantoinase YP_008720585.1 564814 D 1355100 CDS YP_008720586.1 556550658 17429347 566231..567532 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine permease 567532 17429347 P423_02610 Escherichia coli JJ1886 purine permease YP_008720586.1 566231 D 1355100 CDS YP_008720587.1 556550659 17429348 567554..568699 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerate kinase 568699 17429348 P423_02615 Escherichia coli JJ1886 glycerate kinase YP_008720587.1 567554 D 1355100 CDS YP_008720588.1 556550660 17429349 complement(568828..569613) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 569613 17429349 P423_02620 Escherichia coli JJ1886 hypothetical protein YP_008720588.1 568828 R 1355100 CDS YP_008720589.1 556550661 17429350 complement(569624..570859) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; allantoate amidohydrolase 570859 17429350 P423_02625 Escherichia coli JJ1886 allantoate amidohydrolase YP_008720589.1 569624 R 1355100 CDS YP_008720590.1 556550662 17429351 complement(570881..571930) 1 NC_022648.1 catalyzes the formation of oxalurate from ureidoglycolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ureidoglycolate dehydrogenase 571930 17429351 P423_02630 Escherichia coli JJ1886 ureidoglycolate dehydrogenase YP_008720590.1 570881 R 1355100 CDS YP_008720591.1 556550663 17429352 572247..573914 1 NC_022648.1 multicopy suppressor of dominant negative ftsH mutations; putative acyl-CoA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 573914 17429352 P423_02635 Escherichia coli JJ1886 membrane protein YP_008720591.1 572247 D 1355100 CDS YP_008720592.1 556550664 17429353 573924..575183 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 575183 17429353 P423_02640 Escherichia coli JJ1886 hypothetical protein YP_008720592.1 573924 D 1355100 CDS YP_008720593.1 556550665 17429354 575194..576009 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 576009 17429354 P423_02645 Escherichia coli JJ1886 hypothetical protein YP_008720593.1 575194 D 1355100 CDS YP_008720594.1 556550666 17429356 complement(577432..578499) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylaminoimidazole carboxylase 578499 17429356 P423_02655 Escherichia coli JJ1886 phosphoribosylaminoimidazole carboxylase YP_008720594.1 577432 R 1355100 CDS YP_008720595.1 556550667 17429357 complement(578496..579005) 1 NC_022648.1 catalyzes the formation of 4-carboxy-5-aminoimidazole ribonucleotide from N5-carboxyaminoimidazole ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; N5-carboxyaminoimidazole ribonucleotide mutase 579005 purE 17429357 purE Escherichia coli JJ1886 N5-carboxyaminoimidazole ribonucleotide mutase YP_008720595.1 578496 R 1355100 CDS YP_008720596.1 556554314 17429358 complement(579101..579430) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 579430 17429358 P423_02665 Escherichia coli JJ1886 hypothetical protein YP_008720596.1 579101 R 1355100 CDS YP_008720597.1 556550668 17429359 complement(579541..580263) 1 NC_022648.1 catalyzes the formation of 2,3=diacylglucosamine 1-phosphate from UDP-2,3=diacylglucosamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-2,3-diacylglucosamine hydrolase 580263 17429359 P423_02670 Escherichia coli JJ1886 UDP-2,3-diacylglucosamine hydrolase YP_008720597.1 579541 R 1355100 CDS YP_008720598.1 556550669 17429360 complement(580266..580760) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 580760 17429360 P423_02675 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008720598.1 580266 R 1355100 CDS YP_008720599.1 556550670 17429361 580934..582319 1 NC_022648.1 catalyzes a two-step reaction; charges a cysteine by linking its carboxyl group to the alpha-phosphate of ATP then transfers the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteinyl-tRNA synthetase 582319 cysS 17429361 cysS Escherichia coli JJ1886 cysteinyl-tRNA synthetase YP_008720599.1 580934 D 1355100 CDS YP_008720600.1 556550671 17429362 complement(582355..582876) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 582876 17429362 P423_02685 Escherichia coli JJ1886 membrane protein YP_008720600.1 582355 R 1355100 CDS YP_008720601.1 556550672 17429363 complement(582984..583196) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-associated protein 583196 17429363 P423_02690 Escherichia coli JJ1886 ribosome-associated protein YP_008720601.1 582984 R 1355100 CDS YP_008720602.1 556550673 17429364 complement(583198..584064) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methenyltetrahydrofolate cyclohydrolase 584064 17429364 P423_02695 Escherichia coli JJ1886 methenyltetrahydrofolate cyclohydrolase YP_008720602.1 583198 R 1355100 CDS YP_008720603.1 556554315 17429365 584114..584236 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 584236 17429365 P423_02700 Escherichia coli JJ1886 hypothetical protein YP_008720603.1 584114 D 1355100 CDS YP_008720604.1 556554316 17433819 585104..585409 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail fiber assembly protein 585409 17433819 P423_02710 Escherichia coli JJ1886 tail fiber assembly protein YP_008720604.1 585104 D 1355100 CDS YP_008720605.1 556554317 17429368 complement(585464..586120) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 586120 17429368 P423_02715 Escherichia coli JJ1886 hypothetical protein YP_008720605.1 585464 R 1355100 CDS YP_008720606.1 556550674 17429369 complement(586364..587317) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 587317 17429369 P423_02720 Escherichia coli JJ1886 protease YP_008720606.1 586364 R 1355100 CDS YP_008720607.1 556550675 17429370 complement(587965..588855) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 588855 17429370 P423_02725 Escherichia coli JJ1886 hypothetical protein YP_008720607.1 587965 R 1355100 CDS YP_008720608.1 556550676 17429371 complement(588856..591828) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 591828 17429371 P423_02730 Escherichia coli JJ1886 hypothetical protein YP_008720608.1 588856 R 1355100 CDS YP_008720609.1 556550677 17429372 complement(591815..594052) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase family 2 594052 nfrB 17429372 nfrB Escherichia coli JJ1886 glycosyl transferase family 2 YP_008720609.1 591815 R 1355100 CDS YP_008720610.1 556550678 17429373 complement(594202..595644) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor kinase CusS 595644 17429373 P423_02740 Escherichia coli JJ1886 sensor kinase CusS YP_008720610.1 594202 R 1355100 CDS YP_008720611.1 556550679 17429374 complement(595634..596317) 1 NC_022648.1 response regulator in two-component regulatory system with CusS; regulates the copper efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 596317 17429374 P423_02745 Escherichia coli JJ1886 transcriptional regulator YP_008720611.1 595634 R 1355100 CDS YP_008720612.1 556550680 17429375 596474..597856 1 NC_022648.1 with CusA, CusB and CusF is part of a cation efflux system that mediates resistance to copper and silver; Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transporter 597856 17429375 P423_02750 Escherichia coli JJ1886 cation transporter YP_008720612.1 596474 D 1355100 CDS YP_008720613.1 556550681 17429376 597880..598212 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transporter 598212 17429376 P423_02755 Escherichia coli JJ1886 cation transporter YP_008720613.1 597880 D 1355100 CDS YP_008720614.1 556550682 17429377 598228..599451 1 NC_022648.1 with CusA, CusC and CusF is part of a cation efflux system that mediates resistance to copper and silver; Derived by automated computational analysis using gene prediction method: Protein Homology.; metal RND transporter 599451 17429377 P423_02760 Escherichia coli JJ1886 metal RND transporter YP_008720614.1 598228 D 1355100 CDS YP_008720615.1 556550683 17429378 599463..602606 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transporter 602606 17429378 P423_02765 Escherichia coli JJ1886 cation transporter YP_008720615.1 599463 D 1355100 CDS YP_008720616.1 556550684 17429379 602708..604090 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid transporter 604090 17429379 P423_02770 Escherichia coli JJ1886 aromatic amino acid transporter YP_008720616.1 602708 D 1355100 CDS YP_008720617.1 556550685 17429380 complement(604248..605495) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; miniconductance mechanosensitive channel 605495 17429380 P423_02775 Escherichia coli JJ1886 miniconductance mechanosensitive channel YP_008720617.1 604248 R 1355100 CDS YP_008720618.1 556550686 17429381 complement(605603..606256) 1 NC_022648.1 catalyzes the reduction of nitroaromatic compounds such as nitrofurazone, quinones and the anti-tumor agent CB1954; NAD(P)H-dependent; oxygen insensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropteridine reductase 606256 17429381 P423_02780 Escherichia coli JJ1886 dihydropteridine reductase YP_008720618.1 605603 R 1355100 CDS YP_008720619.1 556550687 17429382 complement(606335..606718) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 606718 17429382 P423_02785 Escherichia coli JJ1886 hypothetical protein YP_008720619.1 606335 R 1355100 CDS YP_008720620.1 556550688 17429383 complement(606783..607031) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 607031 17429383 P423_02790 Escherichia coli JJ1886 membrane protein YP_008720620.1 606783 R 1355100 CDS YP_008720621.1 556550689 17429384 complement(607097..608215) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyl:cysteine ligase 608215 17429384 P423_02795 Escherichia coli JJ1886 gamma-glutamyl:cysteine ligase YP_008720621.1 607097 R 1355100 CDS YP_008720622.1 556550690 17429385 608658..608810 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 608810 17429385 P423_02800 Escherichia coli JJ1886 hypothetical protein YP_008720622.1 608658 D 1355100 CDS YP_008720623.1 556550691 17433820 complement(609422..610207) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; short-chain dehydrogenase 610207 17433820 P423_02805 Escherichia coli JJ1886 short-chain dehydrogenase YP_008720623.1 609422 R 1355100 CDS YP_008720624.1 556554318 17429387 complement(610240..611037) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MFS transporter 611037 17429387 P423_02810 Escherichia coli JJ1886 MFS transporter YP_008720624.1 610240 R 1355100 CDS YP_008720625.1 556550692 17429388 complement(611091..612158) 1 NC_022648.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose ABC transporter permease 612158 rbsC 17429388 rbsC Escherichia coli JJ1886 ribose ABC transporter permease YP_008720625.1 611091 R 1355100 CDS YP_008720626.1 556550693 17429389 complement(612176..613720) 1 NC_022648.1 with XylFH is part of the high affinity xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter ATP-binding protein 613720 17429389 P423_02820 Escherichia coli JJ1886 xylose ABC transporter ATP-binding protein YP_008720626.1 612176 R 1355100 CDS YP_008720627.1 556554319 17429390 complement(613722..614342) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 614342 17429390 P423_02825 Escherichia coli JJ1886 hypothetical protein YP_008720627.1 613722 R 1355100 CDS YP_008720628.1 556554320 17429391 complement(614389..615324) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter substrate-binding protein 615324 17429391 P423_02830 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008720628.1 614389 R 1355100 CDS YP_008720629.1 556550694 17429392 complement(615428..616948) 1 NC_022648.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol kinase 616948 glpK 17429392 glpK Escherichia coli JJ1886 glycerol kinase YP_008720629.1 615428 R 1355100 CDS YP_008720630.1 556554321 17429393 complement(617299..618249) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DeoR family transcriptional regulator 618249 17429393 P423_02840 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008720630.1 617299 R 1355100 CDS YP_008720631.1 556554322 17429394 618612..619442 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transketolase 619442 17429394 P423_02845 Escherichia coli JJ1886 transketolase YP_008720631.1 618612 D 1355100 CDS YP_008720632.1 556554323 17429395 619435..620370 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transketolase 620370 17429395 P423_02850 Escherichia coli JJ1886 transketolase YP_008720632.1 619435 D 1355100 CDS YP_008720633.1 556550695 17429396 complement(620372..621040) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 4'-phosphopantetheinyl transferase 621040 17429396 P423_02855 Escherichia coli JJ1886 4'-phosphopantetheinyl transferase YP_008720633.1 620372 R 1355100 CDS YP_008720634.1 556550696 17429397 complement(621206..623446) 1 NC_022648.1 Fep; Cbt; Cbr; FeuB; FepA; PfeA; IroN; BfeA; outer membrane receptor of ferric enterobactin and colicins B and D; interacts with the TonB-ExbBD complex which catalyzes the translocation of the siderophore to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane receptor FepA 623446 17429397 P423_02860 Escherichia coli JJ1886 outer membrane receptor FepA YP_008720634.1 621206 R 1355100 CDS YP_008720635.1 556554324 17429398 623689..624891 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; enterobactin/ferric enterobactin esterase 624891 17429398 P423_02865 Escherichia coli JJ1886 enterobactin/ferric enterobactin esterase YP_008720635.1 623689 D 1355100 CDS YP_008720636.1 556550697 17429399 624894..625112 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 625112 17429399 P423_02870 Escherichia coli JJ1886 hypothetical protein YP_008720636.1 624894 D 1355100 CDS YP_008720637.1 556550698 17429400 625109..628990 1 NC_022648.1 with EntB, EntD, and EntE forms the multienzyme complex enterobactin synthase; EntF is the serine activating enzyme which catalyzes the formation of the amide and ester bonds of the cyclic enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin synthase subunit F 628990 entF 17429400 entF Escherichia coli JJ1886 enterobactin synthase subunit F YP_008720637.1 625109 D 1355100 CDS YP_008720638.1 556550699 17429401 629237..630370 1 NC_022648.1 in Salmonella is responsible for long O-antigen polymerization; may be part of the ferric enterobactin transport system; necessary for enetrobactin uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 630370 17429401 P423_02880 Escherichia coli JJ1886 hypothetical protein YP_008720638.1 629237 D 1355100 CDS YP_008720639.1 556550700 17429402 complement(630367..631182) 1 NC_022648.1 with FepBDE is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter ATP-binding protein 631182 17429402 P423_02885 Escherichia coli JJ1886 iron-enterobactin transporter ATP-binding protein YP_008720639.1 630367 R 1355100 CDS YP_008720640.1 556550701 17429403 complement(631179..632171) 1 NC_022648.1 with FepBCD is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter permease 632171 17429403 P423_02890 Escherichia coli JJ1886 iron-enterobactin transporter permease YP_008720640.1 631179 R 1355100 CDS YP_008720641.1 556550702 17429404 complement(632168..633172) 1 NC_022648.1 with FepBCG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter membrane protein 633172 17429404 P423_02895 Escherichia coli JJ1886 iron-enterobactin transporter membrane protein YP_008720641.1 632168 R 1355100 CDS YP_008720642.1 556550703 17429405 633283..634533 1 NC_022648.1 protein p43; inner membrane protein that exports enterobactin to the periplasmic space; member of the major facilitator superfamily (MFS) of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin exporter EntS 634533 17429405 P423_02900 Escherichia coli JJ1886 enterobactin exporter EntS YP_008720642.1 633283 D 1355100 CDS YP_008720643.1 556550704 17429406 complement(634537..635493) 1 NC_022648.1 with FepCDG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; antibiotic ABC transporter substrate-binding protein 635493 17429406 P423_02905 Escherichia coli JJ1886 antibiotic ABC transporter substrate-binding protein YP_008720643.1 634537 R 1355100 CDS YP_008720644.1 556550705 17429407 635682..636857 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isochorismate synthase EntC 636857 17429407 P423_02910 Escherichia coli JJ1886 isochorismate synthase EntC YP_008720644.1 635682 D 1355100 CDS YP_008720645.1 556550706 17429408 636867..638477 1 NC_022648.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin synthase subunit E 638477 entE 17429408 entE Escherichia coli JJ1886 enterobactin synthase subunit E YP_008720645.1 636867 D 1355100 CDS YP_008720646.1 556550707 17429409 638491..639348 1 NC_022648.1 2,3 dihydro-2,3 dihydroxybenzoate synthase; catalyzes the formation of 2,3 dihydro-2,3 dihydroxybenzoate and pyruvate from isochorismate; with Ent DEF is involved in enterobactin synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; isochorismatase 639348 17429409 P423_02920 Escherichia coli JJ1886 isochorismatase YP_008720646.1 638491 D 1355100 CDS YP_008720647.1 556550708 17429410 639348..640094 1 NC_022648.1 catalyzes the formation of 2,3-dihydroxybenzoate from 2,3-dihydro-2,3-dihydroxybenzoate; involved in the biosynthesis of siderophores, enterobactin, bacillibactin or vibriobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-dihydroxybenzoate-2,3-dehydrogenase 640094 17429410 P423_02925 Escherichia coli JJ1886 2,3-dihydroxybenzoate-2,3-dehydrogenase YP_008720647.1 639348 D 1355100 CDS YP_008720648.1 556550709 17429411 640097..640510 1 NC_022648.1 required for efficient enterobactin production; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 640510 17429411 P423_02930 Escherichia coli JJ1886 acyl-CoA esterase YP_008720648.1 640097 D 1355100 CDS YP_008720649.1 556550710 17429412 640691..642796 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon starvation protein A 642796 17429412 P423_02935 Escherichia coli JJ1886 carbon starvation protein A YP_008720649.1 640691 D 1355100 CDS YP_008720650.1 556550711 17429413 642909..643106 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 643106 17429413 P423_02940 Escherichia coli JJ1886 hypothetical protein YP_008720650.1 642909 D 1355100 CDS YP_008720651.1 556550712 17429414 complement(643116..644204) 1 NC_022648.1 member of the iron-containing alcohol dehydrogenase family; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 644204 17429414 P423_02945 Escherichia coli JJ1886 oxidoreductase YP_008720651.1 643116 R 1355100 CDS YP_008720652.1 556550713 17429415 644313..645473 1 NC_022648.1 catalyzes the transfer of an amino moiety; preference for methionine followed by histidine and phenylalanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase 645473 17429415 P423_02950 Escherichia coli JJ1886 aminotransferase YP_008720652.1 644313 D 1355100 CDS YP_008720653.1 556550714 17429416 complement(645474..646091) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 646091 17429416 P423_02955 Escherichia coli JJ1886 hypothetical protein YP_008720653.1 645474 R 1355100 CDS YP_008720654.1 556550715 17429417 complement(646076..647296) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 647296 17429417 P423_02960 Escherichia coli JJ1886 hypothetical protein YP_008720654.1 646076 R 1355100 CDS YP_008720655.1 556550716 17429418 complement(647443..648345) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 648345 17429418 P423_02965 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008720655.1 647443 R 1355100 CDS YP_008720656.1 556550717 17429419 complement(648550..649296) 1 NC_022648.1 Involved in disulfide bond formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; disulfide isomerase 649296 dsbG 17429419 dsbG Escherichia coli JJ1886 disulfide isomerase YP_008720656.1 648550 R 1355100 CDS YP_008720657.1 556550718 17429420 649668..650231 1 NC_022648.1 with AhpF catalyzes the conversion of alkyl hydroperoxides to their corresponding alcohols; AhpC reduced the hydroperoxide substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; alkyl hydroperoxide reductase subunit C 650231 17429420 P423_02975 Escherichia coli JJ1886 alkyl hydroperoxide reductase subunit C YP_008720657.1 649668 D 1355100 CDS YP_008720658.1 556554325 17429421 complement(650287..650403) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 650403 17429421 P423_02980 Escherichia coli JJ1886 hypothetical protein YP_008720658.1 650287 R 1355100 CDS YP_008720659.1 556550719 17429422 650402..651967 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alkyl hydroperoxide reductase subunit F 651967 17429422 P423_02985 Escherichia coli JJ1886 alkyl hydroperoxide reductase subunit F YP_008720659.1 650402 D 1355100 CDS YP_008720660.1 556550720 17429423 complement(652088..652516) 1 NC_022648.1 interacts with GroEL; is induced by starvation, heat shock and toxic agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein G 652516 17429423 P423_02990 Escherichia coli JJ1886 universal stress protein G YP_008720660.1 652088 R 1355100 CDS YP_008720661.1 556550721 17429424 complement(652872..653282) 1 NC_022648.1 Regulates the synthesis of nucleoside triphosphates for nucleic acid synthesis, CTP for lipid synthesis, and GTP for protein elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside diphosphate kinase regulator 653282 17429424 P423_02995 Escherichia coli JJ1886 nucleoside diphosphate kinase regulator YP_008720661.1 652872 R 1355100 CDS YP_008720662.1 556550722 17429425 complement(653512..654318) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease I 654318 17429425 P423_03000 Escherichia coli JJ1886 ribonuclease I YP_008720662.1 653512 R 1355100 CDS YP_008720663.1 556550723 17429426 complement(654432..655895) 1 NC_022648.1 involved in the transport of citrate into the cell along with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 655895 17429426 P423_03005 Escherichia coli JJ1886 antiporter YP_008720663.1 654432 R 1355100 CDS YP_008720664.1 556550724 17429427 complement(655946..656824) 1 NC_022648.1 catalyzes the formation of 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA from ATP and 3-dephospho-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; triphosphoribosyl-dephospho-CoA synthase 656824 citG 17429427 citG Escherichia coli JJ1886 triphosphoribosyl-dephospho-CoA synthase YP_008720664.1 655946 R 1355100 CDS YP_008720665.1 556550725 17429428 complement(656799..657350) 1 NC_022648.1 2'-(5''-phosphoribosyl)-3'-dephospho-CoA transferase; holo-citrate lyase synthase; CitG forms the prosthetic group precursor 2'-(5''-triphosphoribosyl)-3'-dephospho-CoA which is then transferred to apo-ACP by CitX to produce holo-ACP and pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase 657350 citX 17429428 citX Escherichia coli JJ1886 2-(5''-triphosphoribosyl)-3'-dephospho-CoA synthase YP_008720665.1 656799 R 1355100 CDS YP_008720666.1 556550726 17429429 complement(657354..658886) 1 NC_022648.1 citrate-ACP transferase, the alpha subunit catalyzes the formation of (3S)-citryl-CoA from acetyl-CoA and citrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate lyase subunit alpha 658886 17429429 P423_03020 Escherichia coli JJ1886 citrate lyase subunit alpha YP_008720666.1 657354 R 1355100 CDS YP_008720667.1 556550727 17429430 complement(658897..659805) 1 NC_022648.1 citryl-ACP lyase; catalyzes the formation of acetate and oxaloacetate from citrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate lyase subunit beta 659805 17429430 P423_03025 Escherichia coli JJ1886 citrate lyase subunit beta YP_008720667.1 658897 R 1355100 CDS YP_008720668.1 556550728 17429431 complement(659802..660098) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate lyase subunit gamma 660098 17429431 P423_03030 Escherichia coli JJ1886 citrate lyase subunit gamma YP_008720668.1 659802 R 1355100 CDS YP_008720669.1 556550729 17429432 complement(660113..661171) 1 NC_022648.1 activates citrate lyase by acetylation of the gamma subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; [citrate [pro-3S]-lyase] ligase 661171 17429432 P423_03035 Escherichia coli JJ1886 [citrate [pro-3S]-lyase] ligase YP_008720669.1 660113 R 1355100 CDS YP_008720670.1 556550730 17429433 661551..663209 1 NC_022648.1 regulates the expression of citrate fermentation genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor histidine kinase DpiB 663209 dpiB 17429433 dpiB Escherichia coli JJ1886 sensor histidine kinase DpiB YP_008720670.1 661551 D 1355100 CDS YP_008720671.1 556550731 17429434 663178..663858 1 NC_022648.1 regulates the expression of citrate fermentation genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; two-protein response regulator DpiA 663858 dpiA 17429434 dpiA Escherichia coli JJ1886 two-protein response regulator DpiA YP_008720671.1 663178 D 1355100 CDS YP_008720672.1 556550732 17429435 complement(663899..665284) 1 NC_022648.1 responsible for the transport of C4-dicarboxylates during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 665284 dcuC 17429435 dcuC Escherichia coli JJ1886 C4-dicarboxylate ABC transporter YP_008720672.1 663899 R 1355100 CDS YP_008720673.1 556550733 17429436 665871..666431 1 NC_022648.1 catalyzes the transfer of palmitate to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipid:lipid A palmitoyltransferase 666431 pagP 17429436 pagP Escherichia coli JJ1886 phospholipid:lipid A palmitoyltransferase YP_008720673.1 665871 D 1355100 CDS YP_008720674.1 556550734 17429437 666606..666815 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA chaperone/anti-terminator 666815 17429437 P423_03060 Escherichia coli JJ1886 RNA chaperone/anti-terminator YP_008720674.1 666606 D 1355100 CDS YP_008720675.1 556550735 17429438 complement(666869..667252) 1 NC_022648.1 camphor resistance protein CrcB; may be involved in chromosome condensation; overexpression in Escherichia coli protects against decondensation by camphor; overexpressing the protein results in an increase in supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.; camphor resistance protein CrcB 667252 17429438 P423_03065 Escherichia coli JJ1886 camphor resistance protein CrcB YP_008720675.1 666869 R 1355100 CDS YP_008720676.1 556550736 17429439 667345..668133 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 668133 17429439 P423_03070 Escherichia coli JJ1886 hydrolase YP_008720676.1 667345 D 1355100 CDS YP_008720677.1 556550737 17429440 668262..668465 1 NC_022648.1 TatE; similar to TatA and found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit TatE 668465 tatE 17429440 tatE Escherichia coli JJ1886 preprotein translocase subunit TatE YP_008720677.1 668262 D 1355100 CDS YP_008720678.1 556550738 17429441 complement(668565..669530) 1 NC_022648.1 catalyzes the radical-mediated insertion of two sulfur atoms into an acyl carrier protein (ACP) bound to an octanoyl group to produce a lipoyl group; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoyl synthase 669530 17429441 P423_03080 Escherichia coli JJ1886 lipoyl synthase YP_008720678.1 668565 R 1355100 CDS YP_008720679.1 556550739 17429443 complement(670555..671196) 1 NC_022648.1 lipoyl/octanoyltransferase; catalyzes the transfer of the lipoyl/octanoyl moiety of lipoyl/octanoyl-ACP onto lipoate-dependent enzymes like pyruvate dehydrogenase and the glycine cleavage system H protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoate-protein ligase B 671196 17429443 P423_03090 Escherichia coli JJ1886 lipoate-protein ligase B YP_008720679.1 670555 R 1355100 CDS YP_008720680.1 556550740 17429444 complement(671297..671560) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 671560 17429444 P423_03095 Escherichia coli JJ1886 hypothetical protein YP_008720680.1 671297 R 1355100 CDS YP_008720681.1 556550741 17429445 complement(671670..672881) 1 NC_022648.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 672881 17429445 P423_03100 Escherichia coli JJ1886 D-alanyl-D-alanine carboxypeptidase YP_008720681.1 671670 R 1355100 CDS YP_008720682.1 556550742 17429446 complement(673021..674109) 1 NC_022648.1 septal ring protein, suppressor of prc, minor lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.; rare lipoprotein A 674109 17429446 P423_03105 Escherichia coli JJ1886 rare lipoprotein A YP_008720682.1 673021 R 1355100 CDS YP_008720683.1 556550743 17429447 complement(674120..675232) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell wall shape-determining protein 675232 17429447 P423_03110 Escherichia coli JJ1886 cell wall shape-determining protein YP_008720683.1 674120 R 1355100 CDS YP_008720684.1 556550744 17429448 complement(675235..677136) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein 2 677136 17429448 P423_03115 Escherichia coli JJ1886 penicillin-binding protein 2 YP_008720684.1 675235 R 1355100 CDS YP_008720685.1 556550745 17429449 complement(677167..677634) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S rRNA methyltransferase 677634 17429449 P423_03120 Escherichia coli JJ1886 50S rRNA methyltransferase YP_008720685.1 677167 R 1355100 CDS YP_008720686.1 556550746 17429450 complement(677638..677955) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-associated protein 677955 17429450 P423_03125 Escherichia coli JJ1886 ribosome-associated protein YP_008720686.1 677638 R 1355100 CDS YP_008720687.1 556550747 17429451 complement(678215..678826) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ribazole phosphatase 678826 17429451 P423_03130 Escherichia coli JJ1886 alpha-ribazole phosphatase YP_008720687.1 678215 R 1355100 CDS YP_008720688.1 556550748 17429452 complement(678850..679491) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinic acid mononucleotide adenylyltransferase 679491 17429452 P423_03135 Escherichia coli JJ1886 nicotinic acid mononucleotide adenylyltransferase YP_008720688.1 678850 R 1355100 CDS YP_008720689.1 556550749 17429453 complement(679493..680524) 1 NC_022648.1 required for the assembly and function of the DNAX complex which is required for the assembly of the beta subunit onto primed DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit delta 680524 holA 17429453 holA Escherichia coli JJ1886 DNA polymerase III subunit delta YP_008720689.1 679493 R 1355100 CDS YP_008720690.1 556550750 17429454 complement(680524..681105) 1 NC_022648.1 rare lipoprotein B; involved in the assembly of LPS in the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; LPS-assembly lipoprotein RlpB 681105 17429454 P423_03145 Escherichia coli JJ1886 LPS-assembly lipoprotein RlpB YP_008720690.1 680524 R 1355100 CDS YP_008720691.1 556550751 17429455 complement(681120..683702) 1 NC_022648.1 leucine--tRNA ligase; LeuRS; class-I aminoacyl-tRNA synthetase; charges leucine by linking carboxyl group to alpha-phosphate of ATP and then transfers aminoacyl-adenylate to its tRNA; due to the large number of codons that tRNA(Leu) recognizes, the leucyl-tRNA synthetase does not recognize the anticodon loop of the tRNA, but instead recognition is dependent on a conserved discriminator base A37 and a long arm; an editing domain hydrolyzes misformed products; in Methanothermobacter thermautotrophicus this enzyme associates with prolyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucyl-tRNA synthetase 683702 leuS 17429455 leuS Escherichia coli JJ1886 leucyl-tRNA synthetase YP_008720691.1 681120 R 1355100 CDS YP_008720692.1 556550752 17429456 683937..684419 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 684419 17429456 P423_03155 Escherichia coli JJ1886 hypothetical protein YP_008720692.1 683937 D 1355100 CDS YP_008720693.1 556554326 17429457 complement(684669..684887) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 684887 17429457 P423_03160 Escherichia coli JJ1886 hypothetical protein YP_008720693.1 684669 R 1355100 CDS YP_008720694.1 556550753 17429458 complement(684964..685518) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 685518 17429458 P423_03165 Escherichia coli JJ1886 hypothetical protein YP_008720694.1 684964 R 1355100 CDS YP_008720695.1 556550754 17429459 685620..686327 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 686327 17429459 P423_03170 Escherichia coli JJ1886 hypothetical protein YP_008720695.1 685620 D 1355100 CDS YP_008720696.1 556550755 17429460 complement(687835..689505) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone HscC 689505 17429460 P423_03175 Escherichia coli JJ1886 molecular chaperone HscC YP_008720696.1 687835 R 1355100 CDS YP_008720697.1 556550756 17429461 complement(689589..690524) 1 NC_022648.1 Hydrolyzes with equal efficiency cytidine or uridine to ribose and cytosine or uracil, respectively; pyrimidine-specific; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside hydrolase 690524 rihA 17429461 rihA Escherichia coli JJ1886 ribonucleoside hydrolase YP_008720697.1 689589 R 1355100 CDS YP_008720698.1 556550757 17429462 complement(690642..691367) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter ATP-binding protein 691367 17429462 P423_03185 Escherichia coli JJ1886 amino acid ABC transporter ATP-binding protein YP_008720698.1 690642 R 1355100 CDS YP_008720699.1 556550758 17429463 complement(691367..692041) 1 NC_022648.1 with GltJLPS and GadC for glutamate and GltJLP, DctA and DcuAB for aspartate is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate/aspartate transporter permease GltK 692041 17429463 P423_03190 Escherichia coli JJ1886 glutamate/aspartate transporter permease GltK YP_008720699.1 691367 R 1355100 CDS YP_008720700.1 556550759 17429464 complement(692041..692781) 1 NC_022648.1 with GltIKL is involved in the transport of glutamate and aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate/aspartate ABC transporter permease GltJ 692781 17429464 P423_03195 Escherichia coli JJ1886 glutamate/aspartate ABC transporter permease GltJ YP_008720700.1 692041 R 1355100 CDS YP_008720701.1 556550760 17429465 complement(692951..693859) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid transporter 693859 17429465 P423_03200 Escherichia coli JJ1886 amino acid transporter YP_008720701.1 692951 R 1355100 CDS YP_008720702.1 556554327 17429466 694313..696190 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 696190 17429466 P423_03205 Escherichia coli JJ1886 hypothetical protein YP_008720702.1 694313 D 1355100 CDS YP_008720703.1 556550761 17429467 complement(696241..696333) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 696333 17429467 P423_03210 Escherichia coli JJ1886 hypothetical protein YP_008720703.1 696241 R 1355100 CDS YP_008720704.1 556550762 17429468 complement(696317..697855) 1 NC_022648.1 Transfers the fatty acyl group on membrane lipoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; apolipoprotein N-acyltransferase 697855 lnt 17429468 lnt Escherichia coli JJ1886 apolipoprotein N-acyltransferase YP_008720704.1 696317 R 1355100 CDS YP_008720705.1 556550763 17429469 complement(697880..698758) 1 NC_022648.1 involved in the transport of magnesium and cobalt ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt transporter 698758 17429469 P423_03220 Escherichia coli JJ1886 cobalt transporter YP_008720705.1 697880 R 1355100 CDS YP_008720706.1 556550764 17429470 complement(698848..699315) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metal-binding heat shock protein 699315 17429470 P423_03225 Escherichia coli JJ1886 metal-binding heat shock protein YP_008720706.1 698848 R 1355100 CDS YP_008720707.1 556550765 17429471 complement(699312..700352) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate hydrolase 700352 17429471 P423_03230 Escherichia coli JJ1886 nucleoside triphosphate hydrolase YP_008720707.1 699312 R 1355100 CDS YP_008720708.1 556550766 17429472 complement(700505..701929) 1 NC_022648.1 catalyzes the formation of 2-methylthio-N6-(dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine from N6-(dimethylallyl)adenosine (i(6)A); Derived by automated computational analysis using gene prediction method: Protein Homology.; (dimethylallyl)adenosine tRNA methylthiotransferase 701929 17429472 P423_03235 Escherichia coli JJ1886 (dimethylallyl)adenosine tRNA methylthiotransferase YP_008720708.1 700505 R 1355100 CDS YP_008720709.1 556550767 17429473 702075..703250 1 NC_022648.1 catalyzes the formation of 2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinol from 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol; functions in the biosynthesis of ubiquinone or coenzyme Q; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase 703250 ubiF 17429473 ubiF Escherichia coli JJ1886 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase YP_008720709.1 702075 D 1355100 CDS YP_008720710.1 556554328 17429481 704444..704881 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 704881 17429481 P423_03280 Escherichia coli JJ1886 hypothetical protein YP_008720710.1 704444 D 1355100 CDS YP_008720711.1 556550768 17429482 complement(704923..706587) 1 NC_022648.1 functions in asparagine biosynthesis; converts glutamine, aspartate, ATP, and water to glutamate, asparagine, pyrophosphate and AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; asparagine synthetase B 706587 asnB 17429482 asnB Escherichia coli JJ1886 asparagine synthetase B YP_008720711.1 704923 R 1355100 CDS YP_008720712.1 556550769 17429483 complement(706843..707595) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UMP phosphatase 707595 17429483 P423_03290 Escherichia coli JJ1886 UMP phosphatase YP_008720712.1 706843 R 1355100 CDS YP_008720713.1 556550770 17429484 complement(707643..708863) 1 NC_022648.1 regulates the synthesis of glucosamine and N-acetylglucosamine by acting as a repressor of the nagEBACD operon and both a repressor and activator of the glmSU operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 708863 17429484 P423_03295 Escherichia coli JJ1886 transcriptional regulator YP_008720713.1 707643 R 1355100 CDS YP_008720714.1 556550771 17429485 complement(708872..710020) 1 NC_022648.1 catalyzes the formation of glucosamine 6-phosphate from N-acetylglucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylglucosamine-6-phosphate deacetylase 710020 nagA 17429485 nagA Escherichia coli JJ1886 N-acetylglucosamine-6-phosphate deacetylase YP_008720714.1 708872 R 1355100 CDS YP_008720715.1 556550772 17429486 complement(710080..710880) 1 NC_022648.1 catalyzes the reversible formation of fructose 6-phosphate from glucosamine 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosamine-6-phosphate deaminase 710880 nagB 17429486 nagB Escherichia coli JJ1886 glucosamine-6-phosphate deaminase YP_008720715.1 710080 R 1355100 CDS YP_008720716.1 556550773 17429487 711213..713159 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylglucosamine transporter subunit IIABC 713159 17429487 P423_03310 Escherichia coli JJ1886 PTS N-acetylglucosamine transporter subunit IIABC YP_008720716.1 711213 D 1355100 CDS YP_008720717.1 556554329 17429488 complement(713248..714528) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; citrate transporter 714528 17429488 P423_03315 Escherichia coli JJ1886 citrate transporter YP_008720717.1 713248 R 1355100 CDS YP_008720718.1 556550774 17429489 complement(714542..715012) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Toxin-antitoxin biofilm protein TabA 715012 17429489 P423_03320 Escherichia coli JJ1886 Toxin-antitoxin biofilm protein TabA YP_008720718.1 714542 R 1355100 CDS YP_008720719.1 556554330 17429490 complement(715009..716178) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl hydrolase 716178 17429490 P423_03325 Escherichia coli JJ1886 glycosyl hydrolase YP_008720719.1 715009 R 1355100 CDS YP_008720720.1 556550775 17429491 complement(716214..716972) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 716972 17429491 P423_03330 Escherichia coli JJ1886 membrane protein YP_008720720.1 716214 R 1355100 CDS YP_008720721.1 556554331 17429492 complement(717032..717919) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dihydrodipicolinate synthetase 717919 17429492 P423_03335 Escherichia coli JJ1886 dihydrodipicolinate synthetase YP_008720721.1 717032 R 1355100 CDS YP_008720722.1 556554332 17429493 complement(717923..718999) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DhaT 718999 17429493 P423_03340 Escherichia coli JJ1886 DhaT YP_008720722.1 717923 R 1355100 CDS YP_008720723.1 556554333 17429494 719250..720485 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 720485 17429494 P423_03345 Escherichia coli JJ1886 membrane protein YP_008720723.1 719250 D 1355100 CDS YP_008720724.1 556550776 17429495 720478..721464 1 NC_022648.1 catalyzes oxidation of 4-(phosphohydroxy)-L-threonine into 2-amino-3-oxo-4-(phosphohydroxy)butyric acid which decarboxylates to form 1-amino-3-(phosphohydroxy)propan-2-one (3-amino-2-oxopropyl phosphate); Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxythreonine-4-phosphate dehydrogenase 721464 pdxA 17429495 pdxA Escherichia coli JJ1886 4-hydroxythreonine-4-phosphate dehydrogenase YP_008720724.1 720478 D 1355100 CDS YP_008720725.1 556554334 17429496 721496..722227 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DeoR family transcriptional regulator 722227 17429496 P423_03355 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008720725.1 721496 D 1355100 CDS YP_008720726.1 556550777 17429497 722447..724111 1 NC_022648.1 catalyzes a two-step reaction, first charging a glutamine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminyl-tRNA synthetase 724111 17429497 P423_03360 Escherichia coli JJ1886 glutaminyl-tRNA synthetase YP_008720726.1 722447 D 1355100 CDS YP_008720727.1 556554335 17429498 complement(724257..724343) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 724343 17429498 P423_03365 Escherichia coli JJ1886 hypothetical protein YP_008720727.1 724257 R 1355100 CDS YP_008720728.1 556550778 17429499 724553..725959 1 NC_022648.1 outer membrane porin involved in the transport of chitooligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.; chitoporin 725959 chiP 17429499 chiP Escherichia coli JJ1886 chitoporin YP_008720728.1 724553 D 1355100 CDS YP_008720729.1 556550779 17429500 726009..726335 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 726335 17429500 P423_03375 Escherichia coli JJ1886 hypothetical protein YP_008720729.1 726009 D 1355100 CDS YP_008720730.1 556550780 17429501 complement(726419..726865) 1 NC_022648.1 negatively regulates a number of operons that encode enzymes involved in iron transport; activated by manganese; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferric uptake regulator 726865 fur 17429501 fur Escherichia coli JJ1886 ferric uptake regulator YP_008720730.1 726419 R 1355100 CDS YP_008720731.1 556550781 17429502 complement(727154..727684) 1 NC_022648.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavodoxin 727684 17429502 P423_03385 Escherichia coli JJ1886 flavodoxin YP_008720731.1 727154 R 1355100 CDS YP_008720732.1 556550782 17429503 complement(727824..728186) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LexA regulated protein 728186 17429503 P423_03390 Escherichia coli JJ1886 LexA regulated protein YP_008720732.1 727824 R 1355100 CDS YP_008720733.1 556550783 17429504 complement(728257..729021) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 729021 17429504 P423_03395 Escherichia coli JJ1886 acyl-CoA esterase YP_008720733.1 728257 R 1355100 CDS YP_008720734.1 556550784 17429505 729206..729751 1 NC_022648.1 negative modulator of the initiation of chromosome replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; replication initiation regulator SeqA 729751 17429505 P423_03400 Escherichia coli JJ1886 replication initiation regulator SeqA YP_008720734.1 729206 D 1355100 CDS YP_008720735.1 556550785 17429506 729777..731417 1 NC_022648.1 catalyzes the interconversion of alpha-D-glucose 1-phosphate to alpha-D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglucomutase 731417 17429506 P423_03405 Escherichia coli JJ1886 phosphoglucomutase YP_008720735.1 729777 D 1355100 CDS YP_008720736.1 556550786 17429507 complement(731474..732793) 1 NC_022648.1 catalyzes the uptake of putrescine via a proton symport mechanism, as well as the efflux of putrescine by a putrescine/ornithine antiport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine transporter 732793 potE 17429507 potE Escherichia coli JJ1886 putrescine transporter YP_008720736.1 731474 R 1355100 CDS YP_008720737.1 556550787 17429508 complement(732790..734997) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine decarboxylase 734997 17429508 P423_03415 Escherichia coli JJ1886 ornithine decarboxylase YP_008720737.1 732790 R 1355100 CDS YP_008720738.1 556550788 17429509 complement(735677..736354) 1 NC_022648.1 response regulator in two-component regulatory system with KdpD; regulates the kdp operon involved in potassium transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 736354 17429509 P423_03420 Escherichia coli JJ1886 transcriptional regulator YP_008720738.1 735677 R 1355100 CDS YP_008720739.1 556550789 17429510 complement(736351..739035) 1 NC_022648.1 sensory histidine kinase in two-component regulatory system with KdpE; signal sensing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein KdpD 739035 17429510 P423_03425 Escherichia coli JJ1886 sensor protein KdpD YP_008720739.1 736351 R 1355100 CDS YP_008720740.1 556550790 17429511 complement(739028..739600) 1 NC_022648.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP)system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions. The C subunit may be involved in assembly of the KDP complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium-transporting ATPase subunit C 739600 17429511 P423_03430 Escherichia coli JJ1886 potassium-transporting ATPase subunit C YP_008720740.1 739028 R 1355100 CDS YP_008720741.1 556550791 17429512 complement(739609..741657) 1 NC_022648.1 One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium-transporting ATPase subunit B 741657 17429512 P423_03435 Escherichia coli JJ1886 potassium-transporting ATPase subunit B YP_008720741.1 739609 R 1355100 CDS YP_008720742.1 556550792 17429513 complement(741680..743353) 1 NC_022648.1 catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium-transporting ATPase subunit A 743353 17429513 P423_03440 Escherichia coli JJ1886 potassium-transporting ATPase subunit A YP_008720742.1 741680 R 1355100 CDS YP_008720743.1 556554336 17429514 complement(743353..743442) 1 NC_022648.1 one of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; potassium transporter TrkA 743442 kdpF 17429514 kdpF Escherichia coli JJ1886 potassium transporter TrkA YP_008720743.1 743353 R 1355100 CDS YP_008720744.1 556550793 17429515 743755..743961 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 743961 17429515 P423_03450 Escherichia coli JJ1886 hypothetical protein YP_008720744.1 743755 D 1355100 CDS YP_008720745.1 556550794 17429516 744062..744571 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 744571 17429516 P423_03455 Escherichia coli JJ1886 hypothetical protein YP_008720745.1 744062 D 1355100 CDS YP_008720746.1 556550795 17429517 744568..745986 1 NC_022648.1 UV-induced DNA repair; converts cyclobutane-type pyrimidine dimers created during exposure to UV ratiation to monomers; light dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribodipyrimidine photolyase 745986 17429517 P423_03460 Escherichia coli JJ1886 deoxyribodipyrimidine photolyase YP_008720746.1 744568 D 1355100 CDS YP_008720747.1 556550796 17429518 complement(746028..747509) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 747509 17429518 P423_03465 Escherichia coli JJ1886 peptide ABC transporter permease YP_008720747.1 746028 R 1355100 CDS YP_008720748.1 556550797 17429519 747780..748523 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metal-binding protein 748523 17429519 P423_03470 Escherichia coli JJ1886 metal-binding protein YP_008720748.1 747780 D 1355100 CDS YP_008720749.1 556550798 17429520 748546..749202 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 749202 17429520 P423_03475 Escherichia coli JJ1886 hypothetical protein YP_008720749.1 748546 D 1355100 CDS YP_008720750.1 556550799 17429521 749196..750128 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 750128 17429521 P423_03480 Escherichia coli JJ1886 hypothetical protein YP_008720750.1 749196 D 1355100 CDS YP_008720751.1 556550800 17429522 750118..750852 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LamB/YcsF family protein 750852 17429522 P423_03485 Escherichia coli JJ1886 LamB/YcsF family protein YP_008720751.1 750118 D 1355100 CDS YP_008720752.1 556550801 17429523 750888..751679 1 NC_022648.1 5-formyluracil/5-hydroxymethyluracil DNA glycosylase; involved in base excision repair of DNA damaged by oxidation or by mutagenic agents; acts as DNA glycosylase that recognizes and removes damaged bases with a preference for oxidized pyrimidines; has apurinic/apyrimidinic lyase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease SymE 751679 17429523 P423_03490 Escherichia coli JJ1886 endoribonuclease SymE YP_008720752.1 750888 D 1355100 CDS YP_008720753.1 556550802 17429524 complement(751676..752722) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AbrB family transcriptional regulator 752722 17429524 P423_03495 Escherichia coli JJ1886 AbrB family transcriptional regulator YP_008720753.1 751676 R 1355100 CDS YP_008720754.1 556554337 17429525 complement(752902..753615) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GntR family transcriptional regulator 753615 17429525 P423_03500 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008720754.1 752902 R 1355100 CDS YP_008720755.1 556554338 17429526 753879..754565 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; demethylmenaquinone methyltransferase 754565 17429526 P423_03505 Escherichia coli JJ1886 demethylmenaquinone methyltransferase YP_008720755.1 753879 D 1355100 CDS YP_008720756.1 556550803 17429527 754578..755591 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate oxidoreductase 755591 17429527 P423_03510 Escherichia coli JJ1886 galactonate oxidoreductase YP_008720756.1 754578 D 1355100 CDS YP_008720757.1 556554339 17429528 755603..756358 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 3-oxoacyl-ACP reductase 756358 17429528 P423_03515 Escherichia coli JJ1886 3-oxoacyl-ACP reductase YP_008720757.1 755603 D 1355100 CDS YP_008720758.1 556554340 17429529 756373..756684 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hydrolase 756684 17429529 P423_03520 Escherichia coli JJ1886 hydrolase YP_008720758.1 756373 D 1355100 CDS YP_008720759.1 556554341 17429530 756684..757880 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hydrolase 757880 17429530 P423_03525 Escherichia coli JJ1886 hydrolase YP_008720759.1 756684 D 1355100 CDS YP_008720760.1 556554342 17429531 757908..758876 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter 758876 17429531 P423_03530 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter YP_008720760.1 757908 D 1355100 CDS YP_008720761.1 556554343 17429532 758936..759397 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter permease 759397 17429532 P423_03535 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter permease YP_008720761.1 758936 D 1355100 CDS YP_008720762.1 556554344 17429533 759397..760707 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter 760707 17429533 P423_03540 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter YP_008720762.1 759397 D 1355100 CDS YP_008720763.1 556550804 17429534 complement(760754..762037) 1 NC_022648.1 type II enzyme; in Escherichia coli this enzyme forms a trimer of dimers which is allosterically inhibited by NADH and competitively inhibited by alpha-ketoglutarate; allosteric inhibition is lost when Cys206 is chemically modified which also affects hexamer formation; forms oxaloacetate and acetyl-CoA and water from citrate and coenzyme A; functions in TCA cycle, glyoxylate cycle and respiration; enzyme from Helicobacter pylori is not inhibited by NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; type II citrate synthase 762037 gltA 17429534 gltA Escherichia coli JJ1886 type II citrate synthase YP_008720763.1 760754 R 1355100 CDS YP_008720764.1 556550805 17429535 762731..763135 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase cytochrome b556 large membrane subunit 763135 sdhC 17429535 sdhC Escherichia coli JJ1886 succinate dehydrogenase cytochrome b556 large membrane subunit YP_008720764.1 762731 D 1355100 CDS YP_008720765.1 556550806 17429536 763129..763476 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase cytochrome b556 small membrane subunit 763476 sdhD 17429536 sdhD Escherichia coli JJ1886 succinate dehydrogenase cytochrome b556 small membrane subunit YP_008720765.1 763129 D 1355100 CDS YP_008720766.1 556550807 17429537 763476..765242 1 NC_022648.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase flavoprotein subunit 765242 sdhA 17429537 sdhA Escherichia coli JJ1886 succinate dehydrogenase flavoprotein subunit YP_008720766.1 763476 D 1355100 CDS YP_008720767.1 556550808 17429538 765258..765974 1 NC_022648.1 part of four member succinate dehydrogenase enzyme complex that forms a trimeric complex (trimer of tetramers); SdhA/B are the catalytic subcomplex and can exhibit succinate dehydrogenase activity in the absence of SdhC/D which are the membrane components and form cytochrome b556; SdhC binds ubiquinone; oxidizes succinate to fumarate while reducing ubiquinone to ubiquinol; the catalytic subunits are similar to fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase iron-sulfur subunit 765974 sdhB 17429538 sdhB Escherichia coli JJ1886 succinate dehydrogenase iron-sulfur subunit YP_008720767.1 765258 D 1355100 CDS YP_008720768.1 556550809 17429539 766336..769137 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-oxoglutarate dehydrogenase E1 769137 17429539 P423_03570 Escherichia coli JJ1886 2-oxoglutarate dehydrogenase E1 YP_008720768.1 766336 D 1355100 CDS YP_008720769.1 556550810 17429540 769152..770369 1 NC_022648.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide succinyltransferase 770369 17429540 P423_03575 Escherichia coli JJ1886 dihydrolipoamide succinyltransferase YP_008720769.1 769152 D 1355100 CDS YP_008720770.1 556550811 17429541 770463..771629 1 NC_022648.1 catalyzes the interconversion of succinyl-CoA and succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate--CoA ligase subunit beta 771629 sucC 17429541 sucC Escherichia coli JJ1886 malate--CoA ligase subunit beta YP_008720770.1 770463 D 1355100 CDS YP_008720771.1 556550812 17429542 771629..772498 1 NC_022648.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyl-CoA synthetase subunit alpha 772498 17429542 P423_03585 Escherichia coli JJ1886 succinyl-CoA synthetase subunit alpha YP_008720771.1 771629 D 1355100 CDS YP_008720772.1 556550813 17429543 complement(772602..773324) 1 NC_022648.1 regulates the succiny-lCoA synthetase operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 773324 17429543 P423_03590 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008720772.1 772602 R 1355100 CDS YP_008720773.1 556550814 17429544 773457..775409 1 NC_022648.1 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 775409 17429544 P423_03595 Escherichia coli JJ1886 PTS fructose transporter subunit IIB YP_008720773.1 773457 D 1355100 CDS YP_008720774.1 556550815 17429545 775427..778060 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-mannosidase 778060 17429545 P423_03600 Escherichia coli JJ1886 alpha-mannosidase YP_008720774.1 775427 D 1355100 CDS YP_008720775.1 556554345 17429546 778258..779451 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 779451 17429546 P423_03605 Escherichia coli JJ1886 hypothetical protein YP_008720775.1 778258 D 1355100 CDS YP_008720776.1 556554346 17429547 779656..779841 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 779841 17429547 P423_03610 Escherichia coli JJ1886 hypothetical protein YP_008720776.1 779656 D 1355100 CDS YP_008720777.1 556550816 17429548 780994..782562 1 NC_022648.1 part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit I 782562 17429548 P423_03615 Escherichia coli JJ1886 cytochrome BD oxidase subunit I YP_008720777.1 780994 D 1355100 CDS YP_008720778.1 556550817 17429549 782578..783717 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit II 783717 17429549 P423_03620 Escherichia coli JJ1886 cytochrome BD oxidase subunit II YP_008720778.1 782578 D 1355100 CDS YP_008720779.1 556550818 17429550 783732..783845 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 783845 17429550 P423_03625 Escherichia coli JJ1886 hypothetical protein YP_008720779.1 783732 D 1355100 CDS YP_008720780.1 556550819 17429551 783845..784138 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 784138 17429551 P423_03630 Escherichia coli JJ1886 hypothetical protein YP_008720780.1 783845 D 1355100 CDS YP_008720781.1 556550820 17429552 784288..784692 1 NC_022648.1 catalyzes the hydrolysis of short chain aliphatic acyl-CoA thioesters; physiological role remains unknown; involved in phospholipid metabolism; part of the Tol/Pal system of proteins that are critical for maintaining the integrity of the cell envelope components; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 784692 17429552 P423_03635 Escherichia coli JJ1886 acyl-CoA thioesterase YP_008720781.1 784288 D 1355100 CDS YP_008720782.1 556550821 17429553 784689..785381 1 NC_022648.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.; colicin transporter 785381 17429553 P423_03640 Escherichia coli JJ1886 colicin transporter YP_008720782.1 784689 D 1355100 CDS YP_008720783.1 556550822 17429554 785385..785813 1 NC_022648.1 membrane spanning protein in TolA-TolQ-TolR complex; involved in the tonB-independent uptake of group A colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.; colicin transporter 785813 17429554 P423_03645 Escherichia coli JJ1886 colicin transporter YP_008720783.1 785385 D 1355100 CDS YP_008720784.1 556550823 17429555 785878..787188 1 NC_022648.1 inner membrane component of 7 member Tol-Pal envelope-spanning complex; involved in maintaining cell envelope integrity; utilized by colicins and filamentous phages for import; interacts with TolB, Pal, and through TolB to various outer membrane porins; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell envelope integrity inner membrane protein TolA 787188 tolA 17429555 tolA Escherichia coli JJ1886 cell envelope integrity inner membrane protein TolA YP_008720784.1 785878 D 1355100 CDS YP_008720785.1 556550824 17429556 787321..788613 1 NC_022648.1 forms dimers; may be involved in cell envelope integrity; interacts with outer membrane proteins and with the C-terminal domain of inner membrane protein TolA; Derived by automated computational analysis using gene prediction method: Protein Homology.; translocation protein TolB 788613 tolB 17429556 tolB Escherichia coli JJ1886 translocation protein TolB YP_008720785.1 787321 D 1355100 CDS YP_008720786.1 556550825 17429557 788648..789169 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidoglycan-associated outer membrane lipoprotein 789169 17429557 P423_03660 Escherichia coli JJ1886 peptidoglycan-associated outer membrane lipoprotein YP_008720786.1 788648 D 1355100 CDS YP_008720787.1 556550826 17429558 789179..789970 1 NC_022648.1 periplasmic protein that interacts with TolA; the tol-pal system is probably involved in maintaining cell envelope integrity; Derived by automated computational analysis using gene prediction method: Protein Homology.; tol-pal system protein YbgF 789970 17429558 P423_03665 Escherichia coli JJ1886 tol-pal system protein YbgF YP_008720787.1 789179 D 1355100 CDS YP_008720788.1 556550827 17429566 791116..792159 1 NC_022648.1 3 different subfamilies; catalyzes the formation of quinolinate from iminoaspartate and dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinolinate synthetase 792159 17429566 P423_03705 Escherichia coli JJ1886 quinolinate synthetase YP_008720788.1 791116 D 1355100 CDS YP_008720789.1 556550828 17429567 792197..792916 1 NC_022648.1 involved in nicotinamide riboside transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinamide riboside transporter PnuC 792916 17429567 P423_03710 Escherichia coli JJ1886 nicotinamide riboside transporter PnuC YP_008720789.1 792197 D 1355100 CDS YP_008720790.1 556550829 17429568 complement(792913..793854) 1 NC_022648.1 involved in zinc efflux across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter ZitB 793854 17429568 P423_03715 Escherichia coli JJ1886 zinc transporter ZitB YP_008720790.1 792913 R 1355100 CDS YP_008720791.1 556550830 17429569 complement(793968..794348) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 794348 17429569 P423_03720 Escherichia coli JJ1886 hypothetical protein YP_008720791.1 793968 R 1355100 CDS YP_008720792.1 556550831 17429570 794664..795716 1 NC_022648.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, phenylalanine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-2-dehydro-3-deoxyheptonate aldolase 795716 17429570 P423_03725 Escherichia coli JJ1886 phospho-2-dehydro-3-deoxyheptonate aldolase YP_008720792.1 794664 D 1355100 CDS YP_008720793.1 556550832 17429571 complement(795883..796635) 1 NC_022648.1 2,3-bisphosphoglycerate-dependent; catalyzes the interconversion of 2-phosphoglycerate to 3-phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglyceromutase 796635 gpmA 17429571 gpmA Escherichia coli JJ1886 phosphoglyceromutase YP_008720793.1 795883 R 1355100 CDS YP_008720794.1 556550833 17429572 complement(796838..797878) 1 NC_022648.1 mutarotase; catalyzes the conversion of beta-galactose to the alpha-anomer; links the metabolism of lactose and galactose; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactose-1-epimerase 797878 galM 17429572 galM Escherichia coli JJ1886 galactose-1-epimerase YP_008720794.1 796838 R 1355100 CDS YP_008720795.1 556550834 17429573 complement(797872..799020) 1 NC_022648.1 catalyzes the formation of alpha-D-galactose 1-phosphate from D-galactose in galactose metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactokinase 799020 17429573 P423_03740 Escherichia coli JJ1886 galactokinase YP_008720795.1 797872 R 1355100 CDS YP_008720796.1 556550835 17429574 complement(799024..800070) 1 NC_022648.1 catalyzes the interconversion of UDP-galactose and galactose-1-P with UDP-galactose and glucose-1-P; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactose-1-phosphate uridylyltransferase 800070 17429574 P423_03745 Escherichia coli JJ1886 galactose-1-phosphate uridylyltransferase YP_008720796.1 799024 R 1355100 CDS YP_008720797.1 556550836 17429575 complement(800080..801096) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-galactose-4-epimerase 801096 17429575 P423_03750 Escherichia coli JJ1886 UDP-galactose-4-epimerase YP_008720797.1 800080 R 1355100 CDS YP_008720798.1 556550837 17429576 complement(801359..802831) 1 NC_022648.1 contains 2 ATP-binding cassettes; involved in the transport of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum ABC transporter ATP-binding protein 802831 17429576 P423_03755 Escherichia coli JJ1886 molybdenum ABC transporter ATP-binding protein YP_008720798.1 801359 R 1355100 CDS YP_008720799.1 556550838 17429577 complement(802899..803687) 1 NC_022648.1 represses the modABCD operon and activates the moaABCD and napFDAGHBC operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 803687 17429577 P423_03760 Escherichia coli JJ1886 transcriptional regulator YP_008720799.1 802899 R 1355100 CDS YP_008720800.1 556550839 17429578 803816..803965 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 803965 17429578 P423_03765 Escherichia coli JJ1886 membrane protein YP_008720800.1 803816 D 1355100 CDS YP_008720801.1 556550840 17429579 804132..804905 1 NC_022648.1 with ModCB is involved in the high-affinity transport of molybdate; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum ABC transporter substrate-binding protein 804905 modA 17429579 modA Escherichia coli JJ1886 molybdenum ABC transporter substrate-binding protein YP_008720801.1 804132 D 1355100 CDS YP_008720802.1 556550841 17429580 804905..805594 1 NC_022648.1 part of ModCBA molybdate transporter; member of ABC superfamily; inner membrane component; regulated by repressor protein ModE; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdate ABC transporter permease 805594 modB 17429580 modB Escherichia coli JJ1886 molybdate ABC transporter permease YP_008720802.1 804905 D 1355100 CDS YP_008720803.1 556550842 17429581 805597..806655 1 NC_022648.1 Part of the ABC transporter complex modABC involved in molybdenum import; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdate ABC transporter ATP-binding protein 806655 modC 17429581 modC Escherichia coli JJ1886 molybdate ABC transporter ATP-binding protein YP_008720803.1 805597 D 1355100 CDS YP_008720804.1 556550843 17429582 complement(806656..807474) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxal phosphate phosphatase 807474 17429582 P423_03785 Escherichia coli JJ1886 pyridoxal phosphate phosphatase YP_008720804.1 806656 R 1355100 CDS YP_008720805.1 556550844 17429583 807629..808624 1 NC_022648.1 catalyzes the hydrolysis of 6-phosphogluconolactone to 6-phosphogluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconolactonase 808624 17429583 P423_03790 Escherichia coli JJ1886 6-phosphogluconolactonase YP_008720805.1 807629 D 1355100 CDS YP_008720806.1 556550845 17429584 complement(808665..809618) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 809618 17429584 P423_03795 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008720806.1 808665 R 1355100 CDS YP_008720807.1 556554347 17429585 809633..809716 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 809716 17429585 P423_03800 Escherichia coli JJ1886 hypothetical protein YP_008720807.1 809633 D 1355100 CDS YP_008720808.1 556550846 17429586 809802..810854 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 810854 17429586 P423_03805 Escherichia coli JJ1886 hypothetical protein YP_008720808.1 809802 D 1355100 CDS YP_008720809.1 556550847 17429587 810930..812363 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 812363 17429587 P423_03810 Escherichia coli JJ1886 membrane protein YP_008720809.1 810930 D 1355100 CDS YP_008720810.1 556550848 17429588 812546..814807 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydratase 814807 17429588 P423_03815 Escherichia coli JJ1886 hydratase YP_008720810.1 812546 D 1355100 CDS YP_008720811.1 556550849 17429589 complement(814948..816231) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA thioesterase 816231 17429589 P423_03820 Escherichia coli JJ1886 acyl-CoA thioesterase YP_008720811.1 814948 R 1355100 CDS YP_008720812.1 556550850 17429590 complement(816383..816859) 1 NC_022648.1 YbhB; similar to rat and human kinase inhibitory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; kinase inhibitor protein 816859 17429590 P423_03825 Escherichia coli JJ1886 kinase inhibitor protein YP_008720812.1 816383 R 1355100 CDS YP_008720813.1 556550851 17429591 complement(816918..818207) 1 NC_022648.1 catalyzes the formation of S-adenosyl-4-methylthionine-2-oxobutanoate and 7,8-diaminononanoate from S-adenosyl-L-methionine and 8-amino-7-oxononanoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosylmethionine--8-amino-7-oxononanoate aminotransferase 818207 17429591 P423_03830 Escherichia coli JJ1886 adenosylmethionine--8-amino-7-oxononanoate aminotransferase YP_008720813.1 816918 R 1355100 CDS YP_008720814.1 556550852 17429592 818294..819334 1 NC_022648.1 catalyzes the formation of biotin from dethiobiotin; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin synthase 819334 17429592 P423_03835 Escherichia coli JJ1886 biotin synthase YP_008720814.1 818294 D 1355100 CDS YP_008720815.1 556550853 17429593 819331..820485 1 NC_022648.1 catalyzes the formation of 8-amino-7-oxononanoate from 6-carboxyhexanoyl-CoA and L-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 8-amino-7-oxononanoate synthase 820485 17429593 P423_03840 Escherichia coli JJ1886 8-amino-7-oxononanoate synthase YP_008720815.1 819331 D 1355100 CDS YP_008720816.1 556550854 17429594 820472..821227 1 NC_022648.1 methyltransferase; acyl carrier protein involved in an unidentified step in the synthesis of pimeloyl-CoA, a biotin precursor; member of the bio operon (bioABFCD); in Escherichia coli, bioC-null mutants require biotin for growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin biosynthesis protein BioC 821227 17429594 P423_03845 Escherichia coli JJ1886 biotin biosynthesis protein BioC YP_008720816.1 820472 D 1355100 CDS YP_008720817.1 556550855 17429595 821220..821897 1 NC_022648.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; Derived by automated computational analysis using gene prediction method: Protein Homology.; dithiobiotin synthetase 821897 bioD 17429595 bioD Escherichia coli JJ1886 dithiobiotin synthetase YP_008720817.1 821220 D 1355100 CDS YP_008720818.1 556550856 17429596 822476..824497 1 NC_022648.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. The beta-hairpin of the Uvr-B subunit is inserted between the strands, where it probes for the presence of a lesion; Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit B 824497 17429596 P423_03855 Escherichia coli JJ1886 excinuclease ABC subunit B YP_008720818.1 822476 D 1355100 CDS YP_008720819.1 556550857 17429597 complement(824535..825443) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 825443 17429597 P423_03860 Escherichia coli JJ1886 hypothetical protein YP_008720819.1 824535 R 1355100 CDS YP_008720820.1 556550858 17429598 825840..826829 1 NC_022648.1 together with moaC, is involved in the conversion of a guanosine derivative (GXP) into molybdopterin precursor Z; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum cofactor biosynthesis protein A 826829 moaA 17429598 moaA Escherichia coli JJ1886 molybdenum cofactor biosynthesis protein A YP_008720820.1 825840 D 1355100 CDS YP_008720821.1 556550859 17429599 826851..827363 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin biosynthesis protein B 827363 17429599 P423_03870 Escherichia coli JJ1886 molybdopterin biosynthesis protein B YP_008720821.1 826851 D 1355100 CDS YP_008720822.1 556550860 17429600 827366..827851 1 NC_022648.1 MoaC; along with MoaA is involved in conversion of a guanosine derivative into molybdopterin precursor Z; involved in molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum cofactor biosynthesis protein MoaC 827851 moaC 17429600 moaC Escherichia coli JJ1886 molybdenum cofactor biosynthesis protein MoaC YP_008720822.1 827366 D 1355100 CDS YP_008720823.1 556550861 17429601 827844..828089 1 NC_022648.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin synthase small subunit 828089 moaD 17429601 moaD Escherichia coli JJ1886 molybdopterin synthase small subunit YP_008720823.1 827844 D 1355100 CDS YP_008720824.1 556550862 17429602 828091..828543 1 NC_022648.1 catalyzes the conversion of molybdopterin precursor Z into molybdopterin; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin guanine dinucleotide biosynthesis protein MoaE 828543 moaE 17429602 moaE Escherichia coli JJ1886 molybdopterin guanine dinucleotide biosynthesis protein MoaE YP_008720824.1 828091 D 1355100 CDS YP_008720825.1 556550863 17429603 828680..829384 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 829384 17429603 P423_03890 Escherichia coli JJ1886 membrane protein YP_008720825.1 828680 D 1355100 CDS YP_008720826.1 556554348 17429604 829471..829563 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 829563 17429604 P423_03895 Escherichia coli JJ1886 hypothetical protein YP_008720826.1 829471 D 1355100 CDS YP_008720827.1 556550864 17429605 829563..830303 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 830303 17429605 P423_03900 Escherichia coli JJ1886 hypothetical protein YP_008720827.1 829563 D 1355100 CDS YP_008720828.1 556550865 17429606 complement(830339..831295) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 831295 17429606 P423_03905 Escherichia coli JJ1886 membrane protein YP_008720828.1 830339 R 1355100 CDS YP_008720829.1 556550866 17429607 complement(831295..832536) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cardiolipin synthase 2 832536 17429607 P423_03910 Escherichia coli JJ1886 cardiolipin synthase 2 YP_008720829.1 831295 R 1355100 CDS YP_008720830.1 556550867 17429608 complement(832533..833294) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 833294 17429608 P423_03915 Escherichia coli JJ1886 hypothetical protein YP_008720830.1 832533 R 1355100 CDS YP_008720831.1 556550868 17429609 833427..833837 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 833837 17429609 P423_03920 Escherichia coli JJ1886 membrane protein YP_008720831.1 833427 D 1355100 CDS YP_008720832.1 556550869 17429610 complement(833799..834905) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 834905 17429610 P423_03925 Escherichia coli JJ1886 membrane protein YP_008720832.1 833799 R 1355100 CDS YP_008720833.1 556550870 17429611 complement(834916..836049) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 836049 17429611 P423_03930 Escherichia coli JJ1886 membrane protein YP_008720833.1 834916 R 1355100 CDS YP_008720834.1 556550871 17429612 complement(836042..837778) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 837778 17429612 P423_03935 Escherichia coli JJ1886 multidrug ABC transporter ATP-binding protein YP_008720834.1 836042 R 1355100 CDS YP_008720835.1 556550872 17429613 complement(837771..838769) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 838769 17429613 P423_03940 Escherichia coli JJ1886 transporter YP_008720835.1 837771 R 1355100 CDS YP_008720836.1 556550873 17429614 complement(838769..839452) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 839452 17429614 P423_03945 Escherichia coli JJ1886 transcriptional regulator YP_008720836.1 838769 R 1355100 CDS YP_008720837.1 556550874 17429615 839669..841030 1 NC_022648.1 this helicase is not essential cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 841030 17429615 P423_03950 Escherichia coli JJ1886 RNA helicase YP_008720837.1 839669 D 1355100 CDS YP_008720838.1 556550875 17429616 841065..841301 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 841301 17429616 P423_03955 Escherichia coli JJ1886 hypothetical protein YP_008720838.1 841065 D 1355100 CDS YP_008720839.1 556550876 17429617 complement(841263..841568) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Swarming motility protein ybiA 841568 17429617 P423_03960 Escherichia coli JJ1886 Swarming motility protein ybiA YP_008720839.1 841263 R 1355100 CDS YP_008720840.1 556550877 17429618 841567..843717 1 NC_022648.1 helicase involved in DNA repair and perhaps also replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase DinG 843717 dinG 17429618 dinG Escherichia coli JJ1886 ATP-dependent DNA helicase DinG YP_008720840.1 841567 D 1355100 CDS YP_008720841.1 556550878 17429619 843745..844707 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 844707 17429619 P423_03970 Escherichia coli JJ1886 glycosyl transferase YP_008720841.1 843745 D 1355100 CDS YP_008720842.1 556550879 17429620 844847..845932 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydrogenase 845932 17429620 P423_03975 Escherichia coli JJ1886 dehydrogenase YP_008720842.1 844847 D 1355100 CDS YP_008720843.1 556550880 17429621 complement(846070..846330) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 846330 17429621 P423_03980 Escherichia coli JJ1886 hypothetical protein YP_008720843.1 846070 R 1355100 CDS YP_008720844.1 556550881 17429622 complement(846595..846861) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 846861 17429622 P423_03985 Escherichia coli JJ1886 hypothetical protein YP_008720844.1 846595 R 1355100 CDS YP_008720845.1 556550882 17429623 complement(846935..847612) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fe(II)-dependent oxygenase 847612 17429623 P423_03990 Escherichia coli JJ1886 Fe(II)-dependent oxygenase YP_008720845.1 846935 R 1355100 CDS YP_008720846.1 556550883 17429624 complement(847654..849936) 1 NC_022648.1 Fiu; YbiL; porin involved in the uptake of iron complexed with catecholate siderophores (e.g. dihydroxybenzoylserine, dihydroxybenzoate) and beta lactam agents; Fiu interacts with TonB which provides the energy required for transport across the outer membrane; acts as a receptor for iron-siderophores and microcins E492, M, and H47; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; catecholate siderophore receptor Fiu 849936 17429624 P423_03995 Escherichia coli JJ1886 catecholate siderophore receptor Fiu YP_008720846.1 847654 R 1355100 CDS YP_008720847.1 556550884 17429625 complement(850201..850461) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 850461 17429625 P423_04000 Escherichia coli JJ1886 hypothetical protein YP_008720847.1 850201 R 1355100 CDS YP_008720848.1 556550885 17429626 850737..851663 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 851663 17429626 P423_04005 Escherichia coli JJ1886 23S rRNA methyltransferase YP_008720848.1 850737 D 1355100 CDS YP_008720849.1 556550886 17429627 complement(851660..853885) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mechanosensitive channel protein 853885 17429627 P423_04010 Escherichia coli JJ1886 mechanosensitive channel protein YP_008720849.1 851660 R 1355100 CDS YP_008720850.1 556550887 17429628 complement(854002..854724) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine ABC transporter ATP-binding protein 854724 17429628 P423_04015 Escherichia coli JJ1886 histidine ABC transporter ATP-binding protein YP_008720850.1 854002 R 1355100 CDS YP_008720851.1 556550888 17429629 complement(854721..855380) 1 NC_022648.1 similar to permease component of ABC transporters; mutations impair ability of Escherichia coli to transport and utilize glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter permease 855380 glnP 17429629 glnP Escherichia coli JJ1886 glutamine ABC transporter permease YP_008720851.1 854721 R 1355100 CDS YP_008720852.1 556550889 17429630 complement(855519..856265) 1 NC_022648.1 similar to periplasmic-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 856265 glnH 17429630 glnH Escherichia coli JJ1886 amino acid ABC transporter substrate-binding protein YP_008720852.1 855519 R 1355100 CDS YP_008720853.1 556550890 17429631 complement(856669..857172) 1 NC_022648.1 binds DNA in a non-sequence-specific manner and is abundant during stationary phase; forms a DNA-protein crystal that protects DNA from damage; required for normal starvation response and long-term stationary viability; forms a homododecameric complex and sequesters iron which provides protection against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA starvation/stationary phase protection protein Dps 857172 17429631 P423_04030 Escherichia coli JJ1886 DNA starvation/stationary phase protection protein Dps YP_008720853.1 856669 R 1355100 CDS YP_008720854.1 556550891 17429632 complement(857472..858359) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine transporter RhtB 858359 17429632 P423_04035 Escherichia coli JJ1886 threonine transporter RhtB YP_008720854.1 857472 R 1355100 CDS YP_008720855.1 556550892 17429633 858712..859227 1 NC_022648.1 OmpX; involved in cell adhesion; forms an eight-stranded antiparallel beta-barrel that protrudes from the cell surface; mutations in the gene increase cell-surface contact in fimbriated strains but decrease contact in nonfimbriated strains; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane protein X 859227 ompX 17429633 ompX Escherichia coli JJ1886 outer membrane protein X YP_008720855.1 858712 D 1355100 CDS YP_008720856.1 556550893 17429634 complement(859276..860859) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoethanolamine transferase 860859 17429634 P423_04045 Escherichia coli JJ1886 phosphoethanolamine transferase YP_008720856.1 859276 R 1355100 CDS YP_008720857.1 556554349 17429635 complement(861131..861238) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 861238 17429635 P423_04050 Escherichia coli JJ1886 hypothetical protein YP_008720857.1 861131 R 1355100 CDS YP_008720858.1 556550894 17429636 861445..861912 1 NC_022648.1 Transcriptional regulator that represses the manganese transporter MntH when manganese is present; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 861912 17429636 P423_04055 Escherichia coli JJ1886 transcriptional regulator YP_008720858.1 861445 D 1355100 CDS YP_008720859.1 556550895 17429637 861909..863027 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 863027 17429637 P423_04060 Escherichia coli JJ1886 membrane protein YP_008720859.1 861909 D 1355100 CDS YP_008720860.1 556550896 17429638 complement(863085..864005) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L,D-transpeptidase 864005 17429638 P423_04065 Escherichia coli JJ1886 L,D-transpeptidase YP_008720860.1 863085 R 1355100 CDS YP_008720861.1 556550897 17429639 864224..865816 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATP-binding protein 865816 17429639 P423_04070 Escherichia coli JJ1886 heme ABC transporter ATP-binding protein YP_008720861.1 864224 D 1355100 CDS YP_008720862.1 556550898 17429640 865860..866012 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 866012 17429640 P423_04075 Escherichia coli JJ1886 hypothetical protein YP_008720862.1 865860 D 1355100 CDS YP_008720863.1 556550899 17429641 complement(866016..866831) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar phosphatase 866831 17429641 P423_04080 Escherichia coli JJ1886 sugar phosphatase YP_008720863.1 866016 R 1355100 CDS YP_008720864.1 556550900 17429642 complement(866977..869409) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate acetyltransferase 869409 17429642 P423_04085 Escherichia coli JJ1886 formate acetyltransferase YP_008720864.1 866977 R 1355100 CDS YP_008720865.1 556550901 17429643 complement(869415..870314) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate formate-lyase 3-activating protein 870314 17429643 P423_04090 Escherichia coli JJ1886 pyruvate formate-lyase 3-activating protein YP_008720865.1 869415 R 1355100 CDS YP_008720866.1 556550902 17429644 870445..871107 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 871107 17429644 P423_04095 Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008720866.1 870445 D 1355100 CDS YP_008720867.1 556550903 17429645 complement(871183..871932) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin-synthase adenylyltransferase 871932 17429645 P423_04100 Escherichia coli JJ1886 molybdopterin-synthase adenylyltransferase YP_008720867.1 871183 R 1355100 CDS YP_008720868.1 556550904 17429646 complement(871932..873167) 1 NC_022648.1 is involved in the formation of active molybdenum cofactor and the chelation of molybdenum; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin biosynthesis protein MoeA 873167 17429646 P423_04105 Escherichia coli JJ1886 molybdopterin biosynthesis protein MoeA YP_008720868.1 871932 R 1355100 CDS YP_008720869.1 556550905 17429647 873371..874336 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isoaspartyl peptidase 874336 17429647 P423_04110 Escherichia coli JJ1886 isoaspartyl peptidase YP_008720869.1 873371 D 1355100 CDS YP_008720870.1 556550906 17429648 874323..876194 1 NC_022648.1 with GsiBCD is involved in glutathione import; GsiA contains 2 ATP-binding domains; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 876194 17429648 P423_04115 Escherichia coli JJ1886 glutathione ABC transporter ATP-binding protein YP_008720870.1 874323 D 1355100 CDS YP_008720871.1 556550907 17429649 876214..877752 1 NC_022648.1 with GsiACD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter substrate-binding protein GsiB 877752 17429649 P423_04120 Escherichia coli JJ1886 glutathione ABC transporter substrate-binding protein GsiB YP_008720871.1 876214 D 1355100 CDS YP_008720872.1 556550908 17429650 877770..878690 1 NC_022648.1 with GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter permease 878690 17429650 P423_04125 Escherichia coli JJ1886 glutathione ABC transporter permease YP_008720872.1 877770 D 1355100 CDS YP_008720873.1 556550909 17429651 878693..879604 1 NC_022648.1 with GsiABD is involved in the transport of glutathione into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter permease GsiD 879604 17429651 P423_04130 Escherichia coli JJ1886 glutathione ABC transporter permease GsiD YP_008720873.1 878693 D 1355100 CDS YP_008720874.1 556550910 17429652 879781..882129 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 882129 17429652 P423_04135 Escherichia coli JJ1886 cyclic di-GMP phosphodiesterase YP_008720874.1 879781 D 1355100 CDS YP_008720875.1 556550911 17429653 882137..883465 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 883465 17429653 P423_04140 Escherichia coli JJ1886 hypothetical protein YP_008720875.1 882137 D 1355100 CDS YP_008720876.1 556550912 17429654 complement(883512..884837) 1 NC_022648.1 catalyzes the methylthiolation of an aspartic acid residue of the S12 protein of the 30S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal protein S12 methylthiotransferase 884837 rimO 17429654 rimO Escherichia coli JJ1886 ribosomal protein S12 methylthiotransferase YP_008720876.1 883512 R 1355100 CDS YP_008720877.1 556550913 17429655 885050..885433 1 NC_022648.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm formation regulatory protein BssR 885433 bssR 17429655 bssR Escherichia coli JJ1886 biofilm formation regulatory protein BssR YP_008720877.1 885050 D 1355100 CDS YP_008720878.1 556550914 17429656 885544..886659 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldose dehydrogenase 886659 17429656 P423_04155 Escherichia coli JJ1886 aldose dehydrogenase YP_008720878.1 885544 D 1355100 CDS YP_008720879.1 556550915 17429657 complement(886656..887282) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione S-transferase 887282 17429657 P423_04160 Escherichia coli JJ1886 glutathione S-transferase YP_008720879.1 886656 R 1355100 CDS YP_008720880.1 556550916 17429658 887520..888731 1 NC_022648.1 penicillin-binding protein 5; removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 888731 17429658 P423_04165 Escherichia coli JJ1886 D-alanyl-D-alanine carboxypeptidase YP_008720880.1 887520 D 1355100 CDS YP_008720881.1 556550917 17429659 complement(888778..889536) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 889536 17429659 P423_04170 Escherichia coli JJ1886 transcriptional regulator YP_008720881.1 888778 R 1355100 CDS YP_008720882.1 556550918 17429660 complement(889594..890190) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP pyrophosphate phosphatase 890190 17429660 P423_04175 Escherichia coli JJ1886 UDP pyrophosphate phosphatase YP_008720882.1 889594 R 1355100 CDS YP_008720883.1 556550919 17429661 890475..891707 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 891707 17429661 P423_04180 Escherichia coli JJ1886 multidrug transporter YP_008720883.1 890475 D 1355100 CDS YP_008720884.1 556550920 17429662 complement(891748..892032) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 892032 17429662 P423_04185 Escherichia coli JJ1886 hypothetical protein YP_008720884.1 891748 R 1355100 CDS YP_008720885.1 556550921 17429663 complement(892118..892933) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar phosphatase SupH 892933 17429663 P423_04190 Escherichia coli JJ1886 sugar phosphatase SupH YP_008720885.1 892118 R 1355100 CDS YP_008720886.1 556550922 17429664 complement(892933..894141) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 894141 17429664 P423_04195 Escherichia coli JJ1886 membrane protein YP_008720886.1 892933 R 1355100 CDS YP_008720887.1 556550923 17429665 894225..894761 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 894761 17429665 P423_04200 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008720887.1 894225 D 1355100 CDS YP_008720888.1 556550924 17429666 complement(894937..896622) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 896622 17429666 P423_04205 Escherichia coli JJ1886 transporter YP_008720888.1 894937 R 1355100 CDS YP_008720889.1 556550925 17429667 896891..897268 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 897268 17429667 P423_04210 Escherichia coli JJ1886 membrane protein YP_008720889.1 896891 D 1355100 CDS YP_008720890.1 556550926 17429668 complement(897298..897555) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 897555 17429668 P423_04215 Escherichia coli JJ1886 glutaredoxin YP_008720890.1 897298 R 1355100 CDS YP_008720891.1 556550927 17429669 897715..898002 1 NC_022648.1 YbjC; located in the same operon as the nfsA gene; member of the soxRS regulon which mediates in part the increased levels of superoxide in response to oxidative stress; induced by paraquat; regulated by SoxS; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 898002 17429669 P423_04220 Escherichia coli JJ1886 hypothetical protein YP_008720891.1 897715 D 1355100 CDS YP_008720892.1 556550928 17429670 897986..898708 1 NC_022648.1 NADPH-dependent; oxygen-insensitive; catalyzes the reduction of nitroaromatic compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitroreductase A 898708 17429670 P423_04225 Escherichia coli JJ1886 nitroreductase A YP_008720892.1 897986 D 1355100 CDS YP_008720893.1 556550929 17429671 898769..899671 1 NC_022648.1 responsible for the addition of glutamate residues to the C-terminus of ribosomal protein S6; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal protein S6 modification protein 899671 17429671 P423_04230 Escherichia coli JJ1886 ribosomal protein S6 modification protein YP_008720893.1 898769 D 1355100 CDS YP_008720894.1 556550930 17429672 899759..900235 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 900235 17429672 P423_04235 Escherichia coli JJ1886 hypothetical protein YP_008720894.1 899759 D 1355100 CDS YP_008720895.1 556550931 17429673 900585..901697 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter substrate-binding protein 901697 17429673 P423_04240 Escherichia coli JJ1886 putrescine/spermidine ABC transporter substrate-binding protein YP_008720895.1 900585 D 1355100 CDS YP_008720896.1 556550932 17429674 901792..902925 1 NC_022648.1 with ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter ATP-binding protein 902925 17429674 P423_04245 Escherichia coli JJ1886 glycine/betaine ABC transporter ATP-binding protein YP_008720896.1 901792 D 1355100 CDS YP_008720897.1 556550933 17429675 902935..903879 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 903879 17429675 P423_04250 Escherichia coli JJ1886 putrescine/spermidine ABC transporter permease YP_008720897.1 902935 D 1355100 CDS YP_008720898.1 556550934 17429676 903876..904721 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 904721 17429676 P423_04255 Escherichia coli JJ1886 putrescine/spermidine ABC transporter permease YP_008720898.1 903876 D 1355100 CDS YP_008720899.1 556550935 17429677 904781..905269 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 905269 17429677 P423_04260 Escherichia coli JJ1886 membrane protein YP_008720899.1 904781 D 1355100 CDS YP_008720900.1 556550936 17429678 905310..906437 1 NC_022648.1 RNA uridine methyltransferase B; catalyzes the formation of 5-methyl-uridine at position 747 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 906437 rumB 17429678 rumB Escherichia coli JJ1886 23S rRNA methyltransferase YP_008720900.1 905310 D 1355100 CDS YP_008720901.1 556550937 17429679 complement(906466..907197) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine ABC transporter substrate-binding protein 907197 17429679 P423_04270 Escherichia coli JJ1886 arginine ABC transporter substrate-binding protein YP_008720901.1 906466 R 1355100 CDS YP_008720902.1 556550938 17429680 complement(907423..908091) 1 NC_022648.1 with ArtPQJI acts to transport arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine transporter permease subunit ArtM 908091 artM 17429680 artM Escherichia coli JJ1886 arginine transporter permease subunit ArtM YP_008720902.1 907423 R 1355100 CDS YP_008720903.1 556550939 17429681 complement(908091..908807) 1 NC_022648.1 with ArtPMJI transports arginine across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine transporter permease subunit ArtQ 908807 17429681 P423_04280 Escherichia coli JJ1886 arginine transporter permease subunit ArtQ YP_008720903.1 908091 R 1355100 CDS YP_008720904.1 556550940 17429682 complement(908814..909545) 1 NC_022648.1 with ArtPMQI is involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine ABC transporter substrate-binding protein 909545 17429682 P423_04285 Escherichia coli JJ1886 arginine ABC transporter substrate-binding protein YP_008720904.1 908814 R 1355100 CDS YP_008720905.1 556550941 17429683 complement(909563..910291) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter ATP-binding protein 910291 17429683 P423_04290 Escherichia coli JJ1886 amino acid ABC transporter ATP-binding protein YP_008720905.1 909563 R 1355100 CDS YP_008720906.1 556550942 17429684 complement(910509..911024) 1 NC_022648.1 induced during stationary phase and by acivicin (a glutamine analog); regulated by Lrp and RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 911024 17429684 P423_04295 Escherichia coli JJ1886 lipoprotein YP_008720906.1 910509 R 1355100 CDS YP_008720907.1 556550943 17429685 911150..911473 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 911473 17429685 P423_04300 Escherichia coli JJ1886 hypothetical protein YP_008720907.1 911150 D 1355100 CDS YP_008720908.1 556550944 17429686 911470..912300 1 NC_022648.1 catalyzes the cleavage of the bond between muamic acid and l-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 912300 17429686 P423_04305 Escherichia coli JJ1886 N-acetylmuramoyl-L-alanine amidase YP_008720908.1 911470 D 1355100 CDS YP_008720909.1 556550945 17429687 complement(912297..913346) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 913346 17429687 P423_04310 Escherichia coli JJ1886 hypothetical protein YP_008720909.1 912297 R 1355100 CDS YP_008720910.1 556550946 17429688 complement(913409..914839) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 914839 17429688 P423_04315 Escherichia coli JJ1886 hypothetical protein YP_008720910.1 913409 R 1355100 CDS YP_008720911.1 556550947 17429689 complement(914850..915851) 1 NC_022648.1 low- specificity; catalyzes the formation of acetaldehyde and glycine from L-threonine; acts on L-threonine, L-allo-threonine, L-threo-phenylserine, and L-erythro-phenylserine; Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine aldolase 915851 17429689 P423_04320 Escherichia coli JJ1886 threonine aldolase YP_008720911.1 914850 R 1355100 CDS YP_008720912.1 556550948 17429690 complement(915888..917606) 1 NC_022648.1 catalyzes the formation of acetate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate dehydrogenase 917606 17429690 P423_04325 Escherichia coli JJ1886 pyruvate dehydrogenase YP_008720912.1 915888 R 1355100 CDS YP_008720913.1 556550949 17429691 complement(917739..918707) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 918707 17429691 P423_04330 Escherichia coli JJ1886 oxidoreductase YP_008720913.1 917739 R 1355100 CDS YP_008720914.1 556550950 17429692 complement(918719..920371) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxylamine reductase 920371 17429692 P423_04335 Escherichia coli JJ1886 hydroxylamine reductase YP_008720914.1 918719 R 1355100 CDS YP_008720915.1 556550951 17429693 complement(920515..921414) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 921414 17429693 P423_04340 Escherichia coli JJ1886 membrane protein YP_008720915.1 920515 R 1355100 CDS YP_008720916.1 556554350 17429694 921392..921526 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 921526 17429694 P423_04345 Escherichia coli JJ1886 hypothetical protein YP_008720916.1 921392 D 1355100 CDS YP_008720917.1 556554351 17429695 921743..921832 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 921832 17429695 P423_04350 Escherichia coli JJ1886 hypothetical protein YP_008720917.1 921743 D 1355100 CDS YP_008720918.1 556550952 17429696 complement(921829..922524) 1 NC_022648.1 porin involved in osmoregulation allowing water to move into and out of the cell in response to osmotic pressure; Derived by automated computational analysis using gene prediction method: Protein Homology.; aquaporin Z 922524 17429696 P423_04355 Escherichia coli JJ1886 aquaporin Z YP_008720918.1 921829 R 1355100 CDS YP_008720919.1 556550953 17429697 922949..924607 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 924607 17429697 P423_04360 Escherichia coli JJ1886 hypothetical protein YP_008720919.1 922949 D 1355100 CDS YP_008720920.1 556550954 17429698 complement(924604..925596) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 925596 17429698 P423_04365 Escherichia coli JJ1886 hypothetical protein YP_008720920.1 924604 R 1355100 CDS YP_008720921.1 556550955 17429699 925711..926826 1 NC_022648.1 confers macrolide resistance via active drug efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; macrolide transporter subunit MacA 926826 17429699 P423_04370 Escherichia coli JJ1886 macrolide transporter subunit MacA YP_008720921.1 925711 D 1355100 CDS YP_008720922.1 556550956 17429700 926823..928769 1 NC_022648.1 with MacA is involved in the export of macrolide; Derived by automated computational analysis using gene prediction method: Protein Homology.; macrolide ABC transporter ATP-binding protein 928769 17429700 P423_04375 Escherichia coli JJ1886 macrolide ABC transporter ATP-binding protein YP_008720922.1 926823 D 1355100 CDS YP_008720923.1 556550957 17429701 complement(928842..929066) 1 NC_022648.1 inhibits DNA replication at both initiation and elongation steps; stationary phase and starvation inducible; Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 929066 17429701 P423_04380 Escherichia coli JJ1886 cold-shock protein YP_008720923.1 928842 R 1355100 CDS YP_008720924.1 556550958 17429702 929389..929709 1 NC_022648.1 involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation; binds to the N-terminal domain of the chaperone ClpA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent Clp protease adaptor protein ClpS 929709 clpS 17429702 clpS Escherichia coli JJ1886 ATP-dependent Clp protease adaptor protein ClpS YP_008720924.1 929389 D 1355100 CDS YP_008720925.1 556550959 17429703 929740..932016 1 NC_022648.1 ATPase and specificity subunit of the ClpA-ClpP ATP dependent serine protease; directs protease to specific substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent Clp protease ATP-binding protein 932016 clpA 17429703 clpA Escherichia coli JJ1886 ATP-dependent Clp protease ATP-binding protein YP_008720925.1 929740 D 1355100 CDS YP_008720926.1 556550960 17429705 complement(932701..932919) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-1 932919 17429705 P423_04400 Escherichia coli JJ1886 translation initiation factor IF-1 YP_008720926.1 932701 R 1355100 CDS YP_008720927.1 556550961 17429706 complement(933204..933908) 1 NC_022648.1 leucyltransferase; phenylalanyltransferse; functions in the N-end rule pathway; transfers Leu, Phe, Met, from aminoacyl-tRNAs to N-terminal of proteins with Arg or Lys; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucyl/phenylalanyl-tRNA--protein transferase 933908 aat 17429706 aat Escherichia coli JJ1886 leucyl/phenylalanyl-tRNA--protein transferase YP_008720927.1 933204 R 1355100 CDS YP_008720928.1 556550962 17429707 complement(933950..935671) 1 NC_022648.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 935671 17429707 P423_04410 Escherichia coli JJ1886 glutathione ABC transporter ATP-binding protein YP_008720928.1 933950 R 1355100 CDS YP_008720929.1 556550963 17429708 complement(935672..937438) 1 NC_022648.1 in Escherichia coli the CydCD ABC transporter exports cysteine and glutathione into the periplasm in order to maintain redox balance; important for cytochrome bd and c; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 937438 17429708 P423_04415 Escherichia coli JJ1886 glutathione ABC transporter ATP-binding protein YP_008720929.1 935672 R 1355100 CDS YP_008720930.1 556550964 17429709 complement(937561..938631) 1 NC_022648.1 catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin reductase 938631 17429709 P423_04420 Escherichia coli JJ1886 thioredoxin reductase YP_008720930.1 937561 R 1355100 CDS YP_008720931.1 556550965 17429710 939070..939564 1 NC_022648.1 mediates a global response to leucine; acts as a regulator for several genes involved in the high-affinity branched-chain amino acid transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; AsnC family transcriptional regulator 939564 17429710 P423_04425 Escherichia coli JJ1886 AsnC family transcriptional regulator YP_008720931.1 939070 D 1355100 CDS YP_008720932.1 556550966 17429711 939699..943805 1 NC_022648.1 DNA-binding membrane protein required for chromosome resolution and partitioning; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsK 943805 17429711 P423_04430 Escherichia coli JJ1886 cell division protein FtsK YP_008720932.1 939699 D 1355100 CDS YP_008720933.1 556550967 17429712 943964..944575 1 NC_022648.1 participates with LolB in the incorporation of lipoprotein into the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein chaperone 944575 lolA 17429712 lolA Escherichia coli JJ1886 lipoprotein chaperone YP_008720933.1 943964 D 1355100 CDS YP_008720934.1 556550968 17429713 944586..945929 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase RarA 945929 17429713 P423_04440 Escherichia coli JJ1886 recombinase RarA YP_008720934.1 944586 D 1355100 CDS YP_008720935.1 556550969 17429714 946020..947312 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; seryl-tRNA synthetase 947312 17429714 P423_04445 Escherichia coli JJ1886 seryl-tRNA synthetase YP_008720935.1 946020 D 1355100 CDS YP_008720936.1 556554352 17429715 complement(947618..947758) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hok/gef family protein 947758 17429715 P423_04450 Escherichia coli JJ1886 hok/gef family protein YP_008720936.1 947618 R 1355100 CDS YP_008720937.1 556550970 17429716 complement(947950..948210) 1 NC_022648.1 in E. coli K-12 this is in prophage P2 remnant; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 948210 17429716 P423_04455 Escherichia coli JJ1886 transcriptional regulator YP_008720937.1 947950 R 1355100 CDS YP_008720938.1 556550971 17429717 complement(948251..949360) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; late control protein D 949360 17429717 P423_04460 Escherichia coli JJ1886 late control protein D YP_008720938.1 948251 R 1355100 CDS YP_008720939.1 556550972 17429718 949518..950702 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail sheath protein 950702 17429718 P423_04465 Escherichia coli JJ1886 tail sheath protein YP_008720939.1 949518 D 1355100 CDS YP_008720940.1 556550973 17429719 950702..951214 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major tail tube protein 951214 17429719 P423_04470 Escherichia coli JJ1886 major tail tube protein YP_008720940.1 950702 D 1355100 CDS YP_008720941.1 556554353 17429720 951270..951644 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 951644 17429720 P423_04475 Escherichia coli JJ1886 tail protein YP_008720941.1 951270 D 1355100 CDS YP_008720942.1 556550974 17429721 951653..951808 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 951808 17429721 P423_04480 Escherichia coli JJ1886 tail protein YP_008720942.1 951653 D 1355100 CDS YP_008720943.1 556550975 17433814 954615..955103 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 955103 17433814 P423_04485 Escherichia coli JJ1886 tail assembly protein YP_008720943.1 954615 D 1355100 CDS YP_008720944.1 556550976 17429723 complement(955132..955731) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA invertase 955731 17429723 P423_04490 Escherichia coli JJ1886 DNA invertase YP_008720944.1 955132 R 1355100 CDS YP_008720945.1 556554354 17429724 955959..956744 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 956744 17429724 P423_04495 Escherichia coli JJ1886 hypothetical protein YP_008720945.1 955959 D 1355100 CDS YP_008720946.1 556550977 17429725 complement(957312..957845) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber assembly protein 957845 17429725 P423_04500 Escherichia coli JJ1886 tail fiber assembly protein YP_008720946.1 957312 R 1355100 CDS YP_008720947.1 556554355 17429726 complement(957848..959833) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phage tail protein 959833 17429726 P423_04505 Escherichia coli JJ1886 phage tail protein YP_008720947.1 957848 R 1355100 CDS YP_008720948.1 556550978 17429727 complement(959836..960366) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 960366 17429727 P423_04510 Escherichia coli JJ1886 tail protein YP_008720948.1 959836 R 1355100 CDS YP_008720949.1 556550979 17429728 complement(960359..961255) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 961255 17429728 P423_04515 Escherichia coli JJ1886 baseplate assembly protein YP_008720949.1 960359 R 1355100 CDS YP_008720950.1 556550980 17429729 complement(961259..961609) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 961609 17429729 P423_04520 Escherichia coli JJ1886 baseplate assembly protein YP_008720950.1 961259 R 1355100 CDS YP_008720951.1 556550981 17429730 complement(961606..962187) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 962187 17429730 P423_04525 Escherichia coli JJ1886 baseplate assembly protein YP_008720951.1 961606 R 1355100 CDS YP_008720952.1 556554356 17429731 complement(962184..962819) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 962819 17429731 P423_04530 Escherichia coli JJ1886 tail protein YP_008720952.1 962184 R 1355100 CDS YP_008720953.1 556554357 17429732 complement(962812..963279) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 963279 17429732 P423_04535 Escherichia coli JJ1886 tail protein YP_008720953.1 962812 R 1355100 CDS YP_008720954.1 556550982 17429733 complement(963303..965180) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 9-O-acetyl-N-acetylneuraminic acid deacetylase 965180 17429733 P423_04540 Escherichia coli JJ1886 9-O-acetyl-N-acetylneuraminic acid deacetylase YP_008720954.1 963303 R 1355100 CDS YP_008720955.1 556554358 17429734 complement(965319..965714) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 965714 17429734 P423_04545 Escherichia coli JJ1886 hypothetical protein YP_008720955.1 965319 R 1355100 CDS YP_008720956.1 556550983 17429735 complement(965711..966103) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M15 966103 17429735 P423_04550 Escherichia coli JJ1886 peptidase M15 YP_008720956.1 965711 R 1355100 CDS YP_008720957.1 556554359 17429736 complement(966100..966438) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; holin 966438 17429736 P423_04555 Escherichia coli JJ1886 holin YP_008720957.1 966100 R 1355100 CDS YP_008720958.1 556550984 17429737 complement(966426..966626) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein X 966626 17429737 P423_04560 Escherichia coli JJ1886 tail protein X YP_008720958.1 966426 R 1355100 CDS YP_008720959.1 556550985 17429738 complement(966626..967120) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage head protein 967120 17429738 P423_04565 Escherichia coli JJ1886 phage head protein YP_008720959.1 966626 R 1355100 CDS YP_008720960.1 556554360 17429739 complement(967222..968022) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; terminase 968022 17429739 P423_04570 Escherichia coli JJ1886 terminase YP_008720960.1 967222 R 1355100 CDS YP_008720961.1 556550986 17429740 complement(968067..969119) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 969119 17429740 P423_04575 Escherichia coli JJ1886 oxidoreductase YP_008720961.1 968067 R 1355100 CDS YP_008720962.1 556550987 17429741 complement(969143..969979) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; precorrin-8W decarboxylase 969979 17429741 P423_04580 Escherichia coli JJ1886 precorrin-8W decarboxylase YP_008720962.1 969143 R 1355100 CDS YP_008720963.1 556550988 17429742 970134..971885 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 971885 17429742 P423_04585 Escherichia coli JJ1886 terminase YP_008720963.1 970134 D 1355100 CDS YP_008720964.1 556550989 17429743 971885..972931 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Presumed portal vertex protein 972931 17429743 P423_04590 Escherichia coli JJ1886 Presumed portal vertex protein YP_008720964.1 971885 D 1355100 CDS YP_008720965.1 556554361 17429744 complement(972946..973470) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 973470 17429744 P423_04595 Escherichia coli JJ1886 hypothetical protein YP_008720965.1 972946 R 1355100 CDS YP_008720966.1 556554362 17429745 complement(973614..973742) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 973742 17429745 P423_04600 Escherichia coli JJ1886 hypothetical protein YP_008720966.1 973614 R 1355100 CDS YP_008720967.1 556554363 17429746 974194..974691 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 974691 17429746 P423_04605 Escherichia coli JJ1886 membrane protein YP_008720967.1 974194 D 1355100 CDS YP_008720968.1 556554364 17429747 974731..975573 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 975573 17429747 P423_04610 Escherichia coli JJ1886 membrane protein YP_008720968.1 974731 D 1355100 CDS YP_008720969.1 556554365 17429748 complement(975657..975971) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptide transporter 975971 17429748 P423_04615 Escherichia coli JJ1886 peptide transporter YP_008720969.1 975657 R 1355100 CDS YP_008720970.1 556554366 17429749 complement(975976..976935) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; recombinase 976935 17429749 P423_04620 Escherichia coli JJ1886 recombinase YP_008720970.1 975976 R 1355100 CDS YP_008720971.1 556550990 17429750 complement(977012..979834) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; replication protein 979834 17429750 P423_04625 Escherichia coli JJ1886 replication protein YP_008720971.1 977012 R 1355100 CDS YP_008720972.1 556554367 17429751 complement(979841..980206) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 980206 17429751 P423_04630 Escherichia coli JJ1886 hypothetical protein YP_008720972.1 979841 R 1355100 CDS YP_008720973.1 556554368 17429752 complement(980279..980509) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; derepression protein 980509 17429752 P423_04635 Escherichia coli JJ1886 derepression protein YP_008720973.1 980279 R 1355100 CDS YP_008720974.1 556554369 17429753 complement(980832..981131) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 981131 17429753 P423_04640 Escherichia coli JJ1886 hypothetical protein YP_008720974.1 980832 R 1355100 CDS YP_008720975.1 556554370 17429754 complement(981128..981394) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MarR family transcriptional regulator 981394 17429754 P423_04645 Escherichia coli JJ1886 MarR family transcriptional regulator YP_008720975.1 981128 R 1355100 CDS YP_008720976.1 556554371 17429755 complement(981391..981594) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 981594 17429755 P423_04650 Escherichia coli JJ1886 hypothetical protein YP_008720976.1 981391 R 1355100 CDS YP_008720977.1 556554372 17429756 complement(981618..982028) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 982028 17429756 P423_04655 Escherichia coli JJ1886 hypothetical protein YP_008720977.1 981618 R 1355100 CDS YP_008720978.1 556554373 17429757 complement(982122..982235) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 982235 17429757 P423_04660 Escherichia coli JJ1886 membrane protein YP_008720978.1 982122 R 1355100 CDS YP_008720979.1 556554374 17429758 complement(982232..982474) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 982474 17429758 P423_04665 Escherichia coli JJ1886 hypothetical protein YP_008720979.1 982232 R 1355100 CDS YP_008720980.1 556554375 17429759 complement(982486..982764) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 982764 17429759 P423_04670 Escherichia coli JJ1886 hypothetical protein YP_008720980.1 982486 R 1355100 CDS YP_008720981.1 556554376 17429760 complement(982775..983125) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 983125 17429760 P423_04675 Escherichia coli JJ1886 hypothetical protein YP_008720981.1 982775 R 1355100 CDS YP_008720982.1 556554377 17429761 983263..983454 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 983454 17429761 P423_04680 Escherichia coli JJ1886 hypothetical protein YP_008720982.1 983263 D 1355100 CDS YP_008720983.1 556554378 17429762 complement(983461..983883) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 983883 17429762 P423_04685 Escherichia coli JJ1886 hypothetical protein YP_008720983.1 983461 R 1355100 CDS YP_008720984.1 556554379 17429763 complement(983888..984409) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 984409 17429763 P423_04690 Escherichia coli JJ1886 transcriptional regulator YP_008720984.1 983888 R 1355100 CDS YP_008720985.1 556550991 17429764 984493..984855 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; repressor 984855 17429764 P423_04695 Escherichia coli JJ1886 repressor YP_008720985.1 984493 D 1355100 CDS YP_008720986.1 556550992 17429765 984925..985917 1 NC_022648.1 Int; binds dsDNA; cleaves and religates DNA through a covalent phosphotyrosine intermediate; bacteriophage P2 Int mediates the site-specific recombination event leading to integration or excision of the phage genome into or out of the Escherichia coli chromosome; integrative recombination occurs between the phage attachment site attP and the bacterial attachment site attB, integrative recombination also requires E. coli IHF; excision requires IHF and the phage-encoded Cox protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 985917 17429765 P423_04700 Escherichia coli JJ1886 integrase YP_008720986.1 984925 D 1355100 CDS YP_008720987.1 556550993 17429766 986217..988661 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit A 988661 17429766 P423_04705 Escherichia coli JJ1886 dimethyl sulfoxide reductase subunit A YP_008720987.1 986217 D 1355100 CDS YP_008720988.1 556550994 17429767 988672..989289 1 NC_022648.1 oxidoreductase, Fe-S subunit; terminal electron transfer protein for the reduction of DMSO; Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit B 989289 17429767 P423_04710 Escherichia coli JJ1886 dimethyl sulfoxide reductase subunit B YP_008720988.1 988672 D 1355100 CDS YP_008720989.1 556550995 17429768 989291..990154 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit C 990154 17429768 P423_04715 Escherichia coli JJ1886 dimethyl sulfoxide reductase subunit C YP_008720989.1 989291 D 1355100 CDS YP_008720990.1 556550996 17429769 complement(990190..990816) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 990816 17429769 P423_04720 Escherichia coli JJ1886 hypothetical protein YP_008720990.1 990190 R 1355100 CDS YP_008720991.1 556550997 17429770 991130..992278 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 992278 17429770 P423_04725 Escherichia coli JJ1886 MFS transporter YP_008720991.1 991130 D 1355100 CDS YP_008720992.1 556550998 17429771 complement(992375..993115) 1 NC_022648.1 activates pyruvate formate-lyase 1 under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate formate lyase-activating protein 993115 pflA 17429771 pflA Escherichia coli JJ1886 pyruvate formate lyase-activating protein YP_008720992.1 992375 R 1355100 CDS YP_008720993.1 556550999 17429772 complement(993307..995589) 1 NC_022648.1 formate acetyltransferase; catalyzes the formation of formate and acetyl-CoA from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; keto-acid formate acetyltransferase 995589 17429772 P423_04735 Escherichia coli JJ1886 keto-acid formate acetyltransferase YP_008720993.1 993307 R 1355100 CDS YP_008720994.1 556551000 17429773 complement(995644..996501) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate transporter 996501 17429773 P423_04740 Escherichia coli JJ1886 formate transporter YP_008720994.1 995644 R 1355100 CDS YP_008720995.1 556551001 17429774 complement(996907..998667) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 998667 17429774 P423_04745 Escherichia coli JJ1886 hypothetical protein YP_008720995.1 996907 R 1355100 CDS YP_008720996.1 556551002 17429775 998797..999489 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 999489 17429775 P423_04750 Escherichia coli JJ1886 membrane protein YP_008720996.1 998797 D 1355100 CDS YP_008720997.1 556551003 17429776 999688..1000776 1 NC_022648.1 catalyzes the formation of 3-phosphonooxypyruvate and glutamate from O-phospho-L-serine and 2-oxoglutarate; catalyzes 4 phosphohydroxy L-threonine from 2-oxo 3 hydroxy 4- phosphobutanoate; required both in major phosphorylated pathway of serine biosynthesis and in the biosynthesis of pyridoxine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phosphoserine/phosphohydroxythreonine aminotransferase 1000776 17429776 P423_04755 Escherichia coli JJ1886 3-phosphoserine/phosphohydroxythreonine aminotransferase YP_008720997.1 999688 D 1355100 CDS YP_008720998.1 556551004 17429777 1000847..1002130 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phosphoshikimate 1-carboxyvinyltransferase 1002130 17429777 P423_04760 Escherichia coli JJ1886 3-phosphoshikimate 1-carboxyvinyltransferase YP_008720998.1 1000847 D 1355100 CDS YP_008720999.1 556551005 17429778 complement(1002386..1002958) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA invertase 1002958 17429778 P423_04765 Escherichia coli JJ1886 DNA invertase YP_008720999.1 1002386 R 1355100 CDS YP_008721000.1 556554380 17429779 1003282..1003542 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1003542 17429779 P423_04770 Escherichia coli JJ1886 hypothetical protein YP_008721000.1 1003282 D 1355100 CDS YP_008721001.1 556551006 17429780 1003542..1004156 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 1004156 17429780 P423_04775 Escherichia coli JJ1886 tail assembly protein YP_008721001.1 1003542 D 1355100 CDS YP_008721002.1 556554381 17429781 complement(1004163..1004606) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail fiber protein 1004606 17429781 P423_04780 Escherichia coli JJ1886 tail fiber protein YP_008721002.1 1004163 R 1355100 CDS YP_008721003.1 556554382 17429782 complement(1004635..1005882) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 1005882 17429782 P423_04785 Escherichia coli JJ1886 tail protein YP_008721003.1 1004635 R 1355100 CDS YP_008721004.1 556551007 17429783 complement(1005885..1006463) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber protein 1006463 17429783 P423_04790 Escherichia coli JJ1886 tail fiber protein YP_008721004.1 1005885 R 1355100 CDS YP_008721005.1 556551008 17429784 complement(1006456..1007559) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate protein 1007559 17429784 P423_04795 Escherichia coli JJ1886 baseplate protein YP_008721005.1 1006456 R 1355100 CDS YP_008721006.1 556551009 17429785 complement(1007550..1007897) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate protein 1007897 17429785 P423_04800 Escherichia coli JJ1886 baseplate protein YP_008721006.1 1007550 R 1355100 CDS YP_008721007.1 556551010 17429786 complement(1007952..1008548) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate protein 1008548 17429786 P423_04805 Escherichia coli JJ1886 baseplate protein YP_008721007.1 1007952 R 1355100 CDS YP_008721008.1 556551011 17429787 complement(1008545..1009699) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 1009699 17429787 P423_04810 Escherichia coli JJ1886 regulatory protein YP_008721008.1 1008545 R 1355100 CDS YP_008721009.1 556551012 17429788 complement(1009687..1009899) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1009899 17429788 P423_04815 Escherichia coli JJ1886 membrane protein YP_008721009.1 1009687 R 1355100 CDS YP_008721010.1 556551013 17429789 complement(1009899..1010783) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1010783 17429789 P423_04820 Escherichia coli JJ1886 hypothetical protein YP_008721010.1 1009899 R 1355100 CDS YP_008721011.1 556554383 17429790 complement(1010783..1013734) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 1013734 17429790 P423_04825 Escherichia coli JJ1886 tail protein YP_008721011.1 1010783 R 1355100 CDS YP_008721012.1 556554384 17429791 complement(1013892..1014227) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1014227 17429791 P423_04830 Escherichia coli JJ1886 hypothetical protein YP_008721012.1 1013892 R 1355100 CDS YP_008721013.1 556551014 17429792 complement(1014325..1014606) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1014606 17429792 P423_04835 Escherichia coli JJ1886 hypothetical protein YP_008721013.1 1014325 R 1355100 CDS YP_008721014.1 556551015 17429793 complement(1014609..1015130) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1015130 17429793 P423_04840 Escherichia coli JJ1886 tail protein YP_008721014.1 1014609 R 1355100 CDS YP_008721015.1 556551016 17429794 complement(1015130..1016557) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1016557 17429794 P423_04845 Escherichia coli JJ1886 tail protein YP_008721015.1 1015130 R 1355100 CDS YP_008721016.1 556551017 17429795 complement(1016547..1016798) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1016798 17429795 P423_04850 Escherichia coli JJ1886 hypothetical protein YP_008721016.1 1016547 R 1355100 CDS YP_008721017.1 556551018 17429796 complement(1016798..1017262) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1017262 17429796 P423_04855 Escherichia coli JJ1886 hypothetical protein YP_008721017.1 1016798 R 1355100 CDS YP_008721018.1 556551019 17429797 complement(1017262..1017708) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1017708 17429797 P423_04860 Escherichia coli JJ1886 hypothetical protein YP_008721018.1 1017262 R 1355100 CDS YP_008721019.1 556551020 17429798 complement(1017710..1018048) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1018048 17429798 P423_04865 Escherichia coli JJ1886 membrane protein YP_008721019.1 1017710 R 1355100 CDS YP_008721020.1 556551021 17429799 complement(1018058..1019011) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1019011 17429799 P423_04870 Escherichia coli JJ1886 hypothetical protein YP_008721020.1 1018058 R 1355100 CDS YP_008721021.1 556551022 17429800 complement(1019026..1020141) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 1020141 17429800 P423_04875 Escherichia coli JJ1886 peptidase YP_008721021.1 1019026 R 1355100 CDS YP_008721022.1 556551023 17429801 complement(1020356..1020814) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage morphogeneis protein 1020814 17429801 P423_04880 Escherichia coli JJ1886 phage morphogeneis protein YP_008721022.1 1020356 R 1355100 CDS YP_008721023.1 556551024 17429802 complement(1020817..1021638) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage head morphogenesis protein 1021638 17429802 P423_04885 Escherichia coli JJ1886 phage head morphogenesis protein YP_008721023.1 1020817 R 1355100 CDS YP_008721024.1 556551025 17429803 complement(1021619..1023115) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1023115 17429803 P423_04890 Escherichia coli JJ1886 hypothetical protein YP_008721024.1 1021619 R 1355100 CDS YP_008721025.1 556551026 17429804 complement(1023115..1024710) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1024710 17429804 P423_04895 Escherichia coli JJ1886 hypothetical protein YP_008721025.1 1023115 R 1355100 CDS YP_008721026.1 556551027 17429805 complement(1024707..1025252) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1025252 17429805 P423_04900 Escherichia coli JJ1886 hypothetical protein YP_008721026.1 1024707 R 1355100 CDS YP_008721027.1 556551028 17429806 complement(1025252..1025563) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1025563 17429806 P423_04905 Escherichia coli JJ1886 hypothetical protein YP_008721027.1 1025252 R 1355100 CDS YP_008721028.1 556551029 17429807 complement(1025563..1025889) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1025889 17429807 P423_04910 Escherichia coli JJ1886 membrane protein YP_008721028.1 1025563 R 1355100 CDS YP_008721029.1 556554385 17429808 complement(1025886..1026536) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1026536 17429808 P423_04915 Escherichia coli JJ1886 hypothetical protein YP_008721029.1 1025886 R 1355100 CDS YP_008721030.1 556551030 17429809 complement(1026520..1027260) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 1027260 17429809 P423_04920 Escherichia coli JJ1886 lysozyme YP_008721030.1 1026520 R 1355100 CDS YP_008721031.1 556551031 17429810 complement(1027263..1027613) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1027613 17429810 P423_04925 Escherichia coli JJ1886 membrane protein YP_008721031.1 1027263 R 1355100 CDS YP_008721032.1 556554386 17429811 1027744..1027875 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1027875 17429811 P423_04930 Escherichia coli JJ1886 hypothetical protein YP_008721032.1 1027744 D 1355100 CDS YP_008721033.1 556551032 17429812 complement(1027862..1029433) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 1029433 17429812 P423_04935 Escherichia coli JJ1886 transposase IS66 YP_008721033.1 1027862 R 1355100 CDS YP_008721034.1 556551033 17429813 complement(1029506..1029856) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 1029856 17429813 P423_04940 Escherichia coli JJ1886 isocitrate lyase YP_008721034.1 1029506 R 1355100 CDS YP_008721035.1 556554387 17429814 complement(1029853..1030278) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 1030278 17429814 P423_04945 Escherichia coli JJ1886 transposase YP_008721035.1 1029853 R 1355100 CDS YP_008721036.1 556554388 17429815 1030390..1031025 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1031025 17429815 P423_04950 Escherichia coli JJ1886 hypothetical protein YP_008721036.1 1030390 D 1355100 CDS YP_008721037.1 556554389 17429816 complement(1031001..1031405) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1031405 17429816 P423_04955 Escherichia coli JJ1886 hypothetical protein YP_008721037.1 1031001 R 1355100 CDS YP_008721038.1 556554390 17429817 1031404..1031619 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1031619 17429817 P423_04960 Escherichia coli JJ1886 hypothetical protein YP_008721038.1 1031404 D 1355100 CDS YP_008721039.1 556551034 17429818 1031810..1032574 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA methyltransferase 1032574 17429818 P423_04965 Escherichia coli JJ1886 DNA methyltransferase YP_008721039.1 1031810 D 1355100 CDS YP_008721040.1 556554391 17429819 complement(1032691..1033047) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 1033047 17429819 P423_04970 Escherichia coli JJ1886 DNA-binding protein YP_008721040.1 1032691 R 1355100 CDS YP_008721041.1 556551035 17429820 1033141..1033329 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1033329 17429820 P423_04975 Escherichia coli JJ1886 hypothetical protein YP_008721041.1 1033141 D 1355100 CDS YP_008721042.1 556551036 17429821 1033382..1033690 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 1033690 17429821 P423_04980 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008721042.1 1033382 D 1355100 CDS YP_008721043.1 556551037 17429822 1033701..1034621 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1034621 17429822 P423_04985 Escherichia coli JJ1886 hypothetical protein YP_008721043.1 1033701 D 1355100 CDS YP_008721044.1 556554392 17429823 1034621..1034938 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1034938 17429823 P423_04990 Escherichia coli JJ1886 hypothetical protein YP_008721044.1 1034621 D 1355100 CDS YP_008721045.1 556551038 17429824 1034954..1036723 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1036723 17429824 P423_04995 Escherichia coli JJ1886 integrase YP_008721045.1 1034954 D 1355100 CDS YP_008721046.1 556551039 17429825 1036734..1037900 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 1037900 17429825 P423_05000 Escherichia coli JJ1886 transposase YP_008721046.1 1036734 D 1355100 CDS YP_008721047.1 556554393 17429826 1037903..1038172 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1038172 17429826 P423_05005 Escherichia coli JJ1886 hypothetical protein YP_008721047.1 1037903 D 1355100 CDS YP_008721048.1 556551040 17429827 1038200..1038730 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host-nuclease inhibitor protein Gam 1038730 17429827 P423_05010 Escherichia coli JJ1886 host-nuclease inhibitor protein Gam YP_008721048.1 1038200 D 1355100 CDS YP_008721049.1 556554394 17429828 complement(1038741..1038962) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1038962 17429828 P423_05015 Escherichia coli JJ1886 hypothetical protein YP_008721049.1 1038741 R 1355100 CDS YP_008721050.1 556554395 17429829 1039019..1039291 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1039291 17429829 P423_05020 Escherichia coli JJ1886 hypothetical protein YP_008721050.1 1039019 D 1355100 CDS YP_008721051.1 556554396 17429830 1039301..1039597 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1039597 17429830 P423_05025 Escherichia coli JJ1886 hypothetical protein YP_008721051.1 1039301 D 1355100 CDS YP_008721052.1 556554397 17429831 1039612..1039827 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1039827 17429831 P423_05030 Escherichia coli JJ1886 hypothetical protein YP_008721052.1 1039612 D 1355100 CDS YP_008721053.1 556554398 17429832 1039824..1040507 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1040507 17429832 P423_05035 Escherichia coli JJ1886 hypothetical protein YP_008721053.1 1039824 D 1355100 CDS YP_008721054.1 556554399 17429833 1040504..1040734 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1040734 17429833 P423_05040 Escherichia coli JJ1886 hypothetical protein YP_008721054.1 1040504 D 1355100 CDS YP_008721055.1 556551041 17429834 1040932..1041381 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Mu gp16 gemA 1041381 17429834 P423_05045 Escherichia coli JJ1886 Mu gp16 gemA YP_008721055.1 1040932 D 1355100 CDS YP_008721056.1 556551042 17429835 1041353..1041742 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1041742 17429835 P423_05050 Escherichia coli JJ1886 DNA-binding protein YP_008721056.1 1041353 D 1355100 CDS YP_008721057.1 556551043 17429836 1041922..1042668 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metalloprotease 1042668 17429836 P423_05055 Escherichia coli JJ1886 metalloprotease YP_008721057.1 1041922 D 1355100 CDS YP_008721058.1 556551044 17429837 1042841..1043524 1 NC_022648.1 Catalyzes the formation of (d)CDP from ATP and (d)CMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytidylate kinase 1043524 cmk 17429837 cmk Escherichia coli JJ1886 cytidylate kinase YP_008721058.1 1042841 D 1355100 CDS YP_008721059.1 556551045 17429838 1043635..1045308 1 NC_022648.1 in Escherichia coli this protein is involved in binding to the leader sequence of mRNAs and is itself bound to the 30S subunit; autoregulates expression via a C-terminal domain; in most gram negative organisms this protein is composed of 6 repeats of the S1 domain while in gram positive there are 4 repeats; the S1 nucleic acid-binding domain is found associated with other proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S1 1045308 rpsA 17429838 rpsA Escherichia coli JJ1886 30S ribosomal protein S1 YP_008721059.1 1043635 D 1355100 CDS YP_008721060.1 556551046 17429839 1045468..1045752 1 NC_022648.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.; integration host factor subunit beta 1045752 ihfB 17429839 ihfB Escherichia coli JJ1886 integration host factor subunit beta YP_008721060.1 1045468 D 1355100 CDS YP_008721061.1 556551047 17429840 1045958..1048222 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; competence protein ComEC 1048222 17429840 P423_05075 Escherichia coli JJ1886 competence protein ComEC YP_008721061.1 1045958 D 1355100 CDS YP_008721062.1 556551048 17429841 1048259..1050007 1 NC_022648.1 involved in the transport of lipid A across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 1050007 17429841 P423_05080 Escherichia coli JJ1886 ATP-binding protein YP_008721062.1 1048259 D 1355100 CDS YP_008721063.1 556551049 17429842 1050004..1050990 1 NC_022648.1 transfers the gamma-phosphate of ATP to the 4' position of a tetraacyldisaccharide 1-phosphate intermediate to form tetraacyldisaccharide 1,4'-bis-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; tetraacyldisaccharide 4'-kinase 1050990 lpxK 17429842 lpxK Escherichia coli JJ1886 tetraacyldisaccharide 4'-kinase YP_008721063.1 1050004 D 1355100 CDS YP_008721064.1 556551050 17429843 1051027..1052259 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1052259 17429843 P423_05090 Escherichia coli JJ1886 hypothetical protein YP_008721064.1 1051027 D 1355100 CDS YP_008721065.1 556551051 17429844 1052311..1052493 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1052493 17429844 P423_05095 Escherichia coli JJ1886 hypothetical protein YP_008721065.1 1052311 D 1355100 CDS YP_008721066.1 556551052 17429845 1052490..1053236 1 NC_022648.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-manno-octulosonate cytidylyltransferase 1053236 17429845 P423_05100 Escherichia coli JJ1886 3-deoxy-manno-octulosonate cytidylyltransferase YP_008721066.1 1052490 D 1355100 CDS YP_008721067.1 556551053 17429846 1053390..1054283 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1054283 17429846 P423_05105 Escherichia coli JJ1886 hypothetical protein YP_008721067.1 1053390 D 1355100 CDS YP_008721068.1 556551054 17429847 complement(1054260..1055039) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1055039 17429847 P423_05110 Escherichia coli JJ1886 membrane protein YP_008721068.1 1054260 R 1355100 CDS YP_008721069.1 556551055 17429848 1055175..1055960 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosyl-L-methionine-dependent methyltransferase 1055960 17429848 P423_05115 Escherichia coli JJ1886 S-adenosyl-L-methionine-dependent methyltransferase YP_008721069.1 1055175 D 1355100 CDS YP_008721070.1 556551056 17429849 1055957..1057279 1 NC_022648.1 acts with MukB and MukE to condense the chromosome and allow for segregation during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; condesin subunit F 1057279 17429849 P423_05120 Escherichia coli JJ1886 condesin subunit F YP_008721070.1 1055957 D 1355100 CDS YP_008721071.1 556551057 17429850 1057260..1057964 1 NC_022648.1 acts with MukB and MukF to condense the chromosome and allow for segregation during cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; condesin subunit E 1057964 17429850 P423_05125 Escherichia coli JJ1886 condesin subunit E YP_008721071.1 1057260 D 1355100 CDS YP_008721072.1 556551058 17429851 1057964..1062424 1 NC_022648.1 SMC (structural maintenance of chromosomes) family of proteins; involved in chromosome condensatin and partitioning; forms a homodimer and the C-terminal is essential for DNA-binding activity while the purified N-terminal domain binds FtsZ; mutations result in cell division defects; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein MukB 1062424 mukB 17429851 mukB Escherichia coli JJ1886 cell division protein MukB YP_008721072.1 1057964 D 1355100 CDS YP_008721073.1 556551059 17429852 1062685..1064532 1 NC_022648.1 catalyzes the formation of a meso-diaminopimelyl- meso-diaminopimelyl crosslink; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein L,D-transpeptidase 1064532 17429852 P423_05135 Escherichia coli JJ1886 murein L,D-transpeptidase YP_008721073.1 1062685 D 1355100 CDS YP_008721074.1 556551060 17429853 1064704..1065261 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1065261 17429853 P423_05140 Escherichia coli JJ1886 hypothetical protein YP_008721074.1 1064704 D 1355100 CDS YP_008721075.1 556551061 17429854 1065288..1065935 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1065935 17429854 P423_05145 Escherichia coli JJ1886 hypothetical protein YP_008721075.1 1065288 D 1355100 CDS YP_008721076.1 556551062 17429855 complement(1065985..1067175) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid aminotransferase 1067175 17429855 P423_05150 Escherichia coli JJ1886 aromatic amino acid aminotransferase YP_008721076.1 1065985 R 1355100 CDS YP_008721077.1 556554400 17429856 1067174..1067344 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1067344 17429856 P423_05155 Escherichia coli JJ1886 hypothetical protein YP_008721077.1 1067174 D 1355100 CDS YP_008721078.1 556551063 17429857 complement(1067360..1068448) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane phosphoporin protein E 1068448 17429857 P423_05160 Escherichia coli JJ1886 outer membrane phosphoporin protein E YP_008721078.1 1067360 R 1355100 CDS YP_008721079.1 556551064 17429858 complement(1069051..1070451) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; asparaginyl-tRNA synthetase 1070451 17429858 P423_05165 Escherichia coli JJ1886 asparaginyl-tRNA synthetase YP_008721079.1 1069051 R 1355100 CDS YP_008721080.1 556551065 17429859 complement(1070620..1071822) 1 NC_022648.1 catalyzes the formation of nictonate and 5-phospho-alpha-D-ribose 1-diphosphate from nicotinate D-ribonucleotide and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinate phosphoribosyltransferase 1071822 17429859 P423_05170 Escherichia coli JJ1886 nicotinate phosphoribosyltransferase YP_008721080.1 1070620 R 1355100 CDS YP_008721081.1 556551066 17429860 1072088..1074700 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase N 1074700 pepN 17429860 pepN Escherichia coli JJ1886 aminopeptidase N YP_008721081.1 1072088 D 1355100 CDS YP_008721082.1 556551067 17429861 complement(1074743..1075510) 1 NC_022648.1 Part of the ABC transporter complex tauABC involved in taurine import; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter ATP-binding protein 1075510 tauB 17429861 tauB Escherichia coli JJ1886 taurine ABC transporter ATP-binding protein YP_008721082.1 1074743 R 1355100 CDS YP_008721083.1 556551068 17429862 complement(1075507..1076298) 1 NC_022648.1 part of the ABC type transport system for alkanesulfonate SsuABC; SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfonate ABC transporter 1076298 ssuC 17429862 ssuC Escherichia coli JJ1886 sulfonate ABC transporter YP_008721083.1 1075507 R 1355100 CDS YP_008721084.1 556551069 17429863 complement(1076310..1077455) 1 NC_022648.1 catalyzes the release of sulfite from alkanesulfonates; Derived by automated computational analysis using gene prediction method: Protein Homology.; alkanesulfonate monooxygenase 1077455 17429863 P423_05190 Escherichia coli JJ1886 alkanesulfonate monooxygenase YP_008721084.1 1076310 R 1355100 CDS YP_008721085.1 556551070 17429864 complement(1077452..1078411) 1 NC_022648.1 part of the ABC type transport system SsuABC for aliphatic sulfonates; with SsuA being the periplasmic subunit SsuB the ATP-binding subunit and SsuC the permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfonate ABC transporter substrate-binding protein 1078411 17429864 P423_05195 Escherichia coli JJ1886 sulfonate ABC transporter substrate-binding protein YP_008721085.1 1077452 R 1355100 CDS YP_008721086.1 556551071 17429865 complement(1078404..1078979) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H-dependent FMN reductase 1078979 17429865 P423_05200 Escherichia coli JJ1886 NAD(P)H-dependent FMN reductase YP_008721086.1 1078404 R 1355100 CDS YP_008721087.1 556551072 17429866 1079216..1080226 1 NC_022648.1 catalyzes the conversion of dihydroorotate to orotate in the pyrimidine biosynthesis pathway; uses a flavin nucleotide as an essential cofactor; class 2 enzymes are monomeric and compared to the class 1 class 2 possess an extended N terminus, which plays a role in the membrane association of the enzyme and provides the binding site for the respiratory quinones that serve as physiological electron acceptors; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroorotate dehydrogenase 1080226 17429866 P423_05205 Escherichia coli JJ1886 dihydroorotate dehydrogenase YP_008721087.1 1079216 D 1355100 CDS YP_008721088.1 556551073 17429867 1080400..1080942 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein ZapC 1080942 17429867 P423_05210 Escherichia coli JJ1886 cell division protein ZapC YP_008721088.1 1080400 D 1355100 CDS YP_008721089.1 556551074 17429868 complement(1080939..1082048) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1082048 17429868 P423_05215 Escherichia coli JJ1886 hypothetical protein YP_008721089.1 1080939 R 1355100 CDS YP_008721090.1 556551075 17429869 1082146..1084254 1 NC_022648.1 catalyzes the N2-methyl guanosine modification of the G2445 residue of 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 1084254 rlmL 17429869 rlmL Escherichia coli JJ1886 23S rRNA methyltransferase YP_008721090.1 1082146 D 1355100 CDS YP_008721091.1 556551076 17429870 1084266..1086173 1 NC_022648.1 Uup; in Escherichia coli this cytoplasmic protein was shown to contain ATPase activity; mutations in this gene affect RecA-independent excision of transposons and affects Mu bacteriophage growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATPase 1086173 17429870 P423_05225 Escherichia coli JJ1886 heme ABC transporter ATPase YP_008721091.1 1084266 D 1355100 CDS YP_008721092.1 556551077 17429871 1086303..1087556 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; paraquat-inducible protein A 1087556 17429871 P423_05230 Escherichia coli JJ1886 paraquat-inducible protein A YP_008721092.1 1086303 D 1355100 CDS YP_008721093.1 556551078 17429872 1087561..1089201 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; paraquat-inducible protein B 1089201 17429872 P423_05235 Escherichia coli JJ1886 paraquat-inducible protein B YP_008721093.1 1087561 D 1355100 CDS YP_008721094.1 556551079 17429873 1089198..1089761 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1089761 17429873 P423_05240 Escherichia coli JJ1886 hypothetical protein YP_008721094.1 1089198 D 1355100 CDS YP_008721095.1 556551080 17429874 1090017..1090184 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome modulation factor 1090184 17429874 P423_05245 Escherichia coli JJ1886 ribosome modulation factor YP_008721095.1 1090017 D 1355100 CDS YP_008721096.1 556551081 17429875 complement(1090254..1090880) 1 NC_022648.1 catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to 2,3-decenoyl-ACP or 3,4-decenoyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-hydroxydecanoyl-ACP dehydratase 1090880 17429875 P423_05250 Escherichia coli JJ1886 3-hydroxydecanoyl-ACP dehydratase YP_008721096.1 1090254 R 1355100 CDS YP_008721097.1 556551082 17429876 complement(1090841..1092601) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Lon protease 1092601 17429876 P423_05255 Escherichia coli JJ1886 Lon protease YP_008721097.1 1090841 R 1355100 CDS YP_008721098.1 556551083 17429877 1092787..1093239 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Ter macrodomain organizer matS-binding protein 1093239 17429877 P423_05260 Escherichia coli JJ1886 Ter macrodomain organizer matS-binding protein YP_008721098.1 1092787 D 1355100 CDS YP_008721099.1 556551084 17429878 complement(1093315..1094424) 1 NC_022648.1 OmpA is believed to be a porin, involved in diffusion of nonspecific small solutes across the outer membrane. It is the most abundant integral protein of the outer membrane of E. coli, and it is known to play a role as a phage receptor, a mediator of F-factor dependent conjugation, and in maintaining the structural shape of the outer membrane; 3a; II*; G; d; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1094424 17429878 P423_05265 Escherichia coli JJ1886 membrane protein YP_008721099.1 1093315 R 1355100 CDS YP_008721100.1 556551085 17429879 complement(1094723..1095232) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; SOS cell division inhibitor 1095232 17429879 P423_05270 Escherichia coli JJ1886 SOS cell division inhibitor YP_008721100.1 1094723 R 1355100 CDS YP_008721101.1 556551086 17429880 1095451..1096080 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Crp/Fnr family transcriptional regulator 1096080 17429880 P423_05275 Escherichia coli JJ1886 Crp/Fnr family transcriptional regulator YP_008721101.1 1095451 D 1355100 CDS YP_008721102.1 556551087 17429881 complement(1096043..1098205) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1098205 17429881 P423_05280 Escherichia coli JJ1886 membrane protein YP_008721102.1 1096043 R 1355100 CDS YP_008721103.1 556551088 17429882 complement(1098215..1098661) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1098661 17429882 P423_05285 Escherichia coli JJ1886 membrane protein YP_008721103.1 1098215 R 1355100 CDS YP_008721104.1 556551089 17429883 1098784..1100838 1 NC_022648.1 catalyzes the ATP-dependent unwinding of duplex DNA in the 3' to 5' direction with respect to the bound single strand; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA helicase IV 1100838 helD 17429883 helD Escherichia coli JJ1886 DNA helicase IV YP_008721104.1 1098784 D 1355100 CDS YP_008721105.1 556551090 17429884 complement(1100870..1101328) 1 NC_022648.1 catalyzes the formation of methylglyoxal from glycerone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; methylglyoxal synthase 1101328 mgsA 17429884 mgsA Escherichia coli JJ1886 methylglyoxal synthase YP_008721105.1 1100870 R 1355100 CDS YP_008721106.1 556551091 17429885 complement(1101424..1102086) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1102086 17429885 P423_05300 Escherichia coli JJ1886 hypothetical protein YP_008721106.1 1101424 R 1355100 CDS YP_008721107.1 556551092 17429886 1102259..1102672 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1102672 17429886 P423_05305 Escherichia coli JJ1886 hypothetical protein YP_008721107.1 1102259 D 1355100 CDS YP_008721108.1 556551093 17429887 complement(1102717..1103034) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein HspQ 1103034 17429887 P423_05310 Escherichia coli JJ1886 heat shock protein HspQ YP_008721108.1 1102717 R 1355100 CDS YP_008721109.1 556551094 17429888 complement(1103092..1104282) 1 NC_022648.1 SAM-dependent;catalyzes the methylation of cytosine at position 1962 of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 1104282 17429888 P423_05315 Escherichia coli JJ1886 23S rRNA methyltransferase YP_008721109.1 1103092 R 1355100 CDS YP_008721110.1 556551095 17429889 1104377..1104655 1 NC_022648.1 catalyzes the hydrolysis of acylphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; acylphosphatase 1104655 17429889 P423_05320 Escherichia coli JJ1886 acylphosphatase YP_008721110.1 1104377 D 1355100 CDS YP_008721111.1 556551096 17429890 complement(1104652..1104981) 1 NC_022648.1 transfers sulfur from TusBCD complex to MnmA; involved in thiouridation of U34 position of some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur transfer protein TusE 1104981 17429890 P423_05325 Escherichia coli JJ1886 sulfur transfer protein TusE YP_008721111.1 1104652 R 1355100 CDS YP_008721112.1 556551097 17429891 complement(1105073..1105732) 1 NC_022648.1 binds to the HflBKC complex which modulates FtsH activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; HflBKC-binding inner membrane protein 1105732 17429891 P423_05330 Escherichia coli JJ1886 HflBKC-binding inner membrane protein YP_008721112.1 1105073 R 1355100 CDS YP_008721113.1 556551098 17429893 1106456..1107574 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 1107574 17429893 P423_05340 Escherichia coli JJ1886 hydrogenase YP_008721113.1 1106456 D 1355100 CDS YP_008721114.1 556551099 17429894 1107571..1109364 1 NC_022648.1 involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 large subunit 1109364 17429894 P423_05345 Escherichia coli JJ1886 hydrogenase 2 large subunit YP_008721114.1 1107571 D 1355100 CDS YP_008721115.1 556551100 17429895 1109383..1110090 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 1 b-type cytochrome subunit 1110090 17429895 P423_05350 Escherichia coli JJ1886 hydrogenase 1 b-type cytochrome subunit YP_008721115.1 1109383 D 1355100 CDS YP_008721116.1 556551101 17429896 1110087..1110674 1 NC_022648.1 HyaD; endopeptidase involved in the cleavage of the C-terminus end of HyaB (the large subunit of hydrogenase 1); Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 1 maturation protease 1110674 17429896 P423_05355 Escherichia coli JJ1886 hydrogenase 1 maturation protease YP_008721116.1 1110087 D 1355100 CDS YP_008721117.1 556551102 17429897 1110671..1111069 1 NC_022648.1 involved in processing hydrogenase proteins HyaA and HyaB; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase-1 operon protein HyaE 1111069 17429897 P423_05360 Escherichia coli JJ1886 hydrogenase-1 operon protein HyaE YP_008721117.1 1110671 D 1355100 CDS YP_008721118.1 556551103 17429898 1111066..1111923 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase-1 operon protein HyaF 1111923 17429898 P423_05365 Escherichia coli JJ1886 hydrogenase-1 operon protein HyaF YP_008721118.1 1111066 D 1355100 CDS YP_008721119.1 556551104 17429899 1112057..1113601 1 NC_022648.1 part of the aerobic respiratory chain; catalyzes the ubiquinol to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit I 1113601 17429899 P423_05370 Escherichia coli JJ1886 cytochrome BD oxidase subunit I YP_008721119.1 1112057 D 1355100 CDS YP_008721120.1 556551105 17429900 1113613..1114749 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome BD oxidase subunit II 1114749 17429900 P423_05375 Escherichia coli JJ1886 cytochrome BD oxidase subunit II YP_008721120.1 1113613 D 1355100 CDS YP_008721121.1 556551106 17429901 1114904..1116244 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoanhydride phosphorylase 1116244 17429901 P423_05380 Escherichia coli JJ1886 phosphoanhydride phosphorylase YP_008721121.1 1114904 D 1355100 CDS YP_008721122.1 556551107 17429902 complement(1116232..1116444) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1116444 17429902 P423_05385 Escherichia coli JJ1886 cold-shock protein YP_008721122.1 1116232 R 1355100 CDS YP_008721123.1 556551108 17429903 1116730..1116942 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1116942 17429903 P423_05390 Escherichia coli JJ1886 cold-shock protein YP_008721123.1 1116730 D 1355100 CDS YP_008721124.1 556551109 17429904 1117116..1117346 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 1117346 17429904 P423_05395 Escherichia coli JJ1886 cold-shock protein YP_008721124.1 1117116 D 1355100 CDS YP_008721125.1 556551110 17429905 1117336..1117509 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gns 1117509 17429905 P423_05400 Escherichia coli JJ1886 gns YP_008721125.1 1117336 D 1355100 CDS YP_008721126.1 556551111 17429906 complement(1117558..1118631) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter YccM 1118631 17429906 P423_05405 Escherichia coli JJ1886 electron transporter YccM YP_008721126.1 1117558 R 1355100 CDS YP_008721127.1 556551112 17429908 1121529..1122557 1 NC_022648.1 periplasmic sensory protein associated with the TorRS two-component regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.; TMAO reductase 1122557 17429908 P423_05415 Escherichia coli JJ1886 TMAO reductase YP_008721127.1 1121529 D 1355100 CDS YP_008721128.1 556551113 17429909 complement(1122530..1123222) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheY 1123222 17429909 P423_05420 Escherichia coli JJ1886 chemotaxis protein CheY YP_008721128.1 1122530 R 1355100 CDS YP_008721129.1 556551114 17429910 1123352..1124524 1 NC_022648.1 with TorA forms the inducible trimethylamine N-oxide reductase which transfers electrons from menaquinones first to TorC then to TorA; Derived by automated computational analysis using gene prediction method: Protein Homology.; trimethylamine N-oxide reductase cytochrome C subunit 1124524 17429910 P423_05425 Escherichia coli JJ1886 trimethylamine N-oxide reductase cytochrome C subunit YP_008721129.1 1123352 D 1355100 CDS YP_008721130.1 556551115 17429911 1124524..1127070 1 NC_022648.1 catalyzes the reduction of trimethylamine-N-oxide to form trimethylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; trimethylamine N-oxide reductase I catalytic subunit 1127070 17429911 P423_05430 Escherichia coli JJ1886 trimethylamine N-oxide reductase I catalytic subunit YP_008721130.1 1124524 D 1355100 CDS YP_008721131.1 556551116 17429912 1127067..1127666 1 NC_022648.1 TorD; involved in the biogenesis of torA; acts on torA before the insertion of the molybdenum cofactor and, as a result, probably favors a conformation of the apoenzyme that is competent for acquiring the cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone protein TorD 1127666 torD 17429912 torD Escherichia coli JJ1886 chaperone protein TorD YP_008721131.1 1127067 D 1355100 CDS YP_008721132.1 556551117 17429913 complement(1127921..1128226) 1 NC_022648.1 with CpbA modulates the activity of the dnaK chaperone system; interacts with CbpA and inhibits both the DnaJ-like co-chaperone activity and the DNA binding activity of CbpA; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone-modulator protein CbpM 1128226 17429913 P423_05440 Escherichia coli JJ1886 chaperone-modulator protein CbpM YP_008721132.1 1127921 R 1355100 CDS YP_008721133.1 556551118 17429914 complement(1128226..1129146) 1 NC_022648.1 functional analog of DnaJ; co-chaperone with DnaK, molecular chaperone in an adaptive response to environmental stresses other than heat shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1129146 17429914 P423_05445 Escherichia coli JJ1886 DNA-binding protein YP_008721133.1 1128226 R 1355100 CDS YP_008721134.1 556551119 17429915 1129681..1130922 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphatase/inositol phosphatase 1130922 17429915 P423_05450 Escherichia coli JJ1886 glucose-1-phosphatase/inositol phosphatase YP_008721134.1 1129681 D 1355100 CDS YP_008721135.1 556551120 17429916 complement(1130960..1131187) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1131187 17429916 P423_05455 Escherichia coli JJ1886 hypothetical protein YP_008721135.1 1130960 R 1355100 CDS YP_008721136.1 556551121 17429917 complement(1131208..1131804) 1 NC_022648.1 catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H:quinone oxidoreductase 1131804 17429917 P423_05460 Escherichia coli JJ1886 NAD(P)H:quinone oxidoreductase YP_008721136.1 1131208 R 1355100 CDS YP_008721137.1 556551122 17429918 1132177..1132350 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1132350 17429918 P423_05465 Escherichia coli JJ1886 hypothetical protein YP_008721137.1 1132177 D 1355100 CDS YP_008721138.1 556551123 17429919 complement(1132433..1133761) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrimidine permease 1133761 17429919 P423_05470 Escherichia coli JJ1886 pyrimidine permease YP_008721138.1 1132433 R 1355100 CDS YP_008721139.1 556551124 17429920 complement(1133782..1134276) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 1134276 17429920 P423_05475 Escherichia coli JJ1886 FMN reductase YP_008721139.1 1133782 R 1355100 CDS YP_008721140.1 556551125 17429921 complement(1134287..1134877) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; malonic semialdehyde reductase 1134877 17429921 P423_05480 Escherichia coli JJ1886 malonic semialdehyde reductase YP_008721140.1 1134287 R 1355100 CDS YP_008721141.1 556551126 17429922 complement(1134887..1135687) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacrylate hydrolase 1135687 17429922 P423_05485 Escherichia coli JJ1886 aminoacrylate hydrolase YP_008721141.1 1134887 R 1355100 CDS YP_008721142.1 556551127 17429923 complement(1135695..1136081) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoacrylate peracid reductase 1136081 17429923 P423_05490 Escherichia coli JJ1886 aminoacrylate peracid reductase YP_008721142.1 1135695 R 1355100 CDS YP_008721143.1 556551128 17429924 complement(1136093..1136788) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amidohydrolase 1136788 17429924 P423_05495 Escherichia coli JJ1886 amidohydrolase YP_008721143.1 1136093 R 1355100 CDS YP_008721144.1 556551129 17429925 complement(1136785..1137879) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrimidine monooxygenase 1137879 17429925 P423_05500 Escherichia coli JJ1886 pyrimidine monooxygenase YP_008721144.1 1136785 R 1355100 CDS YP_008721145.1 556551130 17429926 1138164..1138802 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1138802 17429926 P423_05505 Escherichia coli JJ1886 transcriptional regulator YP_008721145.1 1138164 D 1355100 CDS YP_008721146.1 556551131 17429927 complement(1138842..1142804) 1 NC_022648.1 proline utilization protein A; multifunctional protein that functions in proline catabolism in the first two enzymatic steps resulting in the conversion of proline to glutamate; in Escherichai coli this protein also self-regulates transcription via a DNA-binding domain at the N-terminus; forms dimers and is a peripherally membrane-associated protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 1142804 putA 17429927 putA Escherichia coli JJ1886 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase YP_008721146.1 1138842 R 1355100 CDS YP_008721147.1 556554401 17429928 1142859..1143068 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1143068 17429928 P423_05515 Escherichia coli JJ1886 hypothetical protein YP_008721147.1 1142859 D 1355100 CDS YP_008721148.1 556551132 17429929 1143227..1144735 1 NC_022648.1 involved in the sodium dependent uptake of proline; Derived by automated computational analysis using gene prediction method: Protein Homology.; proline:sodium symporter 1144735 17429929 P423_05520 Escherichia coli JJ1886 proline:sodium symporter YP_008721148.1 1143227 D 1355100 CDS YP_008721149.1 556551133 17429930 1144955..1145785 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron permease 1145785 17429930 P423_05525 Escherichia coli JJ1886 iron permease YP_008721149.1 1144955 D 1355100 CDS YP_008721150.1 556551134 17429931 1145843..1146970 1 NC_022648.1 with EfeUB forms an iron transport system which is silent in E. coli K-12 due to a mutation in EfeU; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron ABC transporter substrate-binding protein 1146970 17429931 P423_05530 Escherichia coli JJ1886 iron ABC transporter substrate-binding protein YP_008721150.1 1145843 D 1355100 CDS YP_008721151.1 556551135 17429932 1146976..1148247 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peroxidase 1148247 17429932 P423_05535 Escherichia coli JJ1886 peroxidase YP_008721151.1 1146976 D 1355100 CDS YP_008721152.1 556551136 17429933 1148598..1149662 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate hydrolase 1149662 17429933 P423_05540 Escherichia coli JJ1886 nucleoside triphosphate hydrolase YP_008721152.1 1148598 D 1355100 CDS YP_008721153.1 556551137 17429934 complement(1149712..1150125) 1 NC_022648.1 in Yersinia this gene is involved in biofilm formation and hemin adsorption; in Escherichia coli it is involved in PGA biosynthesis and export; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 1150125 pgaD 17429934 pgaD Escherichia coli JJ1886 permease YP_008721153.1 1149712 R 1355100 CDS YP_008721154.1 556551138 17429935 complement(1150127..1151452) 1 NC_022648.1 predicted polysaccharide polymerase involved in biofilm formation; required for the synthesis of the beta-1,6-N-acetylglucosamine polysaccharide; PgaC; in Yersinia the HmsR protein is an inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-glycosyltransferase 1151452 17429935 P423_05550 Escherichia coli JJ1886 N-glycosyltransferase YP_008721154.1 1150127 R 1355100 CDS YP_008721155.1 556551139 17429936 complement(1151445..1153463) 1 NC_022648.1 in Yersinia this protein is involved in biofilm formation and hemin adsorption; related protein PgaB in Escherichia coli is an outer membrane N-deacetylase involved in poly-beta-1,6-N-acetyl-D-glucosamine (PGA) export; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane N-deacetylase 1153463 pgaB 17429936 pgaB Escherichia coli JJ1886 outer membrane N-deacetylase YP_008721155.1 1151445 R 1355100 CDS YP_008721156.1 556551140 17429937 complement(1153472..1155895) 1 NC_022648.1 outer membrane protein essential for the synthesis of poly-beta-1,6-N-acetyl-D-glucosamine (PGA); adhesin required for biofilm formation; PgaA (HmsH) seems to translocate and/or dock PGA to the cell surface; member of the hmsHFRS (ycdSRQP or pgaABCD in Escherichia coli) operon in Yersinia; Derived by automated computational analysis using gene prediction method: Protein Homology.; poly-beta-1,6-N-acetyl-D-glucosamine export protein 1155895 pgaA 17429937 pgaA Escherichia coli JJ1886 poly-beta-1,6-N-acetyl-D-glucosamine export protein YP_008721156.1 1153472 R 1355100 CDS YP_008721157.1 556551141 17429938 1156481..1157848 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1157848 17429938 P423_05565 Escherichia coli JJ1886 membrane protein YP_008721157.1 1156481 D 1355100 CDS YP_008721158.1 556554402 17429939 1157845..1157949 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1157949 17429939 P423_05570 Escherichia coli JJ1886 hypothetical protein YP_008721158.1 1157845 D 1355100 CDS YP_008721159.1 556551142 17429941 1158274..1159212 1 NC_022648.1 catalyzes the formation of glycolate and glycerate from glyoxylate and hydroxypyruvate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glyoxylate/hydroxypyruvate reductase A 1159212 ghrA 17429941 ghrA Escherichia coli JJ1886 bifunctional glyoxylate/hydroxypyruvate reductase A YP_008721159.1 1158274 D 1355100 CDS YP_008721160.1 556551143 17429942 1159267..1160004 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 1160004 17429942 P423_05585 Escherichia coli JJ1886 hydrolase YP_008721160.1 1159267 D 1355100 CDS YP_008721161.1 556551144 17429943 1160028..1160582 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone 1160582 17429943 P423_05590 Escherichia coli JJ1886 molecular chaperone YP_008721161.1 1160028 D 1355100 CDS YP_008721162.1 556551145 17429944 1160654..1161175 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1161175 17429944 P423_05595 Escherichia coli JJ1886 membrane protein YP_008721162.1 1160654 D 1355100 CDS YP_008721163.1 556551146 17429945 complement(1161240..1162073) 1 NC_022648.1 involved in the stability of the curlin proteins during assembly; involved in the secretion of the major curlin subunit CsgA across the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1162073 17429945 P423_05600 Escherichia coli JJ1886 transporter YP_008721163.1 1161240 R 1355100 CDS YP_008721164.1 556551147 17429946 complement(1162100..1162516) 1 NC_022648.1 nucleator protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; curli assembly protein CsgF 1162516 17429946 P423_05605 Escherichia coli JJ1886 curli assembly protein CsgF YP_008721164.1 1162100 R 1355100 CDS YP_008721165.1 556551148 17429947 complement(1162541..1162930) 1 NC_022648.1 chaperone-like protein that participates in the polymerization of curlin (CsgA) subunits into curli (extracellular fibers from Escherichia and Salmonella spp. that are involved in the colonization of inert surfaces and biofilm formation); part of the curli secretion and assembly protein complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; curli assembly protein CsgE 1162930 17429947 P423_05610 Escherichia coli JJ1886 curli assembly protein CsgE YP_008721165.1 1162541 R 1355100 CDS YP_008721166.1 556551149 17429948 complement(1162935..1163585) 1 NC_022648.1 activates the csgBA and csgDEFG operons involved in biofilm formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1163585 17429948 P423_05615 Escherichia coli JJ1886 transcriptional regulator YP_008721166.1 1162935 R 1355100 CDS YP_008721167.1 556551150 17429949 1164338..1164793 1 NC_022648.1 CsgB; functions as a nucleator in the assembly of curli (coiled surface structures) on the cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology.; curlin 1164793 csgB 17429949 csgB Escherichia coli JJ1886 curlin YP_008721167.1 1164338 D 1355100 CDS YP_008721168.1 556551151 17429950 1164834..1165292 1 NC_022648.1 the major structural subunit of curlin which assemble to form curli which can bind to fibronectin; Derived by automated computational analysis using gene prediction method: Protein Homology.; major curlin subunit 1165292 csgA 17429950 csgA Escherichia coli JJ1886 major curlin subunit YP_008721168.1 1164834 D 1355100 CDS YP_008721169.1 556551152 17429951 1165352..1165684 1 NC_022648.1 involved in autoagglutination of curliated cells; not involved in production of curli fibers; Derived by automated computational analysis using gene prediction method: Protein Homology.; curli assembly protein CsgC 1165684 csgC 17429951 csgC Escherichia coli JJ1886 curli assembly protein CsgC YP_008721169.1 1165352 D 1355100 CDS YP_008721170.1 556551153 17429952 1165805..1166116 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1166116 17429952 P423_05635 Escherichia coli JJ1886 hypothetical protein YP_008721170.1 1165805 D 1355100 CDS YP_008721171.1 556551154 17429953 1166211..1166744 1 NC_022648.1 interacts and inactivates RNase III during cold shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNase III inhibitor 1166744 17429953 P423_05640 Escherichia coli JJ1886 RNase III inhibitor YP_008721171.1 1166211 D 1355100 CDS YP_008721172.1 556551155 17429954 1166737..1168167 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1168167 17429954 P423_05645 Escherichia coli JJ1886 hypothetical protein YP_008721172.1 1166737 D 1355100 CDS YP_008721173.1 556551156 17429955 complement(1168175..1169332) 1 NC_022648.1 required for the transfer of succinyl residues to osmoregulated periplasmic glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucan biosynthesis protein 1169332 opgC 17429955 opgC Escherichia coli JJ1886 glucan biosynthesis protein YP_008721173.1 1168175 R 1355100 CDS YP_008721174.1 556551157 17429956 1169708..1171261 1 NC_022648.1 involved in the biosynthesis of osmoregulated periplasmic glucans; required for the assembly of the polyglucose structure of glucan; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucan biosynthesis protein D 1171261 mdoG 17429956 mdoG Escherichia coli JJ1886 glucan biosynthesis protein D YP_008721174.1 1169708 D 1355100 CDS YP_008721175.1 556551158 17429957 1171254..1173797 1 NC_022648.1 necessary for biosynthesis of osmoregulated periplasmic glucans possibly involved in the transfer to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosyltransferase 1173797 17429957 P423_05660 Escherichia coli JJ1886 glucosyltransferase YP_008721175.1 1171254 D 1355100 CDS YP_008721176.1 556551159 17433822 1173969..1174196 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1174196 17433822 P423_05665 Escherichia coli JJ1886 lipoprotein YP_008721176.1 1173969 D 1355100 CDS YP_008721177.1 556551160 17429959 complement(1174197..1174571) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; SecY/SecA suppressor protein 1174571 17429959 P423_05670 Escherichia coli JJ1886 SecY/SecA suppressor protein YP_008721177.1 1174197 R 1355100 CDS YP_008721178.1 556551161 17429960 complement(1174654..1175880) 1 NC_022648.1 Confers resistance to fosfomycin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1175880 17429960 P423_05675 Escherichia coli JJ1886 multidrug transporter YP_008721178.1 1174654 R 1355100 CDS YP_008721179.1 556551162 17429961 complement(1176052..1176972) 1 NC_022648.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid A biosynthesis lauroyl acyltransferase 1176972 17429961 P423_05680 Escherichia coli JJ1886 lipid A biosynthesis lauroyl acyltransferase YP_008721179.1 1176052 R 1355100 CDS YP_008721180.1 556551163 17429962 1177197..1178249 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfurtransferase 1178249 17429962 P423_05685 Escherichia coli JJ1886 sulfurtransferase YP_008721180.1 1177197 D 1355100 CDS YP_008721181.1 556551164 17429963 complement(1178291..1178866) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1178866 17429963 P423_05690 Escherichia coli JJ1886 hypothetical protein YP_008721181.1 1178291 R 1355100 CDS YP_008721182.1 556551165 17429964 complement(1178870..1179436) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome B561 1179436 17429964 P423_05695 Escherichia coli JJ1886 cytochrome B561 YP_008721182.1 1178870 R 1355100 CDS YP_008721183.1 556554403 17429965 1179426..1179572 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1179572 17429965 P423_05700 Escherichia coli JJ1886 hypothetical protein YP_008721183.1 1179426 D 1355100 CDS YP_008721184.1 556551166 17429966 complement(1179697..1179837) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1179837 17429966 P423_05705 Escherichia coli JJ1886 hypothetical protein YP_008721184.1 1179697 R 1355100 CDS YP_008721185.1 556551167 17429967 complement(1179858..1180976) 1 NC_022648.1 catalyzes the demethylation of N-methyl-L-tryptophan forming L-tryptophan and formaldehyde; FAD-binding; can also catalyze the demethylation of other N-methyl amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-methyltryptophan oxidase 1180976 solA 17429967 solA Escherichia coli JJ1886 N-methyltryptophan oxidase YP_008721185.1 1179858 R 1355100 CDS YP_008721186.1 556551168 17429968 complement(1181091..1181345) 1 NC_022648.1 BssS; regulator of biofilm through signal secretion; disruption of this gene in Escherichia coli led to effects on biofilm formation, alteration in expression of a number of genes and mutations in bssS led to defects in indole transport and autoinducer-2 uptake and processing; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm formation regulatory protein BssS 1181345 bssS 17429968 bssS Escherichia coli JJ1886 biofilm formation regulatory protein BssS YP_008721186.1 1181091 R 1355100 CDS YP_008721187.1 556551169 17429969 complement(1181634..1181879) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA damage-inducible protein I 1181879 17429969 P423_05720 Escherichia coli JJ1886 DNA damage-inducible protein I YP_008721187.1 1181634 R 1355100 CDS YP_008721188.1 556551170 17429970 complement(1181956..1182999) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroorotase 1182999 17429970 P423_05725 Escherichia coli JJ1886 dihydroorotase YP_008721188.1 1181956 R 1355100 CDS YP_008721189.1 556551171 17429971 complement(1183105..1183665) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1183665 17429971 P423_05730 Escherichia coli JJ1886 lipoprotein YP_008721189.1 1183105 R 1355100 CDS YP_008721190.1 556551172 17429972 complement(1183798..1184445) 1 NC_022648.1 cofactor involved in the reduction of disulfides; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 1184445 17429972 P423_05735 Escherichia coli JJ1886 glutaredoxin YP_008721190.1 1183798 R 1355100 CDS YP_008721191.1 556551173 17429973 complement(1184509..1185717) 1 NC_022648.1 Confers resistance to norfloxacin and enoxacin; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein MdtH 1185717 17429973 P423_05740 Escherichia coli JJ1886 multidrug resistance protein MdtH YP_008721191.1 1184509 R 1355100 CDS YP_008721192.1 556551174 17429974 1185953..1186537 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine acetyltransferase 1186537 17429974 P423_05745 Escherichia coli JJ1886 alanine acetyltransferase YP_008721192.1 1185953 D 1355100 CDS YP_008721193.1 556551175 17429975 1186548..1187195 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1187195 17429975 P423_05750 Escherichia coli JJ1886 hypothetical protein YP_008721193.1 1186548 D 1355100 CDS YP_008721194.1 556551176 17429976 1187197..1188120 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; virulence factor MviM 1188120 17429976 P423_05755 Escherichia coli JJ1886 virulence factor MviM YP_008721194.1 1187197 D 1355100 CDS YP_008721195.1 556551177 17429977 1188230..1189765 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1189765 17429977 P423_05760 Escherichia coli JJ1886 membrane protein YP_008721195.1 1188230 D 1355100 CDS YP_008721196.1 556551178 17429978 complement(1189805..1190221) 1 NC_022648.1 export chaperone for FlgK and FlgL; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagella synthesis chaperone protein FlgN 1190221 17429978 P423_05765 Escherichia coli JJ1886 flagella synthesis chaperone protein FlgN YP_008721196.1 1189805 R 1355100 CDS YP_008721197.1 556551179 17429979 complement(1190226..1190519) 1 NC_022648.1 regulates the flagellar specific sigma28 transcription factor; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-sigma28 factor FlgM 1190519 17429979 P423_05770 Escherichia coli JJ1886 anti-sigma28 factor FlgM YP_008721197.1 1190226 R 1355100 CDS YP_008721198.1 556551180 17429980 complement(1190595..1191254) 1 NC_022648.1 required for the assembly of the flagellar basal body P-ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body P-ring biosynthesis protein FlgA 1191254 flgA 17429980 flgA Escherichia coli JJ1886 flagellar basal body P-ring biosynthesis protein FlgA YP_008721198.1 1190595 R 1355100 CDS YP_008721199.1 556551181 17429981 1191409..1191825 1 NC_022648.1 with FlgF and C makes up the proximal portion of the flagellar basal body rod; Vibrio parahaemolyticus protein is associated with the polar flagella; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgB 1191825 flgB 17429981 flgB Escherichia coli JJ1886 flagellar basal body rod protein FlgB YP_008721199.1 1191409 D 1355100 CDS YP_008721200.1 556551182 17429982 1191829..1192233 1 NC_022648.1 with FlgF and B makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgC 1192233 flgC 17429982 flgC Escherichia coli JJ1886 flagellar basal body rod protein FlgC YP_008721200.1 1191829 D 1355100 CDS YP_008721201.1 556551183 17429983 1192245..1192940 1 NC_022648.1 acts as a scaffold for the assembly of hook proteins onto the flagellar basal body rod; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of some flagellar genes; in V. parahaemolyticus one set used for lateral flagella production and the other is used for the polar flagella production; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod modification protein 1192940 flgD 17429983 flgD Escherichia coli JJ1886 flagellar basal body rod modification protein YP_008721201.1 1192245 D 1355100 CDS YP_008721202.1 556551184 17429984 1192965..1194170 1 NC_022648.1 the hook connects flagellar basal body to the flagellar filament; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook protein FlgE 1194170 flgE 17429984 flgE Escherichia coli JJ1886 flagellar hook protein FlgE YP_008721202.1 1192965 D 1355100 CDS YP_008721203.1 556551185 17429985 1194190..1194945 1 NC_022648.1 FlgF, with FlgB and C, makes up the proximal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgF 1194945 flgF 17429985 flgF Escherichia coli JJ1886 flagellar basal body rod protein FlgF YP_008721203.1 1194190 D 1355100 CDS YP_008721204.1 556551186 17429986 1195117..1195899 1 NC_022648.1 makes up the distal portion of the flagellar basal body rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body rod protein FlgG 1195899 flgG 17429986 flgG Escherichia coli JJ1886 flagellar basal body rod protein FlgG YP_008721204.1 1195117 D 1355100 CDS YP_008721205.1 556551187 17429987 1195953..1196651 1 NC_022648.1 part of the flagellar basal body which consists of four rings L,P, S and M mounted on a central rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body L-ring protein 1196651 flgH 17429987 flgH Escherichia coli JJ1886 flagellar basal body L-ring protein YP_008721205.1 1195953 D 1355100 CDS YP_008721206.1 556551188 17429988 1196663..1197760 1 NC_022648.1 part of the basal body which consists of four rings L, P, S, and M mounted on a central rod; Vibrio parahaemolyticus, Yersinia, Bradyrhizobium and other bacteria have two copies of this and other flagellar genes; the V. parahaemolyticus protein is associated with the polar flagella and the Bradyrhizobium protein is associated with the thick flagellum; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body P-ring protein 1197760 flgI 17429988 flgI Escherichia coli JJ1886 flagellar basal body P-ring protein YP_008721206.1 1196663 D 1355100 CDS YP_008721207.1 556551189 17429989 1197760..1198701 1 NC_022648.1 Flagellum-specific muramidase which hydrolyzes the peptidoglycan layer to assemble the rod structure in the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar rod assembly protein FlgJ 1198701 flgJ 17429989 flgJ Escherichia coli JJ1886 flagellar rod assembly protein FlgJ YP_008721207.1 1197760 D 1355100 CDS YP_008721208.1 556551190 17429990 1198767..1200410 1 NC_022648.1 with FlgL acts as a hook filament junction protein to join the flagellar filament to the hook; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-associated protein FlgK 1200410 flgK 17429990 flgK Escherichia coli JJ1886 flagellar hook-associated protein FlgK YP_008721208.1 1198767 D 1355100 CDS YP_008721209.1 556551191 17429991 1200422..1201375 1 NC_022648.1 with FlgK acts as a hook filament junction protein to join the flagellar filament to the hook; Yersinia, Vibrio parahaemolyticus, Bradyrhizobium and other organisms have 2 copies of this and other flagellar genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-associated protein FlgL 1201375 flgL 17429991 flgL Escherichia coli JJ1886 flagellar hook-associated protein FlgL YP_008721209.1 1200422 D 1355100 CDS YP_008721210.1 556551192 17429992 complement(1201570..1204755) 1 NC_022648.1 bifunctional ribonuclease E/endoribonuclease/RNA-binding protein/RNA degradosome binding protein; forms part of the membrane-associated degradosome complex along with PNPase, RhlB, and enolase; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease E 1204755 rne 17429992 rne Escherichia coli JJ1886 ribonuclease E YP_008721210.1 1201570 R 1355100 CDS YP_008721211.1 556551193 17429993 1204836..1205210 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1205210 17429993 P423_05840 Escherichia coli JJ1886 hypothetical protein YP_008721211.1 1204836 D 1355100 CDS YP_008721212.1 556551194 17429994 1205328..1206287 1 NC_022648.1 catalyzes the transformation of uracil to pseudouracil at nucleotides U955, U2504, and U2580 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridylate synthase C 1206287 17429994 P423_05845 Escherichia coli JJ1886 23S rRNA pseudouridylate synthase C YP_008721212.1 1205328 D 1355100 CDS YP_008721213.1 556551195 17429995 complement(1206399..1207022) 1 NC_022648.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; Maf 1207022 17429995 P423_05850 Escherichia coli JJ1886 Maf YP_008721213.1 1206399 R 1355100 CDS YP_008721214.1 556551196 17429996 1207182..1207703 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1207703 17429996 P423_05855 Escherichia coli JJ1886 hypothetical protein YP_008721214.1 1207182 D 1355100 CDS YP_008721215.1 556551197 17429997 1207755..1207928 1 NC_022648.1 some L32 proteins have zinc finger motifs consisting of CXXC while others do not; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L32 1207928 rpmF 17429997 rpmF Escherichia coli JJ1886 50S ribosomal protein L32 YP_008721215.1 1207755 D 1355100 CDS YP_008721216.1 556551198 17429998 1208009..1209079 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate acyltransferase 1209079 17429998 P423_05865 Escherichia coli JJ1886 phosphate acyltransferase YP_008721216.1 1208009 D 1355100 CDS YP_008721217.1 556551199 17429999 1209147..1210100 1 NC_022648.1 FabH; beta-ketoacyl-acyl carrier protein synthase III; catalyzes the condensation of acetyl-CoA with malonyl-ACP to initiate cycles of fatty acid elongation; differs from 3-oxoacyl-(acyl carrier protein) synthase I and II in that it utilizes CoA thioesters as primers rather than acyl-ACPs; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-oxoacyl-ACP synthase 1210100 17429999 P423_05870 Escherichia coli JJ1886 3-oxoacyl-ACP synthase YP_008721217.1 1209147 D 1355100 CDS YP_008721218.1 556551200 17430000 1210116..1211045 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; malonyl CoA-ACP transacylase 1211045 17430000 P423_05875 Escherichia coli JJ1886 malonyl CoA-ACP transacylase YP_008721218.1 1210116 D 1355100 CDS YP_008721219.1 556551201 17430001 1211058..1211792 1 NC_022648.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-ACP reductase 1211792 fabG 17430001 fabG Escherichia coli JJ1886 3-ketoacyl-ACP reductase YP_008721219.1 1211058 D 1355100 CDS YP_008721220.1 556551202 17430002 1212003..1212239 1 NC_022648.1 carries the fatty acid chain in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl carrier protein 1212239 acpP 17430002 acpP Escherichia coli JJ1886 acyl carrier protein YP_008721220.1 1212003 D 1355100 CDS YP_008721221.1 556551203 17430003 1212327..1213568 1 NC_022648.1 FabF; beta-ketoacyl-ACP synthase II, KASII; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-oxoacyl-ACP synthase 1213568 17430003 P423_05890 Escherichia coli JJ1886 3-oxoacyl-ACP synthase YP_008721221.1 1212327 D 1355100 CDS YP_008721222.1 556551204 17430004 1213688..1214497 1 NC_022648.1 catalyzes the formation of 4-aminobenzoate and pyruvate from 4-amino-4-deoxychorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxychorismate lyase 1214497 17430004 P423_05895 Escherichia coli JJ1886 4-amino-4-deoxychorismate lyase YP_008721222.1 1213688 D 1355100 CDS YP_008721223.1 556551205 17430005 1214500..1215522 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminodeoxychorismate lyase 1215522 17430005 P423_05900 Escherichia coli JJ1886 aminodeoxychorismate lyase YP_008721223.1 1214500 D 1355100 CDS YP_008721224.1 556551206 17430006 1215512..1216153 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidylate kinase 1216153 17430006 P423_05905 Escherichia coli JJ1886 thymidylate kinase YP_008721224.1 1215512 D 1355100 CDS YP_008721225.1 556551207 17430007 1216150..1217154 1 NC_022648.1 catalyzes the DNA-template-directed extension of the 3'-end of a DNA strand; the delta' subunit seems to interact with the gamma subunit to transfer the beta subunit on the DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit delta' 1217154 17430007 P423_05910 Escherichia coli JJ1886 DNA polymerase III subunit delta' YP_008721225.1 1216150 D 1355100 CDS YP_008721226.1 556551208 17430008 1217165..1217962 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNAse 1217962 17430008 P423_05915 Escherichia coli JJ1886 DNAse YP_008721226.1 1217165 D 1355100 CDS YP_008721227.1 556551209 17430009 1218257..1219690 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIBC 1219690 17430009 P423_05920 Escherichia coli JJ1886 PTS glucose transporter subunit IIBC YP_008721227.1 1218257 D 1355100 CDS YP_008721228.1 556551210 17430010 complement(1219750..1221939) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferric-rhodotorulic acid outer membrane transporter 1221939 17430010 P423_05925 Escherichia coli JJ1886 ferric-rhodotorulic acid outer membrane transporter YP_008721228.1 1219750 R 1355100 CDS YP_008721229.1 556551211 17430011 1222273..1222632 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine nucleoside phosphoramidase 1222632 17430011 P423_05930 Escherichia coli JJ1886 purine nucleoside phosphoramidase YP_008721229.1 1222273 D 1355100 CDS YP_008721230.1 556551212 17430012 1222635..1223012 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1223012 17430012 P423_05935 Escherichia coli JJ1886 membrane protein YP_008721230.1 1222635 D 1355100 CDS YP_008721231.1 556551213 17430013 1223026..1223667 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein activator LpoB 1223667 17430013 P423_05940 Escherichia coli JJ1886 penicillin-binding protein activator LpoB YP_008721231.1 1223026 D 1355100 CDS YP_008721232.1 556551214 17430014 1223648..1224472 1 NC_022648.1 catalyzes the phosphorylation of thiamine to thiamine phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine kinase 1224472 thiK 17430014 thiK Escherichia coli JJ1886 thiamine kinase YP_008721232.1 1223648 D 1355100 CDS YP_008721233.1 556551215 17430015 1224483..1225508 1 NC_022648.1 hydrolyzes the terminal non-reducing N-acetyl-D-hexosamine residues in N-acetyl-beta-D-hexosaminides; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-hexosaminidase 1225508 17430015 P423_05950 Escherichia coli JJ1886 beta-hexosaminidase YP_008721233.1 1224483 D 1355100 CDS YP_008721234.1 556551216 17430016 1225531..1226073 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1226073 17430016 P423_05955 Escherichia coli JJ1886 hypothetical protein YP_008721234.1 1225531 D 1355100 CDS YP_008721235.1 556551217 17430017 1226472..1227776 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase 1227776 17430017 P423_05960 Escherichia coli JJ1886 NADH dehydrogenase YP_008721235.1 1226472 D 1355100 CDS YP_008721236.1 556551218 17430018 1228003..1228542 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1228542 17430018 P423_05965 Escherichia coli JJ1886 hypothetical protein YP_008721236.1 1228003 D 1355100 CDS YP_008721237.1 556551219 17430019 complement(1228604..1229314) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 1229314 17430019 P423_05970 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008721237.1 1228604 R 1355100 CDS YP_008721238.1 556551220 17430020 1229477..1229734 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multiple stress resistance protein BhsA 1229734 17430020 P423_05975 Escherichia coli JJ1886 multiple stress resistance protein BhsA YP_008721238.1 1229477 D 1355100 CDS YP_008721239.1 556551221 17430021 complement(1229817..1230779) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptigoglycan-binding protein LysM 1230779 17430021 P423_05980 Escherichia coli JJ1886 peptigoglycan-binding protein LysM YP_008721239.1 1229817 R 1355100 CDS YP_008721240.1 556551222 17430022 complement(1230922..1234440) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription-repair coupling factor 1234440 17430022 P423_05985 Escherichia coli JJ1886 transcription-repair coupling factor YP_008721240.1 1230922 R 1355100 CDS YP_008721241.1 556551223 17430023 complement(1234495..1235568) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1235568 17430023 P423_05990 Escherichia coli JJ1886 membrane protein YP_008721241.1 1234495 R 1355100 CDS YP_008721242.1 556551224 17430024 1235829..1237028 1 NC_022648.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1237028 17430024 P423_05995 Escherichia coli JJ1886 transporter YP_008721242.1 1235829 D 1355100 CDS YP_008721243.1 556551225 17430025 1237021..1237722 1 NC_022648.1 ATP-binding protein of an ATP-binding cassette transporter; when bound to FtsX, FtsEX localizes to the cell division site and plays a role in the assembly or stability of the septal ring under low-salt growth conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsE 1237722 17430025 P423_06000 Escherichia coli JJ1886 cell division protein FtsE YP_008721243.1 1237021 D 1355100 CDS YP_008721244.1 556551226 17430026 1237722..1238966 1 NC_022648.1 part of the ATP-dependent transport system LolCDE; responsible for the localization of lipoproteins to the periplasmic surface of the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1238966 17430026 P423_06005 Escherichia coli JJ1886 transporter YP_008721244.1 1237722 D 1355100 CDS YP_008721245.1 556551227 17430027 1238995..1239906 1 NC_022648.1 catalyzes the formation of N-acetyl-D-glucosamine-6-phosphate from N-acetyl-D-glucosamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyl-D-glucosamine kinase 1239906 17430027 P423_06010 Escherichia coli JJ1886 N-acetyl-D-glucosamine kinase YP_008721245.1 1238995 D 1355100 CDS YP_008721246.1 556551228 17430028 1239922..1240743 1 NC_022648.1 Modulates the activities of several enzymes which are inactive in their acetylated form; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent deacetylase 1240743 17430028 P423_06015 Escherichia coli JJ1886 NAD-dependent deacetylase YP_008721246.1 1239922 D 1355100 CDS YP_008721247.1 556551229 17430029 complement(1240881..1241669) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1241669 17430029 P423_06020 Escherichia coli JJ1886 membrane protein YP_008721247.1 1240881 R 1355100 CDS YP_008721248.1 556551230 17430030 complement(1241666..1242127) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1242127 17430030 P423_06025 Escherichia coli JJ1886 membrane protein YP_008721248.1 1241666 R 1355100 CDS YP_008721249.1 556551231 17430031 complement(1242185..1243231) 1 NC_022648.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotD is a periplasmic component that binds the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter substrate-binding protein 1243231 potD 17430031 potD Escherichia coli JJ1886 putrescine/spermidine ABC transporter substrate-binding protein YP_008721249.1 1242185 R 1355100 CDS YP_008721250.1 556551232 17430032 complement(1243228..1244022) 1 NC_022648.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotC is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 1244022 potC 17430032 potC Escherichia coli JJ1886 putrescine/spermidine ABC transporter permease YP_008721250.1 1243228 R 1355100 CDS YP_008721251.1 556551233 17430033 complement(1244019..1244876) 1 NC_022648.1 can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter permease 1244876 potB 17430033 potB Escherichia coli JJ1886 putrescine/spermidine ABC transporter permease YP_008721251.1 1244019 R 1355100 CDS YP_008721252.1 556551234 17430034 complement(1244860..1245996) 1 NC_022648.1 functions together with PotBCD (A2BCD) in ATP-dependent polyamine transport; PotA is the membrane-associated ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter ATPase 1245996 potA 17430034 potA Escherichia coli JJ1886 putrescine/spermidine ABC transporter ATPase YP_008721252.1 1244860 R 1355100 CDS YP_008721253.1 556551235 17430035 1246246..1247472 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase T 1247472 17430035 P423_06050 Escherichia coli JJ1886 peptidase T YP_008721253.1 1246246 D 1355100 CDS YP_008721254.1 556551236 17430036 complement(1247521..1248642) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1248642 17430036 P423_06055 Escherichia coli JJ1886 hypothetical protein YP_008721254.1 1247521 R 1355100 CDS YP_008721255.1 556551237 17430037 complement(1248718..1250178) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein PhoQ 1250178 17430037 P423_06060 Escherichia coli JJ1886 sensor protein PhoQ YP_008721255.1 1248718 R 1355100 CDS YP_008721256.1 556551238 17430038 complement(1250178..1250849) 1 NC_022648.1 response regulator in two-component regulatory system with PhoQ; involved in magnesium starvation and stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; PhoP family transcriptional regulator 1250849 17430038 P423_06065 Escherichia coli JJ1886 PhoP family transcriptional regulator YP_008721256.1 1250178 R 1355100 CDS YP_008721257.1 556551239 17430039 complement(1251018..1252388) 1 NC_022648.1 Catalyzes two discrete reactions in the de novo synthesis of purines: the cleavage of adenylosuccinate and succinylaminoimidazole carboxamide ribotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylosuccinate lyase 1252388 17430039 P423_06070 Escherichia coli JJ1886 adenylosuccinate lyase YP_008721257.1 1251018 R 1355100 CDS YP_008721258.1 556551240 17430040 complement(1252392..1253039) 1 NC_022648.1 HflD; UPF0274; in Escherichia coli this protein is peripherally associated with the membrane and appears to act with lambda CII protein; in Haemophilus influenzae a knockout of the HI0638 gene affected paracytosis; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysogenization regulator 1253039 17430040 P423_06075 Escherichia coli JJ1886 lysogenization regulator YP_008721258.1 1252392 R 1355100 CDS YP_008721259.1 556551241 17430041 complement(1253069..1254175) 1 NC_022648.1 catalyzes a sulfuration reaction to synthesize 2-thiouridine at the U34 position of tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiouridylase 1254175 mnmA 17430041 mnmA Escherichia coli JJ1886 thiouridylase YP_008721259.1 1253069 R 1355100 CDS YP_008721260.1 556551242 17430042 complement(1254229..1254690) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatase 1254690 17430042 P423_06085 Escherichia coli JJ1886 phosphatase YP_008721260.1 1254229 R 1355100 CDS YP_008721261.1 556551243 17430043 complement(1254700..1255353) 1 NC_022648.1 catalyzes the formation of pseudouridine from uracil-2457 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridine synthase E 1255353 17430043 P423_06090 Escherichia coli JJ1886 23S rRNA pseudouridine synthase E YP_008721261.1 1254700 R 1355100 CDS YP_008721262.1 556551244 17430044 1255525..1256775 1 NC_022648.1 Converts isocitrate to alpha ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate dehydrogenase 1256775 17430044 P423_06095 Escherichia coli JJ1886 isocitrate dehydrogenase YP_008721262.1 1255525 D 1355100 CDS YP_008721263.1 556551245 17430045 complement(1256889..1258031) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1258031 17430045 P423_06100 Escherichia coli JJ1886 integrase YP_008721263.1 1256889 R 1355100 CDS YP_008721264.1 556554404 17430046 complement(1258021..1258257) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; excisionase 1258257 17430046 P423_06105 Escherichia coli JJ1886 excisionase YP_008721264.1 1258021 R 1355100 CDS YP_008721265.1 556554405 17430047 complement(1258397..1258627) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1258627 17430047 P423_06110 Escherichia coli JJ1886 hypothetical protein YP_008721265.1 1258397 R 1355100 CDS YP_008721266.1 556551246 17430048 complement(1258620..1258946) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-binding protein 1258946 17430048 P423_06115 Escherichia coli JJ1886 RNA-binding protein YP_008721266.1 1258620 R 1355100 CDS YP_008721267.1 556551247 17430049 complement(1258946..1259167) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; conjugal transfer protein TraR 1259167 17430049 P423_06120 Escherichia coli JJ1886 conjugal transfer protein TraR YP_008721267.1 1258946 R 1355100 CDS YP_008721268.1 556554406 17430050 complement(1259174..1259269) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1259269 17430050 P423_06125 Escherichia coli JJ1886 hypothetical protein YP_008721268.1 1259174 R 1355100 CDS YP_008721269.1 556554407 17430051 complement(1259266..1259481) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1259481 17430051 P423_06130 Escherichia coli JJ1886 hypothetical protein YP_008721269.1 1259266 R 1355100 CDS YP_008721270.1 556554408 17430052 complement(1259478..1259561) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1259561 17430052 P423_06135 Escherichia coli JJ1886 hypothetical protein YP_008721270.1 1259478 R 1355100 CDS YP_008721271.1 556551248 17430053 complement(1259558..1259749) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1259749 17430053 P423_06140 Escherichia coli JJ1886 hypothetical protein YP_008721271.1 1259558 R 1355100 CDS YP_008721272.1 556551249 17430054 complement(1259722..1259904) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cruciferin 1259904 17430054 P423_06145 Escherichia coli JJ1886 cruciferin YP_008721272.1 1259722 R 1355100 CDS YP_008721273.1 556554409 17430055 complement(1259901..1260581) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; exonuclease 1260581 17430055 P423_06150 Escherichia coli JJ1886 exonuclease YP_008721273.1 1259901 R 1355100 CDS YP_008721274.1 556554410 17430056 complement(1260578..1261363) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; recombinase 1261363 17430056 P423_06155 Escherichia coli JJ1886 recombinase YP_008721274.1 1260578 R 1355100 CDS YP_008721275.1 556551250 17430057 complement(1261369..1261665) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host-nuclease inhibitor protein Gam 1261665 17430057 P423_06160 Escherichia coli JJ1886 host-nuclease inhibitor protein Gam YP_008721275.1 1261369 R 1355100 CDS YP_008721276.1 556551251 17430058 complement(1261741..1261947) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsZ 1261947 17430058 P423_06165 Escherichia coli JJ1886 cell division protein FtsZ YP_008721276.1 1261741 R 1355100 CDS YP_008721277.1 556551252 17430059 complement(1262543..1263298) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 1263298 17430059 P423_06170 Escherichia coli JJ1886 regulatory protein YP_008721277.1 1262543 R 1355100 CDS YP_008721278.1 556551253 17430060 1263337..1263567 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antirepressor 1263567 17430060 P423_06175 Escherichia coli JJ1886 antirepressor YP_008721278.1 1263337 D 1355100 CDS YP_008721279.1 556554411 17430061 1263637..1264176 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; regulator 1264176 17430061 P423_06180 Escherichia coli JJ1886 regulator YP_008721279.1 1263637 D 1355100 CDS YP_008721280.1 556551254 17430062 1264173..1265192 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Replication protein O 1265192 17430062 P423_06185 Escherichia coli JJ1886 Replication protein O YP_008721280.1 1264173 D 1355100 CDS YP_008721281.1 556551255 17430063 1265189..1265890 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Replication protein 14 1265890 17430063 P423_06190 Escherichia coli JJ1886 Replication protein 14 YP_008721281.1 1265189 D 1355100 CDS YP_008721282.1 556554412 17430064 1266140..1270405 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1270405 17430064 P423_06195 Escherichia coli JJ1886 hypothetical protein YP_008721282.1 1266140 D 1355100 CDS YP_008721283.1 556554413 17430065 complement(1270442..1271485) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Aes 1271485 17430065 P423_06200 Escherichia coli JJ1886 Aes YP_008721283.1 1270442 R 1355100 CDS YP_008721284.1 556554414 17430066 1271933..1272388 1 NC_022648.1 DLP12 prophage; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1272388 17430066 P423_06205 Escherichia coli JJ1886 hypothetical protein YP_008721284.1 1271933 D 1355100 CDS YP_008721285.1 556551256 17430067 1272388..1272558 1 NC_022648.1 DLP12 prophage; conserved protein similar to phage 82 and lambda proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1272558 17430067 P423_06210 Escherichia coli JJ1886 hypothetical protein YP_008721285.1 1272388 D 1355100 CDS YP_008721286.1 556551257 17430068 1272551..1272841 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1272841 17430068 P423_06215 Escherichia coli JJ1886 hypothetical protein YP_008721286.1 1272551 D 1355100 CDS YP_008721287.1 556551258 17430069 1272838..1273200 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; crossover junction endodeoxyribonuclease RusA 1273200 17430069 P423_06220 Escherichia coli JJ1886 crossover junction endodeoxyribonuclease RusA YP_008721287.1 1272838 D 1355100 CDS YP_008721288.1 556554415 17430070 1273197..1273337 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1273337 17430070 P423_06225 Escherichia coli JJ1886 hypothetical protein YP_008721288.1 1273197 D 1355100 CDS YP_008721289.1 556554416 17430071 1273334..1274023 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1274023 17430071 P423_06230 Escherichia coli JJ1886 hypothetical protein YP_008721289.1 1273334 D 1355100 CDS YP_008721290.1 556551259 17430072 1274345..1274650 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 1274650 17430072 P423_06235 Escherichia coli JJ1886 holin YP_008721290.1 1274345 D 1355100 CDS YP_008721291.1 556551260 17430073 1274637..1275113 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 1275113 17430073 P423_06240 Escherichia coli JJ1886 lysozyme YP_008721291.1 1274637 D 1355100 CDS YP_008721292.1 556551261 17430074 1275110..1275571 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 1275571 17430074 P423_06245 Escherichia coli JJ1886 endopeptidase YP_008721292.1 1275110 D 1355100 CDS YP_008721293.1 556551262 17430075 complement(1275603..1275896) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1275896 17430075 P423_06250 Escherichia coli JJ1886 hypothetical protein YP_008721293.1 1275603 R 1355100 CDS YP_008721294.1 556554417 17430076 1276323..1276703 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; cell envelope biogenesis protein TonB 1276703 17430076 P423_06255 Escherichia coli JJ1886 cell envelope biogenesis protein TonB YP_008721294.1 1276323 D 1355100 CDS YP_008721295.1 556554418 17430077 1276910..1277092 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1277092 17430077 P423_06260 Escherichia coli JJ1886 hypothetical protein YP_008721295.1 1276910 D 1355100 CDS YP_008721296.1 556554419 17430078 1277656..1278201 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; protein convertase 1278201 17430078 P423_06265 Escherichia coli JJ1886 protein convertase YP_008721296.1 1277656 D 1355100 CDS YP_008721297.1 556551263 17430079 1278176..1280101 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 1280101 17430079 P423_06270 Escherichia coli JJ1886 terminase YP_008721297.1 1278176 D 1355100 CDS YP_008721298.1 556551264 17430080 1280098..1280304 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head-tail joining protein 1280304 17430080 P423_06275 Escherichia coli JJ1886 head-tail joining protein YP_008721298.1 1280098 D 1355100 CDS YP_008721299.1 556551265 17430081 1280301..1281902 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; plasmid partitioning protein ParB 1281902 17430081 P423_06280 Escherichia coli JJ1886 plasmid partitioning protein ParB YP_008721299.1 1280301 D 1355100 CDS YP_008721300.1 556551266 17430082 1281883..1283202 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; capsid assembly protein 1283202 17430082 P423_06285 Escherichia coli JJ1886 capsid assembly protein YP_008721300.1 1281883 D 1355100 CDS YP_008721301.1 556551267 17430083 1283600..1284625 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head protein 1284625 17430083 P423_06290 Escherichia coli JJ1886 head protein YP_008721301.1 1283600 D 1355100 CDS YP_008721302.1 556551268 17430084 1284667..1285065 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-packaging protein FI 1285065 17430084 P423_06295 Escherichia coli JJ1886 DNA-packaging protein FI YP_008721302.1 1284667 D 1355100 CDS YP_008721303.1 556551269 17430085 1285077..1285430 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail attachment protein 1285430 17430085 P423_06300 Escherichia coli JJ1886 tail attachment protein YP_008721303.1 1285077 D 1355100 CDS YP_008721304.1 556551270 17430086 1285442..1286020 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1286020 17430086 P423_06305 Escherichia coli JJ1886 tail protein YP_008721304.1 1285442 D 1355100 CDS YP_008721305.1 556551271 17430087 1286017..1286412 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1286412 17430087 P423_06310 Escherichia coli JJ1886 tail protein YP_008721305.1 1286017 D 1355100 CDS YP_008721306.1 556551272 17430088 1286402..1287160 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1287160 17430088 P423_06315 Escherichia coli JJ1886 tail protein YP_008721306.1 1286402 D 1355100 CDS YP_008721307.1 556551273 17430089 1287176..1287598 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1287598 17430089 P423_06320 Escherichia coli JJ1886 tail protein YP_008721307.1 1287176 D 1355100 CDS YP_008721308.1 556551274 17430090 1287580..1288014 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1288014 17430090 P423_06325 Escherichia coli JJ1886 tail protein YP_008721308.1 1287580 D 1355100 CDS YP_008721309.1 556551275 17430091 1288007..1290568 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1290568 17430091 P423_06330 Escherichia coli JJ1886 hypothetical protein YP_008721309.1 1288007 D 1355100 CDS YP_008721310.1 556551276 17430092 1290565..1290894 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1290894 17430092 P423_06335 Escherichia coli JJ1886 tail protein YP_008721310.1 1290565 D 1355100 CDS YP_008721311.1 556551277 17430093 1290894..1291592 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1291592 17430093 P423_06340 Escherichia coli JJ1886 tail protein YP_008721311.1 1290894 D 1355100 CDS YP_008721312.1 556551278 17430094 1291597..1292340 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1292340 17430094 P423_06345 Escherichia coli JJ1886 tail protein YP_008721312.1 1291597 D 1355100 CDS YP_008721313.1 556554420 17430095 1292337..1292879 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 1292879 17430095 P423_06350 Escherichia coli JJ1886 tail protein YP_008721313.1 1292337 D 1355100 CDS YP_008721314.1 556551279 17430096 1292940..1296422 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host specificity protein J 1296422 17430096 P423_06355 Escherichia coli JJ1886 host specificity protein J YP_008721314.1 1292940 D 1355100 CDS YP_008721315.1 556551280 17430097 1296481..1298502 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1298502 17430097 P423_06360 Escherichia coli JJ1886 tail protein YP_008721315.1 1296481 D 1355100 CDS YP_008721316.1 556554421 17430098 1298499..1298777 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1298777 17430098 P423_06365 Escherichia coli JJ1886 hypothetical protein YP_008721316.1 1298499 D 1355100 CDS YP_008721317.1 556554422 17430099 1298790..1299083 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1299083 17430099 P423_06370 Escherichia coli JJ1886 hypothetical protein YP_008721317.1 1298790 D 1355100 CDS YP_008721318.1 556554423 17430100 complement(1299175..1300032) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1300032 17430100 P423_06375 Escherichia coli JJ1886 membrane protein YP_008721318.1 1299175 R 1355100 CDS YP_008721319.1 556554424 17430101 complement(1300029..1300886) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1300886 17430101 P423_06380 Escherichia coli JJ1886 membrane protein YP_008721319.1 1300029 R 1355100 CDS YP_008721320.1 556554425 17430102 complement(1300883..1301710) 1 NC_022648.1 with SitACD is involved in the transport of manganese and iron; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; manganese transporter 1301710 17430102 P423_06385 Escherichia coli JJ1886 manganese transporter YP_008721320.1 1300883 R 1355100 CDS YP_008721321.1 556554426 17430103 complement(1301710..1302624) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron ABC transporter substrate-binding protein 1302624 17430103 P423_06390 Escherichia coli JJ1886 iron ABC transporter substrate-binding protein YP_008721321.1 1301710 R 1355100 CDS YP_008721322.1 556554427 17430104 1303311..1304081 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1304081 17430104 P423_06395 Escherichia coli JJ1886 hypothetical protein YP_008721322.1 1303311 D 1355100 CDS YP_008721323.1 556554428 17430105 1304204..1304359 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1304359 17430105 P423_06400 Escherichia coli JJ1886 hypothetical protein YP_008721323.1 1304204 D 1355100 CDS YP_008721324.1 556554429 17430106 1304553..1304705 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; isocitrate dehydrogenase 1304705 17430106 P423_06405 Escherichia coli JJ1886 isocitrate dehydrogenase YP_008721324.1 1304553 D 1355100 CDS YP_008721325.1 556551281 17430107 complement(1304967..1305371) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1305371 17430107 P423_06410 Escherichia coli JJ1886 hypothetical protein YP_008721325.1 1304967 R 1355100 CDS YP_008721326.1 556551282 17430108 complement(1305592..1306323) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MerR family transcriptional regulator 1306323 17430108 P423_06415 Escherichia coli JJ1886 MerR family transcriptional regulator YP_008721326.1 1305592 R 1355100 CDS YP_008721327.1 556551283 17430109 complement(1306528..1307739) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate phosphodiesterase 1307739 17430109 P423_06420 Escherichia coli JJ1886 diguanylate phosphodiesterase YP_008721327.1 1306528 R 1355100 CDS YP_008721328.1 556551284 17430110 1308053..1308289 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; two-component-system connector protein YcgZ 1308289 17430110 P423_06425 Escherichia coli JJ1886 two-component-system connector protein YcgZ YP_008721328.1 1308053 D 1355100 CDS YP_008721329.1 556551285 17430111 1308332..1308604 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; two-component-system connector protein YmgA 1308604 17430111 P423_06430 Escherichia coli JJ1886 two-component-system connector protein YmgA YP_008721329.1 1308332 D 1355100 CDS YP_008721330.1 556551286 17430112 1308633..1308899 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; two-component-system connector protein AriR 1308899 17430112 P423_06435 Escherichia coli JJ1886 two-component-system connector protein AriR YP_008721330.1 1308633 D 1355100 CDS YP_008721331.1 556551287 17430113 1309012..1309260 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1309260 17430113 P423_06440 Escherichia coli JJ1886 hypothetical protein YP_008721331.1 1309012 D 1355100 CDS YP_008721332.1 556551288 17430114 1309756..1310451 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 1310451 17430114 P423_06445 Escherichia coli JJ1886 cyclic di-GMP phosphodiesterase YP_008721332.1 1309756 D 1355100 CDS YP_008721333.1 556551289 17430115 1310583..1310801 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1310801 17430115 P423_06450 Escherichia coli JJ1886 membrane protein YP_008721333.1 1310583 D 1355100 CDS YP_008721334.1 556554430 17430116 1310884..1311036 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1311036 17430116 P423_06455 Escherichia coli JJ1886 hypothetical protein YP_008721334.1 1310884 D 1355100 CDS YP_008721335.1 556554431 17430117 1312334..1312705 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; porin 1312705 17430117 P423_06460 Escherichia coli JJ1886 porin YP_008721335.1 1312334 D 1355100 CDS YP_008721336.1 556551290 17430118 complement(1312764..1313093) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1313093 17430118 P423_06465 Escherichia coli JJ1886 hypothetical protein YP_008721336.1 1312764 R 1355100 CDS YP_008721337.1 556551291 17430119 complement(1313103..1313447) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1313447 17430119 P423_06470 Escherichia coli JJ1886 hypothetical protein YP_008721337.1 1313103 R 1355100 CDS YP_008721338.1 556551292 17430120 complement(1314731..1314997) 1 NC_022648.1 works in conjunction with MinC and MinD to enable cell division at the midpoint of the long axis of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division topological specificity factor MinE 1314997 minE 17430120 minE Escherichia coli JJ1886 cell division topological specificity factor MinE YP_008721338.1 1314731 R 1355100 CDS YP_008721339.1 556551293 17430121 complement(1315001..1315813) 1 NC_022648.1 ATPase; with MinC inhibits cell division by blocking formation of the polar Z ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division inhibitor MinD 1315813 17430121 P423_06480 Escherichia coli JJ1886 cell division inhibitor MinD YP_008721339.1 1315001 R 1355100 CDS YP_008721340.1 556551294 17430122 complement(1315837..1316532) 1 NC_022648.1 blocks the formation of polar Z-ring septums; Derived by automated computational analysis using gene prediction method: Protein Homology.; septum formation inhibitor 1316532 minC 17430122 minC Escherichia coli JJ1886 septum formation inhibitor YP_008721340.1 1315837 R 1355100 CDS YP_008721341.1 556551295 17430123 1317052..1317420 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1317420 17430123 P423_06490 Escherichia coli JJ1886 hypothetical protein YP_008721341.1 1317052 D 1355100 CDS YP_008721342.1 556551296 17430124 complement(1317523..1317924) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Inhibitor of g-type lysozyme 1317924 17430124 P423_06495 Escherichia coli JJ1886 Inhibitor of g-type lysozyme YP_008721342.1 1317523 R 1355100 CDS YP_008721343.1 556551297 17430125 1317995..1318153 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1318153 17430125 P423_06500 Escherichia coli JJ1886 hypothetical protein YP_008721343.1 1317995 D 1355100 CDS YP_008721344.1 556551298 17430126 1318132..1318458 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1318458 17430126 P423_06505 Escherichia coli JJ1886 hypothetical protein YP_008721344.1 1318132 D 1355100 CDS YP_008721345.1 556551299 17430127 1318530..1319189 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1319189 17430127 P423_06510 Escherichia coli JJ1886 hypothetical protein YP_008721345.1 1318530 D 1355100 CDS YP_008721346.1 556551300 17430128 1319266..1319727 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1319727 17430128 P423_06515 Escherichia coli JJ1886 hypothetical protein YP_008721346.1 1319266 D 1355100 CDS YP_008721347.1 556551301 17430129 complement(1319934..1320215) 1 NC_022648.1 Acts by forming a pore-like structure upon contact with mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology.; hemolysin activation protein 1320215 hlyE 17430129 hlyE Escherichia coli JJ1886 hemolysin activation protein YP_008721347.1 1319934 R 1355100 CDS YP_008721348.1 556551302 17430130 1320520..1320939 1 NC_022648.1 binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase V subunit UmuD 1320939 17430130 P423_06525 Escherichia coli JJ1886 DNA polymerase V subunit UmuD YP_008721348.1 1320520 D 1355100 CDS YP_008721349.1 556551303 17430131 1320939..1322207 1 NC_022648.1 binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase V subunit UmuC 1322207 17430131 P423_06530 Escherichia coli JJ1886 DNA polymerase V subunit UmuC YP_008721349.1 1320939 D 1355100 CDS YP_008721350.1 556551304 17430132 complement(1322252..1322782) 1 NC_022648.1 disulfide oxidoreductase; integral membrane protein; required for perioplasmic disulfide bond formation; oxidizes DsbA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; disulfide bond formation protein DsbB 1322782 17430132 P423_06535 Escherichia coli JJ1886 disulfide bond formation protein DsbB YP_008721350.1 1322252 R 1355100 CDS YP_008721351.1 556551305 17430133 complement(1322928..1324469) 1 NC_022648.1 involved in regulation of intracellular pH under alkaline conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 1324469 nhaB 17430133 nhaB Escherichia coli JJ1886 sodium:proton antiporter YP_008721351.1 1322928 R 1355100 CDS YP_008721352.1 556551306 17430134 1324691..1325410 1 NC_022648.1 Multifunctional regulator of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; fatty acid metabolism regulator 1325410 17430134 P423_06545 Escherichia coli JJ1886 fatty acid metabolism regulator YP_008721352.1 1324691 D 1355100 CDS YP_008721353.1 556551307 17430135 complement(1325462..1326994) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; SpoVR family protein 1326994 17430135 P423_06550 Escherichia coli JJ1886 SpoVR family protein YP_008721353.1 1325462 R 1355100 CDS YP_008721354.1 556551308 17430136 1327324..1328622 1 NC_022648.1 catalyzes the oxidative deamination of D-amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-amino acid dehydrogenase small subunit 1328622 17430136 P423_06555 Escherichia coli JJ1886 D-amino acid dehydrogenase small subunit YP_008721354.1 1327324 D 1355100 CDS YP_008721355.1 556551309 17430137 1328632..1329702 1 NC_022648.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine racemase 1329702 17430137 P423_06560 Escherichia coli JJ1886 alanine racemase YP_008721355.1 1328632 D 1355100 CDS YP_008721356.1 556551310 17430138 complement(1329759..1331495) 1 NC_022648.1 the Vibrio parahaemolyticus gene VP2867 was found to be a potassium/proton antiporter; can rapidly extrude potassium against a potassium gradient at alkaline pH when cloned and expressed in Escherichia coli; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium:proton antiporter 1331495 cvrA 17430138 cvrA Escherichia coli JJ1886 potassium:proton antiporter YP_008721356.1 1329759 R 1355100 CDS YP_008721357.1 556551311 17430139 complement(1331590..1332504) 1 NC_022648.1 catalyzes the release of D-alanine from L-alanyl-D-glutamyl-meso-diaminopimelyl-D-alanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L,D-carboxypeptidase A 1332504 ldcA 17430139 ldcA Escherichia coli JJ1886 L,D-carboxypeptidase A YP_008721357.1 1331590 R 1355100 CDS YP_008721358.1 556551312 17430140 1332604..1333215 1 NC_022648.1 catalyzes the cleavage of 1-4 beta-glycoside linkaged between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; lytic murein endotransglycosylase E 1333215 emtA 17430140 emtA Escherichia coli JJ1886 lytic murein endotransglycosylase E YP_008721358.1 1332604 D 1355100 CDS YP_008721359.1 556551313 17430141 complement(1333217..1333951) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar brake protein YcgR 1333951 17430141 P423_06580 Escherichia coli JJ1886 flagellar brake protein YcgR YP_008721359.1 1333217 R 1355100 CDS YP_008721360.1 556551314 17430142 1334152..1334406 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1334406 17430142 P423_06585 Escherichia coli JJ1886 hypothetical protein YP_008721360.1 1334152 D 1355100 CDS YP_008721361.1 556551315 17430143 complement(1334456..1336426) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TonB-dependent receptor 1336426 17430143 P423_06590 Escherichia coli JJ1886 TonB-dependent receptor YP_008721361.1 1334456 R 1355100 CDS YP_008721362.1 556551316 17430144 complement(1336452..1337306) 1 NC_022648.1 involved in molybdenum transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdenum transporter 1337306 17430144 P423_06595 Escherichia coli JJ1886 molybdenum transporter YP_008721362.1 1336452 R 1355100 CDS YP_008721363.1 556551317 17430145 complement(1337303..1338115) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 1338115 17430145 P423_06600 Escherichia coli JJ1886 methyltransferase YP_008721363.1 1337303 R 1355100 CDS YP_008721364.1 556554432 17430146 complement(1338125..1338883) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron ABC transporter ATP-binding protein 1338883 17430146 P423_06605 Escherichia coli JJ1886 iron ABC transporter ATP-binding protein YP_008721364.1 1338125 R 1355100 CDS YP_008721365.1 556551318 17430147 complement(1338880..1339860) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 1339860 17430147 P423_06610 Escherichia coli JJ1886 peptide ABC transporter substrate-binding protein YP_008721365.1 1338880 R 1355100 CDS YP_008721366.1 556551319 17430148 complement(1339860..1340882) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 1340882 17430148 P423_06615 Escherichia coli JJ1886 ABC transporter ATP-binding protein YP_008721366.1 1339860 R 1355100 CDS YP_008721367.1 556551320 17430149 complement(1341212..1342909) 1 NC_022648.1 periplasmic; catalyzes the hydrolysis of trehalose to glucose which can then be imported into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalase 1342909 treA 17430149 treA Escherichia coli JJ1886 trehalase YP_008721367.1 1341212 R 1355100 CDS YP_008721368.1 556551321 17430150 complement(1343229..1344647) 1 NC_022648.1 phosphotransferaese subunit; phosphorylates dihydroxyacetone along with DhaK/DhaL; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxyacetone kinase subunit M 1344647 17430150 P423_06630 Escherichia coli JJ1886 dihydroxyacetone kinase subunit M YP_008721368.1 1343229 R 1355100 CDS YP_008721369.1 556551322 17430151 complement(1344658..1345290) 1 NC_022648.1 with DhaK and DhaM catalyzes the phosphorylation of dihydroxyacetone; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxyacetone kinase subunit DhaL 1345290 17430151 P423_06635 Escherichia coli JJ1886 dihydroxyacetone kinase subunit DhaL YP_008721369.1 1344658 R 1355100 CDS YP_008721370.1 556554433 17430152 complement(1345301..1346371) 1 NC_022648.1 with DhaL and DhaM forms dihydroxyacetone kinase, which is responsible for phosphorylating dihydroxyacetone; DhaK is the dihydroxyacetone binding subunit of the dihydroxyacetone kinase; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dihydroxyacetone kinase subunit K 1346371 17430152 P423_06640 Escherichia coli JJ1886 dihydroxyacetone kinase subunit K YP_008721370.1 1345301 R 1355100 CDS YP_008721371.1 556551323 17430153 1346599..1348518 1 NC_022648.1 Positively regulates the dhaKLM operon from a sigma-70 promoter; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 1348518 17430153 P423_06645 Escherichia coli JJ1886 Fis family transcriptional regulator YP_008721371.1 1346599 D 1355100 CDS YP_008721372.1 556554434 17430154 complement(1349021..1349173) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1349173 17430154 P423_06650 Escherichia coli JJ1886 hypothetical protein YP_008721372.1 1349021 R 1355100 CDS YP_008721373.1 556554435 17430155 1349810..1351567 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ribonuclease H 1351567 17430155 P423_06655 Escherichia coli JJ1886 ribonuclease H YP_008721373.1 1349810 D 1355100 CDS YP_008721374.1 556554436 17430156 1351814..1352941 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1352941 17430156 P423_06660 Escherichia coli JJ1886 hypothetical protein YP_008721374.1 1351814 D 1355100 CDS YP_008721375.1 556554437 17430157 1352938..1353453 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1353453 17430157 P423_06665 Escherichia coli JJ1886 hypothetical protein YP_008721375.1 1352938 D 1355100 CDS YP_008721376.1 556554438 17430158 1353455..1355341 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1355341 17430158 P423_06670 Escherichia coli JJ1886 hypothetical protein YP_008721376.1 1353455 D 1355100 CDS YP_008721377.1 556554439 17430159 complement(1355909..1356154) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1356154 17430159 P423_06675 Escherichia coli JJ1886 hypothetical protein YP_008721377.1 1355909 R 1355100 CDS YP_008721378.1 556554440 17430160 complement(1356221..1356556) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1356556 17430160 P423_06680 Escherichia coli JJ1886 hypothetical protein YP_008721378.1 1356221 R 1355100 CDS YP_008721379.1 556554441 17430161 complement(1356587..1356946) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; acyl-CoA dehydrogenase 1356946 17430161 P423_06685 Escherichia coli JJ1886 acyl-CoA dehydrogenase YP_008721379.1 1356587 R 1355100 CDS YP_008721380.1 556554442 17430162 complement(1356961..1357488) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1357488 17430162 P423_06690 Escherichia coli JJ1886 hypothetical protein YP_008721380.1 1356961 R 1355100 CDS YP_008721381.1 556551324 17430163 complement(1357500..1357769) 1 NC_022648.1 activator of maltose metabolism genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1357769 17430163 P423_06695 Escherichia coli JJ1886 transcriptional regulator YP_008721381.1 1357500 R 1355100 CDS YP_008721382.1 556554443 17430164 1357891..1358379 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1358379 17430164 P423_06700 Escherichia coli JJ1886 hypothetical protein YP_008721382.1 1357891 D 1355100 CDS YP_008721383.1 556554444 17430165 1358704..1359126 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1359126 17430165 P423_06705 Escherichia coli JJ1886 hypothetical protein YP_008721383.1 1358704 D 1355100 CDS YP_008721384.1 556554445 17430166 1359246..1359707 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1359707 17430166 P423_06710 Escherichia coli JJ1886 hypothetical protein YP_008721384.1 1359246 D 1355100 CDS YP_008721385.1 556551325 17430167 1359709..1360161 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1360161 17430167 P423_06715 Escherichia coli JJ1886 hypothetical protein YP_008721385.1 1359709 D 1355100 CDS YP_008721386.1 556554446 17430168 1360223..1361137 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; integrase 1361137 17430168 P423_06720 Escherichia coli JJ1886 integrase YP_008721386.1 1360223 D 1355100 CDS YP_008721387.1 556554447 17430169 complement(1361124..1361738) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1361738 17430169 P423_06725 Escherichia coli JJ1886 hypothetical protein YP_008721387.1 1361124 R 1355100 CDS YP_008721388.1 556554448 17430170 1361961..1362158 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 1362158 17430170 P423_06730 Escherichia coli JJ1886 transcriptional regulator YP_008721388.1 1361961 D 1355100 CDS YP_008721389.1 556554449 17430171 1362160..1362627 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1362627 17430171 P423_06735 Escherichia coli JJ1886 hypothetical protein YP_008721389.1 1362160 D 1355100 CDS YP_008721390.1 556554450 17430172 1362715..1363569 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1363569 17430172 P423_06740 Escherichia coli JJ1886 hypothetical protein YP_008721390.1 1362715 D 1355100 CDS YP_008721391.1 556554451 17430173 1364170..1365543 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1365543 17430173 P423_06745 Escherichia coli JJ1886 hypothetical protein YP_008721391.1 1364170 D 1355100 CDS YP_008721392.1 556554452 17430174 1365803..1366402 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS30 1366402 17430174 P423_06750 Escherichia coli JJ1886 transposase IS30 YP_008721392.1 1365803 D 1355100 CDS YP_008721393.1 556554453 17430175 1366540..1369197 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta-carotene 15,15-monooxygenase 1369197 17430175 P423_06755 Escherichia coli JJ1886 beta-carotene 15,15-monooxygenase YP_008721393.1 1366540 D 1355100 CDS YP_008721394.1 556554454 17430176 1369194..1369406 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1369406 17430176 P423_06760 Escherichia coli JJ1886 hypothetical protein YP_008721394.1 1369194 D 1355100 CDS YP_008721395.1 556554455 17430177 1369420..1370589 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1370589 17430177 P423_06765 Escherichia coli JJ1886 membrane protein YP_008721395.1 1369420 D 1355100 CDS YP_008721396.1 556554456 17430178 1370713..1370892 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1370892 17430178 P423_06770 Escherichia coli JJ1886 hypothetical protein YP_008721396.1 1370713 D 1355100 CDS YP_008721397.1 556554457 17430179 1371471..1371722 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS100 1371722 17430179 P423_06775 Escherichia coli JJ1886 transposase IS100 YP_008721397.1 1371471 D 1355100 CDS YP_008721398.1 556554458 17430180 1371857..1372027 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1372027 17430180 P423_06780 Escherichia coli JJ1886 hypothetical protein YP_008721398.1 1371857 D 1355100 CDS YP_008721399.1 556551326 17430181 complement(1372345..1373148) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1373148 17430181 P423_06785 Escherichia coli JJ1886 integrase YP_008721399.1 1372345 R 1355100 CDS YP_008721400.1 556554459 17430182 complement(1373196..1373480) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 1373480 17430182 P423_06790 Escherichia coli JJ1886 transposase YP_008721400.1 1373196 R 1355100 CDS YP_008721401.1 556551327 17430183 complement(1373591..1374766) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1374766 17430183 P423_06795 Escherichia coli JJ1886 integrase YP_008721401.1 1373591 R 1355100 CDS YP_008721402.1 556551328 17430184 complement(1374981..1376072) 1 NC_022648.1 EngD; translation-associated GTPase; the crystal structure of the Haemophilus influenzae YchF protein showed similarity to the yeast structure (PDB: 1NI3); fluorescence spectroscopy revealed nucleic acid binding; the yeast protein YBR025c interacts with the translation elongation factor eEF1; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein YchF 1376072 ychF 17430184 ychF Escherichia coli JJ1886 GTP-binding protein YchF YP_008721402.1 1374981 R 1355100 CDS YP_008721403.1 556551329 17430185 complement(1376189..1376773) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-tRNA hydrolase 1376773 17430185 P423_06805 Escherichia coli JJ1886 peptidyl-tRNA hydrolase YP_008721403.1 1376189 R 1355100 CDS YP_008721404.1 556551330 17430186 1377051..1377329 1 NC_022648.1 YchH; transcription activated by CRP (cyclic AMP receptor protein), a global transcription factor involved in regulation of metabolism in enteric bacteria; ychH presents a class II promoter to bind CRP; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1377329 17430186 P423_06810 Escherichia coli JJ1886 membrane protein YP_008721404.1 1377051 D 1355100 CDS YP_008721405.1 556551331 17430187 complement(1377384..1379063) 1 NC_022648.1 role in sulfate transport across the inner membrane; member of the SulP family of sulfate transporters; seems to mediate transport via sulfate/proton symport; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1379063 17430187 P423_06815 Escherichia coli JJ1886 transporter YP_008721405.1 1377384 R 1355100 CDS YP_008721406.1 556551332 17430188 complement(1379188..1380201) 1 NC_022648.1 catalyzes the formation of 5-phospho-alpha-D-ribose 1-phosphate from D-ribose 5-phosphate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose-phosphate pyrophosphokinase 1380201 17430188 P423_06820 Escherichia coli JJ1886 ribose-phosphate pyrophosphokinase YP_008721406.1 1379188 R 1355100 CDS YP_008721407.1 556551333 17430189 complement(1380286..1381137) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; kinase 1381137 17430189 P423_06825 Escherichia coli JJ1886 kinase YP_008721407.1 1380286 R 1355100 CDS YP_008721408.1 556551334 17430190 complement(1381137..1381826) 1 NC_022648.1 Incorporates lipoproteins in the outer membrane after they are released by the LolA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein LolB 1381826 lolB 17430190 lolB Escherichia coli JJ1886 outer membrane lipoprotein LolB YP_008721408.1 1381137 R 1355100 CDS YP_008721409.1 556551335 17430191 1381974..1383230 1 NC_022648.1 catalyzes the formation of glutamate-1-semialdehyde from glutamyl-tRNA(Glu) and NADPH; the second step of the pathway is catalyzed by glutamate-1-semialdehyde aminomutase which results in the formation of 5-aminolevulinic acid; functions in porphyrin (tetrapyrroles) biosynthesis; the crystal structure showed a C-terminal dimerization domain that appears to be absent in Chlamydial proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamyl-tRNA reductase 1383230 hemA 17430191 hemA Escherichia coli JJ1886 glutamyl-tRNA reductase YP_008721409.1 1381974 D 1355100 CDS YP_008721410.1 556551336 17430192 1383272..1384354 1 NC_022648.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 1 1384354 prfA 17430192 prfA Escherichia coli JJ1886 peptide chain release factor 1 YP_008721410.1 1383272 D 1355100 CDS YP_008721411.1 556551337 17430193 1384354..1385187 1 NC_022648.1 HemK; PrmC; transfers a methyl group from S-adenosylmethionine to amide nitrogen of specific glutamine residues in protein chain release factors PrfA and PrfB; Derived by automated computational analysis using gene prediction method: Protein Homology.; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 1385187 17430193 P423_06845 Escherichia coli JJ1886 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_008721411.1 1384354 D 1355100 CDS YP_008721412.1 556551338 17430194 1385184..1385576 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1385576 17430194 P423_06850 Escherichia coli JJ1886 hypothetical protein YP_008721412.1 1385184 D 1355100 CDS YP_008721413.1 556551339 17430195 1385580..1386389 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1386389 17430195 P423_06855 Escherichia coli JJ1886 hypothetical protein YP_008721413.1 1385580 D 1355100 CDS YP_008721414.1 556551340 17430196 1386425..1387279 1 NC_022648.1 catalyzes the formation of 2-dehydro-3-deoxy-D-octonate 8-phosphate from phosphoenolpyruvate and D-arabinose 5-phosphate in LPS biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydro-3-deoxyphosphooctonate aldolase 1387279 17430196 P423_06860 Escherichia coli JJ1886 2-dehydro-3-deoxyphosphooctonate aldolase YP_008721414.1 1386425 D 1355100 CDS YP_008721415.1 556554460 17430197 complement(1387428..1387562) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1387562 17430197 P423_06865 Escherichia coli JJ1886 hypothetical protein YP_008721415.1 1387428 R 1355100 CDS YP_008721416.1 556551341 17430198 complement(1387940..1389040) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 1389040 17430198 P423_06870 Escherichia coli JJ1886 sodium:proton antiporter YP_008721416.1 1387940 R 1355100 CDS YP_008721417.1 556551342 17430199 1389310..1389549 1 NC_022648.1 in Escherichia coli this protein putatively regulates the sodium/proton (also pH-independent calcium/proton) antiporter chaA; has weak affinity for calcium and magnesium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; cation transport regulator 1389549 chaB 17430199 chaB Escherichia coli JJ1886 cation transport regulator YP_008721417.1 1389310 D 1355100 CDS YP_008721418.1 556551343 17430200 1389698..1390393 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1390393 17430200 P423_06880 Escherichia coli JJ1886 transporter YP_008721418.1 1389698 D 1355100 CDS YP_008721419.1 556551344 17430201 complement(1390437..1390790) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1390790 17430201 P423_06885 Escherichia coli JJ1886 hypothetical protein YP_008721419.1 1390437 R 1355100 CDS YP_008721420.1 556551345 17430202 1390975..1392369 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; invasin 1392369 17430202 P423_06890 Escherichia coli JJ1886 invasin YP_008721420.1 1390975 D 1355100 CDS YP_008721421.1 556551346 17430203 complement(1392370..1393020) 1 NC_022648.1 two-component response regulator NarL; phosphorylated by NarQ; activates transcription of nitrate and nitrite reductase genes and represses transcription of fumarate reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1393020 17430203 P423_06895 Escherichia coli JJ1886 transcriptional regulator YP_008721421.1 1392370 R 1355100 CDS YP_008721422.1 556551347 17430204 complement(1393013..1394809) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate/nitrite sensor protein NarX 1394809 17430204 P423_06900 Escherichia coli JJ1886 nitrate/nitrite sensor protein NarX YP_008721422.1 1393013 R 1355100 CDS YP_008721423.1 556551348 17430205 1395148..1396539 1 NC_022648.1 involved in the transport of nitrate and nitrite; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate transporter 1396539 17430205 P423_06905 Escherichia coli JJ1886 nitrate transporter YP_008721423.1 1395148 D 1355100 CDS YP_008721424.1 556551349 17430206 1396932..1400675 1 NC_022648.1 with NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit alpha 1400675 narZ 17430206 narZ Escherichia coli JJ1886 nitrate reductase A subunit alpha YP_008721424.1 1396932 D 1355100 CDS YP_008721425.1 556551350 17430207 1400672..1402210 1 NC_022648.1 with NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit beta 1402210 narH 17430207 narH Escherichia coli JJ1886 nitrate reductase A subunit beta YP_008721425.1 1400672 D 1355100 CDS YP_008721426.1 556551351 17430208 1402207..1402917 1 NC_022648.1 delta subunit of nitrate reductase 1; chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase molybdenum cofactor assembly chaperone NarJ 1402917 17430208 P423_06920 Escherichia coli JJ1886 nitrate reductase molybdenum cofactor assembly chaperone NarJ YP_008721426.1 1402207 D 1355100 CDS YP_008721427.1 556551352 17430209 1402917..1403594 1 NC_022648.1 with NarGJH catalyzes the reduction of nitrate; the gamma subunit localizes NarGHI to the membrane; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit gamma 1403594 narI 17430209 narI Escherichia coli JJ1886 nitrate reductase A subunit gamma YP_008721427.1 1402917 D 1355100 CDS YP_008721428.1 556554461 17430210 1403722..1404729 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 3-oxoacyl-ACP synthase 1404729 17430210 P423_06930 Escherichia coli JJ1886 3-oxoacyl-ACP synthase YP_008721428.1 1403722 D 1355100 CDS YP_008721429.1 556551353 17430211 1404726..1405742 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1405742 17430211 P423_06935 Escherichia coli JJ1886 hypothetical protein YP_008721429.1 1404726 D 1355100 CDS YP_008721430.1 556554462 17430212 1405720..1406526 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; metallo-beta-lactamase 1406526 17430212 P423_06940 Escherichia coli JJ1886 metallo-beta-lactamase YP_008721430.1 1405720 D 1355100 CDS YP_008721431.1 556554463 17430213 1406523..1407809 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; coenzyme F390 synthetase 1407809 17430213 P423_06945 Escherichia coli JJ1886 coenzyme F390 synthetase YP_008721431.1 1406523 D 1355100 CDS YP_008721432.1 556554464 17430214 1407806..1408408 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; acid phosphatase 1408408 17430214 P423_06950 Escherichia coli JJ1886 acid phosphatase YP_008721432.1 1407806 D 1355100 CDS YP_008721433.1 556554465 17430215 1408401..1409525 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fatty acid hydroxylase 1409525 17430215 P423_06955 Escherichia coli JJ1886 fatty acid hydroxylase YP_008721433.1 1408401 D 1355100 CDS YP_008721434.1 556554466 17430216 1409512..1410603 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; linoleoyl-CoA desaturase 1410603 17430216 P423_06960 Escherichia coli JJ1886 linoleoyl-CoA desaturase YP_008721434.1 1409512 D 1355100 CDS YP_008721435.1 556551354 17430218 complement(1410864..1411706) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formyltetrahydrofolate deformylase 1411706 17430218 P423_06970 Escherichia coli JJ1886 formyltetrahydrofolate deformylase YP_008721435.1 1410864 R 1355100 CDS YP_008721436.1 556554467 17430219 complement(1411756..1412115) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1412115 17430219 P423_06975 Escherichia coli JJ1886 hypothetical protein YP_008721436.1 1411756 R 1355100 CDS YP_008721437.1 556551355 17430220 1412327..1413232 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1413232 17430220 P423_06980 Escherichia coli JJ1886 hypothetical protein YP_008721437.1 1412327 D 1355100 CDS YP_008721438.1 556551356 17430221 1413324..1414337 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; response regulator 1414337 17430221 P423_06985 Escherichia coli JJ1886 response regulator YP_008721438.1 1413324 D 1355100 CDS YP_008721439.1 556551357 17430222 1414539..1415447 1 NC_022648.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 1415447 17430222 P423_06990 Escherichia coli JJ1886 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_008721439.1 1414539 D 1355100 CDS YP_008721440.1 556551358 17430223 complement(1415592..1416005) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1416005 17430223 P423_06995 Escherichia coli JJ1886 DNA-binding protein YP_008721440.1 1415592 R 1355100 CDS YP_008721441.1 556551359 17430224 1416609..1417226 1 NC_022648.1 catalyzes the formation of thymidine 5'-phosphate from thymidine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidine kinase 1417226 17430224 P423_07000 Escherichia coli JJ1886 thymidine kinase YP_008721441.1 1416609 D 1355100 CDS YP_008721442.1 556551360 17430226 complement(1418684..1421359) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetaldehyde dehydrogenase 1421359 17430226 P423_07010 Escherichia coli JJ1886 acetaldehyde dehydrogenase YP_008721442.1 1418684 R 1355100 CDS YP_008721443.1 556551361 17430227 1421836..1422483 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1422483 17430227 P423_07015 Escherichia coli JJ1886 membrane protein YP_008721443.1 1421836 D 1355100 CDS YP_008721444.1 556551362 17430228 1423176..1424852 1 NC_022648.1 is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 1424852 17430228 P423_07020 Escherichia coli JJ1886 peptide ABC transporter substrate-binding protein YP_008721444.1 1423176 D 1355100 CDS YP_008721445.1 556551363 17430229 1424938..1425858 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1425858 oppB 17430229 oppB Escherichia coli JJ1886 peptide ABC transporter permease YP_008721445.1 1424938 D 1355100 CDS YP_008721446.1 556551364 17430230 1425873..1426781 1 NC_022648.1 with OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1426781 17430230 P423_07030 Escherichia coli JJ1886 peptide ABC transporter permease YP_008721446.1 1425873 D 1355100 CDS YP_008721447.1 556551365 17430231 1426793..1427806 1 NC_022648.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1427806 dppD 17430231 dppD Escherichia coli JJ1886 peptide ABC transporter ATP-binding protein YP_008721447.1 1426793 D 1355100 CDS YP_008721448.1 556551366 17430232 1427803..1428807 1 NC_022648.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1428807 dppF 17430232 dppF Escherichia coli JJ1886 peptide ABC transporter ATP-binding protein YP_008721448.1 1427803 D 1355100 CDS YP_008721449.1 556551367 17430233 complement(1428860..1429189) 1 NC_022648.1 highly acidic protein; the structure of the Haemophilus influenzae protein shows similarity to uracil DNA glycosylase inhibitor (Ugi); binds heat-unstable protein (HU-alpha) which is a histone-like protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; dsDNA-mimic protein 1429189 17430233 P423_07045 Escherichia coli JJ1886 dsDNA-mimic protein YP_008721449.1 1428860 R 1355100 CDS YP_008721450.1 556551368 17430234 complement(1429224..1430684) 1 NC_022648.1 catalyzes the transfer of a phosphatidyl group to phosphodidylglycerol to form cardiolipin (diphosphatidylglycerol); Derived by automated computational analysis using gene prediction method: Protein Homology.; cardiolipin synthetase 1430684 cls 17430234 cls Escherichia coli JJ1886 cardiolipin synthetase YP_008721450.1 1429224 R 1355100 CDS YP_008721451.1 556551369 17430235 complement(1431055..1432308) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; voltage-gated potassium channel 1432308 17430235 P423_07055 Escherichia coli JJ1886 voltage-gated potassium channel YP_008721451.1 1431055 R 1355100 CDS YP_008721452.1 556551370 17430236 complement(1432608..1432904) 1 NC_022648.1 unknown function; YciI from Haemophilus influenzae presents crystal structure similarity to a muconolactone isomerase, but does not seem to catalyze any of the predicted reactions based on sequence and structure similarity; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1432904 17430236 P423_07060 Escherichia coli JJ1886 hypothetical protein YP_008721452.1 1432608 R 1355100 CDS YP_008721453.1 556551371 17430237 1433113..1433844 1 NC_022648.1 membrane spanning protein in TonB-ExbB-ExbD complex; transduces proton motive force of the cytoplasmic membrane to outer membrane transporters; involved in the transport of ron-siderophore complexes, vitamin B12 and colicins; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1433844 17430237 P423_07065 Escherichia coli JJ1886 transporter YP_008721453.1 1433113 D 1355100 CDS YP_008721454.1 556551372 17430238 complement(1433884..1434282) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 1434282 17430238 P423_07070 Escherichia coli JJ1886 acyl-CoA esterase YP_008721454.1 1433884 R 1355100 CDS YP_008721455.1 556551373 17430239 complement(1434387..1434926) 1 NC_022648.1 Involved in cell division; probably involved in intracellular septation; Derived by automated computational analysis using gene prediction method: Protein Homology.; intracellular septation protein A 1434926 17430239 P423_07075 Escherichia coli JJ1886 intracellular septation protein A YP_008721455.1 1434387 R 1355100 CDS YP_008721456.1 556551374 17430240 complement(1434956..1435699) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1435699 17430240 P423_07080 Escherichia coli JJ1886 membrane protein YP_008721456.1 1434956 R 1355100 CDS YP_008721457.1 556551375 17430241 1436055..1436693 1 NC_022648.1 receptor for colicin S4; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane protein W 1436693 17430241 P423_07085 Escherichia coli JJ1886 outer membrane protein W YP_008721457.1 1436055 D 1355100 CDS YP_008721458.1 556551376 17430242 complement(1436739..1437869) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 1437869 17430242 P423_07090 Escherichia coli JJ1886 integrase YP_008721458.1 1436739 R 1355100 CDS YP_008721459.1 556554468 17430243 complement(1437847..1438095) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; excisionase 1438095 17430243 P423_07095 Escherichia coli JJ1886 excisionase YP_008721459.1 1437847 R 1355100 CDS YP_008721460.1 556551377 17430244 complement(1438160..1440631) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1440631 17430244 P423_07100 Escherichia coli JJ1886 hypothetical protein YP_008721460.1 1438160 R 1355100 CDS YP_008721461.1 556551378 17430245 complement(1440724..1440915) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1440915 17430245 P423_07105 Escherichia coli JJ1886 hypothetical protein YP_008721461.1 1440724 R 1355100 CDS YP_008721462.1 556551379 17430246 complement(1440912..1441100) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division inhibition protein DicB 1441100 17430246 P423_07110 Escherichia coli JJ1886 cell division inhibition protein DicB YP_008721462.1 1440912 R 1355100 CDS YP_008721463.1 556551380 17430247 complement(1441666..1441884) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1441884 17430247 P423_07115 Escherichia coli JJ1886 hypothetical protein YP_008721463.1 1441666 R 1355100 CDS YP_008721464.1 556551381 17430248 complement(1441914..1442042) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1442042 17430248 P423_07120 Escherichia coli JJ1886 hypothetical protein YP_008721464.1 1441914 R 1355100 CDS YP_008721465.1 556551382 17430249 complement(1442044..1442280) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1442280 17430249 P423_07125 Escherichia coli JJ1886 hypothetical protein YP_008721465.1 1442044 R 1355100 CDS YP_008721466.1 556554469 17430250 complement(1442472..1443188) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; repressor 1443188 17430250 P423_07130 Escherichia coli JJ1886 repressor YP_008721466.1 1442472 R 1355100 CDS YP_008721467.1 556551383 17430251 1443238..1443453 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1443453 17430251 P423_07135 Escherichia coli JJ1886 transcriptional regulator YP_008721467.1 1443238 D 1355100 CDS YP_008721468.1 556554470 17430252 1443450..1443875 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Rha family transcriptional regulator 1443875 17430252 P423_07140 Escherichia coli JJ1886 Rha family transcriptional regulator YP_008721468.1 1443450 D 1355100 CDS YP_008721469.1 556554471 17430253 1443973..1444860 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 1444860 17430253 P423_07145 Escherichia coli JJ1886 DNA-binding protein YP_008721469.1 1443973 D 1355100 CDS YP_008721470.1 556551384 17430254 1444867..1445613 1 NC_022648.1 acts to load the DnaB helicase onto the initiation site during DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication protein DnaC 1445613 17430254 P423_07150 Escherichia coli JJ1886 DNA replication protein DnaC YP_008721470.1 1444867 D 1355100 CDS YP_008721471.1 556554472 17430255 1445635..1446405 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1446405 17430255 P423_07155 Escherichia coli JJ1886 hypothetical protein YP_008721471.1 1445635 D 1355100 CDS YP_008721472.1 556554473 17430256 1446421..1446846 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1446846 17430256 P423_07160 Escherichia coli JJ1886 hypothetical protein YP_008721472.1 1446421 D 1355100 CDS YP_008721473.1 556554474 17430257 1447120..1447686 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1447686 17430257 P423_07165 Escherichia coli JJ1886 hypothetical protein YP_008721473.1 1447120 D 1355100 CDS YP_008721474.1 556551385 17430258 1447867..1448079 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 1448079 17430258 P423_07170 Escherichia coli JJ1886 regulatory protein YP_008721474.1 1447867 D 1355100 CDS YP_008721475.1 556554475 17430259 complement(1448121..1448300) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1448300 17430259 P423_07175 Escherichia coli JJ1886 hypothetical protein YP_008721475.1 1448121 R 1355100 CDS YP_008721476.1 556551386 17430260 1448521..1449576 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1449576 17430260 P423_07180 Escherichia coli JJ1886 hypothetical protein YP_008721476.1 1448521 D 1355100 CDS YP_008721477.1 556551387 17430261 1449577..1449957 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endodeoxyribonuclease 1449957 17430261 P423_07185 Escherichia coli JJ1886 endodeoxyribonuclease YP_008721477.1 1449577 D 1355100 CDS YP_008721478.1 556551388 17430262 1449954..1450775 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitermination protein 1450775 17430262 P423_07190 Escherichia coli JJ1886 antitermination protein YP_008721478.1 1449954 D 1355100 CDS YP_008721479.1 556551389 17430263 1451002..1451199 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1451199 17430263 P423_07195 Escherichia coli JJ1886 hypothetical protein YP_008721479.1 1451002 D 1355100 CDS YP_008721480.1 556551390 17430264 1451351..1452400 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA adenine methylase 1452400 17430264 P423_07200 Escherichia coli JJ1886 DNA adenine methylase YP_008721480.1 1451351 D 1355100 CDS YP_008721481.1 556551391 17430268 complement(1453614..1453949) 1 NC_022648.1 interacts RssB preventing the degradation of the stress sigma factor RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-adapter protein IraM 1453949 17430268 P423_07220 Escherichia coli JJ1886 anti-adapter protein IraM YP_008721481.1 1453614 R 1355100 CDS YP_008721482.1 556551392 17430269 1454210..1456063 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 9-O-acetyl-N-acetylneuraminic acid deacetylase 1456063 17430269 P423_07225 Escherichia coli JJ1886 9-O-acetyl-N-acetylneuraminic acid deacetylase YP_008721482.1 1454210 D 1355100 CDS YP_008721483.1 556551393 17430270 1456214..1456429 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 1456429 17430270 P423_07230 Escherichia coli JJ1886 holin YP_008721483.1 1456214 D 1355100 CDS YP_008721484.1 556551394 17430271 1456434..1456778 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1456778 17430271 P423_07235 Escherichia coli JJ1886 hypothetical protein YP_008721484.1 1456434 D 1355100 CDS YP_008721485.1 556551395 17430272 1457122..1457655 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 1457655 17430272 P423_07240 Escherichia coli JJ1886 lysozyme YP_008721485.1 1457122 D 1355100 CDS YP_008721486.1 556551396 17430273 1457948..1458079 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1458079 17430273 P423_07245 Escherichia coli JJ1886 membrane protein YP_008721486.1 1457948 D 1355100 CDS YP_008721487.1 556554476 17430274 1458082..1458198 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1458198 17430274 P423_07250 Escherichia coli JJ1886 membrane protein YP_008721487.1 1458082 D 1355100 CDS YP_008721488.1 556551397 17430275 1458214..1458792 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 1458792 17430275 P423_07255 Escherichia coli JJ1886 endopeptidase YP_008721488.1 1458214 D 1355100 CDS YP_008721489.1 556554477 17430276 1458789..1459004 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1459004 17430276 P423_07260 Escherichia coli JJ1886 hypothetical protein YP_008721489.1 1458789 D 1355100 CDS YP_008721490.1 556554478 17430277 complement(1459203..1459403) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1459403 17430277 P423_07265 Escherichia coli JJ1886 hypothetical protein YP_008721490.1 1459203 R 1355100 CDS YP_008721491.1 556551398 17430278 1459445..1459810 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNAse 1459810 17430278 P423_07270 Escherichia coli JJ1886 DNAse YP_008721491.1 1459445 D 1355100 CDS YP_008721492.1 556551399 17430279 1460101..1460664 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 1460664 17430279 P423_07275 Escherichia coli JJ1886 terminase YP_008721492.1 1460101 D 1355100 CDS YP_008721493.1 556551400 17430280 1460661..1462322 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 1462322 17430280 P423_07280 Escherichia coli JJ1886 terminase YP_008721493.1 1460661 D 1355100 CDS YP_008721494.1 556551401 17430281 1462386..1464323 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Capsid protein 1464323 17430281 P423_07285 Escherichia coli JJ1886 Capsid protein YP_008721494.1 1462386 D 1355100 CDS YP_008721495.1 556551402 17430282 1464535..1467120 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1467120 17430282 P423_07290 Escherichia coli JJ1886 hypothetical protein YP_008721495.1 1464535 D 1355100 CDS YP_008721496.1 556551403 17430283 1467117..1467443 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-packaging protein 1467443 17430283 P423_07295 Escherichia coli JJ1886 DNA-packaging protein YP_008721496.1 1467117 D 1355100 CDS YP_008721497.1 556551404 17430284 1467453..1467803 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head-tail adaptor protein 1467803 17430284 P423_07300 Escherichia coli JJ1886 head-tail adaptor protein YP_008721497.1 1467453 D 1355100 CDS YP_008721498.1 556551405 17430285 1467800..1468246 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1468246 17430285 P423_07305 Escherichia coli JJ1886 hypothetical protein YP_008721498.1 1467800 D 1355100 CDS YP_008721499.1 556551406 17430286 1468243..1468587 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1468587 17430286 P423_07310 Escherichia coli JJ1886 hypothetical protein YP_008721499.1 1468243 D 1355100 CDS YP_008721500.1 556551407 17430287 1468654..1469370 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1469370 17430287 P423_07315 Escherichia coli JJ1886 tail protein YP_008721500.1 1468654 D 1355100 CDS YP_008721501.1 556551408 17430288 1469385..1469759 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail assembly protein 1469759 17430288 P423_07320 Escherichia coli JJ1886 tail assembly protein YP_008721501.1 1469385 D 1355100 CDS YP_008721502.1 556551409 17430289 1469783..1470064 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage tail protein 1470064 17430289 P423_07325 Escherichia coli JJ1886 phage tail protein YP_008721502.1 1469783 D 1355100 CDS YP_008721503.1 556551410 17430290 1470112..1472142 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail length tape measure protein 1472142 17430290 P423_07330 Escherichia coli JJ1886 tail length tape measure protein YP_008721503.1 1470112 D 1355100 CDS YP_008721504.1 556554479 17430291 1472324..1473586 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 1473586 17430291 P423_07335 Escherichia coli JJ1886 transposase YP_008721504.1 1472324 D 1355100 CDS YP_008721505.1 556554480 17430292 1473567..1473689 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1473689 17430292 P423_07340 Escherichia coli JJ1886 hypothetical protein YP_008721505.1 1473567 D 1355100 CDS YP_008721506.1 556554481 17430293 1473842..1474717 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta-lactamase 1474717 17430293 P423_07345 Escherichia coli JJ1886 beta-lactamase YP_008721506.1 1473842 D 1355100 CDS YP_008721507.1 556554482 17430294 complement(1474764..1475036) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Tryptophan synthase subunit beta like protein 1475036 17430294 P423_07350 Escherichia coli JJ1886 Tryptophan synthase subunit beta like protein YP_008721507.1 1474764 R 1355100 CDS YP_008721508.1 556554483 17430295 1475356..1476600 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 1476600 17430295 P423_07355 Escherichia coli JJ1886 tail protein YP_008721508.1 1475356 D 1355100 CDS YP_008721509.1 556551411 17430296 1476593..1476934 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1476934 17430296 P423_07360 Escherichia coli JJ1886 tail protein YP_008721509.1 1476593 D 1355100 CDS YP_008721510.1 556554484 17430298 1478521..1479102 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail assembly protein 1479102 17430298 P423_07370 Escherichia coli JJ1886 tail assembly protein YP_008721510.1 1478521 D 1355100 CDS YP_008721511.1 556551412 17430299 1479445..1482918 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host specificity protein J 1482918 17430299 P423_07375 Escherichia coli JJ1886 host specificity protein J YP_008721511.1 1479445 D 1355100 CDS YP_008721512.1 556551413 17430300 1482986..1483444 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1483444 17430300 P423_07380 Escherichia coli JJ1886 hypothetical protein YP_008721512.1 1482986 D 1355100 CDS YP_008721513.1 556554485 17430301 1483784..1485100 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1485100 17430301 P423_07385 Escherichia coli JJ1886 hypothetical protein YP_008721513.1 1483784 D 1355100 CDS YP_008721514.1 556554486 17430302 1485115..1485861 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATP-binding protein 1485861 17430302 P423_07390 Escherichia coli JJ1886 ATP-binding protein YP_008721514.1 1485115 D 1355100 CDS YP_008721515.1 556554487 17430303 1485912..1486178 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1486178 17430303 P423_07395 Escherichia coli JJ1886 hypothetical protein YP_008721515.1 1485912 D 1355100 CDS YP_008721516.1 556551414 17430304 1486330..1489155 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 1489155 17430304 P423_07400 Escherichia coli JJ1886 tail protein YP_008721516.1 1486330 D 1355100 CDS YP_008721517.1 556551415 17430305 1489157..1489690 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber assembly protein 1489690 17430305 P423_07405 Escherichia coli JJ1886 tail fiber assembly protein YP_008721517.1 1489157 D 1355100 CDS YP_008721518.1 556551416 17430306 complement(1489721..1490248) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail fiber assembly protein 1490248 17430306 P423_07410 Escherichia coli JJ1886 tail fiber assembly protein YP_008721518.1 1489721 R 1355100 CDS YP_008721519.1 556554488 17430307 complement(1490264..1491232) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail fiber protein 1491232 17430307 P423_07415 Escherichia coli JJ1886 tail fiber protein YP_008721519.1 1490264 R 1355100 CDS YP_008721520.1 556554489 17430308 complement(1491739..1492395) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1492395 17430308 P423_07420 Escherichia coli JJ1886 hypothetical protein YP_008721520.1 1491739 R 1355100 CDS YP_008721521.1 556554490 17430309 1492464..1492733 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail fiber assembly protein 1492733 17430309 P423_07425 Escherichia coli JJ1886 tail fiber assembly protein YP_008721521.1 1492464 D 1355100 CDS YP_008721522.1 556554491 17430311 complement(1493145..1493702) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Rha family transcriptional regulator 1493702 17430311 P423_07435 Escherichia coli JJ1886 Rha family transcriptional regulator YP_008721522.1 1493145 R 1355100 CDS YP_008721523.1 556554492 17430312 1494177..1494299 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1494299 17430312 P423_07440 Escherichia coli JJ1886 membrane protein YP_008721523.1 1494177 D 1355100 CDS YP_008721524.1 556551417 17430313 complement(1494350..1495156) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan synthase subunit alpha 1495156 17430313 P423_07445 Escherichia coli JJ1886 tryptophan synthase subunit alpha YP_008721524.1 1494350 R 1355100 CDS YP_008721525.1 556551418 17430314 complement(1495156..1496349) 1 NC_022648.1 catalyzes the formation of L-tryptophan from L-serine and 1-(indol-3-yl)glycerol 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan synthase subunit beta 1496349 17430314 P423_07450 Escherichia coli JJ1886 tryptophan synthase subunit beta YP_008721525.1 1495156 R 1355100 CDS YP_008721526.1 556551419 17430315 complement(1496361..1497719) 1 NC_022648.1 monomeric bifunctional protein; functions in tryptophan biosynthesis pathway; phosphoribosylanthranilate is rearranged to carboxyphenylaminodeoxyribulosephosphate which is then closed to form indole-3-glycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylanthranilate isomerase 1497719 17430315 P423_07455 Escherichia coli JJ1886 phosphoribosylanthranilate isomerase YP_008721526.1 1496361 R 1355100 CDS YP_008721527.1 556551420 17430316 complement(1497723..1499318) 1 NC_022648.1 bifunctional anthranilate synthase II/anthranilate phosphoribosyltransferase; TrpD; forms a heterotetramer with Trp E and the complex catalyzes the formation of anthranilate from chorismate and glutamine; also catalyzes the formation of N-(5-phospho-D-ribosyl)-anthranilate from athranilate and 5-phospho-alpha-D-ribose 1-diphosphate; functions in tryptophan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; anthranilate phosphoribosyltransferase 1499318 17430316 P423_07460 Escherichia coli JJ1886 anthranilate phosphoribosyltransferase YP_008721527.1 1497723 R 1355100 CDS YP_008721528.1 556551421 17430317 complement(1499318..1500880) 1 NC_022648.1 with component II, the glutamine amidotransferase, catalyzes the formation of anthranilate from chorismate and glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; anthranilate synthase subunit I 1500880 17430317 P423_07465 Escherichia coli JJ1886 anthranilate synthase subunit I YP_008721528.1 1499318 R 1355100 CDS YP_008721529.1 556551422 17430318 1501154..1502035 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine tRNA ribosyltransferase 1502035 17430318 P423_07470 Escherichia coli JJ1886 S-adenosylmethionine tRNA ribosyltransferase YP_008721529.1 1501154 D 1355100 CDS YP_008721530.1 556551423 17430319 1502032..1502652 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1502652 17430319 P423_07475 Escherichia coli JJ1886 hypothetical protein YP_008721530.1 1502032 D 1355100 CDS YP_008721531.1 556551424 17430320 1502680..1504575 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1504575 17430320 P423_07480 Escherichia coli JJ1886 hypothetical protein YP_008721531.1 1502680 D 1355100 CDS YP_008721532.1 556551425 17430321 1504788..1505663 1 NC_022648.1 catalyzes the synthesis of pseudouridine from uracil-2605 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridylate synthase B 1505663 17430321 P423_07485 Escherichia coli JJ1886 23S rRNA pseudouridylate synthase B YP_008721532.1 1504788 D 1355100 CDS YP_008721533.1 556554493 17430322 1505833..1506855 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1506855 17430322 P423_07490 Escherichia coli JJ1886 membrane protein YP_008721533.1 1505833 D 1355100 CDS YP_008721534.1 556554494 17430323 1506865..1507173 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1507173 17430323 P423_07495 Escherichia coli JJ1886 hypothetical protein YP_008721534.1 1506865 D 1355100 CDS YP_008721535.1 556551426 17430324 complement(1507230..1507820) 1 NC_022648.1 catalyzes the formation of adenosylcobalamide from cobinamide and the formation of coenzyme B12 from cob(I)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.; cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase 1507820 17430324 P423_07500 Escherichia coli JJ1886 cob(I)alamin adenolsyltransferase/cobinamide ATP-dependent adenolsyltransferase YP_008721535.1 1507230 R 1355100 CDS YP_008721536.1 556551427 17430325 complement(1507817..1508575) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxoacyl-ACP reductase 1508575 17430325 P423_07505 Escherichia coli JJ1886 oxoacyl-ACP reductase YP_008721536.1 1507817 R 1355100 CDS YP_008721537.1 556551428 17430326 1508795..1509844 1 NC_022648.1 multicopy suppressor of htrA(degP); Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 1509844 17430326 P423_07510 Escherichia coli JJ1886 peptidase YP_008721537.1 1508795 D 1355100 CDS YP_008721538.1 556551429 17430327 complement(1509880..1510131) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1510131 17430327 P423_07515 Escherichia coli JJ1886 hypothetical protein YP_008721538.1 1509880 R 1355100 CDS YP_008721539.1 556551430 17430328 1510511..1513108 1 NC_022648.1 catalyzes the ATP-dependent breakage of single-stranded DNA followed by passage and rejoining, maintains net negative superhelicity; Derived by automated computational analysis using gene prediction method: Protein Homology.; topoisomerase I 1513108 17430328 P423_07520 Escherichia coli JJ1886 topoisomerase I YP_008721539.1 1510511 D 1355100 CDS YP_008721540.1 556551431 17430329 1513318..1514292 1 NC_022648.1 LysR-type transcriptional regulator; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates cysteine biosynthesis by controlling expression of the cys regulon; autoregulates expression; crystal structure of Klebsiella aerogenes showed tetramer formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; CysB family transcriptional regulator 1514292 cysB 17430329 cysB Escherichia coli JJ1886 CysB family transcriptional regulator YP_008721540.1 1513318 D 1355100 CDS YP_008721541.1 556551432 17430330 1514623..1514751 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1514751 17430330 P423_07530 Escherichia coli JJ1886 hypothetical protein YP_008721541.1 1514623 D 1355100 CDS YP_008721542.1 556551433 17430331 1514754..1514921 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1514921 17430331 P423_07535 Escherichia coli JJ1886 hypothetical protein YP_008721542.1 1514754 D 1355100 CDS YP_008721543.1 556554495 17430332 complement(1514995..1515120) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1515120 17430332 P423_07540 Escherichia coli JJ1886 hypothetical protein YP_008721543.1 1514995 R 1355100 CDS YP_008721544.1 556551434 17430333 1515280..1517955 1 NC_022648.1 Catalyzes the conversion of citrate to isocitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; aconitate hydratase 1517955 17430333 P423_07545 Escherichia coli JJ1886 aconitate hydratase YP_008721544.1 1515280 D 1355100 CDS YP_008721545.1 556551435 17430334 complement(1518019..1518609) 1 NC_022648.1 catalyzes the conversion of GTP to formate and 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)pyrimidine and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP cyclohydrolase II 1518609 ribA 17430334 ribA Escherichia coli JJ1886 GTP cyclohydrolase II YP_008721545.1 1518019 R 1355100 CDS YP_008721546.1 556551436 17430335 1518779..1519543 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylglycerophosphatase B 1519543 17430335 P423_07555 Escherichia coli JJ1886 phosphatidylglycerophosphatase B YP_008721546.1 1518779 D 1355100 CDS YP_008721547.1 556551437 17430336 1519692..1520000 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1520000 17430336 P423_07560 Escherichia coli JJ1886 membrane protein YP_008721547.1 1519692 D 1355100 CDS YP_008721548.1 556551438 17430337 1520007..1521176 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1521176 17430337 P423_07565 Escherichia coli JJ1886 hypothetical protein YP_008721548.1 1520007 D 1355100 CDS YP_008721549.1 556551439 17430338 1521308..1522105 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; orotidine 5'-phosphate decarboxylase 1522105 17430338 P423_07570 Escherichia coli JJ1886 orotidine 5'-phosphate decarboxylase YP_008721549.1 1521308 D 1355100 CDS YP_008721550.1 556551440 17430339 1522105..1522431 1 NC_022648.1 involved in start site selection during the initiation of translation; Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor Sui1 1522431 17430339 P423_07575 Escherichia coli JJ1886 translation initiation factor Sui1 YP_008721550.1 1522105 D 1355100 CDS YP_008721551.1 556551441 17430340 complement(1522557..1522775) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1522775 17430340 P423_07580 Escherichia coli JJ1886 lipoprotein YP_008721551.1 1522557 R 1355100 CDS YP_008721552.1 556551442 17430341 complement(1523044..1523793) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 1523793 17430341 P423_07585 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008721552.1 1523044 R 1355100 CDS YP_008721553.1 556551443 17430342 complement(1523882..1524055) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1524055 17430342 P423_07590 Escherichia coli JJ1886 hypothetical protein YP_008721553.1 1523882 R 1355100 CDS YP_008721554.1 556551444 17430343 complement(1524203..1526188) 1 NC_022648.1 c-di-GMP phosphodiesterase; probably degrades signalling molecule c-di-GMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNase II stability modulator 1526188 17430343 P423_07595 Escherichia coli JJ1886 RNase II stability modulator YP_008721554.1 1524203 R 1355100 CDS YP_008721555.1 556551445 17430344 complement(1526422..1528356) 1 NC_022648.1 Involved in mRNA degradation. Hydrolyzes single-stranded polyribonucleotides processively in the 3' to 5' direction; Derived by automated computational analysis using gene prediction method: Protein Homology.; exoribonuclease II 1528356 17430344 P423_07600 Escherichia coli JJ1886 exoribonuclease II YP_008721555.1 1526422 R 1355100 CDS YP_008721556.1 556551446 17430345 complement(1528424..1529551) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1529551 17430345 P423_07605 Escherichia coli JJ1886 hypothetical protein YP_008721556.1 1528424 R 1355100 CDS YP_008721557.1 556551447 17430346 complement(1529696..1530484) 1 NC_022648.1 Catalyzes a key regulatory step in fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; enoyl-ACP reductase 1530484 17430346 P423_07610 Escherichia coli JJ1886 enoyl-ACP reductase YP_008721557.1 1529696 R 1355100 CDS YP_008721558.1 556551448 17430347 1530962..1531528 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 1531528 17430347 P423_07615 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008721558.1 1530962 D 1355100 CDS YP_008721559.1 556551449 17430348 1531677..1532798 1 NC_022648.1 with AcrD and TolC forms a transport system involved in resistance to a number of compounds including lipophilic antibiotics; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1532798 17430348 P423_07620 Escherichia coli JJ1886 multidrug transporter YP_008721559.1 1531677 D 1355100 CDS YP_008721560.1 556551450 17430349 1532798..1535905 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1535905 17430349 P423_07625 Escherichia coli JJ1886 multidrug transporter YP_008721560.1 1532798 D 1355100 CDS YP_008721561.1 556551451 17430350 1535909..1537282 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1537282 17430350 P423_07630 Escherichia coli JJ1886 multidrug transporter YP_008721561.1 1535909 D 1355100 CDS YP_008721562.1 556551452 17430351 1537291..1538454 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major facilitator transporter 1538454 17430351 P423_07635 Escherichia coli JJ1886 major facilitator transporter YP_008721562.1 1537291 D 1355100 CDS YP_008721563.1 556551453 17430352 complement(1538502..1539308) 1 NC_022648.1 Part of the ABC transporter complex DppABCDF involved in the transport of dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1539308 dppF 17430352 dppF Escherichia coli JJ1886 peptide ABC transporter ATP-binding protein YP_008721563.1 1538502 R 1355100 CDS YP_008721564.1 556551454 17430353 complement(1539310..1540302) 1 NC_022648.1 DppD and DppF are the ATP-binding components of the ABC dipeptide transport system DppABCDF; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 1540302 dppD 17430353 dppD Escherichia coli JJ1886 peptide ABC transporter ATP-binding protein YP_008721564.1 1539310 R 1355100 CDS YP_008721565.1 556551455 17430354 complement(1540302..1541192) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1541192 17430354 P423_07650 Escherichia coli JJ1886 peptide ABC transporter permease YP_008721565.1 1540302 R 1355100 CDS YP_008721566.1 556551456 17430355 complement(1541179..1542144) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1542144 17430355 P423_07655 Escherichia coli JJ1886 peptide ABC transporter permease YP_008721566.1 1541179 R 1355100 CDS YP_008721567.1 556551457 17430356 complement(1542141..1543784) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1543784 17430356 P423_07660 Escherichia coli JJ1886 peptide ABC transporter permease YP_008721567.1 1542141 R 1355100 CDS YP_008721568.1 556551458 17430357 complement(1544097..1544342) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1544342 17430357 P423_07665 Escherichia coli JJ1886 hypothetical protein YP_008721568.1 1544097 R 1355100 CDS YP_008721569.1 556551459 17430358 complement(1544767..1545759) 1 NC_022648.1 transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1545759 pspF 17430358 pspF Escherichia coli JJ1886 transcriptional regulator YP_008721569.1 1544767 R 1355100 CDS YP_008721570.1 556551460 17430359 1545911..1546579 1 NC_022648.1 involved in maintaining membrane potential under membrane stress conditions; also acts as a negative transcriptional regulator of the phage shock protein (psp) operon(pspABCDE) by regulating the transcriptional activator PspF; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 1546579 17430359 P423_07675 Escherichia coli JJ1886 phage-shock protein YP_008721570.1 1545911 D 1355100 CDS YP_008721571.1 556551461 17430360 1546633..1546857 1 NC_022648.1 DNA-binding transcriptional regulator; acts together with PspC to induce psp operon during infection with phage, exposure to ethanol or osmotic shock; forms a complex with PspA and C; PspC is required for PspAB binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 1546857 pspB 17430360 pspB Escherichia coli JJ1886 phage-shock protein YP_008721571.1 1546633 D 1355100 CDS YP_008721572.1 556551462 17430361 1546857..1547216 1 NC_022648.1 with PsbB forms toxin/antitoxin pair; activates the psp operon in response to phage infection, exposure to ethanol or osmotic shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1547216 17430361 P423_07685 Escherichia coli JJ1886 transcriptional regulator YP_008721572.1 1546857 D 1355100 CDS YP_008721573.1 556551463 17430362 1547225..1547446 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 1547446 17430362 P423_07690 Escherichia coli JJ1886 phage-shock protein YP_008721573.1 1547225 D 1355100 CDS YP_008721574.1 556551464 17430363 1547521..1547835 1 NC_022648.1 rhodanese; catalyzes the formation of thiocyanate from thiosulfate and hydrogen cyanide; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate:cyanide sulfurtransferase 1547835 17430363 P423_07695 Escherichia coli JJ1886 thiosulfate:cyanide sulfurtransferase YP_008721574.1 1547521 D 1355100 CDS YP_008721575.1 556554496 17430364 1548046..1549725 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sucrose phosphorylase 1549725 17430364 P423_07700 Escherichia coli JJ1886 sucrose phosphorylase YP_008721575.1 1548046 D 1355100 CDS YP_008721576.1 556554497 17430365 1549739..1551031 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter substrate-binding protein 1551031 17430365 P423_07705 Escherichia coli JJ1886 sugar ABC transporter substrate-binding protein YP_008721576.1 1549739 D 1355100 CDS YP_008721577.1 556554498 17430366 1551052..1551933 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter permease 1551933 17430366 P423_07710 Escherichia coli JJ1886 sugar ABC transporter permease YP_008721577.1 1551052 D 1355100 CDS YP_008721578.1 556554499 17430367 1551920..1552762 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter permease 1552762 17430367 P423_07715 Escherichia coli JJ1886 sugar ABC transporter permease YP_008721578.1 1551920 D 1355100 CDS YP_008721579.1 556554500 17430368 1552793..1553845 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; alcohol dehydrogenase 1553845 17430368 P423_07720 Escherichia coli JJ1886 alcohol dehydrogenase YP_008721579.1 1552793 D 1355100 CDS YP_008721580.1 556554501 17430369 1553863..1554651 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1554651 17430369 P423_07725 Escherichia coli JJ1886 hypothetical protein YP_008721580.1 1553863 D 1355100 CDS YP_008721581.1 556554502 17430370 1554673..1555716 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; oxidoreductase 1555716 17430370 P423_07730 Escherichia coli JJ1886 oxidoreductase YP_008721581.1 1554673 D 1355100 CDS YP_008721582.1 556554503 17430371 1555713..1557980 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl hydrolase family 65 1557980 17430371 P423_07735 Escherichia coli JJ1886 glycosyl hydrolase family 65 YP_008721582.1 1555713 D 1355100 CDS YP_008721583.1 556554504 17430372 1557977..1558636 1 NC_022648.1 catalyzes the interconversion of beta-D-glucose 6-phosphate to beta-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta-phosphoglucomutase 1558636 17430372 P423_07740 Escherichia coli JJ1886 beta-phosphoglucomutase YP_008721583.1 1557977 D 1355100 CDS YP_008721584.1 556551465 17430373 1558650..1559732 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 1559732 17430373 P423_07745 Escherichia coli JJ1886 sugar ABC transporter ATP-binding protein YP_008721584.1 1558650 D 1355100 CDS YP_008721585.1 556551466 17430374 1559777..1560682 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1560682 17430374 P423_07750 Escherichia coli JJ1886 membrane protein YP_008721585.1 1559777 D 1355100 CDS YP_008721586.1 556551467 17430375 complement(1560733..1561731) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 1561731 17430375 P423_07755 Escherichia coli JJ1886 LacI family transcriptional regulator YP_008721586.1 1560733 R 1355100 CDS YP_008721587.1 556551468 17430376 1561887..1563284 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1563284 17430376 P423_07760 Escherichia coli JJ1886 hypothetical protein YP_008721587.1 1561887 D 1355100 CDS YP_008721588.1 556551469 17430377 1563281..1564342 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1564342 17430377 P423_07765 Escherichia coli JJ1886 membrane protein YP_008721588.1 1563281 D 1355100 CDS YP_008721589.1 556551470 17430378 1564490..1566031 1 NC_022648.1 regulates genes involved in the biosynthesis and transport of aromatic amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1566031 17430378 P423_07770 Escherichia coli JJ1886 transcriptional regulator YP_008721589.1 1564490 D 1355100 CDS YP_008721590.1 556551471 17430379 complement(1566075..1566581) 1 NC_022648.1 antioxidant activity; thioredoxin-dependent thiol peroxidase; forms homodimers in solution; shows substrate specificity to alkyl hydroperoxides; periplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid hydroperoxide peroxidase 1566581 tpx 17430379 tpx Escherichia coli JJ1886 lipid hydroperoxide peroxidase YP_008721590.1 1566075 R 1355100 CDS YP_008721591.1 556551472 17430380 1566700..1567665 1 NC_022648.1 catalyzes the epimerization of L-alanyl-D-glutamate to L-alanyl-L-glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-Ala-D/L-Glu epimerase 1567665 17430380 P423_07780 Escherichia coli JJ1886 L-Ala-D/L-Glu epimerase YP_008721591.1 1566700 D 1355100 CDS YP_008721592.1 556551473 17430381 complement(1567640..1568368) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; murein peptide amidase A 1568368 17430381 P423_07785 Escherichia coli JJ1886 murein peptide amidase A YP_008721592.1 1567640 R 1355100 CDS YP_008721593.1 556551474 17430382 complement(1568659..1569297) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent dehydratase 1569297 17430382 P423_07790 Escherichia coli JJ1886 NAD-dependent dehydratase YP_008721593.1 1568659 R 1355100 CDS YP_008721594.1 556551475 17430383 complement(1569368..1570300) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1570300 17430383 P423_07795 Escherichia coli JJ1886 hypothetical protein YP_008721594.1 1569368 R 1355100 CDS YP_008721595.1 556551476 17430384 1570426..1571325 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 1571325 17430384 P423_07800 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008721595.1 1570426 D 1355100 CDS YP_008721596.1 556551477 17430385 1571662..1573275 1 NC_022648.1 is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 1573275 17430385 P423_07805 Escherichia coli JJ1886 peptide ABC transporter substrate-binding protein YP_008721596.1 1571662 D 1355100 CDS YP_008721597.1 556551478 17430386 complement(1573326..1574357) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MscS family inner membrane protein YnaI 1574357 17430386 P423_07810 Escherichia coli JJ1886 MscS family inner membrane protein YnaI YP_008721597.1 1573326 R 1355100 CDS YP_008721598.1 556551479 17430387 1574601..1574858 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1574858 17430387 P423_07815 Escherichia coli JJ1886 hypothetical protein YP_008721598.1 1574601 D 1355100 CDS YP_008721599.1 556551480 17430388 complement(1574908..1575858) 1 NC_022648.1 with UspC and UspD is involved in resistance to UV irradiation; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein E 1575858 17430388 P423_07820 Escherichia coli JJ1886 universal stress protein E YP_008721599.1 1574908 R 1355100 CDS YP_008721600.1 556551481 17430389 complement(1576010..1576762) 1 NC_022648.1 Global transcription factor that controls the expression of over 100 target genes in response to anoxia; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate/nitrate reduction transcriptional regulator 1576762 17430389 P423_07825 Escherichia coli JJ1886 fumarate/nitrate reduction transcriptional regulator YP_008721600.1 1576010 R 1355100 CDS YP_008721601.1 556551482 17430390 complement(1576957..1577472) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; O-6-alkylguanine-DNA:cysteine-protein methyltransferase 1577472 17430390 P423_07830 Escherichia coli JJ1886 O-6-alkylguanine-DNA:cysteine-protein methyltransferase YP_008721601.1 1576957 R 1355100 CDS YP_008721602.1 556554505 17430391 complement(1578015..1578830) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; AraC family transcriptional regulator 1578830 17430391 P423_07835 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008721602.1 1578015 R 1355100 CDS YP_008721603.1 556554506 17430392 1578927..1579955 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hemolysin D 1579955 17430392 P423_07840 Escherichia coli JJ1886 hemolysin D YP_008721603.1 1578927 D 1355100 CDS YP_008721604.1 556554507 17430393 1579952..1581466 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MFS transporter 1581466 17430393 P423_07845 Escherichia coli JJ1886 MFS transporter YP_008721604.1 1579952 D 1355100 CDS YP_008721605.1 556551483 17430394 1581661..1582224 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA endonuclease SmrA 1582224 17430394 P423_07850 Escherichia coli JJ1886 DNA endonuclease SmrA YP_008721605.1 1581661 D 1355100 CDS YP_008721606.1 556554508 17430395 complement(1582245..1583477) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; diguanylate cyclase 1583477 17430395 P423_07855 Escherichia coli JJ1886 diguanylate cyclase YP_008721606.1 1582245 R 1355100 CDS YP_008721607.1 556551484 17430396 1583732..1584715 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter 1584715 zntB 17430396 zntB Escherichia coli JJ1886 zinc transporter YP_008721607.1 1583732 D 1355100 CDS YP_008721608.1 556551485 17430397 1585193..1586566 1 NC_022648.1 exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 1586566 17430397 P423_07865 Escherichia coli JJ1886 RNA helicase YP_008721608.1 1585193 D 1355100 CDS YP_008721609.1 556554509 17430398 complement(1586694..1587629) 1 NC_022648.1 TtcA; YdaO; catalyzes the thiolation of cytosine 32 in specific tRNAs; forms 2-thiocytidine (s(2)C); Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tRNA 2-thiocytidine biosynthesis protein TtcA 1587629 17430398 P423_07870 Escherichia coli JJ1886 tRNA 2-thiocytidine biosynthesis protein TtcA YP_008721609.1 1586694 R 1355100 CDS YP_008721610.1 556554510 17430399 complement(1587681..1587782) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1587782 17430399 P423_07875 Escherichia coli JJ1886 hypothetical protein YP_008721610.1 1587681 R 1355100 CDS YP_008721611.1 556554511 17430400 complement(1589498..1589767) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1589767 17430400 P423_07880 Escherichia coli JJ1886 hypothetical protein YP_008721611.1 1589498 R 1355100 CDS YP_008721612.1 556551486 17430401 complement(1589955..1590389) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein F 1590389 17430401 P423_07885 Escherichia coli JJ1886 universal stress protein F YP_008721612.1 1589955 R 1355100 CDS YP_008721613.1 556551487 17430402 complement(1590530..1591663) 1 NC_022648.1 allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin protein C 1591663 17430402 P423_07890 Escherichia coli JJ1886 outer membrane porin protein C YP_008721613.1 1590530 R 1355100 CDS YP_008721614.1 556554512 17430403 complement(1591855..1592028) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1592028 17430403 P423_07895 Escherichia coli JJ1886 hypothetical protein YP_008721614.1 1591855 R 1355100 CDS YP_008721615.1 556551488 17430404 complement(1592029..1595553) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate-flavodoxin oxidoreductase 1595553 17430404 P423_07900 Escherichia coli JJ1886 pyruvate-flavodoxin oxidoreductase YP_008721615.1 1592029 R 1355100 CDS YP_008721616.1 556551489 17430405 1595827..1596093 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1596093 17430405 P423_07905 Escherichia coli JJ1886 hypothetical protein YP_008721616.1 1595827 D 1355100 CDS YP_008721617.1 556551490 17430406 complement(1596090..1596512) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heat-inducible protein 1596512 17430406 P423_07910 Escherichia coli JJ1886 heat-inducible protein YP_008721617.1 1596090 R 1355100 CDS YP_008721618.1 556551491 17430407 complement(1596623..1597612) 1 NC_022648.1 fermentative; catalyzes the formationof pyruvate from lactate; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-lactate dehydrogenase 1597612 17430407 P423_07915 Escherichia coli JJ1886 D-lactate dehydrogenase YP_008721618.1 1596623 R 1355100 CDS YP_008721619.1 556551492 17430408 1597820..1600459 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1600459 17430408 P423_07920 Escherichia coli JJ1886 hypothetical protein YP_008721619.1 1597820 D 1355100 CDS YP_008721620.1 556551493 17430409 1600456..1600641 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1600641 17430409 P423_07925 Escherichia coli JJ1886 hypothetical protein YP_008721620.1 1600456 D 1355100 CDS YP_008721621.1 556551494 17430410 1600649..1600975 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1600975 17430410 P423_07930 Escherichia coli JJ1886 hypothetical protein YP_008721621.1 1600649 D 1355100 CDS YP_008721622.1 556554513 17430412 1602071..1610569 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1610569 17430412 P423_07940 Escherichia coli JJ1886 hypothetical protein YP_008721622.1 1602071 D 1355100 CDS YP_008721623.1 556551495 17430413 1610789..1611655 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1611655 17430413 P423_07945 Escherichia coli JJ1886 oxidoreductase YP_008721623.1 1610789 D 1355100 CDS YP_008721624.1 556551496 17430414 complement(1611695..1612300) 1 NC_022648.1 FMN-dependent; requires NADH; catalyzes the cleavage of azo bond in aromatic azo compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.; azoreductase 1612300 17430414 P423_07950 Escherichia coli JJ1886 azoreductase YP_008721624.1 1611695 R 1355100 CDS YP_008721625.1 556551497 17430415 1612501..1616403 1 NC_022648.1 involved in the post-transcriptional processing of the daa operon mRNA, which encodes proteins involved in fimbrial biogenesis of an enteropathogenic E. coli strain; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 1616403 17430415 P423_07955 Escherichia coli JJ1886 RNA helicase YP_008721625.1 1612501 D 1355100 CDS YP_008721626.1 556551498 17430416 1616676..1617476 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1617476 17430416 P423_07960 Escherichia coli JJ1886 hypothetical protein YP_008721626.1 1616676 D 1355100 CDS YP_008721627.1 556551499 17430417 1617686..1619125 1 NC_022648.1 NAD-linked; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 1619125 17430417 P423_07965 Escherichia coli JJ1886 aldehyde dehydrogenase YP_008721627.1 1617686 D 1355100 CDS YP_008721628.1 556551500 17430418 complement(1619167..1620168) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glyceraldehyde-3-phosphate dehydrogenase 1620168 17430418 P423_07970 Escherichia coli JJ1886 glyceraldehyde-3-phosphate dehydrogenase YP_008721628.1 1619167 R 1355100 CDS YP_008721629.1 556551501 17430419 1620357..1620887 1 NC_022648.1 B-type di-heme cytochrome with a major alpha-absorption peak at 561 nm and a minor peak at 555 nm; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome B561 1620887 17430419 P423_07980 Escherichia coli JJ1886 cytochrome B561 YP_008721629.1 1620357 D 1355100 CDS YP_008721630.1 556551502 17430420 1621132..1621305 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1621305 17430420 P423_07985 Escherichia coli JJ1886 hypothetical protein YP_008721630.1 1621132 D 1355100 CDS YP_008721631.1 556551503 17430421 complement(1621377..1621526) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein hokC 1621526 17430421 P423_07990 Escherichia coli JJ1886 protein hokC YP_008721631.1 1621377 R 1355100 CDS YP_008721632.1 556554514 17430422 1621939..1622232 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; methyl-accepting chemotaxis protein 1622232 17430422 P423_07995 Escherichia coli JJ1886 methyl-accepting chemotaxis protein YP_008721632.1 1621939 D 1355100 CDS YP_008721633.1 556551504 17430423 complement(1622270..1623193) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1623193 17430423 P423_08000 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008721633.1 1622270 R 1355100 CDS YP_008721634.1 556551505 17430424 1623410..1624753 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1624753 17430424 P423_08005 Escherichia coli JJ1886 hypothetical protein YP_008721634.1 1623410 D 1355100 CDS YP_008721635.1 556551506 17430425 1624978..1626633 1 NC_022648.1 involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucan biosynthesis protein D 1626633 mdoD 17430425 mdoD Escherichia coli JJ1886 glucan biosynthesis protein D YP_008721635.1 1624978 D 1355100 CDS YP_008721636.1 556551507 17430426 1626773..1626997 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1626997 17430426 P423_08015 Escherichia coli JJ1886 hypothetical protein YP_008721636.1 1626773 D 1355100 CDS YP_008721637.1 556551508 17430427 1627060..1627599 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal-protein-L7/L12-serine acetyltransferase 1627599 17430427 P423_08020 Escherichia coli JJ1886 ribosomal-protein-L7/L12-serine acetyltransferase YP_008721637.1 1627060 D 1355100 CDS YP_008721638.1 556551509 17430428 complement(1627591..1628571) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 1628571 17430428 P423_08025 Escherichia coli JJ1886 acetyltransferase YP_008721638.1 1627591 R 1355100 CDS YP_008721639.1 556551510 17430429 1628695..1629687 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tellurite resistance protein TehA 1629687 17430429 P423_08030 Escherichia coli JJ1886 tellurite resistance protein TehA YP_008721639.1 1628695 D 1355100 CDS YP_008721640.1 556551511 17430430 1629684..1630277 1 NC_022648.1 with TehA confers resistance to tellurite; Derived by automated computational analysis using gene prediction method: Protein Homology.; tellurite resistance protein TehB 1630277 17430430 P423_08035 Escherichia coli JJ1886 tellurite resistance protein TehB YP_008721640.1 1629684 D 1355100 CDS YP_008721641.1 556551512 17430431 1630580..1631248 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1631248 17430431 P423_08040 Escherichia coli JJ1886 hypothetical protein YP_008721641.1 1630580 D 1355100 CDS YP_008721642.1 556551513 17430432 complement(1631283..1632455) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1632455 17430432 P423_08045 Escherichia coli JJ1886 membrane protein YP_008721642.1 1631283 R 1355100 CDS YP_008721643.1 556551514 17430433 1632547..1633083 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 1633083 17430433 P423_08050 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008721643.1 1632547 D 1355100 CDS YP_008721644.1 556551515 17430434 1633156..1635117 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 1635117 17430434 P423_08055 Escherichia coli JJ1886 protease YP_008721644.1 1633156 D 1355100 CDS YP_008721645.1 556551516 17430435 complement(1635209..1635439) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1635439 17430435 P423_08060 Escherichia coli JJ1886 hypothetical protein YP_008721645.1 1635209 R 1355100 CDS YP_008721646.1 556551517 17430436 1635651..1635854 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 1635854 17430436 P423_08065 Escherichia coli JJ1886 antitoxin YP_008721646.1 1635651 D 1355100 CDS YP_008721647.1 556551518 17430437 1635933..1637339 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 1637339 17430437 P423_08070 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008721647.1 1635933 D 1355100 CDS YP_008721648.1 556551519 17430438 1637584..1638729 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine/putrescine ABC transporter substrate-binding protein 1638729 17430438 P423_08075 Escherichia coli JJ1886 spermidine/putrescine ABC transporter substrate-binding protein YP_008721648.1 1637584 D 1355100 CDS YP_008721649.1 556551520 17430439 1638747..1639760 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; polyamine ABC transporter ATP-binding protein 1639760 17430439 P423_08080 Escherichia coli JJ1886 polyamine ABC transporter ATP-binding protein YP_008721649.1 1638747 D 1355100 CDS YP_008721650.1 556551521 17430440 1639761..1640702 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine/putrescine ABC transporter permease 1640702 17430440 P423_08085 Escherichia coli JJ1886 spermidine/putrescine ABC transporter permease YP_008721650.1 1639761 D 1355100 CDS YP_008721651.1 556551522 17430441 1640692..1641486 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine/putrescine ABC transporter permease 1641486 17430441 P423_08090 Escherichia coli JJ1886 spermidine/putrescine ABC transporter permease YP_008721651.1 1640692 D 1355100 CDS YP_008721652.1 556551523 17430442 1641508..1642932 1 NC_022648.1 catalyzes the formation of 4-aminobutanoate from 4-aminobutanal; involved in putrescine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-aminobutyraldehyde dehydrogenase 1642932 17430442 P423_08095 Escherichia coli JJ1886 gamma-aminobutyraldehyde dehydrogenase YP_008721652.1 1641508 D 1355100 CDS YP_008721653.1 556551524 17430443 1643272..1643493 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1643493 17430443 P423_08100 Escherichia coli JJ1886 hypothetical protein YP_008721653.1 1643272 D 1355100 CDS YP_008721654.1 556551525 17430444 1643579..1643812 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1643812 17430444 P423_08105 Escherichia coli JJ1886 hypothetical protein YP_008721654.1 1643579 D 1355100 CDS YP_008721655.1 556551526 17430445 complement(1643813..1644262) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1644262 17430445 P423_08110 Escherichia coli JJ1886 membrane protein YP_008721655.1 1643813 R 1355100 CDS YP_008721656.1 556551527 17430446 complement(1644259..1644777) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyltransferase 1644777 17430446 P423_08115 Escherichia coli JJ1886 N-acetyltransferase YP_008721656.1 1644259 R 1355100 CDS YP_008721657.1 556554515 17430447 1644984..1645220 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GntR family transcriptional regulator 1645220 17430447 P423_08120 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008721657.1 1644984 D 1355100 CDS YP_008721658.1 556551528 17430448 complement(1645258..1647360) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TonB-dependent receptor 1647360 17430448 P423_08125 Escherichia coli JJ1886 TonB-dependent receptor YP_008721658.1 1645258 R 1355100 CDS YP_008721659.1 556551529 17430449 1647602..1648663 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1648663 17430449 P423_08130 Escherichia coli JJ1886 hypothetical protein YP_008721659.1 1647602 D 1355100 CDS YP_008721660.1 556551530 17430450 complement(1648776..1650275) 1 NC_022648.1 involved in the transporte of L-asparagine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-asparagine permease 1650275 17430450 P423_08135 Escherichia coli JJ1886 L-asparagine permease YP_008721660.1 1648776 R 1355100 CDS YP_008721661.1 556551531 17430451 1651087..1652223 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1652223 17430451 P423_08140 Escherichia coli JJ1886 hypothetical protein YP_008721661.1 1651087 D 1355100 CDS YP_008721662.1 556551532 17430452 complement(1652294..1652863) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1652863 17430452 P423_08145 Escherichia coli JJ1886 hypothetical protein YP_008721662.1 1652294 R 1355100 CDS YP_008721663.1 556551533 17430453 1653038..1653883 1 NC_022648.1 catalyzes the addition of the acetyl moity of acetyl-CoA to an N-hydroxy-arylamine to form an N-acetoxyarylamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-hydroxyarylamine O-acetyltransferase 1653883 17430453 P423_08150 Escherichia coli JJ1886 N-hydroxyarylamine O-acetyltransferase YP_008721663.1 1653038 D 1355100 CDS YP_008721664.1 556551534 17430454 complement(1653979..1654872) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1654872 17430454 P423_08155 Escherichia coli JJ1886 hypothetical protein YP_008721664.1 1653979 R 1355100 CDS YP_008721665.1 556551535 17430455 complement(1654952..1655632) 1 NC_022648.1 with NarGJH catalyzes the reduction of nitrate; the gamma subunit localizes NarGHI to the membrane; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit gamma 1655632 narI 17430455 narI Escherichia coli JJ1886 nitrate reductase A subunit gamma YP_008721665.1 1654952 R 1355100 CDS YP_008721666.1 556551536 17430456 complement(1655629..1656324) 1 NC_022648.1 delta subunit of nitrate reductase 1; chaperone for the insertion of the molybdenum cofactor and assembly of nitrate reductase 1; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase molybdenum cofactor assembly chaperone NarJ 1656324 17430456 P423_08165 Escherichia coli JJ1886 nitrate reductase molybdenum cofactor assembly chaperone NarJ YP_008721666.1 1655629 R 1355100 CDS YP_008721667.1 556551537 17430457 complement(1656324..1657868) 1 NC_022648.1 with NarGJI catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli and in E. coli is expressed when nitrate levels are high; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit beta 1657868 narH 17430457 narH Escherichia coli JJ1886 nitrate reductase A subunit beta YP_008721667.1 1656324 R 1355100 CDS YP_008721668.1 556551538 17430458 complement(1657865..1661605) 1 NC_022648.1 with NarYV catalyzes the reduction of nitrate; the beta subunit is an iron sulfur cluster containing electron transfer subunit; one of 3 nitrate reductases in E. coli; expression of nitrate reductase Z is not dependent on nitrate levels; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase A subunit alpha 1661605 narZ 17430458 narZ Escherichia coli JJ1886 nitrate reductase A subunit alpha YP_008721668.1 1657865 R 1355100 CDS YP_008721669.1 556551539 17430459 complement(1661700..1663088) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite extrusion protein 2 1663088 17430459 P423_08180 Escherichia coli JJ1886 nitrite extrusion protein 2 YP_008721669.1 1661700 R 1355100 CDS YP_008721670.1 556551540 17430460 complement(1663361..1664242) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid exporter 1664242 17430460 P423_08185 Escherichia coli JJ1886 aromatic amino acid exporter YP_008721670.1 1663361 R 1355100 CDS YP_008721671.1 556554516 17430461 1664474..1665061 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfate ABC transporter substrate-binding protein 1665061 17430461 P423_08190 Escherichia coli JJ1886 sulfate ABC transporter substrate-binding protein YP_008721671.1 1664474 D 1355100 CDS YP_008721672.1 556554517 17430462 1665110..1667521 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; formate dehydrogenase subunit alpha 1667521 17430462 P423_08195 Escherichia coli JJ1886 formate dehydrogenase subunit alpha YP_008721672.1 1665110 D 1355100 CDS YP_008721673.1 556551541 17430463 1667534..1668418 1 NC_022648.1 beta subunit; involved in the use of formate as an electron donor during aerobic respiration; acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit beta 1668418 17430463 P423_08200 Escherichia coli JJ1886 formate dehydrogenase-N subunit beta YP_008721673.1 1667534 D 1355100 CDS YP_008721674.1 556551542 17430464 1668411..1669064 1 NC_022648.1 cytochrome b556(FDO) component; heme containing; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit gamma 1669064 17430464 P423_08205 Escherichia coli JJ1886 formate dehydrogenase-N subunit gamma YP_008721674.1 1668411 D 1355100 CDS YP_008721675.1 556551543 17430465 complement(1669114..1669398) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 1669398 17430465 P423_08210 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008721675.1 1669114 R 1355100 CDS YP_008721676.1 556551544 17430466 complement(1669861..1670871) 1 NC_022648.1 similar to zinc-dependent eukaryotic ADH enzymes and distinct from fermentative ADHs; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetaldehyde reductase 1670871 adhP 17430466 adhP Escherichia coli JJ1886 acetaldehyde reductase YP_008721676.1 1669861 R 1355100 CDS YP_008721677.1 556551545 17430467 complement(1671005..1672702) 1 NC_022648.1 malic enzyme; oxaloacetate-decarboxylating; NAD-dependent; catalyzes the formation of pyruvate form malate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate dehydrogenase 1672702 17430467 P423_08220 Escherichia coli JJ1886 malate dehydrogenase YP_008721677.1 1671005 R 1355100 CDS YP_008721678.1 556554518 17430468 1672751..1672840 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1672840 17430468 P423_08225 Escherichia coli JJ1886 hypothetical protein YP_008721678.1 1672751 D 1355100 CDS YP_008721679.1 556551546 17430469 complement(1672858..1672995) 1 NC_022648.1 protein D; stationary-phase-induced ribosome-associated; in Escherichia coli this protein becomes associated with the ribosome; expression increases during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S22 1672995 rpsV 17430469 rpsV Escherichia coli JJ1886 30S ribosomal protein S22 YP_008721679.1 1672858 R 1355100 CDS YP_008721680.1 556551547 17430470 complement(1673097..1673312) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm-dependent modulation protein 1673312 17430470 P423_08235 Escherichia coli JJ1886 biofilm-dependent modulation protein YP_008721680.1 1673097 R 1355100 CDS YP_008721681.1 556551548 17430471 1673655..1674086 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peroxiredoxin 1674086 17430471 P423_08240 Escherichia coli JJ1886 peroxiredoxin YP_008721681.1 1673655 D 1355100 CDS YP_008721682.1 556551549 17430472 complement(1674276..1676675) 1 NC_022648.1 heme-regulated phosphodiesterase with phosphodiesterase activity with cGMP; cold- and stationary phase-induced bioflim regulator; oxygen sensor; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate phosphodiesterase 1676675 17430472 P423_08245 Escherichia coli JJ1886 diguanylate phosphodiesterase YP_008721682.1 1674276 R 1355100 CDS YP_008721683.1 556554519 17430473 complement(1676678..1676917) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1676917 17430473 P423_08250 Escherichia coli JJ1886 hypothetical protein YP_008721683.1 1676678 R 1355100 CDS YP_008721684.1 556551550 17430474 complement(1677241..1678560) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1678560 17430474 P423_08255 Escherichia coli JJ1886 hypothetical protein YP_008721684.1 1677241 R 1355100 CDS YP_008721685.1 556551551 17430475 complement(1678691..1680226) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 1680226 17430475 P423_08260 Escherichia coli JJ1886 antiporter YP_008721685.1 1678691 R 1355100 CDS YP_008721686.1 556551552 17430476 complement(1680382..1681782) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate decarboxylase 1681782 17430476 P423_08265 Escherichia coli JJ1886 glutamate decarboxylase YP_008721686.1 1680382 R 1355100 CDS YP_008721687.1 556554520 17430477 complement(1681793..1681936) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1681936 17430477 P423_08270 Escherichia coli JJ1886 hypothetical protein YP_008721687.1 1681793 R 1355100 CDS YP_008721688.1 556554521 17430478 complement(1682144..1682998) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptidase M16 1682998 17430478 P423_08275 Escherichia coli JJ1886 peptidase M16 YP_008721688.1 1682144 R 1355100 CDS YP_008721689.1 556551553 17430479 complement(1683067..1684224) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; radical SAM protein 1684224 17430479 P423_08280 Escherichia coli JJ1886 radical SAM protein YP_008721689.1 1683067 R 1355100 CDS YP_008721690.1 556551554 17430480 complement(1684276..1685958) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfatase 1685958 17430480 P423_08285 Escherichia coli JJ1886 sulfatase YP_008721690.1 1684276 R 1355100 CDS YP_008721691.1 556551555 17430481 complement(1686360..1687121) 1 NC_022648.1 regulates the cellular response to acid resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1687121 17430481 P423_08290 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008721691.1 1686360 R 1355100 CDS YP_008721692.1 556551556 17430482 complement(1687196..1687393) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Two-protein-system connector protein SafA 1687393 17430482 P423_08295 Escherichia coli JJ1886 Two-protein-system connector protein SafA YP_008721692.1 1687196 R 1355100 CDS YP_008721693.1 556551557 17430483 complement(1687641..1689920) 1 NC_022648.1 in Escherichia coli it may be involved in repression of type III secretion system (TTSS) genes of the host cell; involved with increased resistance to low pH; member of the prokaryotic molybdopterin-containing oxidoreductase family; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1689920 17430483 P423_08300 Escherichia coli JJ1886 oxidoreductase YP_008721693.1 1687641 R 1355100 CDS YP_008721694.1 556551558 17430484 complement(1690259..1691173) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimH 1691173 17430484 P423_08305 Escherichia coli JJ1886 fimbrial protein FimH YP_008721694.1 1690259 R 1355100 CDS YP_008721695.1 556551559 17430485 complement(1691233..1691736) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimG 1691736 17430485 P423_08310 Escherichia coli JJ1886 fimbrial protein FimG YP_008721695.1 1691233 R 1355100 CDS YP_008721696.1 556551560 17430486 complement(1691749..1692279) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein ydeS 1692279 17430486 P423_08315 Escherichia coli JJ1886 fimbrial protein ydeS YP_008721696.1 1691749 R 1355100 CDS YP_008721697.1 556551561 17430487 complement(1692293..1694944) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 1694944 17430487 P423_08320 Escherichia coli JJ1886 fimbrial protein FimD YP_008721697.1 1692293 R 1355100 CDS YP_008721698.1 556551562 17430488 complement(1694986..1695696) 1 NC_022648.1 involved in type 1 fimbriae biosynthesis, interacts with FimH; Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial chaperone protein FimC 1695696 17430488 P423_08325 Escherichia coli JJ1886 fimbrial chaperone protein FimC YP_008721698.1 1694986 R 1355100 CDS YP_008721699.1 556551563 17430489 complement(1696058..1696621) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type-1 fimbrial protein subunit A 1696621 fimA 17430489 fimA Escherichia coli JJ1886 type-1 fimbrial protein subunit A YP_008721699.1 1696058 R 1355100 CDS YP_008721700.1 556554522 17430490 complement(1697532..1698854) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; serine/threonine protein kinase 1698854 17430490 P423_08335 Escherichia coli JJ1886 serine/threonine protein kinase YP_008721700.1 1697532 R 1355100 CDS YP_008721701.1 556551564 17430491 complement(1698854..1699120) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 1699120 17430491 P423_08340 Escherichia coli JJ1886 antitoxin YP_008721701.1 1698854 R 1355100 CDS YP_008721702.1 556551565 17430492 1699428..1700186 1 NC_022648.1 catalyzes the formation of (E)-3-(methoxycarbonyl)pent-2-enedioate and S-adenosyl-L-homocysteine from S-adenosyl-L-methionine and trans-aconitate; Derived by automated computational analysis using gene prediction method: Protein Homology.; trans-aconitate 2-methyltransferase 1700186 17430492 P423_08345 Escherichia coli JJ1886 trans-aconitate 2-methyltransferase YP_008721702.1 1699428 D 1355100 CDS YP_008721703.1 556551566 17430493 complement(1700190..1701104) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1701104 17430493 P423_08350 Escherichia coli JJ1886 hypothetical protein YP_008721703.1 1700190 R 1355100 CDS YP_008721704.1 556551567 17430494 complement(1701301..1702752) 1 NC_022648.1 catalyzes the formation of D-tagaturonate from D-altronate; Derived by automated computational analysis using gene prediction method: Protein Homology.; altronate oxidoreductase 1702752 17430494 P423_08355 Escherichia coli JJ1886 altronate oxidoreductase YP_008721704.1 1701301 R 1355100 CDS YP_008721705.1 556551568 17430495 complement(1702979..1704397) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 1704397 17430495 P423_08360 Escherichia coli JJ1886 diguanylate cyclase YP_008721705.1 1702979 R 1355100 CDS YP_008721706.1 556551569 17430496 complement(1704536..1704895) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1704895 17430496 P423_08365 Escherichia coli JJ1886 hypothetical protein YP_008721706.1 1704536 R 1355100 CDS YP_008721707.1 556551570 17430497 complement(1704895..1705821) 1 NC_022648.1 catalyzes the formation of glutamate from glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminase 1705821 17430497 P423_08370 Escherichia coli JJ1886 glutaminase YP_008721707.1 1704895 R 1355100 CDS YP_008721708.1 556551571 17430498 complement(1705885..1707273) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate dehydrogenase 1707273 17430498 P423_08375 Escherichia coli JJ1886 succinate dehydrogenase YP_008721708.1 1705885 R 1355100 CDS YP_008721709.1 556551572 17430499 1707374..1708255 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1708255 17430499 P423_08380 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008721709.1 1707374 D 1355100 CDS YP_008721710.1 556551573 17430500 1708594..1709784 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose transporter 1709784 17430500 P423_08385 Escherichia coli JJ1886 arabinose transporter YP_008721710.1 1708594 D 1355100 CDS YP_008721711.1 556551574 17430501 complement(1709809..1710474) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1710474 17430501 P423_08390 Escherichia coli JJ1886 membrane protein YP_008721711.1 1709809 R 1355100 CDS YP_008721712.1 556551575 17430502 1710686..1711120 1 NC_022648.1 Repressor of the marRAB operon which is involved in the activation of both antibiotic resistance and oxidative stress genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1711120 17430502 P423_08395 Escherichia coli JJ1886 transcriptional regulator YP_008721712.1 1710686 D 1355100 CDS YP_008721713.1 556551576 17430503 1711141..1711524 1 NC_022648.1 transcriptional activator of genes involved in the multiple antibiotic resistance (Mar) phenotype; also activates sodA, zwf and micF; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1711524 17430503 P423_08400 Escherichia coli JJ1886 transcriptional regulator YP_008721713.1 1711141 D 1355100 CDS YP_008721714.1 556551577 17430504 1711556..1711774 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1711774 17430504 P423_08405 Escherichia coli JJ1886 hypothetical protein YP_008721714.1 1711556 D 1355100 CDS YP_008721715.1 556551578 17430505 complement(1711805..1712704) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; O-acetylserine/cysteine export protein 1712704 17430505 P423_08410 Escherichia coli JJ1886 O-acetylserine/cysteine export protein YP_008721715.1 1711805 R 1355100 CDS YP_008721716.1 556551579 17430506 1712899..1714086 1 NC_022648.1 YdeF; uncharacterized member of the major facilitator superfamily (MFS) of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1714086 17430506 P423_08415 Escherichia coli JJ1886 transporter YP_008721716.1 1712899 D 1355100 CDS YP_008721717.1 556554523 17430507 1714213..1714308 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 1714308 17430507 P423_08420 Escherichia coli JJ1886 membrane protein YP_008721717.1 1714213 D 1355100 CDS YP_008721718.1 556551580 17430508 complement(1714527..1715417) 1 NC_022648.1 required for pgaD induction; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 1715417 17430508 P423_08425 Escherichia coli JJ1886 diguanylate cyclase YP_008721718.1 1714527 R 1355100 CDS YP_008721719.1 556554524 17430509 1715683..1715835 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1715835 17430509 P423_08430 Escherichia coli JJ1886 hypothetical protein YP_008721719.1 1715683 D 1355100 CDS YP_008721720.1 556551581 17430510 complement(1715924..1717969) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dipeptidyl carboxypeptidase II 1717969 17430510 P423_08435 Escherichia coli JJ1886 dipeptidyl carboxypeptidase II YP_008721720.1 1715924 R 1355100 CDS YP_008721721.1 556551582 17430511 1718106..1718852 1 NC_022648.1 NADP(+)-dependent; catalyzes the formation of 3-hydroxypropionate from the toxic malonic semialdehyde, catalyzes the formation of 2-aminomalonate-semialdehyde from L-serine; can also use 3-hydroxybutyrate, 3-hydroxy-isobutyrate, D-threonine, L-allo-threonine,D-serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; malonic semialdehyde reductase 1718852 17430511 P423_08440 Escherichia coli JJ1886 malonic semialdehyde reductase YP_008721721.1 1718106 D 1355100 CDS YP_008721722.1 556551583 17430512 1718941..1719627 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 1719627 17430512 P423_08445 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008721722.1 1718941 D 1355100 CDS YP_008721723.1 556551584 17430513 1719804..1720007 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1720007 17430513 P423_08450 Escherichia coli JJ1886 hypothetical protein YP_008721723.1 1719804 D 1355100 CDS YP_008721724.1 556551585 17430514 complement(1720043..1721503) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 1721503 17430514 P423_08455 Escherichia coli JJ1886 D-mannonate oxidoreductase YP_008721724.1 1720043 R 1355100 CDS YP_008721725.1 556554525 17430515 complement(1721592..1722920) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1722920 17430515 P423_08460 Escherichia coli JJ1886 hypothetical protein YP_008721725.1 1721592 R 1355100 CDS YP_008721726.1 556551586 17430516 complement(1723017..1724036) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate oxidoreductase 1724036 17430516 P423_08465 Escherichia coli JJ1886 galactonate oxidoreductase YP_008721726.1 1723017 R 1355100 CDS YP_008721727.1 556551587 17430517 complement(1724048..1725262) 1 NC_022648.1 starvation-sensing protein; maybe involved in homoserine lactone degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional D-altronate/D-mannonate dehydratase 1725262 17430517 P423_08470 Escherichia coli JJ1886 bifunctional D-altronate/D-mannonate dehydratase YP_008721727.1 1724048 R 1355100 CDS YP_008721728.1 556551588 17430518 complement(1725468..1725794) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1725794 17430518 P423_08475 Escherichia coli JJ1886 membrane protein YP_008721728.1 1725468 R 1355100 CDS YP_008721729.1 556551589 17430519 1725929..1726270 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1726270 17430519 P423_08480 Escherichia coli JJ1886 hypothetical protein YP_008721729.1 1725929 D 1355100 CDS YP_008721730.1 556551590 17430520 1726305..1726865 1 NC_022648.1 catalyzes the formation of N(1)- and N(8)-acetylspermidine from spermidine; Derived by automated computational analysis using gene prediction method: Protein Homology.; spermidine N1-acetyltransferase 1726865 17430520 P423_08485 Escherichia coli JJ1886 spermidine N1-acetyltransferase YP_008721730.1 1726305 D 1355100 CDS YP_008721731.1 556551591 17430521 complement(1726868..1727578) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 1727578 17430521 P423_08490 Escherichia coli JJ1886 lipoprotein YP_008721731.1 1726868 R 1355100 CDS YP_008721732.1 556551592 17430522 1727686..1727991 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1727991 17430522 P423_08495 Escherichia coli JJ1886 membrane protein YP_008721732.1 1727686 D 1355100 CDS YP_008721733.1 556551593 17430523 1728190..1730616 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit A 1730616 17430523 P423_08500 Escherichia coli JJ1886 dimethyl sulfoxide reductase subunit A YP_008721733.1 1728190 D 1355100 CDS YP_008721734.1 556551594 17430525 1732257..1732874 1 NC_022648.1 oxidoreductase, Fe-S subunit; terminal electron transfer protein for the reduction of DMSO; Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit B 1732874 17430525 P423_08510 Escherichia coli JJ1886 dimethyl sulfoxide reductase subunit B YP_008721734.1 1732257 D 1355100 CDS YP_008721735.1 556551595 17430526 1732876..1733730 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dimethyl sulfoxide reductase subunit H 1733730 17430526 P423_08515 Escherichia coli JJ1886 dimethyl sulfoxide reductase subunit H YP_008721735.1 1732876 D 1355100 CDS YP_008721736.1 556551596 17430527 1733773..1734387 1 NC_022648.1 binds to the twin-arginine signal peptides of certain proteins, including dimethylsulfoxide reductase and trimethylamine N-oxide reductase that are translocated to the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; twin-argninine leader-binding protein DmsD 1734387 17430527 P423_08520 Escherichia coli JJ1886 twin-argninine leader-binding protein DmsD YP_008721736.1 1733773 D 1355100 CDS YP_008721737.1 556551597 17430528 1734584..1735840 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; voltage-gated ClC-type chloride channel ClcB 1735840 17430528 P423_08525 Escherichia coli JJ1886 voltage-gated ClC-type chloride channel ClcB YP_008721737.1 1734584 D 1355100 CDS YP_008721738.1 556551598 17430529 complement(1735793..1736488) 1 NC_022648.1 DTB synthetase; dethiobiotin synthase; involved in production of dethiobiotin from ATP and 7,8-diaminononanoate and carbon dioxide; contains magnesium; Derived by automated computational analysis using gene prediction method: Protein Homology.; dithiobiotin synthetase 1736488 bioD 17430529 bioD Escherichia coli JJ1886 dithiobiotin synthetase YP_008721738.1 1735793 R 1355100 CDS YP_008721739.1 556551599 17430530 complement(1736613..1737833) 1 NC_022648.1 mlc, controls the expression of genes involved in the phosphotransferase and phosphoenolpyruvate systems, regulates genes involved in the uptake of sugars; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1737833 17430530 P423_08535 Escherichia coli JJ1886 transcriptional regulator YP_008721739.1 1736613 R 1355100 CDS YP_008721740.1 556551600 17430531 complement(1737968..1738861) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1738861 17430531 P423_08540 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008721740.1 1737968 R 1355100 CDS YP_008721741.1 556551601 17430532 1738968..1740221 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1740221 17430532 P423_08545 Escherichia coli JJ1886 membrane protein YP_008721741.1 1738968 D 1355100 CDS YP_008721742.1 556551602 17430533 1740618..1740953 1 NC_022648.1 required for growth and survival under moderately acid conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-shock protein 1740953 17430533 P423_08550 Escherichia coli JJ1886 acid-shock protein YP_008721742.1 1740618 D 1355100 CDS YP_008721743.1 556554526 17430534 1741046..1741129 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1741129 17430534 P423_08555 Escherichia coli JJ1886 hypothetical protein YP_008721743.1 1741046 D 1355100 CDS YP_008721744.1 556551603 17430535 1741229..1742050 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine protease 1742050 17430535 P423_08560 Escherichia coli JJ1886 serine protease YP_008721744.1 1741229 D 1355100 CDS YP_008721745.1 556551604 17430536 complement(1742089..1742418) 1 NC_022648.1 with MdtJ is involved in resistance to deoxycholate, nalidixic acid, fosfomycin, and SDS; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1742418 17430536 P423_08565 Escherichia coli JJ1886 multidrug transporter YP_008721745.1 1742089 R 1355100 CDS YP_008721746.1 556551605 17430537 complement(1742405..1742770) 1 NC_022648.1 with MdtI is involved in resistance to deoxycholate , nalidixic acid, fosfomycin, and SDS; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1742770 17430537 P423_08570 Escherichia coli JJ1886 multidrug transporter YP_008721746.1 1742405 R 1355100 CDS YP_008721747.1 556551606 17430538 1743182..1744216 1 NC_022648.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; pheromone autoinducer 2 transporter 1744216 tqsA 17430538 tqsA Escherichia coli JJ1886 pheromone autoinducer 2 transporter YP_008721747.1 1743182 D 1355100 CDS YP_008721748.1 556551607 17430539 complement(1744241..1745629) 1 NC_022648.1 catalyzes reversible transfer of hydride ion equivalent between NAD and NADP; membrane-bound proton pump that translocates protons from cytosolic to periplasmic side of the inner membrane; forms a tetramer composed of two alpha and 2 beta subunits; AB-stereospecific enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridine nucleotide transhydrogenase 1745629 pntB 17430539 pntB Escherichia coli JJ1886 pyridine nucleotide transhydrogenase YP_008721748.1 1744241 R 1355100 CDS YP_008721749.1 556551608 17430540 complement(1745640..1747172) 1 NC_022648.1 forms a tetramer composed of 2 alpha subunits and 2 beta subunits in the inner membrane; involved in catalyzing transfer of hydride ion equivalents between NAD and NADP; stereospecific (AB-specific); functions as a proton pump by translocating protons from cytoplasm to periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P) transhydrogenase subunit alpha 1747172 pntA 17430540 pntA Escherichia coli JJ1886 NAD(P) transhydrogenase subunit alpha YP_008721749.1 1745640 R 1355100 CDS YP_008721750.1 556551609 17430541 1747696..1748640 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1748640 17430541 P423_08590 Escherichia coli JJ1886 hypothetical protein YP_008721750.1 1747696 D 1355100 CDS YP_008721751.1 556551610 17430542 1748826..1750208 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine:ornithine antiporter 1750208 17430542 P423_08595 Escherichia coli JJ1886 arginine:ornithine antiporter YP_008721751.1 1748826 D 1355100 CDS YP_008721752.1 556551611 17430543 1750245..1750967 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydromonapterin reductase 1750967 17430543 P423_08600 Escherichia coli JJ1886 dihydromonapterin reductase YP_008721752.1 1750245 D 1355100 CDS YP_008721753.1 556551612 17430544 complement(1750964..1751299) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1751299 17430544 P423_08605 Escherichia coli JJ1886 membrane protein YP_008721753.1 1750964 R 1355100 CDS YP_008721754.1 556551613 17430545 1751428..1752147 1 NC_022648.1 response regulator in two-component regulatory system with RstB; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1752147 17430545 P423_08610 Escherichia coli JJ1886 transcriptional regulator YP_008721754.1 1751428 D 1355100 CDS YP_008721755.1 556551614 17430546 1752151..1753452 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein RstB 1753452 17430546 P423_08615 Escherichia coli JJ1886 sensor protein RstB YP_008721755.1 1752151 D 1355100 CDS YP_008721756.1 556551615 17430547 1753516..1754457 1 NC_022648.1 binds to DNA replication terminator sequences to prevent passage of replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 1754457 17430547 P423_08620 Escherichia coli JJ1886 DNA-binding protein YP_008721756.1 1753516 D 1355100 CDS YP_008721757.1 556551616 17430548 complement(1754454..1755857) 1 NC_022648.1 class II family (does not require metal); tetrameric enzyme; fumarase C; reversibly converts (S)-malate to fumarate and water; functions in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate hydratase 1755857 fumC 17430548 fumC Escherichia coli JJ1886 fumarate hydratase YP_008721757.1 1754454 R 1355100 CDS YP_008721758.1 556551617 17430549 complement(1756000..1757646) 1 NC_022648.1 catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate hydratase 1757646 17430549 P423_08630 Escherichia coli JJ1886 fumarate hydratase YP_008721758.1 1756000 R 1355100 CDS YP_008721759.1 556551618 17430550 1757845..1759020 1 NC_022648.1 catalyzes the formation of of fructose 6-phosphate from mannose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannose-6-phosphate isomerase 1759020 17430550 P423_08635 Escherichia coli JJ1886 mannose-6-phosphate isomerase YP_008721759.1 1757845 D 1355100 CDS YP_008721760.1 556551619 17430551 1759121..1760629 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1760629 17430551 P423_08640 Escherichia coli JJ1886 hypothetical protein YP_008721760.1 1759121 D 1355100 CDS YP_008721761.1 556551620 17433815 complement(1763348..1765159) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-glucuronidase 1765159 17433815 P423_08650 Escherichia coli JJ1886 beta-D-glucuronidase YP_008721761.1 1763348 R 1355100 CDS YP_008721762.1 556551621 17430554 complement(1765549..1766139) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 1766139 17430554 P423_08655 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008721762.1 1765549 R 1355100 CDS YP_008721763.1 556551622 17430555 complement(1766368..1767135) 1 NC_022648.1 Acts on the hydroxyl group at position 7 of the steroid frame; Derived by automated computational analysis using gene prediction method: Protein Homology.; 7-alpha-hydroxysteroid dehydrogenase 1767135 17430555 P423_08660 Escherichia coli JJ1886 7-alpha-hydroxysteroid dehydrogenase YP_008721763.1 1766368 R 1355100 CDS YP_008721764.1 556551623 17430556 complement(1767247..1768275) 1 NC_022648.1 regulates malXY which are involved in maltose-glucose transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 1768275 17430556 P423_08665 Escherichia coli JJ1886 LacI family transcriptional regulator YP_008721764.1 1767247 R 1355100 CDS YP_008721765.1 556551624 17430557 1768450..1770042 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS maltose transporter subunit IICB 1770042 17430557 P423_08670 Escherichia coli JJ1886 PTS maltose transporter subunit IICB YP_008721765.1 1768450 D 1355100 CDS YP_008721766.1 556551625 17430558 1770052..1771224 1 NC_022648.1 catalyzes the formation of homocysteine and pyruvate from cystathionine; also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase 1771224 17430558 P423_08675 Escherichia coli JJ1886 aminotransferase YP_008721766.1 1770052 D 1355100 CDS YP_008721767.1 556551626 17430559 1771328..1772329 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosine deaminase 1772329 17430559 P423_08680 Escherichia coli JJ1886 adenosine deaminase YP_008721767.1 1771328 D 1355100 CDS YP_008721768.1 556551627 17430560 complement(1772365..1773405) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1773405 17430560 P423_08685 Escherichia coli JJ1886 oxidoreductase YP_008721768.1 1772365 R 1355100 CDS YP_008721769.1 556554527 17430561 1773588..1773773 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1773773 17430561 P423_08690 Escherichia coli JJ1886 hypothetical protein YP_008721769.1 1773588 D 1355100 CDS YP_008721770.1 556551628 17430562 1773862..1774260 1 NC_022648.1 YdgT; in E. coli, when complexed with H-NS or StpA binds a 26 base-pair DNA sequence of oriC; seems to play a role in optimizing the activity of oriC; non-essential; Hha protein paralog; in an hha mutant background, cnu is overexpressed and can compensate hha-induced phenotypes; Derived by automated computational analysis using gene prediction method: Protein Homology.; oriC-binding nucleoid-associated protein 1774260 17430562 P423_08695 Escherichia coli JJ1886 oriC-binding nucleoid-associated protein YP_008721770.1 1773862 D 1355100 CDS YP_008721771.1 556551629 17430563 1774346..1774786 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1774786 17430563 P423_08700 Escherichia coli JJ1886 membrane protein YP_008721771.1 1774346 D 1355100 CDS YP_008721772.1 556551630 17430564 1774863..1775444 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transport complex RsxE subunit 1775444 17430564 P423_08705 Escherichia coli JJ1886 electron transport complex RsxE subunit YP_008721772.1 1774863 D 1355100 CDS YP_008721773.1 556551631 17430565 1775444..1776022 1 NC_022648.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter RnfD 1776022 17430565 P423_08710 Escherichia coli JJ1886 electron transporter RnfD YP_008721773.1 1775444 D 1355100 CDS YP_008721774.1 556551632 17430566 1776015..1778435 1 NC_022648.1 part of membrane-bound complex thought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter RnfC 1778435 17430566 P423_08715 Escherichia coli JJ1886 electron transporter RnfC YP_008721774.1 1776015 D 1355100 CDS YP_008721775.1 556551633 17430567 1778436..1779494 1 NC_022648.1 RnfD; RsxD; required for nitrogen fixation in Rhodobacter capsulatus; part of a membrane-bound complex thought to be involved in electron transport to nitrogenase; in Escherichia coli this gene is part of a cluster controlling SoxR-mediated induction of the SoxS transcription factor in the absence of oxidizing agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter RnfG 1779494 rnfD 17430567 rnfD Escherichia coli JJ1886 electron transporter RnfG YP_008721775.1 1778436 D 1355100 CDS YP_008721776.1 556551634 17430568 1779498..1780118 1 NC_022648.1 part of membrane-bound complex hought to be involved in electron transport to nitrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transport complex protein RsxA 1780118 17430568 P423_08725 Escherichia coli JJ1886 electron transport complex protein RsxA YP_008721776.1 1779498 D 1355100 CDS YP_008721777.1 556551635 17430569 1780122..1780817 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor G 1780817 17430569 P423_08730 Escherichia coli JJ1886 elongation factor G YP_008721777.1 1780122 D 1355100 CDS YP_008721778.1 556551636 17430570 1780817..1781452 1 NC_022648.1 DNA-(apurinic or apyrimidinic site) lyase; has apurinic or apyrimidinic endonuclease activity and DNA N-glycosylase activity; removed damaged DNA at cytosines, thymines and guanines; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease IV 1781452 17430570 P423_08735 Escherichia coli JJ1886 endonuclease IV YP_008721778.1 1780817 D 1355100 CDS YP_008721779.1 556554528 17430571 1781580..1781780 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1781780 17430571 P423_08740 Escherichia coli JJ1886 hypothetical protein YP_008721779.1 1781580 D 1355100 CDS YP_008721780.1 556551637 17430572 1782063..1783565 1 NC_022648.1 mutations in this gene confer resistance to the toxic peptide alafosfalin in Salmonella typhimurium; member of proton-dependent oligopeptide transport (POT) system family; in Escherichia coli this gene is regulated by OmpR although not via osmoregulation; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 1783565 tppB 17430572 tppB Escherichia coli JJ1886 peptide ABC transporter permease YP_008721780.1 1782063 D 1355100 CDS YP_008721781.1 556551638 17430573 1783671..1784276 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathionine S-transferase 1784276 17430573 P423_08750 Escherichia coli JJ1886 glutathionine S-transferase YP_008721781.1 1783671 D 1355100 CDS YP_008721782.1 556551639 17430574 complement(1784320..1785180) 1 NC_022648.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxamine kinase 1785180 17430574 P423_08755 Escherichia coli JJ1886 pyridoxamine kinase YP_008721782.1 1784320 R 1355100 CDS YP_008721783.1 556551640 17430575 complement(1785242..1786516) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosyl-tRNA synthetase 1786516 17430575 P423_08760 Escherichia coli JJ1886 tyrosyl-tRNA synthetase YP_008721783.1 1785242 R 1355100 CDS YP_008721784.1 556551641 17430576 complement(1786645..1787301) 1 NC_022648.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxamine 5'-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxamine 5'-phosphate oxidase 1787301 17430576 P423_08765 Escherichia coli JJ1886 pyridoxamine 5'-phosphate oxidase YP_008721784.1 1786645 R 1355100 CDS YP_008721785.1 556551642 17430577 complement(1787360..1787689) 1 NC_022648.1 MliC; membrane-bound lysozyme inhibitor of c-type lysozyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme inhibitor 1787689 17430577 P423_08770 Escherichia coli JJ1886 lysozyme inhibitor YP_008721785.1 1787360 R 1355100 CDS YP_008721786.1 556551643 17430578 complement(1787787..1788896) 1 NC_022648.1 catalyzes hydrolysis of 1,6-anhydro bond of anyhydro-N-acetylmuramic acid (anhMurNAc) and phosphorylates anhMurNAc to produce N-acetyl-muramate-6-phosphate; involved in murein recycling; Derived by automated computational analysis using gene prediction method: Protein Homology.; anhydro-N-acetylmuramic acid kinase 1788896 anmK 17430578 anmK Escherichia coli JJ1886 anhydro-N-acetylmuramic acid kinase YP_008721786.1 1787787 R 1355100 CDS YP_008721787.1 556551644 17430579 1789170..1789637 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein pcp 1789637 17430579 P423_08780 Escherichia coli JJ1886 outer membrane lipoprotein pcp YP_008721787.1 1789170 D 1355100 CDS YP_008721788.1 556551645 17430580 complement(1789684..1790124) 1 NC_022648.1 Transcription regulator that can both activate or repress expression; Derived by automated computational analysis using gene prediction method: Protein Homology.; MarR family transcriptional regulator 1790124 17430580 P423_08785 Escherichia coli JJ1886 MarR family transcriptional regulator YP_008721788.1 1789684 R 1355100 CDS YP_008721789.1 556551646 17430581 1790319..1790555 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1790555 17430581 P423_08790 Escherichia coli JJ1886 membrane protein YP_008721789.1 1790319 D 1355100 CDS YP_008721790.1 556551647 17430582 1790558..1791415 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1791415 17430582 P423_08795 Escherichia coli JJ1886 membrane protein YP_008721790.1 1790558 D 1355100 CDS YP_008721791.1 556551648 17430583 1791415..1793427 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fusaric acid resistance protein 1793427 17430583 P423_08800 Escherichia coli JJ1886 fusaric acid resistance protein YP_008721791.1 1791415 D 1355100 CDS YP_008721792.1 556551649 17430584 complement(1793428..1793964) 1 NC_022648.1 SodC; copper and zinc binding; converts superoxide radicals to hydrogen peroxide and water; Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase 1793964 17430584 P423_08805 Escherichia coli JJ1886 superoxide dismutase YP_008721792.1 1793428 R 1355100 CDS YP_008721793.1 556551650 17430585 complement(1794030..1794926) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1794926 17430585 P423_08810 Escherichia coli JJ1886 oxidoreductase YP_008721793.1 1794030 R 1355100 CDS YP_008721794.1 556551651 17430586 complement(1794975..1795352) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1795352 17430586 P423_08815 Escherichia coli JJ1886 hypothetical protein YP_008721794.1 1794975 R 1355100 CDS YP_008721795.1 556554529 17430587 1795401..1795916 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 1795916 17430587 P423_08820 Escherichia coli JJ1886 transcriptional regulator YP_008721795.1 1795401 D 1355100 CDS YP_008721796.1 556551652 17430588 1795953..1797050 1 NC_022648.1 FMN-linked; catalyzes the formation of N-ethylsuccinimide from N-ethylmaleimide; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-ethylmaleimide reductase 1797050 17430588 P423_08825 Escherichia coli JJ1886 N-ethylmaleimide reductase YP_008721796.1 1795953 D 1355100 CDS YP_008721797.1 556551653 17430589 1797131..1797538 1 NC_022648.1 Ni-dependent; catalyzes the formation of S-lactoylglutathione from methylglyoxal and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; glyoxalase I 1797538 17430589 P423_08830 Escherichia coli JJ1886 glyoxalase I YP_008721797.1 1797131 D 1355100 CDS YP_008721798.1 556551654 17430590 1797641..1798288 1 NC_022648.1 Responsible for the end-turnover of tRNA: specifically removes the terminal AMP residue from uncharged tRNA (tRNA-C-C-A); Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease T 1798288 17430590 P423_08835 Escherichia coli JJ1886 ribonuclease T YP_008721798.1 1797641 D 1355100 CDS YP_008721799.1 556551655 17430591 complement(1798660..1799007) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 1799007 17430591 P423_08840 Escherichia coli JJ1886 glutaredoxin YP_008721799.1 1798660 R 1355100 CDS YP_008721800.1 556551656 17430592 1799342..1800169 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 1800169 17430592 P423_08845 Escherichia coli JJ1886 endopeptidase YP_008721800.1 1799342 D 1355100 CDS YP_008721801.1 556551657 17430593 1800297..1800878 1 NC_022648.1 SodB; iron binding; present under aerobic and anaerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase 1800878 17430593 P423_08850 Escherichia coli JJ1886 superoxide dismutase YP_008721801.1 1800297 D 1355100 CDS YP_008721802.1 556551658 17430594 complement(1801024..1802193) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 1802193 17430594 P423_08855 Escherichia coli JJ1886 MFS transporter YP_008721802.1 1801024 R 1355100 CDS YP_008721803.1 556554530 17430595 complement(1802359..1802448) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1802448 17430595 P423_08860 Escherichia coli JJ1886 hypothetical protein YP_008721803.1 1802359 R 1355100 CDS YP_008721804.1 556551659 17430596 1802747..1803772 1 NC_022648.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1803772 17430596 P423_08865 Escherichia coli JJ1886 transcriptional regulator YP_008721804.1 1802747 D 1355100 CDS YP_008721805.1 556551660 17430597 complement(1803769..1804701) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 1804701 17430597 P423_08870 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008721805.1 1803769 R 1355100 CDS YP_008721806.1 556551661 17430598 1804814..1806025 1 NC_022648.1 uncharacterized member of the major facilitator superfamily (MFS); Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1806025 17430598 P423_08875 Escherichia coli JJ1886 transporter YP_008721806.1 1804814 D 1355100 CDS YP_008721807.1 556551662 17430599 1806316..1807464 1 NC_022648.1 catalyzes the transfer of a methylene group from S-adenosyl-L-methionine to the cis double bond of an unsaturated fatty acid chain resulting in the replacement of the double bond with a methylene bridge; Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclopropane fatty acyl phospholipid synthase 1807464 17430599 P423_08880 Escherichia coli JJ1886 cyclopropane fatty acyl phospholipid synthase YP_008721807.1 1806316 D 1355100 CDS YP_008721808.1 556551663 17430600 complement(1807504..1808145) 1 NC_022648.1 catalyzes the formation of riboflavin from 6,7-dimethyl-8-(1-D-ribityl)lumazine; Derived by automated computational analysis using gene prediction method: Protein Homology.; riboflavin synthase subunit alpha 1808145 17430600 P423_08885 Escherichia coli JJ1886 riboflavin synthase subunit alpha YP_008721808.1 1807504 R 1355100 CDS YP_008721809.1 556551664 17430601 1808360..1809733 1 NC_022648.1 NorM; MdtK; functions as a Na(+)/drug antiporter; inactivation in Vibrio cholerae results in susceptibility to fluoroquinolones; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 1809733 17430601 P423_08890 Escherichia coli JJ1886 multidrug transporter YP_008721809.1 1808360 D 1355100 CDS YP_008721810.1 556551665 17430602 complement(1809774..1811030) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1811030 17430602 P423_08895 Escherichia coli JJ1886 hypothetical protein YP_008721810.1 1809774 R 1355100 CDS YP_008721811.1 556551666 17430605 1811604..1811909 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; monooxygenase 1811909 17430605 P423_08910 Escherichia coli JJ1886 monooxygenase YP_008721811.1 1811604 D 1355100 CDS YP_008721812.1 556551667 17430606 1812035..1813639 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1813639 17430606 P423_08915 Escherichia coli JJ1886 hypothetical protein YP_008721812.1 1812035 D 1355100 CDS YP_008721813.1 556551668 17430607 complement(1813651..1814463) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1814463 17430607 P423_08920 Escherichia coli JJ1886 hypothetical protein YP_008721813.1 1813651 R 1355100 CDS YP_008721814.1 556551669 17430608 complement(1814467..1815252) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate reductase cytochrome B 1815252 17430608 P423_08925 Escherichia coli JJ1886 thiosulfate reductase cytochrome B YP_008721814.1 1814467 R 1355100 CDS YP_008721815.1 556551670 17430609 complement(1815249..1815968) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 1815968 17430609 P423_08930 Escherichia coli JJ1886 ferredoxin YP_008721815.1 1815249 R 1355100 CDS YP_008721816.1 556551671 17430610 complement(1815981..1816628) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1816628 17430610 P423_08935 Escherichia coli JJ1886 hypothetical protein YP_008721816.1 1815981 R 1355100 CDS YP_008721817.1 556551672 17430611 complement(1816632..1818734) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1818734 17430611 P423_08940 Escherichia coli JJ1886 oxidoreductase YP_008721817.1 1816632 R 1355100 CDS YP_008721818.1 556551673 17430612 complement(1818755..1819381) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1819381 17430612 P423_08945 Escherichia coli JJ1886 hypothetical protein YP_008721818.1 1818755 R 1355100 CDS YP_008721819.1 556551674 17430613 complement(1819837..1820046) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1820046 17430613 P423_08950 Escherichia coli JJ1886 hypothetical protein YP_008721819.1 1819837 R 1355100 CDS YP_008721820.1 556551675 17430614 1820603..1822015 1 NC_022648.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate kinase 1822015 17430614 P423_08955 Escherichia coli JJ1886 pyruvate kinase YP_008721820.1 1820603 D 1355100 CDS YP_008721821.1 556551676 17430615 1822326..1822562 1 NC_022648.1 major outer membrane lipoprotein; interacts with peptidoglycan to maintain the integrity of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein lipoprotein 1822562 17430615 P423_08960 Escherichia coli JJ1886 murein lipoprotein YP_008721821.1 1822326 D 1355100 CDS YP_008721822.1 556551677 17430616 complement(1822625..1823629) 1 NC_022648.1 catalyzes the formation of a meso-diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link in peptidoglycan synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein L,D-transpeptidase 1823629 17430616 P423_08965 Escherichia coli JJ1886 murein L,D-transpeptidase YP_008721822.1 1822625 R 1355100 CDS YP_008721823.1 556551678 17430617 complement(1823777..1824193) 1 NC_022648.1 Acts with SufS to catalyze the formation of L-alanine from L-cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desufuration protein SufE 1824193 17430617 P423_08970 Escherichia coli JJ1886 cysteine desufuration protein SufE YP_008721823.1 1823777 R 1355100 CDS YP_008721824.1 556551679 17430618 complement(1824206..1825426) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional cysteine desulfurase/selenocysteine lyase 1825426 17430618 P423_08975 Escherichia coli JJ1886 bifunctional cysteine desulfurase/selenocysteine lyase YP_008721824.1 1824206 R 1355100 CDS YP_008721825.1 556551680 17430619 complement(1825423..1826694) 1 NC_022648.1 with SufBC activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase activator complex subunit SufD 1826694 17430619 P423_08980 Escherichia coli JJ1886 cysteine desulfurase activator complex subunit SufD YP_008721825.1 1825423 R 1355100 CDS YP_008721826.1 556551681 17430620 complement(1826669..1827415) 1 NC_022648.1 part of SUF system involved in inserting iron-sulfur clusters into proteins; in Escherichia coli this protein forms a complex with SufBD; the SufBCD complex stimulates the cysteine desulfurase SufS in conjunction with SufE; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase 1827415 sufC 17430620 sufC Escherichia coli JJ1886 cysteine desulfurase YP_008721826.1 1826669 R 1355100 CDS YP_008721827.1 556551682 17430621 complement(1827425..1828912) 1 NC_022648.1 with SufCD activates cysteine desulfurase SufS; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase activator complex subunit SufB 1828912 17430621 P423_08990 Escherichia coli JJ1886 cysteine desulfurase activator complex subunit SufB YP_008721827.1 1827425 R 1355100 CDS YP_008721828.1 556551683 17430622 complement(1828921..1829289) 1 NC_022648.1 functions as a scaffold on which iron-sulfur clusters ([2Fe-2S]; [4Fe-4S]) are assembled; forms a homodimer; similar to IscA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster assembly scaffold protein 1829289 sufA 17430622 sufA Escherichia coli JJ1886 iron-sulfur cluster assembly scaffold protein YP_008721828.1 1828921 R 1355100 CDS YP_008721829.1 556554531 17430623 complement(1829838..1830107) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1830107 17430623 P423_09000 Escherichia coli JJ1886 hypothetical protein YP_008721829.1 1829838 R 1355100 CDS YP_008721830.1 556551684 17430624 complement(1830126..1830536) 1 NC_022648.1 required for efficient enterobactin production; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA esterase 1830536 17430624 P423_09005 Escherichia coli JJ1886 acyl-CoA esterase YP_008721830.1 1830126 R 1355100 CDS YP_008721831.1 556551685 17430625 complement(1830533..1833589) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1833589 17430625 P423_09010 Escherichia coli JJ1886 membrane protein YP_008721831.1 1830533 R 1355100 CDS YP_008721832.1 556551686 17430626 1833803..1834915 1 NC_022648.1 YdiK; inner membrane protein; ydiK promoter presents a PurR sequence, suggesting that its expression is purine-regulated; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1834915 17430626 P423_09015 Escherichia coli JJ1886 membrane protein YP_008721832.1 1833803 D 1355100 CDS YP_008721833.1 556551687 17430627 1835344..1835700 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1835700 17430627 P423_09020 Escherichia coli JJ1886 hypothetical protein YP_008721833.1 1835344 D 1355100 CDS YP_008721834.1 556551688 17430628 1835800..1837014 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1837014 17430628 P423_09025 Escherichia coli JJ1886 transporter YP_008721834.1 1835800 D 1355100 CDS YP_008721835.1 556551689 17430629 1837241..1838506 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1838506 17430629 P423_09030 Escherichia coli JJ1886 transporter YP_008721835.1 1837241 D 1355100 CDS YP_008721836.1 556551690 17430630 1838518..1839384 1 NC_022648.1 YdiB; quinate/shikimate dehydrogenase from Escherichia coli uses both NAD and NAD(P) to convert quinate and shikimate to 3-dehydroquinate and 3-dehydroshikimate; Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate 5-dehydrogenase 1839384 17430630 P423_09035 Escherichia coli JJ1886 shikimate 5-dehydrogenase YP_008721836.1 1838518 D 1355100 CDS YP_008721837.1 556551691 17430631 1839415..1840173 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-dehydroquinate dehydratase 1840173 17430631 P423_09040 Escherichia coli JJ1886 3-dehydroquinate dehydratase YP_008721837.1 1839415 D 1355100 CDS YP_008721838.1 556551692 17430632 1840320..1841915 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1841915 17430632 P423_09045 Escherichia coli JJ1886 hypothetical protein YP_008721838.1 1840320 D 1355100 CDS YP_008721839.1 556551693 17430633 1841929..1843080 1 NC_022648.1 may play a role in electron transport between the anaerobic fatty acid oxidation pathway and the respiratory chain; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl-CoA dehydrogenase 1843080 17430633 P423_09050 Escherichia coli JJ1886 acyl-CoA dehydrogenase YP_008721839.1 1841929 D 1355100 CDS YP_008721840.1 556551694 17430634 complement(1843123..1844034) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1844034 17430634 P423_09055 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008721840.1 1843123 R 1355100 CDS YP_008721841.1 556551695 17430635 1844350..1845114 1 NC_022648.1 required for anaerobic carnitine reduction, may act to transfer electrons to crotonobetaine reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein FixB 1845114 17430635 P423_09060 Escherichia coli JJ1886 electron transfer flavoprotein FixB YP_008721841.1 1844350 D 1355100 CDS YP_008721842.1 556551696 17430636 1845134..1846072 1 NC_022648.1 involved in electron transfer during carnitine metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein subunit alpha 1846072 fixB 17430636 fixB Escherichia coli JJ1886 electron transfer flavoprotein subunit alpha YP_008721842.1 1845134 D 1355100 CDS YP_008721843.1 556551697 17430637 1846127..1847416 1 NC_022648.1 FAD/NAD(P)-binding domain; possibly part of an electron transfer system required for anaerobic carnitine reduction; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase FixC 1847416 17430637 P423_09070 Escherichia coli JJ1886 oxidoreductase FixC YP_008721843.1 1846127 D 1355100 CDS YP_008721844.1 556551698 17430638 1847413..1847706 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin ydiT 1847706 17430638 P423_09075 Escherichia coli JJ1886 ferredoxin ydiT YP_008721844.1 1847413 D 1355100 CDS YP_008721845.1 556551699 17430639 1847709..1849409 1 NC_022648.1 acts in anaerobic beta-oxidation of fatty acids; possible ligase/synthase involved in anaerobic growth on fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; short chain acyl-CoA synthetase 1849409 17430639 P423_09080 Escherichia coli JJ1886 short chain acyl-CoA synthetase YP_008721845.1 1847709 D 1355100 CDS YP_008721846.1 556551700 17430640 complement(1849466..1851844) 1 NC_022648.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate synthase 1851844 17430640 P423_09085 Escherichia coli JJ1886 phosphoenolpyruvate synthase YP_008721846.1 1849466 R 1355100 CDS YP_008721847.1 556551701 17430641 1852177..1853010 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PEP synthetase regulatory protein 1853010 17430641 P423_09090 Escherichia coli JJ1886 PEP synthetase regulatory protein YP_008721847.1 1852177 D 1355100 CDS YP_008721848.1 556551702 17430642 1853167..1854213 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-2-dehydro-3-deoxyheptonate aldolase 1854213 17430642 P423_09095 Escherichia coli JJ1886 phospho-2-dehydro-3-deoxyheptonate aldolase YP_008721848.1 1853167 D 1355100 CDS YP_008721849.1 556551703 17430643 1854345..1854536 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1854536 17430643 P423_09100 Escherichia coli JJ1886 hypothetical protein YP_008721849.1 1854345 D 1355100 CDS YP_008721850.1 556551704 17430644 complement(1854540..1855976) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1855976 17430644 P423_09105 Escherichia coli JJ1886 hypothetical protein YP_008721850.1 1854540 R 1355100 CDS YP_008721851.1 556551705 17430645 complement(1857000..1857464) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 1857464 17430645 P423_09110 Escherichia coli JJ1886 endopeptidase YP_008721851.1 1857000 R 1355100 CDS YP_008721852.1 556551706 17430646 complement(1857542..1858291) 1 NC_022648.1 ATP-binding protein that acts with the transmembrane protein BtuC and the solute binding protein BtuF to transport vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vitamin B12-transporter ATPase 1858291 17430646 P423_09115 Escherichia coli JJ1886 vitamin B12-transporter ATPase YP_008721852.1 1857542 R 1355100 CDS YP_008721853.1 556551707 17430647 complement(1858291..1858842) 1 NC_022648.1 similar to glutathione peroxidase; member of the btuCED operon which is required for vitamin B12 transport across the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione peroxidase 1858842 btuE 17430647 btuE Escherichia coli JJ1886 glutathione peroxidase YP_008721853.1 1858291 R 1355100 CDS YP_008721854.1 556551708 17430648 complement(1858905..1859885) 1 NC_022648.1 with BtuD and BtuF transports vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vtamin B12-transporter permease 1859885 17430648 P423_09125 Escherichia coli JJ1886 vtamin B12-transporter permease YP_008721854.1 1858905 R 1355100 CDS YP_008721855.1 556551709 17430649 complement(1859986..1860285) 1 NC_022648.1 This protein is one of the two subunits of integration host factor, a specific DNA-binding protein that functions in genetic recombination as well as in transcriptional and translational control; Derived by automated computational analysis using gene prediction method: Protein Homology.; integration host factor subunit alpha 1860285 ihfA 17430649 ihfA Escherichia coli JJ1886 integration host factor subunit alpha YP_008721855.1 1859986 R 1355100 CDS YP_008721856.1 556551710 17430650 complement(1860290..1862677) 1 NC_022648.1 catalyzes a two-step reaction, first charging a phenylalanine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; forms a tetramer of alpha(2)beta(2); binds two magnesium ions per tetramer; type 2 subfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylalanyl-tRNA synthetase 1862677 pheT 17430650 pheT Escherichia coli JJ1886 phenylalanyl-tRNA synthetase YP_008721856.1 1860290 R 1355100 CDS YP_008721857.1 556551711 17430651 complement(1862692..1863675) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylalanyl-tRNA synthetase 1863675 17430651 P423_09140 Escherichia coli JJ1886 phenylalanyl-tRNA synthetase YP_008721857.1 1862692 R 1355100 CDS YP_008721858.1 556554532 17430652 complement(1863789..1863884) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1863884 17430652 P423_09145 Escherichia coli JJ1886 hypothetical protein YP_008721858.1 1863789 R 1355100 CDS YP_008721859.1 556551712 17430653 complement(1864126..1864482) 1 NC_022648.1 binds directly to 23S ribosomal RNA prior to in vitro assembly of the 50S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L20 1864482 rplT 17430653 rplT Escherichia coli JJ1886 50S ribosomal protein L20 YP_008721859.1 1864126 R 1355100 CDS YP_008721860.1 556551713 17430654 complement(1864535..1864732) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L35 1864732 17430654 P423_09155 Escherichia coli JJ1886 50S ribosomal protein L35 YP_008721860.1 1864535 R 1355100 CDS YP_008721861.1 556554533 17430655 complement(1864829..1865263) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; translation initiation factor IF-3 1865263 17430655 P423_09160 Escherichia coli JJ1886 translation initiation factor IF-3 YP_008721861.1 1864829 R 1355100 CDS YP_008721862.1 556551714 17430656 complement(1865375..1867303) 1 NC_022648.1 catalyzes a two-step reaction, first charging a threonine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; catalyzes the formation of threonyl-tRNA(Thr) from threonine and tRNA(Thr); Derived by automated computational analysis using gene prediction method: Protein Homology.; threonyl-tRNA synthetase 1867303 thrS 17430656 thrS Escherichia coli JJ1886 threonyl-tRNA synthetase YP_008721862.1 1865375 R 1355100 CDS YP_008721863.1 556554534 17430657 1869022..1869129 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1869129 17430657 P423_09170 Escherichia coli JJ1886 hypothetical protein YP_008721863.1 1869022 D 1355100 CDS YP_008721864.1 556551715 17430658 complement(1869182..1869940) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1869940 17430658 P423_09175 Escherichia coli JJ1886 membrane protein YP_008721864.1 1869182 R 1355100 CDS YP_008721865.1 556551716 17430659 1870226..1871155 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphofructokinase 1871155 17430659 P423_09180 Escherichia coli JJ1886 6-phosphofructokinase YP_008721865.1 1870226 D 1355100 CDS YP_008721866.1 556551717 17430660 1871256..1871546 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1871546 17430660 P423_09185 Escherichia coli JJ1886 hypothetical protein YP_008721866.1 1871256 D 1355100 CDS YP_008721867.1 556551718 17430661 1871652..1872512 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1872512 17430661 P423_09190 Escherichia coli JJ1886 hypothetical protein YP_008721867.1 1871652 D 1355100 CDS YP_008721868.1 556551719 17430662 complement(1872553..1873089) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1873089 17430662 P423_09195 Escherichia coli JJ1886 membrane protein YP_008721868.1 1872553 R 1355100 CDS YP_008721869.1 556551720 17430663 1873236..1873904 1 NC_022648.1 YniC; catalyzes the dephosphorylation of 2-deoxyglucose 6-phosphate, mannose 6-phosphate and p-nitrophenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-deoxyglucose-6-phosphatase 1873904 17430663 P423_09200 Escherichia coli JJ1886 2-deoxyglucose-6-phosphatase YP_008721869.1 1873236 D 1355100 CDS YP_008721870.1 556551721 17430664 1874068..1874658 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1874658 17430664 P423_09205 Escherichia coli JJ1886 membrane protein YP_008721870.1 1874068 D 1355100 CDS YP_008721871.1 556551722 17430665 1874791..1876182 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-cystine transporter tcyP 1876182 17430665 P423_09210 Escherichia coli JJ1886 L-cystine transporter tcyP YP_008721871.1 1874791 D 1355100 CDS YP_008721872.1 556551723 17430666 complement(1876229..1876471) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division modulator 1876471 17430666 P423_09215 Escherichia coli JJ1886 cell division modulator YP_008721872.1 1876229 R 1355100 CDS YP_008721873.1 556551724 17430667 1876675..1878936 1 NC_022648.1 Catalase HPII; monofunctional catalase that decomposes hydrogen peroxide into water and oxygen; serves to protect cells from the toxic effects of hydrogen peroxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroperoxidase II 1878936 katE 17430667 katE Escherichia coli JJ1886 hydroperoxidase II YP_008721873.1 1876675 D 1355100 CDS YP_008721874.1 556551725 17430668 complement(1878983..1879741) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1879741 17430668 P423_09225 Escherichia coli JJ1886 hypothetical protein YP_008721874.1 1878983 R 1355100 CDS YP_008721875.1 556551726 17430669 complement(1879754..1881106) 1 NC_022648.1 catalyzes the fromation of N-acetyl-D-glucosamine and N-acetyl-D-glucosamine-6-phosphate from diacetylchitobiose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diacetylchitobiose-6-phosphate hydrolase 1881106 17430669 P423_09230 Escherichia coli JJ1886 diacetylchitobiose-6-phosphate hydrolase YP_008721875.1 1879754 R 1355100 CDS YP_008721876.1 556551727 17430670 complement(1881209..1882051) 1 NC_022648.1 represses the celABCDF-ydjC operon involved in carbon uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1882051 17430670 P423_09235 Escherichia coli JJ1886 transcriptional regulator YP_008721876.1 1881209 R 1355100 CDS YP_008721877.1 556551728 17430671 complement(1882059..1882409) 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIA 1882409 17430671 P423_09240 Escherichia coli JJ1886 PTS N'-diacetylchitobiose transporter subunit IIA YP_008721877.1 1882059 R 1355100 CDS YP_008721878.1 556551729 17430672 complement(1882460..1883818) 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIC 1883818 17430672 P423_09245 Escherichia coli JJ1886 PTS N'-diacetylchitobiose transporter subunit IIC YP_008721878.1 1882460 R 1355100 CDS YP_008721879.1 556551730 17430673 complement(1883903..1884223) 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; involved in N,N'-diacetylchitobiose transport; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N'-diacetylchitobiose transporter subunit IIB 1884223 17430673 P423_09250 Escherichia coli JJ1886 PTS N'-diacetylchitobiose transporter subunit IIB YP_008721879.1 1883903 R 1355100 CDS YP_008721880.1 556551731 17430674 complement(1884522..1884860) 1 NC_022648.1 osmotically-inducible lipoprotein E; activator of ntr-like gene protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1884860 17430674 P423_09255 Escherichia coli JJ1886 transcriptional regulator YP_008721880.1 1884522 R 1355100 CDS YP_008721881.1 556551732 17430675 1885062..1885889 1 NC_022648.1 catalyzes the formation of nicotinamide adenine dinucleotide (NAD) from nicotinic acid adenine dinucleotide (NAAD) using either ammonia or glutamine as the amide donor and ATP; ammonia-utilizing enzymes include the ones from Bacillus and Escherichia coli while glutamine-utilizing enzymes include the Mycobacterial one; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD synthetase 1885889 nadE 17430675 nadE Escherichia coli JJ1886 NAD synthetase YP_008721881.1 1885062 D 1355100 CDS YP_008721882.1 556551733 17430677 1886119..1887006 1 NC_022648.1 3' incision activity; acts with UvrC; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotide excision repair endonuclease 1887006 17430677 P423_09270 Escherichia coli JJ1886 nucleotide excision repair endonuclease YP_008721882.1 1886119 D 1355100 CDS YP_008721883.1 556551734 17430678 complement(1886966..1887541) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1887541 17430678 P423_09275 Escherichia coli JJ1886 hypothetical protein YP_008721883.1 1886966 R 1355100 CDS YP_008721884.1 556551735 17430679 complement(1887744..1888229) 1 NC_022648.1 periplasmic protein induced by stress response via Cpx and BaeSR system; similar to CpxP; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1888229 17430679 P423_09280 Escherichia coli JJ1886 hypothetical protein YP_008721884.1 1887744 R 1355100 CDS YP_008721885.1 556551736 17430680 complement(1888559..1889527) 1 NC_022648.1 catalyzes the formation of succinate and glutamate from N(2)-succinylglutamate in arginine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinylglutamate desuccinylase 1889527 17430680 P423_09285 Escherichia coli JJ1886 succinylglutamate desuccinylase YP_008721885.1 1888559 R 1355100 CDS YP_008721886.1 556551737 17430681 complement(1889520..1890863) 1 NC_022648.1 catalyzes the hydrolysis of 2-N-succinylarginine into 2-N-succinylornithine, ammonia and carbon dioxide in arginine degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinylarginine dihydrolase 1890863 17430681 P423_09290 Escherichia coli JJ1886 succinylarginine dihydrolase YP_008721886.1 1889520 R 1355100 CDS YP_008721887.1 556551738 17430682 complement(1890860..1892338) 1 NC_022648.1 a high throughput screen identified this enzyme as an aldehyde dehydrogenase with broad substrate specificity; converts succinylglutamate semialdehyde and NAD to succinylglutamate and NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinylglutamate-semialdehyde dehydrogenase 1892338 astD 17430682 astD Escherichia coli JJ1886 succinylglutamate-semialdehyde dehydrogenase YP_008721887.1 1890860 R 1355100 CDS YP_008721888.1 556551739 17430683 complement(1892335..1893369) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine succinyltransferase 1893369 17430683 P423_09300 Escherichia coli JJ1886 arginine succinyltransferase YP_008721888.1 1892335 R 1355100 CDS YP_008721889.1 556551740 17430684 complement(1893366..1894586) 1 NC_022648.1 catalyzes the transamination of 2-N-succinylornithine and alpha-ketoglutarate into 2-N-succinylglutamate semialdehyde and glutamate; also functions as the catabolic acetylornithine aminotransferase catalyzing the formation of 2-N-acetylglutamate semialdehyde and glutamate from 2-N-acetylornithine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetylornithine aminotransferase 1894586 17430684 P423_09305 Escherichia coli JJ1886 acetylornithine aminotransferase YP_008721889.1 1893366 R 1355100 CDS YP_008721890.1 556551741 17430685 1895032..1895838 1 NC_022648.1 removes the damaged DNA at cytosines and guanines by cleaving on the 3' side of the AP site by a beta-elimination reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease III 1895838 17430685 P423_09315 Escherichia coli JJ1886 exonuclease III YP_008721890.1 1895032 D 1355100 CDS YP_008721891.1 556551742 17430686 1896005..1896715 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1896715 17430686 P423_09320 Escherichia coli JJ1886 membrane protein YP_008721891.1 1896005 D 1355100 CDS YP_008721892.1 556551743 17430687 1896720..1897397 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1897397 17430687 P423_09325 Escherichia coli JJ1886 hypothetical protein YP_008721892.1 1896720 D 1355100 CDS YP_008721893.1 556551744 17430688 1897411..1898118 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TVP38/TMEM64 family inner membrane protein ydjZ 1898118 17430688 P423_09330 Escherichia coli JJ1886 TVP38/TMEM64 family inner membrane protein ydjZ YP_008721893.1 1897411 D 1355100 CDS YP_008721894.1 556551745 17430689 1898118..1898666 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1898666 17430689 P423_09335 Escherichia coli JJ1886 hypothetical protein YP_008721894.1 1898118 D 1355100 CDS YP_008721895.1 556551746 17430690 1898676..1899842 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1899842 17430690 P423_09340 Escherichia coli JJ1886 hypothetical protein YP_008721895.1 1898676 D 1355100 CDS YP_008721896.1 556551747 17430691 1899815..1901350 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine ABC transporter permease 1901350 17430691 P423_09345 Escherichia coli JJ1886 thiamine ABC transporter permease YP_008721896.1 1899815 D 1355100 CDS YP_008721897.1 556554535 17430692 1901350..1902003 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfate ABC transporter ATP-binding protein 1902003 17430692 P423_09350 Escherichia coli JJ1886 sulfate ABC transporter ATP-binding protein YP_008721897.1 1901350 D 1355100 CDS YP_008721898.1 556551748 17430693 1902070..1903377 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate sulfurtransferase 1903377 17430693 P423_09355 Escherichia coli JJ1886 thiosulfate sulfurtransferase YP_008721898.1 1902070 D 1355100 CDS YP_008721899.1 556551749 17430694 complement(1903386..1904006) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1904006 17430694 P423_09360 Escherichia coli JJ1886 membrane protein YP_008721899.1 1903386 R 1355100 CDS YP_008721900.1 556551750 17430695 1904093..1904500 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase 1904500 17430695 P423_09365 Escherichia coli JJ1886 pyrimidine (deoxy)nucleoside triphosphate pyrophosphohydrolase YP_008721900.1 1904093 D 1355100 CDS YP_008721901.1 556551751 17430696 complement(1904466..1904738) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1904738 17430696 P423_09370 Escherichia coli JJ1886 hypothetical protein YP_008721901.1 1904466 R 1355100 CDS YP_008721902.1 556551752 17430697 1904974..1906317 1 NC_022648.1 converts 2-oxoglutarate to glutamate; in Escherichia coli this enzyme plays a role in glutamate synthesis when the cell is under energy restriction; uses NADPH; forms a homohexamer; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate dehydrogenase 1906317 17430697 P423_09375 Escherichia coli JJ1886 glutamate dehydrogenase YP_008721902.1 1904974 D 1355100 CDS YP_008721903.1 556551753 17430698 complement(1906394..1908349) 1 NC_022648.1 decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase III 1908349 17430698 P423_09380 Escherichia coli JJ1886 DNA topoisomerase III YP_008721903.1 1906394 R 1355100 CDS YP_008721904.1 556551754 17430699 complement(1908354..1909397) 1 NC_022648.1 catalyzes the formation of selenophosphate from selenide and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; selenophosphate synthetase 1909397 17430699 P423_09385 Escherichia coli JJ1886 selenophosphate synthetase YP_008721904.1 1908354 R 1355100 CDS YP_008721905.1 556551755 17430700 complement(1909514..1910065) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1910065 17430700 P423_09390 Escherichia coli JJ1886 oxidoreductase YP_008721905.1 1909514 R 1355100 CDS YP_008721906.1 556551756 17430701 1910226..1912082 1 NC_022648.1 SppA; catalyzes the degradation of cleaved signal peptides; essential to maintain secretion of mature proteins across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 1912082 17430701 P423_09395 Escherichia coli JJ1886 protease YP_008721906.1 1910226 D 1355100 CDS YP_008721907.1 556554536 17430702 1912198..1912908 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1912908 17430702 P423_09400 Escherichia coli JJ1886 hypothetical protein YP_008721907.1 1912198 D 1355100 CDS YP_008721908.1 556551757 17430703 1913040..1914056 1 NC_022648.1 converts asparagine to aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoplasmic asparaginase I 1914056 ansA 17430703 ansA Escherichia coli JJ1886 cytoplasmic asparaginase I YP_008721908.1 1913040 D 1355100 CDS YP_008721909.1 556551758 17430704 1914067..1914708 1 NC_022648.1 catalyzes the formation of nicotinate from nicotinamide in NAD biosynthesis and the formation of pyrazinoate from pyrazinamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinamidase/pyrazinamidase 1914708 17430704 P423_09410 Escherichia coli JJ1886 nicotinamidase/pyrazinamidase YP_008721909.1 1914067 D 1355100 CDS YP_008721910.1 556551759 17430705 complement(1914801..1916159) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 1916159 17430705 P423_09415 Escherichia coli JJ1886 MFS transporter YP_008721910.1 1914801 R 1355100 CDS YP_008721911.1 556551760 17430706 complement(1916277..1917035) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 1917035 17430706 P423_09420 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008721911.1 1916277 R 1355100 CDS YP_008721912.1 556551761 17430707 complement(1917172..1918152) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 1918152 17430707 P423_09425 Escherichia coli JJ1886 oxidoreductase YP_008721912.1 1917172 R 1355100 CDS YP_008721913.1 556551762 17430708 complement(1918162..1919109) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 1919109 17430708 P423_09430 Escherichia coli JJ1886 sugar kinase YP_008721913.1 1918162 R 1355100 CDS YP_008721914.1 556551763 17430709 complement(1919114..1919950) 1 NC_022648.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 1919950 gatY 17430709 gatY Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008721914.1 1919114 R 1355100 CDS YP_008721915.1 556551764 17430710 complement(1919971..1921014) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 1921014 17430710 P423_09440 Escherichia coli JJ1886 alcohol dehydrogenase YP_008721915.1 1919971 R 1355100 CDS YP_008721916.1 556551765 17430711 complement(1921031..1922410) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 1922410 17430711 P423_09445 Escherichia coli JJ1886 transporter YP_008721916.1 1921031 R 1355100 CDS YP_008721917.1 556551766 17430712 complement(1922437..1923513) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 1923513 17430712 P423_09450 Escherichia coli JJ1886 alcohol dehydrogenase YP_008721917.1 1922437 R 1355100 CDS YP_008721918.1 556551767 17430713 complement(1923883..1924155) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1924155 17430713 P423_09455 Escherichia coli JJ1886 hypothetical protein YP_008721918.1 1923883 R 1355100 CDS YP_008721919.1 556551768 17430714 complement(1924197..1924610) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine sulfoxide reductase B 1924610 17430714 P423_09460 Escherichia coli JJ1886 methionine sulfoxide reductase B YP_008721919.1 1924197 R 1355100 CDS YP_008721920.1 556551769 17430715 1924952..1925947 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glyceraldehyde-3-phosphate dehydrogenase 1925947 17430715 P423_09465 Escherichia coli JJ1886 glyceraldehyde-3-phosphate dehydrogenase YP_008721920.1 1924952 D 1355100 CDS YP_008721921.1 556551770 17430716 1926031..1926915 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate 1-epimerase 1926915 17430716 P423_09470 Escherichia coli JJ1886 glucose-6-phosphate 1-epimerase YP_008721921.1 1926031 D 1355100 CDS YP_008721922.1 556551771 17430717 complement(1926966..1927820) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1927820 17430717 P423_09475 Escherichia coli JJ1886 hypothetical protein YP_008721922.1 1926966 R 1355100 CDS YP_008721923.1 556551772 17430718 complement(1927910..1928656) 1 NC_022648.1 scaffolding protein for the murein polymerase MrcB and the lytic transglycosylase MltA; Derived by automated computational analysis using gene prediction method: Protein Homology.; MltA-interacting protein MipA 1928656 17430718 P423_09480 Escherichia coli JJ1886 MltA-interacting protein MipA YP_008721923.1 1927910 R 1355100 CDS YP_008721924.1 556551773 17430719 1929092..1931026 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PrkA family serine protein kinase 1931026 17430719 P423_09485 Escherichia coli JJ1886 PrkA family serine protein kinase YP_008721924.1 1929092 D 1355100 CDS YP_008721925.1 556551774 17430720 1931139..1932422 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1932422 17430720 P423_09490 Escherichia coli JJ1886 hypothetical protein YP_008721925.1 1931139 D 1355100 CDS YP_008721926.1 556551775 17430721 1932569..1934044 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1934044 17430721 P423_09495 Escherichia coli JJ1886 membrane protein YP_008721926.1 1932569 D 1355100 CDS YP_008721927.1 556551776 17430722 1934225..1935715 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cylase 1935715 17430722 P423_09500 Escherichia coli JJ1886 diguanylate cylase YP_008721927.1 1934225 D 1355100 CDS YP_008721928.1 556551777 17430723 1935758..1936261 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1936261 17430723 P423_09505 Escherichia coli JJ1886 hypothetical protein YP_008721928.1 1935758 D 1355100 CDS YP_008721929.1 556554537 17430724 complement(1936262..1936366) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1936366 17430724 P423_09510 Escherichia coli JJ1886 hypothetical protein YP_008721929.1 1936262 R 1355100 CDS YP_008721930.1 556551778 17430725 1936536..1936982 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1936982 17430725 P423_09515 Escherichia coli JJ1886 membrane protein YP_008721930.1 1936536 D 1355100 CDS YP_008721931.1 556551779 17430726 complement(1936939..1937760) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 1937760 17430726 P423_09520 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008721931.1 1936939 R 1355100 CDS YP_008721932.1 556551780 17430727 1937857..1939038 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1939038 17430727 P423_09525 Escherichia coli JJ1886 membrane protein YP_008721932.1 1937857 D 1355100 CDS YP_008721933.1 556551781 17430728 1939093..1939440 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1939440 17430728 P423_09530 Escherichia coli JJ1886 hypothetical protein YP_008721933.1 1939093 D 1355100 CDS YP_008721934.1 556551782 17430729 complement(1939462..1939716) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1939716 17430729 P423_09535 Escherichia coli JJ1886 hypothetical protein YP_008721934.1 1939462 R 1355100 CDS YP_008721935.1 556551783 17430730 1939899..1940924 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 1940924 17430730 P423_09540 Escherichia coli JJ1886 diguanylate cyclase YP_008721935.1 1939899 D 1355100 CDS YP_008721936.1 556551784 17430731 complement(1941191..1941439) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1941439 17430731 P423_09545 Escherichia coli JJ1886 membrane protein YP_008721936.1 1941191 R 1355100 CDS YP_008721937.1 556551785 17430732 complement(1941587..1941769) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1941769 17430732 P423_09550 Escherichia coli JJ1886 hypothetical protein YP_008721937.1 1941587 R 1355100 CDS YP_008721938.1 556551786 17430733 complement(1941773..1942132) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1942132 17430733 P423_09555 Escherichia coli JJ1886 hypothetical protein YP_008721938.1 1941773 R 1355100 CDS YP_008721939.1 556551787 17430734 complement(1942305..1942943) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine export protein LeuE 1942943 17430734 P423_09560 Escherichia coli JJ1886 leucine export protein LeuE YP_008721939.1 1942305 R 1355100 CDS YP_008721940.1 556554538 17430735 1943226..1943396 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dehydrogenase 1943396 17430735 P423_09565 Escherichia coli JJ1886 dehydrogenase YP_008721940.1 1943226 D 1355100 CDS YP_008721941.1 556551788 17430736 complement(1943486..1944613) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease D 1944613 17430736 P423_09570 Escherichia coli JJ1886 ribonuclease D YP_008721941.1 1943486 R 1355100 CDS YP_008721942.1 556551789 17430737 complement(1944683..1946368) 1 NC_022648.1 Activates fatty acids by binding to coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology.; long-chain fatty acid--CoA ligase 1946368 17430737 P423_09575 Escherichia coli JJ1886 long-chain fatty acid--CoA ligase YP_008721942.1 1944683 R 1355100 CDS YP_008721943.1 556551790 17430738 complement(1946573..1947154) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1947154 17430738 P423_09580 Escherichia coli JJ1886 membrane protein YP_008721943.1 1946573 R 1355100 CDS YP_008721944.1 556551791 17430739 complement(1947194..1947889) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1947889 17430739 P423_09585 Escherichia coli JJ1886 hypothetical protein YP_008721944.1 1947194 R 1355100 CDS YP_008721945.1 556551792 17430740 complement(1947947..1949857) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent helicase 1949857 17430740 P423_09590 Escherichia coli JJ1886 ATP-dependent helicase YP_008721945.1 1947947 R 1355100 CDS YP_008721946.1 556551793 17430741 1949989..1950333 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease L-PSP 1950333 17430741 P423_09595 Escherichia coli JJ1886 endoribonuclease L-PSP YP_008721946.1 1949989 D 1355100 CDS YP_008721947.1 556554539 17430742 1950755..1951054 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1951054 17430742 P423_09600 Escherichia coli JJ1886 hypothetical protein YP_008721947.1 1950755 D 1355100 CDS YP_008721948.1 556551794 17430743 complement(1951174..1951353) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1951353 17430743 P423_09605 Escherichia coli JJ1886 hypothetical protein YP_008721948.1 1951174 R 1355100 CDS YP_008721949.1 556551795 17430744 1951427..1952788 1 NC_022648.1 para-aminobenzoate synthase component 1; catalyzes the formation of 4-amino-4-deoxychorismate from chorismate and L-glutamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminodeoxychorismate synthase subunit I 1952788 pabB 17430744 pabB Escherichia coli JJ1886 aminodeoxychorismate synthase subunit I YP_008721949.1 1951427 D 1355100 CDS YP_008721950.1 556551796 17430745 1952792..1953370 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NUDIX hydrolase 1953370 17430745 P423_09615 Escherichia coli JJ1886 NUDIX hydrolase YP_008721950.1 1952792 D 1355100 CDS YP_008721951.1 556551797 17430746 1953554..1954918 1 NC_022648.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-serine dehydratase 1954918 17430746 P423_09620 Escherichia coli JJ1886 L-serine dehydratase YP_008721951.1 1953554 D 1355100 CDS YP_008721952.1 556551798 17430747 1955049..1956647 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 1956647 17430747 P423_09625 Escherichia coli JJ1886 cyclic di-GMP phosphodiesterase YP_008721952.1 1955049 D 1355100 CDS YP_008721953.1 556551799 17430748 complement(1956651..1958207) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1958207 17430748 P423_09630 Escherichia coli JJ1886 membrane protein YP_008721953.1 1956651 R 1355100 CDS YP_008721954.1 556551800 17430749 1958671..1959642 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IIAB 1959642 17430749 P423_09635 Escherichia coli JJ1886 PTS mannose transporter subunit IIAB YP_008721954.1 1958671 D 1355100 CDS YP_008721955.1 556551801 17430750 1959705..1960505 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IIC 1960505 17430750 P423_09640 Escherichia coli JJ1886 PTS mannose transporter subunit IIC YP_008721955.1 1959705 D 1355100 CDS YP_008721956.1 556551802 17430751 1960518..1961369 1 NC_022648.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IID 1961369 17430751 P423_09645 Escherichia coli JJ1886 PTS mannose transporter subunit IID YP_008721956.1 1960518 D 1355100 CDS YP_008721957.1 556551803 17430752 1961424..1961882 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1961882 17430752 P423_09650 Escherichia coli JJ1886 membrane protein YP_008721957.1 1961424 D 1355100 CDS YP_008721958.1 556551804 17430753 1962311..1962877 1 NC_022648.1 membrane protein YebN; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1962877 17430753 P423_09655 Escherichia coli JJ1886 membrane protein YP_008721958.1 1962311 D 1355100 CDS YP_008721959.1 556551805 17430754 complement(1962874..1963683) 1 NC_022648.1 methylates the guanosine in position 745 of 23S rRNA; required for translation and cell growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 1963683 rrmA 17430754 rrmA Escherichia coli JJ1886 23S rRNA methyltransferase YP_008721959.1 1962874 R 1355100 CDS YP_008721960.1 556551806 17430755 complement(1963849..1964058) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA chaperone/anti-terminator 1964058 17430755 P423_09665 Escherichia coli JJ1886 RNA chaperone/anti-terminator YP_008721960.1 1963849 R 1355100 CDS YP_008721961.1 556551807 17430756 complement(1964071..1964214) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1964214 17430756 P423_09670 Escherichia coli JJ1886 hypothetical protein YP_008721961.1 1964071 R 1355100 CDS YP_008721962.1 556551808 17430757 complement(1964884..1965171) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1965171 17430757 P423_09675 Escherichia coli JJ1886 hypothetical protein YP_008721962.1 1964884 R 1355100 CDS YP_008721963.1 556551809 17430758 complement(1965246..1965389) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PhoPQ regulatory protein 1965389 17430758 P423_09680 Escherichia coli JJ1886 PhoPQ regulatory protein YP_008721963.1 1965246 R 1355100 CDS YP_008721964.1 556554540 17430759 1965548..1965787 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1965787 17430759 P423_09685 Escherichia coli JJ1886 hypothetical protein YP_008721964.1 1965548 D 1355100 CDS YP_008721965.1 556551810 17430760 complement(1965931..1966722) 1 NC_022648.1 regulates the genes involved in 2-keto-3-deoxy gluconate transport and catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1966722 17430760 P423_09690 Escherichia coli JJ1886 transcriptional regulator YP_008721965.1 1965931 R 1355100 CDS YP_008721966.1 556551811 17430761 1966899..1968272 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug MFS transporter 1968272 17430761 P423_09695 Escherichia coli JJ1886 multidrug MFS transporter YP_008721966.1 1966899 D 1355100 CDS YP_008721967.1 556551812 17430762 complement(1968318..1969199) 1 NC_022648.1 metalloprotease; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein HtpX 1969199 17430762 P423_09700 Escherichia coli JJ1886 heat shock protein HtpX YP_008721967.1 1968318 R 1355100 CDS YP_008721968.1 556551813 17430763 complement(1969391..1971439) 1 NC_022648.1 Involved in the cleavage of a C-terminal peptide of 11 residues from the precursor form of penicillin-binding protein 3; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxy-terminal protease 1971439 17430763 P423_09705 Escherichia coli JJ1886 carboxy-terminal protease YP_008721968.1 1969391 R 1355100 CDS YP_008721969.1 556551814 17430764 complement(1971459..1972157) 1 NC_022648.1 affects solute and DNA transport through an unknown mechanism; Derived by automated computational analysis using gene prediction method: Protein Homology.; prop expression regulator 1972157 17430764 P423_09710 Escherichia coli JJ1886 prop expression regulator YP_008721969.1 1971459 R 1355100 CDS YP_008721970.1 556551815 17430765 complement(1972254..1972751) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Free methionine-R-sulfoxide reductase 1972751 17430765 P423_09715 Escherichia coli JJ1886 Free methionine-R-sulfoxide reductase YP_008721970.1 1972254 R 1355100 CDS YP_008721971.1 556551816 17430766 1972881..1974164 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1974164 17430766 P423_09720 Escherichia coli JJ1886 membrane protein YP_008721971.1 1972881 D 1355100 CDS YP_008721972.1 556551817 17430767 1974133..1976766 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1976766 17430767 P423_09725 Escherichia coli JJ1886 hypothetical protein YP_008721972.1 1974133 D 1355100 CDS YP_008721973.1 556551818 17430768 1976840..1978285 1 NC_022648.1 in Escherichia coli this enzyme specifically methylates C1407 of the 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA methyltransferase 1978285 yebU 17430768 yebU Escherichia coli JJ1886 rRNA methyltransferase YP_008721973.1 1976840 D 1355100 CDS YP_008721974.1 556551819 17430769 1978402..1978638 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1978638 17430769 P423_09735 Escherichia coli JJ1886 hypothetical protein YP_008721974.1 1978402 D 1355100 CDS YP_008721975.1 556554541 17430770 1978659..1978934 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1978934 17430770 P423_09740 Escherichia coli JJ1886 hypothetical protein YP_008721975.1 1978659 D 1355100 CDS YP_008721976.1 556551820 17430771 complement(1978935..1979591) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine protein phosphatase 1979591 17430771 P423_09745 Escherichia coli JJ1886 serine/threonine protein phosphatase YP_008721976.1 1978935 R 1355100 CDS YP_008721977.1 556554542 17430772 complement(1979816..1979968) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1979968 17430772 P423_09750 Escherichia coli JJ1886 hypothetical protein YP_008721977.1 1979816 R 1355100 CDS YP_008721978.1 556551821 17430773 complement(1979986..1980327) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1980327 17430773 P423_09755 Escherichia coli JJ1886 hypothetical protein YP_008721978.1 1979986 R 1355100 CDS YP_008721979.1 556551822 17430774 complement(1980340..1981212) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1981212 17430774 P423_09760 Escherichia coli JJ1886 membrane protein YP_008721979.1 1980340 R 1355100 CDS YP_008721980.1 556551823 17430775 complement(1981216..1981590) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1981590 17430775 P423_09765 Escherichia coli JJ1886 hypothetical protein YP_008721980.1 1981216 R 1355100 CDS YP_008721981.1 556551824 17430776 1981729..1981959 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit theta 1981959 17430776 P423_09770 Escherichia coli JJ1886 DNA polymerase III subunit theta YP_008721981.1 1981729 D 1355100 CDS YP_008721982.1 556551825 17430777 1982061..1982717 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1982717 17430777 P423_09775 Escherichia coli JJ1886 hypothetical protein YP_008721982.1 1982061 D 1355100 CDS YP_008721983.1 556551826 17430778 1982741..1983403 1 NC_022648.1 3'-5' exonuclease activity on single or double-strand DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease X 1983403 17430778 P423_09780 Escherichia coli JJ1886 exodeoxyribonuclease X YP_008721983.1 1982741 D 1355100 CDS YP_008721984.1 556551827 17430779 complement(1983400..1985460) 1 NC_022648.1 PtrB; oligopeptidase that cleaves peptide bonds following arginine and lysine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 1985460 17430779 P423_09785 Escherichia coli JJ1886 protease YP_008721984.1 1983400 R 1355100 CDS YP_008721985.1 556551828 17430780 complement(1985669..1986328) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 1986328 17430780 P423_09790 Escherichia coli JJ1886 membrane protein YP_008721985.1 1985669 R 1355100 CDS YP_008721986.1 556554543 17430781 1986388..1986498 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1986498 17430781 P423_09795 Escherichia coli JJ1886 hypothetical protein YP_008721986.1 1986388 D 1355100 CDS YP_008721987.1 556551829 17430782 complement(1986655..1987011) 1 NC_022648.1 secreted protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 1987011 17430782 P423_09800 Escherichia coli JJ1886 hypothetical protein YP_008721987.1 1986655 R 1355100 CDS YP_008721988.1 556551830 17430783 complement(1987078..1987368) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA damage-inducible protein YebG 1987368 17430783 P423_09805 Escherichia coli JJ1886 DNA damage-inducible protein YebG YP_008721988.1 1987078 R 1355100 CDS YP_008721989.1 556551831 17430784 1987502..1988680 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylglycinamide formyltransferase 1988680 17430784 P423_09810 Escherichia coli JJ1886 phosphoribosylglycinamide formyltransferase YP_008721989.1 1987502 D 1355100 CDS YP_008721990.1 556551832 17430785 complement(1988736..1989377) 1 NC_022648.1 catalyzes the formation of pyruvate and glyoxylate from 4-hydroxy-2-oxoglutarate; or pyruvate and D-glyceraldehyde 3-phosphate from 2-dehydro-3-deoxy-D-glyconate 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ketohydroxyglutarate aldolase 1989377 17430785 P423_09815 Escherichia coli JJ1886 ketohydroxyglutarate aldolase YP_008721990.1 1988736 R 1355100 CDS YP_008721991.1 556551833 17430786 complement(1989414..1991225) 1 NC_022648.1 catalyzes the formation of 2-dehydro-3-deoxy-6-phospho-D-gluconate from 6-phospho-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphogluconate dehydratase 1991225 17430786 P423_09820 Escherichia coli JJ1886 phosphogluconate dehydratase YP_008721991.1 1989414 R 1355100 CDS YP_008721992.1 556551834 17430787 complement(1991460..1992935) 1 NC_022648.1 catalyzes the formation of D-glucono-1,5-lactone 6-phosphate from D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate 1-dehydrogenase 1992935 17430787 P423_09825 Escherichia coli JJ1886 glucose-6-phosphate 1-dehydrogenase YP_008721992.1 1991460 R 1355100 CDS YP_008721993.1 556554544 17430788 complement(1993101..1993250) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1993250 17430788 P423_09830 Escherichia coli JJ1886 hypothetical protein YP_008721993.1 1993101 R 1355100 CDS YP_008721994.1 556551835 17430789 1993273..1994142 1 NC_022648.1 Represses the expression of the zwf, eda, glp and gap; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 1994142 17430789 P423_09835 Escherichia coli JJ1886 transcriptional regulator YP_008721994.1 1993273 D 1355100 CDS YP_008721995.1 556551836 17430790 1994270..1995712 1 NC_022648.1 catalyzes the formation of phosphoenolpyruvate from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate kinase 1995712 17430790 P423_09840 Escherichia coli JJ1886 pyruvate kinase YP_008721995.1 1994270 D 1355100 CDS YP_008721996.1 556551837 17430791 complement(1995844..1996815) 1 NC_022648.1 Transfers myristate or laurate, activated on ACP, to the lipid IVA moiety of (KDO)2-(lauroyl)-lipid IVA; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase 1996815 17430791 P423_09845 Escherichia coli JJ1886 lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase YP_008721996.1 1995844 R 1355100 CDS YP_008721997.1 556551838 17430792 complement(1996934..1998256) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 1998256 17430792 P423_09850 Escherichia coli JJ1886 peptidase YP_008721997.1 1996934 R 1355100 CDS YP_008721998.1 556551839 17430793 complement(1998272..1999219) 1 NC_022648.1 involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc ABC transporter substrate-binding protein 1999219 znuA 17430793 znuA Escherichia coli JJ1886 zinc ABC transporter substrate-binding protein YP_008721998.1 1998272 R 1355100 CDS YP_008721999.1 556554545 17430794 1999283..2000038 1 NC_022648.1 involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; zinc transporter 2000038 znuC 17430794 znuC Escherichia coli JJ1886 zinc transporter YP_008721999.1 1999283 D 1355100 CDS YP_008722000.1 556551840 17430795 2000035..2000820 1 NC_022648.1 involved in transport of zinc(II) with ZnuA and C; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter 2000820 znuB 17430795 znuB Escherichia coli JJ1886 zinc transporter YP_008722000.1 2000035 D 1355100 CDS YP_008722001.1 556551841 17430796 complement(2001014..2001736) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2001736 17430796 P423_09870 Escherichia coli JJ1886 integrase YP_008722001.1 2001014 R 1355100 CDS YP_008722002.1 556554546 17430797 complement(2001841..2002014) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 2002014 17430797 P423_09875 Escherichia coli JJ1886 transposase YP_008722002.1 2001841 R 1355100 CDS YP_008722003.1 556554547 17430798 complement(2002119..2002307) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2002307 17430798 P423_09880 Escherichia coli JJ1886 hypothetical protein YP_008722003.1 2002119 R 1355100 CDS YP_008722004.1 556551842 17430799 complement(2002472..2003482) 1 NC_022648.1 promotes strand exchange during homologous recombination; RuvAB complex promotes branch migration; RuvABC complex scans the DNA during branch migration and resolves Holliday junctions at consensus sequences; forms hexameric rings around opposite DNA arms; requires ATP for branch migration and orientation of RuvAB complex determines direction of migration; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction DNA helicase RuvB 2003482 ruvB 17430799 ruvB Escherichia coli JJ1886 Holliday junction DNA helicase RuvB YP_008722004.1 2002472 R 1355100 CDS YP_008722005.1 556551843 17430800 complement(2003491..2004102) 1 NC_022648.1 plays an essential role in ATP-dependent branch migration of the Holliday junction; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction DNA helicase RuvA 2004102 ruvA 17430800 ruvA Escherichia coli JJ1886 Holliday junction DNA helicase RuvA YP_008722005.1 2003491 R 1355100 CDS YP_008722006.1 556551844 17430801 2004377..2004979 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2004979 17430801 P423_09895 Escherichia coli JJ1886 hypothetical protein YP_008722006.1 2004377 D 1355100 CDS YP_008722007.1 556551845 17430802 complement(2004981..2005502) 1 NC_022648.1 endonuclease; resolves Holliday structures; forms a complex of RuvABC; the junction binding protein RuvA forms a hexameric ring along with the RuvB helicase and catalyzes branch migration; RuvC then interacts with RuvAB to resolve the Holliday junction by nicking DNA strands of like polarity; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction resolvase 2005502 ruvC 17430802 ruvC Escherichia coli JJ1886 Holliday junction resolvase YP_008722007.1 2004981 R 1355100 CDS YP_008722008.1 556551846 17430803 complement(2005537..2006277) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2006277 17430803 P423_09905 Escherichia coli JJ1886 hypothetical protein YP_008722008.1 2005537 R 1355100 CDS YP_008722009.1 556551847 17430804 complement(2006306..2006749) 1 NC_022648.1 catalyzes the formation of dihydroneopterin phosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroneopterin triphosphate pyrophosphatase 2006749 nudB 17430804 nudB Escherichia coli JJ1886 dihydroneopterin triphosphate pyrophosphatase YP_008722009.1 2006306 R 1355100 CDS YP_008722010.1 556551848 17430805 complement(2006751..2008523) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartyl-tRNA synthetase 2008523 17430805 P423_09915 Escherichia coli JJ1886 aspartyl-tRNA synthetase YP_008722010.1 2006751 R 1355100 CDS YP_008722011.1 556551849 17430806 2008833..2009399 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 2009399 17430806 P423_09920 Escherichia coli JJ1886 hydrolase YP_008722011.1 2008833 D 1355100 CDS YP_008722012.1 556551850 17430807 2009396..2010214 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2010214 17430807 P423_09925 Escherichia coli JJ1886 hypothetical protein YP_008722012.1 2009396 D 1355100 CDS YP_008722013.1 556551851 17430808 2010267..2010662 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2010662 17430808 P423_09930 Escherichia coli JJ1886 membrane protein YP_008722013.1 2010267 D 1355100 CDS YP_008722014.1 556551852 17430809 2010703..2011446 1 NC_022648.1 catalyzes the conversion of 5-methoxyuridine to uridine-5-oxyacetic acid in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA cytosine-C5-methyltransferase 2011446 17430809 P423_09935 Escherichia coli JJ1886 rRNA cytosine-C5-methyltransferase YP_008722014.1 2010703 D 1355100 CDS YP_008722015.1 556551853 17430810 2011443..2012414 1 NC_022648.1 catalyzes the conversion of 5-hydroxyuridine to 5-methoxyuridine in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 2012414 17430810 P423_09940 Escherichia coli JJ1886 tRNA methyltransferase YP_008722015.1 2011443 D 1355100 CDS YP_008722016.1 556551854 17430811 complement(2012450..2014879) 1 NC_022648.1 catalyzes the formation of biotin from biotin sulfoxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin sulfoxide reductase 2014879 bisC 17430811 bisC Escherichia coli JJ1886 biotin sulfoxide reductase YP_008722016.1 2012450 R 1355100 CDS YP_008722017.1 556551855 17430812 complement(2014904..2016004) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C 2016004 17430812 P423_09950 Escherichia coli JJ1886 cytochrome C YP_008722017.1 2014904 R 1355100 CDS YP_008722018.1 556551856 17430813 complement(2016392..2017138) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; copper homeostasis protein CutC 2017138 17430813 P423_09955 Escherichia coli JJ1886 copper homeostasis protein CutC YP_008722018.1 2016392 R 1355100 CDS YP_008722019.1 556551857 17430814 complement(2017152..2017724) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2017724 17430814 P423_09960 Escherichia coli JJ1886 hypothetical protein YP_008722019.1 2017152 R 1355100 CDS YP_008722020.1 556551858 17430815 2017934..2019667 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginyl-tRNA synthetase 2019667 17430815 P423_09965 Escherichia coli JJ1886 arginyl-tRNA synthetase YP_008722020.1 2017934 D 1355100 CDS YP_008722021.1 556551859 17430816 complement(2019720..2020112) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar protein flhE 2020112 17430816 P423_09970 Escherichia coli JJ1886 flagellar protein flhE YP_008722021.1 2019720 R 1355100 CDS YP_008722022.1 556551860 17430817 complement(2020112..2022190) 1 NC_022648.1 membrane protein involved in the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FlhA 2022190 flhA 17430817 flhA Escherichia coli JJ1886 flagellar biosynthesis protein FlhA YP_008722022.1 2020112 R 1355100 CDS YP_008722023.1 556551861 17430818 complement(2022183..2023331) 1 NC_022648.1 membrane protein responsible for substrate specificity switching from rod/hook-type export to filament-type export; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FlhB 2023331 flhB 17430818 flhB Escherichia coli JJ1886 flagellar biosynthesis protein FlhB YP_008722023.1 2022183 R 1355100 CDS YP_008722024.1 556551862 17430819 complement(2023520..2024164) 1 NC_022648.1 cytosolic phosphatase which functions in the chemotaxis signal transduction complex by controlling the level of phosphorylated CheY through dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheZ 2024164 17430819 P423_09985 Escherichia coli JJ1886 chemotaxis protein CheZ YP_008722024.1 2023520 R 1355100 CDS YP_008722025.1 556551863 17430820 complement(2024175..2024564) 1 NC_022648.1 chemotaxis regulator that, when phosphorylated, interacts with the flagellar motor causing the flagella to spin clockwise which causes the cell to tumble; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheY 2024564 17430820 P423_09990 Escherichia coli JJ1886 chemotaxis protein CheY YP_008722025.1 2024175 R 1355100 CDS YP_008722026.1 556551864 17430821 complement(2024579..2025628) 1 NC_022648.1 regulates chemotaxis by demethylation of methyl-accepting chemotaxis proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein 2025628 17430821 P423_09995 Escherichia coli JJ1886 chemotaxis protein YP_008722026.1 2024579 R 1355100 CDS YP_008722027.1 556551865 17430822 complement(2025631..2026491) 1 NC_022648.1 methylates the MCP; Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheR 2026491 17430822 P423_10000 Escherichia coli JJ1886 chemotaxis protein CheR YP_008722027.1 2025631 R 1355100 CDS YP_008722028.1 556551866 17430823 complement(2026782..2028443) 1 NC_022648.1 serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-accepting chemotaxis protein 2028443 17430823 P423_10005 Escherichia coli JJ1886 methyl-accepting chemotaxis protein YP_008722028.1 2026782 R 1355100 CDS YP_008722029.1 556551867 17430824 complement(2028588..2029091) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine-binding chemotaxis protein 2029091 17430824 P423_10010 Escherichia coli JJ1886 purine-binding chemotaxis protein YP_008722029.1 2028588 R 1355100 CDS YP_008722030.1 556551868 17430825 complement(2029112..2031076) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chemotaxis protein CheA 2031076 17430825 P423_10015 Escherichia coli JJ1886 chemotaxis protein CheA YP_008722030.1 2029112 R 1355100 CDS YP_008722031.1 556551869 17430826 complement(2031081..2032007) 1 NC_022648.1 with MotA forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor protein MotB 2032007 motB 17430826 motB Escherichia coli JJ1886 flagellar motor protein MotB YP_008722031.1 2031081 R 1355100 CDS YP_008722032.1 556551870 17430827 complement(2032004..2032891) 1 NC_022648.1 With MotB forms the ion channels that couple flagellar rotation to proton/sodium motive force across the membrane and forms the stator elements of the rotary flagellar machine; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor protein MotA 2032891 17430827 P423_10025 Escherichia coli JJ1886 flagellar motor protein MotA YP_008722032.1 2032004 R 1355100 CDS YP_008722033.1 556551871 17430828 complement(2033018..2033596) 1 NC_022648.1 With FlhD is involved in the activation of class 2 flagellar genes and as well as a number of other genetic systems; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 2033596 17430828 P423_10030 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008722033.1 2033018 R 1355100 CDS YP_008722034.1 556551872 17430829 complement(2033599..2033949) 1 NC_022648.1 with FlhC is involved in the activation of class 2 flagellar genes and is involved in the regulation of a number of other genetic systems; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional activator FlhD 2033949 17430829 P423_10035 Escherichia coli JJ1886 transcriptional activator FlhD YP_008722034.1 2033599 R 1355100 CDS YP_008722035.1 556551873 17430830 2034729..2035157 1 NC_022648.1 ppGpp-dependent; membrane-associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein C 2035157 17430830 P423_10040 Escherichia coli JJ1886 universal stress protein C YP_008722035.1 2034729 D 1355100 CDS YP_008722036.1 556551874 17430831 complement(2035164..2036588) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose-6-phosphate synthase 2036588 17430831 P423_10045 Escherichia coli JJ1886 trehalose-6-phosphate synthase YP_008722036.1 2035164 R 1355100 CDS YP_008722037.1 556551875 17430832 complement(2036563..2037363) 1 NC_022648.1 biosynthetic; catalyzes the formation of trehalose and phosphate from trehalose-6-phosphate; expression is increased under osmotic stress and induced during the transition to stationary phase and by decreased temperature; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose-6-phosphate phosphatase 2037363 17430832 P423_10050 Escherichia coli JJ1886 trehalose-6-phosphate phosphatase YP_008722037.1 2036563 R 1355100 CDS YP_008722038.1 556551876 17430833 complement(2037530..2038516) 1 NC_022648.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose ABC transporter permease 2038516 araH 17430833 araH Escherichia coli JJ1886 arabinose ABC transporter permease YP_008722038.1 2037530 R 1355100 CDS YP_008722039.1 556551877 17430834 complement(2038531..2040045) 1 NC_022648.1 Part of the ABC transporter complex AraFGH involved in the high affinity transport of arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose ABC transporter ATP-binding protein 2040045 araG 17430834 araG Escherichia coli JJ1886 arabinose ABC transporter ATP-binding protein YP_008722039.1 2038531 R 1355100 CDS YP_008722040.1 556551878 17430835 complement(2040115..2041104) 1 NC_022648.1 with AraGH is involved in the transport of arabinose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose ABC transporter substrate-binding protein 2041104 17430835 P423_10065 Escherichia coli JJ1886 arabinose ABC transporter substrate-binding protein YP_008722040.1 2040115 R 1355100 CDS YP_008722041.1 556551879 17430836 2041899..2042402 1 NC_022648.1 ferritin B; required for virulence in Salmonella; may be involved in repair of damaged Fe-S clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferritin 2042402 17430836 P423_10070 Escherichia coli JJ1886 ferritin YP_008722041.1 2041899 D 1355100 CDS YP_008722042.1 556551880 17430837 complement(2042480..2042731) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2042731 17430837 P423_10075 Escherichia coli JJ1886 hypothetical protein YP_008722042.1 2042480 R 1355100 CDS YP_008722043.1 556554548 17430838 complement(2043026..2043139) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2043139 17430838 P423_10080 Escherichia coli JJ1886 hypothetical protein YP_008722043.1 2043026 R 1355100 CDS YP_008722044.1 556554549 17430839 complement(2043223..2043399) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2043399 17430839 P423_10085 Escherichia coli JJ1886 hypothetical protein YP_008722044.1 2043223 R 1355100 CDS YP_008722045.1 556551881 17430840 2043691..2044188 1 NC_022648.1 cytoplasmic iron storage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferritin 2044188 17430840 P423_10090 Escherichia coli JJ1886 ferritin YP_008722045.1 2043691 D 1355100 CDS YP_008722046.1 556551882 17430841 complement(2044226..2044465) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2044465 17430841 P423_10095 Escherichia coli JJ1886 hypothetical protein YP_008722046.1 2044226 R 1355100 CDS YP_008722047.1 556551883 17430842 2044656..2045867 1 NC_022648.1 tyrosine specific permease; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine transporter TyrP 2045867 17430842 P423_10100 Escherichia coli JJ1886 tyrosine transporter TyrP YP_008722047.1 2044656 D 1355100 CDS YP_008722048.1 556551884 17430843 complement(2045918..2046583) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2046583 17430843 P423_10105 Escherichia coli JJ1886 hypothetical protein YP_008722048.1 2045918 R 1355100 CDS YP_008722049.1 556554550 17430844 complement(2047055..2047441) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2047441 17430844 P423_10110 Escherichia coli JJ1886 hypothetical protein YP_008722049.1 2047055 R 1355100 CDS YP_008722050.1 556554551 17430845 complement(2047912..2048685) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; late control D family protein 2048685 17430845 P423_10115 Escherichia coli JJ1886 late control D family protein YP_008722050.1 2047912 R 1355100 CDS YP_008722051.1 556554552 17430846 complement(2048689..2048901) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2048901 17430846 P423_10120 Escherichia coli JJ1886 hypothetical protein YP_008722051.1 2048689 R 1355100 CDS YP_008722052.1 556554553 17430847 complement(2049075..2049497) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2049497 17430847 P423_10125 Escherichia coli JJ1886 hypothetical protein YP_008722052.1 2049075 R 1355100 CDS YP_008722053.1 556554554 17430848 complement(2049500..2051140) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2051140 17430848 P423_10130 Escherichia coli JJ1886 hypothetical protein YP_008722053.1 2049500 R 1355100 CDS YP_008722054.1 556554555 17430849 complement(2051249..2051530) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2051530 17430849 P423_10135 Escherichia coli JJ1886 hypothetical protein YP_008722054.1 2051249 R 1355100 CDS YP_008722055.1 556554556 17430850 complement(2051543..2052055) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phage tail protein 2052055 17430850 P423_10140 Escherichia coli JJ1886 phage tail protein YP_008722055.1 2051543 R 1355100 CDS YP_008722056.1 556551885 17430851 complement(2052073..2053575) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail sheath protein 2053575 17430851 P423_10145 Escherichia coli JJ1886 tail sheath protein YP_008722056.1 2052073 R 1355100 CDS YP_008722057.1 556554557 17430852 complement(2053572..2053961) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2053961 17430852 P423_10150 Escherichia coli JJ1886 hypothetical protein YP_008722057.1 2053572 R 1355100 CDS YP_008722058.1 556554558 17430853 complement(2053961..2055145) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2055145 17430853 P423_10155 Escherichia coli JJ1886 hypothetical protein YP_008722058.1 2053961 R 1355100 CDS YP_008722059.1 556551886 17430854 complement(2055138..2055764) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2055764 17430854 P423_10160 Escherichia coli JJ1886 tail protein YP_008722059.1 2055138 R 1355100 CDS YP_008722060.1 556551887 17430855 complement(2055767..2056687) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; baseplate assembly protein 2056687 17430855 P423_10165 Escherichia coli JJ1886 baseplate assembly protein YP_008722060.1 2055767 R 1355100 CDS YP_008722061.1 556551888 17430856 complement(2056684..2057025) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage baseplate protein 2057025 17430856 P423_10170 Escherichia coli JJ1886 phage baseplate protein YP_008722061.1 2056684 R 1355100 CDS YP_008722062.1 556554559 17430857 complement(2057028..2057930) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; baseplate assembly protein 2057930 17430857 P423_10175 Escherichia coli JJ1886 baseplate assembly protein YP_008722062.1 2057028 R 1355100 CDS YP_008722063.1 556554560 17430858 complement(2057911..2058447) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2058447 17430858 P423_10180 Escherichia coli JJ1886 hypothetical protein YP_008722063.1 2057911 R 1355100 CDS YP_008722064.1 556554561 17430859 complement(2058444..2059124) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2059124 17430859 P423_10185 Escherichia coli JJ1886 hypothetical protein YP_008722064.1 2058444 R 1355100 CDS YP_008722065.1 556554562 17430860 complement(2059156..2059497) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2059497 17430860 P423_10190 Escherichia coli JJ1886 hypothetical protein YP_008722065.1 2059156 R 1355100 CDS YP_008722066.1 556554563 17430861 complement(2059533..2059952) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-packaging protein 2059952 17430861 P423_10195 Escherichia coli JJ1886 DNA-packaging protein YP_008722066.1 2059533 R 1355100 CDS YP_008722067.1 556551889 17430862 complement(2059987..2061021) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head protein 2061021 17430862 P423_10200 Escherichia coli JJ1886 head protein YP_008722067.1 2059987 R 1355100 CDS YP_008722068.1 556551890 17430863 complement(2061080..2061409) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Head decoration protein 2061409 17430863 P423_10205 Escherichia coli JJ1886 Head decoration protein YP_008722068.1 2061080 R 1355100 CDS YP_008722069.1 556551891 17430864 complement(2061409..2062716) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; capsid assembly protein 2062716 17430864 P423_10210 Escherichia coli JJ1886 capsid assembly protein YP_008722069.1 2061409 R 1355100 CDS YP_008722070.1 556551892 17430865 complement(2062716..2064290) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; plasmid partitioning protein ParB 2064290 17430865 P423_10215 Escherichia coli JJ1886 plasmid partitioning protein ParB YP_008722070.1 2062716 R 1355100 CDS YP_008722071.1 556554564 17430866 complement(2064287..2064520) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2064520 17430866 P423_10220 Escherichia coli JJ1886 hypothetical protein YP_008722071.1 2064287 R 1355100 CDS YP_008722072.1 556551893 17430867 complement(2064520..2066400) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 2066400 17430867 P423_10225 Escherichia coli JJ1886 terminase YP_008722072.1 2064520 R 1355100 CDS YP_008722073.1 556554565 17430868 complement(2066369..2066935) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2066935 17430868 P423_10230 Escherichia coli JJ1886 hypothetical protein YP_008722073.1 2066369 R 1355100 CDS YP_008722074.1 556554566 17430869 2067289..2067549 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2067549 17430869 P423_10235 Escherichia coli JJ1886 hypothetical protein YP_008722074.1 2067289 D 1355100 CDS YP_008722075.1 556554567 17430870 complement(2067609..2067803) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2067803 17430870 P423_10240 Escherichia coli JJ1886 hypothetical protein YP_008722075.1 2067609 R 1355100 CDS YP_008722076.1 556554568 17430871 complement(2067811..2068290) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2068290 17430871 P423_10245 Escherichia coli JJ1886 hypothetical protein YP_008722076.1 2067811 R 1355100 CDS YP_008722077.1 556554569 17430872 complement(2068290..2068562) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2068562 17430872 P423_10250 Escherichia coli JJ1886 hypothetical protein YP_008722077.1 2068290 R 1355100 CDS YP_008722078.1 556554570 17430873 complement(2068562..2068945) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2068945 17430873 P423_10255 Escherichia coli JJ1886 hypothetical protein YP_008722078.1 2068562 R 1355100 CDS YP_008722079.1 556554571 17430874 complement(2069058..2069729) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; antitermination protein 2069729 17430874 P423_10260 Escherichia coli JJ1886 antitermination protein YP_008722079.1 2069058 R 1355100 CDS YP_008722080.1 556551894 17430875 complement(2069729..2070022) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2070022 17430875 P423_10265 Escherichia coli JJ1886 hypothetical protein YP_008722080.1 2069729 R 1355100 CDS YP_008722081.1 556554572 17430876 complement(2070019..2070615) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2070615 17430876 P423_10270 Escherichia coli JJ1886 hypothetical protein YP_008722081.1 2070019 R 1355100 CDS YP_008722082.1 556554573 17430877 complement(2070693..2070872) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2070872 17430877 P423_10275 Escherichia coli JJ1886 hypothetical protein YP_008722082.1 2070693 R 1355100 CDS YP_008722083.1 556554574 17430878 complement(2071024..2071665) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2071665 17430878 P423_10280 Escherichia coli JJ1886 hypothetical protein YP_008722083.1 2071024 R 1355100 CDS YP_008722084.1 556554575 17430879 2071909..2072142 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2072142 17430879 P423_10285 Escherichia coli JJ1886 hypothetical protein YP_008722084.1 2071909 D 1355100 CDS YP_008722085.1 556554576 17430880 2072541..2073029 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2073029 17430880 P423_10290 Escherichia coli JJ1886 hypothetical protein YP_008722085.1 2072541 D 1355100 CDS YP_008722086.1 556554577 17430881 2073039..2073644 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2073644 17430881 P423_10295 Escherichia coli JJ1886 hypothetical protein YP_008722086.1 2073039 D 1355100 CDS YP_008722087.1 556554578 17430882 complement(2074107..2074805) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2074805 17430882 P423_10300 Escherichia coli JJ1886 hypothetical protein YP_008722087.1 2074107 R 1355100 CDS YP_008722088.1 556554579 17430883 2075993..2076916 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2076916 17430883 P423_10305 Escherichia coli JJ1886 hypothetical protein YP_008722088.1 2075993 D 1355100 CDS YP_008722089.1 556551895 17430884 complement(2077091..2077909) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antirepressor 2077909 17430884 P423_10310 Escherichia coli JJ1886 antirepressor YP_008722089.1 2077091 R 1355100 CDS YP_008722090.1 556554580 17430885 complement(2078152..2078373) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2078373 17430885 P423_10315 Escherichia coli JJ1886 hypothetical protein YP_008722090.1 2078152 R 1355100 CDS YP_008722091.1 556554581 17430886 complement(2078561..2078785) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2078785 17430886 P423_10320 Escherichia coli JJ1886 hypothetical protein YP_008722091.1 2078561 R 1355100 CDS YP_008722092.1 556554582 17430887 complement(2078782..2079093) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 2079093 17430887 P423_10325 Escherichia coli JJ1886 DNA-binding protein YP_008722092.1 2078782 R 1355100 CDS YP_008722093.1 556554583 17430888 complement(2079090..2079326) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2079326 17430888 P423_10330 Escherichia coli JJ1886 hypothetical protein YP_008722093.1 2079090 R 1355100 CDS YP_008722094.1 556554584 17430889 complement(2079328..2079738) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2079738 17430889 P423_10335 Escherichia coli JJ1886 hypothetical protein YP_008722094.1 2079328 R 1355100 CDS YP_008722095.1 556551896 17430890 complement(2079777..2081192) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; replication protein P 2081192 17430890 P423_10340 Escherichia coli JJ1886 replication protein P YP_008722095.1 2079777 R 1355100 CDS YP_008722096.1 556554585 17430891 complement(2081182..2081937) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; replication protein 2081937 17430891 P423_10345 Escherichia coli JJ1886 replication protein YP_008722096.1 2081182 R 1355100 CDS YP_008722097.1 556554586 17430892 complement(2081934..2082158) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; adenylate cyclase 2082158 17430892 P423_10350 Escherichia coli JJ1886 adenylate cyclase YP_008722097.1 2081934 R 1355100 CDS YP_008722098.1 556554587 17430893 complement(2082198..2082674) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2082674 17430893 P423_10355 Escherichia coli JJ1886 hypothetical protein YP_008722098.1 2082198 R 1355100 CDS YP_008722099.1 556554588 17430894 complement(2082733..2082963) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2082963 17430894 P423_10360 Escherichia coli JJ1886 hypothetical protein YP_008722099.1 2082733 R 1355100 CDS YP_008722100.1 556554589 17430895 2083083..2083475 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2083475 17430895 P423_10365 Escherichia coli JJ1886 hypothetical protein YP_008722100.1 2083083 D 1355100 CDS YP_008722101.1 556554590 17430896 2084486..2084806 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2084806 17430896 P423_10370 Escherichia coli JJ1886 hypothetical protein YP_008722101.1 2084486 D 1355100 CDS YP_008722102.1 556554591 17430897 2084837..2087053 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2087053 17430897 P423_10375 Escherichia coli JJ1886 hypothetical protein YP_008722102.1 2084837 D 1355100 CDS YP_008722103.1 556554592 17430898 2087050..2087619 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2087619 17430898 P423_10380 Escherichia coli JJ1886 hypothetical protein YP_008722103.1 2087050 D 1355100 CDS YP_008722104.1 556554593 17430899 2087619..2087801 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2087801 17430899 P423_10385 Escherichia coli JJ1886 hypothetical protein YP_008722104.1 2087619 D 1355100 CDS YP_008722105.1 556551897 17430900 2088011..2088274 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2088274 17430900 P423_10390 Escherichia coli JJ1886 hypothetical protein YP_008722105.1 2088011 D 1355100 CDS YP_008722106.1 556551898 17430901 2088279..2089259 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2089259 17430901 P423_10395 Escherichia coli JJ1886 integrase YP_008722106.1 2088279 D 1355100 CDS YP_008722107.1 556551899 17430905 complement(2089843..2090391) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylglycerophosphate synthetase 2090391 17430905 P423_10415 Escherichia coli JJ1886 phosphatidylglycerophosphate synthetase YP_008722107.1 2089843 R 1355100 CDS YP_008722108.1 556551900 17430906 complement(2090448..2092280) 1 NC_022648.1 The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision; Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit C 2092280 uvrC 17430906 uvrC Escherichia coli JJ1886 excinuclease ABC subunit C YP_008722108.1 2090448 R 1355100 CDS YP_008722109.1 556551901 17430907 complement(2092277..2092933) 1 NC_022648.1 in Escherichia coli the protein UvrY is part of a two-component system along with BarA that is needed for efficient switching between glycolytic and gluconeogenic carbon sources possibly by regulating the Csr system; in Salmonella SirA and BarA regulate virulence gene expression also via the Csr system; Derived by automated computational analysis using gene prediction method: Protein Homology.; response regulator 2092933 sirA 17430907 sirA Escherichia coli JJ1886 response regulator YP_008722109.1 2092277 R 1355100 CDS YP_008722110.1 556551902 17430908 2093392..2093616 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2093616 17430908 P423_10430 Escherichia coli JJ1886 hypothetical protein YP_008722110.1 2093392 D 1355100 CDS YP_008722111.1 556551903 17430909 complement(2093684..2094406) 1 NC_022648.1 regulates genes involved in cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2094406 17430909 P423_10435 Escherichia coli JJ1886 transcriptional regulator YP_008722111.1 2093684 R 1355100 CDS YP_008722112.1 556551904 17430910 complement(2094636..2095388) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine ABC transporter ATP-binding protein 2095388 17430910 P423_10440 Escherichia coli JJ1886 arginine ABC transporter ATP-binding protein YP_008722112.1 2094636 R 1355100 CDS YP_008722113.1 556551905 17430911 complement(2095385..2096053) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 2096053 17430911 P423_10445 Escherichia coli JJ1886 amino acid ABC transporter permease YP_008722113.1 2095385 R 1355100 CDS YP_008722114.1 556551906 17430912 complement(2096068..2097054) 1 NC_022648.1 catalyzes the formation of pyruvate from D-cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-cysteine desulfhydrase 2097054 17430912 P423_10450 Escherichia coli JJ1886 D-cysteine desulfhydrase YP_008722114.1 2096068 R 1355100 CDS YP_008722115.1 556551907 17430913 complement(2097159..2097959) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cystine transporter subunit 2097959 17430913 P423_10455 Escherichia coli JJ1886 cystine transporter subunit YP_008722115.1 2097159 R 1355100 CDS YP_008722116.1 556551908 17430914 complement(2098047..2098598) 1 NC_022648.1 expression activator of the class 2 type of flagellar operons, essential to achieve maximal cell motility; activator of type 1 fimbrial gene expression; cell density-responsive regulator; FliZ in Salmonella typhimurium induces HilA, an activator of invasion genes necessary to achieve full virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliZ 2098598 17430914 P423_10460 Escherichia coli JJ1886 flagellar biosynthesis protein FliZ YP_008722116.1 2098047 R 1355100 CDS YP_008722117.1 556551909 17430915 complement(2098644..2099363) 1 NC_022648.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this sigma factor directs late flagellar biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis sigma factor 2099363 fliA 17430915 fliA Escherichia coli JJ1886 flagellar biosynthesis sigma factor YP_008722117.1 2098644 R 1355100 CDS YP_008722118.1 556551910 17430916 complement(2099527..2100576) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellin 2100576 17430916 P423_10470 Escherichia coli JJ1886 flagellin YP_008722118.1 2099527 R 1355100 CDS YP_008722119.1 556551911 17430917 2100824..2102239 1 NC_022648.1 involved in flagellin assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar capping protein 2102239 fliD 17430917 fliD Escherichia coli JJ1886 flagellar capping protein YP_008722119.1 2100824 D 1355100 CDS YP_008722120.1 556551912 17430918 2102255..2102665 1 NC_022648.1 flagellin specific chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliS 2102665 fliS 17430918 fliS Escherichia coli JJ1886 flagellar biosynthesis protein FliS YP_008722120.1 2102255 D 1355100 CDS YP_008722121.1 556551913 17430919 2102665..2103030 1 NC_022648.1 binds flagellar cap subunits (FliD) and seems to prevents their oligomerization prior to its translocation through the flagellum-specific type III export pathway; acts as a repressor of flagellar class 2 operons by preventing FlhD2C2 to bind the promoter and inhibiting the FlhD2C2-dependent transcription; member of the type III cytoplasmic chaperone family; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliT 2103030 17430919 P423_10485 Escherichia coli JJ1886 flagellar biosynthesis protein FliT YP_008722121.1 2102665 D 1355100 CDS YP_008722122.1 556551914 17430920 2103108..2104595 1 NC_022648.1 converts 1,4-alpha-D-glucans to maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-amylase 2104595 17430920 P423_10490 Escherichia coli JJ1886 alpha-amylase YP_008722122.1 2103108 D 1355100 CDS YP_008722123.1 556551915 17430921 complement(2104629..2105042) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2105042 17430921 P423_10495 Escherichia coli JJ1886 lipoprotein YP_008722123.1 2104629 R 1355100 CDS YP_008722124.1 556551916 17430922 2105229..2106434 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2106434 17430922 P423_10500 Escherichia coli JJ1886 membrane protein YP_008722124.1 2105229 D 1355100 CDS YP_008722125.1 556551917 17430923 2106431..2106664 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2106664 17430923 P423_10505 Escherichia coli JJ1886 hypothetical protein YP_008722125.1 2106431 D 1355100 CDS YP_008722126.1 556551918 17430924 2106773..2107270 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2107270 17430924 P423_10510 Escherichia coli JJ1886 hypothetical protein YP_008722126.1 2106773 D 1355100 CDS YP_008722127.1 556551919 17430925 2107480..2108028 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 2108028 17430925 P423_10515 Escherichia coli JJ1886 transposase YP_008722127.1 2107480 D 1355100 CDS YP_008722128.1 556554594 17430926 2108610..2108858 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2108858 17430926 P423_10520 Escherichia coli JJ1886 hypothetical protein YP_008722128.1 2108610 D 1355100 CDS YP_008722129.1 556551920 17430927 complement(2108992..2109543) 1 NC_022648.1 YbhB; similar to rat and human kinase inhibitory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; kinase inhibitor protein 2109543 17430927 P423_10525 Escherichia coli JJ1886 kinase inhibitor protein YP_008722129.1 2108992 R 1355100 CDS YP_008722130.1 556554595 17430928 complement(2109712..2110044) 1 NC_022648.1 member of the small MDR (multidrug resistance) family of transporters; in Escherichia coli this protein provides resistance against a number of positively charged compounds including ethidium bromide and erythromycin; proton-dependent secondary transporter which exchanges protons for compound translocation; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; multidrug transporter 2110044 emrE 17430928 emrE Escherichia coli JJ1886 multidrug transporter YP_008722130.1 2109712 R 1355100 CDS YP_008722131.1 556554596 17430929 2110172..2110300 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2110300 17430929 P423_10535 Escherichia coli JJ1886 hypothetical protein YP_008722131.1 2110172 D 1355100 CDS YP_008722132.1 556551921 17430930 complement(2110388..2110702) 1 NC_022648.1 forms a junction between the M-ring and FlgB during flagella biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-basal body protein FliE 2110702 fliE 17430930 fliE Escherichia coli JJ1886 flagellar hook-basal body protein FliE YP_008722132.1 2110388 R 1355100 CDS YP_008722133.1 556551922 17430931 2110917..2112575 1 NC_022648.1 the MS-ring anchors the flagellum to the cytoplasmic membrane; part of the flagellar basal body which consists of four rings L, P, S, and M mounted on a central rod; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar MS-ring protein 2112575 fliF 17430931 fliF Escherichia coli JJ1886 flagellar MS-ring protein YP_008722133.1 2110917 D 1355100 CDS YP_008722134.1 556551923 17430932 2112568..2113563 1 NC_022648.1 One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor switch protein FliG 2113563 fliG 17430932 fliG Escherichia coli JJ1886 flagellar motor switch protein FliG YP_008722134.1 2112568 D 1355100 CDS YP_008722135.1 556551924 17430933 2113556..2114242 1 NC_022648.1 binds to and inhibits the function of flagella specific ATPase FliI; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar assembly protein H 2114242 fliH 17430933 fliH Escherichia coli JJ1886 flagellar assembly protein H YP_008722135.1 2113556 D 1355100 CDS YP_008722136.1 556551925 17430934 2114242..2115615 1 NC_022648.1 involved in type III protein export during flagellum assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP synthase 2115615 fliI 17430934 fliI Escherichia coli JJ1886 ATP synthase YP_008722136.1 2114242 D 1355100 CDS YP_008722137.1 556551926 17430935 2115634..2116077 1 NC_022648.1 rod/hook and filament chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis chaperone 2116077 fliJ 17430935 fliJ Escherichia coli JJ1886 flagellar biosynthesis chaperone YP_008722137.1 2115634 D 1355100 CDS YP_008722138.1 556551927 17430936 2116074..2117201 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar hook-length control protein FliK 2117201 17430936 P423_10570 Escherichia coli JJ1886 flagellar hook-length control protein FliK YP_008722138.1 2116074 D 1355100 CDS YP_008722139.1 556551928 17430937 2117306..2117770 1 NC_022648.1 interacts with cytoplasmic MS ring of the basal body and may act to stabilize the MotAB complexes which surround the MS ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar basal body protein FliL 2117770 fliL 17430937 fliL Escherichia coli JJ1886 flagellar basal body protein FliL YP_008722139.1 2117306 D 1355100 CDS YP_008722140.1 556551929 17430938 2117775..2118779 1 NC_022648.1 with FliG and FliN makes up the switch complex which is involved in switching the direction of the flagella rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor switch protein FliM 2118779 fliM 17430938 fliM Escherichia coli JJ1886 flagellar motor switch protein FliM YP_008722140.1 2117775 D 1355100 CDS YP_008722141.1 556551930 17430939 2118776..2119189 1 NC_022648.1 One of three proteins involved in switching the direction of the flagellar rotation; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar motor switch protein FliN 2119189 fliN 17430939 fliN Escherichia coli JJ1886 flagellar motor switch protein FliN YP_008722141.1 2118776 D 1355100 CDS YP_008722142.1 556551931 17430940 2119192..2119557 1 NC_022648.1 with FlhA, FlhB, FliP, FliQ and FliR is one of the membrane components of the flagellar export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliO 2119557 17430940 P423_10590 Escherichia coli JJ1886 flagellar biosynthesis protein FliO YP_008722142.1 2119192 D 1355100 CDS YP_008722143.1 556551932 17430941 2119557..2120294 1 NC_022648.1 FliP, with proteins FliQ and FliR, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliP 2120294 fliP 17430941 fliP Escherichia coli JJ1886 flagellar biosynthesis protein FliP YP_008722143.1 2119557 D 1355100 CDS YP_008722144.1 556551933 17430942 2120304..2120573 1 NC_022648.1 with proteins FliP and FliR forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliQ 2120573 fliQ 17430942 fliQ Escherichia coli JJ1886 flagellar biosynthesis protein FliQ YP_008722144.1 2120304 D 1355100 CDS YP_008722145.1 556551934 17430943 2120582..2121367 1 NC_022648.1 FliR, with proteins FliP and FliQ, forms the core of the central channel in the flagella export apparatus; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagellar biosynthesis protein FliR 2121367 fliR 17430943 fliR Escherichia coli JJ1886 flagellar biosynthesis protein FliR YP_008722145.1 2120582 D 1355100 CDS YP_008722146.1 556551935 17430944 2121657..2122280 1 NC_022648.1 with RcsB is a positive regulator of capsular polysaccharide synthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid capsular biosynthesis activation protein A 2122280 rcsA 17430944 rcsA Escherichia coli JJ1886 colanic acid capsular biosynthesis activation protein A YP_008722146.1 2121657 D 1355100 CDS YP_008722147.1 556551936 17430945 complement(2122324..2122512) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2122512 17430945 P423_10615 Escherichia coli JJ1886 hypothetical protein YP_008722147.1 2122324 R 1355100 CDS YP_008722148.1 556551937 17430946 2122675..2122902 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2122902 17430946 P423_10620 Escherichia coli JJ1886 hypothetical protein YP_008722148.1 2122675 D 1355100 CDS YP_008722149.1 556551938 17430947 2123198..2124013 1 NC_022648.1 catalyzes the hydrolysis of mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannosyl-3-phosphoglycerate phosphatase 2124013 17430947 P423_10625 Escherichia coli JJ1886 mannosyl-3-phosphoglycerate phosphatase YP_008722149.1 2123198 D 1355100 CDS YP_008722150.1 556551939 17430948 complement(2124010..2125704) 1 NC_022648.1 catalyzes the formation of cyclic di-3',5'-guanylate from guanosine triphosphate; involved in the regulation of cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 2125704 17430948 P423_10630 Escherichia coli JJ1886 diguanylate cyclase YP_008722150.1 2124010 R 1355100 CDS YP_008722151.1 556551940 17430949 complement(2125875..2126057) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2126057 17430949 P423_10635 Escherichia coli JJ1886 hypothetical protein YP_008722151.1 2125875 R 1355100 CDS YP_008722152.1 556551941 17430950 complement(2126136..2127053) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2127053 17430950 P423_10640 Escherichia coli JJ1886 membrane protein YP_008722152.1 2126136 R 1355100 CDS YP_008722153.1 556551942 17430951 2127226..2128146 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2128146 17430951 P423_10645 Escherichia coli JJ1886 multidrug transporter YP_008722153.1 2127226 D 1355100 CDS YP_008722154.1 556551943 17430952 complement(2128135..2128605) 1 NC_022648.1 DNA mismatch endonuclease; recognizes and repairs T:G mismatches; Derived by automated computational analysis using gene prediction method: Protein Homology.; very short patch repair endonuclease 2128605 17430952 P423_10650 Escherichia coli JJ1886 very short patch repair endonuclease YP_008722154.1 2128135 R 1355100 CDS YP_008722155.1 556551944 17430953 complement(2128586..2130004) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-cytosine methyltransferase 2130004 17430953 P423_10655 Escherichia coli JJ1886 DNA-cytosine methyltransferase YP_008722155.1 2128586 R 1355100 CDS YP_008722156.1 556554597 17430954 complement(2130071..2130766) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2130766 17430954 P423_10660 Escherichia coli JJ1886 hypothetical protein YP_008722156.1 2130071 R 1355100 CDS YP_008722157.1 556554598 17430955 2131264..2131467 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2131467 17430955 P423_10665 Escherichia coli JJ1886 hypothetical protein YP_008722157.1 2131264 D 1355100 CDS YP_008722158.1 556551945 17430956 2131737..2132852 1 NC_022648.1 allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin protein C 2132852 17430956 P423_10670 Escherichia coli JJ1886 outer membrane porin protein C YP_008722158.1 2131737 D 1355100 CDS YP_008722159.1 556551946 17430957 2133445..2134296 1 NC_022648.1 Hsp31 stabilizes early unfolding protein intermediates under severe heat stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein HSP31 2134296 17430957 P423_10675 Escherichia coli JJ1886 heat shock protein HSP31 YP_008722159.1 2133445 D 1355100 CDS YP_008722160.1 556551947 17430958 complement(2134404..2135762) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor histidine kinase 2135762 17430958 P423_10680 Escherichia coli JJ1886 sensor histidine kinase YP_008722160.1 2134404 R 1355100 CDS YP_008722161.1 556551948 17430959 complement(2135762..2136481) 1 NC_022648.1 induced by CusR in the presence of copper; YedW induces the expression of the upstream gene yedV (encoding a sensor kinase) as well as yedW; yedVW is one of four copper regulons found in E. coli; part of the copper homeostasis mechanism; confers resistance to copper and several drugs when induced; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2136481 17430959 P423_10685 Escherichia coli JJ1886 transcriptional regulator YP_008722161.1 2135762 R 1355100 CDS YP_008722162.1 556551949 17430960 2136566..2136979 1 NC_022648.1 catalyzes the formation of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline from 5-hydroxyisourate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyisourate hydrolase 2136979 17430960 P423_10690 Escherichia coli JJ1886 hydroxyisourate hydrolase YP_008722162.1 2136566 D 1355100 CDS YP_008722163.1 556551950 17430961 2137088..2138092 1 NC_022648.1 in Escherichia coli this periplasmic enzyme was found to encode the periplasmic catalytic subunit of an oxidoreductase; requires inner membrane anchor protein YedZ; Derived by automated computational analysis using gene prediction method: Protein Homology.; TMAO/DMSO reductase 2138092 17430961 P423_10695 Escherichia coli JJ1886 TMAO/DMSO reductase YP_008722163.1 2137088 D 1355100 CDS YP_008722164.1 556551951 17430962 2138093..2138728 1 NC_022648.1 in Escherichia coli this inner membrane protein was found to anchor the periplasmic catalytic oxidoreductase YedY; sulfite oxidase activity not demonstrated; contains heme; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfite oxidase subunit YedZ 2138728 17430962 P423_10700 Escherichia coli JJ1886 sulfite oxidase subunit YedZ YP_008722164.1 2138093 D 1355100 CDS YP_008722165.1 556551952 17430963 complement(2138812..2139534) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2139534 17430963 P423_10705 Escherichia coli JJ1886 integrase YP_008722165.1 2138812 R 1355100 CDS YP_008722166.1 556554599 17430964 complement(2139639..2139812) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 2139812 17430964 P423_10710 Escherichia coli JJ1886 transposase YP_008722166.1 2139639 R 1355100 CDS YP_008722167.1 556554600 17430965 complement(2139917..2140105) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2140105 17430965 P423_10715 Escherichia coli JJ1886 hypothetical protein YP_008722167.1 2139917 R 1355100 CDS YP_008722168.1 556551953 17430966 2140421..2141071 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc/cadmium-binding protein 2141071 17430966 P423_10720 Escherichia coli JJ1886 zinc/cadmium-binding protein YP_008722168.1 2140421 D 1355100 CDS YP_008722169.1 556554601 17430967 complement(2142155..2142442) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2142442 17430967 P423_10725 Escherichia coli JJ1886 hypothetical protein YP_008722169.1 2142155 R 1355100 CDS YP_008722170.1 556554602 17430968 complement(2142453..2143157) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2143157 17430968 P423_10730 Escherichia coli JJ1886 hypothetical protein YP_008722170.1 2142453 R 1355100 CDS YP_008722171.1 556554603 17430969 complement(2143167..2143448) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2143448 17430969 P423_10735 Escherichia coli JJ1886 hypothetical protein YP_008722171.1 2143167 R 1355100 CDS YP_008722172.1 556551954 17430970 complement(2143448..2145826) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2145826 17430970 P423_10740 Escherichia coli JJ1886 tail protein YP_008722172.1 2143448 R 1355100 CDS YP_008722173.1 556554604 17430971 complement(2145947..2146405) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS200 2146405 17430971 P423_10745 Escherichia coli JJ1886 transposase IS200 YP_008722173.1 2145947 R 1355100 CDS YP_008722174.1 556551955 17430972 complement(2146602..2147201) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2147201 17430972 P423_10750 Escherichia coli JJ1886 hypothetical protein YP_008722174.1 2146602 R 1355100 CDS YP_008722175.1 556551956 17430973 complement(2147269..2150664) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host specificity protein J 2150664 17430973 P423_10755 Escherichia coli JJ1886 host specificity protein J YP_008722175.1 2147269 R 1355100 CDS YP_008722176.1 556551957 17430974 complement(2150725..2151273) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage tail assembly protein 2151273 17430974 P423_10760 Escherichia coli JJ1886 phage tail assembly protein YP_008722176.1 2150725 R 1355100 CDS YP_008722177.1 556551958 17430975 complement(2151270..2152013) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2152013 17430975 P423_10765 Escherichia coli JJ1886 tail protein YP_008722177.1 2151270 R 1355100 CDS YP_008722178.1 556551959 17430976 complement(2152019..2152717) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2152717 17430976 P423_10770 Escherichia coli JJ1886 tail protein YP_008722178.1 2152019 R 1355100 CDS YP_008722179.1 556551960 17430977 complement(2152717..2153058) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2153058 17430977 P423_10775 Escherichia coli JJ1886 tail protein YP_008722179.1 2152717 R 1355100 CDS YP_008722180.1 556551961 17430978 complement(2153051..2156278) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail length tape measure protein 2156278 17430978 P423_10780 Escherichia coli JJ1886 tail length tape measure protein YP_008722180.1 2153051 R 1355100 CDS YP_008722181.1 556551962 17430979 complement(2156325..2156603) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage tail protein 2156603 17430979 P423_10785 Escherichia coli JJ1886 phage tail protein YP_008722181.1 2156325 R 1355100 CDS YP_008722182.1 556551963 17430980 complement(2156627..2156998) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage tail protein 2156998 17430980 P423_10790 Escherichia coli JJ1886 phage tail protein YP_008722182.1 2156627 R 1355100 CDS YP_008722183.1 556551964 17430981 complement(2157013..2157717) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2157717 17430981 P423_10795 Escherichia coli JJ1886 tail protein YP_008722183.1 2157013 R 1355100 CDS YP_008722184.1 556551965 17430982 complement(2157778..2158122) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2158122 17430982 P423_10800 Escherichia coli JJ1886 hypothetical protein YP_008722184.1 2157778 R 1355100 CDS YP_008722185.1 556551966 17430983 complement(2158119..2158568) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2158568 17430983 P423_10805 Escherichia coli JJ1886 hypothetical protein YP_008722185.1 2158119 R 1355100 CDS YP_008722186.1 556551967 17430984 complement(2158565..2158903) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; head-tail adaptor protein 2158903 17430984 P423_10810 Escherichia coli JJ1886 head-tail adaptor protein YP_008722186.1 2158565 R 1355100 CDS YP_008722187.1 556551968 17430985 complement(2158912..2159229) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2159229 17430985 P423_10815 Escherichia coli JJ1886 hypothetical protein YP_008722187.1 2158912 R 1355100 CDS YP_008722188.1 556551969 17430986 complement(2159306..2160523) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phage capsid protein 2160523 17430986 P423_10820 Escherichia coli JJ1886 phage capsid protein YP_008722188.1 2159306 R 1355100 CDS YP_008722189.1 556551970 17430987 complement(2160538..2161137) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 2161137 17430987 P423_10825 Escherichia coli JJ1886 peptidase YP_008722189.1 2160538 R 1355100 CDS YP_008722190.1 556551971 17430988 complement(2161130..2162356) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2162356 17430988 P423_10830 Escherichia coli JJ1886 hypothetical protein YP_008722190.1 2161130 R 1355100 CDS YP_008722191.1 556554605 17430989 complement(2162346..2162507) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 2162507 17430989 P423_10835 Escherichia coli JJ1886 membrane protein YP_008722191.1 2162346 R 1355100 CDS YP_008722192.1 556551972 17430990 complement(2162504..2164261) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 2164261 17430990 P423_10840 Escherichia coli JJ1886 terminase YP_008722192.1 2162504 R 1355100 CDS YP_008722193.1 556554606 17430991 complement(2164261..2164581) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; terminase 2164581 17430991 P423_10845 Escherichia coli JJ1886 terminase YP_008722193.1 2164261 R 1355100 CDS YP_008722194.1 556551973 17430992 complement(2164891..2165241) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNAse 2165241 17430992 P423_10850 Escherichia coli JJ1886 DNAse YP_008722194.1 2164891 R 1355100 CDS YP_008722195.1 556551974 17430993 2165767..2166060 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2166060 17430993 P423_10855 Escherichia coli JJ1886 hypothetical protein YP_008722195.1 2165767 D 1355100 CDS YP_008722196.1 556551975 17430994 complement(2166092..2166553) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 2166553 17430994 P423_10860 Escherichia coli JJ1886 endopeptidase YP_008722196.1 2166092 R 1355100 CDS YP_008722197.1 556551976 17430995 complement(2166550..2167083) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 2167083 17430995 P423_10865 Escherichia coli JJ1886 lysozyme YP_008722197.1 2166550 R 1355100 CDS YP_008722198.1 556551977 17430996 complement(2167147..2167497) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2167497 17430996 P423_10870 Escherichia coli JJ1886 hypothetical protein YP_008722198.1 2167147 R 1355100 CDS YP_008722199.1 556551978 17430997 complement(2167502..2167717) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 2167717 17430997 P423_10875 Escherichia coli JJ1886 holin YP_008722199.1 2167502 R 1355100 CDS YP_008722200.1 556554607 17430998 complement(2168025..2168213) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2168213 17430998 P423_10880 Escherichia coli JJ1886 hypothetical protein YP_008722200.1 2168025 R 1355100 CDS YP_008722201.1 556551979 17430999 2168473..2168808 1 NC_022648.1 interacts RssB preventing the degradation of the stress sigma factor RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-adapter protein IraM 2168808 17430999 P423_10885 Escherichia coli JJ1886 anti-adapter protein IraM YP_008722201.1 2168473 D 1355100 CDS YP_008722202.1 556551980 17431000 complement(2169089..2169220) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2169220 17431000 P423_10890 Escherichia coli JJ1886 membrane protein YP_008722202.1 2169089 R 1355100 CDS YP_008722203.1 556554608 17431001 complement(2169256..2169534) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2169534 17431001 P423_10895 Escherichia coli JJ1886 hypothetical protein YP_008722203.1 2169256 R 1355100 CDS YP_008722204.1 556551981 17431004 complement(2170116..2170937) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitermination protein 2170937 17431004 P423_10910 Escherichia coli JJ1886 antitermination protein YP_008722204.1 2170116 R 1355100 CDS YP_008722205.1 556551982 17431005 complement(2170952..2171314) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endodeoxyribonuclease 2171314 17431005 P423_10915 Escherichia coli JJ1886 endodeoxyribonuclease YP_008722205.1 2170952 R 1355100 CDS YP_008722206.1 556551983 17431006 complement(2171315..2172346) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2172346 17431006 P423_10920 Escherichia coli JJ1886 hypothetical protein YP_008722206.1 2171315 R 1355100 CDS YP_008722207.1 556554609 17431007 2172594..2172773 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2172773 17431007 P423_10925 Escherichia coli JJ1886 hypothetical protein YP_008722207.1 2172594 D 1355100 CDS YP_008722208.1 556554610 17431008 complement(2173229..2173408) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 2173408 17431008 P423_10930 Escherichia coli JJ1886 membrane protein YP_008722208.1 2173229 R 1355100 CDS YP_008722209.1 556551984 17431009 complement(2173892..2174068) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2174068 17431009 P423_10935 Escherichia coli JJ1886 hypothetical protein YP_008722209.1 2173892 R 1355100 CDS YP_008722210.1 556554611 17431010 complement(2174061..2174243) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2174243 17431010 P423_10940 Escherichia coli JJ1886 hypothetical protein YP_008722210.1 2174061 R 1355100 CDS YP_008722211.1 556554612 17431011 complement(2174337..2174750) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2174750 17431011 P423_10945 Escherichia coli JJ1886 hypothetical protein YP_008722211.1 2174337 R 1355100 CDS YP_008722212.1 556554613 17431012 complement(2174751..2175173) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2175173 17431012 P423_10950 Escherichia coli JJ1886 hypothetical protein YP_008722212.1 2174751 R 1355100 CDS YP_008722213.1 556554614 17431013 complement(2175214..2176101) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 2176101 17431013 P423_10955 Escherichia coli JJ1886 DNA-binding protein YP_008722213.1 2175214 R 1355100 CDS YP_008722214.1 556554615 17431014 complement(2176199..2176624) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Rha family transcriptional regulator 2176624 17431014 P423_10960 Escherichia coli JJ1886 Rha family transcriptional regulator YP_008722214.1 2176199 R 1355100 CDS YP_008722215.1 556554616 17431015 complement(2176608..2176889) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2176889 17431015 P423_10965 Escherichia coli JJ1886 hypothetical protein YP_008722215.1 2176608 R 1355100 CDS YP_008722216.1 556554617 17431016 2176990..2177409 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; repressor 2177409 17431016 P423_10970 Escherichia coli JJ1886 repressor YP_008722216.1 2176990 D 1355100 CDS YP_008722217.1 556551985 17431017 2177594..2177830 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2177830 17431017 P423_10975 Escherichia coli JJ1886 hypothetical protein YP_008722217.1 2177594 D 1355100 CDS YP_008722218.1 556551986 17431018 2177832..2177960 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2177960 17431018 P423_10980 Escherichia coli JJ1886 hypothetical protein YP_008722218.1 2177832 D 1355100 CDS YP_008722219.1 556551987 17431019 2177990..2178208 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2178208 17431019 P423_10985 Escherichia coli JJ1886 hypothetical protein YP_008722219.1 2177990 D 1355100 CDS YP_008722220.1 556551988 17431020 2178776..2178964 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division inhibition protein DicB 2178964 17431020 P423_10990 Escherichia coli JJ1886 cell division inhibition protein DicB YP_008722220.1 2178776 D 1355100 CDS YP_008722221.1 556551989 17431021 2178961..2179152 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2179152 17431021 P423_10995 Escherichia coli JJ1886 hypothetical protein YP_008722221.1 2178961 D 1355100 CDS YP_008722222.1 556551990 17431022 2179245..2181716 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2181716 17431022 P423_11000 Escherichia coli JJ1886 hypothetical protein YP_008722222.1 2179245 D 1355100 CDS YP_008722223.1 556554618 17431023 2181775..2181978 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2181978 17431023 P423_11005 Escherichia coli JJ1886 hypothetical protein YP_008722223.1 2181775 D 1355100 CDS YP_008722224.1 556551991 17431024 2182158..2183003 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2183003 17431024 P423_11010 Escherichia coli JJ1886 integrase YP_008722224.1 2182158 D 1355100 CDS YP_008722225.1 556551992 17431026 2183200..2184036 1 NC_022648.1 Mlc anti-repressor; regulates ptsG by binding and inactivating Mlc; Derived by automated computational analysis using gene prediction method: Protein Homology.; DgsA anti-repressor MtfA 2184036 17431026 P423_11020 Escherichia coli JJ1886 DgsA anti-repressor MtfA YP_008722225.1 2183200 D 1355100 CDS YP_008722226.1 556551993 17431028 2184374..2185636 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2185636 17431028 P423_11030 Escherichia coli JJ1886 integrase YP_008722226.1 2184374 D 1355100 CDS YP_008722227.1 556554619 17431029 complement(2185830..2187134) 1 NC_022648.1 catalyzes the conversion of chorismate to salicylate in the biosynthesis of the siderophore yersiniabactin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; salicylate synthase 2187134 17431029 P423_11035 Escherichia coli JJ1886 salicylate synthase YP_008722227.1 2185830 R 1355100 CDS YP_008722228.1 556554620 17431030 complement(2187162..2188442) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MFS transporter 2188442 17431030 P423_11040 Escherichia coli JJ1886 MFS transporter YP_008722228.1 2187162 R 1355100 CDS YP_008722229.1 556554621 17431031 complement(2188435..2190237) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter permease 2190237 17431031 P423_11045 Escherichia coli JJ1886 ABC transporter permease YP_008722229.1 2188435 R 1355100 CDS YP_008722230.1 556551994 17431032 complement(2190224..2191936) 1 NC_022648.1 with TbpA and ThiP is part of the thiamine and TPP transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine ABC transporter ATP-binding protein 2191936 thiQ 17431032 thiQ Escherichia coli JJ1886 thiamine ABC transporter ATP-binding protein YP_008722230.1 2190224 R 1355100 CDS YP_008722231.1 556554622 17431033 2192193..2193152 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; AraC family transcriptional regulator 2193152 17431033 P423_11055 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008722231.1 2192193 D 1355100 CDS YP_008722232.1 556554623 17431034 2193343..2199450 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptide synthetase 2199450 17431034 P423_11060 Escherichia coli JJ1886 peptide synthetase YP_008722232.1 2193343 D 1355100 CDS YP_008722233.1 556554624 17431035 2199538..2209029 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; polyketide synthase 2209029 17431035 P423_11065 Escherichia coli JJ1886 polyketide synthase YP_008722233.1 2199538 D 1355100 CDS YP_008722234.1 556554625 17431036 2209026..2210126 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; oxidoreductase 2210126 17431036 P423_11070 Escherichia coli JJ1886 oxidoreductase YP_008722234.1 2209026 D 1355100 CDS YP_008722235.1 556554626 17431037 2210123..2210926 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; thioesterase 2210926 17431037 P423_11075 Escherichia coli JJ1886 thioesterase YP_008722235.1 2210123 D 1355100 CDS YP_008722236.1 556551995 17431038 2210930..2212507 1 NC_022648.1 bifunctional 2,3-dihydroxybenzoate-AMP ligase/S-dihydroxybenzoyltransferase; activates the carboxylate group of 2,3-dihydroxy-benzoate forming (2,3-dihydroxybenzoyl)adenylate then catalyzes the acylation of holo-entB with 2,3-dihydroxy-benzoate adenylate; Derived by automated computational analysis using gene prediction method: Protein Homology.; enterobactin synthase subunit E 2212507 entE 17431038 entE Escherichia coli JJ1886 enterobactin synthase subunit E YP_008722236.1 2210930 D 1355100 CDS YP_008722237.1 556554627 17431039 2212638..2214659 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ligand-gated channel protein 2214659 17431039 P423_11085 Escherichia coli JJ1886 ligand-gated channel protein YP_008722237.1 2212638 D 1355100 CDS YP_008722238.1 556554628 17431040 2215309..2216058 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2216058 17431040 P423_11090 Escherichia coli JJ1886 hypothetical protein YP_008722238.1 2215309 D 1355100 CDS YP_008722239.1 556554629 17431041 2216191..2217453 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2217453 17431041 P423_11095 Escherichia coli JJ1886 hypothetical protein YP_008722239.1 2216191 D 1355100 CDS YP_008722240.1 556554630 17431042 2217700..2218149 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; invasin 2218149 17431042 P423_11100 Escherichia coli JJ1886 invasin YP_008722240.1 2217700 D 1355100 CDS YP_008722241.1 556551996 17431043 complement(2218277..2219329) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2219329 17431043 P423_11105 Escherichia coli JJ1886 hypothetical protein YP_008722241.1 2218277 R 1355100 CDS YP_008722242.1 556551997 17431044 2219644..2220960 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate transporter 2220960 17431044 P423_11110 Escherichia coli JJ1886 shikimate transporter YP_008722242.1 2219644 D 1355100 CDS YP_008722243.1 556551998 17431045 2221062..2222516 1 NC_022648.1 Catalyzes the hydrolysis of AMP to form adenine and ribose 5-phosphate using water as the nucleophile; Derived by automated computational analysis using gene prediction method: Protein Homology.; AMP nucleosidase 2222516 17431045 P423_11115 Escherichia coli JJ1886 AMP nucleosidase YP_008722243.1 2221062 D 1355100 CDS YP_008722244.1 556551999 17431046 2222859..2223575 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2223575 17431046 P423_11120 Escherichia coli JJ1886 hypothetical protein YP_008722244.1 2222859 D 1355100 CDS YP_008722245.1 556552000 17431048 complement(2224205..2225692) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MATE family multidrug exporter 2225692 17431048 P423_11130 Escherichia coli JJ1886 MATE family multidrug exporter YP_008722245.1 2224205 R 1355100 CDS YP_008722246.1 556552001 17431050 complement(2225966..2226916) 1 NC_022648.1 LysR-type transcriptional regulator similar to CysB; contains helix-turn-helix (HTH) motif; in Escherichia coli this protein regulates two operons consisting of ABC transporters that are part of the cys regulon; regulated by CysB; DNA-binding transcriptional activator for the ssuEADCB and tauABCD operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; CysB family transcriptional regulator 2226916 cbl 17431050 cbl Escherichia coli JJ1886 CysB family transcriptional regulator YP_008722246.1 2225966 R 1355100 CDS YP_008722247.1 556552002 17431051 complement(2227018..2227935) 1 NC_022648.1 Transcriptional activator for the hut, put and ure operons and repressor for the gdh and gltB operons in response to nitrogen limitation; Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 2227935 17431051 P423_11145 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008722247.1 2227018 R 1355100 CDS YP_008722248.1 556552003 17431053 complement(2228393..2229325) 1 NC_022648.1 catalyzes th removal of D-alanine and attachment of the murein lipoprotein to the peptidoglycan tetrapeptide chain; Derived by automated computational analysis using gene prediction method: Protein Homology.; L,D-transpeptidase 2229325 17431053 P423_11155 Escherichia coli JJ1886 L,D-transpeptidase YP_008722248.1 2228393 R 1355100 CDS YP_008722249.1 556552004 17431054 complement(2229390..2230469) 1 NC_022648.1 catalyzes the synthesis of alpha-ribazole-5'-phosphate from nicotinate mononucleotide and 5,6-dimethylbenzimidazole; Derived by automated computational analysis using gene prediction method: Protein Homology.; nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase 2230469 cobT 17431054 cobT Escherichia coli JJ1886 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase YP_008722249.1 2229390 R 1355100 CDS YP_008722250.1 556552005 17431055 complement(2230481..2231224) 1 NC_022648.1 catalyzes the formation of adenosylcobalamin from Ado-cobinamide-GDP and alpha-ribazole; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalamin synthase 2231224 cobS 17431055 cobS Escherichia coli JJ1886 cobalamin synthase YP_008722250.1 2230481 R 1355100 CDS YP_008722251.1 556552006 17431056 complement(2231221..2231766) 1 NC_022648.1 catalyzes ATP-dependent phosphorylation of adenosylcobinamide to form adenosylcobinamide phosphate and the addition of guanosine monophosphate to adenosylcobinamide phosphate to form adenosylcobinamide-GDP; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosylcobinamide kinase 2231766 cobU 17431056 cobU Escherichia coli JJ1886 adenosylcobinamide kinase YP_008722251.1 2231221 R 1355100 CDS YP_008722252.1 556554631 17431057 complement(2232231..2232395) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2232395 17431057 P423_11175 Escherichia coli JJ1886 hypothetical protein YP_008722252.1 2232231 R 1355100 CDS YP_008722253.1 556552007 17431058 2233438..2235585 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ligand-gated channel 2235585 17431058 P423_11180 Escherichia coli JJ1886 ligand-gated channel YP_008722253.1 2233438 D 1355100 CDS YP_008722254.1 556554632 17431059 2235585..2235701 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2235701 17431059 P423_11185 Escherichia coli JJ1886 hypothetical protein YP_008722254.1 2235585 D 1355100 CDS YP_008722255.1 556552008 17431060 complement(2235956..2236600) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2236600 17431060 P423_11190 Escherichia coli JJ1886 hypothetical protein YP_008722255.1 2235956 R 1355100 CDS YP_008722256.1 556552009 17431061 complement(2236585..2237871) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2237871 17431061 P423_11195 Escherichia coli JJ1886 hypothetical protein YP_008722256.1 2236585 R 1355100 CDS YP_008722257.1 556554633 17431062 2239060..2239509 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2239509 17431062 P423_11200 Escherichia coli JJ1886 hypothetical protein YP_008722257.1 2239060 D 1355100 CDS YP_008722258.1 556552010 17431063 2239523..2240719 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2240719 17431063 P423_11205 Escherichia coli JJ1886 membrane protein YP_008722258.1 2239523 D 1355100 CDS YP_008722259.1 556554634 17431064 2240754..2241278 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2241278 17431064 P423_11210 Escherichia coli JJ1886 hypothetical protein YP_008722259.1 2240754 D 1355100 CDS YP_008722260.1 556552011 17431065 2241280..2242053 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2242053 17431065 P423_11215 Escherichia coli JJ1886 membrane protein YP_008722260.1 2241280 D 1355100 CDS YP_008722261.1 556554635 17431066 complement(2242674..2242835) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2242835 17431066 P423_11220 Escherichia coli JJ1886 hypothetical protein YP_008722261.1 2242674 R 1355100 CDS YP_008722262.1 556554636 17431067 2243055..2244269 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2244269 17431067 P423_11225 Escherichia coli JJ1886 hypothetical protein YP_008722262.1 2243055 D 1355100 CDS YP_008722263.1 556554637 17431068 2244283..2245041 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2245041 17431068 P423_11230 Escherichia coli JJ1886 hypothetical protein YP_008722263.1 2244283 D 1355100 CDS YP_008722264.1 556554638 17431069 2245095..2246060 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 2246060 17431069 P423_11235 Escherichia coli JJ1886 membrane protein YP_008722264.1 2245095 D 1355100 CDS YP_008722265.1 556554639 17431070 2246063..2247097 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphotriesterase 2247097 17431070 P423_11240 Escherichia coli JJ1886 phosphotriesterase YP_008722265.1 2246063 D 1355100 CDS YP_008722266.1 556554640 17431071 complement(2247137..2247250) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; gamma-glutamyltranspeptidase 2247250 17431071 P423_11245 Escherichia coli JJ1886 gamma-glutamyltranspeptidase YP_008722266.1 2247137 R 1355100 CDS YP_008722267.1 556554641 17431072 complement(2247749..2248117) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 2248117 17431072 P423_11250 Escherichia coli JJ1886 transposase YP_008722267.1 2247749 R 1355100 CDS YP_008722268.1 556554642 17431073 complement(2249412..2249822) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2249822 17431073 P423_11255 Escherichia coli JJ1886 hypothetical protein YP_008722268.1 2249412 R 1355100 CDS YP_008722269.1 556554643 17431074 complement(2249810..2250211) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2250211 17431074 P423_11260 Escherichia coli JJ1886 hypothetical protein YP_008722269.1 2249810 R 1355100 CDS YP_008722270.1 556552012 17431075 complement(2250377..2250946) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2250946 17431075 P423_11265 Escherichia coli JJ1886 hypothetical protein YP_008722270.1 2250377 R 1355100 CDS YP_008722271.1 556554644 17431076 complement(2251586..2251726) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2251726 17431076 P423_11270 Escherichia coli JJ1886 hypothetical protein YP_008722271.1 2251586 R 1355100 CDS YP_008722272.1 556554645 17431077 complement(2252061..2252294) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2252294 17431077 P423_11275 Escherichia coli JJ1886 hypothetical protein YP_008722272.1 2252061 R 1355100 CDS YP_008722273.1 556554646 17431078 2252526..2253722 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS110 2253722 17431078 P423_11280 Escherichia coli JJ1886 transposase IS110 YP_008722273.1 2252526 D 1355100 CDS YP_008722274.1 556554647 17431079 2253918..2254124 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Rha family transcriptional regulator 2254124 17431079 P423_11285 Escherichia coli JJ1886 Rha family transcriptional regulator YP_008722274.1 2253918 D 1355100 CDS YP_008722275.1 556554648 17431080 2254218..2254820 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2254820 17431080 P423_11290 Escherichia coli JJ1886 hypothetical protein YP_008722275.1 2254218 D 1355100 CDS YP_008722276.1 556554649 17431081 complement(2255846..2256538) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2256538 17431081 P423_11295 Escherichia coli JJ1886 hypothetical protein YP_008722276.1 2255846 R 1355100 CDS YP_008722277.1 556554650 17431082 complement(2256538..2257560) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS100 2257560 17431082 P423_11300 Escherichia coli JJ1886 transposase IS100 YP_008722277.1 2256538 R 1355100 CDS YP_008722278.1 556554651 17431083 2259058..2260230 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2260230 17431083 P423_11305 Escherichia coli JJ1886 hypothetical protein YP_008722278.1 2259058 D 1355100 CDS YP_008722279.1 556554652 17431084 complement(2260761..2261018) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2261018 17431084 P423_11310 Escherichia coli JJ1886 hypothetical protein YP_008722279.1 2260761 R 1355100 CDS YP_008722280.1 556554653 17431085 complement(2261072..2261839) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron ABC transporter 2261839 17431085 P423_11315 Escherichia coli JJ1886 iron ABC transporter YP_008722280.1 2261072 R 1355100 CDS YP_008722281.1 556554654 17431086 complement(2261836..2262894) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron-siderophore ABC transporter permease 2262894 17431086 P423_11320 Escherichia coli JJ1886 iron-siderophore ABC transporter permease YP_008722281.1 2261836 R 1355100 CDS YP_008722282.1 556554655 17431087 complement(2262913..2263902) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter substrate-binding protein 2263902 17431087 P423_11325 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008722282.1 2262913 R 1355100 CDS YP_008722283.1 556554656 17431088 complement(2263913..2265985) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; fatty-acid--CoA ligase 2265985 17431088 P423_11330 Escherichia coli JJ1886 fatty-acid--CoA ligase YP_008722283.1 2263913 R 1355100 CDS YP_008722284.1 556554657 17431089 2266507..2266941 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2266941 17431089 P423_11335 Escherichia coli JJ1886 hypothetical protein YP_008722284.1 2266507 D 1355100 CDS YP_008722285.1 556552013 17431090 2267159..2269543 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2269543 17431090 P423_11340 Escherichia coli JJ1886 hypothetical protein YP_008722285.1 2267159 D 1355100 CDS YP_008722286.1 556552014 17431091 2269540..2270445 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2270445 17431091 P423_11345 Escherichia coli JJ1886 hypothetical protein YP_008722286.1 2269540 D 1355100 CDS YP_008722287.1 556554658 17431092 2270442..2271512 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2271512 17431092 P423_11350 Escherichia coli JJ1886 hypothetical protein YP_008722287.1 2270442 D 1355100 CDS YP_008722288.1 556554659 17431093 2271648..2272061 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2272061 17431093 P423_11355 Escherichia coli JJ1886 hypothetical protein YP_008722288.1 2271648 D 1355100 CDS YP_008722289.1 556554660 17431094 2272401..2273717 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2273717 17431094 P423_11360 Escherichia coli JJ1886 hypothetical protein YP_008722289.1 2272401 D 1355100 CDS YP_008722290.1 556554661 17431095 2273732..2274478 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATP-binding protein 2274478 17431095 P423_11365 Escherichia coli JJ1886 ATP-binding protein YP_008722290.1 2273732 D 1355100 CDS YP_008722291.1 556552015 17431096 2274573..2274911 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2274911 17431096 P423_11370 Escherichia coli JJ1886 hypothetical protein YP_008722291.1 2274573 D 1355100 CDS YP_008722292.1 556552016 17431097 2274927..2275337 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2275337 17431097 P423_11375 Escherichia coli JJ1886 hypothetical protein YP_008722292.1 2274927 D 1355100 CDS YP_008722293.1 556552017 17431098 2275558..2276376 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2276376 17431098 P423_11380 Escherichia coli JJ1886 hypothetical protein YP_008722293.1 2275558 D 1355100 CDS YP_008722294.1 556552018 17431099 2276718..2277191 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2277191 17431099 P423_11385 Escherichia coli JJ1886 hypothetical protein YP_008722294.1 2276718 D 1355100 CDS YP_008722295.1 556552019 17431100 2277207..2277683 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2277683 17431100 P423_11390 Escherichia coli JJ1886 hypothetical protein YP_008722295.1 2277207 D 1355100 CDS YP_008722296.1 556552020 17431101 2277746..2277967 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2277967 17431101 P423_11395 Escherichia coli JJ1886 hypothetical protein YP_008722296.1 2277746 D 1355100 CDS YP_008722297.1 556554662 17431102 2277986..2278630 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; antitoxin of the YeeV-YeeU toxin-antitoxin system 2278630 17431102 P423_11400 Escherichia coli JJ1886 antitoxin of the YeeV-YeeU toxin-antitoxin system YP_008722297.1 2277986 D 1355100 CDS YP_008722298.1 556552021 17431103 2278646..2279014 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 2279014 17431103 P423_11405 Escherichia coli JJ1886 antitoxin YP_008722298.1 2278646 D 1355100 CDS YP_008722299.1 556552022 17431104 2279103..2279477 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 2279477 17431104 P423_11410 Escherichia coli JJ1886 toxin YP_008722299.1 2279103 D 1355100 CDS YP_008722300.1 556552023 17431105 2279474..2279668 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2279668 17431105 P423_11415 Escherichia coli JJ1886 hypothetical protein YP_008722300.1 2279474 D 1355100 CDS YP_008722301.1 556552024 17431106 complement(2280566..2280895) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2280895 17431106 P423_11420 Escherichia coli JJ1886 hypothetical protein YP_008722301.1 2280566 R 1355100 CDS YP_008722302.1 556552025 17431107 complement(2281067..2282125) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2282125 17431107 P423_11425 Escherichia coli JJ1886 membrane protein YP_008722302.1 2281067 R 1355100 CDS YP_008722303.1 556552026 17431108 complement(2282323..2282796) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase inhibitor 2282796 17431108 P423_11430 Escherichia coli JJ1886 DNA gyrase inhibitor YP_008722303.1 2282323 R 1355100 CDS YP_008722304.1 556552027 17431109 complement(2282915..2284081) 1 NC_022648.1 removes C-terminal D-alanyl residues from sugar-peptide cell wall precursors; penicillin-binding protein 6B; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 2284081 17431109 P423_11435 Escherichia coli JJ1886 D-alanyl-D-alanine carboxypeptidase YP_008722304.1 2282915 R 1355100 CDS YP_008722305.1 556552028 17431110 2284290..2285717 1 NC_022648.1 Exonucleolytic cleavage in the 3'- to 5'-direction to yield nucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease I 2285717 sbcB 17431110 sbcB Escherichia coli JJ1886 exonuclease I YP_008722305.1 2284290 D 1355100 CDS YP_008722306.1 556554663 17431111 complement(2285828..2286286) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS200 2286286 17431111 P423_11445 Escherichia coli JJ1886 transposase IS200 YP_008722306.1 2285828 R 1355100 CDS YP_008722307.1 556552029 17431112 complement(2286503..2287861) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine/spermidine ABC transporter 2287861 17431112 P423_11450 Escherichia coli JJ1886 putrescine/spermidine ABC transporter YP_008722307.1 2286503 R 1355100 CDS YP_008722308.1 556552030 17431113 complement(2288128..2289057) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 2289057 17431113 P423_11455 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008722308.1 2288128 R 1355100 CDS YP_008722309.1 556552031 17431114 complement(2289103..2289927) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2289927 17431114 P423_11460 Escherichia coli JJ1886 hypothetical protein YP_008722309.1 2289103 R 1355100 CDS YP_008722310.1 556552032 17431115 complement(2290010..2290264) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin YoeB 2290264 17431115 P423_11465 Escherichia coli JJ1886 toxin YoeB YP_008722310.1 2290010 R 1355100 CDS YP_008722311.1 556552033 17431116 complement(2290261..2290512) 1 NC_022648.1 Antitoxin that counteracts the effect of the YoeB toxin; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 2290512 17431116 P423_11470 Escherichia coli JJ1886 antitoxin YP_008722311.1 2290261 R 1355100 CDS YP_008722312.1 556552034 17431117 2290991..2291890 1 NC_022648.1 long form of enzyme; catalyzes the formation of N'-5'-phosphoribosyl-ATP from phosphoribosyl pyrophosphate; crucial role in histidine biosynthesis; forms active dimers and inactive hexamers which is dependent on concentration of substrates and inhibitors; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP phosphoribosyltransferase 2291890 hisG 17431117 hisG Escherichia coli JJ1886 ATP phosphoribosyltransferase YP_008722312.1 2290991 D 1355100 CDS YP_008722313.1 556552035 17431118 2291896..2293200 1 NC_022648.1 catalyzes the oxidation of L-histidinol to L-histidinaldehyde and then to L-histidine in histidine biosynthesis; functions as a dimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional histidinal dehydrogenase/ histidinol dehydrogenase 2293200 hisD 17431118 hisD Escherichia coli JJ1886 bifunctional histidinal dehydrogenase/ histidinol dehydrogenase YP_008722313.1 2291896 D 1355100 CDS YP_008722314.1 556552036 17431119 2293197..2294267 1 NC_022648.1 catalyzes the formation of L-histidinol phosphate from imidazole-acetol phosphate and glutamate in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidinol-phosphate aminotransferase 2294267 17431119 P423_11485 Escherichia coli JJ1886 histidinol-phosphate aminotransferase YP_008722314.1 2293197 D 1355100 CDS YP_008722315.1 556552037 17431120 2294267..2295334 1 NC_022648.1 catalyzes the formation of 3-(imidazol-4-yl)-2-oxopropyl phosphate from D-ethythro-1-(imidazol-4-yl)glycerol 3-phosphate and histidinol from histidinol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; imidazoleglycerol-phosphate dehydratase 2295334 17431120 P423_11490 Escherichia coli JJ1886 imidazoleglycerol-phosphate dehydratase YP_008722315.1 2294267 D 1355100 CDS YP_008722316.1 556552038 17431121 2295334..2295924 1 NC_022648.1 with HisF IGPS catalyzes the conversion of phosphoribulosyl-formimino-5-aminoimidazole-4-carboxamide ribonucleotide phosphate and glutamine to imidazole-glycerol phosphate, 5-aminoimidazol-4-carboxamide ribonucleotide, and glutamate in histidine biosynthesis; the HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of imidazole-glycerol phosphate and 5-aminoimidazol-4-carboxamide ribonucleotide; Derived by automated computational analysis using gene prediction method: Protein Homology.; imidazole glycerol phosphate synthase 2295924 hisH 17431121 hisH Escherichia coli JJ1886 imidazole glycerol phosphate synthase YP_008722316.1 2295334 D 1355100 CDS YP_008722317.1 556552039 17431122 2295924..2296661 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase 2296661 17431122 P423_11500 Escherichia coli JJ1886 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase YP_008722317.1 2295924 D 1355100 CDS YP_008722318.1 556552040 17431123 2296643..2297419 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; imidazole glycerol phosphate synthase 2297419 17431123 P423_11505 Escherichia coli JJ1886 imidazole glycerol phosphate synthase YP_008722318.1 2296643 D 1355100 CDS YP_008722319.1 556552041 17431124 2297413..2298024 1 NC_022648.1 catalyzes the formation of 1-(5-phosphoribosyl)-AMP from 1-(5-phosphoribosyl)-ATP and the subsequent formation of 1-(5-phosphoribosyl)-5-((5- phosphoribosylamino)methylideneamino)imidazole-4- carboxamide from 1-(5-phosphoribosyl)-AMP in histidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosyl-AMP cyclohydrolase 2298024 17431124 P423_11510 Escherichia coli JJ1886 phosphoribosyl-AMP cyclohydrolase YP_008722319.1 2297413 D 1355100 CDS YP_008722320.1 556552042 17431125 complement(2298210..2299187) 1 NC_022648.1 regulator of length of O-antigen component of lipopolysaccharide chains; Derived by automated computational analysis using gene prediction method: Protein Homology.; chain-length determining protein 2299187 17431125 P423_11515 Escherichia coli JJ1886 chain-length determining protein YP_008722320.1 2298210 R 1355100 CDS YP_008722321.1 556552043 17431126 complement(2299333..2300499) 1 NC_022648.1 catalyzes the formation of UDP-glucuronate from UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-glucose 6-dehydrogenase 2300499 17431126 P423_11520 Escherichia coli JJ1886 UDP-glucose 6-dehydrogenase YP_008722321.1 2299333 R 1355100 CDS YP_008722322.1 556552044 17431127 complement(2300746..2302152) 1 NC_022648.1 catalyzes the formation of D-ribulose 5-phosphate from 6-phospho-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconate dehydrogenase 2302152 17431127 P423_11525 Escherichia coli JJ1886 6-phosphogluconate dehydrogenase YP_008722322.1 2300746 R 1355100 CDS YP_008722323.1 556554664 17431128 complement(2302249..2303040) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2303040 17431128 P423_11530 Escherichia coli JJ1886 hypothetical protein YP_008722323.1 2302249 R 1355100 CDS YP_008722324.1 556554665 17431129 complement(2303042..2304142) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2304142 17431129 P423_11535 Escherichia coli JJ1886 hypothetical protein YP_008722324.1 2303042 R 1355100 CDS YP_008722325.1 556554666 17431130 complement(2304127..2304528) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2304528 17431130 P423_11540 Escherichia coli JJ1886 hypothetical protein YP_008722325.1 2304127 R 1355100 CDS YP_008722326.1 556554667 17431131 complement(2304803..2306020) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; intermembrane protein 2306020 17431131 P423_11545 Escherichia coli JJ1886 intermembrane protein YP_008722326.1 2304803 R 1355100 CDS YP_008722327.1 556554668 17431132 complement(2305992..2307071) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyltransferase 2307071 17431132 P423_11550 Escherichia coli JJ1886 glycosyltransferase YP_008722327.1 2305992 R 1355100 CDS YP_008722328.1 556554669 17431133 complement(2307203..2308168) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; rhamnosyl transferase 2308168 17431133 P423_11555 Escherichia coli JJ1886 rhamnosyl transferase YP_008722328.1 2307203 R 1355100 CDS YP_008722329.1 556554670 17431134 complement(2308173..2309444) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; flippase 2309444 17431134 P423_11560 Escherichia coli JJ1886 flippase YP_008722329.1 2308173 R 1355100 CDS YP_008722330.1 556552045 17431135 complement(2309434..2309976) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dTDP-4-dehydrorhamnose 3,5-epimerase 2309976 17431135 P423_11565 Escherichia coli JJ1886 dTDP-4-dehydrorhamnose 3,5-epimerase YP_008722330.1 2309434 R 1355100 CDS YP_008722331.1 556552046 17431136 complement(2309981..2310859) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphate thymidylyltransferase 2310859 17431136 P423_11570 Escherichia coli JJ1886 glucose-1-phosphate thymidylyltransferase YP_008722331.1 2309981 R 1355100 CDS YP_008722332.1 556552047 17431137 complement(2310917..2311816) 1 NC_022648.1 with dTDP-4-dehydrorhamnose 3,5-epimerase forms a complex known as dTDP-L-rhamnose synthetase; catalyzes the reduction of dTDP-4-dehydro-6-deoxy-L-mannose to dTDP-L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.; dTDP-4-dehydrorhamnose reductase 2311816 17431137 P423_11575 Escherichia coli JJ1886 dTDP-4-dehydrorhamnose reductase YP_008722332.1 2310917 R 1355100 CDS YP_008722333.1 556552048 17431138 complement(2311816..2312901) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dTDP-glucose 4,6-dehydratase 2312901 17431138 P423_11580 Escherichia coli JJ1886 dTDP-glucose 4,6-dehydratase YP_008722333.1 2311816 R 1355100 CDS YP_008722334.1 556552049 17431139 complement(2313274..2314167) 1 NC_022648.1 together with GalF subunit composes the UTP--glucose-1-phosphate uridylyltransferase, an enzyme that catalyzes the formation of UDP-glucose from UTP and alpha-D-glucose 1-phosphate; regulates cellular levels of UDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UTP--glucose-1-phosphate uridylyltransferase subunit GalU 2314167 17431139 P423_11585 Escherichia coli JJ1886 UTP--glucose-1-phosphate uridylyltransferase subunit GalU YP_008722334.1 2313274 R 1355100 CDS YP_008722335.1 556552050 17431140 complement(2314342..2315736) 1 NC_022648.1 WcaM from Salmonella enterica is essential for biofilm formation on HEp-2 cells and chicken intestinal tissue but not on a plastic surface; may be involved in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis protein 2315736 wcaM 17431140 wcaM Escherichia coli JJ1886 colanic acid biosynthesis protein YP_008722335.1 2314342 R 1355100 CDS YP_008722336.1 556552051 17431141 complement(2315747..2316967) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis glycosyltransferase WcaL 2316967 17431141 P423_11595 Escherichia coli JJ1886 colanic acid biosynthesis glycosyltransferase WcaL YP_008722336.1 2315747 R 1355100 CDS YP_008722337.1 556552052 17431142 complement(2316964..2318244) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis protein 2318244 17431142 P423_11600 Escherichia coli JJ1886 colanic acid biosynthesis protein YP_008722337.1 2316964 R 1355100 CDS YP_008722338.1 556552053 17431143 complement(2318713..2320191) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid exporter 2320191 17431143 P423_11605 Escherichia coli JJ1886 colanic acid exporter YP_008722338.1 2318713 R 1355100 CDS YP_008722339.1 556552054 17431144 complement(2320193..2321587) 1 NC_022648.1 WcaJ; glucose-1-phosphate transferase responsible for the addition of the first glucose-1-phosphate from UDP-glucose to the lipid carrier undecaprenyl phosphate in the biosynthesis of colanic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-glucose lipid carrier transferase 2321587 17431144 P423_11610 Escherichia coli JJ1886 UDP-glucose lipid carrier transferase YP_008722339.1 2320193 R 1355100 CDS YP_008722340.1 556552055 17431145 complement(2321643..2323013) 1 NC_022648.1 capsular polysaccharide biosynthesis protein; catalyzes the formation of D-mannose 6-phosphate from alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphomannomutase 2323013 17431145 P423_11615 Escherichia coli JJ1886 phosphomannomutase YP_008722340.1 2321643 R 1355100 CDS YP_008722341.1 556552056 17431146 complement(2323118..2324554) 1 NC_022648.1 capsular polysaccharide colanic acid biosynthesis protein; catalyzes the formation of GDP-mannose from GTP and alpha-D-mannose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannose-1-phosphate guanyltransferase 2324554 cpsB 17431146 cpsB Escherichia coli JJ1886 mannose-1-phosphate guanyltransferase YP_008722341.1 2323118 R 1355100 CDS YP_008722342.1 556552057 17431147 complement(2324557..2325780) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2325780 17431147 P423_11630 Escherichia coli JJ1886 glycosyl transferase YP_008722342.1 2324557 R 1355100 CDS YP_008722343.1 556552058 17431148 complement(2325777..2326259) 1 NC_022648.1 catalyzes the formation of GDP and D-mannose from GDP-D-mannose; also hydrolyzes GDP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-mannose mannosyl hydrolase NudD 2326259 17431148 P423_11635 Escherichia coli JJ1886 GDP-mannose mannosyl hydrolase NudD YP_008722343.1 2325777 R 1355100 CDS YP_008722344.1 556552059 17431149 complement(2326259..2327224) 1 NC_022648.1 bifunctional GDP-4-dehydro-6-deoxy-D-mannose epimerase/ GDP-4-dehydro-6-L-deoxygalactose reductase;catalyzes the formation of GDP-fucose from GDP-4-dehydro-6-deoxy-D-mannose; Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-fucose synthetase 2327224 17431149 P423_11640 Escherichia coli JJ1886 GDP-fucose synthetase YP_008722344.1 2326259 R 1355100 CDS YP_008722345.1 556552060 17431150 complement(2327227..2328348) 1 NC_022648.1 catalyzes the formation of GDP-4-dehydro-6-deoxy-D-mannose from GDP mannose; Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-mannose 4,6-dehydratase 2328348 17431150 P423_11645 Escherichia coli JJ1886 GDP-mannose 4,6-dehydratase YP_008722345.1 2327227 R 1355100 CDS YP_008722346.1 556552061 17431151 complement(2328375..2328923) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl transferase 2328923 17431151 P423_11650 Escherichia coli JJ1886 acyl transferase YP_008722346.1 2328375 R 1355100 CDS YP_008722347.1 556552062 17431152 complement(2328939..2329685) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2329685 17431152 P423_11655 Escherichia coli JJ1886 glycosyl transferase YP_008722347.1 2328939 R 1355100 CDS YP_008722348.1 556552063 17431153 complement(2329766..2330986) 1 NC_022648.1 essential for colanic acid biosynthesis; colanic acid is an exopolysaccharide produced under stress conditions that confers acid and heat tolerance; Derived by automated computational analysis using gene prediction method: Protein Homology.; colanic acid biosynthesis protein 2330986 wcaD 17431153 wcaD Escherichia coli JJ1886 colanic acid biosynthesis protein YP_008722348.1 2329766 R 1355100 CDS YP_008722349.1 556552064 17431154 complement(2330961..2332178) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2332178 17431154 P423_11665 Escherichia coli JJ1886 glycosyl transferase YP_008722349.1 2330961 R 1355100 CDS YP_008722350.1 556552065 17431155 complement(2332175..2332663) 1 NC_022648.1 acetyltransferase believed to catalyze the addition of the acetyl group that is attached through an O linkage to the first fucosyl residue of the colanic acid repetitive unit (E unit); wcaB is induced in sessile bacteria and by osmotic shock, and repressed when grown in rich medium; Derived by automated computational analysis using gene prediction method: Protein Homology.; acyl transferase 2332663 17431155 P423_11670 Escherichia coli JJ1886 acyl transferase YP_008722350.1 2332175 R 1355100 CDS YP_008722351.1 556552066 17431156 complement(2332666..2333505) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 2333505 17431156 P423_11675 Escherichia coli JJ1886 glycosyl transferase YP_008722351.1 2332666 R 1355100 CDS YP_008722352.1 556552067 17431157 complement(2333634..2335796) 1 NC_022648.1 Wzc; catalyzes the autophosphorylation on tyrosine residues which downregulates the biosynthesis of colonic acid (an extracellular polysaccharide); Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine kinase 2335796 17431157 P423_11680 Escherichia coli JJ1886 tyrosine kinase YP_008722352.1 2333634 R 1355100 CDS YP_008722353.1 556552068 17431158 complement(2335799..2336242) 1 NC_022648.1 Wzb shows phosphatase activity towards the autophosphorylated Wzc protein, which induces colanic acid biosynthesis; catalyzes the phosphorylation of UDP-glucose dehydrogenase, an enzyme involved in colanic acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-tyrosine phosphatase 2336242 17431158 P423_11685 Escherichia coli JJ1886 protein-tyrosine phosphatase YP_008722353.1 2335799 R 1355100 CDS YP_008722354.1 556552069 17431159 complement(2336248..2337387) 1 NC_022648.1 required for the translocation of capsular polysaccharide through the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; polysaccharide export protein Wza 2337387 17431159 P423_11690 Escherichia coli JJ1886 polysaccharide export protein Wza YP_008722354.1 2336248 R 1355100 CDS YP_008722355.1 556552070 17431160 2338047..2339630 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2339630 17431160 P423_11695 Escherichia coli JJ1886 membrane protein YP_008722355.1 2338047 D 1355100 CDS YP_008722356.1 556552071 17431161 complement(2340082..2341935) 1 NC_022648.1 YegA; inner membrane protein involved in the assembly of outer membrane proteins (OMPs); asmA-null mutants show low lipopolysaccharide (LPS) levels, suggesting a role in LPS biogenesis and/or in restricting outer membrane fluidity, resulting on altered assembly of OMPs; Derived by automated computational analysis using gene prediction method: Protein Homology.; assembly protein 2341935 17431161 P423_11700 Escherichia coli JJ1886 assembly protein YP_008722356.1 2340082 R 1355100 CDS YP_008722357.1 556552072 17431162 complement(2341957..2342538) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxycytidine triphosphate deaminase 2342538 17431162 P423_11705 Escherichia coli JJ1886 deoxycytidine triphosphate deaminase YP_008722357.1 2341957 R 1355100 CDS YP_008722358.1 556552073 17431163 complement(2342630..2343271) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uridine/cytidine kinase 2343271 17431163 P423_11710 Escherichia coli JJ1886 uridine/cytidine kinase YP_008722358.1 2342630 R 1355100 CDS YP_008722359.1 556552074 17431164 2343589..2346906 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 2346906 17431164 P423_11715 Escherichia coli JJ1886 diguanylate cyclase YP_008722359.1 2343589 D 1355100 CDS YP_008722360.1 556552075 17431165 complement(2347013..2347861) 1 NC_022648.1 inducible, catalyzes the hydrolysis of alkylated DNA, releasing 3-methyladenine, 3-methylguanine, 7-methylguanine and 7-methyladenine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-methyl-adenine DNA glycosylase 2347861 17431165 P423_11720 Escherichia coli JJ1886 3-methyl-adenine DNA glycosylase YP_008722360.1 2347013 R 1355100 CDS YP_008722361.1 556552076 17431166 2347995..2349347 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone 2349347 17431166 P423_11725 Escherichia coli JJ1886 chaperone YP_008722361.1 2347995 D 1355100 CDS YP_008722362.1 556552077 17431167 complement(2349360..2351300) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2351300 17431167 P423_11730 Escherichia coli JJ1886 hypothetical protein YP_008722362.1 2349360 R 1355100 CDS YP_008722363.1 556552078 17431168 complement(2351297..2352058) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2352058 17431168 P423_11735 Escherichia coli JJ1886 hypothetical protein YP_008722363.1 2351297 R 1355100 CDS YP_008722364.1 556552079 17431169 complement(2352055..2352714) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2352714 17431169 P423_11740 Escherichia coli JJ1886 hypothetical protein YP_008722364.1 2352055 R 1355100 CDS YP_008722365.1 556554671 17431170 2353279..2353425 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2353425 17431170 P423_11745 Escherichia coli JJ1886 hypothetical protein YP_008722365.1 2353279 D 1355100 CDS YP_008722366.1 556552080 17431171 2353595..2354842 1 NC_022648.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2354842 17431171 P423_11750 Escherichia coli JJ1886 multidrug transporter YP_008722366.1 2353595 D 1355100 CDS YP_008722367.1 556552081 17431172 2354842..2357964 1 NC_022648.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC which confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2357964 17431172 P423_11755 Escherichia coli JJ1886 multidrug transporter YP_008722367.1 2354842 D 1355100 CDS YP_008722368.1 556552082 17431173 2357965..2361042 1 NC_022648.1 Part of a tripartite efflux system composed of MdtA, MdtB and MdtC; confers resistance against novobiocin and deoxycholate; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2361042 17431173 P423_11760 Escherichia coli JJ1886 multidrug transporter YP_008722368.1 2357965 D 1355100 CDS YP_008722369.1 556552083 17431174 2361043..2362458 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2362458 17431174 P423_11765 Escherichia coli JJ1886 transporter YP_008722369.1 2361043 D 1355100 CDS YP_008722370.1 556552084 17431175 2362455..2363858 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; signal transduction histidine-protein kinase BaeS 2363858 17431175 P423_11770 Escherichia coli JJ1886 signal transduction histidine-protein kinase BaeS YP_008722370.1 2362455 D 1355100 CDS YP_008722371.1 556552085 17431176 2363855..2364577 1 NC_022648.1 response regulator in two-component regulatory system with BaeS; regulator of RNA synthesis, flagellar biosynthesis, chemotaxis and transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2364577 17431176 P423_11775 Escherichia coli JJ1886 transcriptional regulator YP_008722371.1 2363855 D 1355100 CDS YP_008722372.1 556552086 17431177 2364757..2365089 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2365089 17431177 P423_11780 Escherichia coli JJ1886 hypothetical protein YP_008722372.1 2364757 D 1355100 CDS YP_008722373.1 556552087 17431178 2365236..2366597 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 2366597 17431178 P423_11785 Escherichia coli JJ1886 protease YP_008722373.1 2365236 D 1355100 CDS YP_008722374.1 556554672 17431179 complement(2367097..2367414) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2367414 17431179 P423_11790 Escherichia coli JJ1886 hypothetical protein YP_008722374.1 2367097 R 1355100 CDS YP_008722375.1 556552088 17431180 2367829..2368728 1 NC_022648.1 cytosolic protein with phosphatidylglycerol kinase activity; undetermined physiological role; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid kinase 2368728 17431180 P423_11795 Escherichia coli JJ1886 lipid kinase YP_008722375.1 2367829 D 1355100 CDS YP_008722376.1 556552089 17431181 complement(2368810..2369583) 1 NC_022648.1 regulates genes involved in glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2369583 srlR 17431181 srlR Escherichia coli JJ1886 transcriptional regulator YP_008722376.1 2368810 R 1355100 CDS YP_008722377.1 556552090 17431182 complement(2369689..2370729) 1 NC_022648.1 Zn-dependent; NAD(P)-binding; catalyzes the formation of tagatose-6-phosphate from galactitol-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactitol-1-phosphate 5-dehydrogenase 2370729 17431182 P423_11805 Escherichia coli JJ1886 galactitol-1-phosphate 5-dehydrogenase YP_008722377.1 2369689 R 1355100 CDS YP_008722378.1 556552091 17431183 complement(2372135..2372419) 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIB 2372419 17431183 P423_11810 Escherichia coli JJ1886 PTS galactitol transporter subunit IIB YP_008722378.1 2372135 R 1355100 CDS YP_008722379.1 556552092 17431184 complement(2372450..2372902) 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIA 2372902 17431184 P423_11815 Escherichia coli JJ1886 PTS galactitol transporter subunit IIA YP_008722379.1 2372450 R 1355100 CDS YP_008722380.1 556552093 17431185 complement(2372912..2374174) 1 NC_022648.1 with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1,6-bisphosphate; subunit Z may act as a chaperone for the Y subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 2374174 17431185 P423_11820 Escherichia coli JJ1886 tagatose-bisphosphate aldolase YP_008722380.1 2372912 R 1355100 CDS YP_008722381.1 556552094 17431186 complement(2374203..2375057) 1 NC_022648.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 2375057 gatY 17431186 gatY Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008722381.1 2374203 R 1355100 CDS YP_008722382.1 556552095 17431187 complement(2375284..2376336) 1 NC_022648.1 catalyzes the formation of glycerone phosphate and D-glyceraldehyde 3-phosphate from D-fructose 1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 2376336 17431187 P423_11830 Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008722382.1 2375284 R 1355100 CDS YP_008722383.1 556552096 17431188 2376593..2377870 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside transporter 2377870 17431188 P423_11835 Escherichia coli JJ1886 nucleoside transporter YP_008722383.1 2376593 D 1355100 CDS YP_008722384.1 556552097 17431189 2377867..2378871 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2378871 17431189 P423_11840 Escherichia coli JJ1886 hypothetical protein YP_008722384.1 2377867 D 1355100 CDS YP_008722385.1 556552098 17431190 2378868..2379833 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 2379833 17431190 P423_11845 Escherichia coli JJ1886 sugar kinase YP_008722385.1 2378868 D 1355100 CDS YP_008722386.1 556552099 17431191 complement(2379807..2380553) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 2380553 17431191 P423_11850 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008722386.1 2379807 R 1355100 CDS YP_008722387.1 556552100 17431192 complement(2380605..2381423) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2381423 17431192 P423_11855 Escherichia coli JJ1886 hypothetical protein YP_008722387.1 2380605 R 1355100 CDS YP_008722388.1 556552101 17431193 complement(2381488..2382288) 1 NC_022648.1 catalyzes the formation hydroxymethylpyrimidine phosphate from hydroxymethylpyrimidine and the formation of of 4-amino-2-methyl-5-diphosphomethylpyrimidine from hydroxymethylpyrimidine phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase 2382288 17431193 P423_11860 Escherichia coli JJ1886 bifunctional hydroxy-methylpyrimidine kinase/ hydroxy-phosphomethylpyrimidine kinase YP_008722388.1 2381488 R 1355100 CDS YP_008722389.1 556552102 17431194 complement(2382285..2383073) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyethylthiazole kinase 2383073 17431194 P423_11865 Escherichia coli JJ1886 hydroxyethylthiazole kinase YP_008722389.1 2382285 R 1355100 CDS YP_008722390.1 556552103 17431195 complement(2383296..2383568) 1 NC_022648.1 DNA-binding; binds the RcnA promotor; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2383568 17431195 P423_11870 Escherichia coli JJ1886 transcriptional regulator YP_008722390.1 2383296 R 1355100 CDS YP_008722391.1 556552104 17431196 2383689..2384513 1 NC_022648.1 membrane protein conferring nickel and cobalt resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt transporter 2384513 17431196 P423_11875 Escherichia coli JJ1886 cobalt transporter YP_008722391.1 2383689 D 1355100 CDS YP_008722392.1 556552105 17431197 2384732..2385070 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel/cobalt homeostasis protein RcnB 2385070 17431197 P423_11880 Escherichia coli JJ1886 nickel/cobalt homeostasis protein RcnB YP_008722392.1 2384732 D 1355100 CDS YP_008722393.1 556554673 17431198 complement(2385152..2386186) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2386186 17431198 P423_11885 Escherichia coli JJ1886 hypothetical protein YP_008722393.1 2385152 R 1355100 CDS YP_008722394.1 556552106 17431199 complement(2386202..2388682) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial outer membrane usher protein 2388682 17431199 P423_11890 Escherichia coli JJ1886 fimbrial outer membrane usher protein YP_008722394.1 2386202 R 1355100 CDS YP_008722395.1 556552107 17431200 complement(2388698..2389372) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial assembly chaperone protein StcB 2389372 17431200 P423_11895 Escherichia coli JJ1886 fimbrial assembly chaperone protein StcB YP_008722395.1 2388698 R 1355100 CDS YP_008722396.1 556552108 17431201 complement(2389453..2389995) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2389995 17431201 P423_11900 Escherichia coli JJ1886 hypothetical protein YP_008722396.1 2389453 R 1355100 CDS YP_008722397.1 556552109 17431202 complement(2390288..2390569) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2390569 17431202 P423_11905 Escherichia coli JJ1886 hypothetical protein YP_008722397.1 2390288 R 1355100 CDS YP_008722398.1 556552110 17431203 complement(2390832..2391941) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATPase 2391941 17431203 P423_11910 Escherichia coli JJ1886 ATPase YP_008722398.1 2390832 R 1355100 CDS YP_008722399.1 556552111 17431204 2392073..2394106 1 NC_022648.1 methionine--tRNA ligase; MetRS; adds methionine to tRNA(Met) with cleavage of ATP to AMP and diphosphate; some MetRS enzymes form dimers depending on a C-terminal domain that is also found in other proteins such as Trbp111 in Aquifex aeolicus and the cold-shock protein CsaA from Bacillus subtilis while others do not; four subfamilies exist based on sequence motifs and zinc content; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionyl-tRNA synthetase 2394106 metG 17431204 metG Escherichia coli JJ1886 methionyl-tRNA synthetase YP_008722399.1 2392073 D 1355100 CDS YP_008722400.1 556554674 17431205 2394247..2398047 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; molybdate metabolism regulator 2398047 17431205 P423_11920 Escherichia coli JJ1886 molybdate metabolism regulator YP_008722400.1 2394247 D 1355100 CDS YP_008722401.1 556554675 17431206 2398060..2401821 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MolR family transcriptional regulator 2401821 17431206 P423_11925 Escherichia coli JJ1886 MolR family transcriptional regulator YP_008722401.1 2398060 D 1355100 CDS YP_008722402.1 556552112 17431207 2401831..2405463 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2405463 17431207 P423_11930 Escherichia coli JJ1886 hypothetical protein YP_008722402.1 2401831 D 1355100 CDS YP_008722403.1 556554676 17431208 complement(2406022..2406111) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2406111 17431208 P423_11935 Escherichia coli JJ1886 hypothetical protein YP_008722403.1 2406022 R 1355100 CDS YP_008722404.1 556552113 17431209 2406542..2407630 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2407630 17431209 P423_11940 Escherichia coli JJ1886 hypothetical protein YP_008722404.1 2406542 D 1355100 CDS YP_008722405.1 556552114 17431210 2407641..2409920 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2409920 17431210 P423_11945 Escherichia coli JJ1886 hypothetical protein YP_008722405.1 2407641 D 1355100 CDS YP_008722406.1 556552115 17431211 2409913..2411049 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2411049 17431211 P423_11950 Escherichia coli JJ1886 hypothetical protein YP_008722406.1 2409913 D 1355100 CDS YP_008722407.1 556552116 17431212 2411046..2413049 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2413049 17431212 P423_11955 Escherichia coli JJ1886 hypothetical protein YP_008722407.1 2411046 D 1355100 CDS YP_008722408.1 556552117 17431213 2413174..2413635 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2413635 17431213 P423_11960 Escherichia coli JJ1886 hypothetical protein YP_008722408.1 2413174 D 1355100 CDS YP_008722409.1 556552118 17431214 complement(2413676..2414146) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2414146 17431214 P423_11965 Escherichia coli JJ1886 hypothetical protein YP_008722409.1 2413676 R 1355100 CDS YP_008722410.1 556552119 17431215 complement(2414193..2414912) 1 NC_022648.1 unknown function; when overproduced it confers drug-resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2414912 17431215 P423_11970 Escherichia coli JJ1886 transcriptional regulator YP_008722410.1 2414193 R 1355100 CDS YP_008722411.1 556552120 17431216 complement(2414909..2416594) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor histidine kinase 2416594 17431216 P423_11975 Escherichia coli JJ1886 sensor histidine kinase YP_008722411.1 2414909 R 1355100 CDS YP_008722412.1 556552121 17431217 2416816..2417547 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MerR family transcriptional regulator 2417547 17431217 P423_11980 Escherichia coli JJ1886 MerR family transcriptional regulator YP_008722412.1 2416816 D 1355100 CDS YP_008722413.1 556552122 17431218 2417607..2417714 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2417714 17431218 P423_11985 Escherichia coli JJ1886 membrane protein YP_008722413.1 2417607 D 1355100 CDS YP_008722414.1 556552123 17431219 complement(2417695..2418426) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; osmoprotectant uptake system permease 2418426 17431219 P423_11990 Escherichia coli JJ1886 osmoprotectant uptake system permease YP_008722414.1 2417695 R 1355100 CDS YP_008722415.1 556552124 17431220 complement(2418431..2419357) 1 NC_022648.1 with ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter ATP-binding protein 2419357 17431220 P423_11995 Escherichia coli JJ1886 glycine/betaine ABC transporter ATP-binding protein YP_008722415.1 2418431 R 1355100 CDS YP_008722416.1 556552125 17431221 complement(2419350..2420507) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; osmoprotectant uptake system permease 2420507 17431221 P423_12000 Escherichia coli JJ1886 osmoprotectant uptake system permease YP_008722416.1 2419350 R 1355100 CDS YP_008722417.1 556552126 17431222 complement(2420514..2421431) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; osmoprotectant uptake system substrate-binding protein 2421431 17431222 P423_12005 Escherichia coli JJ1886 osmoprotectant uptake system substrate-binding protein YP_008722417.1 2420514 R 1355100 CDS YP_008722418.1 556552127 17431223 complement(2421621..2423918) 1 NC_022648.1 catalyzes the hydrolysis of terminal beta-D-glucosyl residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-glucoside glucohydrolase 2423918 17431223 P423_12010 Escherichia coli JJ1886 beta-D-glucoside glucohydrolase YP_008722418.1 2421621 R 1355100 CDS YP_008722419.1 556552128 17431224 2424114..2425829 1 NC_022648.1 component of the membrane-bound D-lactate oxidase, FAD-binding, NADH independent; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-lactate dehydrogenase 2425829 17431224 P423_12015 Escherichia coli JJ1886 D-lactate dehydrogenase YP_008722419.1 2424114 D 1355100 CDS YP_008722420.1 556552129 17431225 complement(2425868..2426800) 1 NC_022648.1 specifically hydrolyze the DD-diaminopimelate-alanine bonds in high-molecular-mass murein sacculi; Penicillin-binding protein 7; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine endopeptidase 2426800 pbpG 17431225 pbpG Escherichia coli JJ1886 D-alanyl-D-alanine endopeptidase YP_008722420.1 2425868 R 1355100 CDS YP_008722421.1 556552130 17431226 complement(2426974..2427561) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2427561 17431226 P423_12025 Escherichia coli JJ1886 membrane protein YP_008722421.1 2426974 R 1355100 CDS YP_008722422.1 556552131 17431227 2427731..2428309 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2428309 17431227 P423_12030 Escherichia coli JJ1886 membrane protein YP_008722422.1 2427731 D 1355100 CDS YP_008722423.1 556552132 17431228 complement(2428439..2429200) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 2429200 17431228 P423_12035 Escherichia coli JJ1886 oxidoreductase YP_008722423.1 2428439 R 1355100 CDS YP_008722424.1 556552133 17431229 complement(2429253..2430689) 1 NC_022648.1 may be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance outer membrane protein MdtQ 2430689 17431229 P423_12040 Escherichia coli JJ1886 multidrug resistance outer membrane protein MdtQ YP_008722424.1 2429253 R 1355100 CDS YP_008722425.1 556554677 17431230 2430913..2430996 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 2430996 17431230 P423_12045 Escherichia coli JJ1886 membrane protein YP_008722425.1 2430913 D 1355100 CDS YP_008722426.1 556552134 17431231 complement(2431384..2432400) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA-dihydrouridine synthase C 2432400 17431231 P423_12050 Escherichia coli JJ1886 tRNA-dihydrouridine synthase C YP_008722426.1 2431384 R 1355100 CDS YP_008722427.1 556552135 17431232 2432573..2432971 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2432971 17431232 P423_12055 Escherichia coli JJ1886 hypothetical protein YP_008722427.1 2432573 D 1355100 CDS YP_008722428.1 556552136 17431233 2432968..2433663 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2433663 17431233 P423_12060 Escherichia coli JJ1886 membrane protein YP_008722428.1 2432968 D 1355100 CDS YP_008722429.1 556552137 17431234 2433793..2434677 1 NC_022648.1 Reclaims exogenous and endogenous cytidine and 2'-deoxycytidine molecules for UMP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytidine deaminase 2434677 17431234 P423_12065 Escherichia coli JJ1886 cytidine deaminase YP_008722429.1 2433793 D 1355100 CDS YP_008722430.1 556552138 17431235 2434827..2435546 1 NC_022648.1 involved in vancomycin sensitivity and other barrier functions of the cell envelope; Derived by automated computational analysis using gene prediction method: Protein Homology.; vancomycin high temperature exclusion protein 2435546 17431235 P423_12070 Escherichia coli JJ1886 vancomycin high temperature exclusion protein YP_008722430.1 2434827 D 1355100 CDS YP_008722431.1 556552139 17431236 2435549..2435788 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2435788 17431236 P423_12075 Escherichia coli JJ1886 hypothetical protein YP_008722431.1 2435549 D 1355100 CDS YP_008722432.1 556552140 17431237 2435982..2437220 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropyrimidine dehydrogenase subunit A 2437220 17431237 P423_12080 Escherichia coli JJ1886 dihydropyrimidine dehydrogenase subunit A YP_008722432.1 2435982 D 1355100 CDS YP_008722433.1 556552141 17431238 2437214..2438449 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropyrimidine dehydrogenase subunit B 2438449 17431238 P423_12085 Escherichia coli JJ1886 dihydropyrimidine dehydrogenase subunit B YP_008722433.1 2437214 D 1355100 CDS YP_008722434.1 556552142 17431239 complement(2438692..2439702) 1 NC_022648.1 ABC transporter; functions in galactose transport; part of MglA2C2B transporter complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-methylgalactoside transporter 2439702 mglC 17431239 mglC Escherichia coli JJ1886 beta-methylgalactoside transporter YP_008722434.1 2438692 R 1355100 CDS YP_008722435.1 556552143 17431240 complement(2439718..2441238) 1 NC_022648.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter ATP binding protein 2441238 17431240 P423_12095 Escherichia coli JJ1886 D-ribose transporter ATP binding protein YP_008722435.1 2439718 R 1355100 CDS YP_008722436.1 556552144 17431241 complement(2441299..2442297) 1 NC_022648.1 wtih MglAC is involved in the transport of beta-methylgalactoside; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-galactoside ABC transporter substrate-binding protein 2442297 17431241 P423_12100 Escherichia coli JJ1886 methyl-galactoside ABC transporter substrate-binding protein YP_008722436.1 2441299 R 1355100 CDS YP_008722437.1 556552145 17431242 complement(2442577..2443617) 1 NC_022648.1 controls transcription of galETKM; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2443617 17431242 P423_12105 Escherichia coli JJ1886 transcriptional regulator YP_008722437.1 2442577 R 1355100 CDS YP_008722438.1 556552146 17431243 complement(2443759..2444916) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2444916 17431243 P423_12110 Escherichia coli JJ1886 membrane protein YP_008722438.1 2443759 R 1355100 CDS YP_008722439.1 556552147 17431244 complement(2444933..2445601) 1 NC_022648.1 involved in the first step of tetrahydrofolate biosynthesis; catalyzes the formation of formate and 2-amino-4-hydroxy-6-(erythro-1,2, 3-trihydroxypropyl)dihydropteridine triphosphate from GTP and water; forms a homopolymer; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP cyclohydrolase I 2445601 17431244 P423_12115 Escherichia coli JJ1886 GTP cyclohydrolase I YP_008722439.1 2444933 R 1355100 CDS YP_008722440.1 556552148 17431245 2445859..2446695 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-formylglutathione hydrolase 2446695 17431245 P423_12120 Escherichia coli JJ1886 S-formylglutathione hydrolase YP_008722440.1 2445859 D 1355100 CDS YP_008722441.1 556552149 17431246 complement(2446727..2448718) 1 NC_022648.1 Cir; FeuA; CirA; receptor protein for siderophores (colicin IA, IB and V) and microcins (E492, H47, and M); TonB-dependent; able to transport monomers, dimer, and linear trimers of 2,3-dihydorxybenzoylserine; outer membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; catecholate siderophore receptor CirA 2448718 17431246 P423_12125 Escherichia coli JJ1886 catecholate siderophore receptor CirA YP_008722441.1 2446727 R 1355100 CDS YP_008722442.1 556552150 17431247 complement(2449010..2450479) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine transporter 2450479 17431247 P423_12130 Escherichia coli JJ1886 lysine transporter YP_008722442.1 2449010 R 1355100 CDS YP_008722443.1 556552151 17431248 complement(2450684..2451565) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2451565 17431248 P423_12135 Escherichia coli JJ1886 transcriptional regulator YP_008722443.1 2450684 R 1355100 CDS YP_008722444.1 556552152 17431249 2451664..2452713 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2452713 17431249 P423_12140 Escherichia coli JJ1886 membrane protein YP_008722444.1 2451664 D 1355100 CDS YP_008722445.1 556552153 17431250 2452787..2453644 1 NC_022648.1 Assists in DNA repair by cleaving phosphodiester bonds at apurinic or apyrimidinic sties to produce new 5' ends that are base-free deoxyribose 5-phosphate residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease V 2453644 17431250 P423_12145 Escherichia coli JJ1886 endonuclease V YP_008722445.1 2452787 D 1355100 CDS YP_008722446.1 556552154 17431251 2453648..2454736 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbohydrate kinase 2454736 17431251 P423_12150 Escherichia coli JJ1886 carbohydrate kinase YP_008722446.1 2453648 D 1355100 CDS YP_008722447.1 556552155 17431252 complement(2455004..2455945) 1 NC_022648.1 Hydrolyzes cytidine or uridine to ribose and cytosine or uracil, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside hydrolase 2455945 rihB 17431252 rihB Escherichia coli JJ1886 ribonucleoside hydrolase YP_008722447.1 2455004 R 1355100 CDS YP_008722448.1 556552156 17431253 2456114..2456773 1 NC_022648.1 activator of nucleoside metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; Crp/Fnr family transcriptional regulator 2456773 17431253 P423_12160 Escherichia coli JJ1886 Crp/Fnr family transcriptional regulator YP_008722448.1 2456114 D 1355100 CDS YP_008722449.1 556552157 17431254 complement(2456840..2458090) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 2458090 17431254 P423_12165 Escherichia coli JJ1886 nucleoside permease YP_008722449.1 2456840 R 1355100 CDS YP_008722450.1 556552158 17431255 complement(2458184..2459122) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pseudouridine-5'-phosphate glycosidase 2459122 17431255 P423_12170 Escherichia coli JJ1886 pseudouridine-5'-phosphate glycosidase YP_008722450.1 2458184 R 1355100 CDS YP_008722451.1 556552159 17431256 complement(2459110..2460051) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pseudouridine kinase 2460051 17431256 P423_12175 Escherichia coli JJ1886 pseudouridine kinase YP_008722451.1 2459110 R 1355100 CDS YP_008722452.1 556552160 17431258 complement(2460507..2462198) 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIBC 2462198 17431258 P423_12185 Escherichia coli JJ1886 PTS fructose transporter subunit IIBC YP_008722452.1 2460507 R 1355100 CDS YP_008722453.1 556552161 17431259 complement(2462215..2463153) 1 NC_022648.1 converts fructose-1-phosphate and ATP to fructose-1,6-bisphosphate and ADP; highly specific for fructose-1-phopshate; similar to PfkB; forms homodimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-phosphofructokinase 2463153 fruK 17431259 fruK Escherichia coli JJ1886 1-phosphofructokinase YP_008722453.1 2462215 R 1355100 CDS YP_008722454.1 556552162 17431260 complement(2463153..2464283) 1 NC_022648.1 phosphoenolpyruvate (PEP)-dependent, sugar transporting phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIA is phosphorylated by phospho-HPr which then transfers the phosphoryl group to the IIB component; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 2464283 17431260 P423_12195 Escherichia coli JJ1886 PTS fructose transporter subunit IIA YP_008722454.1 2463153 R 1355100 CDS YP_008722455.1 556552163 17431261 2464651..2465832 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar transporter 2465832 17431261 P423_12200 Escherichia coli JJ1886 sugar transporter YP_008722455.1 2464651 D 1355100 CDS YP_008722456.1 556554678 17431262 complement(2465829..2466083) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2466083 17431262 P423_12205 Escherichia coli JJ1886 hypothetical protein YP_008722456.1 2465829 R 1355100 CDS YP_008722457.1 556552164 17431263 2466238..2466810 1 NC_022648.1 Stimulates the peptidyltransferase activity of the 70S ribosome and enhances dipeptide synthesis with N-formylmethionyl-tRNA and puromycin in vitro, suggesting its involvement in the formation of the first peptide bond of a protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor Ts 2466810 17431263 P423_12210 Escherichia coli JJ1886 elongation factor Ts YP_008722457.1 2466238 D 1355100 CDS YP_008722458.1 556552165 17431264 2467033..2468499 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 2468499 17431264 P423_12215 Escherichia coli JJ1886 D-mannonate oxidoreductase YP_008722458.1 2467033 D 1355100 CDS YP_008722459.1 556552166 17431265 2468617..2469603 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2469603 17431265 P423_12220 Escherichia coli JJ1886 hypothetical protein YP_008722459.1 2468617 D 1355100 CDS YP_008722460.1 556552167 17431266 2469642..2470355 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2470355 17431266 P423_12225 Escherichia coli JJ1886 membrane protein YP_008722460.1 2469642 D 1355100 CDS YP_008722461.1 556552168 17431267 2470767..2471333 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 2471333 17431267 P423_12230 Escherichia coli JJ1886 endopeptidase YP_008722461.1 2470767 D 1355100 CDS YP_008722462.1 556552169 17431268 2471514..2473070 1 NC_022648.1 involved in resistance to the phages N4 and lambda; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage resistance protein 2473070 17431268 P423_12235 Escherichia coli JJ1886 phage resistance protein YP_008722462.1 2471514 D 1355100 CDS YP_008722463.1 556552170 17431269 2473152..2474966 1 NC_022648.1 with YejBEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 2474966 17431269 P423_12240 Escherichia coli JJ1886 peptide ABC transporter substrate-binding protein YP_008722463.1 2473152 D 1355100 CDS YP_008722464.1 556552171 17431270 2474967..2476061 1 NC_022648.1 with YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin C ABC transporter permease YejB 2476061 17431270 P423_12245 Escherichia coli JJ1886 microcin C ABC transporter permease YejB YP_008722464.1 2474967 D 1355100 CDS YP_008722465.1 556552172 17431271 2476061..2477086 1 NC_022648.1 part of the microcin C transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin C ABC transporter permease 2477086 17431271 P423_12250 Escherichia coli JJ1886 microcin C ABC transporter permease YP_008722465.1 2476061 D 1355100 CDS YP_008722466.1 556552173 17431272 2477088..2478677 1 NC_022648.1 with YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology.; microcin C ABC transporter ATP-binding protein YejF 2478677 17431272 P423_12255 Escherichia coli JJ1886 microcin C ABC transporter ATP-binding protein YejF YP_008722466.1 2477088 D 1355100 CDS YP_008722467.1 556552174 17431273 complement(2478681..2479025) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2479025 17431273 P423_12260 Escherichia coli JJ1886 hypothetical protein YP_008722467.1 2478681 R 1355100 CDS YP_008722468.1 556552175 17431274 complement(2479359..2480549) 1 NC_022648.1 Involved in sulfonamide (sulfathiazole) and bicyclomycin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2480549 17431274 P423_12265 Escherichia coli JJ1886 multidrug transporter YP_008722468.1 2479359 R 1355100 CDS YP_008722469.1 556552176 17431275 complement(2480577..2481272) 1 NC_022648.1 catalyzes the synthesis pseudouridine from uracil-516 in 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA pseudouridylate synthase 2481272 17431275 P423_12270 Escherichia coli JJ1886 16S rRNA pseudouridylate synthase YP_008722469.1 2480577 R 1355100 CDS YP_008722470.1 556552177 17431276 2481422..2483182 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2483182 17431276 P423_12275 Escherichia coli JJ1886 hypothetical protein YP_008722470.1 2481422 D 1355100 CDS YP_008722471.1 556552178 17431277 2483307..2483591 1 NC_022648.1 the Ctc family of proteins consists of two types, one that contains the N-terminal ribosomal protein L25 domain only which in Escherichia coli binds the 5S rRNA while a subset of proteins contain a C-terminal extension that is involved in the stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L25 2483591 17431277 P423_12280 Escherichia coli JJ1886 50S ribosomal protein L25 YP_008722471.1 2483307 D 1355100 CDS YP_008722472.1 556552179 17431278 complement(2483730..2484737) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoid-associated protein NdpA 2484737 17431278 P423_12285 Escherichia coli JJ1886 nucleoid-associated protein NdpA YP_008722472.1 2483730 R 1355100 CDS YP_008722473.1 556552180 17431279 2484919..2485146 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2485146 17431279 P423_12290 Escherichia coli JJ1886 hypothetical protein YP_008722473.1 2484919 D 1355100 CDS YP_008722474.1 556552181 17431280 2485166..2486926 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2486926 17431280 P423_12295 Escherichia coli JJ1886 membrane protein YP_008722474.1 2485166 D 1355100 CDS YP_008722475.1 556554679 17431282 complement(2487179..2487427) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; autotransporter 2487427 17431282 P423_12305 Escherichia coli JJ1886 autotransporter YP_008722475.1 2487179 R 1355100 CDS YP_008722476.1 556554680 17431283 complement(2487430..2487819) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; autotransporter outer membrane protein 2487819 17431283 P423_12310 Escherichia coli JJ1886 autotransporter outer membrane protein YP_008722476.1 2487430 R 1355100 CDS YP_008722477.1 556552182 17431284 2488451..2489098 1 NC_022648.1 nitrate/nitrite response regulator NarP; NarP is phosphorylated by NarX and NarQ and can activate fdnG and nitrite or nitrate reductase systems; represses expression of other anaerobic genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2489098 17431284 P423_12315 Escherichia coli JJ1886 transcriptional regulator YP_008722477.1 2488451 D 1355100 CDS YP_008722478.1 556552183 17431285 complement(2489133..2490185) 1 NC_022648.1 cytochrome c-type biogenesis protein; involved in the attachment of heme to cytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme lyase subunit CcmH 2490185 17431285 P423_12320 Escherichia coli JJ1886 heme lyase subunit CcmH YP_008722478.1 2489133 R 1355100 CDS YP_008722479.1 556552184 17431286 complement(2490182..2490739) 1 NC_022648.1 cytochrome c-type biogenesis thioredoxin; involved in the reduction of disulfide bonds to allow heme bonding; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiol:disulfide interchange protein 2490739 17431286 P423_12325 Escherichia coli JJ1886 thiol:disulfide interchange protein YP_008722479.1 2490182 R 1355100 CDS YP_008722480.1 556552185 17431287 complement(2490736..2492679) 1 NC_022648.1 cytochrome c-type biogenesis protein; required for the transfer of heme to apocytochrome c; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme lyase subunit CcmF 2492679 17431287 P423_12330 Escherichia coli JJ1886 heme lyase subunit CcmF YP_008722480.1 2490736 R 1355100 CDS YP_008722481.1 556552186 17431288 complement(2492676..2493155) 1 NC_022648.1 CycJ; periplasmic heme chaperone that binds heme transiently via a histidine residue and delivers it to newly synthesized and exported c-type cytochromes; requires the ATP hydrolysis activity of the CcmA protein in order to transfer the heme to the apocytochrome; part of the cytochrome c maturation system; periplasmic protein anchored to the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C biogenesis protein 2493155 17431288 P423_12335 Escherichia coli JJ1886 cytochrome C biogenesis protein YP_008722481.1 2492676 R 1355100 CDS YP_008722482.1 556552187 17431289 complement(2493152..2493361) 1 NC_022648.1 is invovled in heme transfer during cytochrome c biogenesis; acts to stabilize CcmC and CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C biogenesis protein CcmD 2493361 17431289 P423_12340 Escherichia coli JJ1886 cytochrome C biogenesis protein CcmD YP_008722482.1 2493152 R 1355100 CDS YP_008722483.1 556552188 17431290 complement(2493358..2494095) 1 NC_022648.1 with CcmABDE is involved in the transport of protoheme IX; CcmC is required for heme transfer to CcmE; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter permease 2494095 17431290 P423_12345 Escherichia coli JJ1886 heme ABC transporter permease YP_008722483.1 2493358 R 1355100 CDS YP_008722484.1 556552189 17431291 complement(2494137..2494799) 1 NC_022648.1 with CcmABCE is involved in the transport of protoheme IX; CcmB is required for the release of holoCcmE from CcmC; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter permease 2494799 17431291 P423_12350 Escherichia coli JJ1886 heme ABC transporter permease YP_008722484.1 2494137 R 1355100 CDS YP_008722485.1 556552190 17431292 complement(2494796..2495413) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C biogenesis protein CcmA 2495413 17431292 P423_12355 Escherichia coli JJ1886 cytochrome C biogenesis protein CcmA YP_008722485.1 2494796 R 1355100 CDS YP_008722486.1 556552191 17431293 complement(2495432..2496034) 1 NC_022648.1 with NapABDFGH functions as a nitrate reductase; NapC functions as an electron shuttle between NapAB and NapGH or quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C protein NapC 2496034 17431293 P423_12360 Escherichia coli JJ1886 cytochrome C protein NapC YP_008722486.1 2495432 R 1355100 CDS YP_008722487.1 556552192 17431294 complement(2496044..2496493) 1 NC_022648.1 small subunit of periplasmic nitrate reductase; receives electrons from the membrane-bound NapC and passes them to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase cytochrome C550 subunit 2496493 napB 17431294 napB Escherichia coli JJ1886 nitrate reductase cytochrome C550 subunit YP_008722487.1 2496044 R 1355100 CDS YP_008722488.1 556552193 17431295 complement(2496490..2497353) 1 NC_022648.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinol dehydrogenase 2497353 napH 17431295 napH Escherichia coli JJ1886 quinol dehydrogenase YP_008722488.1 2496490 R 1355100 CDS YP_008722489.1 556552194 17431296 complement(2497340..2498035) 1 NC_022648.1 part of NapHG quinol dehydrogenase; couples electron transfer from ubiquinone-ubiquinol couple via NapC/B to NapA; secreted by twin arginine translocation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinol dehydrogenase 2498035 napG 17431296 napG Escherichia coli JJ1886 quinol dehydrogenase YP_008722489.1 2497340 R 1355100 CDS YP_008722490.1 556552195 17431297 complement(2498042..2500528) 1 NC_022648.1 periplasmic; catalytic subunit; with NapBC catalyzes the reduction of nitrate to nitrite; NapAB receives electrons from NapC; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase catalytic subunit 2500528 17431297 P423_12380 Escherichia coli JJ1886 nitrate reductase catalytic subunit YP_008722490.1 2498042 R 1355100 CDS YP_008722491.1 556552196 17431298 complement(2500525..2500788) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate reductase 2500788 17431298 P423_12385 Escherichia coli JJ1886 nitrate reductase YP_008722491.1 2500525 R 1355100 CDS YP_008722492.1 556552197 17431299 complement(2500778..2501272) 1 NC_022648.1 Predicted role in electron transfer to the periplasmic nitrate reductase protein NapA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 2501272 17431299 P423_12390 Escherichia coli JJ1886 ferredoxin YP_008722492.1 2500778 R 1355100 CDS YP_008722493.1 556552198 17431300 2501680..2502168 1 NC_022648.1 serine protease inhibitor, inhibits trypsin and other proteases; Derived by automated computational analysis using gene prediction method: Protein Homology.; ecotin 2502168 17431300 P423_12395 Escherichia coli JJ1886 ecotin YP_008722493.1 2501680 D 1355100 CDS YP_008722494.1 556552199 17431301 complement(2502318..2503964) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; malate:quinone oxidoreductase 2503964 17431301 P423_12400 Escherichia coli JJ1886 malate:quinone oxidoreductase YP_008722494.1 2502318 R 1355100 CDS YP_008722495.1 556552200 17431302 complement(2504182..2505825) 1 NC_022648.1 efflux pump for the antibacterial peptide microcin J25; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug ABC transporter ATP-binding protein 2505825 17431302 P423_12405 Escherichia coli JJ1886 multidrug ABC transporter ATP-binding protein YP_008722495.1 2504182 R 1355100 CDS YP_008722496.1 556552201 17431303 complement(2505901..2506551) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ketoglutarate-dependent dioxygenase 2506551 17431303 P423_12410 Escherichia coli JJ1886 alpha-ketoglutarate-dependent dioxygenase YP_008722496.1 2505901 R 1355100 CDS YP_008722497.1 556552202 17431304 complement(2506551..2507615) 1 NC_022648.1 regulates genes involved in the repair of alkylated DNA; repairs DNA containing 6-O-methylguanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2507615 17431304 P423_12415 Escherichia coli JJ1886 transcriptional regulator YP_008722497.1 2506551 R 1355100 CDS YP_008722498.1 556552203 17431305 complement(2507689..2508744) 1 NC_022648.1 catalyzes the conversion of aminoimidazole ribotide to the 4-amino-5-hydroxymethyl-2-methyl pyrimidine moiety of thiamine; involved in the maintenance and/or assembly of sulfur clusters; periplasmic lipoporotein anchored to the inner membrane; part of the thiamine pyrophosphate biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine biosynthesis lipoprotein ApbE 2508744 17431305 P423_12420 Escherichia coli JJ1886 thiamine biosynthesis lipoprotein ApbE YP_008722498.1 2507689 R 1355100 CDS YP_008722499.1 556552204 17431306 complement(2508856..2509977) 1 NC_022648.1 allows for ions and hydrophilic solutes to cross the outer membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin protein C 2509977 17431306 P423_12425 Escherichia coli JJ1886 outer membrane porin protein C YP_008722499.1 2508856 R 1355100 CDS YP_008722500.1 556552205 17431307 2510716..2513388 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphotransfer intermediate protein in two-component regulatory system with RcsBC 2513388 17431307 P423_12430 Escherichia coli JJ1886 phosphotransfer intermediate protein in two-component regulatory system with RcsBC YP_008722500.1 2510716 D 1355100 CDS YP_008722501.1 556552206 17431308 2513405..2514055 1 NC_022648.1 two-component response regulator RscB regulates the genes involved in capsule biosynthesis and cell division; probably phosphorylated by RcsC or RcsF; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2514055 17431308 P423_12435 Escherichia coli JJ1886 transcriptional regulator YP_008722501.1 2513405 D 1355100 CDS YP_008722502.1 556552207 17431309 complement(2514255..2517104) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 2517104 17431309 P423_12440 Escherichia coli JJ1886 sensory histidine kinase YP_008722502.1 2514255 R 1355100 CDS YP_008722503.1 556552208 17431310 2517271..2519097 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein ZraS 2519097 17431310 P423_12445 Escherichia coli JJ1886 sensor protein ZraS YP_008722503.1 2517271 D 1355100 CDS YP_008722504.1 556552209 17431311 2519094..2520479 1 NC_022648.1 DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetoacetate metabolism regulatory protein AtoC 2520479 17431311 P423_12450 Escherichia coli JJ1886 acetoacetate metabolism regulatory protein AtoC YP_008722504.1 2519094 D 1355100 CDS YP_008722505.1 556552210 17431312 2520675..2521337 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA:acetoacetyl-CoA transferase subunit alpha 2521337 17431312 P423_12455 Escherichia coli JJ1886 acetyl-CoA:acetoacetyl-CoA transferase subunit alpha YP_008722505.1 2520675 D 1355100 CDS YP_008722506.1 556552211 17431313 2521337..2521987 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyl-CoA:3-ketoacid-CoA transferase 2521987 17431313 P423_12460 Escherichia coli JJ1886 succinyl-CoA:3-ketoacid-CoA transferase YP_008722506.1 2521337 D 1355100 CDS YP_008722507.1 556552212 17431314 2521984..2523306 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; short-chain fatty acid transporter 2523306 17431314 P423_12465 Escherichia coli JJ1886 short-chain fatty acid transporter YP_008722507.1 2521984 D 1355100 CDS YP_008722508.1 556552213 17431315 2523337..2524521 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA acetyltransferase 2524521 17431315 P423_12470 Escherichia coli JJ1886 acetyl-CoA acetyltransferase YP_008722508.1 2523337 D 1355100 CDS YP_008722509.1 556552214 17431316 complement(2524595..2525371) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2525371 17431316 P423_12475 Escherichia coli JJ1886 hypothetical protein YP_008722509.1 2524595 R 1355100 CDS YP_008722510.1 556552215 17431317 complement(2525376..2527025) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2527025 17431317 P423_12480 Escherichia coli JJ1886 hypothetical protein YP_008722510.1 2525376 R 1355100 CDS YP_008722511.1 556554681 17431318 complement(2527026..2531489) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2531489 17431318 P423_12485 Escherichia coli JJ1886 hypothetical protein YP_008722511.1 2527026 R 1355100 CDS YP_008722512.1 556552216 17431319 complement(2531564..2532187) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2532187 17431319 P423_12490 Escherichia coli JJ1886 hypothetical protein YP_008722512.1 2531564 R 1355100 CDS YP_008722513.1 556552217 17431320 complement(2532184..2533872) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2533872 17431320 P423_12495 Escherichia coli JJ1886 hypothetical protein YP_008722513.1 2532184 R 1355100 CDS YP_008722514.1 556552218 17431321 complement(2534021..2536648) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase subunit A 2536648 17431321 P423_12500 Escherichia coli JJ1886 DNA gyrase subunit A YP_008722514.1 2534021 R 1355100 CDS YP_008722515.1 556552219 17431322 2536795..2537517 1 NC_022648.1 Involved in ubiquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase 2537517 17431322 P423_12505 Escherichia coli JJ1886 bifunctional 3-demethylubiquinone-9 3-methyltransferase/ 2-octaprenyl-6-hydroxy phenol methylase YP_008722515.1 2536795 D 1355100 CDS YP_008722516.1 556552220 17431323 complement(2537657..2541421) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adhesin 2541421 17431323 P423_12510 Escherichia coli JJ1886 adhesin YP_008722516.1 2537657 R 1355100 CDS YP_008722517.1 556552221 17431324 2542097..2544382 1 NC_022648.1 Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit alpha 2544382 17431324 P423_12515 Escherichia coli JJ1886 ribonucleotide-diphosphate reductase subunit alpha YP_008722517.1 2542097 D 1355100 CDS YP_008722518.1 556552222 17431325 2544471..2545601 1 NC_022648.1 B2 or R2 protein; type 1a enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit beta 2545601 17431325 P423_12520 Escherichia coli JJ1886 ribonucleotide-diphosphate reductase subunit beta YP_008722518.1 2544471 D 1355100 CDS YP_008722519.1 556552223 17431326 2545601..2545855 1 NC_022648.1 plays a role in maintenance and possibly the biosynthesis of diferric-tyrosyl radical cofactor, essential for nucleotide reduction catalyzed by ribonucleotide reductases; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2Fe-2S ferredoxin 2545855 17431326 P423_12525 Escherichia coli JJ1886 2Fe-2S ferredoxin YP_008722519.1 2545601 D 1355100 CDS YP_008722520.1 556552224 17431327 complement(2545909..2546559) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2546559 17431327 P423_12530 Escherichia coli JJ1886 hypothetical protein YP_008722520.1 2545909 R 1355100 CDS YP_008722521.1 556552225 17431328 complement(2546762..2547838) 1 NC_022648.1 hydrolyzes deacylated phospholipids to glycerol 3-phosphate and the corresponding alcohols; periplasmic; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerophosphodiester phosphodiesterase 2547838 glpQ 17431328 glpQ Escherichia coli JJ1886 glycerophosphodiester phosphodiesterase YP_008722521.1 2546762 R 1355100 CDS YP_008722522.1 556552226 17431329 complement(2547843..2549201) 1 NC_022648.1 catalyzes the uptake of glycerol-3-phosphate into the cell with the simultaneous export of inorganic phosphate from the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; sn-glycerol-3-phosphate transporter 2549201 glpT 17431329 glpT Escherichia coli JJ1886 sn-glycerol-3-phosphate transporter YP_008722522.1 2547843 R 1355100 CDS YP_008722523.1 556552227 17431330 2549474..2551102 1 NC_022648.1 anaerobic, catalyzes the conversion of glycerol 3-phosphate to dihydroxyacetone using fumarate or nitrate as electron acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; sn-glycerol-3-phosphate dehydrogenase subunit A 2551102 glpA 17431330 glpA Escherichia coli JJ1886 sn-glycerol-3-phosphate dehydrogenase subunit A YP_008722523.1 2549474 D 1355100 CDS YP_008722524.1 556552228 17431331 2551092..2552351 1 NC_022648.1 sn-glycerol-3-phosphate dehydrogenase (anaerobic); catalyzes the formation of dihydroxyacetone from glycerol 3-phosphate; part of GlpABC complex; presumably this subunit is responsible for membrane interactions and contains iron-sulfur clusters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate dehydrogenase subunit B 2552351 17431331 P423_12550 Escherichia coli JJ1886 glycerol-3-phosphate dehydrogenase subunit B YP_008722524.1 2551092 D 1355100 CDS YP_008722525.1 556552229 17431332 2552348..2553538 1 NC_022648.1 anaerobic; with GlpAB catalyzes the conversion of glycerol-3-phosphate to dihydroxyacetone phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sn-glycerol-3-phosphate dehydrogenase subunit C 2553538 glpC 17431332 glpC Escherichia coli JJ1886 sn-glycerol-3-phosphate dehydrogenase subunit C YP_008722525.1 2552348 D 1355100 CDS YP_008722526.1 556554682 17431333 2553563..2553688 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2553688 17431333 P423_12560 Escherichia coli JJ1886 hypothetical protein YP_008722526.1 2553563 D 1355100 CDS YP_008722527.1 556552230 17431334 2553731..2554726 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2554726 17431334 P423_12565 Escherichia coli JJ1886 hypothetical protein YP_008722527.1 2553731 D 1355100 CDS YP_008722528.1 556554683 17431335 2554739..2554960 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2554960 17431335 P423_12570 Escherichia coli JJ1886 hypothetical protein YP_008722528.1 2554739 D 1355100 CDS YP_008722529.1 556552231 17431336 complement(2555001..2555804) 1 NC_022648.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-dehydro-beta-deoxy-D-glucarate aldolase 2555804 17431336 P423_12575 Escherichia coli JJ1886 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_008722529.1 2555001 R 1355100 CDS YP_008722530.1 556552232 17431337 complement(2555822..2557111) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 2557111 17431337 P423_12580 Escherichia coli JJ1886 MFS transporter YP_008722530.1 2555822 R 1355100 CDS YP_008722531.1 556552233 17431338 complement(2557168..2558385) 1 NC_022648.1 catalyzes the formation of 2-keto-3-deoxy-L-rhamnonate from L-rhamnonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-rhamnonate dehydratase 2558385 17431338 P423_12585 Escherichia coli JJ1886 L-rhamnonate dehydratase YP_008722531.1 2557168 R 1355100 CDS YP_008722532.1 556552234 17431339 complement(2558388..2559170) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 2559170 17431339 P423_12590 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008722532.1 2558388 R 1355100 CDS YP_008722533.1 556552235 17431340 complement(2559390..2560592) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2560592 17431340 P423_12595 Escherichia coli JJ1886 hypothetical protein YP_008722533.1 2559390 R 1355100 CDS YP_008722534.1 556552236 17431341 complement(2560692..2561234) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2561234 17431341 P423_12600 Escherichia coli JJ1886 membrane protein YP_008722534.1 2560692 R 1355100 CDS YP_008722535.1 556552237 17431342 2561513..2561938 1 NC_022648.1 catalyzes the hydrolysis of nucleoside triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphatase NudI 2561938 17431342 P423_12605 Escherichia coli JJ1886 nucleoside triphosphatase NudI YP_008722535.1 2561513 D 1355100 CDS YP_008722536.1 556552238 17431343 complement(2561977..2562579) 1 NC_022648.1 catalyzes the of heptose(II) of the outer membrane lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptose(II)-phosphate phosphatase 2562579 17431343 P423_12610 Escherichia coli JJ1886 lipopolysaccharide core heptose(II)-phosphate phosphatase YP_008722536.1 2561977 R 1355100 CDS YP_008722537.1 556552239 17431344 2562887..2564026 1 NC_022648.1 catalyzes the conversion of UDP-4-keto-arabinose to UDP-4-amino-4-deoxy-L-arabinose; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase 2564026 17431344 P423_12615 Escherichia coli JJ1886 UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase YP_008722537.1 2562887 D 1355100 CDS YP_008722538.1 556552240 17431345 2564030..2564998 1 NC_022648.1 catalyzes the transfer of 4-deoxy-4-formamido-L-arabinose from UDP to undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase 2564998 17431345 P423_12620 Escherichia coli JJ1886 UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase YP_008722538.1 2564030 D 1355100 CDS YP_008722539.1 556552241 17431346 2564998..2566980 1 NC_022648.1 Bifunctional polymyxin resistance arnA protein; catalyzes the decarboxylation of UDP-glucuronic acid to UDP-4-keto-arabinose and the addition of a formyl group to UDP-4-amino-4-deoxy-L-arabinose to form UDP-L-4-formamido-arabinose; active in certain mutant strains; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase 2566980 17431346 P423_12625 Escherichia coli JJ1886 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase YP_008722539.1 2564998 D 1355100 CDS YP_008722540.1 556552242 17431347 2566977..2567867 1 NC_022648.1 catalyzes the formation of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase 2567867 17431347 P423_12630 Escherichia coli JJ1886 4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase YP_008722540.1 2566977 D 1355100 CDS YP_008722541.1 556552243 17431348 2567867..2569519 1 NC_022648.1 catalyzes the addition of 4-amino-4-deoxy-L-arabinose to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxy-L-arabinose transferase 2569519 arnT 17431348 arnT Escherichia coli JJ1886 4-amino-4-deoxy-L-arabinose transferase YP_008722541.1 2567867 D 1355100 CDS YP_008722542.1 556552244 17431349 2569516..2569851 1 NC_022648.1 with ArnE is involved in transporting 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasmic face to the periplasmic face of the inner membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E 2569851 17431349 P423_12640 Escherichia coli JJ1886 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit E YP_008722542.1 2569516 D 1355100 CDS YP_008722543.1 556552245 17431350 2569851..2570237 1 NC_022648.1 with ArnE is responsible for the transport of 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit F 2570237 17431350 P423_12645 Escherichia coli JJ1886 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase subunit F YP_008722543.1 2569851 D 1355100 CDS YP_008722544.1 556552246 17431351 complement(2570231..2570497) 1 NC_022648.1 with BasR regulates genes involved in polymyxin resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; signal transduction protein PmrD 2570497 17431351 P423_12650 Escherichia coli JJ1886 signal transduction protein PmrD YP_008722544.1 2570231 R 1355100 CDS YP_008722545.1 556552247 17431352 complement(2570607..2571962) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; O-succinylbenzoic acid--CoA ligase 2571962 17431352 P423_12655 Escherichia coli JJ1886 O-succinylbenzoic acid--CoA ligase YP_008722545.1 2570607 R 1355100 CDS YP_008722546.1 556552248 17431353 complement(2571959..2572921) 1 NC_022648.1 catalyzes the dehydration of 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid to form O-succinylbenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; O-succinylbenzoate synthase 2572921 17431353 P423_12660 Escherichia coli JJ1886 O-succinylbenzoate synthase YP_008722546.1 2571959 R 1355100 CDS YP_008722547.1 556552249 17431354 complement(2572921..2573778) 1 NC_022648.1 catalyzes the formation of 1,4-dihydroxy-2-naphthoate from O-succinylbenzoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxynaphthoic acid synthetase 2573778 17431354 P423_12665 Escherichia coli JJ1886 dihydroxynaphthoic acid synthetase YP_008722547.1 2572921 R 1355100 CDS YP_008722548.1 556552250 17431355 complement(2573793..2574551) 1 NC_022648.1 catalyzes the formation of (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate in menaquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase 2574551 17431355 P423_12670 Escherichia coli JJ1886 2-succinyl-6-hydroxy-2, 4-cyclohexadiene-1-carboxylate synthase YP_008722548.1 2573793 R 1355100 CDS YP_008722549.1 556552251 17431356 complement(2574548..2576218) 1 NC_022648.1 SEPHCHC synthase; forms 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1- carboxylate from 2-oxoglutarate and isochorismate in menaquinone biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase 2576218 17431356 P423_12675 Escherichia coli JJ1886 2-succinyl-5-enolpyruvyl-6-hydroxy-3- cyclohexene-1-carboxylate synthase YP_008722549.1 2574548 R 1355100 CDS YP_008722550.1 556552252 17431357 complement(2576307..2577602) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isochorismate synthase 2577602 17431357 P423_12680 Escherichia coli JJ1886 isochorismate synthase YP_008722550.1 2576307 R 1355100 CDS YP_008722551.1 556552253 17431358 complement(2577681..2577986) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2577986 17431358 P423_12685 Escherichia coli JJ1886 membrane protein YP_008722551.1 2577681 R 1355100 CDS YP_008722552.1 556552254 17431359 complement(2578041..2578502) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyltransferase 2578502 17431359 P423_12690 Escherichia coli JJ1886 acyltransferase YP_008722552.1 2578041 R 1355100 CDS YP_008722553.1 556552255 17431360 2578567..2579484 1 NC_022648.1 RNase BN; member of metallo-beta-lactamase family; the purified enzyme from Escherichia coli forms dimeric zinc phosphodiesterase; in Bacillus subtilis this protein is a 3'-tRNA processing endoribonuclease and is essential while in Escherichia coli it is not; associates with two zinc ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease Z 2579484 17431360 P423_12695 Escherichia coli JJ1886 ribonuclease Z YP_008722553.1 2578567 D 1355100 CDS YP_008722554.1 556554684 17431361 complement(2579605..2581347) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2581347 17431361 P423_12700 Escherichia coli JJ1886 hypothetical protein YP_008722554.1 2579605 R 1355100 CDS YP_008722555.1 556552256 17431362 2581485..2582456 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2582456 17431362 P423_12705 Escherichia coli JJ1886 hypothetical protein YP_008722555.1 2581485 D 1355100 CDS YP_008722556.1 556552257 17431363 2582559..2583062 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2583062 17431363 P423_12710 Escherichia coli JJ1886 hypothetical protein YP_008722556.1 2582559 D 1355100 CDS YP_008722557.1 556552258 17431364 complement(2583129..2584586) 1 NC_022648.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit N 2584586 17431364 P423_12715 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit N YP_008722557.1 2583129 R 1355100 CDS YP_008722558.1 556552259 17431365 complement(2584593..2586122) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit M 2586122 17431365 P423_12720 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit M YP_008722558.1 2584593 R 1355100 CDS YP_008722559.1 556552260 17431366 complement(2586286..2588127) 1 NC_022648.1 Catalyzes the transfer of electrons from NADH to ubiquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit L 2588127 17431366 P423_12725 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit L YP_008722559.1 2586286 R 1355100 CDS YP_008722560.1 556552261 17431367 complement(2588124..2588426) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit K 2588426 17431367 P423_12730 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit K YP_008722560.1 2588124 R 1355100 CDS YP_008722561.1 556552262 17431368 complement(2588423..2588977) 1 NC_022648.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit J 2588977 17431368 P423_12735 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit J YP_008722561.1 2588423 R 1355100 CDS YP_008722562.1 556552263 17431369 complement(2588989..2589531) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit I 2589531 17431369 P423_12740 Escherichia coli JJ1886 NADH dehydrogenase subunit I YP_008722562.1 2588989 R 1355100 CDS YP_008722563.1 556552264 17431370 complement(2589546..2590523) 1 NC_022648.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit H 2590523 17431370 P423_12745 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit H YP_008722563.1 2589546 R 1355100 CDS YP_008722564.1 556552265 17431371 complement(2590520..2593246) 1 NC_022648.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit G 2593246 17431371 P423_12750 Escherichia coli JJ1886 NADH dehydrogenase subunit G YP_008722564.1 2590520 R 1355100 CDS YP_008722565.1 556552266 17431372 complement(2593299..2594636) 1 NC_022648.1 part of NADH-ubiquinone oxidoreductase complex I; shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; NuoF is part of the soluble NADH dehydrogenase fragment, which represents the electron input part of NADH dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit F 2594636 17431372 P423_12755 Escherichia coli JJ1886 NADH dehydrogenase subunit F YP_008722565.1 2593299 R 1355100 CDS YP_008722566.1 556552267 17431373 complement(2594633..2595133) 1 NC_022648.1 Catalyzes the transfer of electrons from NADH to quinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit E 2595133 17431373 P423_12760 Escherichia coli JJ1886 NADH dehydrogenase subunit E YP_008722566.1 2594633 R 1355100 CDS YP_008722567.1 556552268 17431374 complement(2595136..2596938) 1 NC_022648.1 NuoCD; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain; subunits NuoCD, E, F, and G constitute the peripheral sector of the complex; in Escherichia coli this gene encodes a fusion protein of NuoC and NuoD that are found separate in other organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional NADH:ubiquinone oxidoreductase subunit C/D 2596938 17431374 P423_12765 Escherichia coli JJ1886 bifunctional NADH:ubiquinone oxidoreductase subunit C/D YP_008722567.1 2595136 R 1355100 CDS YP_008722568.1 556552269 17431375 complement(2597032..2597694) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH dehydrogenase subunit B 2597694 17431375 P423_12770 Escherichia coli JJ1886 NADH dehydrogenase subunit B YP_008722568.1 2597032 R 1355100 CDS YP_008722569.1 556552270 17431376 complement(2597710..2598153) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:ubiquinone oxidoreductase subunit A 2598153 17431376 P423_12775 Escherichia coli JJ1886 NADH:ubiquinone oxidoreductase subunit A YP_008722569.1 2597710 R 1355100 CDS YP_008722570.1 556552271 17431377 complement(2598783..2599721) 1 NC_022648.1 involved in the regulation of genes involved in flagella synthesis, motility and chemotaxis; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2599721 17431377 P423_12780 Escherichia coli JJ1886 transcriptional regulator YP_008722570.1 2598783 R 1355100 CDS YP_008722571.1 556552272 17431378 2600641..2601858 1 NC_022648.1 broad specificity; family IV; in Corynebacterium glutamicum this protein can use glutamate, 2-aminobutyrate, and aspartate as amino donors and pyruvate as the acceptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminotransferase AlaT 2601858 17431378 P423_12785 Escherichia coli JJ1886 aminotransferase AlaT YP_008722571.1 2600641 D 1355100 CDS YP_008722572.1 556552273 17431379 2601942..2602541 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 5'-nucleotidase 2602541 17431379 P423_12790 Escherichia coli JJ1886 5'-nucleotidase YP_008722572.1 2601942 D 1355100 CDS YP_008722573.1 556552274 17431380 complement(2602600..2604432) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; citrate transporter 2604432 17431380 P423_12795 Escherichia coli JJ1886 citrate transporter YP_008722573.1 2602600 R 1355100 CDS YP_008722574.1 556552275 17431381 complement(2604519..2605169) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatase 2605169 17431381 P423_12800 Escherichia coli JJ1886 phosphatase YP_008722574.1 2604519 R 1355100 CDS YP_008722575.1 556552276 17431382 complement(2605180..2605674) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2605674 17431382 P423_12805 Escherichia coli JJ1886 hypothetical protein YP_008722575.1 2605180 R 1355100 CDS YP_008722576.1 556552277 17431383 complement(2605757..2606212) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2606212 17431383 P423_12810 Escherichia coli JJ1886 membrane protein YP_008722576.1 2605757 R 1355100 CDS YP_008722577.1 556554685 17431384 complement(2606281..2606412) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2606412 17431384 P423_12815 Escherichia coli JJ1886 hypothetical protein YP_008722577.1 2606281 R 1355100 CDS YP_008722578.1 556552278 17431385 2606550..2607752 1 NC_022648.1 AckA utilizes acetate and can acetylate CheY which increases signal strength during flagellar rotation; utilizes magnesium and ATP; also involved in conversion of acetate to aceyl-CoA; also known to act on propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetate kinase 2607752 17431385 P423_12820 Escherichia coli JJ1886 acetate kinase YP_008722578.1 2606550 D 1355100 CDS YP_008722579.1 556552279 17431386 2607827..2609971 1 NC_022648.1 catalyzes the synthesis of acetylphosphate or propionylphosphate from acetyl-CoA or propionyl-CoA and inorganic phosphate; when using propionyl-CoA the enzyme is functioning in the anaerobic pathway catabolizing threonine to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate acetyltransferase 2609971 17431386 P423_12825 Escherichia coli JJ1886 phosphate acetyltransferase YP_008722579.1 2607827 D 1355100 CDS YP_008722580.1 556552280 17431387 2610161..2611681 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2611681 17431387 P423_12830 Escherichia coli JJ1886 membrane protein YP_008722580.1 2610161 D 1355100 CDS YP_008722581.1 556552281 17431388 complement(2611714..2612256) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NUDIX hydrolase 2612256 17431388 P423_12835 Escherichia coli JJ1886 NUDIX hydrolase YP_008722581.1 2611714 R 1355100 CDS YP_008722582.1 556552282 17431389 complement(2612314..2612865) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphodiesterase 2612865 17431389 P423_12840 Escherichia coli JJ1886 phosphodiesterase YP_008722582.1 2612314 R 1355100 CDS YP_008722583.1 556552283 17431390 complement(2612921..2613565) 1 NC_022648.1 catalyzes the formation of 2,4-dinitrophenyl-S-glutathione from 1-chloro-2,4-dinitrobenzene and glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione S-transferase 2613565 17431390 P423_12845 Escherichia coli JJ1886 glutathione S-transferase YP_008722583.1 2612921 R 1355100 CDS YP_008722584.1 556552284 17431391 2613701..2614348 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GSH-dependent disulfide bond oxidoreductase 2614348 17431391 P423_12850 Escherichia coli JJ1886 GSH-dependent disulfide bond oxidoreductase YP_008722584.1 2613701 D 1355100 CDS YP_008722585.1 556552285 17431392 2614405..2614767 1 NC_022648.1 catalyzes the formation of dihydromonapterin triphosphate from dihydroneopterin triphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase 2614767 folX 17431392 folX Escherichia coli JJ1886 D-erythro-7,8-dihydroneopterin triphosphate 2'-epimerase YP_008722585.1 2614405 D 1355100 CDS YP_008722586.1 556552286 17431393 2614788..2615681 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; epimerase 2615681 17431393 P423_12860 Escherichia coli JJ1886 epimerase YP_008722586.1 2614788 D 1355100 CDS YP_008722587.1 556552287 17431394 complement(2615840..2616613) 1 NC_022648.1 similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter ATP-binding protein 2616613 glnQ 17431394 glnQ Escherichia coli JJ1886 glutamine ABC transporter ATP-binding protein YP_008722587.1 2615840 R 1355100 CDS YP_008722588.1 556552288 17431395 complement(2616621..2617337) 1 NC_022648.1 with HisJPQ is involved in transport of histidine, lysine, arginine and ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine/lysine/arginine/ornithine ABC transporter permease HisM 2617337 17431395 P423_12870 Escherichia coli JJ1886 histidine/lysine/arginine/ornithine ABC transporter permease HisM YP_008722588.1 2616621 R 1355100 CDS YP_008722589.1 556552289 17431396 complement(2617334..2618020) 1 NC_022648.1 with HisJMP is involved in the transport of histidine/lysine/arginine/ornithine; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine/lysine/arginine/ornithine ABC transporter permease HisQ 2618020 17431396 P423_12875 Escherichia coli JJ1886 histidine/lysine/arginine/ornithine ABC transporter permease HisQ YP_008722589.1 2617334 R 1355100 CDS YP_008722590.1 556552290 17431397 complement(2618110..2618892) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter 2618892 17431397 P423_12880 Escherichia coli JJ1886 zinc transporter YP_008722590.1 2618110 R 1355100 CDS YP_008722591.1 556552291 17431398 complement(2619113..2619895) 1 NC_022648.1 with HisPMQ is involved in the transport of histidine; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 2619895 17431398 P423_12885 Escherichia coli JJ1886 amino acid ABC transporter substrate-binding protein YP_008722591.1 2619113 R 1355100 CDS YP_008722592.1 556552292 17431399 complement(2620161..2620730) 1 NC_022648.1 catalyzes the formation of 2-octaprenylphenol from 3-octaprenyl-4-hydroxybenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-octaprenyl-4-hydroxybenzoate carboxy-lyase 2620730 17431399 P423_12890 Escherichia coli JJ1886 3-octaprenyl-4-hydroxybenzoate carboxy-lyase YP_008722592.1 2620161 R 1355100 CDS YP_008722593.1 556552293 17431400 complement(2620825..2622342) 1 NC_022648.1 Catalyzes first step of the de novo purine nucleotide biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; amidophosphoribosyltransferase 2622342 17431400 P423_12895 Escherichia coli JJ1886 amidophosphoribosyltransferase YP_008722593.1 2620825 R 1355100 CDS YP_008722594.1 556552294 17431401 complement(2622379..2622867) 1 NC_022648.1 membrane protein required for colicin V production; Derived by automated computational analysis using gene prediction method: Protein Homology.; colicin V production protein 2622867 17431401 P423_12900 Escherichia coli JJ1886 colicin V production protein YP_008722594.1 2622379 R 1355100 CDS YP_008722595.1 556552295 17431402 complement(2623308..2623970) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein DedD 2623970 17431402 P423_12905 Escherichia coli JJ1886 cell division protein DedD YP_008722595.1 2623308 R 1355100 CDS YP_008722596.1 556552296 17431403 complement(2623960..2625228) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional folylpolyglutamate synthase/ dihydrofolate synthase 2625228 17431403 P423_12910 Escherichia coli JJ1886 bifunctional folylpolyglutamate synthase/ dihydrofolate synthase YP_008722596.1 2623960 R 1355100 CDS YP_008722597.1 556552297 17431404 complement(2625298..2626212) 1 NC_022648.1 catalyzes the carboxylation of acetyl-CoA to malonyl-CoA; forms a tetramer of AccA2D2 subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase subunit beta 2626212 17431404 P423_12915 Escherichia coli JJ1886 acetyl-CoA carboxylase subunit beta YP_008722597.1 2625298 R 1355100 CDS YP_008722598.1 556552298 17431405 complement(2626368..2627027) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2627027 17431405 P423_12920 Escherichia coli JJ1886 membrane protein YP_008722598.1 2626368 R 1355100 CDS YP_008722599.1 556552299 17431406 complement(2627110..2627922) 1 NC_022648.1 mediates pseudouridylation (positions 38, 39, 40) at the tRNA anticodon region which contributes to the structural stability; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase A 2627922 truA 17431406 truA Escherichia coli JJ1886 tRNA pseudouridine synthase A YP_008722599.1 2627110 R 1355100 CDS YP_008722600.1 556552300 17431407 complement(2627922..2628935) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; semialdehyde dehydrogenase 2628935 17431407 P423_12930 Escherichia coli JJ1886 semialdehyde dehydrogenase YP_008722600.1 2627922 R 1355100 CDS YP_008722601.1 556552301 17431408 complement(2629001..2630137) 1 NC_022648.1 catalyzes the formation of 3-hydroxy-2-oxo-4-phosphonooxybutanoate from erythronate-4-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; erythronate-4-phosphate dehydrogenase 2630137 17431408 P423_12935 Escherichia coli JJ1886 erythronate-4-phosphate dehydrogenase YP_008722601.1 2629001 R 1355100 CDS YP_008722602.1 556552302 17431409 2630236..2631231 1 NC_022648.1 in Salmonella typhimurium Flk regulates flagellar biosynthesis by inhibition of the flagellar-associated type III secretion system; lowers secretion levels of the anti-sigma28 factor FlgM to the periplasm; inner membrane-anchored protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; flagella biosynthesis regulator 2631231 flk 17431409 flk Escherichia coli JJ1886 flagella biosynthesis regulator YP_008722602.1 2630236 D 1355100 CDS YP_008722603.1 556552303 17431410 complement(2631228..2632406) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2632406 17431410 P423_12945 Escherichia coli JJ1886 transporter YP_008722603.1 2631228 R 1355100 CDS YP_008722604.1 556552304 17431411 complement(2632671..2633891) 1 NC_022648.1 FabB, beta-Ketoacyl-ACP synthase I, KASI; catalyzes a condensation reaction in fatty acid biosynthesis: addition of an acyl acceptor of two carbons from malonyl-ACP; required for the elongation of short-chain unsaturated acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-oxoacyl-ACP synthase 2633891 17431411 P423_12950 Escherichia coli JJ1886 3-oxoacyl-ACP synthase YP_008722604.1 2632671 R 1355100 CDS YP_008722605.1 556552305 17431412 2634050..2636056 1 NC_022648.1 5-methylaminomethyl-2-thiouridine-forming enzyme methyltransferase/FAD-dependent demodification enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 2636056 mnmC 17431412 mnmC Escherichia coli JJ1886 tRNA methyltransferase YP_008722605.1 2634050 D 1355100 CDS YP_008722606.1 556552306 17431413 complement(2636177..2636455) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2636455 17431413 P423_12960 Escherichia coli JJ1886 hypothetical protein YP_008722606.1 2636177 R 1355100 CDS YP_008722607.1 556552307 17431414 complement(2636489..2637037) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2637037 17431414 P423_12965 Escherichia coli JJ1886 hypothetical protein YP_008722607.1 2636489 R 1355100 CDS YP_008722608.1 556552308 17431415 complement(2637037..2637846) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2637846 17431415 P423_12970 Escherichia coli JJ1886 membrane protein YP_008722608.1 2637037 R 1355100 CDS YP_008722609.1 556552309 17431416 complement(2637846..2638670) 1 NC_022648.1 D-alanyl-D-alanine endopeptidase; functions in hydrolyzing cell wall peptidoglycan; similar to LAS metallopeptidases; forms a dimer in periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-insensitive murein endopeptidase 2638670 mepA 17431416 mepA Escherichia coli JJ1886 penicillin-insensitive murein endopeptidase YP_008722609.1 2637846 R 1355100 CDS YP_008722610.1 556552310 17431417 complement(2638674..2639759) 1 NC_022648.1 catalyzes the formation of chorismate from 5-O-(1-carboxyvinyl)-3-phosphoshikimate in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; chorismate synthase 2639759 17431417 P423_12980 Escherichia coli JJ1886 chorismate synthase YP_008722610.1 2638674 R 1355100 CDS YP_008722611.1 556552311 17431418 complement(2639794..2640726) 1 NC_022648.1 involved in methylation of ribosomal protein L3; Derived by automated computational analysis using gene prediction method: Protein Homology.; N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase 2640726 17431418 P423_12985 Escherichia coli JJ1886 N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase YP_008722611.1 2639794 R 1355100 CDS YP_008722612.1 556552312 17431419 2640892..2641443 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase S10 2641443 17431419 P423_12990 Escherichia coli JJ1886 peptidase S10 YP_008722612.1 2640892 D 1355100 CDS YP_008722613.1 556552313 17431420 complement(2641503..2642318) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2642318 17431420 P423_12995 Escherichia coli JJ1886 fimbrial protein YP_008722613.1 2641503 R 1355100 CDS YP_008722614.1 556552314 17431421 complement(2642329..2642856) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2642856 17431421 P423_13000 Escherichia coli JJ1886 fimbrial protein YP_008722614.1 2642329 R 1355100 CDS YP_008722615.1 556552315 17431422 complement(2642853..2643332) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein SteE 2643332 17431422 P423_13005 Escherichia coli JJ1886 fimbrial protein SteE YP_008722615.1 2642853 R 1355100 CDS YP_008722616.1 556552316 17431423 complement(2643329..2643820) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2643820 17431423 P423_13010 Escherichia coli JJ1886 hypothetical protein YP_008722616.1 2643329 R 1355100 CDS YP_008722617.1 556552317 17431424 complement(2643837..2644589) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein StfD 2644589 17431424 P423_13015 Escherichia coli JJ1886 fimbrial protein StfD YP_008722617.1 2643837 R 1355100 CDS YP_008722618.1 556552318 17431425 complement(2644609..2647257) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein SteB 2647257 17431425 P423_13020 Escherichia coli JJ1886 fimbrial protein SteB YP_008722618.1 2644609 R 1355100 CDS YP_008722619.1 556552319 17431426 complement(2647338..2647904) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 2647904 17431426 P423_13025 Escherichia coli JJ1886 fimbrial protein YP_008722619.1 2647338 R 1355100 CDS YP_008722620.1 556552320 17431427 complement(2648463..2648948) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphohistidine phosphatase 2648948 17431427 P423_13030 Escherichia coli JJ1886 phosphohistidine phosphatase YP_008722620.1 2648463 R 1355100 CDS YP_008722621.1 556552321 17431428 complement(2649151..2651295) 1 NC_022648.1 multifunctional enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase/3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities: forms a heterotetramer with FadI; similar to FadA2B2 complex; involved in the anaerobic degradation of long and medium-chain fatty acids in the presence of nitrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fatty-acid oxidation protein subunit alpha 2651295 fadJ 17431428 fadJ Escherichia coli JJ1886 fatty-acid oxidation protein subunit alpha YP_008722621.1 2649151 R 1355100 CDS YP_008722622.1 556552322 17431429 complement(2651295..2652605) 1 NC_022648.1 FadI; fatty acid oxidation complex component beta; functions in a heterotetramer with FadJ; similar to FadA2B2 complex; functions in beta-oxidation of fatty acids during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-CoA thiolase 2652605 fadI 17431429 fadI Escherichia coli JJ1886 3-ketoacyl-CoA thiolase YP_008722622.1 2651295 R 1355100 CDS YP_008722623.1 556552323 17431430 complement(2652786..2653070) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2653070 17431430 P423_13045 Escherichia coli JJ1886 hypothetical protein YP_008722623.1 2652786 R 1355100 CDS YP_008722624.1 556552324 17431431 2653442..2654782 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; long-chain fatty acid outer membrane transporter 2654782 17431431 P423_13050 Escherichia coli JJ1886 long-chain fatty acid outer membrane transporter YP_008722624.1 2653442 D 1355100 CDS YP_008722625.1 556552325 17431432 complement(2654844..2655599) 1 NC_022648.1 involved in maintaining OM lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2655599 17431432 P423_13055 Escherichia coli JJ1886 membrane protein YP_008722625.1 2654844 R 1355100 CDS YP_008722626.1 556552326 17431433 2655893..2656825 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2656825 17431433 P423_13060 Escherichia coli JJ1886 membrane protein YP_008722626.1 2655893 D 1355100 CDS YP_008722627.1 556552327 17431435 2657205..2658311 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 2658311 17431435 P423_13070 Escherichia coli JJ1886 integrase YP_008722627.1 2657205 D 1355100 CDS YP_008722628.1 556554686 17431436 complement(2658291..2659241) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2659241 17431436 P423_13075 Escherichia coli JJ1886 hypothetical protein YP_008722628.1 2658291 R 1355100 CDS YP_008722629.1 556554687 17431437 complement(2659263..2660144) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2660144 17431437 P423_13080 Escherichia coli JJ1886 hypothetical protein YP_008722629.1 2659263 R 1355100 CDS YP_008722630.1 556552328 17431438 complement(2660698..2662269) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 2662269 17431438 P423_13085 Escherichia coli JJ1886 transposase IS66 YP_008722630.1 2660698 R 1355100 CDS YP_008722631.1 556552329 17431439 complement(2662342..2662692) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 2662692 17431439 P423_13090 Escherichia coli JJ1886 isocitrate lyase YP_008722631.1 2662342 R 1355100 CDS YP_008722632.1 556554688 17431440 complement(2662689..2663114) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 2663114 17431440 P423_13095 Escherichia coli JJ1886 transposase YP_008722632.1 2662689 R 1355100 CDS YP_008722633.1 556554689 17431441 2663168..2663356 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2663356 17431441 P423_13100 Escherichia coli JJ1886 hypothetical protein YP_008722633.1 2663168 D 1355100 CDS YP_008722634.1 556554690 17431442 2663452..2663688 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS66 2663688 17431442 P423_13105 Escherichia coli JJ1886 transposase IS66 YP_008722634.1 2663452 D 1355100 CDS YP_008722635.1 556552330 17431443 complement(2663943..2664215) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2664215 17431443 P423_13110 Escherichia coli JJ1886 transcriptional regulator YP_008722635.1 2663943 R 1355100 CDS YP_008722636.1 556554691 17431444 complement(2664498..2667185) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; alkaline-shock protein 2667185 17431444 P423_13115 Escherichia coli JJ1886 alkaline-shock protein YP_008722636.1 2664498 R 1355100 CDS YP_008722637.1 556554692 17431445 complement(2667182..2667592) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2667592 17431445 P423_13120 Escherichia coli JJ1886 hypothetical protein YP_008722637.1 2667182 R 1355100 CDS YP_008722638.1 556554693 17431446 complement(2667585..2667821) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2667821 17431446 P423_13125 Escherichia coli JJ1886 hypothetical protein YP_008722638.1 2667585 R 1355100 CDS YP_008722639.1 556552331 17431447 complement(2667818..2668408) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CI repressor 2668408 17431447 P423_13130 Escherichia coli JJ1886 CI repressor YP_008722639.1 2667818 R 1355100 CDS YP_008722640.1 556552332 17431448 complement(2668496..2669500) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 2669500 17431448 P423_13135 Escherichia coli JJ1886 oxidoreductase YP_008722640.1 2668496 R 1355100 CDS YP_008722641.1 556554694 17431449 complement(2669523..2670383) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2670383 17431449 P423_13140 Escherichia coli JJ1886 hypothetical protein YP_008722641.1 2669523 R 1355100 CDS YP_008722642.1 556552333 17431450 complement(2670401..2670628) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AlpA family transcriptional regulator 2670628 17431450 P423_13145 Escherichia coli JJ1886 AlpA family transcriptional regulator YP_008722642.1 2670401 R 1355100 CDS YP_008722643.1 556552334 17431451 complement(2671203..2672138) 1 NC_022648.1 regulates the synthesis and expression of the dsdXA operon and dadA gene; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2672138 17431451 P423_13150 Escherichia coli JJ1886 transcriptional regulator YP_008722643.1 2671203 R 1355100 CDS YP_008722644.1 556552335 17431452 2672356..2673693 1 NC_022648.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 2673693 17431452 P423_13155 Escherichia coli JJ1886 permease YP_008722644.1 2672356 D 1355100 CDS YP_008722645.1 556552336 17431453 2673711..2675039 1 NC_022648.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-serine dehydratase 2675039 17431453 P423_13160 Escherichia coli JJ1886 D-serine dehydratase YP_008722645.1 2673711 D 1355100 CDS YP_008722646.1 556552337 17431454 complement(2675147..2676685) 1 NC_022648.1 multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein B 2676685 emrB 17431454 emrB Escherichia coli JJ1886 multidrug resistance protein B YP_008722646.1 2675147 R 1355100 CDS YP_008722647.1 556552338 17431455 complement(2676685..2677848) 1 NC_022648.1 with ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2677848 17431455 P423_13170 Escherichia coli JJ1886 multidrug transporter YP_008722647.1 2676685 R 1355100 CDS YP_008722648.1 556552339 17431456 2678264..2678878 1 NC_022648.1 response regulator in two-component regulatory system with EvgS; phosphorylated EvgA activates ompC, emrKY, gadABC, hdeAB and others genes; involved in acid resistance, osmotic adaption, and drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 2678878 17431456 P423_13175 Escherichia coli JJ1886 LuxR family transcriptional regulator YP_008722648.1 2678264 D 1355100 CDS YP_008722649.1 556552340 17431457 2678883..2682476 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 2682476 17431457 P423_13180 Escherichia coli JJ1886 sensory histidine kinase YP_008722649.1 2678883 D 1355100 CDS YP_008722650.1 556552341 17431458 complement(2682532..2683677) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CoA-transferase 2683677 17431458 P423_13185 Escherichia coli JJ1886 CoA-transferase YP_008722650.1 2682532 R 1355100 CDS YP_008722651.1 556552342 17431459 complement(2683751..2684695) 1 NC_022648.1 member of the AEC family of auxin efflux transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2684695 17431459 P423_13190 Escherichia coli JJ1886 transporter YP_008722651.1 2683751 R 1355100 CDS YP_008722652.1 556552343 17431460 complement(2684765..2686459) 1 NC_022648.1 catalyzes the formation of formyl-CoA from oxalyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxalyl-CoA decarboxylase 2686459 17431460 P423_13195 Escherichia coli JJ1886 oxalyl-CoA decarboxylase YP_008722652.1 2684765 R 1355100 CDS YP_008722653.1 556552344 17431461 complement(2686513..2687763) 1 NC_022648.1 catalyzes the formation of oxalyl-CoA from oxalate and Formyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; formyl-CoA transferase 2687763 17431461 P423_13200 Escherichia coli JJ1886 formyl-CoA transferase YP_008722653.1 2686513 R 1355100 CDS YP_008722654.1 556552345 17431462 complement(2688275..2688907) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2688907 17431462 P423_13205 Escherichia coli JJ1886 hypothetical protein YP_008722654.1 2688275 R 1355100 CDS YP_008722655.1 556552346 17431463 2689202..2689477 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2689477 17431463 P423_13210 Escherichia coli JJ1886 hypothetical protein YP_008722655.1 2689202 D 1355100 CDS YP_008722656.1 556552347 17431464 complement(2689554..2689796) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2689796 17431464 P423_13215 Escherichia coli JJ1886 hypothetical protein YP_008722656.1 2689554 R 1355100 CDS YP_008722657.1 556552348 17431465 2690149..2691069 1 NC_022648.1 Acylates the intermediate (KDO)2-lipid IVA to form (KDO)2-(palmitoleoyl)-lipid IVA in cells subjected to cold shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipid A biosynthesis palmitoleoyl acyltransferase 2691069 17431465 P423_13220 Escherichia coli JJ1886 lipid A biosynthesis palmitoleoyl acyltransferase YP_008722657.1 2690149 D 1355100 CDS YP_008722658.1 556552349 17431466 complement(2691562..2692800) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate aminotransferase 2692800 17431466 P423_13225 Escherichia coli JJ1886 aspartate aminotransferase YP_008722658.1 2691562 R 1355100 CDS YP_008722659.1 556552350 17431467 2693177..2694874 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2694874 17431467 P423_13230 Escherichia coli JJ1886 membrane protein YP_008722659.1 2693177 D 1355100 CDS YP_008722660.1 556552351 17431468 2694889..2695623 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LytTR family transcriptional regulator 2695623 17431468 P423_13235 Escherichia coli JJ1886 LytTR family transcriptional regulator YP_008722660.1 2694889 D 1355100 CDS YP_008722661.1 556552352 17431469 2695636..2696493 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 2696493 17431469 P423_13240 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008722661.1 2695636 D 1355100 CDS YP_008722662.1 556552353 17431470 complement(2696496..2698991) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 2698991 17431470 P423_13245 Escherichia coli JJ1886 PTS fructose transporter subunit IIA YP_008722662.1 2696496 R 1355100 CDS YP_008722663.1 556552354 17431471 complement(2699016..2700053) 1 NC_022648.1 metalloprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.; exoaminopeptidase 2700053 17431471 P423_13250 Escherichia coli JJ1886 exoaminopeptidase YP_008722663.1 2699016 R 1355100 CDS YP_008722664.1 556552355 17431472 complement(2700053..2701138) 1 NC_022648.1 Xaa-Pro aminopeptidase; limited methionine aminopeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase 2701138 17431472 P423_13255 Escherichia coli JJ1886 aminopeptidase YP_008722664.1 2700053 R 1355100 CDS YP_008722665.1 556552356 17431473 complement(2701153..2702400) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIC 2702400 17431473 P423_13260 Escherichia coli JJ1886 PTS fructose transporter subunit IIC YP_008722665.1 2701153 R 1355100 CDS YP_008722666.1 556552357 17431474 complement(2702422..2702748) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 2702748 17431474 P423_13265 Escherichia coli JJ1886 PTS fructose transporter subunit IIB YP_008722666.1 2702422 R 1355100 CDS YP_008722667.1 556552358 17431475 complement(2702967..2703932) 1 NC_022648.1 catalyzes the conversion of ATP and D-glucose to ADP and D-glucose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucokinase 2703932 glk 17431475 glk Escherichia coli JJ1886 glucokinase YP_008722667.1 2702967 R 1355100 CDS YP_008722668.1 556552359 17431477 2705507..2705833 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2705833 17431477 P423_13280 Escherichia coli JJ1886 hypothetical protein YP_008722668.1 2705507 D 1355100 CDS YP_008722669.1 556552360 17431478 complement(2705974..2707212) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; manganese transporter 2707212 17431478 P423_13285 Escherichia coli JJ1886 manganese transporter YP_008722669.1 2705974 R 1355100 CDS YP_008722670.1 556552361 17431479 2707548..2708750 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 2708750 17431479 P423_13290 Escherichia coli JJ1886 nucleoside permease YP_008722670.1 2707548 D 1355100 CDS YP_008722671.1 556552362 17431480 complement(2708800..2710989) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2710989 17431480 P423_13295 Escherichia coli JJ1886 hypothetical protein YP_008722671.1 2708800 R 1355100 CDS YP_008722672.1 556552363 17431483 2711607..2711966 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2711966 17431483 P423_13310 Escherichia coli JJ1886 hypothetical protein YP_008722672.1 2711607 D 1355100 CDS YP_008722673.1 556552364 17431484 2711968..2712360 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2712360 17431484 P423_13315 Escherichia coli JJ1886 hypothetical protein YP_008722673.1 2711968 D 1355100 CDS YP_008722674.1 556552365 17431485 complement(2712411..2713826) 1 NC_022648.1 catalyzes a two-step reaction, first charging an glutamate molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; contains discriminating and non-discriminating subtypes; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaminyl-tRNA synthetase 2713826 gltX 17431485 gltX Escherichia coli JJ1886 glutaminyl-tRNA synthetase YP_008722674.1 2712411 R 1355100 CDS YP_008722675.1 556552366 17431490 complement(2714593..2715477) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2715477 17431490 P423_13345 Escherichia coli JJ1886 transcriptional regulator YP_008722675.1 2714593 R 1355100 CDS YP_008722676.1 556552367 17431491 complement(2715729..2716985) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 2716985 17431491 P423_13350 Escherichia coli JJ1886 nucleoside permease YP_008722676.1 2715729 R 1355100 CDS YP_008722677.1 556552368 17431492 complement(2717046..2717879) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine nucleoside phosphorylase 2717879 17431492 P423_13355 Escherichia coli JJ1886 purine nucleoside phosphorylase YP_008722677.1 2717046 R 1355100 CDS YP_008722678.1 556552369 17431493 2718128..2718892 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2718892 17431493 P423_13360 Escherichia coli JJ1886 membrane protein YP_008722678.1 2718128 D 1355100 CDS YP_008722679.1 556552370 17431494 complement(2718931..2719857) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 2719857 17431494 P423_13365 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008722679.1 2718931 R 1355100 CDS YP_008722680.1 556552371 17431495 2719947..2720945 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2720945 17431495 P423_13370 Escherichia coli JJ1886 hypothetical protein YP_008722680.1 2719947 D 1355100 CDS YP_008722681.1 556552372 17431496 complement(2720942..2721160) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2721160 17431496 P423_13375 Escherichia coli JJ1886 hypothetical protein YP_008722681.1 2720942 R 1355100 CDS YP_008722682.1 556552373 17431497 complement(2721162..2723177) 1 NC_022648.1 this protein catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction; essential for DNA replication and repair of damaged DNA; similar to ligase LigB; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent DNA ligase LigA 2723177 ligA 17431497 ligA Escherichia coli JJ1886 NAD-dependent DNA ligase LigA YP_008722682.1 2721162 R 1355100 CDS YP_008722683.1 556552374 17431498 complement(2723248..2724246) 1 NC_022648.1 interacts with cell division protein FitsZ and may be required to anchor septal ring structure; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein ZipA 2724246 17431498 P423_13385 Escherichia coli JJ1886 cell division protein ZipA YP_008722683.1 2723248 R 1355100 CDS YP_008722684.1 556552375 17431499 2724476..2725237 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate transporter 2725237 17431499 P423_13390 Escherichia coli JJ1886 sulfate transporter YP_008722684.1 2724476 D 1355100 CDS YP_008722685.1 556552376 17431500 2725422..2726393 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine synthase A 2726393 17431500 P423_13395 Escherichia coli JJ1886 cysteine synthase A YP_008722685.1 2725422 D 1355100 CDS YP_008722686.1 556552377 17431501 2726777..2727034 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter 2727034 17431501 P423_13400 Escherichia coli JJ1886 PTS sugar transporter YP_008722686.1 2726777 D 1355100 CDS YP_008722687.1 556552378 17431502 2727079..2728806 1 NC_022648.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate-protein phosphotransferase 2728806 17431502 P423_13405 Escherichia coli JJ1886 phosphoenolpyruvate-protein phosphotransferase YP_008722687.1 2727079 D 1355100 CDS YP_008722688.1 556552379 17431503 2728847..2729356 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIA 2729356 17431503 P423_13410 Escherichia coli JJ1886 PTS glucose transporter subunit IIA YP_008722688.1 2728847 D 1355100 CDS YP_008722689.1 556552380 17431504 complement(2729399..2730250) 1 NC_022648.1 catalyzes the formation of pyridoxal 5'-phosphate from pyridoxal; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxymethylpyrimidine kinase 2730250 pdxK 17431504 pdxK Escherichia coli JJ1886 hydroxymethylpyrimidine kinase YP_008722689.1 2729399 R 1355100 CDS YP_008722690.1 556552381 17431505 2730355..2730723 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2730723 17431505 P423_13420 Escherichia coli JJ1886 hypothetical protein YP_008722690.1 2730355 D 1355100 CDS YP_008722691.1 556552382 17431506 complement(2730726..2731637) 1 NC_022648.1 catalyzes the formation of cysteine from 3-O-acetyl-L-serine and hydrogen sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine synthase B 2731637 cysM 17431506 cysM Escherichia coli JJ1886 cysteine synthase B YP_008722691.1 2730726 R 1355100 CDS YP_008722692.1 556552383 17431507 complement(2731772..2732869) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate ABC transporter ATP-binding protein 2732869 17431507 P423_13430 Escherichia coli JJ1886 sulfate ABC transporter ATP-binding protein YP_008722692.1 2731772 R 1355100 CDS YP_008722693.1 556552384 17431508 complement(2732859..2733734) 1 NC_022648.1 Part of the ABC transporter complex cysAWTP involved in sulfate/thiosulfate import; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate/thiosulfate transporter permease subunit 2733734 cysW 17431508 cysW Escherichia coli JJ1886 sulfate/thiosulfate transporter permease subunit YP_008722693.1 2732859 R 1355100 CDS YP_008722694.1 556552385 17431509 complement(2733734..2734567) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate/thiosulfate transporter subunit 2734567 17431509 P423_13440 Escherichia coli JJ1886 sulfate/thiosulfate transporter subunit YP_008722694.1 2733734 R 1355100 CDS YP_008722695.1 556552386 17431510 complement(2734567..2735583) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate transporter subunit 2735583 17431510 P423_13445 Escherichia coli JJ1886 thiosulfate transporter subunit YP_008722695.1 2734567 R 1355100 CDS YP_008722696.1 556552387 17431511 complement(2735741..2736532) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; short-chain dehydrogenase 2736532 17431511 P423_13450 Escherichia coli JJ1886 short-chain dehydrogenase YP_008722696.1 2735741 R 1355100 CDS YP_008722697.1 556552388 17431512 2736812..2737708 1 NC_022648.1 catalyzes the cleavage of the lactyl ether moiety of N-acetylmuramic acid-6-phosphate (MurNAc-6-P) to form N-acetylglucosamine-6-phosphate (GlcNAc-6-P) and lactate; involved in MurNAc dissimilation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramic acid-6-phosphate etherase 2737708 murQ 17431512 murQ Escherichia coli JJ1886 N-acetylmuramic acid-6-phosphate etherase YP_008722697.1 2736812 D 1355100 CDS YP_008722698.1 556552389 17431513 2737712..2739136 1 NC_022648.1 belongs to PEP-dependent PTS system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; requires crr-encoded enzyme IIA-glucose component; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylmuramic acid transporter subunit IIBC 2739136 murP 17431513 murP Escherichia coli JJ1886 PTS N-acetylmuramic acid transporter subunit IIBC YP_008722698.1 2737712 D 1355100 CDS YP_008722699.1 556552390 17431514 complement(2739314..2740213) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; deferrochelatase/peroxidase YfeX 2740213 17431514 P423_13465 Escherichia coli JJ1886 deferrochelatase/peroxidase YfeX YP_008722699.1 2739314 R 1355100 CDS YP_008722700.1 556552391 17431515 complement(2740309..2740884) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RpoE-regulated lipoprotein 2740884 17431515 P423_13470 Escherichia coli JJ1886 RpoE-regulated lipoprotein YP_008722700.1 2740309 R 1355100 CDS YP_008722701.1 556552392 17431516 complement(2740945..2741394) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2741394 17431516 P423_13475 Escherichia coli JJ1886 membrane protein YP_008722701.1 2740945 R 1355100 CDS YP_008722702.1 556552393 17431517 complement(2741381..2741806) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 2741806 17431517 P423_13480 Escherichia coli JJ1886 acetyltransferase YP_008722702.1 2741381 R 1355100 CDS YP_008722703.1 556552394 17431518 2742020..2742889 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 2742889 17431518 P423_13485 Escherichia coli JJ1886 N-acetylmuramoyl-L-alanine amidase YP_008722703.1 2742020 D 1355100 CDS YP_008722704.1 556552395 17431519 2742890..2743792 1 NC_022648.1 catalyzes the conversion of the propionic acid groups of rings I and III to vinyl groups during heme synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; coproporphyrinogen III oxidase 2743792 17431519 P423_13490 Escherichia coli JJ1886 coproporphyrinogen III oxidase YP_008722704.1 2742890 D 1355100 CDS YP_008722705.1 556552396 17431520 complement(2743798..2744850) 1 NC_022648.1 activates the transcription of the ethanolamine utilization operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2744850 17431520 P423_13495 Escherichia coli JJ1886 transcriptional regulator YP_008722705.1 2743798 R 1355100 CDS YP_008722706.1 556552397 17431521 complement(2744896..2745396) 1 NC_022648.1 ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxysome shell protein 2745396 17431521 P423_13500 Escherichia coli JJ1886 carboxysome shell protein YP_008722706.1 2744896 R 1355100 CDS YP_008722707.1 556552398 17431522 complement(2745409..2746068) 1 NC_022648.1 carboxysome structural protein involved in ethanolamine utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutL 2746068 17431522 P423_13505 Escherichia coli JJ1886 ethanolamine utilization protein EutL YP_008722707.1 2745409 R 1355100 CDS YP_008722708.1 556552399 17431523 complement(2746078..2746965) 1 NC_022648.1 catalyzes the formation of acetaldehyde from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine ammonia-lyase small subunit 2746965 17431523 P423_13510 Escherichia coli JJ1886 ethanolamine ammonia-lyase small subunit YP_008722708.1 2746078 R 1355100 CDS YP_008722709.1 556552400 17431524 complement(2746986..2748347) 1 NC_022648.1 with EutC catalyzes the formation of acetaldehyde and ammonia from ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine ammonia lyase large subunit 2748347 17431524 P423_13515 Escherichia coli JJ1886 ethanolamine ammonia lyase large subunit YP_008722709.1 2746986 R 1355100 CDS YP_008722710.1 556552401 17431525 complement(2748359..2749762) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutA 2749762 eutA 17431525 eutA Escherichia coli JJ1886 ethanolamine utilization protein EutA YP_008722710.1 2748359 R 1355100 CDS YP_008722711.1 556552402 17431526 complement(2749759..2750985) 1 NC_022648.1 may be involved in the transport of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutH 2750985 17431526 P423_13525 Escherichia coli JJ1886 ethanolamine utilization protein EutH YP_008722711.1 2749759 R 1355100 CDS YP_008722712.1 556552403 17431527 complement(2751202..2752389) 1 NC_022648.1 aldehyde reductase; catalyzes the conversion of acetaldehyde to ethanol; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanol dehydrogenase 2752389 17431527 P423_13530 Escherichia coli JJ1886 ethanol dehydrogenase YP_008722712.1 2751202 R 1355100 CDS YP_008722713.1 556552404 17431528 complement(2752379..2753215) 1 NC_022648.1 possible chaperonin; may be involved in the assembly of the carboxysome; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutJ 2753215 17431528 P423_13535 Escherichia coli JJ1886 ethanolamine utilization protein EutJ YP_008722713.1 2752379 R 1355100 CDS YP_008722714.1 556552405 17431529 complement(2753226..2754629) 1 NC_022648.1 ethanolamine utilization protein; catalyzes the formation of acetyl-CoA from acetaldehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 2754629 17431529 P423_13540 Escherichia coli JJ1886 aldehyde dehydrogenase YP_008722714.1 2753226 R 1355100 CDS YP_008722715.1 556552406 17431530 complement(2754641..2754928) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine catabolic microcompartment shell protein EutN 2754928 17431530 P423_13545 Escherichia coli JJ1886 ethanolamine catabolic microcompartment shell protein EutN YP_008722715.1 2754641 R 1355100 CDS YP_008722716.1 556552407 17431531 complement(2755035..2755370) 1 NC_022648.1 ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxysome shell protein 2755370 17431531 P423_13550 Escherichia coli JJ1886 carboxysome shell protein YP_008722716.1 2755035 R 1355100 CDS YP_008722717.1 556552408 17431532 complement(2755367..2756383) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphotransacetylase 2756383 17431532 P423_13555 Escherichia coli JJ1886 phosphotransacetylase YP_008722717.1 2755367 R 1355100 CDS YP_008722718.1 556552409 17431533 complement(2756380..2757183) 1 NC_022648.1 catalyzes the conversion of cob(I)yrinic acid a,c-diamide to adenosylcob(III)yrinic acid a,c-diamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization cobalamin adenosyltransferase 2757183 17431533 P423_13560 Escherichia coli JJ1886 ethanolamine utilization cobalamin adenosyltransferase YP_008722718.1 2756380 R 1355100 CDS YP_008722719.1 556552410 17431534 complement(2757180..2757881) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutQ 2757881 17431534 P423_13565 Escherichia coli JJ1886 ethanolamine utilization protein EutQ YP_008722719.1 2757180 R 1355100 CDS YP_008722720.1 556552411 17431535 complement(2757856..2758335) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ethanolamine utilization protein EutP 2758335 17431535 P423_13570 Escherichia coli JJ1886 ethanolamine utilization protein EutP YP_008722720.1 2757856 R 1355100 CDS YP_008722721.1 556552412 17431536 complement(2758348..2758683) 1 NC_022648.1 ethanolamine utilization protein; involved in the degredation of ethanolamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxysome shell protein 2758683 17431536 P423_13575 Escherichia coli JJ1886 carboxysome shell protein YP_008722721.1 2758348 R 1355100 CDS YP_008722722.1 556552413 17431537 complement(2758976..2761255) 1 NC_022648.1 NADP-dependent; catalyzes the oxidative decarboxylation of malate to form pyruvate; decarboxylates oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malic enzyme 2761255 17431537 P423_13580 Escherichia coli JJ1886 malic enzyme YP_008722722.1 2758976 R 1355100 CDS YP_008722723.1 556552414 17431538 2761544..2762494 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transaldolase 2762494 17431538 P423_13585 Escherichia coli JJ1886 transaldolase YP_008722723.1 2761544 D 1355100 CDS YP_008722724.1 556552415 17431539 2762514..2764517 1 NC_022648.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transketolase 2764517 17431539 P423_13590 Escherichia coli JJ1886 transketolase YP_008722724.1 2762514 D 1355100 CDS YP_008722725.1 556552416 17431540 complement(2764594..2765637) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2765637 17431540 P423_13595 Escherichia coli JJ1886 hypothetical protein YP_008722725.1 2764594 R 1355100 CDS YP_008722726.1 556552417 17431541 complement(2765763..2766338) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GDP-mannose pyrophosphatase NudK 2766338 17431541 P423_13600 Escherichia coli JJ1886 GDP-mannose pyrophosphatase NudK YP_008722726.1 2765763 R 1355100 CDS YP_008722727.1 556552418 17431542 complement(2766406..2768385) 1 NC_022648.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase Fe-S binding subunit 2768385 17431542 P423_13605 Escherichia coli JJ1886 oxidoreductase Fe-S binding subunit YP_008722727.1 2766406 R 1355100 CDS YP_008722728.1 556552419 17431543 2768591..2770291 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrate/nitrite sensor protein NarQ 2770291 17431543 P423_13610 Escherichia coli JJ1886 nitrate/nitrite sensor protein NarQ YP_008722728.1 2768591 D 1355100 CDS YP_008722729.1 556552420 17431544 2770455..2773568 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 2773568 17431544 P423_13615 Escherichia coli JJ1886 multidrug transporter YP_008722729.1 2770455 D 1355100 CDS YP_008722730.1 556552421 17431545 2774107..2774463 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; reductase 2774463 17431545 P423_13620 Escherichia coli JJ1886 reductase YP_008722730.1 2774107 D 1355100 CDS YP_008722731.1 556552422 17431546 2774467..2775594 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyl-diaminopimelate desuccinylase 2775594 17431546 P423_13625 Escherichia coli JJ1886 succinyl-diaminopimelate desuccinylase YP_008722731.1 2774467 D 1355100 CDS YP_008722732.1 556552423 17431547 2775622..2775822 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2775822 17431547 P423_13630 Escherichia coli JJ1886 membrane protein YP_008722732.1 2775622 D 1355100 CDS YP_008722733.1 556552424 17431548 complement(2775903..2776601) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 2776601 17431548 P423_13635 Escherichia coli JJ1886 hydrolase YP_008722733.1 2775903 R 1355100 CDS YP_008722734.1 556552425 17431549 complement(2776675..2778690) 1 NC_022648.1 cetylates the wobble base C34 of the elongation-specific methionine tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine tRNA cytidine acetyltransferase 2778690 17431549 P423_13640 Escherichia coli JJ1886 methionine tRNA cytidine acetyltransferase YP_008722734.1 2776675 R 1355100 CDS YP_008722735.1 556552426 17431550 complement(2778705..2779568) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2779568 17431550 P423_13645 Escherichia coli JJ1886 hypothetical protein YP_008722735.1 2778705 R 1355100 CDS YP_008722736.1 556552427 17431551 complement(2779736..2780449) 1 NC_022648.1 catalyzes the formation of (S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4- carboxamido)succinate from 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate and L-aspartate in purine biosynthesis; SAICAR synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylaminoimidazole-succinocarboxamide synthase 2780449 17431551 P423_13650 Escherichia coli JJ1886 phosphoribosylaminoimidazole-succinocarboxamide synthase YP_008722736.1 2779736 R 1355100 CDS YP_008722737.1 556552428 17431552 complement(2780662..2781696) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2781696 17431552 P423_13655 Escherichia coli JJ1886 lipoprotein YP_008722737.1 2780662 R 1355100 CDS YP_008722738.1 556552429 17431553 complement(2781713..2782591) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrodipicolinate synthase 2782591 17431553 P423_13660 Escherichia coli JJ1886 dihydrodipicolinate synthase YP_008722738.1 2781713 R 1355100 CDS YP_008722739.1 556552430 17431554 2782737..2783309 1 NC_022648.1 negative transcriptional regulator of the gcvTHP operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine cleavage system regulatory protein 2783309 gcvR 17431554 gcvR Escherichia coli JJ1886 glycine cleavage system regulatory protein YP_008722739.1 2782737 D 1355100 CDS YP_008722740.1 556552431 17431555 2783309..2783779 1 NC_022648.1 bacterioferritin comigratory protein; thiol peroxidase; thioredoxin-dependent; hydroperoxide peroxidase; in Escherichia coli this enzyme preferentially reduces linoleic acid hydroperoxide; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin-dependent thiol peroxidase 2783779 bcp 17431555 bcp Escherichia coli JJ1886 thioredoxin-dependent thiol peroxidase YP_008722740.1 2783309 D 1355100 CDS YP_008722741.1 556552432 17431556 complement(2783877..2784938) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permase 2784938 17431556 P423_13675 Escherichia coli JJ1886 permase YP_008722741.1 2783877 R 1355100 CDS YP_008722742.1 556552433 17431557 2785151..2786614 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2786614 17431557 P423_13680 Escherichia coli JJ1886 hypothetical protein YP_008722742.1 2785151 D 1355100 CDS YP_008722743.1 556552434 17431558 2786635..2786994 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arsenate reductase 2786994 17431558 P423_13685 Escherichia coli JJ1886 arsenate reductase YP_008722743.1 2786635 D 1355100 CDS YP_008722744.1 556552435 17431559 complement(2787132..2787878) 1 NC_022648.1 controls initiation of DNA replication by inhibiting re-initiation of replication, promotes hydrolysis of DnaA-bound ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication initiation factor 2787878 17431559 P423_13690 Escherichia coli JJ1886 DNA replication initiation factor YP_008722744.1 2787132 R 1355100 CDS YP_008722745.1 556552436 17431560 complement(2787928..2789217) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil transporter 2789217 17431560 P423_13695 Escherichia coli JJ1886 uracil transporter YP_008722745.1 2787928 R 1355100 CDS YP_008722746.1 556552437 17431561 complement(2789303..2789929) 1 NC_022648.1 Catalyzes the formation of uracil and 5-phospho-alpha-D-ribosy 1-diphosphate from UMP and diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil phosphoribosyltransferase 2789929 upp 17431561 upp Escherichia coli JJ1886 uracil phosphoribosyltransferase YP_008722746.1 2789303 R 1355100 CDS YP_008722747.1 556552438 17431562 2790254..2791291 1 NC_022648.1 catalyzes the formation of 1-(5-phosphoribosyl)-5-aminoimidazole from 2-(formamido)-N1-(5-phosphoribosyl)acetamidine and ATP in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylaminoimidazole synthetase 2791291 17431562 P423_13705 Escherichia coli JJ1886 phosphoribosylaminoimidazole synthetase YP_008722747.1 2790254 D 1355100 CDS YP_008722748.1 556552439 17431563 2791291..2791929 1 NC_022648.1 glycinamide ribonucleotide transformylase; GAR Tfase; catalyzes the synthesis of 5'-phosphoribosylformylglycinamide from 5'-phosphoribosylglycinamide and 10-formyltetrahydrofolate; PurN requires formyl folate for the reaction unlike PurT which uses formate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylglycinamide formyltransferase 2791929 purN 17431563 purN Escherichia coli JJ1886 phosphoribosylglycinamide formyltransferase YP_008722748.1 2791291 D 1355100 CDS YP_008722749.1 556552440 17431564 2792101..2794167 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; polyphosphate kinase 2794167 17431564 P423_13715 Escherichia coli JJ1886 polyphosphate kinase YP_008722749.1 2792101 D 1355100 CDS YP_008722750.1 556552441 17431565 2794172..2795713 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; exopolyphosphatase 2795713 17431565 P423_13720 Escherichia coli JJ1886 exopolyphosphatase YP_008722750.1 2794172 D 1355100 CDS YP_008722751.1 556552442 17431566 complement(2795752..2797995) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 2797995 17431566 P423_13725 Escherichia coli JJ1886 cyclic di-GMP phosphodiesterase YP_008722751.1 2795752 R 1355100 CDS YP_008722752.1 556552443 17431567 complement(2798177..2798329) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2798329 17431567 P423_13730 Escherichia coli JJ1886 hypothetical protein YP_008722752.1 2798177 R 1355100 CDS YP_008722753.1 556552444 17431568 2798347..2798538 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2798538 17431568 P423_13735 Escherichia coli JJ1886 membrane protein YP_008722753.1 2798347 D 1355100 CDS YP_008722754.1 556552445 17431569 2798840..2799358 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2799358 17431569 P423_13740 Escherichia coli JJ1886 membrane protein YP_008722754.1 2798840 D 1355100 CDS YP_008722755.1 556552446 17431570 2799374..2799913 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2799913 17431570 P423_13745 Escherichia coli JJ1886 hypothetical protein YP_008722755.1 2799374 D 1355100 CDS YP_008722756.1 556552447 17431571 complement(2800006..2801583) 1 NC_022648.1 contains glutamine-hydrolyzing domain and glutamine amidotransferase; GMP-binding domain; functions to produce GMP from XMP in the IMP pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; GMP synthase 2801583 guaA 17431571 guaA Escherichia coli JJ1886 GMP synthase YP_008722756.1 2800006 R 1355100 CDS YP_008722757.1 556552448 17431572 complement(2801652..2803163) 1 NC_022648.1 catalyzes the synthesis of xanthosine monophosphate by the NAD+ dependent oxidation of inosine monophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; inosine 5'-monophosphate dehydrogenase 2803163 17431572 P423_13755 Escherichia coli JJ1886 inosine 5'-monophosphate dehydrogenase YP_008722757.1 2801652 R 1355100 CDS YP_008722758.1 556552449 17431573 2803280..2804647 1 NC_022648.1 bidirectionally degrades single-stranded DNA into large acid-insoluble oligonucleotides; Derived by automated computational analysis using gene prediction method: Protein Homology.; exodeoxyribonuclease VII large subunit 2804647 xseA 17431573 xseA Escherichia coli JJ1886 exodeoxyribonuclease VII large subunit YP_008722758.1 2803280 D 1355100 CDS YP_008722759.1 556554695 17431574 complement(2804701..2812782) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RatA-like protein 2812782 17431574 P423_13765 Escherichia coli JJ1886 RatA-like protein YP_008722759.1 2804701 R 1355100 CDS YP_008722760.1 556554696 17431575 complement(2812892..2813884) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; SinI-like protein 2813884 17431575 P423_13770 Escherichia coli JJ1886 SinI-like protein YP_008722760.1 2812892 R 1355100 CDS YP_008722761.1 556554697 17431576 complement(2813940..2816114) 1 NC_022648.1 involved in invasion of epithelial cells; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; intimin 2816114 17431576 P423_13775 Escherichia coli JJ1886 intimin YP_008722761.1 2813940 R 1355100 CDS YP_008722762.1 556552450 17431577 complement(2816320..2816535) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2816535 17431577 P423_13780 Escherichia coli JJ1886 hypothetical protein YP_008722762.1 2816320 R 1355100 CDS YP_008722763.1 556552451 17431578 complement(2816598..2818109) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein Der 2818109 17431578 P423_13785 Escherichia coli JJ1886 GTP-binding protein Der YP_008722763.1 2816598 R 1355100 CDS YP_008722764.1 556552452 17431579 complement(2818188..2819366) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane biogenesis protein BamB 2819366 17431579 P423_13790 Escherichia coli JJ1886 outer membrane biogenesis protein BamB YP_008722764.1 2818188 R 1355100 CDS YP_008722765.1 556552453 17431580 complement(2819377..2819997) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2819997 17431580 P423_13795 Escherichia coli JJ1886 membrane protein YP_008722765.1 2819377 R 1355100 CDS YP_008722766.1 556552454 17431581 complement(2820015..2821289) 1 NC_022648.1 catalyzes a two-step reaction, first charging a histidine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; class II aminoacyl-tRNA synthetase; forms homodimers; some organisms have a paralogous gene, hisZ, that is similar to hisS and produces a protein that performs the first step in histidine biosynthesis along with HisG; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidyl-tRNA synthetase 2821289 hisS 17431581 hisS Escherichia coli JJ1886 histidyl-tRNA synthetase YP_008722766.1 2820015 R 1355100 CDS YP_008722767.1 556552455 17431582 complement(2821400..2822518) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase 2822518 17431582 P423_13805 Escherichia coli JJ1886 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase YP_008722767.1 2821400 R 1355100 CDS YP_008722768.1 556552456 17431583 complement(2822545..2823552) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoskeletal protein RodZ 2823552 17431583 P423_13810 Escherichia coli JJ1886 cytoskeletal protein RodZ YP_008722768.1 2822545 R 1355100 CDS YP_008722769.1 556552457 17431584 complement(2823837..2824991) 1 NC_022648.1 23S rRNA m2A2503 methyltransferase; methylates the C2 position of the A2530 nucleotide in 23S rRNA; may be involved in antibiotic resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S rRNA methyltransferase 2824991 17431584 P423_13815 Escherichia coli JJ1886 50S rRNA methyltransferase YP_008722769.1 2823837 R 1355100 CDS YP_008722770.1 556552458 17431585 complement(2825141..2825572) 1 NC_022648.1 catalyzes the formation of nucleoside triphosphate from ATP and nucleoside diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside diphosphate kinase 2825572 17431585 P423_13820 Escherichia coli JJ1886 nucleoside diphosphate kinase YP_008722770.1 2825141 R 1355100 CDS YP_008722771.1 556552459 17431586 complement(2825721..2828033) 1 NC_022648.1 penicillin-insensitive transglycosylase/transpeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein 1C 2828033 17431586 P423_13825 Escherichia coli JJ1886 penicillin-binding protein 1C YP_008722771.1 2825721 R 1355100 CDS YP_008722772.1 556552460 17431587 complement(2828034..2832995) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2832995 17431587 P423_13830 Escherichia coli JJ1886 hypothetical protein YP_008722772.1 2828034 R 1355100 CDS YP_008722773.1 556552461 17431588 2833202..2834047 1 NC_022648.1 catalyzes the transfer of a sulfur ion to cyanide or to other thiol compounds; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-mercaptopyruvate sulfurtransferase 2834047 sseA 17431588 sseA Escherichia coli JJ1886 3-mercaptopyruvate sulfurtransferase YP_008722773.1 2833202 D 1355100 CDS YP_008722774.1 556552462 17431589 complement(2834540..2835316) 1 NC_022648.1 enhances serine sensitivity caused by inhibition of homoserine dehydrogenase I; Derived by automated computational analysis using gene prediction method: Protein Homology.; enhanced serine sensitivity protein SseB 2835316 17431589 P423_13840 Escherichia coli JJ1886 enhanced serine sensitivity protein SseB YP_008722774.1 2834540 R 1355100 CDS YP_008722775.1 556552463 17431590 complement(2835458..2836741) 1 NC_022648.1 catalyzes the removal of an N-terminal amino acid from a peptide or arylamide; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase B 2836741 17431590 P423_13845 Escherichia coli JJ1886 aminopeptidase B YP_008722775.1 2835458 R 1355100 CDS YP_008722776.1 556552464 17431591 complement(2836800..2837000) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2837000 17431591 P423_13850 Escherichia coli JJ1886 hypothetical protein YP_008722776.1 2836800 R 1355100 CDS YP_008722777.1 556552465 17431592 complement(2837012..2837347) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2Fe-2S ferredoxin 2837347 17431592 P423_13855 Escherichia coli JJ1886 2Fe-2S ferredoxin YP_008722777.1 2837012 R 1355100 CDS YP_008722778.1 556552466 17431593 complement(2837349..2839199) 1 NC_022648.1 involved in the maturation of iron-sulfur cluster-containing proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; chaperone protein HscA 2839199 hscA 17431593 hscA Escherichia coli JJ1886 chaperone protein HscA YP_008722778.1 2837349 R 1355100 CDS YP_008722779.1 556552467 17431594 complement(2839216..2839731) 1 NC_022648.1 J-type co-chaperone that regulates the ATPase and peptide-binding activity of Hsc66 chaperone; may function in biogenesis of iron-sulfur proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; co-chaperone HscB 2839731 hscB 17431594 hscB Escherichia coli JJ1886 co-chaperone HscB YP_008722779.1 2839216 R 1355100 CDS YP_008722780.1 556552468 17431595 complement(2839827..2840150) 1 NC_022648.1 forms iron-sulfur clusters of ferredoxin [2FE-2S]; binds iron in the presence of the thioredoxin reductase system; forms homodimers and tetramers; similar to SufA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster assembly protein 2840150 iscA 17431595 iscA Escherichia coli JJ1886 iron-sulfur cluster assembly protein YP_008722780.1 2839827 R 1355100 CDS YP_008722781.1 556552469 17431596 complement(2840167..2840553) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FeS cluster assembly scaffold IscU 2840553 17431596 P423_13875 Escherichia coli JJ1886 FeS cluster assembly scaffold IscU YP_008722781.1 2840167 R 1355100 CDS YP_008722782.1 556552470 17431597 complement(2840581..2841795) 1 NC_022648.1 catalyzes the removal of elemental sulfur from cysteine to produce alanine; involved in NAD biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine desulfurase 2841795 17431597 P423_13880 Escherichia coli JJ1886 cysteine desulfurase YP_008722782.1 2840581 R 1355100 CDS YP_008722783.1 556552471 17431598 complement(2841907..2842395) 1 NC_022648.1 regulates the expression of the iscRSUA operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2842395 17431598 P423_13885 Escherichia coli JJ1886 transcriptional regulator YP_008722783.1 2841907 R 1355100 CDS YP_008722784.1 556552472 17431599 complement(2842666..2843406) 1 NC_022648.1 catalyzes the fromation of 2'O-methylated cytidine or 2'O-methylated uridine at position 32 in tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 2843406 17431599 P423_13890 Escherichia coli JJ1886 tRNA methyltransferase YP_008722784.1 2842666 R 1355100 CDS YP_008722785.1 556552473 17431600 2843525..2844328 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; inositol monophosphatase 2844328 17431600 P423_13895 Escherichia coli JJ1886 inositol monophosphatase YP_008722785.1 2843525 D 1355100 CDS YP_008722786.1 556552474 17431601 2844473..2845327 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2845327 17431601 P423_13900 Escherichia coli JJ1886 hypothetical protein YP_008722786.1 2844473 D 1355100 CDS YP_008722787.1 556552475 17431602 2845518..2846798 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; stationary phase inducible protein CsiE 2846798 17431602 P423_13905 Escherichia coli JJ1886 stationary phase inducible protein CsiE YP_008722787.1 2845518 D 1355100 CDS YP_008722788.1 556552476 17431603 complement(2846790..2847929) 1 NC_022648.1 transporter of 3-phenylpropionate across the inner membrane; member of the major facilitator superfamily of transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phenylpropionic acid MFS transporter 2847929 17431603 P423_13910 Escherichia coli JJ1886 3-phenylpropionic acid MFS transporter YP_008722788.1 2846790 R 1355100 CDS YP_008722789.1 556552477 17431604 2848299..2848721 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2848721 17431604 P423_13915 Escherichia coli JJ1886 membrane protein YP_008722789.1 2848299 D 1355100 CDS YP_008722790.1 556552478 17431605 complement(2848769..2849641) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2849641 17431605 P423_13920 Escherichia coli JJ1886 hypothetical protein YP_008722790.1 2848769 R 1355100 CDS YP_008722791.1 556552479 17431606 complement(2849653..2850747) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 2850747 17431606 P423_13925 Escherichia coli JJ1886 alcohol dehydrogenase YP_008722791.1 2849653 R 1355100 CDS YP_008722792.1 556552480 17431607 complement(2850780..2851778) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 2851778 17431607 P423_13930 Escherichia coli JJ1886 sugar ABC transporter permease YP_008722792.1 2850780 R 1355100 CDS YP_008722793.1 556552481 17431608 complement(2851781..2853310) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATP-binding protein 2853310 17431608 P423_13935 Escherichia coli JJ1886 heme ABC transporter ATP-binding protein YP_008722793.1 2851781 R 1355100 CDS YP_008722794.1 556552482 17431609 complement(2853333..2854316) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 2854316 17431609 P423_13940 Escherichia coli JJ1886 sugar ABC transporter substrate-binding protein YP_008722794.1 2853333 R 1355100 CDS YP_008722795.1 556552483 17431610 complement(2854413..2857694) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2857694 17431610 P423_13945 Escherichia coli JJ1886 hypothetical protein YP_008722795.1 2854413 R 1355100 CDS YP_008722796.1 556552484 17431611 2857812..2859005 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2859005 17431611 P423_13950 Escherichia coli JJ1886 hypothetical protein YP_008722796.1 2857812 D 1355100 CDS YP_008722797.1 556552485 17431612 complement(2859069..2860322) 1 NC_022648.1 catalyzes the reaction of glycine with 5,10-methylenetetrahydrofolate to form L-serine and tetrahydrofolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine hydroxymethyltransferase 2860322 glyA 17431612 glyA Escherichia coli JJ1886 serine hydroxymethyltransferase YP_008722797.1 2859069 R 1355100 CDS YP_008722798.1 556552486 17431613 2860651..2861841 1 NC_022648.1 flavohemoprotein; catalyzes the formation of nitrate from nitric oxide; can also catalyze the reduction of dihydropteridine; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 2861841 17431613 P423_13960 Escherichia coli JJ1886 bifunctional nitric oxide dioxygenase/dihydropteridine reductase 2 YP_008722798.1 2860651 D 1355100 CDS YP_008722799.1 556552487 17431614 complement(2861886..2862224) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulatory protein P-II 2862224 17431614 P423_13965 Escherichia coli JJ1886 nitrogen regulatory protein P-II YP_008722799.1 2861886 R 1355100 CDS YP_008722800.1 556552488 17431615 complement(2862285..2863619) 1 NC_022648.1 with GlrK is part of a two-component signal transduction system regulating glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.; response regulator 2863619 17431615 P423_13970 Escherichia coli JJ1886 response regulator YP_008722800.1 2862285 R 1355100 CDS YP_008722801.1 556552489 17431616 complement(2863609..2864322) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2864322 17431616 P423_13975 Escherichia coli JJ1886 membrane protein YP_008722801.1 2863609 R 1355100 CDS YP_008722802.1 556552490 17431617 complement(2864487..2865914) 1 NC_022648.1 part of the GlrKR two-component signal transduction system involved in the regulation of glmY; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 2865914 17431617 P423_13980 Escherichia coli JJ1886 sensory histidine kinase YP_008722802.1 2864487 R 1355100 CDS YP_008722803.1 556552491 17431618 complement(2866490..2870374) 1 NC_022648.1 catalyzes the formation of 2-(formamido)-N1-(5-phospho-D-ribosyl)acetamidine from N2-formyl-N1-(5-phospho-D-ribosyl)glycinamide and L-glutamine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylformylglycinamidine synthase 2870374 17431618 P423_13985 Escherichia coli JJ1886 phosphoribosylformylglycinamidine synthase YP_008722803.1 2866490 R 1355100 CDS YP_008722804.1 556552492 17431619 2870635..2872191 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2872191 17431619 P423_13990 Escherichia coli JJ1886 membrane protein YP_008722804.1 2870635 D 1355100 CDS YP_008722805.1 556552493 17431620 complement(2872188..2872724) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosine deaminase 2872724 17431620 P423_13995 Escherichia coli JJ1886 adenosine deaminase YP_008722805.1 2872188 R 1355100 CDS YP_008722806.1 556552494 17431621 complement(2872749..2873384) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2873384 17431621 P423_14000 Escherichia coli JJ1886 hypothetical protein YP_008722806.1 2872749 R 1355100 CDS YP_008722807.1 556552495 17431622 2873593..2874441 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2874441 17431622 P423_14005 Escherichia coli JJ1886 transcriptional regulator YP_008722807.1 2873593 D 1355100 CDS YP_008722808.1 556552496 17431623 2874497..2874757 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 2874757 17431623 P423_14010 Escherichia coli JJ1886 ferredoxin YP_008722808.1 2874497 D 1355100 CDS YP_008722809.1 556554698 17431624 complement(2874951..2875031) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; small toxic protein shoB 2875031 17431624 P423_14015 Escherichia coli JJ1886 small toxic protein shoB YP_008722809.1 2874951 R 1355100 CDS YP_008722810.1 556552497 17431625 complement(2875452..2875832) 1 NC_022648.1 Catalyzes the formation of holo-ACP, which mediates the essential transfer of acyl fatty acid intermediates during the biosynthesis of fatty acids and lipids; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4'-phosphopantetheinyl transferase 2875832 acpS 17431625 acpS Escherichia coli JJ1886 4'-phosphopantetheinyl transferase YP_008722810.1 2875452 R 1355100 CDS YP_008722811.1 556552498 17431626 complement(2875832..2876563) 1 NC_022648.1 involved in the de novo synthesis of pyridoxine (Vitamin B6); Derived by automated computational analysis using gene prediction method: Protein Homology.; pyridoxine 5'-phosphate synthase 2876563 17431626 P423_14025 Escherichia coli JJ1886 pyridoxine 5'-phosphate synthase YP_008722811.1 2875832 R 1355100 CDS YP_008722812.1 556552499 17431627 complement(2876575..2877303) 1 NC_022648.1 involved in DNA repair and RecFOR pathway recombination; RecFOR proteins displace ssDNA-binding protein and facilitate the production of RecA-coated ssDNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA repair protein RecO 2877303 recO 17431627 recO Escherichia coli JJ1886 DNA repair protein RecO YP_008722812.1 2876575 R 1355100 CDS YP_008722813.1 556552500 17431628 complement(2877315..2878220) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase Era 2878220 17431628 P423_14035 Escherichia coli JJ1886 GTPase Era YP_008722813.1 2877315 R 1355100 CDS YP_008722814.1 556552501 17431629 complement(2878217..2878897) 1 NC_022648.1 cytoplasmic enzyme involved in processing rRNA and some mRNAs; substrates typically have dsRNA regions; forms a homodimer; have N-terminal nuclease and C-terminal RNA-binding domains; requires magnesium as preferred ion for activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease III 2878897 rnc 17431629 rnc Escherichia coli JJ1886 ribonuclease III YP_008722814.1 2878217 R 1355100 CDS YP_008722815.1 556552502 17431630 complement(2879169..2880143) 1 NC_022648.1 catalyzes the cleavage of the amino-terminal leader peptide from secretory proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; signal peptidase 2880143 17431630 P423_14045 Escherichia coli JJ1886 signal peptidase YP_008722815.1 2879169 R 1355100 CDS YP_008722816.1 556552503 17431631 complement(2880159..2881958) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor 4 2881958 17431631 P423_14050 Escherichia coli JJ1886 elongation factor 4 YP_008722816.1 2880159 R 1355100 CDS YP_008722817.1 556552504 17431632 complement(2882156..2882635) 1 NC_022648.1 involved in the reduction of the SoxR iron-sulfur cluster; Derived by automated computational analysis using gene prediction method: Protein Homology.; SoxR reducing system protein RseC 2882635 17431632 P423_14055 Escherichia coli JJ1886 SoxR reducing system protein RseC YP_008722817.1 2882156 R 1355100 CDS YP_008722818.1 556552505 17431633 complement(2882632..2883588) 1 NC_022648.1 periplasmic protein; interacts with the C-terminal domain of RseA and stimulates RseA binding to sigmaE via the cytoplasmic RseA N-terminal domain which then sequesters sigmaE in the membrane thereby preventing sigmaE associated with core RNAP; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-sigma E factor 2883588 rseB 17431633 rseB Escherichia coli JJ1886 anti-sigma E factor YP_008722818.1 2882632 R 1355100 CDS YP_008722819.1 556552506 17431634 complement(2883588..2884238) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-RNA polymerase sigma factor SigE 2884238 17431634 P423_14065 Escherichia coli JJ1886 anti-RNA polymerase sigma factor SigE YP_008722819.1 2883588 R 1355100 CDS YP_008722820.1 556552507 17431635 complement(2884271..2884846) 1 NC_022648.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor is involved in heat shock and oxidative stress response; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase sigma factor AlgU 2884846 17431635 P423_14070 Escherichia coli JJ1886 RNA polymerase sigma factor AlgU YP_008722820.1 2884271 R 1355100 CDS YP_008722821.1 556552508 17431636 2885254..2886876 1 NC_022648.1 catalyzes the formation of oxaloacetate from L-aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-aspartate oxidase 2886876 17431636 P423_14075 Escherichia coli JJ1886 L-aspartate oxidase YP_008722821.1 2885254 D 1355100 CDS YP_008722822.1 556552509 17431637 complement(2886861..2887598) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (adenine-N6)-methyltransferase 2887598 17431637 P423_14080 Escherichia coli JJ1886 tRNA (adenine-N6)-methyltransferase YP_008722822.1 2886861 R 1355100 CDS YP_008722823.1 556552510 17431638 2887730..2889064 1 NC_022648.1 facilitates an early step in the assembly of the 50S subunit of the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 2889064 17431638 P423_14085 Escherichia coli JJ1886 RNA helicase YP_008722823.1 2887730 D 1355100 CDS YP_008722824.1 556552511 17431639 complement(2889097..2890023) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 2890023 17431639 P423_14090 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008722824.1 2889097 R 1355100 CDS YP_008722825.1 556552512 17431640 2890081..2890668 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine/O-acetylserine exporter 2890668 17431640 P423_14095 Escherichia coli JJ1886 cysteine/O-acetylserine exporter YP_008722825.1 2890081 D 1355100 CDS YP_008722826.1 556552513 17431641 complement(2890724..2891107) 1 NC_022648.1 stress-induced glycyl radical protein that can replace an oxidatively damaged pyruvate formate-lyase subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; autonomous glycyl radical cofactor GrcA 2891107 17431641 P423_14100 Escherichia coli JJ1886 autonomous glycyl radical cofactor GrcA YP_008722826.1 2890724 R 1355100 CDS YP_008722827.1 556552514 17431642 2891412..2892101 1 NC_022648.1 Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine; Derived by automated computational analysis using gene prediction method: Protein Homology.; uracil-DNA glycosylase 2892101 17431642 P423_14105 Escherichia coli JJ1886 uracil-DNA glycosylase YP_008722827.1 2891412 D 1355100 CDS YP_008722828.1 556552515 17431643 complement(2892149..2893186) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 2893186 17431643 P423_14110 Escherichia coli JJ1886 methyltransferase YP_008722828.1 2892149 R 1355100 CDS YP_008722829.1 556554699 17431644 complement(2893176..2893334) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2893334 17431644 P423_14115 Escherichia coli JJ1886 hypothetical protein YP_008722829.1 2893176 R 1355100 CDS YP_008722830.1 556552516 17431645 2893393..2893812 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin 2893812 17431645 P423_14120 Escherichia coli JJ1886 thioredoxin YP_008722830.1 2893393 D 1355100 CDS YP_008722831.1 556552517 17431646 2893857..2894579 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2894579 17431646 P423_14125 Escherichia coli JJ1886 hypothetical protein YP_008722831.1 2893857 D 1355100 CDS YP_008722832.1 556552518 17431647 2894611..2897271 1 NC_022648.1 catalyzes the acetylation of lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein lysine acetyltransferase 2897271 17431647 P423_14130 Escherichia coli JJ1886 protein lysine acetyltransferase YP_008722832.1 2894611 D 1355100 CDS YP_008722833.1 556552519 17431648 2897385..2898740 1 NC_022648.1 catalyzes de novo synthesis of phosphatidylserine from CDP-diacylglycerol and L-serine which leads eventually to the production of phosphatidylethanolamine; bounds to the ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylserine synthase 2898740 pssA 17431648 pssA Escherichia coli JJ1886 phosphatidylserine synthase YP_008722833.1 2897385 D 1355100 CDS YP_008722834.1 556552520 17431649 2898786..2899109 1 NC_022648.1 required for high salt suppression of motility; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2899109 17431649 P423_14140 Escherichia coli JJ1886 lipoprotein YP_008722834.1 2898786 D 1355100 CDS YP_008722835.1 556552521 17431650 complement(2899106..2900404) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-ketoglutarate transporter 2900404 17431650 P423_14145 Escherichia coli JJ1886 alpha-ketoglutarate transporter YP_008722835.1 2899106 R 1355100 CDS YP_008722836.1 556552522 17431655 complement(2906191..2908764) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein disaggregation chaperone 2908764 17431655 P423_14175 Escherichia coli JJ1886 protein disaggregation chaperone YP_008722836.1 2906191 R 1355100 CDS YP_008722837.1 556552523 17431656 complement(2908894..2909625) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2909625 17431656 P423_14180 Escherichia coli JJ1886 membrane protein YP_008722837.1 2908894 R 1355100 CDS YP_008722838.1 556552524 17431657 complement(2909622..2910602) 1 NC_022648.1 responsible for synthesis of pseudouridine from uracil at positions 1911, 1915 and 1917 in 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridine synthase D 2910602 rluD 17431657 rluD Escherichia coli JJ1886 23S rRNA pseudouridine synthase D YP_008722838.1 2909622 R 1355100 CDS YP_008722839.1 556552525 17431658 2910737..2911474 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane biogenesis protein BamD 2911474 17431658 P423_14190 Escherichia coli JJ1886 outer membrane biogenesis protein BamD YP_008722839.1 2910737 D 1355100 CDS YP_008722840.1 556552526 17431659 2911744..2912085 1 NC_022648.1 associated with 30S ribosomal subunit; interferes with translation elongation; Derived by automated computational analysis using gene prediction method: Protein Homology.; translation inhibitor protein RaiA 2912085 17431659 P423_14195 Escherichia coli JJ1886 translation inhibitor protein RaiA YP_008722840.1 2911744 D 1355100 CDS YP_008722841.1 556552527 17431660 2912335..2913495 1 NC_022648.1 catalyzing the formation of prephenate from chorismate and the formation of phenylpyruvate from prephenate in phenylalanine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional chorismate mutase/prephenate dehydratase 2913495 pheA 17431660 pheA Escherichia coli JJ1886 bifunctional chorismate mutase/prephenate dehydratase YP_008722841.1 2912335 D 1355100 CDS YP_008722842.1 556552528 17431661 complement(2913538..2914659) 1 NC_022648.1 catalyzes the formation of prephenate from chorismate and the formation of 4-hydroxyphenylpyruvate from prephenate in tyrosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; chorismate mutase 2914659 tyrA 17431661 tyrA Escherichia coli JJ1886 chorismate mutase YP_008722842.1 2913538 R 1355100 CDS YP_008722843.1 556552529 17431662 complement(2914670..2915740) 1 NC_022648.1 catalyzes the formation of 3-deoxy-D-arabino-hept-2-ulosonate 7 phosphate from phosphoenolpyruvate and D-erythrose 4-phosphate, tyrosine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospho-2-dehydro-3-deoxyheptonate aldolase 2915740 17431662 P423_14210 Escherichia coli JJ1886 phospho-2-dehydro-3-deoxyheptonate aldolase YP_008722843.1 2914670 R 1355100 CDS YP_008722844.1 556552530 17431663 2915950..2916315 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein 2916315 17431663 P423_14215 Escherichia coli JJ1886 lipoprotein YP_008722844.1 2915950 D 1355100 CDS YP_008722845.1 556552531 17431664 2916462..2916980 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2916980 17431664 P423_14220 Escherichia coli JJ1886 hypothetical protein YP_008722845.1 2916462 D 1355100 CDS YP_008722846.1 556552532 17431665 2916970..2918196 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; diguanylate cyclase 2918196 17431665 P423_14225 Escherichia coli JJ1886 diguanylate cyclase YP_008722846.1 2916970 D 1355100 CDS YP_008722847.1 556552533 17431666 2918212..2918694 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2918694 17431666 P423_14230 Escherichia coli JJ1886 membrane protein YP_008722847.1 2918212 D 1355100 CDS YP_008722848.1 556552534 17431667 complement(2918771..2919118) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L19 2919118 17431667 P423_14235 Escherichia coli JJ1886 50S ribosomal protein L19 YP_008722848.1 2918771 R 1355100 CDS YP_008722849.1 556552535 17431668 complement(2919160..2919927) 1 NC_022648.1 methylates guanosine-37 in various tRNAs; uses S-adenosyl-L-methionine to transfer methyl group to tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (guanine-N1)-methyltransferase 2919927 trmD 17431668 trmD Escherichia coli JJ1886 tRNA (guanine-N1)-methyltransferase YP_008722849.1 2919160 R 1355100 CDS YP_008722850.1 556552536 17431669 complement(2919958..2920506) 1 NC_022648.1 Essential for efficient processing of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA-processing protein M 2920506 rimM 17431669 rimM Escherichia coli JJ1886 16S rRNA-processing protein M YP_008722850.1 2919958 R 1355100 CDS YP_008722851.1 556552537 17431670 complement(2920525..2920773) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S16 2920773 17431670 P423_14250 Escherichia coli JJ1886 30S ribosomal protein S16 YP_008722851.1 2920525 R 1355100 CDS YP_008722852.1 556552538 17431671 complement(2920910..2922271) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; signal recognition particle protein Srp54 2922271 17431671 P423_14255 Escherichia coli JJ1886 signal recognition particle protein Srp54 YP_008722852.1 2920910 R 1355100 CDS YP_008722853.1 556552539 17431672 2922363..2923229 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2923229 17431672 P423_14260 Escherichia coli JJ1886 membrane protein YP_008722853.1 2922363 D 1355100 CDS YP_008722854.1 556552540 17431673 2923274..2924536 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2924536 17431673 P423_14265 Escherichia coli JJ1886 membrane protein YP_008722854.1 2923274 D 1355100 CDS YP_008722855.1 556552541 17431674 complement(2924590..2925183) 1 NC_022648.1 with DnaK and DnaJ acts in response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins; may act as a thermosensor; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein GrpE 2925183 17431674 P423_14270 Escherichia coli JJ1886 heat shock protein GrpE YP_008722855.1 2924590 R 1355100 CDS YP_008722856.1 556552542 17431675 2925306..2926184 1 NC_022648.1 catalyzes the phosphorylation of NAD to NADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; inorganic polyphosphate/ATP-NAD kinase 2926184 ppnK 17431675 ppnK Escherichia coli JJ1886 inorganic polyphosphate/ATP-NAD kinase YP_008722856.1 2925306 D 1355100 CDS YP_008722857.1 556552543 17431676 2926270..2927931 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase 2927931 17431676 P423_14280 Escherichia coli JJ1886 recombinase YP_008722857.1 2926270 D 1355100 CDS YP_008722858.1 556552544 17431677 2928080..2928421 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane biogenesis protein BamE 2928421 17431677 P423_14285 Escherichia coli JJ1886 outer membrane biogenesis protein BamE YP_008722858.1 2928080 D 1355100 CDS YP_008722859.1 556552545 17431678 complement(2928483..2928773) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2928773 17431678 P423_14290 Escherichia coli JJ1886 hypothetical protein YP_008722859.1 2928483 R 1355100 CDS YP_008722860.1 556552546 17431679 complement(2928763..2929239) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2929239 17431679 P423_14295 Escherichia coli JJ1886 hypothetical protein YP_008722860.1 2928763 R 1355100 CDS YP_008722861.1 556552547 17431680 2929371..2929853 1 NC_022648.1 binds to ssrA RNA (tmRNA) and is required for its successful binding to ribosomes; also appears to function in the trans-translation step by promoting accommodation of tmRNA into the ribosomal A site; SmpB protects the tmRNA from RNase R degradation in Caulobacter crescentus; both the tmRNA and SmpB are regulated in cell cycle-dependent manner; functions in release of stalled ribosomes from damaged mRNAs and targeting proteins for degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 2929853 smpB 17431680 smpB Escherichia coli JJ1886 single-stranded DNA-binding protein YP_008722861.1 2929371 D 1355100 CDS YP_008722862.1 556554700 17431681 2930731..2931000 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2931000 17431681 P423_14305 Escherichia coli JJ1886 hypothetical protein YP_008722862.1 2930731 D 1355100 CDS YP_008722863.1 556554701 17431682 complement(2931138..2931500) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2931500 17431682 P423_14310 Escherichia coli JJ1886 hypothetical protein YP_008722863.1 2931138 R 1355100 CDS YP_008722864.1 556554702 17431683 complement(2931493..2932401) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2932401 17431683 P423_14315 Escherichia coli JJ1886 hypothetical protein YP_008722864.1 2931493 R 1355100 CDS YP_008722865.1 556554703 17431684 complement(2932623..2932811) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2932811 17431684 P423_14320 Escherichia coli JJ1886 hypothetical protein YP_008722865.1 2932623 R 1355100 CDS YP_008722866.1 556554704 17431685 complement(2932964..2933548) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail assembly protein 2933548 17431685 P423_14325 Escherichia coli JJ1886 tail assembly protein YP_008722866.1 2932964 R 1355100 CDS YP_008722867.1 556552548 17431686 complement(2933548..2936574) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2936574 17431686 P423_14330 Escherichia coli JJ1886 tail protein YP_008722867.1 2933548 R 1355100 CDS YP_008722868.1 556552549 17431687 complement(2936639..2937238) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2937238 17431687 P423_14335 Escherichia coli JJ1886 hypothetical protein YP_008722868.1 2936639 R 1355100 CDS YP_008722869.1 556552550 17431688 complement(2937305..2940703) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; host specificity protein J 2940703 17431688 P423_14340 Escherichia coli JJ1886 host specificity protein J YP_008722869.1 2937305 R 1355100 CDS YP_008722870.1 556554705 17431689 complement(2940764..2941312) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 2941312 17431689 P423_14345 Escherichia coli JJ1886 tail protein YP_008722870.1 2940764 R 1355100 CDS YP_008722871.1 556552551 17431690 complement(2941309..2942052) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2942052 17431690 P423_14350 Escherichia coli JJ1886 tail protein YP_008722871.1 2941309 R 1355100 CDS YP_008722872.1 556552552 17431691 complement(2942057..2942755) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2942755 17431691 P423_14355 Escherichia coli JJ1886 tail protein YP_008722872.1 2942057 R 1355100 CDS YP_008722873.1 556552553 17431692 complement(2942765..2943094) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2943094 17431692 P423_14360 Escherichia coli JJ1886 tail protein YP_008722873.1 2942765 R 1355100 CDS YP_008722874.1 556554706 17431693 complement(2943094..2946159) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 2946159 17431693 P423_14365 Escherichia coli JJ1886 tail protein YP_008722874.1 2943094 R 1355100 CDS YP_008722875.1 556554707 17431694 complement(2946131..2946406) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; tail protein 2946406 17431694 P423_14370 Escherichia coli JJ1886 tail protein YP_008722875.1 2946131 R 1355100 CDS YP_008722876.1 556554708 17431695 complement(2946469..2946858) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; minor tail protein 2946858 17431695 P423_14375 Escherichia coli JJ1886 minor tail protein YP_008722876.1 2946469 R 1355100 CDS YP_008722877.1 556552554 17431696 complement(2946916..2947659) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2947659 17431696 P423_14380 Escherichia coli JJ1886 tail protein YP_008722877.1 2946916 R 1355100 CDS YP_008722878.1 556552555 17431697 complement(2947670..2948071) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2948071 17431697 P423_14385 Escherichia coli JJ1886 tail protein YP_008722878.1 2947670 R 1355100 CDS YP_008722879.1 556552556 17431698 complement(2948068..2948646) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tail protein 2948646 17431698 P423_14390 Escherichia coli JJ1886 tail protein YP_008722879.1 2948068 R 1355100 CDS YP_008722880.1 556552557 17431699 complement(2948658..2948933) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA breaking-rejoining protein 2948933 17431699 P423_14395 Escherichia coli JJ1886 DNA breaking-rejoining protein YP_008722880.1 2948658 R 1355100 CDS YP_008722881.1 556552558 17431700 complement(2948926..2949294) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2949294 17431700 P423_14400 Escherichia coli JJ1886 hypothetical protein YP_008722881.1 2948926 R 1355100 CDS YP_008722882.1 556552559 17431701 complement(2949337..2951364) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase S14 2951364 17431701 P423_14405 Escherichia coli JJ1886 peptidase S14 YP_008722882.1 2949337 R 1355100 CDS YP_008722883.1 556552560 17431702 complement(2951309..2952817) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; capsid protein 2952817 17431702 P423_14410 Escherichia coli JJ1886 capsid protein YP_008722883.1 2951309 R 1355100 CDS YP_008722884.1 556552561 17431703 complement(2952817..2953029) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; primosomal replication protein PriB/PriC domain protein 2953029 17431703 P423_14415 Escherichia coli JJ1886 primosomal replication protein PriB/PriC domain protein YP_008722884.1 2952817 R 1355100 CDS YP_008722885.1 556552562 17431704 complement(2953026..2955128) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA packaging protein 2955128 17431704 P423_14420 Escherichia coli JJ1886 DNA packaging protein YP_008722885.1 2953026 R 1355100 CDS YP_008722886.1 556552563 17431705 complement(2955128..2955622) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; terminase 2955622 17431705 P423_14425 Escherichia coli JJ1886 terminase YP_008722886.1 2955128 R 1355100 CDS YP_008722887.1 556552564 17431706 complement(2956298..2956441) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2956441 17431706 P423_14430 Escherichia coli JJ1886 hypothetical protein YP_008722887.1 2956298 R 1355100 CDS YP_008722888.1 556552565 17431707 complement(2956438..2956905) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endopeptidase 2956905 17431707 P423_14435 Escherichia coli JJ1886 endopeptidase YP_008722888.1 2956438 R 1355100 CDS YP_008722889.1 556552566 17431708 complement(2956902..2957435) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysozyme 2957435 17431708 P423_14440 Escherichia coli JJ1886 lysozyme YP_008722889.1 2956902 R 1355100 CDS YP_008722890.1 556552567 17431709 complement(2957499..2957849) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2957849 17431709 P423_14445 Escherichia coli JJ1886 hypothetical protein YP_008722890.1 2957499 R 1355100 CDS YP_008722891.1 556552568 17431710 complement(2957854..2958069) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; holin 2958069 17431710 P423_14450 Escherichia coli JJ1886 holin YP_008722891.1 2957854 R 1355100 CDS YP_008722892.1 556552569 17431711 complement(2958137..2959189) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA adenine methylase 2959189 17431711 P423_14455 Escherichia coli JJ1886 DNA adenine methylase YP_008722892.1 2958137 R 1355100 CDS YP_008722893.1 556552570 17431712 complement(2959340..2959543) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2959543 17431712 P423_14460 Escherichia coli JJ1886 hypothetical protein YP_008722893.1 2959340 R 1355100 CDS YP_008722894.1 556554709 17431713 complement(2959767..2960192) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2960192 17431713 P423_14465 Escherichia coli JJ1886 hypothetical protein YP_008722894.1 2959767 R 1355100 CDS YP_008722895.1 556552571 17431714 complement(2960473..2961225) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitermination protein 2961225 17431714 P423_14470 Escherichia coli JJ1886 antitermination protein YP_008722895.1 2960473 R 1355100 CDS YP_008722896.1 556552572 17431715 complement(2961239..2962156) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2962156 17431715 P423_14475 Escherichia coli JJ1886 hypothetical protein YP_008722896.1 2961239 R 1355100 CDS YP_008722897.1 556552573 17431716 complement(2962236..2963045) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2963045 17431716 P423_14480 Escherichia coli JJ1886 hypothetical protein YP_008722897.1 2962236 R 1355100 CDS YP_008722898.1 556552574 17431717 complement(2963065..2963454) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; crossover junction endodeoxyribonuclease 2963454 17431717 P423_14485 Escherichia coli JJ1886 crossover junction endodeoxyribonuclease YP_008722898.1 2963065 R 1355100 CDS YP_008722899.1 556552575 17431718 complement(2963451..2963777) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LexA family transcriptional regulator 2963777 17431718 P423_14490 Escherichia coli JJ1886 LexA family transcriptional regulator YP_008722899.1 2963451 R 1355100 CDS YP_008722900.1 556552576 17431719 complement(2963774..2964427) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 2964427 17431719 P423_14495 Escherichia coli JJ1886 methyltransferase YP_008722900.1 2963774 R 1355100 CDS YP_008722901.1 556552577 17431720 complement(2964427..2964915) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2964915 17431720 P423_14500 Escherichia coli JJ1886 hypothetical protein YP_008722901.1 2964427 R 1355100 CDS YP_008722902.1 556552578 17431721 complement(2964918..2965736) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 2965736 17431721 P423_14505 Escherichia coli JJ1886 DNA-binding protein YP_008722902.1 2964918 R 1355100 CDS YP_008722903.1 556552579 17431722 complement(2965733..2965957) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2965957 17431722 P423_14510 Escherichia coli JJ1886 hypothetical protein YP_008722903.1 2965733 R 1355100 CDS YP_008722904.1 556552580 17431723 complement(2965954..2967105) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 2967105 17431723 P423_14515 Escherichia coli JJ1886 peptidase YP_008722904.1 2965954 R 1355100 CDS YP_008722905.1 556552581 17431724 complement(2967102..2967653) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2967653 17431724 P423_14520 Escherichia coli JJ1886 hypothetical protein YP_008722905.1 2967102 R 1355100 CDS YP_008722906.1 556552582 17431725 complement(2967646..2967906) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 2967906 17431725 P423_14525 Escherichia coli JJ1886 DNA-binding protein YP_008722906.1 2967646 R 1355100 CDS YP_008722907.1 556552583 17431726 2968004..2968696 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2968696 17431726 P423_14530 Escherichia coli JJ1886 transcriptional regulator YP_008722907.1 2968004 D 1355100 CDS YP_008722908.1 556552584 17431727 2969419..2969781 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2969781 17431727 P423_14535 Escherichia coli JJ1886 hypothetical protein YP_008722908.1 2969419 D 1355100 CDS YP_008722909.1 556552585 17431728 2969847..2970671 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2970671 17431728 P423_14540 Escherichia coli JJ1886 hypothetical protein YP_008722909.1 2969847 D 1355100 CDS YP_008722910.1 556552586 17431729 2970800..2971336 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2971336 17431729 P423_14545 Escherichia coli JJ1886 hypothetical protein YP_008722910.1 2970800 D 1355100 CDS YP_008722911.1 556552587 17431730 2971327..2971689 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2971689 17431730 P423_14550 Escherichia coli JJ1886 hypothetical protein YP_008722911.1 2971327 D 1355100 CDS YP_008722912.1 556554710 17431731 2972128..2973294 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; integrase 2973294 17431731 P423_14555 Escherichia coli JJ1886 integrase YP_008722912.1 2972128 D 1355100 CDS YP_008722913.1 556554711 17431732 2973302..2975086 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATPase AAA 2975086 17431732 P423_14560 Escherichia coli JJ1886 ATPase AAA YP_008722913.1 2973302 D 1355100 CDS YP_008722914.1 556554712 17431733 2975166..2976065 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA methyltransferase 2976065 17431733 P423_14565 Escherichia coli JJ1886 DNA methyltransferase YP_008722914.1 2975166 D 1355100 CDS YP_008722915.1 556552588 17431734 2976854..2977831 1 NC_022648.1 in Escherichia coli this gene is induced by carbon starvation and depends on sigma S and cAMP-CRP; the structure of the Gab protein shows it is a member of non-heme iron (II)-dependent oxygenase superfamily which includes clavamini acid synthases; forms homotetramers in solution; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon starvation induced protein 2977831 17431734 P423_14570 Escherichia coli JJ1886 carbon starvation induced protein YP_008722915.1 2976854 D 1355100 CDS YP_008722916.1 556552589 17431735 2977851..2979116 1 NC_022648.1 catalyzed the formation of 2-ketoglutarate from 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxyglutarate oxidase 2979116 17431735 P423_14575 Escherichia coli JJ1886 hydroxyglutarate oxidase YP_008722916.1 2977851 D 1355100 CDS YP_008722917.1 556552590 17431736 2979142..2980590 1 NC_022648.1 catalyzes the formation of succinate from succinate semialdehyde; NADP dependent; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinate-semialdehyde dehdyrogenase 2980590 gabD 17431736 gabD Escherichia coli JJ1886 succinate-semialdehyde dehdyrogenase YP_008722917.1 2979142 D 1355100 CDS YP_008722918.1 556552591 17431737 2980604..2981884 1 NC_022648.1 catalyzes the formation of succinate semialdehyde and glutamate from 4-aminobutanoate and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-aminobutyrate aminotransferase 2981884 17431737 P423_14585 Escherichia coli JJ1886 4-aminobutyrate aminotransferase YP_008722918.1 2980604 D 1355100 CDS YP_008722919.1 556552592 17431738 2982121..2983521 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-aminobutyrate transporter 2983521 17431738 P423_14590 Escherichia coli JJ1886 gamma-aminobutyrate transporter YP_008722919.1 2982121 D 1355100 CDS YP_008722920.1 556552593 17431739 2983542..2984204 1 NC_022648.1 regulator of gab gene expression; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2984204 17431739 P423_14595 Escherichia coli JJ1886 transcriptional regulator YP_008722920.1 2983542 D 1355100 CDS YP_008722921.1 556552594 17431740 complement(2984205..2984654) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidoglycan-binding protein LysM 2984654 17431740 P423_14600 Escherichia coli JJ1886 peptidoglycan-binding protein LysM YP_008722921.1 2984205 R 1355100 CDS YP_008722922.1 556552595 17431741 complement(2984738..2984896) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2984896 17431741 P423_14605 Escherichia coli JJ1886 hypothetical protein YP_008722922.1 2984738 R 1355100 CDS YP_008722923.1 556552596 17431742 2985079..2985378 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2985378 17431742 P423_14610 Escherichia coli JJ1886 transcriptional regulator YP_008722923.1 2985079 D 1355100 CDS YP_008722924.1 556552597 17431743 2985388..2985912 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2985912 17431743 P423_14615 Escherichia coli JJ1886 membrane protein YP_008722924.1 2985388 D 1355100 CDS YP_008722925.1 556552598 17431744 complement(2985959..2986363) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 2986363 17431744 P423_14620 Escherichia coli JJ1886 DNA-binding protein YP_008722925.1 2985959 R 1355100 CDS YP_008722926.1 556552599 17431745 2987031..2987480 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2987480 17431745 P423_14625 Escherichia coli JJ1886 membrane protein YP_008722926.1 2987031 D 1355100 CDS YP_008722927.1 556552600 17431746 complement(2987517..2987861) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2987861 17431746 P423_14630 Escherichia coli JJ1886 hypothetical protein YP_008722927.1 2987517 R 1355100 CDS YP_008722928.1 556552601 17431747 2988013..2988342 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2988342 17431747 P423_14635 Escherichia coli JJ1886 membrane protein YP_008722928.1 2988013 D 1355100 CDS YP_008722929.1 556552602 17431748 2988589..2988834 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 2988834 17431748 P423_14640 Escherichia coli JJ1886 glutaredoxin YP_008722929.1 2988589 D 1355100 CDS YP_008722930.1 556552603 17431749 2988831..2989241 1 NC_022648.1 in Salmonella NrdI has a stimulatory effect on the ribonucleotide reductase activity of NrdH with NrdEF; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide reductase stimulatory protein 2989241 nrdI 17431749 nrdI Escherichia coli JJ1886 ribonucleotide reductase stimulatory protein YP_008722930.1 2988831 D 1355100 CDS YP_008722931.1 556552604 17431750 2989214..2991358 1 NC_022648.1 Catalyzes the rate-limiting step in dNTP synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit alpha 2991358 17431750 P423_14650 Escherichia coli JJ1886 ribonucleotide-diphosphate reductase subunit alpha YP_008722931.1 2989214 D 1355100 CDS YP_008722932.1 556552605 17431751 2991368..2992327 1 NC_022648.1 B2 or R2 protein; type 1b enzyme; catalyzes the rate-limiting step in dNTP synthesis; converts nucleotides to deoxynucleotides; forms a homodimer and then a multimeric complex with NrdE; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleotide-diphosphate reductase subunit beta 2992327 17431751 P423_14655 Escherichia coli JJ1886 ribonucleotide-diphosphate reductase subunit beta YP_008722932.1 2991368 D 1355100 CDS YP_008722933.1 556552606 17431752 2992683..2993885 1 NC_022648.1 with ProWX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter ATP-binding protein 2993885 17431752 P423_14660 Escherichia coli JJ1886 glycine/betaine ABC transporter ATP-binding protein YP_008722933.1 2992683 D 1355100 CDS YP_008722934.1 556552607 17431753 2993878..2994942 1 NC_022648.1 with ProVX is involved in the high-affinity uptake of glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine betaine transporter membrane protein 2994942 17431753 P423_14665 Escherichia coli JJ1886 glycine betaine transporter membrane protein YP_008722934.1 2993878 D 1355100 CDS YP_008722935.1 556552608 17431754 2994999..2995991 1 NC_022648.1 with ProVW, part of the high-affinity transport system for the osmoprotectant glycine betaine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine/betaine ABC transporter substrate-binding protein 2995991 proX 17431754 proX Escherichia coli JJ1886 glycine/betaine ABC transporter substrate-binding protein YP_008722935.1 2994999 D 1355100 CDS YP_008722936.1 556552609 17431755 2996183..2997367 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 2997367 17431755 P423_14675 Escherichia coli JJ1886 transporter YP_008722936.1 2996183 D 1355100 CDS YP_008722937.1 556552610 17431756 2997491..2998228 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 2998228 17431756 P423_14680 Escherichia coli JJ1886 membrane protein YP_008722937.1 2997491 D 1355100 CDS YP_008722938.1 556552611 17431757 2998218..2998553 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid ABC transporter permease 2998553 17431757 P423_14685 Escherichia coli JJ1886 branched-chain amino acid ABC transporter permease YP_008722938.1 2998218 D 1355100 CDS YP_008722939.1 556552612 17431758 2998644..2999174 1 NC_022648.1 DNA-binding transcriptional repressor of microcin B17 synthesis and multidrug efflux; negative regulator of the multidrug operon emrAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 2999174 17431758 P423_14690 Escherichia coli JJ1886 transcriptional regulator YP_008722939.1 2998644 D 1355100 CDS YP_008722940.1 556552613 17431759 2999301..3000473 1 NC_022648.1 with ErmA and TolC forms a multidrug efflux system; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 3000473 17431759 P423_14695 Escherichia coli JJ1886 multidrug transporter YP_008722940.1 2999301 D 1355100 CDS YP_008722941.1 556552614 17431760 3000490..3002028 1 NC_022648.1 multidrug MFS transporte; with EmrA is involved in resistance to hydrophobic antibiotics such as nalidixic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein B 3002028 emrB 17431760 emrB Escherichia coli JJ1886 multidrug resistance protein B YP_008722941.1 3000490 D 1355100 CDS YP_008722942.1 556554713 17431761 3002286..3002993 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 2'-5' RNA ligase 3002993 17431761 P423_14705 Escherichia coli JJ1886 2'-5' RNA ligase YP_008722942.1 3002286 D 1355100 CDS YP_008722943.1 556554714 17431762 3002990..3004102 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3004102 17431762 P423_14710 Escherichia coli JJ1886 hypothetical protein YP_008722943.1 3002990 D 1355100 CDS YP_008722944.1 556552615 17431763 complement(3004153..3004668) 1 NC_022648.1 catalyzes the hydrolysis of S-ribosylhomocysteine to homocysteine and autoinducer-2; Derived by automated computational analysis using gene prediction method: Protein Homology.; S-ribosylhomocysteinase 3004668 17431763 P423_14715 Escherichia coli JJ1886 S-ribosylhomocysteinase YP_008722944.1 3004153 R 1355100 CDS YP_008722945.1 556552616 17431764 complement(3004818..3006374) 1 NC_022648.1 involved in the first step of glutathione biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate--cysteine ligase 3006374 17431764 P423_14720 Escherichia coli JJ1886 glutamate--cysteine ligase YP_008722945.1 3004818 R 1355100 CDS YP_008722946.1 556552617 17431765 complement(3006447..3006875) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3006875 17431765 P423_14725 Escherichia coli JJ1886 membrane protein YP_008722946.1 3006447 R 1355100 CDS YP_008722947.1 556552618 17431766 complement(3006872..3007438) 1 NC_022648.1 YqaB; catalyzes the dephosphorylation of fructose 1-phosphate, 6-phosphogluconate and p-nitrophenyl phosphate (pNPP); presents beta-phosphoglucomutase activity at a lower extent; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-1-P/6-phosphogluconate phosphatase 3007438 17431766 P423_14730 Escherichia coli JJ1886 fructose-1-P/6-phosphogluconate phosphatase YP_008722947.1 3006872 R 1355100 CDS YP_008722948.1 556552619 17431772 complement(3008627..3008812) 1 NC_022648.1 affects carbohydrate metabolism; has regulatory role in many processes; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon storage regulator 3008812 17431772 P423_14765 Escherichia coli JJ1886 carbon storage regulator YP_008722948.1 3008627 R 1355100 CDS YP_008722949.1 556552620 17431773 complement(3009047..3011677) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alanyl-tRNA synthetase 3011677 17431773 P423_14770 Escherichia coli JJ1886 alanyl-tRNA synthetase YP_008722949.1 3009047 R 1355100 CDS YP_008722950.1 556552621 17431774 complement(3011806..3012306) 1 NC_022648.1 binds RecA and inhibits RecA-mediated DNA strand exchange and ATP hydrolysis and coprotease activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombination protein RecX 3012306 recX 17431774 recX Escherichia coli JJ1886 recombination protein RecX YP_008722950.1 3011806 R 1355100 CDS YP_008722951.1 556552622 17431775 complement(3012375..3013436) 1 NC_022648.1 catalyzes the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase RecA 3013436 recA 17431775 recA Escherichia coli JJ1886 recombinase RecA YP_008722951.1 3012375 R 1355100 CDS YP_008722952.1 556552623 17431776 complement(3013516..3014013) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3014013 17431776 P423_14785 Escherichia coli JJ1886 hypothetical protein YP_008722952.1 3013516 R 1355100 CDS YP_008722953.1 556554715 17431777 3014195..3014434 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 3014434 17431777 P423_14790 Escherichia coli JJ1886 membrane protein YP_008722953.1 3014195 D 1355100 CDS YP_008722954.1 556552624 17431778 complement(3014473..3015558) 1 NC_022648.1 membrane-bound lytic murein transglycosylase B; catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein hydrolase B 3015558 17431778 P423_14795 Escherichia coli JJ1886 murein hydrolase B YP_008722954.1 3014473 R 1355100 CDS YP_008722955.1 556554716 17431779 3015595..3015738 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3015738 17431779 P423_14800 Escherichia coli JJ1886 hypothetical protein YP_008722955.1 3015595 D 1355100 CDS YP_008722956.1 556552625 17431780 3015815..3016378 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates along with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbitol transporter subunit IIC 3016378 srlA 17431780 srlA Escherichia coli JJ1886 PTS sorbitol transporter subunit IIC YP_008722956.1 3015815 D 1355100 CDS YP_008722957.1 556552626 17431781 3016375..3017334 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbitol transporter subunit IIB 3017334 srlE 17431781 srlE Escherichia coli JJ1886 PTS sorbitol transporter subunit IIB YP_008722957.1 3016375 D 1355100 CDS YP_008722958.1 556552627 17431782 3017345..3017716 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbitol transporter subunit IIA 3017716 17431782 P423_14815 Escherichia coli JJ1886 PTS sorbitol transporter subunit IIA YP_008722958.1 3017345 D 1355100 CDS YP_008722959.1 556552628 17431783 3017720..3018499 1 NC_022648.1 catalyzes the conversion of sorbitol 6-phosphate into fructose 6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sorbitol-6-phosphate dehydrogenase 3018499 17431783 P423_14820 Escherichia coli JJ1886 sorbitol-6-phosphate dehydrogenase YP_008722959.1 3017720 D 1355100 CDS YP_008722960.1 556552629 17431784 3018605..3018964 1 NC_022648.1 regulator for glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3018964 17431784 P423_14825 Escherichia coli JJ1886 transcriptional regulator YP_008722960.1 3018605 D 1355100 CDS YP_008722961.1 556552630 17431785 3019031..3019804 1 NC_022648.1 regulates genes involved in glucitol utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3019804 srlR 17431785 srlR Escherichia coli JJ1886 transcriptional regulator YP_008722961.1 3019031 D 1355100 CDS YP_008722962.1 556552631 17431786 3019797..3020762 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose 5-phosphate isomerase 3020762 17431786 P423_14835 Escherichia coli JJ1886 arabinose 5-phosphate isomerase YP_008722962.1 3019797 D 1355100 CDS YP_008722963.1 556552632 17431787 complement(3020759..3022273) 1 NC_022648.1 Required for the expression of anaerobic nitric oxide (NO) reductase; acts as a transcriptional activator for the norVW operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3022273 17431787 P423_14840 Escherichia coli JJ1886 transcriptional regulator YP_008722963.1 3020759 R 1355100 CDS YP_008722964.1 556552633 17431788 3022460..3023899 1 NC_022648.1 detoxifies nitric oxide using NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitric oxide reductase 3023899 17431788 P423_14845 Escherichia coli JJ1886 nitric oxide reductase YP_008722964.1 3022460 D 1355100 CDS YP_008722965.1 556552634 17431789 3023896..3025029 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH:flavorubredoxin oxidoreductase 3025029 17431789 P423_14850 Escherichia coli JJ1886 NADH:flavorubredoxin oxidoreductase YP_008722965.1 3023896 D 1355100 CDS YP_008722966.1 556552635 17431790 complement(3025251..3027551) 1 NC_022648.1 carbamoyltransferase; involved in the formation of the cyanate group of hydrogenase; catalyzes the formation of carbamoyladenylate from carbamoylphosphate and then transfers the carbamoyl group to HypE; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl phosphate phosphatase 3027551 17431790 P423_14855 Escherichia coli JJ1886 carbamoyl phosphate phosphatase YP_008722966.1 3025251 R 1355100 CDS YP_008722967.1 556552636 17431791 complement(3027656..3028183) 1 NC_022648.1 involved in electron transport from formate to hydrogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-H ferredoxin subunit 3028183 17431791 P423_14860 Escherichia coli JJ1886 formate dehydrogenase-H ferredoxin subunit YP_008722967.1 3027656 R 1355100 CDS YP_008722968.1 556554717 17431792 3028291..3028494 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3028494 17431792 P423_14865 Escherichia coli JJ1886 hypothetical protein YP_008722968.1 3028291 D 1355100 CDS YP_008722969.1 556554718 17431793 3028611..3029048 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3029048 17431793 P423_14870 Escherichia coli JJ1886 hypothetical protein YP_008722969.1 3028611 D 1355100 CDS YP_008722970.1 556552637 17431794 complement(3029140..3029559) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 3029559 17431794 P423_14875 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008722970.1 3029140 R 1355100 CDS YP_008722971.1 556554719 17431795 complement(3029585..3029752) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3029752 17431795 P423_14880 Escherichia coli JJ1886 hypothetical protein YP_008722971.1 3029585 R 1355100 CDS YP_008722972.1 556552638 17431796 complement(3029795..3030262) 1 NC_022648.1 involved in the C-terminal processing of the large subunit of hydrogenase 3 HycE; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 maturation protease 3030262 hycI 17431796 hycI Escherichia coli JJ1886 hydrogenase 3 maturation protease YP_008722972.1 3029795 R 1355100 CDS YP_008722973.1 556552639 17431797 complement(3030255..3030665) 1 NC_022648.1 required for the maturation of the formate hydrogenlyase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase maturation protein HycH 3030665 17431797 P423_14890 Escherichia coli JJ1886 formate hydrogenlyase maturation protein HycH YP_008722973.1 3030255 R 1355100 CDS YP_008722974.1 556552640 17431798 complement(3030662..3031429) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 7 3031429 17431798 P423_14895 Escherichia coli JJ1886 formate hydrogenlyase subunit 7 YP_008722974.1 3030662 R 1355100 CDS YP_008722975.1 556552641 17431799 complement(3031429..3031971) 1 NC_022648.1 electron transfer protein for hydrogenase-3; the formate hydrogenlyase complex comprises of a formate dehydrogenase, unidentified electron carriers and hydrogenase-3; in this non-energy conserving pathway, molecular hydrogen and carbodioxide are released from formate; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase complex iron-sulfur subunit 3031971 17431799 P423_14900 Escherichia coli JJ1886 formate hydrogenlyase complex iron-sulfur subunit YP_008722975.1 3031429 R 1355100 CDS YP_008722976.1 556552642 17431800 complement(3031981..3033690) 1 NC_022648.1 formate hydrogenlyase subunit 5; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 large subunit 3033690 hycE 17431800 hycE Escherichia coli JJ1886 hydrogenase 3 large subunit YP_008722976.1 3031981 R 1355100 CDS YP_008722977.1 556552643 17431801 complement(3033708..3034631) 1 NC_022648.1 formate hydrogenlyase subunit 4; HycBCDEFG is part of the formate hydrogenlyase system which is involved in the cleaving of formate to dihydrogen and carbon dioxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3 membrane subunit 3034631 hycD 17431801 hycD Escherichia coli JJ1886 hydrogenase 3 membrane subunit YP_008722977.1 3033708 R 1355100 CDS YP_008722978.1 556552644 17431802 complement(3034634..3036460) 1 NC_022648.1 catalyzes the oxidation of formate to carbon dioxide and molecular hydrogen; formate hydrogenlyase comprises of a formate dehydrogenase, unidentified electron carriers and a hydrogenase (subunit 3); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 3 3036460 17431802 P423_14915 Escherichia coli JJ1886 formate hydrogenlyase subunit 3 YP_008722978.1 3034634 R 1355100 CDS YP_008722979.1 556552645 17431803 complement(3036457..3037068) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase subunit 2 3037068 17431803 P423_14920 Escherichia coli JJ1886 formate hydrogenlyase subunit 2 YP_008722979.1 3036457 R 1355100 CDS YP_008722980.1 556552646 17431804 complement(3037193..3037654) 1 NC_022648.1 regulates several genes involved in the formate hydrogenlyase system; seems to prevent binding of FhlA transcriptional activator to the activator sequence of hyc operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate hydrogenlyase regulatory protein HycA 3037654 17431804 P423_14925 Escherichia coli JJ1886 formate hydrogenlyase regulatory protein HycA YP_008722980.1 3037193 R 1355100 CDS YP_008722981.1 556552647 17431805 3037854..3038216 1 NC_022648.1 plays a role in hydrogenase nickel cofactor insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase nickel incorporation protein 3038216 hypA 17431805 hypA Escherichia coli JJ1886 hydrogenase nickel incorporation protein YP_008722981.1 3037854 D 1355100 CDS YP_008722982.1 556552648 17431806 3038220..3039092 1 NC_022648.1 GTP hydrolase involved in nickel liganding into hydrogenases; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase nickel incorporation protein HypB 3039092 17431806 P423_14935 Escherichia coli JJ1886 hydrogenase nickel incorporation protein HypB YP_008722982.1 3038220 D 1355100 CDS YP_008722983.1 556552649 17431807 3039083..3039355 1 NC_022648.1 HypC; accessory protein necessary for maturation of the hydrogenase isoforms 1, 2 and 3; forms a complex with HypD, HypE, and HypF proteins, which is the site of ligand biosynthesis and attachment to the iron atom of the NiFe site in the hydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase assembly chaperone 3039355 17431807 P423_14940 Escherichia coli JJ1886 hydrogenase assembly chaperone YP_008722983.1 3039083 D 1355100 CDS YP_008722984.1 556552650 17431808 3039355..3040476 1 NC_022648.1 necessary for the synthesis of all three hydrogenase isoenzymes; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase formation protein HypD 3040476 17431808 P423_14945 Escherichia coli JJ1886 hydrogenase formation protein HypD YP_008722984.1 3039355 D 1355100 CDS YP_008722985.1 556552651 17431809 3040473..3041483 1 NC_022648.1 hydrogenase isoenzymes formation protein; involved in the formation of the cyanate group of the large subunit of the hydrogenase; catalyzes the formation of thiocyanate from thiocarbamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamoyl dehydratase 3041483 17431809 P423_14950 Escherichia coli JJ1886 carbamoyl dehydratase YP_008722985.1 3040473 D 1355100 CDS YP_008722986.1 556552652 17431810 3041557..3043635 1 NC_022648.1 regulates the expression of formate dehydrogenase H and hydrogenase-3 structural genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3043635 17431810 P423_14955 Escherichia coli JJ1886 transcriptional regulator YP_008722986.1 3041557 D 1355100 CDS YP_008722987.1 556554720 17431811 3043680..3044108 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transporter 3044108 17431811 P423_14960 Escherichia coli JJ1886 transporter YP_008722987.1 3043680 D 1355100 CDS YP_008722988.1 556552653 17431812 complement(3044147..3044491) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3044491 17431812 P423_14965 Escherichia coli JJ1886 hypothetical protein YP_008722988.1 3044147 R 1355100 CDS YP_008722989.1 556552654 17431813 complement(3044546..3044701) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3044701 17431813 P423_14970 Escherichia coli JJ1886 hypothetical protein YP_008722989.1 3044546 R 1355100 CDS YP_008722990.1 556552655 17431814 3044777..3047338 1 NC_022648.1 This protein performs the mismatch recognition step during the DNA repair process; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA mismatch repair protein MutS 3047338 17431814 P423_14975 Escherichia coli JJ1886 DNA mismatch repair protein MutS YP_008722990.1 3044777 D 1355100 CDS YP_008722991.1 556552656 17431815 3047444..3048100 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine protein phosphatase 3048100 17431815 P423_14980 Escherichia coli JJ1886 serine/threonine protein phosphatase YP_008722991.1 3047444 D 1355100 CDS YP_008722992.1 556552657 17431816 complement(3048151..3048918) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 3048918 17431816 P423_14985 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008722992.1 3048151 R 1355100 CDS YP_008722993.1 556552658 17431817 3049114..3050022 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3050022 17431817 P423_14990 Escherichia coli JJ1886 oxidoreductase YP_008722993.1 3049114 D 1355100 CDS YP_008722994.1 556552659 17431818 3050019..3051281 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3051281 17431818 P423_14995 Escherichia coli JJ1886 membrane protein YP_008722994.1 3050019 D 1355100 CDS YP_008722995.1 556554721 17431819 3051278..3051916 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; aldolase 3051916 17431819 P423_15000 Escherichia coli JJ1886 aldolase YP_008722995.1 3051278 D 1355100 CDS YP_008722996.1 556552660 17431820 3051921..3052697 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxypyruvate isomerase 3052697 17431820 P423_15005 Escherichia coli JJ1886 hydroxypyruvate isomerase YP_008722996.1 3051921 D 1355100 CDS YP_008722997.1 556552661 17431821 3052786..3054150 1 NC_022648.1 member of the Gnt family of gluconate transporters; not involved in gluconate transport; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3054150 17431821 P423_15010 Escherichia coli JJ1886 transporter YP_008722997.1 3052786 D 1355100 CDS YP_008722998.1 556554722 17431822 complement(3054293..3055159) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lactamase 3055159 17431822 P423_15015 Escherichia coli JJ1886 lactamase YP_008722998.1 3054293 R 1355100 CDS YP_008722999.1 556554723 17431823 3055561..3056112 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; NADPH-dependent FMN reductase 3056112 17431823 P423_15020 Escherichia coli JJ1886 NADPH-dependent FMN reductase YP_008722999.1 3055561 D 1355100 CDS YP_008723000.1 556554724 17431824 complement(3056283..3057116) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3057116 17431824 P423_15025 Escherichia coli JJ1886 hypothetical protein YP_008723000.1 3056283 R 1355100 CDS YP_008723001.1 556554725 17431825 complement(3057135..3057275) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA polymerase sigma factor 3057275 17431825 P423_15030 Escherichia coli JJ1886 RNA polymerase sigma factor YP_008723001.1 3057135 R 1355100 CDS YP_008723002.1 556552662 17431826 complement(3057338..3058477) 1 NC_022648.1 outer membrane lipoprotein involved in stationary-phase cell survival; similar to LppB virulence determinant from Haemophilus somnus; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein NlpD 3058477 nlpD 17431826 nlpD Escherichia coli JJ1886 lipoprotein NlpD YP_008723002.1 3057338 R 1355100 CDS YP_008723003.1 556552663 17431827 complement(3058617..3059243) 1 NC_022648.1 catalyzes the methyl esterification of L-isoaspartyl residues that are formed in damaged proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-L-isoaspartate O-methyltransferase 3059243 pcm 17431827 pcm Escherichia coli JJ1886 protein-L-isoaspartate O-methyltransferase YP_008723003.1 3058617 R 1355100 CDS YP_008723004.1 556552664 17431828 complement(3059237..3059998) 1 NC_022648.1 broad specificity 5'(3')-nucleotidase and polyphosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.; stationary phase survival protein SurE 3059998 surE 17431828 surE Escherichia coli JJ1886 stationary phase survival protein SurE YP_008723004.1 3059237 R 1355100 CDS YP_008723005.1 556552665 17431829 complement(3059979..3061028) 1 NC_022648.1 catalyzes the modification of U13 in tRNA(Glu); Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase D 3061028 truD 17431829 truD Escherichia coli JJ1886 tRNA pseudouridine synthase D YP_008723005.1 3059979 R 1355100 CDS YP_008723006.1 556552666 17431830 complement(3061025..3061504) 1 NC_022648.1 catalyzes the conversion of 4-diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate into 2-C-methyl-D-erythritol 2,4-cyclodiphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase 3061504 ispF 17431830 ispF Escherichia coli JJ1886 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase YP_008723006.1 3061025 R 1355100 CDS YP_008723007.1 556552667 17431831 complement(3061504..3062214) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 3062214 17431831 P423_15060 Escherichia coli JJ1886 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase YP_008723007.1 3061504 R 1355100 CDS YP_008723008.1 556552668 17431832 complement(3062233..3062544) 1 NC_022648.1 forms a complex with FtsL and FtsQ; colocalizes to the septal region of the dividing cell; membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsB 3062544 ftsB 17431832 ftsB Escherichia coli JJ1886 cell division protein FtsB YP_008723008.1 3062233 R 1355100 CDS YP_008723009.1 556552669 17431833 complement(3062737..3063060) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3063060 17431833 P423_15070 Escherichia coli JJ1886 membrane protein YP_008723009.1 3062737 R 1355100 CDS YP_008723010.1 556552670 17431834 complement(3063109..3063714) 1 NC_022648.1 converts ATP and adenylyl sulfate to ADP and 3'-phosphoadenylyl sulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylylsulfate kinase 3063714 17431834 P423_15075 Escherichia coli JJ1886 adenylylsulfate kinase YP_008723010.1 3063109 R 1355100 CDS YP_008723011.1 556552671 17431835 complement(3063714..3065141) 1 NC_022648.1 may be GTPase that regulates ATP sulfurylase activity that is involved in converting ATP and sulfate to diphosphate and adenylylsulfate; in Escherichia coli this enzyme functions in cysteine biosynthesis in the first step; forms a heterodimer with CysD; part of the GTP-binding elongation factor family CysN/NodQ; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate adenylyltransferase subunit 1 3065141 cysN 17431835 cysN Escherichia coli JJ1886 sulfate adenylyltransferase subunit 1 YP_008723011.1 3063714 R 1355100 CDS YP_008723012.1 556552672 17431836 complement(3065143..3066051) 1 NC_022648.1 with CysN catalyzes the formation of adenylylsulfate from sulfate and ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate adenylyltransferase subunit 2 3066051 17431836 P423_15085 Escherichia coli JJ1886 sulfate adenylyltransferase subunit 2 YP_008723012.1 3065143 R 1355100 CDS YP_008723013.1 556552673 17431837 3066303..3067340 1 NC_022648.1 catalyzes the sequential removal of 2 amino-terminal arginines from alkaline phosphatase isozyme 1 to form isozymes 2 and 3; Derived by automated computational analysis using gene prediction method: Protein Homology.; alkaline phosphatase isozyme conversion aminopeptidase 3067340 17431837 P423_15090 Escherichia coli JJ1886 alkaline phosphatase isozyme conversion aminopeptidase YP_008723013.1 3066303 D 1355100 CDS YP_008723014.1 556552674 17431838 complement(3067466..3067618) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3067618 17431838 P423_15095 Escherichia coli JJ1886 hypothetical protein YP_008723014.1 3067466 R 1355100 CDS YP_008723015.1 556552675 17431839 complement(3067884..3068618) 1 NC_022648.1 catalyzes the reduction of 3'-phosphoadenylyl sulfate into sulfite; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoadenosine phosphosulfate reductase 3068618 17431839 P423_15100 Escherichia coli JJ1886 phosphoadenosine phosphosulfate reductase YP_008723015.1 3067884 R 1355100 CDS YP_008723016.1 556552676 17431840 complement(3068692..3070404) 1 NC_022648.1 hemoprotein; NADPH dependent; with the alpha subunit (a flavoprotein) catalyzes the reduction of sulfite to sulfide; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfite reductase subunit beta 3070404 17431840 P423_15105 Escherichia coli JJ1886 sulfite reductase subunit beta YP_008723016.1 3068692 R 1355100 CDS YP_008723017.1 556552677 17431841 complement(3070404..3072203) 1 NC_022648.1 catalyzes the reduction of sulfite to sulfide in the biosynthesis of L-cysteine from sulfate; a flavoprotein with flavin reductase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfite reductase subunit alpha 3072203 cysJ 17431841 cysJ Escherichia coli JJ1886 sulfite reductase subunit alpha YP_008723017.1 3070404 R 1355100 CDS YP_008723018.1 556552678 17431842 3072519..3072884 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-carboxy-5,6,7,8-tetrahydropterin synthase 3072884 17431842 P423_15115 Escherichia coli JJ1886 6-carboxy-5,6,7,8-tetrahydropterin synthase YP_008723018.1 3072519 D 1355100 CDS YP_008723019.1 556552679 17431843 3072962..3074233 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-dependent oxidoreductase 3074233 17431843 P423_15120 Escherichia coli JJ1886 FAD-dependent oxidoreductase YP_008723019.1 3072962 D 1355100 CDS YP_008723020.1 556552680 17431844 3074224..3074484 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin 3074484 17431844 P423_15125 Escherichia coli JJ1886 ferredoxin YP_008723020.1 3074224 D 1355100 CDS YP_008723021.1 556552681 17431845 3074501..3075076 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3075076 17431845 P423_15130 Escherichia coli JJ1886 hypothetical protein YP_008723021.1 3074501 D 1355100 CDS YP_008723022.1 556552682 17431846 complement(3075224..3076084) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein 3076084 17431846 P423_15135 Escherichia coli JJ1886 electron transfer flavoprotein YP_008723022.1 3075224 R 1355100 CDS YP_008723023.1 556552683 17431847 complement(3076081..3076860) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein subunit YgcR 3076860 17431847 P423_15140 Escherichia coli JJ1886 electron transfer flavoprotein subunit YgcR YP_008723023.1 3076081 R 1355100 CDS YP_008723024.1 556552684 17431848 complement(3076838..3078175) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; major facilitator transporter 3078175 17431848 P423_15145 Escherichia coli JJ1886 major facilitator transporter YP_008723024.1 3076838 R 1355100 CDS YP_008723025.1 556552685 17431849 complement(3078269..3079723) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-linked oxidoreductase 3079723 17431849 P423_15150 Escherichia coli JJ1886 FAD-linked oxidoreductase YP_008723025.1 3078269 R 1355100 CDS YP_008723026.1 556552686 17431850 complement(3079793..3080578) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3080578 17431850 P423_15155 Escherichia coli JJ1886 oxidoreductase YP_008723026.1 3079793 R 1355100 CDS YP_008723027.1 556552687 17431851 3080897..3082174 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3082174 17431851 P423_15160 Escherichia coli JJ1886 membrane protein YP_008723027.1 3080897 D 1355100 CDS YP_008723028.1 556552688 17431852 3082201..3083679 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 3083679 17431852 P423_15165 Escherichia coli JJ1886 sugar kinase YP_008723028.1 3082201 D 1355100 CDS YP_008723029.1 556552689 17431853 3083844..3084764 1 NC_022648.1 phosphorylates aminoimidazole ribotide (AIR) which forms 4-amino-5-hydroxymethyl-2-methylpyrimidine phosphate (HMP-P); synthesis of HMP-P from AIR is complex and requires the product of thiC gene at least; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoimidazole riboside kinase 3084764 17431853 P423_15170 Escherichia coli JJ1886 aminoimidazole riboside kinase YP_008723029.1 3083844 D 1355100 CDS YP_008723030.1 556554726 17431854 3084932..3086449 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sucrose porin 3086449 17431854 P423_15175 Escherichia coli JJ1886 sucrose porin YP_008723030.1 3084932 D 1355100 CDS YP_008723031.1 556554727 17431855 3086510..3087880 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; PTS sugar transporter 3087880 17431855 P423_15180 Escherichia coli JJ1886 PTS sugar transporter YP_008723031.1 3086510 D 1355100 CDS YP_008723032.1 556552690 17431856 3087886..3089289 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl hydrolase family 32 3089289 17431856 P423_15185 Escherichia coli JJ1886 glycosyl hydrolase family 32 YP_008723032.1 3087886 D 1355100 CDS YP_008723033.1 556554728 17431857 3089315..3090322 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sucrose operon repressor 3090322 17431857 P423_15190 Escherichia coli JJ1886 sucrose operon repressor YP_008723033.1 3089315 D 1355100 CDS YP_008723034.1 556552691 17431858 complement(3090407..3091078) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; coenzyme PQQ biosynthesis protein 3091078 17431858 P423_15195 Escherichia coli JJ1886 coenzyme PQQ biosynthesis protein YP_008723034.1 3090407 R 1355100 CDS YP_008723035.1 556554729 17431859 3091251..3091358 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3091358 17431859 P423_15200 Escherichia coli JJ1886 hypothetical protein YP_008723035.1 3091251 D 1355100 CDS YP_008723036.1 556554730 17431860 3091372..3092244 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3092244 17431860 P423_15205 Escherichia coli JJ1886 hypothetical protein YP_008723036.1 3091372 D 1355100 CDS YP_008723037.1 556552692 17431861 complement(3092304..3093602) 1 NC_022648.1 catalyzes the formation of phosphoenolpyruvate from 2-phospho-D-glycerate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; enolase 3093602 eno 17431861 eno Escherichia coli JJ1886 enolase YP_008723037.1 3092304 R 1355100 CDS YP_008723038.1 556552693 17431862 complement(3093690..3095327) 1 NC_022648.1 CTP synthase; cytidine triphosphate synthetase; catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen; in Escherichia coli this enzyme forms a homotetramer; Derived by automated computational analysis using gene prediction method: Protein Homology.; CTP synthetase 3095327 pyrG 17431862 pyrG Escherichia coli JJ1886 CTP synthetase YP_008723038.1 3093690 R 1355100 CDS YP_008723039.1 556552694 17431863 complement(3095555..3096346) 1 NC_022648.1 functions in degradation of stringent response intracellular messenger ppGpp; in Escherichia coli this gene is co-transcribed with the toxin/antitoxin genes mazEF; activity of MazG is inhibited by MazEF in vitro; ppGpp inhibits mazEF expression; MazG thus works in limiting the toxic activity of the MazF toxin induced during starvation; MazG also interacts with the GTPase protein Era; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate pyrophosphohydrolase 3096346 mazG 17431863 mazG Escherichia coli JJ1886 nucleoside triphosphate pyrophosphohydrolase YP_008723039.1 3095555 R 1355100 CDS YP_008723040.1 556552695 17431864 complement(3096442..3098676) 1 NC_022648.1 (p)ppGpp synthetase; catalyzes the formation of pppGpp and ppGpp from ATP and GTP or GDP; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP pyrophosphokinase 3098676 relA 17431864 relA Escherichia coli JJ1886 GTP pyrophosphokinase YP_008723040.1 3096442 R 1355100 CDS YP_008723041.1 556552696 17431865 complement(3098724..3100025) 1 NC_022648.1 in Escherichia coli this enzyme catalyzes the SAM-dependent methylation of U1939 in the 23S ribomal RNA; binds an iron-sulfur cluster [4Fe-4S]; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 3100025 rumA 17431865 rumA Escherichia coli JJ1886 23S rRNA methyltransferase YP_008723041.1 3098724 R 1355100 CDS YP_008723042.1 556552697 17431866 3100082..3102838 1 NC_022648.1 part of the two-component regulatory system with UvrY; involved in the regulation of carbon metabolism via the csrA/csrB regulatory system; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 3102838 17431866 P423_15235 Escherichia coli JJ1886 sensory histidine kinase YP_008723042.1 3100082 D 1355100 CDS YP_008723043.1 556552698 17431867 complement(3103069..3104409) 1 NC_022648.1 catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate dehydratase 3104409 gudD 17431867 gudD Escherichia coli JJ1886 glucarate dehydratase YP_008723043.1 3103069 R 1355100 CDS YP_008723044.1 556552699 17431868 complement(3104430..3105770) 1 NC_022648.1 catalyzes the formation of 5-keto-4-deoxy-D-glucarate from glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate dehydratase 3105770 gudD 17431868 gudD Escherichia coli JJ1886 glucarate dehydratase YP_008723044.1 3104430 R 1355100 CDS YP_008723045.1 556552700 17431869 complement(3105772..3107124) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate transporter 3107124 17431869 P423_15250 Escherichia coli JJ1886 glucarate transporter YP_008723045.1 3105772 R 1355100 CDS YP_008723046.1 556552701 17431870 complement(3107558..3108007) 1 NC_022648.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavodoxin 3108007 17431870 P423_15255 Escherichia coli JJ1886 flavodoxin YP_008723046.1 3107558 R 1355100 CDS YP_008723047.1 556552702 17431871 complement(3108025..3108807) 1 NC_022648.1 catalyzes formation of pseudouridine at position 65 in tRNA-Ile1 and tRNA-Asp; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase C 3108807 17431871 P423_15260 Escherichia coli JJ1886 tRNA pseudouridine synthase C YP_008723047.1 3108025 R 1355100 CDS YP_008723048.1 556552703 17431872 complement(3108807..3109136) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3109136 17431872 P423_15265 Escherichia coli JJ1886 hypothetical protein YP_008723048.1 3108807 R 1355100 CDS YP_008723049.1 556554731 17431873 complement(3109383..3109511) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3109511 17431873 P423_15270 Escherichia coli JJ1886 hypothetical protein YP_008723049.1 3109383 R 1355100 CDS YP_008723050.1 556552704 17431874 complement(3109758..3110303) 1 NC_022648.1 SecY regulator that either chelates excess SecY or negatively regulates the SecYE translocase function; Derived by automated computational analysis using gene prediction method: Protein Homology.; SecY interacting protein Syd 3110303 17431874 P423_15275 Escherichia coli JJ1886 SecY interacting protein Syd YP_008723050.1 3109758 R 1355100 CDS YP_008723051.1 556552705 17431875 3110371..3111219 1 NC_022648.1 catalyzes the NADPH-dependent reduction of 7-cyano-7-deazaguanine (preQ0) to 7-aminomethyl-7-deazaguanine (preQ1) in queuosine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 7-cyano-7-deazaguanine reductase 3111219 queF 17431875 queF Escherichia coli JJ1886 7-cyano-7-deazaguanine reductase YP_008723051.1 3110371 D 1355100 CDS YP_008723052.1 556552706 17431876 3111331..3112695 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LOG family protein ygdH 3112695 17431876 P423_15285 Escherichia coli JJ1886 LOG family protein ygdH YP_008723052.1 3111331 D 1355100 CDS YP_008723053.1 556552707 17431877 3113252..3114541 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine transporter 3114541 17431877 P423_15290 Escherichia coli JJ1886 serine/threonine transporter YP_008723053.1 3113252 D 1355100 CDS YP_008723054.1 556552708 17431878 3114599..3115966 1 NC_022648.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-serine dehydratase 3115966 17431878 P423_15295 Escherichia coli JJ1886 L-serine dehydratase YP_008723054.1 3114599 D 1355100 CDS YP_008723055.1 556552709 17431879 3115988..3116833 1 NC_022648.1 similar to flap endonuclease; FEN family; protein from E. coli does not have exonuclease activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease 3116833 17431879 P423_15300 Escherichia coli JJ1886 endonuclease YP_008723055.1 3115988 D 1355100 CDS YP_008723056.1 556552710 17431880 complement(3116938..3118086) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-1,2-propanediol oxidoreductase 3118086 17431880 P423_15305 Escherichia coli JJ1886 L-1,2-propanediol oxidoreductase YP_008723056.1 3116938 R 1355100 CDS YP_008723057.1 556552711 17431881 complement(3118114..3118761) 1 NC_022648.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fuculose phosphate aldolase 3118761 17431881 P423_15310 Escherichia coli JJ1886 fuculose phosphate aldolase YP_008723057.1 3118114 R 1355100 CDS YP_008723058.1 556552712 17431882 3119308..3120624 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-fucose transporter 3120624 17431882 P423_15315 Escherichia coli JJ1886 L-fucose transporter YP_008723058.1 3119308 D 1355100 CDS YP_008723059.1 556552713 17431883 3120657..3122432 1 NC_022648.1 catalyzes the conversion of the aldose L-fucose into the corresponding ketose L-fuculose; Derived by automated computational analysis using gene prediction method: Protein Homology.; fucose isomerase 3122432 fucI 17431883 fucI Escherichia coli JJ1886 fucose isomerase YP_008723059.1 3120657 D 1355100 CDS YP_008723060.1 556552714 17431884 3122511..3123959 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-fuculokinase 3123959 17431884 P423_15325 Escherichia coli JJ1886 L-fuculokinase YP_008723060.1 3122511 D 1355100 CDS YP_008723061.1 556552715 17431885 3123961..3124383 1 NC_022648.1 catalyzes the interconversion of alpha-L-fucose to beta-L-fucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-fucose mutarotase 3124383 fucU 17431885 fucU Escherichia coli JJ1886 L-fucose mutarotase YP_008723061.1 3123961 D 1355100 CDS YP_008723062.1 556552716 17431886 3124441..3125172 1 NC_022648.1 regulates expression of genes involved in L-fucose utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3125172 17431886 P423_15335 Escherichia coli JJ1886 transcriptional regulator YP_008723062.1 3124441 D 1355100 CDS YP_008723063.1 556552717 17431887 complement(3125216..3126316) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 3126316 17431887 P423_15340 Escherichia coli JJ1886 23S rRNA methyltransferase YP_008723063.1 3125216 R 1355100 CDS YP_008723064.1 556552718 17431888 complement(3126309..3126704) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3126704 17431888 P423_15345 Escherichia coli JJ1886 membrane protein YP_008723064.1 3126309 R 1355100 CDS YP_008723065.1 556552719 17431889 complement(3126723..3127640) 1 NC_022648.1 Glycine cleavage system transcriptional activator; activates the gcvTHP operon in the presence of glycine and represses the operon in its absence; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3127640 17431889 P423_15350 Escherichia coli JJ1886 transcriptional regulator YP_008723065.1 3126723 R 1355100 CDS YP_008723066.1 556552720 17431890 complement(3127991..3128218) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3128218 17431890 P423_15355 Escherichia coli JJ1886 hypothetical protein YP_008723066.1 3127991 R 1355100 CDS YP_008723067.1 556552721 17431891 3128410..3129615 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cysteine sulfinate desulfinase 3129615 17431891 P423_15360 Escherichia coli JJ1886 cysteine sulfinate desulfinase YP_008723067.1 3128410 D 1355100 CDS YP_008723068.1 556552722 17431892 3129615..3130058 1 NC_022648.1 binds and activates CsdA; Fe-S protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; CsdA-binding activator 3130058 17431892 P423_15365 Escherichia coli JJ1886 CsdA-binding activator YP_008723068.1 3129615 D 1355100 CDS YP_008723069.1 556552723 17431893 complement(3130109..3130915) 1 NC_022648.1 accepts sulfur from CsdA; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur acceptor protein CsdL 3130915 17431893 P423_15370 Escherichia coli JJ1886 sulfur acceptor protein CsdL YP_008723069.1 3130109 R 1355100 CDS YP_008723070.1 556552724 17431894 complement(3130992..3132089) 1 NC_022648.1 membrane-bound, lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein transglycosylase A 3132089 mltA 17431894 mltA Escherichia coli JJ1886 murein transglycosylase A YP_008723070.1 3130992 R 1355100 CDS YP_008723071.1 556552725 17431898 3133230..3133730 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3133730 17431898 P423_15395 Escherichia coli JJ1886 hypothetical protein YP_008723071.1 3133230 D 1355100 CDS YP_008723072.1 556554732 17431899 3133789..3135327 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; EvpB/family type VI secretion protein 3135327 17431899 P423_15400 Escherichia coli JJ1886 EvpB/family type VI secretion protein YP_008723072.1 3133789 D 1355100 CDS YP_008723073.1 556554733 17431900 3135345..3136682 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3136682 17431900 P423_15405 Escherichia coli JJ1886 hypothetical protein YP_008723073.1 3135345 D 1355100 CDS YP_008723074.1 556554734 17431901 3136679..3137344 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein ImpK 3137344 17431901 P423_15410 Escherichia coli JJ1886 type VI secretion protein ImpK YP_008723074.1 3136679 D 1355100 CDS YP_008723075.1 556554735 17431902 3137357..3139009 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; OmpA family protein 3139009 17431902 P423_15415 Escherichia coli JJ1886 OmpA family protein YP_008723075.1 3137357 D 1355100 CDS YP_008723076.1 556554736 17431903 3139067..3139558 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Hcp family type VI secretion system effector 3139558 17431903 P423_15420 Escherichia coli JJ1886 Hcp family type VI secretion system effector YP_008723076.1 3139067 D 1355100 CDS YP_008723077.1 556552726 17431904 3139749..3142385 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protein disaggregation chaperone 3142385 17431904 P423_15425 Escherichia coli JJ1886 protein disaggregation chaperone YP_008723077.1 3139749 D 1355100 CDS YP_008723078.1 556554737 17431905 3142397..3144721 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 3144721 17431905 P423_15430 Escherichia coli JJ1886 type IV secretion protein Rhs YP_008723078.1 3142397 D 1355100 CDS YP_008723079.1 556554738 17431906 3144733..3147096 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3147096 17431906 P423_15435 Escherichia coli JJ1886 hypothetical protein YP_008723079.1 3144733 D 1355100 CDS YP_008723080.1 556554739 17431907 3147093..3147950 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3147950 17431907 P423_15440 Escherichia coli JJ1886 hypothetical protein YP_008723080.1 3147093 D 1355100 CDS YP_008723081.1 556554740 17431908 3148414..3150792 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 3150792 17431908 P423_15445 Escherichia coli JJ1886 type IV secretion protein Rhs YP_008723081.1 3148414 D 1355100 CDS YP_008723082.1 556554741 17431909 3150795..3151616 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3151616 17431909 P423_15450 Escherichia coli JJ1886 hypothetical protein YP_008723082.1 3150795 D 1355100 CDS YP_008723083.1 556554742 17431910 3151660..3152187 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3152187 17431910 P423_15455 Escherichia coli JJ1886 hypothetical protein YP_008723083.1 3151660 D 1355100 CDS YP_008723084.1 556554743 17431911 3152184..3154052 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3154052 17431911 P423_15460 Escherichia coli JJ1886 hypothetical protein YP_008723084.1 3152184 D 1355100 CDS YP_008723085.1 556554744 17431912 3154158..3156671 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein Rhs 3156671 17431912 P423_15465 Escherichia coli JJ1886 type IV secretion protein Rhs YP_008723085.1 3154158 D 1355100 CDS YP_008723086.1 556554745 17431913 3156693..3157295 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3157295 17431913 P423_15470 Escherichia coli JJ1886 hypothetical protein YP_008723086.1 3156693 D 1355100 CDS YP_008723087.1 556554746 17431914 3157398..3157847 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3157847 17431914 P423_15475 Escherichia coli JJ1886 hypothetical protein YP_008723087.1 3157398 D 1355100 CDS YP_008723088.1 556554747 17431915 3157925..3159139 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3159139 17431915 P423_15480 Escherichia coli JJ1886 hypothetical protein YP_008723088.1 3157925 D 1355100 CDS YP_008723089.1 556554748 17431916 3159139..3160818 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3160818 17431916 P423_15485 Escherichia coli JJ1886 hypothetical protein YP_008723089.1 3159139 D 1355100 CDS YP_008723090.1 556554749 17431917 3161184..3162500 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3162500 17431917 P423_15490 Escherichia coli JJ1886 hypothetical protein YP_008723090.1 3161184 D 1355100 CDS YP_008723091.1 556554750 17431918 3162515..3163261 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATP-binding protein 3163261 17431918 P423_15495 Escherichia coli JJ1886 ATP-binding protein YP_008723091.1 3162515 D 1355100 CDS YP_008723092.1 556554751 17431919 3163312..3165114 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 3165114 17431919 P423_15500 Escherichia coli JJ1886 membrane protein YP_008723092.1 3163312 D 1355100 CDS YP_008723093.1 556554752 17431920 3165107..3166717 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3166717 17431920 P423_15505 Escherichia coli JJ1886 hypothetical protein YP_008723093.1 3165107 D 1355100 CDS YP_008723094.1 556554753 17431921 3166717..3168141 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; paar 3168141 17431921 P423_15510 Escherichia coli JJ1886 paar YP_008723094.1 3166717 D 1355100 CDS YP_008723095.1 556554754 17431922 3168134..3168556 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3168556 17431922 P423_15515 Escherichia coli JJ1886 hypothetical protein YP_008723095.1 3168134 D 1355100 CDS YP_008723096.1 556554755 17431923 3169116..3170876 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type VI secretion protein ImpG 3170876 17431923 P423_15520 Escherichia coli JJ1886 type VI secretion protein ImpG YP_008723096.1 3169116 D 1355100 CDS YP_008723097.1 556554756 17431924 3170840..3171919 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3171919 17431924 P423_15525 Escherichia coli JJ1886 hypothetical protein YP_008723097.1 3170840 D 1355100 CDS YP_008723098.1 556554757 17431925 3171900..3172244 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3172244 17431925 P423_15530 Escherichia coli JJ1886 hypothetical protein YP_008723098.1 3171900 D 1355100 CDS YP_008723099.1 556552727 17433813 complement(3173891..3174241) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 3174241 17433813 P423_15535 Escherichia coli JJ1886 isocitrate lyase YP_008723099.1 3173891 R 1355100 CDS YP_008723100.1 556554758 17431927 complement(3174238..3174663) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3174663 17431927 P423_15540 Escherichia coli JJ1886 transposase YP_008723100.1 3174238 R 1355100 CDS YP_008723101.1 556554759 17431928 3174799..3174975 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3174975 17431928 P423_15545 Escherichia coli JJ1886 hypothetical protein YP_008723101.1 3174799 D 1355100 CDS YP_008723102.1 556554760 17431929 3174979..3175407 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3175407 17431929 P423_15550 Escherichia coli JJ1886 hypothetical protein YP_008723102.1 3174979 D 1355100 CDS YP_008723103.1 556554761 17431930 3175407..3176783 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; impA family protein 3176783 17431930 P423_15555 Escherichia coli JJ1886 impA family protein YP_008723103.1 3175407 D 1355100 CDS YP_008723104.1 556554762 17431931 complement(3177083..3178030) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphoglycerate dehydrogenase 3178030 17431931 P423_15560 Escherichia coli JJ1886 phosphoglycerate dehydrogenase YP_008723104.1 3177083 R 1355100 CDS YP_008723105.1 556554763 17431932 complement(3178102..3178698) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; isomerase 3178698 17431932 P423_15565 Escherichia coli JJ1886 isomerase YP_008723105.1 3178102 R 1355100 CDS YP_008723106.1 556554764 17431933 complement(3178701..3179876) 1 NC_022648.1 catalyzes the formation of homocysteine and pyruvate from cystathionine; also acts a a negative regulator for the mal regulon but interacting with the transcriptional activator MalT; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; aminotransferase 3179876 17431933 P423_15570 Escherichia coli JJ1886 aminotransferase YP_008723106.1 3178701 R 1355100 CDS YP_008723107.1 556552728 17431934 complement(3179876..3181456) 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS); catalyzes the phosphorylation of maltose and glucose concomitant with their translocation across the cell membrane; component IIB catalyzes the phosphorylation of the sugar molecule; IIC forms the translocation channel and contains the substrate specific binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS maltose transporter subunit IICB 3181456 17431934 P423_15575 Escherichia coli JJ1886 PTS maltose transporter subunit IICB YP_008723107.1 3179876 R 1355100 CDS YP_008723108.1 556554765 17431935 complement(3181488..3182369) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3182369 17431935 P423_15580 Escherichia coli JJ1886 hypothetical protein YP_008723108.1 3181488 R 1355100 CDS YP_008723109.1 556552729 17431936 complement(3182570..3183823) 1 NC_022648.1 hydrolyzes the bond between N-acetylmuramic acid and amino acid residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 3183823 amiC 17431936 amiC Escherichia coli JJ1886 N-acetylmuramoyl-L-alanine amidase YP_008723109.1 3182570 R 1355100 CDS YP_008723110.1 556552730 17431937 3184055..3185386 1 NC_022648.1 catalyzes the formation of N-acetyl-L-glutamate from L-glutamate and acetyl-CoA in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylglutamate synthase 3185386 17431937 P423_15590 Escherichia coli JJ1886 N-acetylglutamate synthase YP_008723110.1 3184055 D 1355100 CDS YP_008723111.1 556552731 17431938 complement(3185468..3187294) 1 NC_022648.1 helicase/nuclease; with RecBC catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease V subunit alpha 3187294 recD 17431938 recD Escherichia coli JJ1886 exonuclease V subunit alpha YP_008723111.1 3185468 R 1355100 CDS YP_008723112.1 556552732 17431939 complement(3187294..3190836) 1 NC_022648.1 helicase/nuclease; with RecCD catalyzes the exonucleolytic cleavage of DNA; RecD has 5' to 3' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease V subunit beta 3190836 recB 17431939 recB Escherichia coli JJ1886 exonuclease V subunit beta YP_008723112.1 3187294 R 1355100 CDS YP_008723113.1 556552733 17431940 complement(3190829..3193717) 1 NC_022648.1 degrades small peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 3193717 17431940 P423_15605 Escherichia coli JJ1886 protease YP_008723113.1 3190829 R 1355100 CDS YP_008723114.1 556552734 17431941 complement(3193893..3197261) 1 NC_022648.1 catalyzes ATP-dependent exonucleolytic cleavage in either 5'- to 3'- or 3'- to 5'-direction to yield 5'-phosphooligonucleotides; component of the RecBCD (Exo V) helicase/nuclease complex that is essential for recombination; Derived by automated computational analysis using gene prediction method: Protein Homology.; exonuclease V subunit gamma 3197261 recC 17431941 recC Escherichia coli JJ1886 exonuclease V subunit gamma YP_008723114.1 3193893 R 1355100 CDS YP_008723115.1 556552735 17431942 complement(3197274..3197597) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3197597 17431942 P423_15615 Escherichia coli JJ1886 hypothetical protein YP_008723115.1 3197274 R 1355100 CDS YP_008723116.1 556552736 17431943 complement(3197582..3197989) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3197989 17431943 P423_15620 Escherichia coli JJ1886 hypothetical protein YP_008723116.1 3197582 R 1355100 CDS YP_008723117.1 556552737 17431944 complement(3197986..3198549) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3198549 17431944 P423_15625 Escherichia coli JJ1886 hypothetical protein YP_008723117.1 3197986 R 1355100 CDS YP_008723118.1 556552738 17431945 complement(3198540..3199010) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3199010 17431945 P423_15630 Escherichia coli JJ1886 hypothetical protein YP_008723118.1 3198540 R 1355100 CDS YP_008723119.1 556552739 17431946 complement(3199195..3199989) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidylate synthase 3199989 17431946 P423_15635 Escherichia coli JJ1886 thymidylate synthase YP_008723119.1 3199195 R 1355100 CDS YP_008723120.1 556552740 17431947 complement(3199996..3200871) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; prolipoprotein diacylglyceryl transferase 3200871 17431947 P423_15640 Escherichia coli JJ1886 prolipoprotein diacylglyceryl transferase YP_008723120.1 3199996 R 1355100 CDS YP_008723121.1 556552741 17431948 complement(3201022..3203268) 1 NC_022648.1 member of a second PTS chain involved in nitrogen metabolism; PtsP phosphorylates NPr; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate-protein phosphotransferase 3203268 17431948 P423_15645 Escherichia coli JJ1886 phosphoenolpyruvate-protein phosphotransferase YP_008723121.1 3201022 R 1355100 CDS YP_008723122.1 556552742 17431949 complement(3203281..3203811) 1 NC_022648.1 hydrolyzes diadenosine polyphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA pyrophosphohydrolase 3203811 17431949 P423_15650 Escherichia coli JJ1886 RNA pyrophosphohydrolase YP_008723122.1 3203281 R 1355100 CDS YP_008723123.1 556552743 17431950 3204496..3205185 1 NC_022648.1 MutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences during DNA repair; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA mismatch repair protein 3205185 17431950 P423_15655 Escherichia coli JJ1886 DNA mismatch repair protein YP_008723123.1 3204496 D 1355100 CDS YP_008723124.1 556552744 17431951 3205254..3205967 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3205967 17431951 P423_15660 Escherichia coli JJ1886 membrane protein YP_008723124.1 3205254 D 1355100 CDS YP_008723125.1 556552745 17431952 3206105..3206323 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3206323 17431952 P423_15665 Escherichia coli JJ1886 hypothetical protein YP_008723125.1 3206105 D 1355100 CDS YP_008723126.1 556552746 17431953 3206431..3207471 1 NC_022648.1 complements the prephenate dehydrogenase dysfunction of an Escherichia coli tyrosine auxotroph strain; member of the aldo/keto reductase 2 family; crystal structure of purified Escherichia coli protein shows bound NADPH; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldo-keto reductase 3207471 tas 17431953 tas Escherichia coli JJ1886 aldo-keto reductase YP_008723126.1 3206431 D 1355100 CDS YP_008723127.1 556552747 17431954 complement(3207503..3208696) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysophospholipid transporter LplT 3208696 17431954 P423_15675 Escherichia coli JJ1886 lysophospholipid transporter LplT YP_008723127.1 3207503 R 1355100 CDS YP_008723128.1 556552748 17431955 complement(3208689..3210848) 1 NC_022648.1 Transfers fatty acids to the 1-position via an enzyme-bound acyl-ACP intermediate in the presence of ATP and magnesium. Its physiological function is to regenerate phosphatidylethanolamine from 2-acyl-glycero-3-phosphoethanolamine (2-acyl-GPE) formed by transacylation reactions or degradation by phospholipase A1; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-acyl-glycerophospho-ethanolamine acyltransferase 3210848 17431955 P423_15680 Escherichia coli JJ1886 2-acyl-glycerophospho-ethanolamine acyltransferase YP_008723128.1 3208689 R 1355100 CDS YP_008723129.1 556552749 17431956 3211434..3212465 1 NC_022648.1 controls transcription of galETKM; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3212465 17431956 P423_15685 Escherichia coli JJ1886 transcriptional regulator YP_008723129.1 3211434 D 1355100 CDS YP_008723130.1 556552750 17431957 complement(3212472..3213734) 1 NC_022648.1 catalyzes the decarboxylation of diaminopimelate into lysine; pyridoxal phosphate(PLP)-binding; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminopimelate decarboxylase 3213734 17431957 P423_15690 Escherichia coli JJ1886 diaminopimelate decarboxylase YP_008723130.1 3212472 R 1355100 CDS YP_008723131.1 556552751 17431958 3213856..3214791 1 NC_022648.1 activates the transcription of the lysA gene encoding diaminopimelate decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3214791 17431958 P423_15695 Escherichia coli JJ1886 transcriptional regulator YP_008723131.1 3213856 D 1355100 CDS YP_008723132.1 556552752 17431959 complement(3214778..3215470) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; racemase 3215470 17431959 P423_15700 Escherichia coli JJ1886 racemase YP_008723132.1 3214778 R 1355100 CDS YP_008723133.1 556552753 17431960 complement(3215599..3217017) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-galactose transporter 3217017 17431960 P423_15705 Escherichia coli JJ1886 D-galactose transporter YP_008723133.1 3215599 R 1355100 CDS YP_008723134.1 556552754 17431961 complement(3217332..3218093) 1 NC_022648.1 catalyzes the formation of 3-dehydro-2-deoxy-D-gluconate from 2-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-deoxy-D-gluconate 3-dehydrogenase 3218093 17431961 P423_15710 Escherichia coli JJ1886 2-deoxy-D-gluconate 3-dehydrogenase YP_008723134.1 3217332 R 1355100 CDS YP_008723135.1 556552755 17431962 complement(3218123..3218959) 1 NC_022648.1 4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase; catalyzes the interconversion of 4-deoxy-L-threo-5-hexosulose uronate to 3-deoxy-D-glycero-2,5-hexodiulosonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-keto-4-deoxyuronate isomerase 3218959 17431962 P423_15715 Escherichia coli JJ1886 5-keto-4-deoxyuronate isomerase YP_008723135.1 3218123 R 1355100 CDS YP_008723136.1 556552756 17431963 complement(3219246..3220427) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA acetyltransferase 3220427 17431963 P423_15720 Escherichia coli JJ1886 acetyl-CoA acetyltransferase YP_008723136.1 3219246 R 1355100 CDS YP_008723137.1 556552757 17431964 3220682..3221911 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3221911 17431964 P423_15725 Escherichia coli JJ1886 transporter YP_008723137.1 3220682 D 1355100 CDS YP_008723138.1 556552758 17431966 complement(3222380..3223135) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3223135 17431966 P423_15735 Escherichia coli JJ1886 hypothetical protein YP_008723138.1 3222380 R 1355100 CDS YP_008723139.1 556552759 17431967 3223549..3225846 1 NC_022648.1 molybdenum cofactor-binding protein; participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit A 3225846 17431967 P423_15740 Escherichia coli JJ1886 xanthine dehydrogenase subunit A YP_008723139.1 3223549 D 1355100 CDS YP_008723140.1 556552760 17431968 3225857..3226735 1 NC_022648.1 FAD-binding subunit; with XdhA and XdhC participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit B 3226735 17431968 P423_15745 Escherichia coli JJ1886 xanthine dehydrogenase subunit B YP_008723140.1 3225857 D 1355100 CDS YP_008723141.1 556552761 17431969 3226732..3227211 1 NC_022648.1 iron-sulfur-binding subunit; with XdhA and XdhB participates in purine salvage; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine dehydrogenase subunit C 3227211 17431969 P423_15750 Escherichia coli JJ1886 xanthine dehydrogenase subunit C YP_008723141.1 3226732 D 1355100 CDS YP_008723142.1 556552762 17431970 complement(3227250..3229028) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 3229028 17431970 P423_15755 Escherichia coli JJ1886 Fis family transcriptional regulator YP_008723142.1 3227250 R 1355100 CDS YP_008723143.1 556552763 17431971 3229504..3230694 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine carbamoyltransferase 3230694 17431971 P423_15760 Escherichia coli JJ1886 ornithine carbamoyltransferase YP_008723143.1 3229504 D 1355100 CDS YP_008723144.1 556552764 17431972 3230752..3231948 1 NC_022648.1 catalyzes the formation of pyruvate from 2,3-diaminopropionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminopropionate ammonia-lyase 3231948 17431972 P423_15765 Escherichia coli JJ1886 diaminopropionate ammonia-lyase YP_008723144.1 3230752 D 1355100 CDS YP_008723145.1 556552765 17431973 3232006..3233217 1 NC_022648.1 Zn-dependent extracellular dipeptidase; similar to succinyl-diaminopimelate desuccinylases; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 3233217 17431973 P423_15770 Escherichia coli JJ1886 peptidase YP_008723145.1 3232006 D 1355100 CDS YP_008723146.1 556552766 17431974 3233270..3234655 1 NC_022648.1 catalyzes the hydrolytic cleavage of hydantoin with aromatic side chains at the 5'position; Derived by automated computational analysis using gene prediction method: Protein Homology.; phenylhydantoinase 3234655 17431974 P423_15775 Escherichia coli JJ1886 phenylhydantoinase YP_008723146.1 3233270 D 1355100 CDS YP_008723147.1 556552767 17431975 3234703..3235635 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamate kinase 3235635 17431975 P423_15780 Escherichia coli JJ1886 carbamate kinase YP_008723147.1 3234703 D 1355100 CDS YP_008723148.1 556552768 17431976 complement(3235676..3237301) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3237301 17431976 P423_15785 Escherichia coli JJ1886 hypothetical protein YP_008723148.1 3235676 R 1355100 CDS YP_008723149.1 556552769 17431977 complement(3237349..3238119) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3238119 17431977 P423_15790 Escherichia coli JJ1886 hypothetical protein YP_008723149.1 3237349 R 1355100 CDS YP_008723150.1 556552770 17431978 3238223..3238801 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Molybdenum cofactor cytidylyltransferase 3238801 17431978 P423_15795 Escherichia coli JJ1886 Molybdenum cofactor cytidylyltransferase YP_008723150.1 3238223 D 1355100 CDS YP_008723151.1 556552771 17431979 3239123..3242221 1 NC_022648.1 with YgfM and YgfN forms a selenate reductase, which seems to catalyze the reduction of selenate to selenite; YgfK mutants are unable to reduce selenate; involved in purine salvage process; seems to act as an oxidoreductase, but sequence similarity suggests it is a dihydrothymine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; selenate reductase 3242221 17431979 P423_15800 Escherichia coli JJ1886 selenate reductase YP_008723151.1 3239123 D 1355100 CDS YP_008723152.1 556552772 17431980 3242224..3243552 1 NC_022648.1 in Escherichia coli expression is induced in response to phase-specific signals and controlled by RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; chlorohydrolase/aminohydrolase 3243552 17431980 P423_15805 Escherichia coli JJ1886 chlorohydrolase/aminohydrolase YP_008723152.1 3242224 D 1355100 CDS YP_008723153.1 556552773 17431981 3243603..3244382 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3244382 17431981 P423_15810 Escherichia coli JJ1886 oxidoreductase YP_008723153.1 3243603 D 1355100 CDS YP_008723154.1 556552774 17431982 3244379..3247249 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypoxanthine oxidase 3247249 17431982 P423_15815 Escherichia coli JJ1886 hypoxanthine oxidase YP_008723154.1 3244379 D 1355100 CDS YP_008723155.1 556552775 17431983 3247414..3248814 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine permease 3248814 17431983 P423_15820 Escherichia coli JJ1886 xanthine permease YP_008723155.1 3247414 D 1355100 CDS YP_008723156.1 556552776 17431984 3248832..3250148 1 NC_022648.1 Catalyzes the deamination of guanine; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanine deaminase 3250148 17431984 P423_15825 Escherichia coli JJ1886 guanine deaminase YP_008723156.1 3248832 D 1355100 CDS YP_008723157.1 556552777 17431985 3250184..3251551 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permase 3251551 17431985 P423_15830 Escherichia coli JJ1886 permase YP_008723157.1 3250184 D 1355100 CDS YP_008723158.1 556552778 17431986 complement(3251587..3252075) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter 3252075 17431986 P423_15835 Escherichia coli JJ1886 electron transporter YP_008723158.1 3251587 R 1355100 CDS YP_008723159.1 556552779 17431987 complement(3252075..3253994) 1 NC_022648.1 unknown function; in E. coli the aegA gene is regulated by Fnr, NarXL, and NarQ (but not ArcA), induced under anaerobic conditions and repressed in the presence of nitrate (anaerobic); Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase Fe-S binding subunit 3253994 17431987 P423_15840 Escherichia coli JJ1886 oxidoreductase Fe-S binding subunit YP_008723159.1 3252075 R 1355100 CDS YP_008723160.1 556552780 17431988 3254430..3255878 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; purine permease 3255878 17431988 P423_15845 Escherichia coli JJ1886 purine permease YP_008723160.1 3254430 D 1355100 CDS YP_008723161.1 556554766 17431989 3255868..3256005 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3256005 17431989 P423_15850 Escherichia coli JJ1886 hypothetical protein YP_008723161.1 3255868 D 1355100 CDS YP_008723162.1 556552781 17431990 3256128..3256676 1 NC_022648.1 catalyzes the rearrangement of isopentenyl diphosphate to dimethylallyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; isopentenyl-diphosphate delta-isomerase 3256676 17431990 P423_15855 Escherichia coli JJ1886 isopentenyl-diphosphate delta-isomerase YP_008723162.1 3256128 D 1355100 CDS YP_008723163.1 556552782 17431991 complement(3256719..3258236) 1 NC_022648.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysyl-tRNA synthetase 3258236 lysS 17431991 lysS Escherichia coli JJ1886 lysyl-tRNA synthetase YP_008723163.1 3256719 R 1355100 CDS YP_008723164.1 556552783 17431992 complement(3258246..3259127) 1 NC_022648.1 recognizes the termination signals UAG and UAA during protein translation a specificity which is dependent on amino acid residues residing in loops of the L-shaped tRNA-like molecule of RF1; this protein is similar to release factor 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide chain release factor 1 3259127 prfA 17431992 prfA Escherichia coli JJ1886 peptide chain release factor 1 YP_008723164.1 3258246 R 1355100 CDS YP_008723165.1 556554767 17431993 3259128..3259283 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3259283 17431993 P423_15870 Escherichia coli JJ1886 hypothetical protein YP_008723165.1 3259128 D 1355100 CDS YP_008723166.1 556552784 17431994 complement(3259435..3261168) 1 NC_022648.1 5'-3' single-stranded-DNA-specific exonuclease; Derived by automated computational analysis using gene prediction method: Protein Homology.; ssDNA exonuclease RecJ 3261168 17431994 P423_15875 Escherichia coli JJ1886 ssDNA exonuclease RecJ YP_008723166.1 3259435 R 1355100 CDS YP_008723167.1 556552785 17431995 complement(3261174..3261884) 1 NC_022648.1 DsbC; periplasmic protein with protein disulfide isomerase activity; this protein also shows disulfide oxidoreductase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein-disulfide isomerase 3261884 17431995 P423_15880 Escherichia coli JJ1886 protein-disulfide isomerase YP_008723167.1 3261174 R 1355100 CDS YP_008723168.1 556552786 17431996 complement(3261909..3262805) 1 NC_022648.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; XerD specifically exchanges the bottom strands; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase XerD 3262805 xerD 17431996 xerD Escherichia coli JJ1886 tyrosine recombinase XerD YP_008723168.1 3261909 R 1355100 CDS YP_008723169.1 556552787 17431997 3262917..3263438 1 NC_022648.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavodoxin 3263438 17431997 P423_15890 Escherichia coli JJ1886 flavodoxin YP_008723169.1 3262917 D 1355100 CDS YP_008723170.1 556552788 17431998 complement(3263478..3263885) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3263885 17431998 P423_15895 Escherichia coli JJ1886 membrane protein YP_008723170.1 3263478 R 1355100 CDS YP_008723171.1 556552789 17431999 complement(3263866..3264132) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3264132 17431999 P423_15900 Escherichia coli JJ1886 hypothetical protein YP_008723171.1 3263866 R 1355100 CDS YP_008723172.1 556554768 17432000 3264125..3264301 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3264301 17432000 P423_15905 Escherichia coli JJ1886 hypothetical protein YP_008723172.1 3264125 D 1355100 CDS YP_008723173.1 556552790 17432001 3264375..3265355 1 NC_022648.1 physiological role is not clear; not essential for growth but mutants grow poorly; mutations suppress hda null mutations; may be involved in regulation of ATP-DnaA levels; may also be involved in regulation of tRNA modifications; can bind folic acid and tetrahydrofolate; forms a three domain ring-like structure with a central channel; structurally similar to DMGO protein from A. globiformis; shows sequence similarity to yeast CAF17 transcriptional regulato; Hda supressor; Derived by automated computational analysis using gene prediction method: Protein Homology.; global regulator 3265355 ygfZ 17432001 ygfZ Escherichia coli JJ1886 global regulator YP_008723173.1 3264375 D 1355100 CDS YP_008723174.1 556552791 17432002 complement(3265432..3266091) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hemolysin 3266091 17432002 P423_15915 Escherichia coli JJ1886 hemolysin YP_008723174.1 3265432 R 1355100 CDS YP_008723175.1 556552792 17432003 complement(3266255..3266566) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3266566 17432003 P423_15920 Escherichia coli JJ1886 hypothetical protein YP_008723175.1 3266255 R 1355100 CDS YP_008723176.1 556552793 17432004 3266605..3268044 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phospho-beta-glucosidase 3268044 17432004 P423_15925 Escherichia coli JJ1886 6-phospho-beta-glucosidase YP_008723176.1 3266605 D 1355100 CDS YP_008723177.1 556552794 17432005 complement(3268210..3271083) 1 NC_022648.1 acts in conjunction with GvcH to form H-protein-S-aminomethyldihydrolipoyllysine from glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine dehydrogenase 3271083 17432005 P423_15930 Escherichia coli JJ1886 glycine dehydrogenase YP_008723177.1 3268210 R 1355100 CDS YP_008723178.1 556552795 17432006 complement(3271202..3271591) 1 NC_022648.1 part of multienzyme complex composed of H, L, P, and T proteins which catalyzes oxidation of glycine to yield carbon dioxide, ammonia, 5,10-CH2-H4folate and a reduced pyridine nucleotide; protein H is involved in transfer of methylamine group from the P to T protein; covalently bound to a lipoyl cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine cleavage system protein H 3271591 17432006 P423_15935 Escherichia coli JJ1886 glycine cleavage system protein H YP_008723178.1 3271202 R 1355100 CDS YP_008723179.1 556552796 17432007 complement(3271615..3272709) 1 NC_022648.1 catalyzes the transfer of a methylene carbon from the methylamine-loaded GcvH protein to tetrahydrofolate, causing the release of ammonia and the generation of reduced GcvH protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycine cleavage system aminomethyltransferase T 3272709 gcvT 17432007 gcvT Escherichia coli JJ1886 glycine cleavage system aminomethyltransferase T YP_008723179.1 3271615 R 1355100 CDS YP_008723180.1 556552797 17432008 complement(3273157..3274359) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-octaprenyl-6-methoxyphenyl hydroxylase 3274359 17432008 P423_15945 Escherichia coli JJ1886 2-octaprenyl-6-methoxyphenyl hydroxylase YP_008723180.1 3273157 R 1355100 CDS YP_008723181.1 556552798 17432009 complement(3274382..3275560) 1 NC_022648.1 Oxygenase that introduces the hydroxyl group at carbon four of 2-octaprenyl-6-methoxyphenol resulting in the formation of 2-octaprenyl-6-methoxy-1,4-benzoquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-octaprenyl-6-methoxyphenyl hydroxylase 3275560 17432009 P423_15950 Escherichia coli JJ1886 2-octaprenyl-6-methoxyphenyl hydroxylase YP_008723181.1 3274382 R 1355100 CDS YP_008723182.1 556552799 17432010 complement(3275557..3276882) 1 NC_022648.1 exopeptidase able to cleave the peptide bond of the last amino acid if linked to a proline residue; substrate can be as short as a dipeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.; proline aminopeptidase P II 3276882 17432010 P423_15955 Escherichia coli JJ1886 proline aminopeptidase P II YP_008723182.1 3275557 R 1355100 CDS YP_008723183.1 556552800 17432011 complement(3276908..3277486) 1 NC_022648.1 the crystal structure of Haemophilus influenzae HI0817 showed that this protein forms dimers; function unknown; Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3277486 17432011 P423_15960 Escherichia coli JJ1886 hypothetical protein YP_008723183.1 3276908 R 1355100 CDS YP_008723184.1 556552801 17432012 3277654..3277983 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Z-ring-associated protein 3277983 17432012 P423_15965 Escherichia coli JJ1886 Z-ring-associated protein YP_008723184.1 3277654 D 1355100 CDS YP_008723185.1 556552802 17432013 3278229..3278831 1 NC_022648.1 ygfA expression increases five to eight fold in Escherichia coli cells growing as biofilms; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-formyltetrahydrofolate cyclo-ligase 3278831 17432013 P423_15970 Escherichia coli JJ1886 5-formyltetrahydrofolate cyclo-ligase YP_008723185.1 3278229 D 1355100 CDS YP_008723186.1 556552803 17432014 complement(3279220..3280452) 1 NC_022648.1 catalyzes the formation of 3-phosphonooxypyruvate from 3-phospho-D-glycerate in serine biosynthesis; can also reduce alpha ketoglutarate to form 2-hydroxyglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-phosphoglycerate dehydrogenase 3280452 17432014 P423_15975 Escherichia coli JJ1886 3-phosphoglycerate dehydrogenase YP_008723186.1 3279220 R 1355100 CDS YP_008723187.1 556552804 17432015 complement(3280708..3281403) 1 NC_022648.1 catalyzes D-ribose 5-phosphate --> D-ribulose 5-phosphate in the nonoxidative branch of the pentose phosphate pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose 5-phosphate isomerase 3281403 17432015 P423_15980 Escherichia coli JJ1886 ribose 5-phosphate isomerase YP_008723187.1 3280708 R 1355100 CDS YP_008723188.1 556554769 17432016 complement(3281423..3281653) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3281653 17432016 P423_15985 Escherichia coli JJ1886 hypothetical protein YP_008723188.1 3281423 R 1355100 CDS YP_008723189.1 556552805 17432017 3281794..3282687 1 NC_022648.1 specific inhibitor of chromosomal initiation of replication in vitro; binds the three 13-mers in the origin (oriC) to block initiation of replication; also controls genes involved in arginine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosome replication initiation inhibitor protein 3282687 17432017 P423_15990 Escherichia coli JJ1886 chromosome replication initiation inhibitor protein YP_008723189.1 3281794 D 1355100 CDS YP_008723190.1 556552806 17432018 3282890..3283945 1 NC_022648.1 MDM; functions in conversion of succinate to propionate; Derived by automated computational analysis using gene prediction method: Protein Homology.; methylmalonyl-CoA mutase 3283945 17432018 P423_15995 Escherichia coli JJ1886 methylmalonyl-CoA mutase YP_008723190.1 3282890 D 1355100 CDS YP_008723191.1 556552807 17432020 complement(3285006..3285746) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidative stress defense protein 3285746 17432020 P423_16005 Escherichia coli JJ1886 oxidative stress defense protein YP_008723191.1 3285006 R 1355100 CDS YP_008723192.1 556552808 17432021 complement(3285839..3286474) 1 NC_022648.1 Involved in the export of arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine exporter protein 3286474 17432021 P423_16010 Escherichia coli JJ1886 arginine exporter protein YP_008723192.1 3285839 R 1355100 CDS YP_008723193.1 556552809 17432022 complement(3286613..3287473) 1 NC_022648.1 participates in the regulation of osmotic pressure changes within the cel; Derived by automated computational analysis using gene prediction method: Protein Homology.; mechanosensitive channel MscS 3287473 17432022 P423_16015 Escherichia coli JJ1886 mechanosensitive channel MscS YP_008723193.1 3286613 R 1355100 CDS YP_008723194.1 556552810 17432023 complement(3287664..3288743) 1 NC_022648.1 catalyzes the formation of glycerone phosphate and glyceraldehyde 3-phosphate from fructose 1,6, bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 3288743 17432023 P423_16020 Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008723194.1 3287664 R 1355100 CDS YP_008723195.1 556552811 17432024 complement(3288957..3290120) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerate kinase 3290120 17432024 P423_16025 Escherichia coli JJ1886 phosphoglycerate kinase YP_008723195.1 3288957 R 1355100 CDS YP_008723196.1 556552812 17432025 complement(3290170..3291189) 1 NC_022648.1 required for glycolysis; catalyzes the formation of 3-phospho-D-glyceroyl phosphate from D-glyceraldehyde 3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glyceraldehyde-3-phosphate dehydrogenase 3291189 gapA 17432025 gapA Escherichia coli JJ1886 glyceraldehyde-3-phosphate dehydrogenase YP_008723196.1 3290170 R 1355100 CDS YP_008723197.1 556552813 17432026 3291561..3291992 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 3291992 17432026 P423_16035 Escherichia coli JJ1886 DNA-binding protein YP_008723197.1 3291561 D 1355100 CDS YP_008723198.1 556552814 17432027 3292015..3292593 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3292593 17432027 P423_16040 Escherichia coli JJ1886 membrane protein YP_008723198.1 3292015 D 1355100 CDS YP_008723199.1 556552815 17432028 3292594..3293301 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt ABC transporter permease 3293301 17432028 P423_16045 Escherichia coli JJ1886 cobalt ABC transporter permease YP_008723199.1 3292594 D 1355100 CDS YP_008723200.1 556552816 17432029 3293289..3293966 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cobalt ABC transporter ATP-binding protein 3293966 17432029 P423_16050 Escherichia coli JJ1886 cobalt ABC transporter ATP-binding protein YP_008723200.1 3293289 D 1355100 CDS YP_008723201.1 556552817 17432030 3293960..3294637 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 3294637 17432030 P423_16055 Escherichia coli JJ1886 ABC transporter ATP-binding protein YP_008723201.1 3293960 D 1355100 CDS YP_008723202.1 556552818 17432031 complement(3294609..3295322) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside triphosphate hydrolase 3295322 17432031 P423_16060 Escherichia coli JJ1886 nucleoside triphosphate hydrolase YP_008723202.1 3294609 R 1355100 CDS YP_008723203.1 556552819 17432032 complement(3295319..3295828) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mannitol repressor 3295828 17432032 P423_16065 Escherichia coli JJ1886 mannitol repressor YP_008723203.1 3295319 R 1355100 CDS YP_008723204.1 556552820 17432033 complement(3295850..3296815) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose 1,6-bisphosphatase 3296815 17432033 P423_16070 Escherichia coli JJ1886 fructose 1,6-bisphosphatase YP_008723204.1 3295850 R 1355100 CDS YP_008723205.1 556552821 17432034 complement(3296812..3298089) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-sorbose 1-phosphate reductase 3298089 17432034 P423_16075 Escherichia coli JJ1886 L-sorbose 1-phosphate reductase YP_008723205.1 3296812 R 1355100 CDS YP_008723206.1 556552822 17432035 complement(3298104..3299492) 1 NC_022648.1 CmtA with CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIBC 3299492 17432035 P423_16080 Escherichia coli JJ1886 PTS mannitol transporter subunit IIBC YP_008723206.1 3298104 R 1355100 CDS YP_008723207.1 556552823 17432036 complement(3299520..3299963) 1 NC_022648.1 TolM; with CmtA (IIBC), CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIA 3299963 cmtB 17432036 cmtB Escherichia coli JJ1886 PTS mannitol transporter subunit IIA YP_008723207.1 3299520 R 1355100 CDS YP_008723208.1 556554770 17432037 3300341..3301249 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; SPFH domain protein 3301249 17432037 P423_16090 Escherichia coli JJ1886 SPFH domain protein YP_008723208.1 3300341 D 1355100 CDS YP_008723209.1 556552824 17432038 complement(3301456..3303447) 1 NC_022648.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transketolase 3303447 17432038 P423_16100 Escherichia coli JJ1886 transketolase YP_008723209.1 3301456 R 1355100 CDS YP_008723210.1 556552825 17432039 3303725..3304483 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metalloprotease 3304483 17432039 P423_16105 Escherichia coli JJ1886 metalloprotease YP_008723210.1 3303725 D 1355100 CDS YP_008723211.1 556552826 17432040 complement(3304913..3305833) 1 NC_022648.1 catalyzes the formation of putrescine from agmatine; Derived by automated computational analysis using gene prediction method: Protein Homology.; agmatinase 3305833 17432040 P423_16110 Escherichia coli JJ1886 agmatinase YP_008723211.1 3304913 R 1355100 CDS YP_008723212.1 556552827 17432041 complement(3305969..3306700) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3306700 17432041 P423_16115 Escherichia coli JJ1886 membrane protein YP_008723212.1 3305969 R 1355100 CDS YP_008723213.1 556552828 17432042 complement(3306846..3308822) 1 NC_022648.1 catalyzes the formation of agmatine from arginine in putrescine and spermidine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine decarboxylase 3308822 17432042 P423_16120 Escherichia coli JJ1886 arginine decarboxylase YP_008723213.1 3306846 R 1355100 CDS YP_008723214.1 556552829 17432043 complement(3308831..3308977) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3308977 17432043 P423_16125 Escherichia coli JJ1886 hypothetical protein YP_008723214.1 3308831 R 1355100 CDS YP_008723215.1 556552830 17432044 complement(3309310..3309561) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3309561 17432044 P423_16130 Escherichia coli JJ1886 membrane protein YP_008723215.1 3309310 R 1355100 CDS YP_008723216.1 556552831 17432045 3309617..3310771 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; S-adenosylmethionine synthetase 3310771 17432045 P423_16135 Escherichia coli JJ1886 S-adenosylmethionine synthetase YP_008723216.1 3309617 D 1355100 CDS YP_008723217.1 556554771 17432046 3310848..3311048 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; S-adenosylmethionine synthetase 3311048 17432046 P423_16140 Escherichia coli JJ1886 S-adenosylmethionine synthetase YP_008723217.1 3310848 D 1355100 CDS YP_008723218.1 556552832 17432047 3311207..3312601 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-galactose transporter 3312601 17432047 P423_16145 Escherichia coli JJ1886 D-galactose transporter YP_008723218.1 3311207 D 1355100 CDS YP_008723219.1 556552833 17432048 3312678..3313175 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3313175 17432048 P423_16150 Escherichia coli JJ1886 hypothetical protein YP_008723219.1 3312678 D 1355100 CDS YP_008723220.1 556552834 17432049 3313270..3313977 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease 3313977 17432049 P423_16155 Escherichia coli JJ1886 endonuclease YP_008723220.1 3313270 D 1355100 CDS YP_008723221.1 556552835 17432050 3314057..3314788 1 NC_022648.1 in Escherichia coli RsmE methylates the N3 position of the U1498 base in 16S rRNA; cells lacking this function can grow, but are outcompeted by wild-type; SAM-dependent m(3)U1498 methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3314788 17432050 P423_16160 Escherichia coli JJ1886 16S rRNA methyltransferase YP_008723221.1 3314057 D 1355100 CDS YP_008723222.1 556552836 17432051 3314801..3315751 1 NC_022648.1 catalyzes the second step in the glutathione biosynthesis pathway, where it synthesizes ATP + gamma-L-glutamyl-L-cysteine + glycine = ADP + phosphate + glutathione; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione synthetase 3315751 17432051 P423_16165 Escherichia coli JJ1886 glutathione synthetase YP_008723222.1 3314801 D 1355100 CDS YP_008723223.1 556552837 17432052 3315860..3316423 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3316423 17432052 P423_16170 Escherichia coli JJ1886 hypothetical protein YP_008723223.1 3315860 D 1355100 CDS YP_008723224.1 556552838 17432053 3316423..3316839 1 NC_022648.1 similar to RuvC resolvase with substantial differences; NMR structural information suggests this protein is monomeric; unknown cellular function; Derived by automated computational analysis using gene prediction method: Protein Homology.; Holliday junction resolvase 3316839 17432053 P423_16175 Escherichia coli JJ1886 Holliday junction resolvase YP_008723224.1 3316423 D 1355100 CDS YP_008723225.1 556552839 17432054 complement(3316954..3317934) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3317934 17432054 P423_16180 Escherichia coli JJ1886 hypothetical protein YP_008723225.1 3316954 R 1355100 CDS YP_008723226.1 556552840 17432055 3317952..3318656 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3318656 17432055 P423_16185 Escherichia coli JJ1886 hypothetical protein YP_008723226.1 3317952 D 1355100 CDS YP_008723227.1 556552841 17432056 3318674..3319240 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3319240 17432056 P423_16190 Escherichia coli JJ1886 hypothetical protein YP_008723227.1 3318674 D 1355100 CDS YP_008723228.1 556552842 17432057 3319237..3319527 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3319527 17432057 P423_16195 Escherichia coli JJ1886 hypothetical protein YP_008723228.1 3319237 D 1355100 CDS YP_008723229.1 556552843 17432058 3319535..3320128 1 NC_022648.1 HAM1-like protein; Rec-dependent growth; RgdB; yggV; it is suspected that this protein functions to remove misincorporated bases such as xanthine or hypoxanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside-triphosphate diphosphatase 3320128 17432058 P423_16200 Escherichia coli JJ1886 nucleoside-triphosphate diphosphatase YP_008723229.1 3319535 D 1355100 CDS YP_008723230.1 556552844 17432059 3320121..3321257 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; HemN family oxidoreductase 3321257 17432059 P423_16205 Escherichia coli JJ1886 HemN family oxidoreductase YP_008723230.1 3320121 D 1355100 CDS YP_008723231.1 556554772 17432060 3321572..3322558 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter substrate-binding protein 3322558 17432060 P423_16210 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter substrate-binding protein YP_008723231.1 3321572 D 1355100 CDS YP_008723232.1 556554773 17432061 3322603..3323106 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter permease 3323106 17432061 P423_16215 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter permease YP_008723232.1 3322603 D 1355100 CDS YP_008723233.1 556554774 17432062 3323106..3324407 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3324407 17432062 P423_16220 Escherichia coli JJ1886 hypothetical protein YP_008723233.1 3323106 D 1355100 CDS YP_008723234.1 556552845 17432063 complement(3324463..3325470) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3325470 17432063 P423_16225 Escherichia coli JJ1886 hypothetical protein YP_008723234.1 3324463 R 1355100 CDS YP_008723235.1 556552846 17432064 complement(3325587..3326633) 1 NC_022648.1 catalyzes the formation of aspartate from asparagine, periplasmic; regulated by cyclic AMP receptor protein (CRP) and also induced by anaerobiosis; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-asparaginase 3326633 ansB 17432064 ansB Escherichia coli JJ1886 L-asparaginase YP_008723235.1 3325587 R 1355100 CDS YP_008723236.1 556552847 17432065 complement(3326809..3327528) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3327528 17432065 P423_16235 Escherichia coli JJ1886 hypothetical protein YP_008723236.1 3326809 R 1355100 CDS YP_008723237.1 556552848 17432066 complement(3327712..3328038) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3328038 17432066 P423_16240 Escherichia coli JJ1886 hypothetical protein YP_008723237.1 3327712 R 1355100 CDS YP_008723238.1 556552849 17432067 complement(3328038..3328757) 1 NC_022648.1 tRNA (guanine-N(7)-)-methyltransferase; catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA by transferring the methyl residue from S-adenosyl-L-methionine; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (guanine-N(7)-)-methyltransferase 3328757 trmB 17432067 trmB Escherichia coli JJ1886 tRNA (guanine-N(7)-)-methyltransferase YP_008723238.1 3328038 R 1355100 CDS YP_008723239.1 556552850 17432068 3328918..3329970 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine DNA glycosylase 3329970 17432068 P423_16250 Escherichia coli JJ1886 adenine DNA glycosylase YP_008723239.1 3328918 D 1355100 CDS YP_008723240.1 556552851 17432069 3329998..3330273 1 NC_022648.1 protects iron-sulfur proteins against oxidative damage; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidative damage protection protein 3330273 17432069 P423_16255 Escherichia coli JJ1886 oxidative damage protection protein YP_008723240.1 3329998 D 1355100 CDS YP_008723241.1 556552852 17432070 3330338..3331417 1 NC_022648.1 Murein hydrolase C; membrane-bound; lytic; catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid and N-acetylglucosamine residues; Derived by automated computational analysis using gene prediction method: Protein Homology.; murein transglycosylase C 3331417 mltC 17432070 mltC Escherichia coli JJ1886 murein transglycosylase C YP_008723241.1 3330338 D 1355100 CDS YP_008723242.1 556552853 17432071 3331619..3332875 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleoside permease 3332875 17432071 P423_16265 Escherichia coli JJ1886 nucleoside permease YP_008723242.1 3331619 D 1355100 CDS YP_008723243.1 556552854 17432072 complement(3332924..3335059) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine decarboxylase 3335059 17432072 P423_16270 Escherichia coli JJ1886 ornithine decarboxylase YP_008723243.1 3332924 R 1355100 CDS YP_008723244.1 556552855 17432073 3335452..3336159 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3336159 17432073 P423_16275 Escherichia coli JJ1886 membrane protein YP_008723244.1 3335452 D 1355100 CDS YP_008723245.1 556552856 17432075 3336538..3337803 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; integrase 3337803 17432075 P423_16285 Escherichia coli JJ1886 integrase YP_008723245.1 3336538 D 1355100 CDS YP_008723246.1 556554775 17432076 3338059..3339102 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3339102 17432076 P423_16290 Escherichia coli JJ1886 hypothetical protein YP_008723246.1 3338059 D 1355100 CDS YP_008723247.1 556552857 17432077 3339826..3340329 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 3340329 17432077 P423_16295 Escherichia coli JJ1886 insB YP_008723247.1 3339826 D 1355100 CDS YP_008723248.1 556554776 17432078 complement(3340796..3341296) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3341296 17432078 P423_16300 Escherichia coli JJ1886 hypothetical protein YP_008723248.1 3340796 R 1355100 CDS YP_008723249.1 556552858 17432079 complement(3341619..3342122) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 3342122 17432079 P423_16305 Escherichia coli JJ1886 insB YP_008723249.1 3341619 R 1355100 CDS YP_008723250.1 556554777 17433816 complement(3343327..3343434) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Pap(21)B protein 3343434 17433816 P423_16310 Escherichia coli JJ1886 Pap(21)B protein YP_008723250.1 3343327 R 1355100 CDS YP_008723251.1 556554778 17432081 3343839..3344072 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Major pilus subunit operon regulatory protein 3344072 17432081 P423_16315 Escherichia coli JJ1886 Major pilus subunit operon regulatory protein YP_008723251.1 3343839 D 1355100 CDS YP_008723252.1 556552859 17432083 complement(3345523..3345849) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 3345849 17432083 P423_16325 Escherichia coli JJ1886 transposase YP_008723252.1 3345523 R 1355100 CDS YP_008723253.1 556554779 17432084 complement(3346122..3346298) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3346298 17432084 P423_16330 Escherichia coli JJ1886 hypothetical protein YP_008723253.1 3346122 R 1355100 CDS YP_008723254.1 556554780 17432085 complement(3346589..3347335) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3347335 17432085 P423_16335 Escherichia coli JJ1886 transposase YP_008723254.1 3346589 R 1355100 CDS YP_008723255.1 556554781 17432086 3347887..3348147 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3348147 17432086 P423_16340 Escherichia coli JJ1886 hypothetical protein YP_008723255.1 3347887 D 1355100 CDS YP_008723256.1 556554782 17432087 3348189..3348749 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; TetR family transcriptional regulator 3348749 17432087 P423_16345 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008723256.1 3348189 D 1355100 CDS YP_008723257.1 556554783 17432088 3348789..3349217 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 3349217 17432088 P423_16350 Escherichia coli JJ1886 membrane protein YP_008723257.1 3348789 D 1355100 CDS YP_008723258.1 556554784 17432089 complement(3349935..3351128) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MFS transporter 3351128 17432089 P423_16355 Escherichia coli JJ1886 MFS transporter YP_008723258.1 3349935 R 1355100 CDS YP_008723259.1 556554785 17432090 3351264..3352988 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3352988 17432090 P423_16360 Escherichia coli JJ1886 hypothetical protein YP_008723259.1 3351264 D 1355100 CDS YP_008723260.1 556554786 17432091 3352989..3353936 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; N(6)-hydroxylysine O-acetyltransferase 3353936 17432091 P423_16365 Escherichia coli JJ1886 N(6)-hydroxylysine O-acetyltransferase YP_008723260.1 3352989 D 1355100 CDS YP_008723261.1 556554787 17432092 3353936..3355678 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; aerobactin synthase IucC 3355678 17432092 P423_16370 Escherichia coli JJ1886 aerobactin synthase IucC YP_008723261.1 3353936 D 1355100 CDS YP_008723262.1 556554788 17432093 3355675..3356952 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysine 6-monooxygenase 3356952 17432093 P423_16375 Escherichia coli JJ1886 lysine 6-monooxygenase YP_008723262.1 3355675 D 1355100 CDS YP_008723263.1 556554789 17432094 3357034..3359235 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ligand-gated channel protein 3359235 17432094 P423_16380 Escherichia coli JJ1886 ligand-gated channel protein YP_008723263.1 3357034 D 1355100 CDS YP_008723264.1 556554790 17432095 3360890..3364066 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; autotransporter 3364066 17432095 P423_16390 Escherichia coli JJ1886 autotransporter YP_008723264.1 3360890 D 1355100 CDS YP_008723265.1 556554791 17432096 3364113..3364286 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3364286 17432096 P423_16395 Escherichia coli JJ1886 hypothetical protein YP_008723265.1 3364113 D 1355100 CDS YP_008723266.1 556554792 17432097 3364338..3364706 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3364706 17432097 P423_16400 Escherichia coli JJ1886 transposase YP_008723266.1 3364338 D 1355100 CDS YP_008723267.1 556554793 17432098 3364780..3365814 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3365814 17432098 P423_16405 Escherichia coli JJ1886 hypothetical protein YP_008723267.1 3364780 D 1355100 CDS YP_008723268.1 556552860 17432099 3365899..3366717 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 3366717 17432099 P423_16410 Escherichia coli JJ1886 transposase YP_008723268.1 3365899 D 1355100 CDS YP_008723269.1 556554794 17432100 3366729..3367184 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3367184 17432100 P423_16415 Escherichia coli JJ1886 hypothetical protein YP_008723269.1 3366729 D 1355100 CDS YP_008723270.1 556554795 17432101 3367600..3368061 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS3 3368061 17432101 P423_16420 Escherichia coli JJ1886 transposase IS3 YP_008723270.1 3367600 D 1355100 CDS YP_008723271.1 556554796 17432103 complement(3369142..3369345) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lactate permease 3369345 17432103 P423_16430 Escherichia coli JJ1886 lactate permease YP_008723271.1 3369142 R 1355100 CDS YP_008723272.1 556554797 17432104 complement(3370595..3370810) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3370810 17432104 P423_16435 Escherichia coli JJ1886 hypothetical protein YP_008723272.1 3370595 R 1355100 CDS YP_008723273.1 556554798 17432105 complement(3370814..3371173) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3371173 17432105 P423_16440 Escherichia coli JJ1886 hypothetical protein YP_008723273.1 3370814 R 1355100 CDS YP_008723274.1 556554799 17432106 complement(3371464..3371706) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3371706 17432106 P423_16445 Escherichia coli JJ1886 hypothetical protein YP_008723274.1 3371464 R 1355100 CDS YP_008723275.1 556554800 17432107 complement(3372568..3374577) 1 NC_022648.1 IrgA-homologue adhesin (Iha); TonB-dependent; acts as a specific receptor of enterobactin; fur-regulated; urovirulence factor; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ligand-gated channel 3374577 17432107 P423_16450 Escherichia coli JJ1886 ligand-gated channel YP_008723275.1 3372568 R 1355100 CDS YP_008723276.1 556554801 17432108 complement(3375158..3375814) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; integrase 3375814 17432108 P423_16455 Escherichia coli JJ1886 integrase YP_008723276.1 3375158 R 1355100 CDS YP_008723277.1 556554802 17432109 complement(3376021..3376386) 1 NC_022648.1 represses IS2 gene transcription; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS2 3376386 17432109 P423_16460 Escherichia coli JJ1886 transposase IS2 YP_008723277.1 3376021 R 1355100 CDS YP_008723278.1 556552861 17432110 complement(3376538..3377524) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 9-O-acetyl-N-acetylneuraminic acid deacetylase 3377524 17432110 P423_16465 Escherichia coli JJ1886 9-O-acetyl-N-acetylneuraminic acid deacetylase YP_008723278.1 3376538 R 1355100 CDS YP_008723279.1 556552862 17432111 3377624..3378358 1 NC_022648.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3378358 17432111 P423_16470 Escherichia coli JJ1886 transcriptional regulator YP_008723279.1 3377624 D 1355100 CDS YP_008723280.1 556554803 17432112 complement(3378394..3379317) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hydrolase 3379317 17432112 P423_16475 Escherichia coli JJ1886 hydrolase YP_008723280.1 3378394 R 1355100 CDS YP_008723281.1 556552863 17432113 complement(3379379..3380488) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminic acid mutarotase 3380488 17432113 P423_16480 Escherichia coli JJ1886 N-acetylneuraminic acid mutarotase YP_008723281.1 3379379 R 1355100 CDS YP_008723282.1 556552864 17432114 complement(3380501..3381211) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminic acid channel protein 3381211 17432114 P423_16485 Escherichia coli JJ1886 N-acetylneuraminic acid channel protein YP_008723282.1 3380501 R 1355100 CDS YP_008723283.1 556554804 17432115 complement(3381257..3382087) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptidase S9 3382087 17432115 P423_16490 Escherichia coli JJ1886 peptidase S9 YP_008723283.1 3381257 R 1355100 CDS YP_008723284.1 556552865 17432116 complement(3382091..3383563) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sialic acid transporter 3383563 17432116 P423_16495 Escherichia coli JJ1886 sialic acid transporter YP_008723284.1 3382091 R 1355100 CDS YP_008723285.1 556552866 17432117 complement(3383612..3384487) 1 NC_022648.1 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmannosamine kinase 3384487 17432117 P423_16500 Escherichia coli JJ1886 N-acetylmannosamine kinase YP_008723285.1 3383612 R 1355100 CDS YP_008723286.1 556552867 17432118 complement(3384521..3385438) 1 NC_022648.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminate lyase 3385438 17432118 P423_16505 Escherichia coli JJ1886 N-acetylneuraminate lyase YP_008723286.1 3384521 R 1355100 CDS YP_008723287.1 556554805 17432119 3386099..3386524 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3386524 17432119 P423_16510 Escherichia coli JJ1886 transposase YP_008723287.1 3386099 D 1355100 CDS YP_008723288.1 556552868 17432120 3386521..3386871 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 3386871 17432120 P423_16515 Escherichia coli JJ1886 isocitrate lyase YP_008723288.1 3386521 D 1355100 CDS YP_008723289.1 556554806 17432121 3386902..3388002 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS66 3388002 17432121 P423_16520 Escherichia coli JJ1886 transposase IS66 YP_008723289.1 3386902 D 1355100 CDS YP_008723290.1 556552869 17432122 3387999..3389537 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 3389537 17432122 P423_16525 Escherichia coli JJ1886 transposase IS66 YP_008723290.1 3387999 D 1355100 CDS YP_008723291.1 556554807 17432123 complement(3389758..3390141) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3390141 17432123 P423_16530 Escherichia coli JJ1886 hypothetical protein YP_008723291.1 3389758 R 1355100 CDS YP_008723292.1 556552870 17432124 complement(3390308..3390877) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3390877 17432124 P423_16535 Escherichia coli JJ1886 hypothetical protein YP_008723292.1 3390308 R 1355100 CDS YP_008723293.1 556554808 17432125 complement(3391386..3391586) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3391586 17432125 P423_16540 Escherichia coli JJ1886 hypothetical protein YP_008723293.1 3391386 R 1355100 CDS YP_008723294.1 556552871 17432126 complement(3391606..3391746) 1 NC_022648.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 3391746 17432126 P423_16545 Escherichia coli JJ1886 gene expression modulator YP_008723294.1 3391606 R 1355100 CDS YP_008723295.1 556554809 17432127 3392703..3392909 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3392909 17432127 P423_16550 Escherichia coli JJ1886 hypothetical protein YP_008723295.1 3392703 D 1355100 CDS YP_008723296.1 556554810 17432128 3392995..3393567 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3393567 17432128 P423_16555 Escherichia coli JJ1886 hypothetical protein YP_008723296.1 3392995 D 1355100 CDS YP_008723297.1 556552872 17432129 complement(3393688..3395178) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3395178 17432129 P423_16560 Escherichia coli JJ1886 hypothetical protein YP_008723297.1 3393688 R 1355100 CDS YP_008723298.1 556552873 17432130 3396510..3397382 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3397382 17432130 P423_16565 Escherichia coli JJ1886 hypothetical protein YP_008723298.1 3396510 D 1355100 CDS YP_008723299.1 556552874 17432131 3397716..3400838 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3400838 17432131 P423_16570 Escherichia coli JJ1886 hypothetical protein YP_008723299.1 3397716 D 1355100 CDS YP_008723300.1 556554811 17432132 3400987..3402060 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3402060 17432132 P423_16575 Escherichia coli JJ1886 hypothetical protein YP_008723300.1 3400987 D 1355100 CDS YP_008723301.1 556554812 17432133 3402136..3402591 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3402591 17432133 P423_16580 Escherichia coli JJ1886 hypothetical protein YP_008723301.1 3402136 D 1355100 CDS YP_008723302.1 556554813 17432134 3402670..3402903 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3402903 17432134 P423_16585 Escherichia coli JJ1886 hypothetical protein YP_008723302.1 3402670 D 1355100 CDS YP_008723303.1 556552875 17432135 3403004..3403822 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3403822 17432135 P423_16590 Escherichia coli JJ1886 hypothetical protein YP_008723303.1 3403004 D 1355100 CDS YP_008723304.1 556552876 17432136 3403877..3404362 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3404362 17432136 P423_16595 Escherichia coli JJ1886 hypothetical protein YP_008723304.1 3403877 D 1355100 CDS YP_008723305.1 556552877 17432137 3404378..3404854 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3404854 17432137 P423_16600 Escherichia coli JJ1886 hypothetical protein YP_008723305.1 3404378 D 1355100 CDS YP_008723306.1 556552878 17432138 3404917..3405138 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3405138 17432138 P423_16605 Escherichia coli JJ1886 hypothetical protein YP_008723306.1 3404917 D 1355100 CDS YP_008723307.1 556554814 17432139 3405157..3405801 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; antitoxin of the YeeV-YeeU toxin-antitoxin system 3405801 17432139 P423_16610 Escherichia coli JJ1886 antitoxin of the YeeV-YeeU toxin-antitoxin system YP_008723307.1 3405157 D 1355100 CDS YP_008723308.1 556552879 17432140 3405851..3406219 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 3406219 17432140 P423_16615 Escherichia coli JJ1886 antitoxin YP_008723308.1 3405851 D 1355100 CDS YP_008723309.1 556552880 17432141 3406308..3406685 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 3406685 17432141 P423_16620 Escherichia coli JJ1886 toxin YP_008723309.1 3406308 D 1355100 CDS YP_008723310.1 556552881 17432142 3406682..3407170 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3407170 17432142 P423_16625 Escherichia coli JJ1886 hypothetical protein YP_008723310.1 3406682 D 1355100 CDS YP_008723311.1 556552882 17432143 3407187..3407384 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3407384 17432143 P423_16630 Escherichia coli JJ1886 hypothetical protein YP_008723311.1 3407187 D 1355100 CDS YP_008723312.1 556554815 17432144 3407466..3408314 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction methylase 3408314 17432144 P423_16635 Escherichia coli JJ1886 restriction methylase YP_008723312.1 3407466 D 1355100 CDS YP_008723313.1 556554816 17432145 3408383..3408778 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; S-adenosylhomocysteine hydrolase 3408778 17432145 P423_16640 Escherichia coli JJ1886 S-adenosylhomocysteine hydrolase YP_008723313.1 3408383 D 1355100 CDS YP_008723314.1 556554817 17432146 3408771..3409511 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3409511 17432146 P423_16645 Escherichia coli JJ1886 hypothetical protein YP_008723314.1 3408771 D 1355100 CDS YP_008723315.1 556554818 17432147 3410136..3410291 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3410291 17432147 P423_16650 Escherichia coli JJ1886 transposase YP_008723315.1 3410136 D 1355100 CDS YP_008723316.1 556552883 17432148 3411102..3412085 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arabinose 5-phosphate isomerase 3412085 17432148 P423_16655 Escherichia coli JJ1886 arabinose 5-phosphate isomerase YP_008723316.1 3411102 D 1355100 CDS YP_008723317.1 556554819 17432149 3412157..3413305 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; capsule polysaccharide transporter 3413305 17432149 P423_16660 Escherichia coli JJ1886 capsule polysaccharide transporter YP_008723317.1 3412157 D 1355100 CDS YP_008723318.1 556554820 17432150 3413329..3415005 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; polysialic acid transporter 3415005 17432150 P423_16665 Escherichia coli JJ1886 polysialic acid transporter YP_008723318.1 3413329 D 1355100 CDS YP_008723319.1 556552884 17432151 3415015..3415755 1 NC_022648.1 CMP-2-keto-3-deoxyoctulosonic acid synthetase; catalyzes the formation of CMP-3-deoxy-D-manno-octulosonate from CTP and 3-deoxy-D-manno-octulosonate which is incorporated into LPS; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-manno-octulosonate cytidylyltransferase 3415755 17432151 P423_16670 Escherichia coli JJ1886 3-deoxy-manno-octulosonate cytidylyltransferase YP_008723319.1 3415015 D 1355100 CDS YP_008723320.1 556554821 17432152 3415752..3417779 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; capsule polysaccharide transporter 3417779 17432152 P423_16675 Escherichia coli JJ1886 capsule polysaccharide transporter YP_008723320.1 3415752 D 1355100 CDS YP_008723321.1 556554822 17432153 3417877..3419007 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; capsular polysaccharide biosynthesis protein 3419007 17432153 P423_16680 Escherichia coli JJ1886 capsular polysaccharide biosynthesis protein YP_008723321.1 3417877 D 1355100 CDS YP_008723322.1 556554823 17432154 complement(3419552..3420181) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transferase 3420181 17432154 P423_16685 Escherichia coli JJ1886 transferase YP_008723322.1 3419552 R 1355100 CDS YP_008723323.1 556554824 17432155 complement(3420203..3422323) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3422323 17432155 P423_16690 Escherichia coli JJ1886 hypothetical protein YP_008723323.1 3420203 R 1355100 CDS YP_008723324.1 556554825 17432157 complement(3423594..3424262) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter ATP-binding protein 3424262 17432157 P423_16700 Escherichia coli JJ1886 ABC transporter ATP-binding protein YP_008723324.1 3423594 R 1355100 CDS YP_008723325.1 556554826 17432158 complement(3424259..3425035) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; polysialic acid transporter 3425035 17432158 P423_16705 Escherichia coli JJ1886 polysialic acid transporter YP_008723325.1 3424259 R 1355100 CDS YP_008723326.1 556552885 17432159 complement(3426192..3426770) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein 3426770 17432159 P423_16710 Escherichia coli JJ1886 general secretion pathway protein YP_008723326.1 3426192 R 1355100 CDS YP_008723327.1 556554827 17432160 complement(3426772..3427950) 1 NC_022648.1 similar to general secretory pathway protein L; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GspL 3427950 17432160 P423_16715 Escherichia coli JJ1886 GspL YP_008723327.1 3426772 R 1355100 CDS YP_008723328.1 556554828 17432161 complement(3427947..3428924) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II secretion system protein 3428924 17432161 P423_16720 Escherichia coli JJ1886 type II secretion system protein YP_008723328.1 3427947 R 1355100 CDS YP_008723329.1 556554829 17432162 complement(3428921..3429490) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; general secretion pathway protein J 3429490 17432162 P423_16725 Escherichia coli JJ1886 general secretion pathway protein J YP_008723329.1 3428921 R 1355100 CDS YP_008723330.1 556554830 17432163 complement(3429523..3429894) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II secretion system protein 3429894 17432163 P423_16730 Escherichia coli JJ1886 type II secretion system protein YP_008723330.1 3429523 R 1355100 CDS YP_008723331.1 556554831 17432164 complement(3429891..3430454) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; general secretion pathway protein H 3430454 17432164 P423_16735 Escherichia coli JJ1886 general secretion pathway protein H YP_008723331.1 3429891 R 1355100 CDS YP_008723332.1 556552886 17432165 complement(3430458..3430913) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein G 3430913 17432165 P423_16740 Escherichia coli JJ1886 general secretion pathway protein G YP_008723332.1 3430458 R 1355100 CDS YP_008723333.1 556552887 17432166 complement(3430930..3432153) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein F 3432153 17432166 P423_16745 Escherichia coli JJ1886 general secretion pathway protein F YP_008723333.1 3430930 R 1355100 CDS YP_008723334.1 556552888 17432167 complement(3432153..3433646) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3433646 17432167 P423_16750 Escherichia coli JJ1886 hypothetical protein YP_008723334.1 3432153 R 1355100 CDS YP_008723335.1 556552889 17432168 complement(3433646..3435691) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; secretion system protein D 3435691 17432168 P423_16755 Escherichia coli JJ1886 secretion system protein D YP_008723335.1 3433646 R 1355100 CDS YP_008723336.1 556554832 17432169 complement(3435736..3436566) 1 NC_022648.1 part of the general (type II) secretion pathway (GSP), a signal sequence-dependent process responsible for protein export; involved in trans-location of exoproteins from the cytoplasm to the periplasm; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II secretion system protein C 3436566 17432169 P423_16760 Escherichia coli JJ1886 type II secretion system protein C YP_008723336.1 3435736 R 1355100 CDS YP_008723337.1 556552890 17432170 complement(3436713..3437123) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3437123 17432170 P423_16765 Escherichia coli JJ1886 hypothetical protein YP_008723337.1 3436713 R 1355100 CDS YP_008723338.1 556552891 17432171 complement(3437189..3437998) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase A24 3437998 17432171 P423_16770 Escherichia coli JJ1886 peptidase A24 YP_008723338.1 3437189 R 1355100 CDS YP_008723339.1 556554833 17432172 complement(3438128..3442552) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Accessory colonization factor AcfD 3442552 17432172 P423_16775 Escherichia coli JJ1886 Accessory colonization factor AcfD YP_008723339.1 3438128 R 1355100 CDS YP_008723340.1 556552892 17432173 complement(3443169..3444833) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate permease 3444833 17432173 P423_16780 Escherichia coli JJ1886 L-lactate permease YP_008723340.1 3443169 R 1355100 CDS YP_008723341.1 556552893 17432174 complement(3445206..3447377) 1 NC_022648.1 catalyzes the formation of malate from glyoxylate and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate synthase 3447377 17432174 P423_16785 Escherichia coli JJ1886 malate synthase YP_008723341.1 3445206 R 1355100 CDS YP_008723342.1 556552894 17432175 complement(3447399..3447803) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3447803 17432175 P423_16790 Escherichia coli JJ1886 hypothetical protein YP_008723342.1 3447399 R 1355100 CDS YP_008723343.1 556552895 17432176 complement(3447808..3449031) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycolate oxidase 3449031 glcF 17432176 glcF Escherichia coli JJ1886 glycolate oxidase YP_008723343.1 3447808 R 1355100 CDS YP_008723344.1 556552896 17432177 complement(3449042..3450094) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-binding protein 3450094 glcE 17432177 glcE Escherichia coli JJ1886 FAD-binding protein YP_008723344.1 3449042 R 1355100 CDS YP_008723345.1 556552897 17432178 complement(3450094..3451593) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FAD-binding protein 3451593 17432178 P423_16805 Escherichia coli JJ1886 FAD-binding protein YP_008723345.1 3450094 R 1355100 CDS YP_008723346.1 556554834 17432179 complement(3452615..3453757) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-binding protein 3453757 17432179 P423_16810 Escherichia coli JJ1886 DNA-binding protein YP_008723346.1 3452615 R 1355100 CDS YP_008723347.1 556554835 17432180 3454161..3455849 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3455849 17432180 P423_16815 Escherichia coli JJ1886 hypothetical protein YP_008723347.1 3454161 D 1355100 CDS YP_008723348.1 556554836 17432181 3455846..3456760 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3456760 17432181 P423_16820 Escherichia coli JJ1886 hypothetical protein YP_008723348.1 3455846 D 1355100 CDS YP_008723349.1 556554837 17432182 3456813..3457040 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3457040 17432182 P423_16825 Escherichia coli JJ1886 hypothetical protein YP_008723349.1 3456813 D 1355100 CDS YP_008723350.1 556554838 17432183 3457040..3458212 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 8-amino-7-oxononanoate synthase 3458212 17432183 P423_16830 Escherichia coli JJ1886 8-amino-7-oxononanoate synthase YP_008723350.1 3457040 D 1355100 CDS YP_008723351.1 556554839 17432184 complement(3458247..3459326) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; permease 3459326 17432184 P423_16835 Escherichia coli JJ1886 permease YP_008723351.1 3458247 R 1355100 CDS YP_008723352.1 556554840 17432185 complement(3459323..3460393) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; permease 3460393 17432185 P423_16840 Escherichia coli JJ1886 permease YP_008723352.1 3459323 R 1355100 CDS YP_008723353.1 556552898 17432186 complement(3460424..3460984) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3460984 17432186 P423_16845 Escherichia coli JJ1886 hypothetical protein YP_008723353.1 3460424 R 1355100 CDS YP_008723354.1 556554841 17432187 complement(3460996..3461820) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3461820 17432187 P423_16850 Escherichia coli JJ1886 hypothetical protein YP_008723354.1 3460996 R 1355100 CDS YP_008723355.1 556552899 17432188 complement(3461820..3463169) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3463169 17432188 P423_16855 Escherichia coli JJ1886 membrane protein YP_008723355.1 3461820 R 1355100 CDS YP_008723356.1 556552900 17432189 complement(3463215..3463988) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3463988 17432189 P423_16860 Escherichia coli JJ1886 hypothetical protein YP_008723356.1 3463215 R 1355100 CDS YP_008723357.1 556552901 17432190 complement(3464020..3464733) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3464733 17432190 P423_16865 Escherichia coli JJ1886 hypothetical protein YP_008723357.1 3464020 R 1355100 CDS YP_008723358.1 556552902 17432191 3464907..3465599 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-binding protein 3465599 17432191 P423_16870 Escherichia coli JJ1886 ATP-binding protein YP_008723358.1 3464907 D 1355100 CDS YP_008723359.1 556552903 17432192 complement(3465648..3467147) 1 NC_022648.1 involved in the transport of inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter PitA 3467147 17432192 P423_16875 Escherichia coli JJ1886 phosphate transporter PitA YP_008723359.1 3465648 R 1355100 CDS YP_008723360.1 556552904 17432193 complement(3467439..3469298) 1 NC_022648.1 catalyzes the formation of glutathionylspermidine from glutathione and spermidine; also catalyzes the reverse reaction; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase 3469298 17432193 P423_16880 Escherichia coli JJ1886 bifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase YP_008723360.1 3467439 R 1355100 CDS YP_008723361.1 556552905 17432194 3469503..3470369 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GSH-dependent disulfide bond oxidoreductase 3470369 17432194 P423_16885 Escherichia coli JJ1886 GSH-dependent disulfide bond oxidoreductase YP_008723361.1 3469503 D 1355100 CDS YP_008723362.1 556552906 17432195 complement(3470439..3470687) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 accessory protein HypG 3470687 17432195 P423_16890 Escherichia coli JJ1886 hydrogenase 2 accessory protein HypG YP_008723362.1 3470439 R 1355100 CDS YP_008723363.1 556552907 17432196 complement(3470700..3471041) 1 NC_022648.1 plays a role in hydrogenase nickel cofactor insertion; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase nickel incorporation protein 3471041 hypA 17432196 hypA Escherichia coli JJ1886 hydrogenase nickel incorporation protein YP_008723363.1 3470700 R 1355100 CDS YP_008723364.1 556552908 17432197 complement(3471034..3471522) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3471522 17432197 P423_16900 Escherichia coli JJ1886 hydrogenase YP_008723364.1 3471034 R 1355100 CDS YP_008723365.1 556552909 17432198 complement(3471515..3472009) 1 NC_022648.1 protease responsible for the cleavage of a 15 amino acid peptide from the C-terminal end of the large subunit of hydrogenase 2 (HybC); Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 maturation endopeptidase 3472009 hybD 17432198 hybD Escherichia coli JJ1886 hydrogenase 2 maturation endopeptidase YP_008723365.1 3471515 R 1355100 CDS YP_008723366.1 556552910 17432199 complement(3472009..3473712) 1 NC_022648.1 involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 large subunit 3473712 17432199 P423_16910 Escherichia coli JJ1886 hydrogenase 2 large subunit YP_008723366.1 3472009 R 1355100 CDS YP_008723367.1 556552911 17432200 complement(3473709..3474887) 1 NC_022648.1 HybB; cytochrome b subunit of the hydrogenase 2 enzyme, composed of HybA, B, C, and O subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 b cytochrome subunit 3474887 17432200 P423_16915 Escherichia coli JJ1886 hydrogenase 2 b cytochrome subunit YP_008723367.1 3473709 R 1355100 CDS YP_008723368.1 556552912 17432201 complement(3474877..3475863) 1 NC_022648.1 Fe-S ferrodoxin type component; participates in the periplasmic electron-transferring activity of hydrogenase 2; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 3475863 17432201 P423_16920 Escherichia coli JJ1886 hydrogenase YP_008723368.1 3474877 R 1355100 CDS YP_008723369.1 556552913 17432202 complement(3475866..3476984) 1 NC_022648.1 involved in hydrogen uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrogenase 2 small subunit 3476984 17432202 P423_16925 Escherichia coli JJ1886 hydrogenase 2 small subunit YP_008723369.1 3475866 R 1355100 CDS YP_008723370.1 556552914 17432203 complement(3477173..3477460) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3477460 17432203 P423_16930 Escherichia coli JJ1886 hypothetical protein YP_008723370.1 3477173 R 1355100 CDS YP_008723371.1 556552915 17432204 complement(3477579..3478466) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dienelactone hydrolase 3478466 17432204 P423_16935 Escherichia coli JJ1886 dienelactone hydrolase YP_008723371.1 3477579 R 1355100 CDS YP_008723372.1 556552916 17432205 3478623..3479663 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-glyceraldehyde 3-phosphate reductase 3479663 17432205 P423_16940 Escherichia coli JJ1886 L-glyceraldehyde 3-phosphate reductase YP_008723372.1 3478623 D 1355100 CDS YP_008723373.1 556552917 17432206 complement(3479703..3480197) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3480197 17432206 P423_16945 Escherichia coli JJ1886 membrane protein YP_008723373.1 3479703 R 1355100 CDS YP_008723374.1 556552918 17432207 3480385..3481272 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3481272 17432207 P423_16950 Escherichia coli JJ1886 oxidoreductase YP_008723374.1 3480385 D 1355100 CDS YP_008723375.1 556552919 17432208 complement(3481311..3481736) 1 NC_022648.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; biopolymer transporter ExbD 3481736 17432208 P423_16955 Escherichia coli JJ1886 biopolymer transporter ExbD YP_008723375.1 3481311 R 1355100 CDS YP_008723376.1 556552920 17432209 complement(3481743..3482477) 1 NC_022648.1 membrane spanning protein in TonB-ExbB-ExbD complex; involved in the tonB-independent energy-dependent transport iron-siderophore complexes and vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; biopolymer transporter ExbB 3482477 17432209 P423_16960 Escherichia coli JJ1886 biopolymer transporter ExbB YP_008723376.1 3481743 R 1355100 CDS YP_008723377.1 556554842 17432210 complement(3482600..3482686) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3482686 17432210 P423_16965 Escherichia coli JJ1886 hypothetical protein YP_008723377.1 3482600 R 1355100 CDS YP_008723378.1 556552921 17432211 3482729..3483916 1 NC_022648.1 catalyzes the formation of L-homocysteine from cystathionine; Derived by automated computational analysis using gene prediction method: Protein Homology.; cystathionine beta-lyase 3483916 17432211 P423_16970 Escherichia coli JJ1886 cystathionine beta-lyase YP_008723378.1 3482729 D 1355100 CDS YP_008723379.1 556552922 17432212 3484056..3484715 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3484715 17432212 P423_16975 Escherichia coli JJ1886 membrane protein YP_008723379.1 3484056 D 1355100 CDS YP_008723380.1 556552923 17432213 complement(3484755..3485711) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3485711 17432213 P423_16980 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008723380.1 3484755 R 1355100 CDS YP_008723381.1 556552924 17432214 3485848..3487011 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde oxidoreductase 3487011 17432214 P423_16985 Escherichia coli JJ1886 aldehyde oxidoreductase YP_008723381.1 3485848 D 1355100 CDS YP_008723382.1 556552925 17432215 3487116..3487943 1 NC_022648.1 methylglyoxal reductase/beta-keto ester reductase; catalyzes the reduction of 2,5-diketo-D-gluconic acid to 2-keto-L-gulonic acid; also catalyzes the reduction of methylglyoxal, ethyl-2-methylacetoacetate and ethyl-acetoacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,5-diketo-D-gluconic acid reductase 3487943 dkgA 17432215 dkgA Escherichia coli JJ1886 2,5-diketo-D-gluconic acid reductase YP_008723382.1 3487116 D 1355100 CDS YP_008723383.1 556552926 17432216 3488143..3489069 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3489069 17432216 P423_16995 Escherichia coli JJ1886 hypothetical protein YP_008723383.1 3488143 D 1355100 CDS YP_008723384.1 556552927 17432217 3489120..3489377 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3489377 17432217 P423_17000 Escherichia coli JJ1886 membrane protein YP_008723384.1 3489120 D 1355100 CDS YP_008723385.1 556552928 17432218 complement(3489419..3491638) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3491638 17432218 P423_17005 Escherichia coli JJ1886 hypothetical protein YP_008723385.1 3489419 R 1355100 CDS YP_008723386.1 556552929 17432219 3491890..3492639 1 NC_022648.1 regulates the expression of uxuBA; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3492639 17432219 P423_17010 Escherichia coli JJ1886 transcriptional regulator YP_008723386.1 3491890 D 1355100 CDS YP_008723387.1 556552930 17432220 3492962..3494434 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 3494434 17432220 P423_17015 Escherichia coli JJ1886 D-mannonate oxidoreductase YP_008723387.1 3492962 D 1355100 CDS YP_008723388.1 556552931 17432221 3494431..3495447 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate oxidoreductase 3495447 17432221 P423_17020 Escherichia coli JJ1886 galactonate oxidoreductase YP_008723388.1 3494431 D 1355100 CDS YP_008723389.1 556552932 17432222 3495458..3496468 1 NC_022648.1 catalyzes the formation of oxalurate from ureidoglycolate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ureidoglycolate dehydrogenase 3496468 17432222 P423_17025 Escherichia coli JJ1886 ureidoglycolate dehydrogenase YP_008723389.1 3495458 D 1355100 CDS YP_008723390.1 556554843 17432223 3496541..3497524 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter substrate-binding protein 3497524 17432223 P423_17030 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter substrate-binding protein YP_008723390.1 3496541 D 1355100 CDS YP_008723391.1 556554844 17432224 3497566..3498048 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter permease 3498048 17432224 P423_17035 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter permease YP_008723391.1 3497566 D 1355100 CDS YP_008723392.1 556552933 17432225 3498059..3499363 1 NC_022648.1 TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydroascorbate transporter 3499363 17432225 P423_17040 Escherichia coli JJ1886 dehydroascorbate transporter YP_008723392.1 3498059 D 1355100 CDS YP_008723393.1 556552934 17432226 complement(3499434..3500846) 1 NC_022648.1 septal ring component that protects the divisome from stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsI 3500846 17432226 P423_17045 Escherichia coli JJ1886 cell division protein FtsI YP_008723393.1 3499434 R 1355100 CDS YP_008723394.1 556552935 17432227 complement(3500921..3501658) 1 NC_022648.1 catalyzes the formation of 1,2-diacyl-sn-glycerol 3-phosphate from 1-acyl-sn-glycerol 3-phosphate using either acyl-CoA or acyl-ACP; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1-acyl-sn-glycerol-3-phosphate acyltransferase 3501658 17432227 P423_17050 Escherichia coli JJ1886 1-acyl-sn-glycerol-3-phosphate acyltransferase YP_008723394.1 3500921 R 1355100 CDS YP_008723395.1 556552936 17432228 complement(3501893..3504151) 1 NC_022648.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase IV subunit A 3504151 17432228 P423_17055 Escherichia coli JJ1886 DNA topoisomerase IV subunit A YP_008723395.1 3501893 R 1355100 CDS YP_008723396.1 556552937 17432229 complement(3504289..3505896) 1 NC_022648.1 is involved in the transport of the murein peptide L-alanyl-gamma-D-glutamyl-meso-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 3505896 17432229 P423_17060 Escherichia coli JJ1886 peptide ABC transporter substrate-binding protein YP_008723396.1 3504289 R 1355100 CDS YP_008723397.1 556552938 17432230 complement(3506005..3506487) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 3506487 17432230 P423_17065 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008723397.1 3506005 R 1355100 CDS YP_008723398.1 556552939 17432231 complement(3506540..3506932) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3506932 17432231 P423_17070 Escherichia coli JJ1886 hypothetical protein YP_008723398.1 3506540 R 1355100 CDS YP_008723399.1 556552940 17432232 3507084..3507743 1 NC_022648.1 response regulator in two-component regulatory system with QseC; regulates FlhCD which is the master regulator for flagella and motility genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3507743 17432232 P423_17075 Escherichia coli JJ1886 transcriptional regulator YP_008723399.1 3507084 D 1355100 CDS YP_008723400.1 556552941 17432233 3507740..3509089 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein QseC 3509089 17432233 P423_17080 Escherichia coli JJ1886 sensor protein QseC YP_008723400.1 3507740 D 1355100 CDS YP_008723401.1 556552942 17432234 complement(3509135..3509467) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3509467 17432234 P423_17085 Escherichia coli JJ1886 membrane protein YP_008723401.1 3509135 R 1355100 CDS YP_008723402.1 556554845 17432235 complement(3509474..3510184) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3510184 17432235 P423_17090 Escherichia coli JJ1886 hypothetical protein YP_008723402.1 3509474 R 1355100 CDS YP_008723403.1 556552943 17432236 complement(3510187..3510666) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Hcp 3510666 17432236 P423_17095 Escherichia coli JJ1886 Hcp YP_008723403.1 3510187 R 1355100 CDS YP_008723404.1 556552944 17432237 3510917..3511498 1 NC_022648.1 involved in drug resistance; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADPH quinone reductase MdaB 3511498 17432237 P423_17100 Escherichia coli JJ1886 NADPH quinone reductase MdaB YP_008723404.1 3510917 D 1355100 CDS YP_008723405.1 556552945 17432238 3511529..3511843 1 NC_022648.1 catalyzes the oxidation of menadiol to menadione; Derived by automated computational analysis using gene prediction method: Protein Homology.; quinol monooxygenase 3511843 17432238 P423_17105 Escherichia coli JJ1886 quinol monooxygenase YP_008723405.1 3511529 D 1355100 CDS YP_008723406.1 556552946 17432239 complement(3511888..3512775) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RpiR family transcriptional regulator 3512775 17432239 P423_17110 Escherichia coli JJ1886 RpiR family transcriptional regulator YP_008723406.1 3511888 R 1355100 CDS YP_008723407.1 556552947 17432240 complement(3512772..3513719) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit YidC 3513719 17432240 P423_17115 Escherichia coli JJ1886 preprotein translocase subunit YidC YP_008723407.1 3512772 R 1355100 CDS YP_008723408.1 556552948 17432241 complement(3513730..3514779) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron ABC transporter 3514779 17432241 P423_17120 Escherichia coli JJ1886 iron ABC transporter YP_008723408.1 3513730 R 1355100 CDS YP_008723409.1 556552949 17432242 complement(3514776..3515759) 1 NC_022648.1 with FepBCG is involved in the transport of ferric enterobactin; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-enterobactin transporter membrane protein 3515759 17432242 P423_17125 Escherichia coli JJ1886 iron-enterobactin transporter membrane protein YP_008723409.1 3514776 R 1355100 CDS YP_008723410.1 556552950 17432243 complement(3515756..3516565) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter 3516565 17432243 P423_17130 Escherichia coli JJ1886 ABC transporter YP_008723410.1 3515756 R 1355100 CDS YP_008723411.1 556552951 17432244 3516939..3519080 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TonB-dependent receptor 3519080 17432244 P423_17135 Escherichia coli JJ1886 TonB-dependent receptor YP_008723411.1 3516939 D 1355100 CDS YP_008723412.1 556552952 17432245 complement(3519144..3521036) 1 NC_022648.1 decatenates newly replicated chromosomal DNA and relaxes positive and negative DNA supercoiling; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase IV subunit B 3521036 17432245 P423_17140 Escherichia coli JJ1886 DNA topoisomerase IV subunit B YP_008723412.1 3519144 R 1355100 CDS YP_008723413.1 556552953 17432246 complement(3521065..3521646) 1 NC_022648.1 Displays esterase activity toward palmitoyl-CoA and pNP-butyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; esterase 3521646 17432246 P423_17145 Escherichia coli JJ1886 esterase YP_008723413.1 3521065 R 1355100 CDS YP_008723414.1 556552954 17432247 complement(3521646..3522473) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 3',5'-cyclic-nucleotide phosphodiesterase 3522473 17432247 P423_17150 Escherichia coli JJ1886 3',5'-cyclic-nucleotide phosphodiesterase YP_008723414.1 3521646 R 1355100 CDS YP_008723415.1 556552955 17432248 complement(3522498..3522920) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydrogenase 3522920 17432248 P423_17155 Escherichia coli JJ1886 dehydrogenase YP_008723415.1 3522498 R 1355100 CDS YP_008723416.1 556552956 17432249 complement(3522921..3523550) 1 NC_022648.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-ribose pyrophosphatase 3523550 nudF 17432249 nudF Escherichia coli JJ1886 ADP-ribose pyrophosphatase YP_008723416.1 3522921 R 1355100 CDS YP_008723417.1 556552957 17432250 3523755..3525236 1 NC_022648.1 trimeric outer membrane protein involved in efflux of hydrophobic/amphipathic molecules; functions with a number of efflux systems in the inner membrane to transport molecules out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane channel protein 3525236 tolC 17432250 tolC Escherichia coli JJ1886 outer membrane channel protein YP_008723417.1 3523755 D 1355100 CDS YP_008723418.1 556552958 17432251 3525384..3526055 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3526055 17432251 P423_17170 Escherichia coli JJ1886 membrane protein YP_008723418.1 3525384 D 1355100 CDS YP_008723419.1 556552959 17432252 3526061..3527221 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3527221 17432252 P423_17175 Escherichia coli JJ1886 hypothetical protein YP_008723419.1 3526061 D 1355100 CDS YP_008723420.1 556554846 17432253 3527706..3529502 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; arylsulfate sulfotransferase 3529502 17432253 P423_17180 Escherichia coli JJ1886 arylsulfate sulfotransferase YP_008723420.1 3527706 D 1355100 CDS YP_008723421.1 556554847 17432254 3529520..3530188 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; thiol:disulfide interchange protein 3530188 17432254 P423_17185 Escherichia coli JJ1886 thiol:disulfide interchange protein YP_008723421.1 3529520 D 1355100 CDS YP_008723422.1 556554848 17432255 3530203..3530874 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; disulfide oxidoreductase 3530874 17432255 P423_17190 Escherichia coli JJ1886 disulfide oxidoreductase YP_008723422.1 3530203 D 1355100 CDS YP_008723423.1 556552960 17432256 complement(3530920..3531708) 1 NC_022648.1 seems to be involved in biofilm formation; in asymptomatic bacteriuria E. coli strains 83972 and VR50, the ygiD gene is upregulated during biofilm formation in urine; Derived by automated computational analysis using gene prediction method: Protein Homology.; LigB family dioxygenase 3531708 17432256 P423_17195 Escherichia coli JJ1886 LigB family dioxygenase YP_008723423.1 3530920 R 1355100 CDS YP_008723424.1 556552961 17432257 3531851..3532624 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc transporter ZupT 3532624 17432257 P423_17200 Escherichia coli JJ1886 zinc transporter ZupT YP_008723424.1 3531851 D 1355100 CDS YP_008723425.1 556552962 17432258 complement(3532686..3532856) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3532856 17432258 P423_17205 Escherichia coli JJ1886 hypothetical protein YP_008723425.1 3532686 R 1355100 CDS YP_008723426.1 556552963 17432259 3533435..3533998 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein 3533998 17432259 P423_17210 Escherichia coli JJ1886 fimbrial protein YP_008723426.1 3533435 D 1355100 CDS YP_008723427.1 556552964 17432260 3534083..3536605 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3536605 17432260 P423_17215 Escherichia coli JJ1886 membrane protein YP_008723427.1 3534083 D 1355100 CDS YP_008723428.1 556552965 17432261 3536621..3537361 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein StfD 3537361 17432261 P423_17220 Escherichia coli JJ1886 fimbrial protein StfD YP_008723428.1 3536621 D 1355100 CDS YP_008723429.1 556552966 17432262 3537358..3538407 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3538407 17432262 P423_17225 Escherichia coli JJ1886 hypothetical protein YP_008723429.1 3537358 D 1355100 CDS YP_008723430.1 556552967 17432263 complement(3538461..3539114) 1 NC_022648.1 DHBP synthase; functions during riboflavin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3,4-dihydroxy-2-butanone 4-phosphate synthase 3539114 ribB 17432263 ribB Escherichia coli JJ1886 3,4-dihydroxy-2-butanone 4-phosphate synthase YP_008723430.1 3538461 R 1355100 CDS YP_008723431.1 556552968 17432264 3539488..3539787 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3539787 17432264 P423_17235 Escherichia coli JJ1886 hypothetical protein YP_008723431.1 3539488 D 1355100 CDS YP_008723432.1 556552969 17432265 complement(3539822..3540022) 1 NC_022648.1 Involved in glycogen synthesis. May be involved in glycogen priming; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen synthesis protein GlgS 3540022 17432265 P423_17240 Escherichia coli JJ1886 glycogen synthesis protein GlgS YP_008723432.1 3539822 R 1355100 CDS YP_008723433.1 556552970 17432266 3540292..3540921 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3540921 17432266 P423_17245 Escherichia coli JJ1886 membrane protein YP_008723433.1 3540292 D 1355100 CDS YP_008723434.1 556552971 17432267 3540948..3542609 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3542609 17432267 P423_17250 Escherichia coli JJ1886 membrane protein YP_008723434.1 3540948 D 1355100 CDS YP_008723435.1 556552972 17432268 complement(3543028..3544461) 1 NC_022648.1 catalyzes the phosphorylation of D-glycero-D-manno-heptose 7-phosphate to form D,D-heptose-1,7-bisphosphate and catalyzes transfer of ADP to D-glycero-D-manno-heptose 1-phosphate forming ADP-D,D-heptose; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase 3544461 17432268 P423_17255 Escherichia coli JJ1886 bifunctional heptose 7-phosphate kinase/heptose 1-phosphate adenyltransferase YP_008723435.1 3543028 R 1355100 CDS YP_008723436.1 556552973 17432269 complement(3544509..3547349) 1 NC_022648.1 catalyzes the ATP-dependent addition of AMP to a subunit of glutamine synthetase; also catalyzes the reverse reaction - deadenylation; adenylation/deadenylation of glutamine synthetase subunits is important for the regulation of this enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 3547349 17432269 P423_17260 Escherichia coli JJ1886 bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase YP_008723436.1 3544509 R 1355100 CDS YP_008723437.1 556552974 17432270 complement(3547372..3548673) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3548673 17432270 P423_17265 Escherichia coli JJ1886 hypothetical protein YP_008723437.1 3547372 R 1355100 CDS YP_008723438.1 556552975 17432271 3548915..3549535 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3549535 17432271 P423_17270 Escherichia coli JJ1886 hypothetical protein YP_008723438.1 3548915 D 1355100 CDS YP_008723439.1 556552976 17432272 3549599..3550837 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA nucleotidyl transferase 3550837 17432272 P423_17275 Escherichia coli JJ1886 tRNA nucleotidyl transferase YP_008723439.1 3549599 D 1355100 CDS YP_008723440.1 556552977 17432273 complement(3550917..3551738) 1 NC_022648.1 BacA; phosphatase activity in Escherichia coli not kinase; involved in bacitracin resistance as bacitracin supposedly sequesters undecaprenyl disphosphate which reduces the pool of lipid carrier available to the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP pyrophosphate phosphatase 3551738 17432273 P423_17280 Escherichia coli JJ1886 UDP pyrophosphate phosphatase YP_008723440.1 3550917 R 1355100 CDS YP_008723441.1 556552978 17432274 complement(3551829..3552197) 1 NC_022648.1 catalyzes the conversion of 7,8-dihydroneopterin to 6-hydroxymethyl-7,8-dihydropterin and can also catalyze the epimerization of carbon 2' of dihydroneopterin and dihydromonapterin; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroneopterin triphosphate 2'-epimerase 3552197 folB 17432274 folB Escherichia coli JJ1886 dihydroneopterin triphosphate 2'-epimerase YP_008723441.1 3551829 R 1355100 CDS YP_008723442.1 556552979 17432275 3552302..3552919 1 NC_022648.1 involved in acylation of glycerol-3-phosphate to form 1-acyl-glycerol-3 phosphate for use in phospholipid biosynthesis; functions with PlsX; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate acyltransferase 3552919 17432275 P423_17290 Escherichia coli JJ1886 glycerol-3-phosphate acyltransferase YP_008723442.1 3552302 D 1355100 CDS YP_008723443.1 556552980 17432276 complement(3552932..3553912) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcriptional regulator 3553912 17432276 P423_17295 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008723443.1 3552932 R 1355100 CDS YP_008723444.1 556552981 17432277 3554071..3554982 1 NC_022648.1 Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; tartrate dehydratase subunit alpha 3554982 17432277 P423_17300 Escherichia coli JJ1886 tartrate dehydratase subunit alpha YP_008723444.1 3554071 D 1355100 CDS YP_008723445.1 556552982 17432278 3554979..3555584 1 NC_022648.1 Involved in the tartrate degradation pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; L(+)-tartrate dehydratase subunit beta 3555584 17432278 P423_17305 Escherichia coli JJ1886 L(+)-tartrate dehydratase subunit beta YP_008723445.1 3554979 D 1355100 CDS YP_008723446.1 556552983 17432279 3555632..3557095 1 NC_022648.1 involved in the transport of L-tartrate into the cell with the export of succinate out of the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 3557095 17432279 P423_17310 Escherichia coli JJ1886 antiporter YP_008723446.1 3555632 D 1355100 CDS YP_008723447.1 556552984 17432280 complement(3557138..3558151) 1 NC_022648.1 universal genome maintenance protein; Kae1/Qri7/OSGEP/YgjD family protein; in Archaea, some Kae1 are found as fusion proteins similar to two distinct proteins in yeast that are involved in the KEOPS complex; kinase associated endopeptidase 1 (Kae1) and a serine/threonine protein kinase (Bud32); in Pyrococcus Kae1 has atypical AP endonuclease activity and inhibits the kinase activity of Bud32; the protein is essential in Escherichia coli and Bacillus subtilis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UGMP family protein 3558151 17432280 P423_17315 Escherichia coli JJ1886 UGMP family protein YP_008723447.1 3557138 R 1355100 CDS YP_008723448.1 556552985 17432281 3558389..3558604 1 NC_022648.1 a small basic protein that is one of the last in the subunit assembly; omission does not prevent assembly but the subunit is inactive; binds central domain of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S21 3558604 rpsU 17432281 rpsU Escherichia coli JJ1886 30S ribosomal protein S21 YP_008723448.1 3558389 D 1355100 CDS YP_008723449.1 556552986 17432282 3558715..3560460 1 NC_022648.1 synthesizes RNA primers at the replication forks; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA primase 3560460 dnaG 17432282 dnaG Escherichia coli JJ1886 DNA primase YP_008723449.1 3558715 D 1355100 CDS YP_008723450.1 556552987 17432283 3560655..3562496 1 NC_022648.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; this is the primary sigma factor of bacteria; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase sigma factor RpoD 3562496 17432283 P423_17330 Escherichia coli JJ1886 RNA polymerase sigma factor RpoD YP_008723450.1 3560655 D 1355100 CDS YP_008723451.1 556552988 17432284 complement(3562574..3563080) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA glycosylase 3563080 17432284 P423_17335 Escherichia coli JJ1886 DNA glycosylase YP_008723451.1 3562574 R 1355100 CDS YP_008723452.1 556552989 17432286 complement(3563334..3564098) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 3564098 17432286 P423_17345 Escherichia coli JJ1886 FMN reductase YP_008723452.1 3563334 R 1355100 CDS YP_008723453.1 556552990 17432287 3564386..3565009 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3565009 17432287 P423_17350 Escherichia coli JJ1886 transcriptional regulator YP_008723453.1 3564386 D 1355100 CDS YP_008723454.1 556552991 17432288 complement(3565116..3566636) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aerotaxis receptor 3566636 17432288 P423_17355 Escherichia coli JJ1886 aerotaxis receptor YP_008723454.1 3565116 R 1355100 CDS YP_008723455.1 556552992 17432289 3566943..3568433 1 NC_022648.1 catalyzes the formation of 4-aminobutyraldehyde from putrescine and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; putrescine--2-oxoglutarate aminotransferase 3568433 17432289 P423_17360 Escherichia coli JJ1886 putrescine--2-oxoglutarate aminotransferase YP_008723455.1 3566943 D 1355100 CDS YP_008723456.1 556552993 17432290 complement(3568475..3568807) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionyl-tRNA synthetase 3568807 17432290 P423_17365 Escherichia coli JJ1886 methionyl-tRNA synthetase YP_008723456.1 3568475 R 1355100 CDS YP_008723457.1 556552994 17432291 3569026..3570009 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LacI family transcriptional regulator 3570009 17432291 P423_17370 Escherichia coli JJ1886 LacI family transcriptional regulator YP_008723457.1 3569026 D 1355100 CDS YP_008723458.1 556552995 17432292 3570193..3573285 1 NC_022648.1 in Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-galactosidase subunit alpha 3573285 ebgA 17432292 ebgA Escherichia coli JJ1886 beta-D-galactosidase subunit alpha YP_008723458.1 3570193 D 1355100 CDS YP_008723459.1 556552996 17432293 3573282..3573731 1 NC_022648.1 in Escherichia coli this is the second beta-galactosidase system; Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-D-galactosidase subunit beta 3573731 ebgC 17432293 ebgC Escherichia coli JJ1886 beta-D-galactosidase subunit beta YP_008723459.1 3573282 D 1355100 CDS YP_008723460.1 556552997 17432294 3573794..3575227 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid permease 3575227 17432294 P423_17385 Escherichia coli JJ1886 amino acid permease YP_008723460.1 3573794 D 1355100 CDS YP_008723461.1 556554849 17432295 3575361..3576431 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3576431 17432295 P423_17390 Escherichia coli JJ1886 hypothetical protein YP_008723461.1 3575361 D 1355100 CDS YP_008723462.1 556552998 17432296 3576448..3578799 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-glucosidase 3578799 17432296 P423_17395 Escherichia coli JJ1886 alpha-glucosidase YP_008723462.1 3576448 D 1355100 CDS YP_008723463.1 556552999 17432297 3579025..3581043 1 NC_022648.1 catalyzes the formation of trans-2- enoyl-CoA from 2,4-dienoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,4-dienoyl-CoA reductase 3581043 fadH 17432297 fadH Escherichia coli JJ1886 2,4-dienoyl-CoA reductase YP_008723463.1 3579025 D 1355100 CDS YP_008723464.1 556553000 17432298 complement(3581088..3581504) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 3581504 17432298 P423_17405 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008723464.1 3581088 R 1355100 CDS YP_008723465.1 556553001 17432299 complement(3581501..3581815) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mRNA interferase HigB 3581815 17432299 P423_17410 Escherichia coli JJ1886 mRNA interferase HigB YP_008723465.1 3581501 R 1355100 CDS YP_008723466.1 556553002 17432300 complement(3582100..3583236) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 3583236 17432300 P423_17415 Escherichia coli JJ1886 23S rRNA methyltransferase YP_008723466.1 3582100 R 1355100 CDS YP_008723467.1 556553003 17432301 3583321..3583824 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3583824 17432301 P423_17420 Escherichia coli JJ1886 hypothetical protein YP_008723467.1 3583321 D 1355100 CDS YP_008723468.1 556553004 17432302 3583901..3584593 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3584593 17432302 P423_17425 Escherichia coli JJ1886 hypothetical protein YP_008723468.1 3583901 D 1355100 CDS YP_008723469.1 556553005 17432303 3584654..3585658 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3585658 17432303 P423_17430 Escherichia coli JJ1886 oxidoreductase YP_008723469.1 3584654 D 1355100 CDS YP_008723470.1 556553006 17432304 3585941..3586906 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3586906 17432304 P423_17435 Escherichia coli JJ1886 membrane protein YP_008723470.1 3585941 D 1355100 CDS YP_008723471.1 556553007 17432305 3587230..3588474 1 NC_022648.1 involved in the import of serine and threonine coupled with the import of sodium; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine transporter 3588474 17432305 P423_17440 Escherichia coli JJ1886 serine/threonine transporter YP_008723471.1 3587230 D 1355100 CDS YP_008723472.1 556553008 17432306 complement(3588478..3589029) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3589029 17432306 P423_17445 Escherichia coli JJ1886 membrane protein YP_008723472.1 3588478 R 1355100 CDS YP_008723473.1 556553009 17432307 complement(3589112..3590599) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; altronate hydrolase 3590599 17432307 P423_17450 Escherichia coli JJ1886 altronate hydrolase YP_008723473.1 3589112 R 1355100 CDS YP_008723474.1 556553010 17432308 complement(3590614..3592026) 1 NC_022648.1 catalyzes the interconversion of D-glucuronate to D-fructuronate or D-galacturonate to D-tagaturonate; functions in glucuronic and galacturonic metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucuronate isomerase 3592026 17432308 P423_17455 Escherichia coli JJ1886 glucuronate isomerase YP_008723474.1 3590614 R 1355100 CDS YP_008723475.1 556553011 17432309 3592389..3593807 1 NC_022648.1 involved in the transport of aldohexuronates; Derived by automated computational analysis using gene prediction method: Protein Homology.; hexuronate transporter ExuT 3593807 17432309 P423_17460 Escherichia coli JJ1886 hexuronate transporter ExuT YP_008723475.1 3592389 D 1355100 CDS YP_008723476.1 556553012 17432310 3593937..3594713 1 NC_022648.1 regulates the exuT, uxaCA and uxuRAB operons which encode genes involved in hexuronate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 3594713 17432310 P423_17465 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008723476.1 3593937 D 1355100 CDS YP_008723477.1 556553013 17432311 3595058..3595720 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3595720 17432311 P423_17470 Escherichia coli JJ1886 membrane protein YP_008723477.1 3595058 D 1355100 CDS YP_008723478.1 556553014 17432312 3595724..3596107 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3596107 17432312 P423_17475 Escherichia coli JJ1886 membrane protein YP_008723478.1 3595724 D 1355100 CDS YP_008723479.1 556553015 17432313 3596254..3596622 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3596622 17432313 P423_17480 Escherichia coli JJ1886 hypothetical protein YP_008723479.1 3596254 D 1355100 CDS YP_008723480.1 556553016 17432314 3596660..3596965 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3596965 17432314 P423_17485 Escherichia coli JJ1886 membrane protein YP_008723480.1 3596660 D 1355100 CDS YP_008723481.1 556553017 17432315 3596968..3597372 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3597372 17432315 P423_17490 Escherichia coli JJ1886 membrane protein YP_008723481.1 3596968 D 1355100 CDS YP_008723482.1 556553018 17432316 3597362..3597661 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3597661 17432316 P423_17495 Escherichia coli JJ1886 membrane protein YP_008723482.1 3597362 D 1355100 CDS YP_008723483.1 556553019 17432317 3597848..3598240 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3598240 17432317 P423_17500 Escherichia coli JJ1886 membrane protein YP_008723483.1 3597848 D 1355100 CDS YP_008723484.1 556553020 17432318 3598310..3599296 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3599296 17432318 P423_17505 Escherichia coli JJ1886 hypothetical protein YP_008723484.1 3598310 D 1355100 CDS YP_008723485.1 556553021 17432319 3599579..3599947 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3599947 17432319 P423_17510 Escherichia coli JJ1886 membrane protein YP_008723485.1 3599579 D 1355100 CDS YP_008723486.1 556553022 17432320 complement(3599981..3600877) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 3600877 17432320 P423_17515 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008723486.1 3599981 R 1355100 CDS YP_008723487.1 556553023 17432321 3600982..3601683 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pirin 3601683 17432321 P423_17520 Escherichia coli JJ1886 pirin YP_008723487.1 3600982 D 1355100 CDS YP_008723488.1 556553024 17432322 3601706..3601870 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3601870 17432322 P423_17525 Escherichia coli JJ1886 hypothetical protein YP_008723488.1 3601706 D 1355100 CDS YP_008723489.1 556553025 17432323 complement(3601931..3603241) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3603241 17432323 P423_17530 Escherichia coli JJ1886 membrane protein YP_008723489.1 3601931 R 1355100 CDS YP_008723490.1 556553026 17432324 complement(3603269..3604102) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3604102 17432324 P423_17535 Escherichia coli JJ1886 membrane protein YP_008723490.1 3603269 R 1355100 CDS YP_008723491.1 556554850 17432325 3604220..3604522 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3604522 17432325 P423_17540 Escherichia coli JJ1886 transposase YP_008723491.1 3604220 D 1355100 CDS YP_008723492.1 556553027 17432326 3604711..3605367 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 3605367 17432326 P423_17545 Escherichia coli JJ1886 transposase YP_008723492.1 3604711 D 1355100 CDS YP_008723493.1 556554851 17432327 complement(3605395..3605853) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3605853 17432327 P423_17550 Escherichia coli JJ1886 hypothetical protein YP_008723493.1 3605395 R 1355100 CDS YP_008723494.1 556553028 17432328 complement(3606131..3607495) 1 NC_022648.1 catalyzes the formation of pyruvate from serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-serine dehydratase 3607495 17432328 P423_17555 Escherichia coli JJ1886 L-serine dehydratase YP_008723494.1 3606131 R 1355100 CDS YP_008723495.1 556553029 17432329 complement(3607567..3607956) 1 NC_022648.1 has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease L-PSP 3607956 17432329 P423_17560 Escherichia coli JJ1886 endoribonuclease L-PSP YP_008723495.1 3607567 R 1355100 CDS YP_008723496.1 556553030 17432330 complement(3607970..3610264) 1 NC_022648.1 formate acetyltransferase; catalyzes the formation of formate and acetyl-CoA from pyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; keto-acid formate acetyltransferase 3610264 17432330 P423_17565 Escherichia coli JJ1886 keto-acid formate acetyltransferase YP_008723496.1 3607970 R 1355100 CDS YP_008723497.1 556553031 17432331 complement(3610298..3611506) 1 NC_022648.1 catalyzes the formation of propanoyl phosphate from propanoate and ATP; TdcD also has acetate kinase activities and functions in anaerobic threonine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; propionate/acetate kinase 3611506 17432331 P423_17570 Escherichia coli JJ1886 propionate/acetate kinase YP_008723497.1 3610298 R 1355100 CDS YP_008723498.1 556553032 17432332 complement(3611532..3612863) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine transporter 3612863 17432332 P423_17575 Escherichia coli JJ1886 serine/threonine transporter YP_008723498.1 3611532 R 1355100 CDS YP_008723499.1 556553033 17432333 complement(3612885..3613874) 1 NC_022648.1 catalyzes the formation of 2-oxobutanoate from L-threonine; catabolic; Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine dehydratase 3613874 17432333 P423_17580 Escherichia coli JJ1886 threonine dehydratase YP_008723499.1 3612885 R 1355100 CDS YP_008723500.1 556553034 17432334 complement(3613973..3614911) 1 NC_022648.1 regulates the tdcABCDEFG operon which is involved in amino acid degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3614911 17432334 P423_17585 Escherichia coli JJ1886 transcriptional regulator YP_008723500.1 3613973 R 1355100 CDS YP_008723501.1 556554852 17432335 3615100..3615300 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; threonine dehydratase 3615300 17432335 P423_17590 Escherichia coli JJ1886 threonine dehydratase YP_008723501.1 3615100 D 1355100 CDS YP_008723502.1 556553035 17432336 complement(3616419..3617564) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerate kinase 3617564 17432336 P423_17595 Escherichia coli JJ1886 glycerate kinase YP_008723502.1 3616419 R 1355100 CDS YP_008723503.1 556553036 17432337 complement(3617661..3618560) 1 NC_022648.1 catalyzes the reduction of tartronate semialdehyde to glycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; tartronate semialdehyde reductase 3618560 garR 17432337 garR Escherichia coli JJ1886 tartronate semialdehyde reductase YP_008723503.1 3617661 R 1355100 CDS YP_008723504.1 556553037 17432338 complement(3618581..3619351) 1 NC_022648.1 cleaves 5-dehydro-4-deoxy-glucarate and 2-dehydro-3-deoxy-D-glucarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-dehydro-beta-deoxy-D-glucarate aldolase 3619351 17432338 P423_17605 Escherichia coli JJ1886 alpha-dehydro-beta-deoxy-D-glucarate aldolase YP_008723504.1 3618581 R 1355100 CDS YP_008723505.1 556553038 17432339 complement(3619367..3620701) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate transporter 3620701 17432339 P423_17610 Escherichia coli JJ1886 galactonate transporter YP_008723505.1 3619367 R 1355100 CDS YP_008723506.1 556553039 17432340 3621076..3622647 1 NC_022648.1 catalyzes the formation of 5-dehydro-4-deoxy-D-glucarate from D-galactarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; galactarate dehydrogenase 3622647 garD 17432340 garD Escherichia coli JJ1886 galactarate dehydrogenase YP_008723506.1 3621076 D 1355100 CDS YP_008723507.1 556553040 17432341 3622796..3623131 1 NC_022648.1 SohA; PrlF; involved in protein secretion; when overproduced or mutated, it induces growth defect and increased export of a reporter protein; a PrlF mutation induces the activity of the Lon protease, and a Lon-deficient strain suppresses the phenotype conferred by the PrlF mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulator 3623131 17432341 P423_17620 Escherichia coli JJ1886 regulator YP_008723507.1 3622796 D 1355100 CDS YP_008723508.1 556553041 17432342 3623131..3623595 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin YhaV 3623595 17432342 P423_17625 Escherichia coli JJ1886 toxin YhaV YP_008723508.1 3623131 D 1355100 CDS YP_008723509.1 556553042 17432343 complement(3623650..3624459) 1 NC_022648.1 transcriptional repressor for the agaZVWA and agaSYBCDI operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 3624459 17432343 P423_17630 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008723509.1 3623650 R 1355100 CDS YP_008723510.1 556553043 17432344 3624708..3625988 1 NC_022648.1 with KbaY catalyzes the formation of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate from tagatose-1,6-bisphosphate; subunit Z may act as a chaperone for the Y subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 3625988 17432344 P423_17635 Escherichia coli JJ1886 tagatose-bisphosphate aldolase YP_008723510.1 3624708 D 1355100 CDS YP_008723511.1 556553044 17432345 3626011..3626484 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIB 3626484 17432345 P423_17640 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IIB YP_008723511.1 3626011 D 1355100 CDS YP_008723512.1 556553045 17432346 3626495..3627274 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake;involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIC 3627274 17432346 P423_17645 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IIC YP_008723512.1 3626495 D 1355100 CDS YP_008723513.1 556553046 17432347 3627264..3628142 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IID 3628142 17432347 P423_17650 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IID YP_008723513.1 3627264 D 1355100 CDS YP_008723514.1 556553047 17432348 3628160..3628594 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIA 3628594 17432348 P423_17655 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IIA YP_008723514.1 3628160 D 1355100 CDS YP_008723515.1 556554853 17432349 3628591..3629724 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; N-acetylglucosamine-6-phosphate deacetylase 3629724 17432349 P423_17660 Escherichia coli JJ1886 N-acetylglucosamine-6-phosphate deacetylase YP_008723515.1 3628591 D 1355100 CDS YP_008723516.1 556553048 17432350 3630074..3631228 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldose isomerase 3631228 17432350 P423_17665 Escherichia coli JJ1886 aldose isomerase YP_008723516.1 3630074 D 1355100 CDS YP_008723517.1 556553049 17432351 3631241..3632101 1 NC_022648.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 3632101 kbaY 17432351 kbaY Escherichia coli JJ1886 tagatose-bisphosphate aldolase YP_008723517.1 3631241 D 1355100 CDS YP_008723518.1 556553050 17432352 3632268..3632744 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIB 3632744 17432352 P423_17675 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IIB YP_008723518.1 3632268 D 1355100 CDS YP_008723519.1 556553051 17432353 3632783..3633586 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane;protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IIC 3633586 17432353 P423_17680 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IIC YP_008723519.1 3632783 D 1355100 CDS YP_008723520.1 556553052 17432354 3633576..3634367 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IID with IIC forms the translocation channel; involved in N-acetylgalactosamine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS N-acetylgalactosamine transporter subunit IID 3634367 17432354 P423_17685 Escherichia coli JJ1886 PTS N-acetylgalactosamine transporter subunit IID YP_008723520.1 3633576 D 1355100 CDS YP_008723521.1 556553053 17432355 3634368..3635135 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactosamine-6-phosphate isomerase 3635135 17432355 P423_17690 Escherichia coli JJ1886 galactosamine-6-phosphate isomerase YP_008723521.1 3634368 D 1355100 CDS YP_008723522.1 556553054 17432356 complement(3635185..3636048) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3636048 17432356 P423_17695 Escherichia coli JJ1886 16S rRNA methyltransferase YP_008723522.1 3635185 R 1355100 CDS YP_008723523.1 556553055 17432357 3636113..3638149 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein activator LpoA 3638149 17432357 P423_17700 Escherichia coli JJ1886 penicillin-binding protein activator LpoA YP_008723523.1 3636113 D 1355100 CDS YP_008723524.1 556553056 17432358 3638107..3638502 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3638502 17432358 P423_17705 Escherichia coli JJ1886 hypothetical protein YP_008723524.1 3638107 D 1355100 CDS YP_008723525.1 556553057 17432359 3638522..3639112 1 NC_022648.1 Required for the timely initiation of chromosomal replication via direct interactions with the dnaA initiator protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; DnaA initiator-associating protein DiaA 3639112 17432359 P423_17710 Escherichia coli JJ1886 DnaA initiator-associating protein DiaA YP_008723525.1 3638522 D 1355100 CDS YP_008723526.1 556553058 17432360 3639122..3639697 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein 3639697 17432360 P423_17715 Escherichia coli JJ1886 outer membrane lipoprotein YP_008723526.1 3639122 D 1355100 CDS YP_008723527.1 556553059 17432361 complement(3639810..3640850) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3640850 17432361 P423_17720 Escherichia coli JJ1886 membrane protein YP_008723527.1 3639810 R 1355100 CDS YP_008723528.1 556553060 17432362 complement(3640923..3641558) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3641558 17432362 P423_17725 Escherichia coli JJ1886 hypothetical protein YP_008723528.1 3640923 R 1355100 CDS YP_008723529.1 556553061 17432363 3641686..3642204 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general stress protein 3642204 17432363 P423_17730 Escherichia coli JJ1886 general stress protein YP_008723529.1 3641686 D 1355100 CDS YP_008723530.1 556553062 17432364 complement(3642184..3642627) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3642627 17432364 P423_17735 Escherichia coli JJ1886 hypothetical protein YP_008723530.1 3642184 R 1355100 CDS YP_008723531.1 556553063 17432365 3642678..3642980 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GIY-YIG nuclease 3642980 17432365 P423_17740 Escherichia coli JJ1886 GIY-YIG nuclease YP_008723531.1 3642678 D 1355100 CDS YP_008723532.1 556553064 17432366 complement(3642967..3643470) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyltransferase 3643470 17432366 P423_17745 Escherichia coli JJ1886 N-acetyltransferase YP_008723532.1 3642967 R 1355100 CDS YP_008723533.1 556553065 17432367 complement(3643464..3643988) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3643988 17432367 P423_17750 Escherichia coli JJ1886 hypothetical protein YP_008723533.1 3643464 R 1355100 CDS YP_008723534.1 556553066 17432368 3644197..3645192 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 3645192 17432368 P423_17755 Escherichia coli JJ1886 protease YP_008723534.1 3644197 D 1355100 CDS YP_008723535.1 556553067 17432369 3645201..3646079 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protease 3646079 17432369 P423_17760 Escherichia coli JJ1886 protease YP_008723535.1 3645201 D 1355100 CDS YP_008723536.1 556553068 17432370 3646160..3647167 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3647167 17432370 P423_17765 Escherichia coli JJ1886 hypothetical protein YP_008723536.1 3646160 D 1355100 CDS YP_008723537.1 556553069 17432371 complement(3647285..3648529) 1 NC_022648.1 tryptophan transporter of high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan permease 3648529 17432371 P423_17770 Escherichia coli JJ1886 tryptophan permease YP_008723537.1 3647285 R 1355100 CDS YP_008723538.1 556553070 17432372 complement(3648683..3650572) 1 NC_022648.1 participates in the assembly of the large subunit of the ribosome; plays a key role in optimal cell growth at low temperature and is required for normal cell division; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 3650572 17432372 P423_17775 Escherichia coli JJ1886 RNA helicase YP_008723538.1 3648683 R 1355100 CDS YP_008723539.1 556553071 17432373 complement(3650752..3651636) 1 NC_022648.1 lipoprotein that appears to be involved in cell division; interacts with the periplasmic protease Prc and may be activated by protease processing; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoprotein NlpI 3651636 17432373 P423_17780 Escherichia coli JJ1886 lipoprotein NlpI YP_008723539.1 3650752 R 1355100 CDS YP_008723540.1 556553072 17432374 complement(3651745..3653880) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; polynucleotide phosphorylase/polyadenylase 3653880 17432374 P423_17785 Escherichia coli JJ1886 polynucleotide phosphorylase/polyadenylase YP_008723540.1 3651745 R 1355100 CDS YP_008723541.1 556553073 17432375 complement(3654127..3654396) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S15 3654396 17432375 P423_17790 Escherichia coli JJ1886 30S ribosomal protein S15 YP_008723541.1 3654127 R 1355100 CDS YP_008723542.1 556553074 17432376 complement(3654545..3655489) 1 NC_022648.1 catalyzes isomerization of specific uridines in RNA to pseudouridine; responsible for residues in T loops of many tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA pseudouridine synthase B 3655489 truB 17432376 truB Escherichia coli JJ1886 tRNA pseudouridine synthase B YP_008723542.1 3654545 R 1355100 CDS YP_008723543.1 556553075 17432377 complement(3655489..3655890) 1 NC_022648.1 associates with free 30S ribosomal subunits; essential for efficient processing of 16S rRNA; in Escherichia coli rbfA is induced by cold shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-binding factor A 3655890 rbfA 17432377 rbfA Escherichia coli JJ1886 ribosome-binding factor A YP_008723543.1 3655489 R 1355100 CDS YP_008723544.1 556553076 17432378 complement(3656054..3658726) 1 NC_022648.1 Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits during initiation of protein synthesis. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; translation initiation factor IF-2 3658726 infB 17432378 infB Escherichia coli JJ1886 translation initiation factor IF-2 YP_008723544.1 3656054 R 1355100 CDS YP_008723545.1 556553077 17432379 complement(3658751..3660238) 1 NC_022648.1 modifies transcription through interactions with RNA polymerase affecting elongation, readthrough, termination, and antitermination; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M54 3660238 nusA 17432379 nusA Escherichia coli JJ1886 peptidase M54 YP_008723545.1 3658751 R 1355100 CDS YP_008723546.1 556553078 17432380 complement(3660266..3660730) 1 NC_022648.1 required for the maturation of the 30S ribosomal subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome maturation protein RimP 3660730 17432380 P423_17815 Escherichia coli JJ1886 ribosome maturation protein RimP YP_008723546.1 3660266 R 1355100 CDS YP_008723547.1 556553079 17432382 3661349..3662692 1 NC_022648.1 catalyzes the formation of arginosuccinate from citrulline and aspartate in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; argininosuccinate synthase 3662692 17432382 P423_17825 Escherichia coli JJ1886 argininosuccinate synthase YP_008723547.1 3661349 D 1355100 CDS YP_008723548.1 556553080 17432383 complement(3662700..3664325) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate starvation-inducible protein PsiE 3664325 17432383 P423_17830 Escherichia coli JJ1886 phosphate starvation-inducible protein PsiE YP_008723548.1 3662700 R 1355100 CDS YP_008723549.1 556553081 17432385 complement(3664883..3665215) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecG 3665215 secG 17432385 secG Escherichia coli JJ1886 preprotein translocase subunit SecG YP_008723549.1 3664883 R 1355100 CDS YP_008723550.1 556553082 17432386 complement(3665443..3666780) 1 NC_022648.1 catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglucosamine mutase 3666780 glmM 17432386 glmM Escherichia coli JJ1886 phosphoglucosamine mutase YP_008723550.1 3665443 R 1355100 CDS YP_008723551.1 556553083 17432387 complement(3666773..3667621) 1 NC_022648.1 catalyzes the formation of dihydropteroate from 2-amino-4-hydroxy-6-hydroxymethyl-7,8-dihydropteridine diphosphate and 4-aminobenzoate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydropteroate synthase 3667621 folP 17432387 folP Escherichia coli JJ1886 dihydropteroate synthase YP_008723551.1 3666773 R 1355100 CDS YP_008723552.1 556553084 17432388 complement(3667711..3669645) 1 NC_022648.1 inner membrane metalloprotease; may be involved in degradation of aberrant cytoplasmic and membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent metalloprotease 3669645 hflB 17432388 hflB Escherichia coli JJ1886 ATP-dependent metalloprotease YP_008723552.1 3667711 R 1355100 CDS YP_008723553.1 556553085 17432389 complement(3669745..3670374) 1 NC_022648.1 Specifically methylates the uridine in position 2552 of 23S rRNA in the fully assembled 50S ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA methyltransferase 3670374 rrmJ 17432389 rrmJ Escherichia coli JJ1886 23S rRNA methyltransferase YP_008723553.1 3669745 R 1355100 CDS YP_008723554.1 556553086 17432390 3670500..3670793 1 NC_022648.1 RNA binding protein found associated to pre-50S subunit of the ribosome; putative role in ribosome assembly; necessary for optimal growth but not cell viability; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-binding protein YhbY 3670793 17432390 P423_17865 Escherichia coli JJ1886 RNA-binding protein YhbY YP_008723554.1 3670500 D 1355100 CDS YP_008723555.1 556553087 17432391 complement(3670949..3671425) 1 NC_022648.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription elongation factor GreA 3671425 greA 17432391 greA Escherichia coli JJ1886 transcription elongation factor GreA YP_008723555.1 3670949 R 1355100 CDS YP_008723556.1 556553088 17432392 3671673..3673106 1 NC_022648.1 penicillin binding protein 4; penicillin sensitive; catalyzes the formation of D-alanine from D-alanyl-D-alanine; one of four, DD-carboxypeptidase low-molecular weight penicillin-binding proteins that remove terminal D-alanine from pentapeptide side chains; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-alanyl-D-alanine carboxypeptidase 3673106 17432392 P423_17875 Escherichia coli JJ1886 D-alanyl-D-alanine carboxypeptidase YP_008723556.1 3671673 D 1355100 CDS YP_008723557.1 556553089 17432393 complement(3673147..3674319) 1 NC_022648.1 ObgE; essential GTPase; exhibits high exchange rate for GTP/GDP; associates with 50S ribosomal subunit; involved in regulation of chromosomal replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase CgtA 3674319 obgE 17432393 obgE Escherichia coli JJ1886 GTPase CgtA YP_008723557.1 3673147 R 1355100 CDS YP_008723558.1 556553090 17432394 complement(3674335..3675300) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3675300 17432394 P423_17885 Escherichia coli JJ1886 membrane protein YP_008723558.1 3674335 R 1355100 CDS YP_008723559.1 556553091 17432395 complement(3675427..3675684) 1 NC_022648.1 involved in the peptidyltransferase reaction during translation; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L27 3675684 rpmA 17432395 rpmA Escherichia coli JJ1886 50S ribosomal protein L27 YP_008723559.1 3675427 R 1355100 CDS YP_008723560.1 556553092 17432396 complement(3675705..3676016) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L21 3676016 rplU 17432396 rplU Escherichia coli JJ1886 50S ribosomal protein L21 YP_008723560.1 3675705 R 1355100 CDS YP_008723561.1 556553093 17432397 3676275..3677246 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; octaprenyl diphosphate synthase 3677246 17432397 P423_17900 Escherichia coli JJ1886 octaprenyl diphosphate synthase YP_008723561.1 3676275 D 1355100 CDS YP_008723562.1 556553094 17432398 3677479..3677757 1 NC_022648.1 activator of maltose metabolism genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3677757 17432398 P423_17905 Escherichia coli JJ1886 transcriptional regulator YP_008723562.1 3677479 D 1355100 CDS YP_008723563.1 556553095 17432399 complement(3677805..3679064) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylglucosamine 1-carboxyvinyltransferase 3679064 17432399 P423_17910 Escherichia coli JJ1886 UDP-N-acetylglucosamine 1-carboxyvinyltransferase YP_008723563.1 3677805 R 1355100 CDS YP_008723564.1 556553096 17432400 complement(3679119..3679388) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3679388 17432400 P423_17915 Escherichia coli JJ1886 hypothetical protein YP_008723564.1 3679119 R 1355100 CDS YP_008723565.1 556553097 17432401 complement(3679533..3679826) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipid ABC transporter substrate-binding protein 3679826 17432401 P423_17920 Escherichia coli JJ1886 phospholipid ABC transporter substrate-binding protein YP_008723565.1 3679533 R 1355100 CDS YP_008723566.1 556553098 17432402 complement(3679826..3680461) 1 NC_022648.1 involved in maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: Protein Homology.; organic solvent ABC transporter substrate-binding protein 3680461 17432402 P423_17925 Escherichia coli JJ1886 organic solvent ABC transporter substrate-binding protein YP_008723566.1 3679826 R 1355100 CDS YP_008723567.1 556553099 17432403 complement(3680480..3681046) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipid ABC transporter substrate-binding protein 3681046 17432403 P423_17930 Escherichia coli JJ1886 phospholipid ABC transporter substrate-binding protein YP_008723567.1 3680480 R 1355100 CDS YP_008723568.1 556553100 17432404 complement(3681036..3681818) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter permease 3681818 17432404 P423_17935 Escherichia coli JJ1886 ABC transporter permease YP_008723568.1 3681036 R 1355100 CDS YP_008723569.1 556554854 17432405 complement(3681826..3682635) 1 NC_022648.1 ABC transporter maintaining outer membrane lipid asymmetry; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; organic solvent ABC transporter ATP-binding protein 3682635 17432405 P423_17940 Escherichia coli JJ1886 organic solvent ABC transporter ATP-binding protein YP_008723569.1 3681826 R 1355100 CDS YP_008723570.1 556553101 17432406 3682845..3683822 1 NC_022648.1 YrbG; inner membrane protein involved in cell envelope integrity; putative sodium ion/calcium ion exchanger; in E. coli it is non essential for cell viability; member of the YRBG family of cation/Ca2+ exchangers; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 3683822 17432406 P423_17945 Escherichia coli JJ1886 sodium:proton antiporter YP_008723570.1 3682845 D 1355100 CDS YP_008723571.1 556553102 17432407 3683836..3684822 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-arabinose 5-phosphate isomerase 3684822 17432407 P423_17950 Escherichia coli JJ1886 D-arabinose 5-phosphate isomerase YP_008723571.1 3683836 D 1355100 CDS YP_008723572.1 556553103 17432408 3684843..3685409 1 NC_022648.1 forms homotetramers; catalyzes hydrolysis of KDO 8-P to KDO and inorganic phosphate; functions in lipopolysaccharide biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase 3685409 17432408 P423_17955 Escherichia coli JJ1886 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase YP_008723572.1 3684843 D 1355100 CDS YP_008723573.1 556553104 17432409 3685406..3685981 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 3685981 17432409 P423_17960 Escherichia coli JJ1886 sugar ABC transporter substrate-binding protein YP_008723573.1 3685406 D 1355100 CDS YP_008723574.1 556553105 17432410 3685950..3686507 1 NC_022648.1 LptA; periplasmic binding protein part of a putative ABC superfamily of uptake transporters; interacts with LptB protein, the ATP binding component of the uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 3686507 17432410 P423_17965 Escherichia coli JJ1886 sugar ABC transporter substrate-binding protein YP_008723574.1 3685950 D 1355100 CDS YP_008723575.1 556554855 17432411 3686514..3687239 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lipopolysaccharide ABC transporter ATP-binding protein 3687239 17432411 P423_17970 Escherichia coli JJ1886 lipopolysaccharide ABC transporter ATP-binding protein YP_008723575.1 3686514 D 1355100 CDS YP_008723576.1 556553106 17432412 3687287..3688720 1 NC_022648.1 sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released; sigma 54 factor is responsible for the expression of enzymes involved in nitrogen assimilation and metabolism; the rhizobia often have 2 copies of this sigma factor; in Rhizobium etli RpoN1 shown to be involved in the assimilation of several nitrogen and carbon sources during free-living aerobic growth and RpoN2 is involved in symbiotic nitrogen fixation; in Bradyrhizobium both RpoN1 and N2 are functional in free-living and symbiotic conditions, rpoN1 gene was regulated in response to oxygen; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase factor sigma-54 3688720 17432412 P423_17975 Escherichia coli JJ1886 RNA polymerase factor sigma-54 YP_008723576.1 3687287 D 1355100 CDS YP_008723577.1 556553107 17432413 3688743..3689030 1 NC_022648.1 YhbH; resting ribosome-binding protein involved in ribosome stabilization and preservation in stationary phase; binds specifically 100S ribosomes (an inactive ribosome product of a 70S ribosome dimerization); seems to be involved in modulation of the sigma(54) (RpoN) activity for quorum sensing; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome hibernation promoting factor HPF 3689030 17432413 P423_17980 Escherichia coli JJ1886 ribosome hibernation promoting factor HPF YP_008723577.1 3688743 D 1355100 CDS YP_008723578.1 556553108 17432414 3689148..3689639 1 NC_022648.1 involved in nitrogen metabolism; protein IIA is phosphorylated by enzyme I(Ntr); Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter subunit IIA 3689639 17432414 P423_17985 Escherichia coli JJ1886 PTS sugar transporter subunit IIA YP_008723578.1 3689148 D 1355100 CDS YP_008723579.1 556553109 17432415 3689685..3690539 1 NC_022648.1 glucosamine-6-phosphate regulated; inactivates the glmS upregulator glmZ; Derived by automated computational analysis using gene prediction method: Protein Homology.; glmZ(sRNA)-inactivating NTPase 3690539 17432415 P423_17990 Escherichia coli JJ1886 glmZ(sRNA)-inactivating NTPase YP_008723579.1 3689685 D 1355100 CDS YP_008723580.1 556553110 17432416 3690536..3690808 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphohistidinoprotein-hexose phosphotransferase 3690808 17432416 P423_17995 Escherichia coli JJ1886 phosphohistidinoprotein-hexose phosphotransferase YP_008723580.1 3690536 D 1355100 CDS YP_008723581.1 556553111 17432417 3691021..3691653 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3691653 17432417 P423_18000 Escherichia coli JJ1886 hypothetical protein YP_008723581.1 3691021 D 1355100 CDS YP_008723582.1 556553112 17432418 complement(3691650..3692378) 1 NC_022648.1 glycosyltransferase; polymerizes glycan strands in the peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; monofunctional biosynthetic peptidoglycan transglycosylase 3692378 mtgA 17432418 mtgA Escherichia coli JJ1886 monofunctional biosynthetic peptidoglycan transglycosylase YP_008723582.1 3691650 R 1355100 CDS YP_008723583.1 556553113 17432419 complement(3692375..3693028) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isoprenoid biosynthesis protein 3693028 17432419 P423_18010 Escherichia coli JJ1886 isoprenoid biosynthesis protein YP_008723583.1 3692375 R 1355100 CDS YP_008723584.1 556553114 17432420 complement(3693258..3695594) 1 NC_022648.1 sensor-regulator protein which regulates the expression of many genes in response to respiratory growth conditions including anaerobic repression of the arc modulon; hybrid sensory histidine kinase in two-component regulatory system with ArcA; Derived by automated computational analysis using gene prediction method: Protein Homology.; aerobic respiration control sensor protein ArcB 3695594 17432420 P423_18015 Escherichia coli JJ1886 aerobic respiration control sensor protein ArcB YP_008723584.1 3693258 R 1355100 CDS YP_008723585.1 556553115 17432421 complement(3695690..3696652) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3696652 17432421 P423_18020 Escherichia coli JJ1886 hypothetical protein YP_008723585.1 3695690 R 1355100 CDS YP_008723586.1 556554856 17432422 complement(3696665..3696769) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3696769 17432422 P423_18025 Escherichia coli JJ1886 hypothetical protein YP_008723586.1 3696665 R 1355100 CDS YP_008723587.1 556553116 17432423 3697186..3701754 1 NC_022648.1 catalyzes the formation of glutamate from glutamine and alpha-ketoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate synthase subunit alpha 3701754 gltB 17432423 gltB Escherichia coli JJ1886 glutamate synthase subunit alpha YP_008723587.1 3697186 D 1355100 CDS YP_008723588.1 556553117 17432424 3701767..3703185 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate synthase subunit beta 3703185 17432424 P423_18035 Escherichia coli JJ1886 glutamate synthase subunit beta YP_008723588.1 3701767 D 1355100 CDS YP_008723589.1 556553118 17432425 complement(3703253..3703717) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3703717 17432425 P423_18040 Escherichia coli JJ1886 hypothetical protein YP_008723589.1 3703253 R 1355100 CDS YP_008723590.1 556553119 17432426 complement(3703714..3704589) 1 NC_022648.1 catalyzes the phosphorylation of the N-acetylmannosamine (ManNAc) liberated from N-acetyl-neuraminic acid by the nanA protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmannosamine kinase 3704589 17432426 P423_18045 Escherichia coli JJ1886 N-acetylmannosamine kinase YP_008723590.1 3703714 R 1355100 CDS YP_008723591.1 556553120 17432427 complement(3704586..3705275) 1 NC_022648.1 Converts N-acetylmannosamine-6-phosphate to N-acetylglucosamine-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmannosamine-6-phosphate 2-epimerase 3705275 17432427 P423_18050 Escherichia coli JJ1886 N-acetylmannosamine-6-phosphate 2-epimerase YP_008723591.1 3704586 R 1355100 CDS YP_008723592.1 556553121 17432428 complement(3705323..3706813) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sialic acid transporter 3706813 17432428 P423_18055 Escherichia coli JJ1886 sialic acid transporter YP_008723592.1 3705323 R 1355100 CDS YP_008723593.1 556553122 17432429 complement(3706922..3707815) 1 NC_022648.1 catalyzes the formation of pyruvate and N-acetylmannosamine from N-acetylneuraminic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminate lyase 3707815 17432429 P423_18060 Escherichia coli JJ1886 N-acetylneuraminate lyase YP_008723593.1 3706922 R 1355100 CDS YP_008723594.1 556553123 17432430 complement(3707937..3708728) 1 NC_022648.1 Transcriptional repressor of the nan operon that encodes proteins involved in sialic acid utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3708728 17432430 P423_18065 Escherichia coli JJ1886 transcriptional regulator YP_008723594.1 3707937 R 1355100 CDS YP_008723595.1 556553124 17432431 complement(3708836..3709333) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase 3709333 17432431 P423_18070 Escherichia coli JJ1886 peptidase YP_008723595.1 3708836 R 1355100 CDS YP_008723596.1 556553125 17432432 complement(3709339..3709977) 1 NC_022648.1 transcriptional activator; required for activation of bacteriophage P1 late promoter; induced by starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.; stringent starvation protein A 3709977 sspA 17432432 sspA Escherichia coli JJ1886 stringent starvation protein A YP_008723596.1 3709339 R 1355100 CDS YP_008723597.1 556553126 17432433 complement(3710372..3710764) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S9 3710764 17432433 P423_18080 Escherichia coli JJ1886 30S ribosomal protein S9 YP_008723597.1 3710372 R 1355100 CDS YP_008723598.1 556553127 17432434 complement(3710780..3711208) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L13 3711208 17432434 P423_18085 Escherichia coli JJ1886 50S ribosomal protein L13 YP_008723598.1 3710780 R 1355100 CDS YP_008723599.1 556553128 17432435 complement(3711428..3712555) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3712555 17432435 P423_18090 Escherichia coli JJ1886 hypothetical protein YP_008723599.1 3711428 R 1355100 CDS YP_008723600.1 556553129 17432436 3712749..3713147 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3713147 17432436 P423_18095 Escherichia coli JJ1886 hypothetical protein YP_008723600.1 3712749 D 1355100 CDS YP_008723601.1 556553130 17432437 3713301..3714668 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine endoprotease DegQ 3714668 17432437 P423_18100 Escherichia coli JJ1886 serine endoprotease DegQ YP_008723601.1 3713301 D 1355100 CDS YP_008723602.1 556553131 17432438 3714758..3715825 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; serine endoprotease 3715825 17432438 P423_18105 Escherichia coli JJ1886 serine endoprotease YP_008723602.1 3714758 D 1355100 CDS YP_008723603.1 556553132 17432439 complement(3715888..3716826) 1 NC_022648.1 oxidizes malate to oxaloacetate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate dehydrogenase 3716826 17432439 P423_18110 Escherichia coli JJ1886 malate dehydrogenase YP_008723603.1 3715888 R 1355100 CDS YP_008723604.1 556553133 17432440 3717261..3717731 1 NC_022648.1 regulates arginine biosynthesis when complexed with arginine by binding at site that overlap the promotors of the arginine biosynthesis genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine repressor 3717731 17432440 P423_18115 Escherichia coli JJ1886 arginine repressor YP_008723604.1 3717261 D 1355100 CDS YP_008723605.1 556553134 17432441 3718095..3718358 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3718358 17432441 P423_18120 Escherichia coli JJ1886 membrane protein YP_008723605.1 3718095 D 1355100 CDS YP_008723606.1 556553135 17432442 complement(3718413..3718685) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3718685 17432442 P423_18125 Escherichia coli JJ1886 hypothetical protein YP_008723606.1 3718413 R 1355100 CDS YP_008723607.1 556553136 17432443 complement(3718777..3720744) 1 NC_022648.1 with AaeA forms an efflux pump whose substrates are p-hydroxybenzoic acid 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxybenzoic acid transporter 3720744 17432443 P423_18130 Escherichia coli JJ1886 hydroxybenzoic acid transporter YP_008723607.1 3718777 R 1355100 CDS YP_008723608.1 556553137 17432444 complement(3720750..3721682) 1 NC_022648.1 with AaeB forms an efflux pump whose substrates are p-hydroxybenzoic acid, 6-hydroxy-2-naphthoic and 2-hydroxycinnamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; hydroxybenzoic acid transporter 3721682 17432444 P423_18135 Escherichia coli JJ1886 hydroxybenzoic acid transporter YP_008723608.1 3720750 R 1355100 CDS YP_008723609.1 556553138 17432445 complement(3721690..3721962) 1 NC_022648.1 membrane protein AaeX; the gene is a member of the aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transfer flavoprotein FixA 3721962 17432445 P423_18140 Escherichia coli JJ1886 electron transfer flavoprotein FixA YP_008723609.1 3721690 R 1355100 CDS YP_008723610.1 556553139 17432446 3722076..3723005 1 NC_022648.1 for aaeXAB operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3723005 17432446 P423_18145 Escherichia coli JJ1886 transcriptional regulator YP_008723610.1 3722076 D 1355100 CDS YP_008723611.1 556553140 17432447 complement(3723127..3724572) 1 NC_022648.1 responsible for the proteolytic maturation of the E. coli pMccB17 plasmid-encoded microcin B17, an exported protein that targets the essential topoisomerase II DNA gyrase; degrades the E. coli plasmid F-encoded CcdA; Derived by automated computational analysis using gene prediction method: Protein Homology.; protease TldD 3724572 tldD 17432447 tldD Escherichia coli JJ1886 protease TldD YP_008723611.1 3723127 R 1355100 CDS YP_008723612.1 556553141 17432448 complement(3724728..3728528) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3728528 17432448 P423_18155 Escherichia coli JJ1886 membrane protein YP_008723612.1 3724728 R 1355100 CDS YP_008723613.1 556553142 17432449 complement(3728596..3730065) 1 NC_022648.1 involved in the processing of the 5'end of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease G 3730065 17432449 P423_18160 Escherichia coli JJ1886 ribonuclease G YP_008723613.1 3728596 R 1355100 CDS YP_008723614.1 556553143 17432450 complement(3730055..3730648) 1 NC_022648.1 Maf; overexpression in Bacillus subtilis inhibits septation in the dividing cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; Maf 3730648 17432450 P423_18165 Escherichia coli JJ1886 Maf YP_008723614.1 3730055 R 1355100 CDS YP_008723615.1 556553144 17432451 complement(3730657..3731145) 1 NC_022648.1 part of cell wall structural complex MreBCD; transmembrane component; Derived by automated computational analysis using gene prediction method: Protein Homology.; rod shape-determining protein MreD 3731145 17432451 P423_18170 Escherichia coli JJ1886 rod shape-determining protein MreD YP_008723615.1 3730657 R 1355100 CDS YP_008723616.1 556553145 17432452 complement(3731145..3732248) 1 NC_022648.1 in some organisms this protein is a transmembrane protein while in others it is periplasmic; involved in some organisms with other components of the MreBCD complex and with penicillin binding proteins in the periplasm or cell wall; Derived by automated computational analysis using gene prediction method: Protein Homology.; rod shape-determining protein MreC 3732248 17432452 P423_18175 Escherichia coli JJ1886 rod shape-determining protein MreC YP_008723616.1 3731145 R 1355100 CDS YP_008723617.1 556553146 17432453 complement(3732314..3733357) 1 NC_022648.1 functions in MreBCD complex in some organisms; Derived by automated computational analysis using gene prediction method: Protein Homology.; rod shape-determining protein Mbl 3733357 17432453 P423_18180 Escherichia coli JJ1886 rod shape-determining protein Mbl YP_008723617.1 3732314 R 1355100 CDS YP_008723618.1 556553147 17432454 complement(3733662..3735602) 1 NC_022648.1 regulates the degradation of the small RNAs CsrB and CsrC; may function to targate RNase E to specific RNA molecules; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 3735602 17432454 P423_18185 Escherichia coli JJ1886 regulatory protein YP_008723618.1 3733662 R 1355100 CDS YP_008723619.1 556553148 17432455 3735754..3736728 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quinone oxidoreductase 3736728 17432455 P423_18190 Escherichia coli JJ1886 quinone oxidoreductase YP_008723619.1 3735754 D 1355100 CDS YP_008723620.1 556554857 17432456 3736765..3736929 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; initiation of DNA replication 3736929 17432456 P423_18195 Escherichia coli JJ1886 initiation of DNA replication YP_008723620.1 3736765 D 1355100 CDS YP_008723621.1 556553149 17432458 3737705..3738175 1 NC_022648.1 composes the biotin carboxyl carrier protein subunit of the acetyl-CoA carboxylase complex, the enzyme that catalyzes the carboxylation of acetyl-CoA to malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase biotin carboxyl carrier protein 3738175 17432458 P423_18205 Escherichia coli JJ1886 acetyl-CoA carboxylase biotin carboxyl carrier protein YP_008723621.1 3737705 D 1355100 CDS YP_008723622.1 556553150 17432459 3738186..3739535 1 NC_022648.1 an AccC homodimer forms the biotin carboxylase subunit of the acetyl CoA carboxylase, an enzyme that catalyzes the formation of malonyl-CoA, which in turn controls the rate of fatty acid metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA carboxylase biotin carboxylase subunit 3739535 17432459 P423_18210 Escherichia coli JJ1886 acetyl-CoA carboxylase biotin carboxylase subunit YP_008723622.1 3738186 D 1355100 CDS YP_008723623.1 556554858 17432460 complement(3739627..3740673) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3740673 17432460 P423_18215 Escherichia coli JJ1886 hypothetical protein YP_008723623.1 3739627 R 1355100 CDS YP_008723624.1 556554859 17432461 complement(3740670..3741632) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar kinase 3741632 17432461 P423_18220 Escherichia coli JJ1886 sugar kinase YP_008723624.1 3740670 R 1355100 CDS YP_008723625.1 556553151 17432462 complement(3741654..3742643) 1 NC_022648.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose ABC transporter permease 3742643 rbsC 17432462 rbsC Escherichia coli JJ1886 ribose ABC transporter permease YP_008723625.1 3741654 R 1355100 CDS YP_008723626.1 556553152 17432463 complement(3742644..3744143) 1 NC_022648.1 with XylFH is part of the high affinity xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter ATP-binding protein 3744143 17432463 P423_18230 Escherichia coli JJ1886 xylose ABC transporter ATP-binding protein YP_008723626.1 3742644 R 1355100 CDS YP_008723627.1 556554860 17432464 complement(3744204..3745094) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter 3745094 17432464 P423_18235 Escherichia coli JJ1886 sugar ABC transporter YP_008723627.1 3744204 R 1355100 CDS YP_008723628.1 556553153 17432465 complement(3745130..3745984) 1 NC_022648.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 3745984 gatY 17432465 gatY Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008723628.1 3745130 R 1355100 CDS YP_008723629.1 556554861 17432466 3746325..3747155 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DeoR faimly transcriptional regulator 3747155 17432466 P423_18245 Escherichia coli JJ1886 DeoR faimly transcriptional regulator YP_008723629.1 3746325 D 1355100 CDS YP_008723630.1 556554862 17432467 3747187..3748122 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar kinase 3748122 17432467 P423_18250 Escherichia coli JJ1886 sugar kinase YP_008723630.1 3747187 D 1355100 CDS YP_008723631.1 556553154 17432468 3748215..3748457 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3748457 17432468 P423_18255 Escherichia coli JJ1886 membrane protein YP_008723631.1 3748215 D 1355100 CDS YP_008723632.1 556553155 17432469 3748447..3749898 1 NC_022648.1 mediates high affinitiy panthothenate transport which is stimulated by the presence of sodium ions; member of SSS family of sodium/solute symporters; the imported panthothenate is phosphorylated by panthothenate kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:pantothenate symporter 3749898 panF 17432469 panF Escherichia coli JJ1886 sodium:pantothenate symporter YP_008723632.1 3748447 D 1355100 CDS YP_008723633.1 556553156 17432470 3749910..3750791 1 NC_022648.1 methylates ribosomal protein L11 at multiple amino acid positions; mutations of these genes in Escherichia coli or Thermus thermophilus has no apparent phenotype; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosomal protein L11 methyltransferase 3750791 prmA 17432470 prmA Escherichia coli JJ1886 ribosomal protein L11 methyltransferase YP_008723633.1 3749910 D 1355100 CDS YP_008723634.1 556553157 17432471 3751120..3752085 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA-dihydrouridine synthase B 3752085 17432471 P423_18270 Escherichia coli JJ1886 tRNA-dihydrouridine synthase B YP_008723634.1 3751120 D 1355100 CDS YP_008723635.1 556553158 17432472 3752111..3752407 1 NC_022648.1 Stimulates excision of phage lambda; affects Mu development; acts as an activator of rRNA and iRNA transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fis family transcriptional regulator 3752407 fis 17432472 fis Escherichia coli JJ1886 Fis family transcriptional regulator YP_008723635.1 3752111 D 1355100 CDS YP_008723636.1 556553159 17432473 3752492..3753376 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 3753376 17432473 P423_18280 Escherichia coli JJ1886 methyltransferase YP_008723636.1 3752492 D 1355100 CDS YP_008723637.1 556553160 17432474 3753460..3753639 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3753639 17432474 P423_18285 Escherichia coli JJ1886 hypothetical protein YP_008723637.1 3753460 D 1355100 CDS YP_008723638.1 556553161 17432475 complement(3753642..3754304) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3754304 17432475 P423_18290 Escherichia coli JJ1886 transcriptional regulator YP_008723638.1 3753642 R 1355100 CDS YP_008723639.1 556553162 17432476 3754703..3755860 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acriflavine resistance protein E 3755860 17432476 P423_18295 Escherichia coli JJ1886 acriflavine resistance protein E YP_008723639.1 3754703 D 1355100 CDS YP_008723640.1 556553163 17432477 3755872..3758976 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 3758976 17432477 P423_18300 Escherichia coli JJ1886 multidrug transporter YP_008723640.1 3755872 D 1355100 CDS YP_008723641.1 556553164 17432478 3759229..3759450 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3759450 17432478 P423_18305 Escherichia coli JJ1886 membrane protein YP_008723641.1 3759229 D 1355100 CDS YP_008723642.1 556553165 17432479 3759881..3760906 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 3760906 17432479 P423_18310 Escherichia coli JJ1886 amino acid ABC transporter substrate-binding protein YP_008723642.1 3759881 D 1355100 CDS YP_008723643.1 556553166 17432480 3760974..3762155 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 3762155 17432480 P423_18315 Escherichia coli JJ1886 amino acid ABC transporter permease YP_008723643.1 3760974 D 1355100 CDS YP_008723644.1 556553167 17432481 3762165..3763268 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 3763268 17432481 P423_18320 Escherichia coli JJ1886 amino acid ABC transporter permease YP_008723644.1 3762165 D 1355100 CDS YP_008723645.1 556553168 17432482 3763276..3764034 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter ATP-binding protein 3764034 17432482 P423_18325 Escherichia coli JJ1886 amino acid ABC transporter ATP-binding protein YP_008723645.1 3763276 D 1355100 CDS YP_008723646.1 556553169 17432490 3769922..3770476 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3770476 17432490 P423_18365 Escherichia coli JJ1886 hypothetical protein YP_008723646.1 3769922 D 1355100 CDS YP_008723647.1 556553170 17432491 complement(3770452..3770709) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3770709 17432491 P423_18370 Escherichia coli JJ1886 hypothetical protein YP_008723647.1 3770452 R 1355100 CDS YP_008723648.1 556553171 17432492 complement(3770706..3771524) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate 5-dehydrogenase 3771524 17432492 P423_18375 Escherichia coli JJ1886 shikimate 5-dehydrogenase YP_008723648.1 3770706 R 1355100 CDS YP_008723649.1 556553172 17432493 complement(3771529..3772101) 1 NC_022648.1 involved in the biosynthesis of the threonylcarbamoyladenosine (t6A) residue at position 37 of ANN-decoding tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein 3772101 17432493 P423_18380 Escherichia coli JJ1886 tRNA(ANN) t(6)A37 threonylcarbamoyladenosine modification protein YP_008723649.1 3771529 R 1355100 CDS YP_008723650.1 556553173 17432494 complement(3772106..3772648) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3772648 17432494 P423_18385 Escherichia coli JJ1886 hypothetical protein YP_008723650.1 3772106 R 1355100 CDS YP_008723651.1 556553174 17432495 complement(3772677..3773150) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3773150 17432495 P423_18390 Escherichia coli JJ1886 hypothetical protein YP_008723651.1 3772677 R 1355100 CDS YP_008723652.1 556553175 17432496 complement(3773122..3774246) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3774246 17432496 P423_18395 Escherichia coli JJ1886 hypothetical protein YP_008723652.1 3773122 R 1355100 CDS YP_008723653.1 556553176 17432497 3774376..3774885 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide deformylase 3774885 17432497 P423_18400 Escherichia coli JJ1886 peptide deformylase YP_008723653.1 3774376 D 1355100 CDS YP_008723654.1 556553177 17432498 3774900..3775847 1 NC_022648.1 modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet) which is important in translation initiation; inactivation of this gene in Escherichia coli severely impairs growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionyl-tRNA formyltransferase 3775847 fmt 17432498 fmt Escherichia coli JJ1886 methionyl-tRNA formyltransferase YP_008723654.1 3774900 D 1355100 CDS YP_008723655.1 556553178 17432499 3775899..3777188 1 NC_022648.1 catalyzes the methylation of cytosine at position 967 (m5C967) of 16S rRNA; SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3777188 17432499 P423_18410 Escherichia coli JJ1886 16S rRNA methyltransferase YP_008723655.1 3775899 D 1355100 CDS YP_008723656.1 556553179 17432500 3777210..3778586 1 NC_022648.1 involved in potassium uptake; found to be peripherally associated with the inner membrane in Escherichia coli; contains an NAD-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter peripheral membrane protein 3778586 trkA 17432500 trkA Escherichia coli JJ1886 potassium transporter peripheral membrane protein YP_008723656.1 3777210 D 1355100 CDS YP_008723657.1 556553180 17432501 3778716..3779129 1 NC_022648.1 forms homopentamer; channel that opens in response to pressure or hypoosmotic shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; large-conductance mechanosensitive channel 3779129 mscL 17432501 mscL Escherichia coli JJ1886 large-conductance mechanosensitive channel YP_008723657.1 3778716 D 1355100 CDS YP_008723658.1 556553181 17432502 complement(3779126..3779344) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Alternative ribosome-rescue factor A 3779344 17432502 P423_18425 Escherichia coli JJ1886 Alternative ribosome-rescue factor A YP_008723658.1 3779126 R 1355100 CDS YP_008723659.1 556553182 17432503 complement(3779400..3779825) 1 NC_022648.1 mediates expression of the zinc export protein ZntA in response to high levels of zinc; member of MerR family of transcriptional regulators; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc-responsive transcriptional regulator 3779825 zntR 17432503 zntR Escherichia coli JJ1886 zinc-responsive transcriptional regulator YP_008723659.1 3779400 R 1355100 CDS YP_008723660.1 556553183 17432504 complement(3779836..3780204) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3780204 17432504 P423_18435 Escherichia coli JJ1886 hypothetical protein YP_008723660.1 3779836 R 1355100 CDS YP_008723661.1 556553184 17432505 complement(3780311..3780694) 1 NC_022648.1 is a component of the macrolide binding site in the peptidyl transferase center; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L17 3780694 rplQ 17432505 rplQ Escherichia coli JJ1886 50S ribosomal protein L17 YP_008723661.1 3780311 R 1355100 CDS YP_008723662.1 556553185 17432506 complement(3780735..3781724) 1 NC_022648.1 catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Dimerization of the alpha subunit is the first step in the sequential assembly of subunits to form the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit alpha 3781724 17432506 P423_18445 Escherichia coli JJ1886 DNA-directed RNA polymerase subunit alpha YP_008723662.1 3780735 R 1355100 CDS YP_008723663.1 556553186 17432507 complement(3781750..3782370) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S4 3782370 17432507 P423_18450 Escherichia coli JJ1886 30S ribosomal protein S4 YP_008723663.1 3781750 R 1355100 CDS YP_008723664.1 556553187 17432508 complement(3782404..3782793) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S11 3782793 17432508 P423_18455 Escherichia coli JJ1886 30S ribosomal protein S11 YP_008723664.1 3782404 R 1355100 CDS YP_008723665.1 556553188 17432509 complement(3782810..3783166) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S13 3783166 17432509 P423_18460 Escherichia coli JJ1886 30S ribosomal protein S13 YP_008723665.1 3782810 R 1355100 CDS YP_008723666.1 556553189 17432510 complement(3783313..3783429) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L36 3783429 17432510 P423_18465 Escherichia coli JJ1886 50S ribosomal protein L36 YP_008723666.1 3783313 R 1355100 CDS YP_008723667.1 556553190 17432511 complement(3783461..3784792) 1 NC_022648.1 forms heterotrimeric complex in the membrane; in bacteria the complex consists of SecY which forms the channel pore and SecE and SecG; the SecG subunit is not essential; in bacteria translocation is driven via the SecA ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecY 3784792 secY 17432511 secY Escherichia coli JJ1886 preprotein translocase subunit SecY YP_008723667.1 3783461 R 1355100 CDS YP_008723668.1 556553191 17432512 complement(3784800..3785234) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L15 3785234 17432512 P423_18475 Escherichia coli JJ1886 50S ribosomal protein L15 YP_008723668.1 3784800 R 1355100 CDS YP_008723669.1 556553192 17432513 complement(3785238..3785417) 1 NC_022648.1 L30 binds domain II of the 23S rRNA and the 5S rRNA; similar to eukaryotic protein L7; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L30 3785417 rpmD 17432513 rpmD Escherichia coli JJ1886 50S ribosomal protein L30 YP_008723669.1 3785238 R 1355100 CDS YP_008723670.1 556553193 17432514 complement(3785421..3785924) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S5 3785924 17432514 P423_18485 Escherichia coli JJ1886 30S ribosomal protein S5 YP_008723670.1 3785421 R 1355100 CDS YP_008723671.1 556553194 17432515 complement(3785939..3786292) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L18 3786292 17432515 P423_18490 Escherichia coli JJ1886 50S ribosomal protein L18 YP_008723671.1 3785939 R 1355100 CDS YP_008723672.1 556553195 17432516 complement(3786302..3786835) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L6 3786835 17432516 P423_18495 Escherichia coli JJ1886 50S ribosomal protein L6 YP_008723672.1 3786302 R 1355100 CDS YP_008723673.1 556553196 17432517 complement(3786848..3787240) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S8 3787240 17432517 P423_18500 Escherichia coli JJ1886 30S ribosomal protein S8 YP_008723673.1 3786848 R 1355100 CDS YP_008723674.1 556553197 17432518 complement(3787274..3787579) 1 NC_022648.1 located in the peptidyl transferase center and involved in assembly of 30S ribosome subunit; similar to what is observed with proteins L31 and L33, some proteins in this family contain CXXC motifs that are involved in zinc binding; if two copies are present in a genome, then the duplicated copy appears to have lost the zinc-binding motif and is instead regulated by zinc; the proteins in this group do not appear to have the zinc-binding motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S14 3787579 rpsN 17432518 rpsN Escherichia coli JJ1886 30S ribosomal protein S14 YP_008723674.1 3787274 R 1355100 CDS YP_008723675.1 556553198 17432519 complement(3787594..3788133) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L5 3788133 17432519 P423_18510 Escherichia coli JJ1886 50S ribosomal protein L5 YP_008723675.1 3787594 R 1355100 CDS YP_008723676.1 556553199 17432520 complement(3788148..3788462) 1 NC_022648.1 assembly initiator protein; binds to 5' end of 23S rRNA and nucleates assembly of the 50S; surrounds polypeptide exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L24 3788462 rplX 17432520 rplX Escherichia coli JJ1886 50S ribosomal protein L24 YP_008723676.1 3788148 R 1355100 CDS YP_008723677.1 556553200 17432521 complement(3788473..3788844) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L14 3788844 17432521 P423_18520 Escherichia coli JJ1886 50S ribosomal protein L14 YP_008723677.1 3788473 R 1355100 CDS YP_008723678.1 556553201 17432522 complement(3789009..3789263) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S17 3789263 17432522 P423_18525 Escherichia coli JJ1886 30S ribosomal protein S17 YP_008723678.1 3789009 R 1355100 CDS YP_008723679.1 556553202 17432523 complement(3789263..3789454) 1 NC_022648.1 one of the stabilizing components for the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L29 3789454 17432523 P423_18530 Escherichia coli JJ1886 50S ribosomal protein L29 YP_008723679.1 3789263 R 1355100 CDS YP_008723680.1 556553203 17432524 complement(3789454..3789864) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L16 3789864 17432524 P423_18535 Escherichia coli JJ1886 50S ribosomal protein L16 YP_008723680.1 3789454 R 1355100 CDS YP_008723681.1 556553204 17432525 complement(3789877..3790578) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S3 3790578 17432525 P423_18540 Escherichia coli JJ1886 30S ribosomal protein S3 YP_008723681.1 3789877 R 1355100 CDS YP_008723682.1 556553205 17432526 complement(3790596..3790928) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L22 3790928 17432526 P423_18545 Escherichia coli JJ1886 50S ribosomal protein L22 YP_008723682.1 3790596 R 1355100 CDS YP_008723683.1 556553206 17432527 complement(3790943..3791221) 1 NC_022648.1 protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S19 3791221 rpsS 17432527 rpsS Escherichia coli JJ1886 30S ribosomal protein S19 YP_008723683.1 3790943 R 1355100 CDS YP_008723684.1 556553207 17432528 complement(3791238..3792059) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L2 3792059 17432528 P423_18555 Escherichia coli JJ1886 50S ribosomal protein L2 YP_008723684.1 3791238 R 1355100 CDS YP_008723685.1 556553208 17432529 complement(3792077..3792379) 1 NC_022648.1 binds third domain of 23S rRNA and protein L29; part of exit tunnel; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L23 3792379 rplW 17432529 rplW Escherichia coli JJ1886 50S ribosomal protein L23 YP_008723685.1 3792077 R 1355100 CDS YP_008723686.1 556553209 17432530 complement(3792376..3792981) 1 NC_022648.1 L4 is important during the early stages of 50S assembly; it initially binds near the 5' end of the 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L4 3792981 rplD 17432530 rplD Escherichia coli JJ1886 50S ribosomal protein L4 YP_008723686.1 3792376 R 1355100 CDS YP_008723687.1 556553210 17432531 complement(3792992..3793621) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L3 3793621 17432531 P423_18570 Escherichia coli JJ1886 50S ribosomal protein L3 YP_008723687.1 3792992 R 1355100 CDS YP_008723688.1 556553211 17432532 complement(3793654..3793965) 1 NC_022648.1 NusE; involved in assembly of the 30S subunit; in the ribosome, this protein is involved in the binding of tRNA; in Escherichia coli this protein was also found to be involved in transcription antitermination; NusB/S10 heterodimers bind boxA sequences in the leader RNA of rrn operons which is required for antitermination; binding of NusB/S10 to boxA nucleates assembly of the antitermination complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S10 3793965 rpsJ 17432532 rpsJ Escherichia coli JJ1886 30S ribosomal protein S10 YP_008723688.1 3793654 R 1355100 CDS YP_008723689.1 556553212 17432533 complement(3794203..3794622) 1 NC_022648.1 involved in type II protein secretion; Derived by automated computational analysis using gene prediction method: Protein Homology.; protein secretion protein GspB 3794622 17432533 P423_18580 Escherichia coli JJ1886 protein secretion protein GspB YP_008723689.1 3794203 R 1355100 CDS YP_008723690.1 556553213 17432534 complement(3794624..3796093) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein A 3796093 17432534 P423_18585 Escherichia coli JJ1886 general secretion pathway protein A YP_008723690.1 3794624 R 1355100 CDS YP_008723691.1 556553214 17432535 3796273..3797088 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pilus assembly protein PilZ 3797088 17432535 P423_18590 Escherichia coli JJ1886 pilus assembly protein PilZ YP_008723691.1 3796273 D 1355100 CDS YP_008723692.1 556553215 17432536 3797060..3799024 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; secretion system protein D 3799024 17432536 P423_18595 Escherichia coli JJ1886 secretion system protein D YP_008723692.1 3797060 D 1355100 CDS YP_008723693.1 556553216 17432537 3799034..3800515 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3800515 17432537 P423_18600 Escherichia coli JJ1886 hypothetical protein YP_008723693.1 3799034 D 1355100 CDS YP_008723694.1 556553217 17432538 3800512..3801708 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein F 3801708 17432538 P423_18605 Escherichia coli JJ1886 general secretion pathway protein F YP_008723694.1 3800512 D 1355100 CDS YP_008723695.1 556553218 17432539 3801718..3802155 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein G 3802155 17432539 P423_18610 Escherichia coli JJ1886 general secretion pathway protein G YP_008723695.1 3801718 D 1355100 CDS YP_008723696.1 556553219 17432540 3802163..3802672 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein H 3802672 17432540 P423_18615 Escherichia coli JJ1886 general secretion pathway protein H YP_008723696.1 3802163 D 1355100 CDS YP_008723697.1 556553220 17432541 3802669..3803046 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type II secretion system protein I 3803046 17432541 P423_18620 Escherichia coli JJ1886 type II secretion system protein I YP_008723697.1 3802669 D 1355100 CDS YP_008723698.1 556553221 17432542 3803039..3803626 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type II secretion system protein J 3803626 17432542 P423_18625 Escherichia coli JJ1886 type II secretion system protein J YP_008723698.1 3803039 D 1355100 CDS YP_008723699.1 556553222 17432543 3803619..3804602 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type II secretion system protein K 3804602 17432543 P423_18630 Escherichia coli JJ1886 type II secretion system protein K YP_008723699.1 3803619 D 1355100 CDS YP_008723700.1 556553223 17432544 3804617..3805780 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type II secretion system protein L 3805780 17432544 P423_18635 Escherichia coli JJ1886 type II secretion system protein L YP_008723700.1 3804617 D 1355100 CDS YP_008723701.1 556553224 17432545 3805777..3806238 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; general secretion pathway protein M 3806238 17432545 P423_18640 Escherichia coli JJ1886 general secretion pathway protein M YP_008723701.1 3805777 D 1355100 CDS YP_008723702.1 556553225 17432547 complement(3806939..3807415) 1 NC_022648.1 iron storage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; bacterioferritin 3807415 17432547 P423_18650 Escherichia coli JJ1886 bacterioferritin YP_008723702.1 3806939 R 1355100 CDS YP_008723703.1 556553226 17432548 complement(3807487..3807681) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bacterioferritin-associated ferredoxin 3807681 17432548 P423_18655 Escherichia coli JJ1886 bacterioferritin-associated ferredoxin YP_008723703.1 3807487 R 1355100 CDS YP_008723704.1 556554863 17432549 complement(3807850..3810552) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysozyme 3810552 17432549 P423_18660 Escherichia coli JJ1886 lysozyme YP_008723704.1 3807850 R 1355100 CDS YP_008723705.1 556554864 17432550 complement(3810844..3812028) 1 NC_022648.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; elongation factor Tu 3812028 tuf 17432550 tuf Escherichia coli JJ1886 elongation factor Tu YP_008723705.1 3810844 R 1355100 CDS YP_008723706.1 556553227 17432551 complement(3812099..3814213) 1 NC_022648.1 EF-G; promotes GTP-dependent translocation of the ribosome during translation; many organisms have multiple copies of this gene; Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor G 3814213 fusA 17432551 fusA Escherichia coli JJ1886 elongation factor G YP_008723706.1 3812099 R 1355100 CDS YP_008723707.1 556553228 17432552 complement(3814310..3814780) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S7 3814780 17432552 P423_18675 Escherichia coli JJ1886 30S ribosomal protein S7 YP_008723707.1 3814310 R 1355100 CDS YP_008723708.1 556553229 17432553 complement(3814877..3815251) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S12 3815251 17432553 P423_18680 Escherichia coli JJ1886 30S ribosomal protein S12 YP_008723708.1 3814877 R 1355100 CDS YP_008723709.1 556553230 17432554 complement(3815377..3815664) 1 NC_022648.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur transfer complex subunit TusB 3815664 17432554 P423_18685 Escherichia coli JJ1886 sulfur transfer complex subunit TusB YP_008723709.1 3815377 R 1355100 CDS YP_008723710.1 556553231 17432555 complement(3815671..3816030) 1 NC_022648.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur transfer that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur relay protein TusC 3816030 17432555 P423_18690 Escherichia coli JJ1886 sulfur relay protein TusC YP_008723710.1 3815671 R 1355100 CDS YP_008723711.1 556553232 17432556 complement(3816030..3816416) 1 NC_022648.1 in Escherichai coli the heterohexameric TusBCD complex is involved in sulfur related that results in thiouridation to U34 position in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur transfer complex subunit TusD 3816416 17432556 P423_18695 Escherichia coli JJ1886 sulfur transfer complex subunit TusD YP_008723711.1 3816030 R 1355100 CDS YP_008723712.1 556553233 17432557 complement(3816416..3817138) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3817138 17432557 P423_18700 Escherichia coli JJ1886 hypothetical protein YP_008723712.1 3816416 R 1355100 CDS YP_008723713.1 556553234 17432558 complement(3817305..3818117) 1 NC_022648.1 rotamase; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 3818117 17432558 P423_18705 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008723713.1 3817305 R 1355100 CDS YP_008723714.1 556553235 17432559 3818338..3818556 1 NC_022648.1 required for phi X174 lysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysis protein 3818556 17432559 P423_18710 Escherichia coli JJ1886 lysis protein YP_008723714.1 3818338 D 1355100 CDS YP_008723715.1 556553236 17432560 complement(3818605..3819195) 1 NC_022648.1 rotamase; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 3819195 17432560 P423_18715 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008723715.1 3818605 R 1355100 CDS YP_008723716.1 556553237 17432561 complement(3819290..3819490) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3819490 17432561 P423_18720 Escherichia coli JJ1886 hypothetical protein YP_008723716.1 3819290 R 1355100 CDS YP_008723717.1 556553238 17432562 complement(3819500..3821305) 1 NC_022648.1 involved in potassium efflux; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 3821305 17432562 P423_18725 Escherichia coli JJ1886 potassium transporter YP_008723717.1 3819500 R 1355100 CDS YP_008723718.1 556553239 17432563 complement(3821305..3821859) 1 NC_022648.1 required for KefB activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 3821859 17432563 P423_18730 Escherichia coli JJ1886 potassium transporter YP_008723718.1 3821305 R 1355100 CDS YP_008723719.1 556553240 17432564 3821987..3823900 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione ABC transporter ATP-binding protein 3823900 17432564 P423_18735 Escherichia coli JJ1886 glutathione ABC transporter ATP-binding protein YP_008723719.1 3821987 D 1355100 CDS YP_008723720.1 556553241 17432565 3823900..3824922 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 3824922 17432565 P423_18740 Escherichia coli JJ1886 hydrolase YP_008723720.1 3823900 D 1355100 CDS YP_008723721.1 556553242 17432566 3824916..3825134 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3825134 17432566 P423_18745 Escherichia coli JJ1886 hypothetical protein YP_008723721.1 3824916 D 1355100 CDS YP_008723722.1 556553243 17432567 3825188..3826057 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribulokinase 3826057 17432567 P423_18750 Escherichia coli JJ1886 phosphoribulokinase YP_008723722.1 3825188 D 1355100 CDS YP_008723723.1 556553244 17432568 complement(3826112..3826516) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3826516 17432568 P423_18755 Escherichia coli JJ1886 hypothetical protein YP_008723723.1 3826112 R 1355100 CDS YP_008723724.1 556553245 17432569 3826818..3827450 1 NC_022648.1 cAMP receptor protein; complexes with cyclic AMP and binds to specific DNA sites near the promoter to regulate the transcription of several catabolite-sensitive operons; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3827450 17432569 P423_18760 Escherichia coli JJ1886 transcriptional regulator YP_008723724.1 3826818 D 1355100 CDS YP_008723725.1 556553246 17432570 3827501..3829591 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3829591 17432570 P423_18765 Escherichia coli JJ1886 membrane protein YP_008723725.1 3827501 D 1355100 CDS YP_008723726.1 556553247 17432571 complement(3829658..3830878) 1 NC_022648.1 DapATase; bifunctional enzyme that functions in arginine and lysine biosynthetic pathways; catalyzes the formation of N-acetyl-L-glutamate 5-semialdehyde from 2-oxoglutarate and N(2)-acetyl-L-ornithine or N-succinyl-2-L-amino-6-oxoheptanedioate from 2-oxoglutarate and N-succinyl-L-2,6-diaminoheptanedioate; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyldiaminopimelate aminotransferase 3830878 argD 17432571 argD Escherichia coli JJ1886 succinyldiaminopimelate aminotransferase YP_008723726.1 3829658 R 1355100 CDS YP_008723727.1 556553248 17432572 complement(3830964..3831527) 1 NC_022648.1 TrpG; with TrpE catalyzes the formation of anthranilate and glutamate from chorismate and glutamine; TrpG provides the glutamine amidotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; anthranilate synthase subunit II 3831527 17432572 P423_18775 Escherichia coli JJ1886 anthranilate synthase subunit II YP_008723727.1 3830964 R 1355100 CDS YP_008723728.1 556553249 17432573 complement(3831559..3832161) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell filamentation protein Fic 3832161 17432573 P423_18780 Escherichia coli JJ1886 cell filamentation protein Fic YP_008723728.1 3831559 R 1355100 CDS YP_008723729.1 556553250 17432574 complement(3832151..3832318) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3832318 17432574 P423_18785 Escherichia coli JJ1886 hypothetical protein YP_008723729.1 3832151 R 1355100 CDS YP_008723730.1 556553251 17432575 complement(3832423..3832995) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 3832995 17432575 P423_18790 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008723730.1 3832423 R 1355100 CDS YP_008723731.1 556553252 17432576 3833266..3834447 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 3834447 17432576 P423_18795 Escherichia coli JJ1886 transporter YP_008723731.1 3833266 D 1355100 CDS YP_008723732.1 556553253 17432577 3834709..3837252 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite reductase subunit NirD 3837252 17432577 P423_18800 Escherichia coli JJ1886 nitrite reductase subunit NirD YP_008723732.1 3834709 D 1355100 CDS YP_008723733.1 556553254 17432578 3837249..3837575 1 NC_022648.1 involved in reducing nitrite to ammonium to detoxify nitrite accumulation in anaerobic nitrate-respiring cells and regenerate NAD+; bounds to NirB, the cytoplasmic subunit, whose expression is induced at high nitrate concentrations; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite reductase small subunit 3837575 nirD 17432578 nirD Escherichia coli JJ1886 nitrite reductase small subunit YP_008723733.1 3837249 D 1355100 CDS YP_008723734.1 556553255 17432579 3837702..3838508 1 NC_022648.1 member of the FNT family of formate and nitrite transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite transporter NirC 3838508 17432579 P423_18810 Escherichia coli JJ1886 nitrite transporter NirC YP_008723734.1 3837702 D 1355100 CDS YP_008723735.1 556553256 17432580 3838527..3839900 1 NC_022648.1 multifunction enzyme consisting of uroporphyrin-III C-methyltransferase, precorrin-2 dehydrogenase and sirohydrochlorin ferrochelatase; catalyzes the methylation of uroporphyrinogen III to form precorrin-2, then catalyzes formation of sirohydrochlorin from precorrin-2 and finally catalyzed the formation of siroheme from sirohydrochlorin; Derived by automated computational analysis using gene prediction method: Protein Homology.; siroheme synthase 3839900 cysG 17432580 cysG Escherichia coli JJ1886 siroheme synthase YP_008723735.1 3838527 D 1355100 CDS YP_008723736.1 556553257 17432581 3840152..3840319 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3840319 17432581 P423_18820 Escherichia coli JJ1886 membrane protein YP_008723736.1 3840152 D 1355100 CDS YP_008723737.1 556553258 17432582 complement(3840427..3841512) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3841512 17432582 P423_18825 Escherichia coli JJ1886 hypothetical protein YP_008723737.1 3840427 R 1355100 CDS YP_008723738.1 556553259 17432583 complement(3841524..3842828) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3842828 17432583 P423_18830 Escherichia coli JJ1886 membrane protein YP_008723738.1 3841524 R 1355100 CDS YP_008723739.1 556553260 17432584 complement(3842840..3843193) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3843193 17432584 P423_18835 Escherichia coli JJ1886 membrane protein YP_008723739.1 3842840 R 1355100 CDS YP_008723740.1 556553261 17432585 complement(3843204..3844082) 1 NC_022648.1 phosphotriesterase homology protein; PhP; YhfV; member of a family of proteins related to phosphotriesterase (PTE); Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 3844082 17432585 P423_18840 Escherichia coli JJ1886 hydrolase YP_008723740.1 3843204 R 1355100 CDS YP_008723741.1 556553262 17432586 complement(3844079..3845305) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mutase 3845305 17432586 P423_18845 Escherichia coli JJ1886 mutase YP_008723741.1 3844079 R 1355100 CDS YP_008723742.1 556553263 17432587 complement(3845306..3846469) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3846469 17432587 P423_18850 Escherichia coli JJ1886 hypothetical protein YP_008723742.1 3845306 R 1355100 CDS YP_008723743.1 556553264 17432588 complement(3846553..3846915) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3846915 17432588 P423_18855 Escherichia coli JJ1886 hypothetical protein YP_008723743.1 3846553 R 1355100 CDS YP_008723744.1 556553265 17432589 complement(3846932..3847837) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3847837 17432589 P423_18860 Escherichia coli JJ1886 hypothetical protein YP_008723744.1 3846932 R 1355100 CDS YP_008723745.1 556553266 17432590 complement(3847999..3849003) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophanyl-tRNA synthetase 3849003 17432590 P423_18865 Escherichia coli JJ1886 tryptophanyl-tRNA synthetase YP_008723745.1 3847999 R 1355100 CDS YP_008723746.1 556553267 17432591 complement(3848996..3849754) 1 NC_022648.1 catalyzes the dephosphorylation of 2-phosphoglycolate to form glycolate and phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycolate phosphatase 3849754 17432591 P423_18870 Escherichia coli JJ1886 phosphoglycolate phosphatase YP_008723746.1 3848996 R 1355100 CDS YP_008723747.1 556553268 17432592 complement(3849747..3850424) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribulose-phosphate 3-epimerase 3850424 17432592 P423_18875 Escherichia coli JJ1886 ribulose-phosphate 3-epimerase YP_008723747.1 3849747 R 1355100 CDS YP_008723748.1 556553269 17432593 complement(3850442..3851278) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA adenine methylase 3851278 17432593 P423_18880 Escherichia coli JJ1886 DNA adenine methylase YP_008723748.1 3850442 R 1355100 CDS YP_008723749.1 556553270 17432594 complement(3851385..3852671) 1 NC_022648.1 binds the septal ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein DamX 3852671 17432594 P423_18885 Escherichia coli JJ1886 cell division protein DamX YP_008723749.1 3851385 R 1355100 CDS YP_008723750.1 556553271 17432595 complement(3852763..3853851) 1 NC_022648.1 catalyzes the formation of 3-dehydroquinate from 3-deoxy-arabino-heptulonate 7-phosphate; functions in aromatic amino acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-dehydroquinate synthase 3853851 aroB 17432595 aroB Escherichia coli JJ1886 3-dehydroquinate synthase YP_008723750.1 3852763 R 1355100 CDS YP_008723751.1 556554865 17432596 complement(3853908..3854585) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; shikimate kinase 3854585 17432596 P423_18895 Escherichia coli JJ1886 shikimate kinase YP_008723751.1 3853908 R 1355100 CDS YP_008723752.1 556553272 17432597 complement(3854830..3856068) 1 NC_022648.1 outer membrane porin probably involved in uptake of extracellular double-stranded DNA; similar to outer membrane competence protein ComE from Haemophilus influenzae and outer membrane protein PilQ involved in type IV pilus production from Pseudomonas aeruginosa; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane porin HofQ 3856068 hofQ 17432597 hofQ Escherichia coli JJ1886 outer membrane porin HofQ YP_008723752.1 3854830 R 1355100 CDS YP_008723753.1 556554866 17432598 complement(3855980..3856384) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA utilization protein HofP 3856384 17432598 P423_18905 Escherichia coli JJ1886 DNA utilization protein HofP YP_008723753.1 3855980 R 1355100 CDS YP_008723754.1 556553273 17432599 complement(3856374..3856814) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein HofO 3856814 17432599 P423_18910 Escherichia coli JJ1886 DNA utilization protein HofO YP_008723754.1 3856374 R 1355100 CDS YP_008723755.1 556553274 17432600 complement(3856798..3857337) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein HofN 3857337 17432600 P423_18915 Escherichia coli JJ1886 DNA utilization protein HofN YP_008723755.1 3856798 R 1355100 CDS YP_008723756.1 556553275 17432601 complement(3857337..3858116) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein HofM 3858116 17432601 P423_18920 Escherichia coli JJ1886 DNA utilization protein HofM YP_008723756.1 3857337 R 1355100 CDS YP_008723757.1 556553276 17432602 3858236..3860788 1 NC_022648.1 bifunctional murein transglycosylase/murein transpeptidase; penicillin-binding protein 1A; involved in the synthesis of cross-linked peptidoglycan from the lipid intermediates in cell wall formation; penicillin-insensitive transglycosylase catalyzes the formation of linear glycan strands and the penicillin-sensitive transpeptidase catalyzes the cross-linking of the peptide subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; penicillin-binding protein 1a 3860788 mrcA 17432602 mrcA Escherichia coli JJ1886 penicillin-binding protein 1a YP_008723757.1 3858236 D 1355100 CDS YP_008723758.1 556553277 17432603 complement(3860814..3860894) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3860894 17432603 P423_18930 Escherichia coli JJ1886 hypothetical protein YP_008723758.1 3860814 R 1355100 CDS YP_008723759.1 556553278 17432604 complement(3860954..3861514) 1 NC_022648.1 ADP-sugar pyrophosphatase; catalyzes the formation of D-ribose 5-phosphate from ADP-ribose; can also act on ADP-mannose and ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenosine nucleotide hydrolase 3861514 nudE 17432604 nudE Escherichia coli JJ1886 adenosine nucleotide hydrolase YP_008723759.1 3860954 R 1355100 CDS YP_008723760.1 556553279 17432605 3861834..3863969 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Intracellular growth attenuator protein igaA 3863969 17432605 P423_18940 Escherichia coli JJ1886 Intracellular growth attenuator protein igaA YP_008723760.1 3861834 D 1355100 CDS YP_008723761.1 556553280 17432606 3864034..3864702 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nucleotidase 3864702 17432606 P423_18945 Escherichia coli JJ1886 nucleotidase YP_008723761.1 3864034 D 1355100 CDS YP_008723762.1 556553281 17432607 3864713..3865114 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribosome-associated heat shock protein Hsp15 3865114 17432607 P423_18950 Escherichia coli JJ1886 ribosome-associated heat shock protein Hsp15 YP_008723762.1 3864713 D 1355100 CDS YP_008723763.1 556553282 17432608 3865133..3866017 1 NC_022648.1 becomes active under oxidative stress; four conserved cysteines bind a zinc atom when they are in the reduced state and the enzyme is inactive; oxidative stress results in oxidized cysteines, release of zinc, and binding of Hsp33 to aggregation-prone proteins; forms dimers and higher order oligomers; Derived by automated computational analysis using gene prediction method: Protein Homology.; Hsp33 chaperonin 3866017 hslO 17432608 hslO Escherichia coli JJ1886 Hsp33 chaperonin YP_008723763.1 3865133 D 1355100 CDS YP_008723764.1 556553283 17432609 complement(3866140..3867348) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS609 3867348 17432609 P423_18960 Escherichia coli JJ1886 transposase IS609 YP_008723764.1 3866140 R 1355100 CDS YP_008723765.1 556553284 17432610 complement(3867651..3869375) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3869375 17432610 P423_18965 Escherichia coli JJ1886 membrane protein YP_008723765.1 3867651 R 1355100 CDS YP_008723766.1 556553285 17432611 3869753..3871375 1 NC_022648.1 PEP carboxykinase; PEP carboxylase; PEPCK; catalyzes the phosphorylation and decarboxylation of oxaloacetate to form phosphoenolpyruvate using ATP; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate carboxykinase 3871375 17432611 P423_18970 Escherichia coli JJ1886 phosphoenolpyruvate carboxykinase YP_008723766.1 3869753 D 1355100 CDS YP_008723767.1 556553286 17432612 complement(3871452..3872804) 1 NC_022648.1 membrane-localized osmosensor; histidine kinase; in high osmolarity EnvZ autophosphorylates itself and transfers phosphoryl group to OmpR; Derived by automated computational analysis using gene prediction method: Protein Homology.; osmolarity sensor protein 3872804 envZ 17432612 envZ Escherichia coli JJ1886 osmolarity sensor protein YP_008723767.1 3871452 R 1355100 CDS YP_008723768.1 556553287 17432613 complement(3872801..3873520) 1 NC_022648.1 part of two-component system EnvZ/OmpR; regulates transcription of outer membrane porin genes ompC/F; under high osmolarity EnvZ functions as kinase/phosphotransferase and phosphorylates OmpR; the result is increased expression of ompC and repression of ompF; also functions in regulation of other genes; forms dimers upon phosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3873520 ompR 17432613 ompR Escherichia coli JJ1886 transcriptional regulator YP_008723768.1 3872801 R 1355100 CDS YP_008723769.1 556553288 17432614 3873748..3874224 1 NC_022648.1 necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites; arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription elongation factor GreB 3874224 greB 17432614 greB Escherichia coli JJ1886 transcription elongation factor GreB YP_008723769.1 3873748 D 1355100 CDS YP_008723770.1 556553289 17432615 3874321..3876642 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription accessory protein 3876642 17432615 P423_18990 Escherichia coli JJ1886 transcription accessory protein YP_008723770.1 3874321 D 1355100 CDS YP_008723771.1 556553290 17432616 3877080..3877307 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 3877307 feoA 17432616 feoA Escherichia coli JJ1886 iron transporter YP_008723771.1 3877080 D 1355100 CDS YP_008723772.1 556553291 17432617 3877324..3879645 1 NC_022648.1 cytoplasmic membrane ferrous uptake system permease; mutations disrupt the ability of Escherichia coli to take up ferrous iron; GTP-binding protein which requires GTP for efficient iron(II) uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 3879645 feoB 17432617 feoB Escherichia coli JJ1886 iron transporter YP_008723772.1 3877324 D 1355100 CDS YP_008723773.1 556553292 17432618 3879656..3879892 1 NC_022648.1 regulatory protein that controls transcription of feoABC genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 3879892 17432618 P423_19005 Escherichia coli JJ1886 iron transporter YP_008723773.1 3879656 D 1355100 CDS YP_008723774.1 556554867 17432619 3880159..3880521 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 3880521 17432619 P423_19010 Escherichia coli JJ1886 transposase YP_008723774.1 3880159 D 1355100 CDS YP_008723775.1 556553293 17432620 complement(3880550..3881320) 1 NC_022648.1 Shows carboxylesterase activity with a preference for short chain fatty acid esters; involved in pimeloyl-CoA synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxylesterase BioH 3881320 17432620 P423_19015 Escherichia coli JJ1886 carboxylesterase BioH YP_008723775.1 3880550 R 1355100 CDS YP_008723776.1 556553294 17432621 3881358..3882041 1 NC_022648.1 required for utilization of DNA as the sole source of carbon and energy; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA utilization protein GntX 3882041 17432621 P423_19020 Escherichia coli JJ1886 DNA utilization protein GntX YP_008723776.1 3881358 D 1355100 CDS YP_008723777.1 556553295 17432622 3882100..3882675 1 NC_022648.1 cytoplasmic protein that may be involved in the utilization of double-stranded DNA as a carbon source; Derived by automated computational analysis using gene prediction method: Protein Homology.; Fe/S biogenesis protein NfuA 3882675 17432622 P423_19025 Escherichia coli JJ1886 Fe/S biogenesis protein NfuA YP_008723777.1 3882100 D 1355100 CDS YP_008723778.1 556553296 17432623 3883039..3884355 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Gnt-II system L-idonate transporter IdnT 3884355 17432623 P423_19030 Escherichia coli JJ1886 Gnt-II system L-idonate transporter IdnT YP_008723778.1 3883039 D 1355100 CDS YP_008723779.1 556553297 17432624 complement(3884465..3886549) 1 NC_022648.1 amylomaltase; acts to release glucose from maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-alpha-glucanotransferase 3886549 malQ 17432624 malQ Escherichia coli JJ1886 4-alpha-glucanotransferase YP_008723779.1 3884465 R 1355100 CDS YP_008723780.1 556553298 17432625 complement(3886559..3888952) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen phosphorylase 3888952 17432625 P423_19040 Escherichia coli JJ1886 glycogen phosphorylase YP_008723780.1 3886559 R 1355100 CDS YP_008723781.1 556553299 17432626 3889575..3892280 1 NC_022648.1 Positively regulates the transcription of the maltose regulon whose gene products are responsible for uptake and catabolism of malto-oligosaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3892280 17432626 P423_19045 Escherichia coli JJ1886 transcriptional regulator YP_008723781.1 3889575 D 1355100 CDS YP_008723782.1 556553300 17432627 complement(3892323..3892769) 1 NC_022648.1 catalyzes the conversion of terminal3'-phosphate of RNA to the 2',3'-cyclicphosphodiester; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA 3'-terminal-phosphate cyclase 3892769 17432627 P423_19050 Escherichia coli JJ1886 RNA 3'-terminal-phosphate cyclase YP_008723782.1 3892323 R 1355100 CDS YP_008723783.1 556554868 17432628 3892774..3893109 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 3893109 17432628 P423_19055 Escherichia coli JJ1886 transcriptional regulator YP_008723783.1 3892774 D 1355100 CDS YP_008723784.1 556553301 17432629 complement(3893091..3893849) 1 NC_022648.1 represses the glpD, glpFK, glpTQ, and glpACB operons involved in glycerol-3-phosphate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3893849 17432629 P423_19060 Escherichia coli JJ1886 transcriptional regulator YP_008723784.1 3893091 R 1355100 CDS YP_008723785.1 556553302 17432630 complement(3893866..3894696) 1 NC_022648.1 protease responsible for the cleavage between Ser and Asp residues of proteins in regions of high local hydrophilicity; Derived by automated computational analysis using gene prediction method: Protein Homology.; intramembrane serine protease GlpG 3894696 17432630 P423_19065 Escherichia coli JJ1886 intramembrane serine protease GlpG YP_008723785.1 3893866 R 1355100 CDS YP_008723786.1 556553303 17432631 complement(3894741..3895067) 1 NC_022648.1 belongs to rhodanese family; thiosulfate thiotransferase; in Escherichia coli this enzyme catalyzes the formation of thiocyanate from thiosulfate and cyanide with low efficiency; contains an active site cysteine; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiosulfate sulfurtransferase 3895067 glpE 17432631 glpE Escherichia coli JJ1886 thiosulfate sulfurtransferase YP_008723786.1 3894741 R 1355100 CDS YP_008723787.1 556553304 17432632 3895257..3896762 1 NC_022648.1 in Escherichia coli this homodimeric enzyme is expressed under aerobic conditions; anaerobic expression is repressed by the arcAB system; converts sn-glycerol-3-phosphate and ubiquinone-8 to dihydroxy acetone phosphate and ubiquinol-8; associates with the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate dehydrogenase 3896762 glpD 17432632 glpD Escherichia coli JJ1886 glycerol-3-phosphate dehydrogenase YP_008723787.1 3895257 D 1355100 CDS YP_008723788.1 556553305 17432633 complement(3896816..3897421) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3897421 17432633 P423_19080 Escherichia coli JJ1886 membrane protein YP_008723788.1 3896816 R 1355100 CDS YP_008723789.1 556554869 17432634 complement(3897424..3898191) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3898191 17432634 P423_19085 Escherichia coli JJ1886 hypothetical protein YP_008723789.1 3897424 R 1355100 CDS YP_008723790.1 556553306 17432635 complement(3898294..3899799) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter ATP-binding protein 3899799 17432635 P423_19095 Escherichia coli JJ1886 ABC transporter ATP-binding protein YP_008723790.1 3898294 R 1355100 CDS YP_008723791.1 556553307 17432636 complement(3899927..3902374) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen phosphorylase 3902374 17432636 P423_19100 Escherichia coli JJ1886 glycogen phosphorylase YP_008723791.1 3899927 R 1355100 CDS YP_008723792.1 556553308 17432637 complement(3902393..3903826) 1 NC_022648.1 catalyzes the formation of alpha-1,4-glucan chains from ADP-glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen synthase 3903826 glgA 17432637 glgA Escherichia coli JJ1886 glycogen synthase YP_008723792.1 3902393 R 1355100 CDS YP_008723793.1 556553309 17432638 complement(3903826..3905121) 1 NC_022648.1 catalyzes the formation of ADP-glucose and diphosphate from ATP and alpha-D-glucose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphate adenylyltransferase 3905121 glgC 17432638 glgC Escherichia coli JJ1886 glucose-1-phosphate adenylyltransferase YP_008723793.1 3903826 R 1355100 CDS YP_008723794.1 556553310 17432639 complement(3905139..3907112) 1 NC_022648.1 catalyzes the hydrolysis of the alpha-1,6-glucosidic linkages in partially depolymerized glycogen; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen-debranching protein 3907112 17432639 P423_19115 Escherichia coli JJ1886 glycogen-debranching protein YP_008723794.1 3905139 R 1355100 CDS YP_008723795.1 556553311 17432640 complement(3907109..3909295) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycogen-branching protein 3909295 17432640 P423_19120 Escherichia coli JJ1886 glycogen-branching protein YP_008723795.1 3907109 R 1355100 CDS YP_008723796.1 556553312 17432641 complement(3909568..3910671) 1 NC_022648.1 catalyzes the formation of 4-aspartyl phosphate from aspartate 4-semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate-semialdehyde dehydrogenase 3910671 17432641 P423_19125 Escherichia coli JJ1886 aspartate-semialdehyde dehydrogenase YP_008723796.1 3909568 R 1355100 CDS YP_008723797.1 556553313 17432642 3910863..3911456 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3911456 17432642 P423_19130 Escherichia coli JJ1886 membrane protein YP_008723797.1 3910863 D 1355100 CDS YP_008723798.1 556553314 17432643 complement(3911502..3912797) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA processing protein DprA 3912797 17432643 P423_19135 Escherichia coli JJ1886 DNA processing protein DprA YP_008723798.1 3911502 R 1355100 CDS YP_008723799.1 556554870 17432644 complement(3912704..3914800) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATP-dependent DNA helicase RecQ 3914800 17432644 P423_19140 Escherichia coli JJ1886 ATP-dependent DNA helicase RecQ YP_008723799.1 3912704 R 1355100 CDS YP_008723800.1 556553315 17432645 complement(3914941..3916281) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gluconate transporter 3916281 17432645 P423_19145 Escherichia coli JJ1886 gluconate transporter YP_008723800.1 3914941 R 1355100 CDS YP_008723801.1 556553316 17432646 complement(3916285..3916812) 1 NC_022648.1 thermoresistant; catalyzes the formation of 6-phospho-D-gluconate from gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; gluconate kinase 1 3916812 gntK 17432646 gntK Escherichia coli JJ1886 gluconate kinase 1 YP_008723801.1 3916285 R 1355100 CDS YP_008723802.1 556553317 17432647 complement(3916951..3917946) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 3917946 17432647 P423_19155 Escherichia coli JJ1886 transcriptional regulator YP_008723802.1 3916951 R 1355100 CDS YP_008723803.1 556553318 17432648 complement(3918039..3918734) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quercetin 2,3-dioxygenase 3918734 17432648 P423_19160 Escherichia coli JJ1886 quercetin 2,3-dioxygenase YP_008723803.1 3918039 R 1355100 CDS YP_008723804.1 556553319 17432649 complement(3918857..3919894) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 3919894 17432649 P423_19165 Escherichia coli JJ1886 oxidoreductase YP_008723804.1 3918857 R 1355100 CDS YP_008723805.1 556553320 17432650 3920228..3920716 1 NC_022648.1 YhhY; regulated by the fur regulator; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 3920716 17432650 P423_19170 Escherichia coli JJ1886 acetyltransferase YP_008723805.1 3920228 D 1355100 CDS YP_008723806.1 556553321 17432651 complement(3920777..3922510) 1 NC_022648.1 periplasmic enzyme; post-translationally processed into two subunits which are required for wild-type enzyme activity; cleaves the gammaglutamyl linkages of compounds such as glutathione and transfer the gammaglutamyl group to other amino acids and peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamyltranspeptidase 3922510 ggt 17432651 ggt Escherichia coli JJ1886 gamma-glutamyltranspeptidase YP_008723806.1 3920777 R 1355100 CDS YP_008723807.1 556553322 17432652 3922630..3923070 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3923070 17432652 P423_19180 Escherichia coli JJ1886 membrane protein YP_008723807.1 3922630 D 1355100 CDS YP_008723808.1 556553323 17432653 complement(3923057..3923800) 1 NC_022648.1 hydrolyzes diesters during transport at the inner face of the cytoplasmic membrane to glycerol-3-phosphate and alcohol; induced when cells are starved for inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytoplasmic glycerophosphodiester phosphodiesterase 3923800 ugpQ 17432653 ugpQ Escherichia coli JJ1886 cytoplasmic glycerophosphodiester phosphodiesterase YP_008723808.1 3923057 R 1355100 CDS YP_008723809.1 556553324 17432654 complement(3923797..3924867) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 3924867 17432654 P423_19190 Escherichia coli JJ1886 sugar ABC transporter ATP-binding protein YP_008723809.1 3923797 R 1355100 CDS YP_008723810.1 556553325 17432655 complement(3924869..3925714) 1 NC_022648.1 with UgpABC is involved in uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate transporter membrane protein 3925714 17432655 P423_19195 Escherichia coli JJ1886 glycerol-3-phosphate transporter membrane protein YP_008723810.1 3924869 R 1355100 CDS YP_008723811.1 556553326 17432656 complement(3925711..3926598) 1 NC_022648.1 with UgpEC is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate transporter permease 3926598 17432656 P423_19200 Escherichia coli JJ1886 glycerol-3-phosphate transporter permease YP_008723811.1 3925711 R 1355100 CDS YP_008723812.1 556553327 17432657 complement(3926696..3928012) 1 NC_022648.1 with UgpACE is involved in the uptake of glycerol-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate ABC transporter substrate-binding protein 3928012 17432657 P423_19205 Escherichia coli JJ1886 glycerol-3-phosphate ABC transporter substrate-binding protein YP_008723812.1 3926696 R 1355100 CDS YP_008723813.1 556554871 17432659 complement(3928409..3929110) 1 NC_022648.1 with LivGHMJ and LivGHMK is part of the high-affinity branched-chain amino acid transport system; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; amino acid ABC transporter ATP-binding protein 3929110 livF 17432659 livF Escherichia coli JJ1886 amino acid ABC transporter ATP-binding protein YP_008723813.1 3928409 R 1355100 CDS YP_008723814.1 556554872 17432660 complement(3929124..3929891) 1 NC_022648.1 Part of the ABC transporter complexes LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; amino acid ABC transporter ATP-binding protein 3929891 livG 17432660 livG Escherichia coli JJ1886 amino acid ABC transporter ATP-binding protein YP_008723814.1 3929124 R 1355100 CDS YP_008723815.1 556553328 17432661 complement(3929888..3931165) 1 NC_022648.1 Part of the ABC transporter complex LivFGHMJ and LivFGHMK involved in the high-affinity transport of branched-chain amino acids; LivFGHMK is specific for the transport of leucine, while LivFGHMJ is a transporter for leucine, isoleucine, and valine; Derived by automated computational analysis using gene prediction method: Protein Homology.; leucine/isoleucine/valine transporter permease subunit 3931165 livM 17432661 livM Escherichia coli JJ1886 leucine/isoleucine/valine transporter permease subunit YP_008723815.1 3929888 R 1355100 CDS YP_008723816.1 556553329 17432662 complement(3931162..3932088) 1 NC_022648.1 LivHMGF is the membrane component of the LIV-I/LS branched-chain amino acid transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid transporter permease subunit LivH 3932088 17432662 P423_19230 Escherichia coli JJ1886 branched-chain amino acid transporter permease subunit LivH YP_008723816.1 3931162 R 1355100 CDS YP_008723817.1 556553330 17432663 complement(3932136..3933326) 1 NC_022648.1 with LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 3933326 17432663 P423_19235 Escherichia coli JJ1886 amino acid ABC transporter substrate-binding protein YP_008723817.1 3932136 R 1355100 CDS YP_008723818.1 556553331 17432664 3933668..3934051 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3934051 17432664 P423_19240 Escherichia coli JJ1886 hypothetical protein YP_008723818.1 3933668 D 1355100 CDS YP_008723819.1 556553332 17432665 complement(3934048..3934575) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 3934575 17432665 P423_19245 Escherichia coli JJ1886 acetyltransferase YP_008723819.1 3934048 R 1355100 CDS YP_008723820.1 556553333 17432666 complement(3934582..3934848) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin-antitoxin system protein 3934848 17432666 P423_19250 Escherichia coli JJ1886 toxin-antitoxin system protein YP_008723820.1 3934582 R 1355100 CDS YP_008723821.1 556553334 17432667 complement(3934997..3936100) 1 NC_022648.1 with LivFGHM is involved in the high affinity leucine transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter substrate-binding protein 3936100 17432667 P423_19255 Escherichia coli JJ1886 amino acid ABC transporter substrate-binding protein YP_008723821.1 3934997 R 1355100 CDS YP_008723822.1 556553335 17432668 complement(3936371..3937225) 1 NC_022648.1 binds with the catalytic core of RNA polymerase to produce the holoenzyme; this sigma factor is responsible for the expression of heat shock promoters; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase factor sigma-32 3937225 17432668 P423_19260 Escherichia coli JJ1886 RNA polymerase factor sigma-32 YP_008723822.1 3936371 R 1355100 CDS YP_008723823.1 556553336 17432669 complement(3937470..3938528) 1 NC_022648.1 ABC transporter, membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsX 3938528 ftsX 17432669 ftsX Escherichia coli JJ1886 cell division protein FtsX YP_008723823.1 3937470 R 1355100 CDS YP_008723824.1 556553337 17432670 complement(3938521..3939189) 1 NC_022648.1 Part of the ABC transporter complex tauABC involved in taurine import; Derived by automated computational analysis using gene prediction method: Protein Homology.; taurine ABC transporter ATP-binding protein 3939189 tauB 17432670 tauB Escherichia coli JJ1886 taurine ABC transporter ATP-binding protein YP_008723824.1 3938521 R 1355100 CDS YP_008723825.1 556553338 17432671 complement(3939192..3940688) 1 NC_022648.1 cell division protein; signal recognition protein receptor; functions in the targeting and insertion of membrane proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsY 3940688 17432671 P423_19275 Escherichia coli JJ1886 cell division protein FtsY YP_008723825.1 3939192 R 1355100 CDS YP_008723826.1 556553339 17432672 3940838..3941434 1 NC_022648.1 catalyzes the methylation of 16S rRNA at position G966; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 3941434 rsmD 17432672 rsmD Escherichia coli JJ1886 16S rRNA methyltransferase YP_008723826.1 3940838 D 1355100 CDS YP_008723827.1 556553340 17432673 3941424..3941693 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3941693 17432673 P423_19285 Escherichia coli JJ1886 membrane protein YP_008723827.1 3941424 D 1355100 CDS YP_008723828.1 556553341 17432674 complement(3941696..3942055) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3942055 17432674 P423_19290 Escherichia coli JJ1886 hypothetical protein YP_008723828.1 3941696 R 1355100 CDS YP_008723829.1 556553342 17432675 3942196..3942822 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3942822 17432675 P423_19295 Escherichia coli JJ1886 membrane protein YP_008723829.1 3942196 D 1355100 CDS YP_008723830.1 556553343 17432676 3942896..3945094 1 NC_022648.1 P-type ATPase involved in the export of lead, cadmium, zinc and mercury; Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc/cadmium/mercury/lead-transporting ATPase 3945094 zntA 17432676 zntA Escherichia coli JJ1886 zinc/cadmium/mercury/lead-transporting ATPase YP_008723830.1 3942896 D 1355100 CDS YP_008723831.1 556553344 17432677 complement(3945196..3945441) 1 NC_022648.1 TusA; transfers sulfur to TusBCD complex; involved in thiouridation of U34 position of some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfurtransferase 3945441 17432677 P423_19305 Escherichia coli JJ1886 sulfurtransferase YP_008723831.1 3945196 R 1355100 CDS YP_008723832.1 556553345 17432678 3945651..3946316 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3946316 17432678 P423_19310 Escherichia coli JJ1886 membrane protein YP_008723832.1 3945651 D 1355100 CDS YP_008723833.1 556553346 17432679 3946389..3946946 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3946946 17432679 P423_19315 Escherichia coli JJ1886 hypothetical protein YP_008723833.1 3946389 D 1355100 CDS YP_008723834.1 556553347 17432680 complement(3946950..3948200) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 3948200 17432680 P423_19320 Escherichia coli JJ1886 MFS transporter YP_008723834.1 3946950 R 1355100 CDS YP_008723835.1 556553348 17432681 3948299..3949348 1 NC_022648.1 transport of quorum-sensing signal; mutations in this gene alters the transport of the quorum-sensing signal autoinducer 2 (AI-2) which affects expression of a large number of genes; Derived by automated computational analysis using gene prediction method: Protein Homology.; pheromone autoinducer 2 transporter 3949348 tqsA 17432681 tqsA Escherichia coli JJ1886 pheromone autoinducer 2 transporter YP_008723835.1 3948299 D 1355100 CDS YP_008723836.1 556553349 17432682 3949403..3949990 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ACP synthase 3949990 17432682 P423_19330 Escherichia coli JJ1886 ACP synthase YP_008723836.1 3949403 D 1355100 CDS YP_008723837.1 556553350 17432683 3950101..3951675 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel ABC transporter substrate-binding protein 3951675 17432683 P423_19335 Escherichia coli JJ1886 nickel ABC transporter substrate-binding protein YP_008723837.1 3950101 D 1355100 CDS YP_008723838.1 556553351 17432684 3951675..3952619 1 NC_022648.1 with NikACDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel ABC transporter permease 3952619 17432684 P423_19340 Escherichia coli JJ1886 nickel ABC transporter permease YP_008723838.1 3951675 D 1355100 CDS YP_008723839.1 556553352 17432685 3952616..3953449 1 NC_022648.1 with NikABDE is involved in nickel transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel ABC transporter permease 3953449 nikC 17432685 nikC Escherichia coli JJ1886 nickel ABC transporter permease YP_008723839.1 3952616 D 1355100 CDS YP_008723840.1 556553353 17432687 3955022..3955423 1 NC_022648.1 Inhibits transcription at high concentrations of nickel; Derived by automated computational analysis using gene prediction method: Protein Homology.; nickel responsive regulator 3955423 17432687 P423_19355 Escherichia coli JJ1886 nickel responsive regulator YP_008723840.1 3955022 D 1355100 CDS YP_008723841.1 556554873 17432688 complement(3955487..3955582) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3955582 17432688 P423_19360 Escherichia coli JJ1886 hypothetical protein YP_008723841.1 3955487 R 1355100 CDS YP_008723842.1 556553354 17432689 3955622..3956368 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 3956368 17432689 P423_19365 Escherichia coli JJ1886 regulatory protein YP_008723842.1 3955622 D 1355100 CDS YP_008723843.1 556553355 17432690 3956393..3956866 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS suar transporter subunit IIA 3956866 17432690 P423_19370 Escherichia coli JJ1886 PTS suar transporter subunit IIA YP_008723843.1 3956393 D 1355100 CDS YP_008723844.1 556553356 17432691 3956863..3957144 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter subunit IIB 3957144 17432691 P423_19375 Escherichia coli JJ1886 PTS sugar transporter subunit IIB YP_008723844.1 3956863 D 1355100 CDS YP_008723845.1 556553357 17432692 3957221..3958579 1 NC_022648.1 with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIC 3958579 gatC 17432692 gatC Escherichia coli JJ1886 PTS galactitol transporter subunit IIC YP_008723845.1 3957221 D 1355100 CDS YP_008723846.1 556553358 17432693 3958572..3960080 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbohydrate kinase 3960080 17432693 P423_19385 Escherichia coli JJ1886 carbohydrate kinase YP_008723846.1 3958572 D 1355100 CDS YP_008723847.1 556554874 17432694 3960070..3960339 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphocarrier protein HPr 3960339 17432694 P423_19390 Escherichia coli JJ1886 phosphocarrier protein HPr YP_008723847.1 3960070 D 1355100 CDS YP_008723848.1 556553359 17432695 3960371..3961222 1 NC_022648.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 3961222 gatY 17432695 gatY Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008723848.1 3960371 D 1355100 CDS YP_008723849.1 556553360 17432696 complement(3961331..3962455) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3962455 17432696 P423_19400 Escherichia coli JJ1886 membrane protein YP_008723849.1 3961331 R 1355100 CDS YP_008723850.1 556554875 17432697 complement(3962455..3965190) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; multidrug ABC transporter ATP-binding protein 3965190 17432697 P423_19405 Escherichia coli JJ1886 multidrug ABC transporter ATP-binding protein YP_008723850.1 3962455 R 1355100 CDS YP_008723851.1 556553361 17432698 complement(3965187..3966254) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3966254 17432698 P423_19410 Escherichia coli JJ1886 membrane protein YP_008723851.1 3965187 R 1355100 CDS YP_008723852.1 556553362 17432699 3966977..3968041 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3968041 17432699 P423_19415 Escherichia coli JJ1886 membrane protein YP_008723852.1 3966977 D 1355100 CDS YP_008723853.1 556553363 17432700 complement(3968128..3969321) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3969321 17432700 P423_19420 Escherichia coli JJ1886 membrane protein YP_008723853.1 3968128 R 1355100 CDS YP_008723854.1 556553364 17432701 3969553..3971052 1 NC_022648.1 involved in the transport of inorganic phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter PitA 3971052 17432701 P423_19425 Escherichia coli JJ1886 phosphate transporter PitA YP_008723854.1 3969553 D 1355100 CDS YP_008723855.1 556553365 17432702 complement(3971123..3971458) 1 NC_022648.1 ppGpp-dependent, membrane associated, stress protein produced under conditions of nutrient deprivation, osmotic shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein B 3971458 17432702 P423_19430 Escherichia coli JJ1886 universal stress protein B YP_008723855.1 3971123 R 1355100 CDS YP_008723856.1 556553366 17432703 3971849..3972283 1 NC_022648.1 involved in resistance to DNA-damaging agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein A 3972283 17432703 P423_19435 Escherichia coli JJ1886 universal stress protein A YP_008723856.1 3971849 D 1355100 CDS YP_008723857.1 556553367 17432704 3972600..3974069 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 3974069 17432704 P423_19440 Escherichia coli JJ1886 MFS transporter YP_008723857.1 3972600 D 1355100 CDS YP_008723858.1 556553368 17432705 complement(3974118..3974870) 1 NC_022648.1 predicted SAM-dependent methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyltransferase 3974870 17432705 P423_19445 Escherichia coli JJ1886 methyltransferase YP_008723858.1 3974118 R 1355100 CDS YP_008723859.1 556553369 17432706 complement(3974878..3976920) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oligopeptidase A 3976920 17432706 P423_19450 Escherichia coli JJ1886 oligopeptidase A YP_008723859.1 3974878 R 1355100 CDS YP_008723860.1 556553370 17432707 3977123..3977965 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 3977965 17432707 P423_19455 Escherichia coli JJ1886 hypothetical protein YP_008723860.1 3977123 D 1355100 CDS YP_008723861.1 556553371 17432708 3978037..3979389 1 NC_022648.1 catalyzes the reduction of 2 glutathione to glutathione disulfide; maintains high levels of reduced glutathione in the cytosol; involved in redox regulation and oxidative defense; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione reductase 3979389 17432708 P423_19460 Escherichia coli JJ1886 glutathione reductase YP_008723861.1 3978037 D 1355100 CDS YP_008723862.1 556554876 17432709 complement(3979443..3979526) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3979526 17432709 P423_19465 Escherichia coli JJ1886 hypothetical protein YP_008723862.1 3979443 R 1355100 CDS YP_008723863.1 556553372 17432710 3979861..3980286 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arsenate reductase 3980286 17432710 P423_19470 Escherichia coli JJ1886 arsenate reductase YP_008723863.1 3979861 D 1355100 CDS YP_008723864.1 556553373 17432711 3981472..3982038 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 3982038 17432711 P423_19480 Escherichia coli JJ1886 membrane protein YP_008723864.1 3981472 D 1355100 CDS YP_008723865.1 556553374 17432712 3982191..3982721 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 3982721 17432712 P423_19485 Escherichia coli JJ1886 LuxR family transcriptional regulator YP_008723865.1 3982191 D 1355100 CDS YP_008723866.1 556553375 17432713 complement(3982778..3983806) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hemin transporter 3983806 17432713 P423_19490 Escherichia coli JJ1886 hemin transporter YP_008723866.1 3982778 R 1355100 CDS YP_008723867.1 556553376 17432714 complement(3983855..3985837) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ligand-gated channel protein 3985837 17432714 P423_19495 Escherichia coli JJ1886 ligand-gated channel protein YP_008723867.1 3983855 R 1355100 CDS YP_008723868.1 556553377 17432715 3986521..3987435 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ABC transporter substrate-binding protein 3987435 17432715 P423_19500 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008723868.1 3986521 D 1355100 CDS YP_008723869.1 556553378 17432716 3987455..3988792 1 NC_022648.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology.; coproporphyrinogen III oxidase 3988792 17432716 P423_19505 Escherichia coli JJ1886 coproporphyrinogen III oxidase YP_008723869.1 3987455 D 1355100 CDS YP_008723870.1 556553379 17432717 3988805..3989299 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ShuX 3989299 17432717 P423_19510 Escherichia coli JJ1886 ShuX YP_008723870.1 3988805 D 1355100 CDS YP_008723871.1 556553380 17432718 3989299..3989922 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ShuY-like protein 3989922 17432718 P423_19515 Escherichia coli JJ1886 ShuY-like protein YP_008723871.1 3989299 D 1355100 CDS YP_008723872.1 556553381 17432719 3990007..3990963 1 NC_022648.1 with BtuD and BtuF transports vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vtamin B12-transporter permease 3990963 17432719 P423_19520 Escherichia coli JJ1886 vtamin B12-transporter permease YP_008723872.1 3990007 D 1355100 CDS YP_008723873.1 556554877 17432720 3990960..3991730 1 NC_022648.1 with HmuTU is involved in the transport of hemin; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hemin ABC transporter ATP-binding protein 3991730 hmuV 17432720 hmuV Escherichia coli JJ1886 hemin ABC transporter ATP-binding protein YP_008723873.1 3990960 D 1355100 CDS YP_008723874.1 556553382 17432721 complement(3991782..3992441) 1 NC_022648.1 inner membrane protein involved in cell density-dependent acid resistance; part of the acid fitness island (AFI) of E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.; magnesium transporter ATPase 3992441 17432721 P423_19530 Escherichia coli JJ1886 magnesium transporter ATPase YP_008723874.1 3991782 R 1355100 CDS YP_008723875.1 556553383 17432722 complement(3992493..3992831) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-resistance protein HdeB 3992831 hdeB 17432722 hdeB Escherichia coli JJ1886 acid-resistance protein HdeB YP_008723875.1 3992493 R 1355100 CDS YP_008723876.1 556553384 17432723 complement(3992935..3993267) 1 NC_022648.1 inactive form; Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-resistance protein HdeA 3993267 17432723 P423_19540 Escherichia coli JJ1886 acid-resistance protein HdeA YP_008723876.1 3992935 R 1355100 CDS YP_008723877.1 556553385 17432724 3993522..3994094 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acid-resistance protein HdeD 3994094 17432724 P423_19545 Escherichia coli JJ1886 acid-resistance protein HdeD YP_008723877.1 3993522 D 1355100 CDS YP_008723878.1 556553386 17432725 3994893..3995420 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 3995420 17432725 P423_19550 Escherichia coli JJ1886 LuxR family transcriptional regulator YP_008723878.1 3994893 D 1355100 CDS YP_008723879.1 556553387 17432726 3995759..3996916 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 3996916 17432726 P423_19555 Escherichia coli JJ1886 multidrug transporter YP_008723879.1 3995759 D 1355100 CDS YP_008723880.1 556553388 17432727 3996941..4000054 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 4000054 17432727 P423_19560 Escherichia coli JJ1886 multidrug transporter YP_008723880.1 3996941 D 1355100 CDS YP_008723881.1 556553389 17432729 complement(4001513..4002337) 1 NC_022648.1 regulates genes in response to acid and/or during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4002337 17432729 P423_19570 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008723881.1 4001513 R 1355100 CDS YP_008723882.1 556553390 17432730 complement(4002705..4004105) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamate decarboxylase 4004105 17432730 P423_19575 Escherichia coli JJ1886 glutamate decarboxylase YP_008723882.1 4002705 R 1355100 CDS YP_008723883.1 556553391 17432731 complement(4004316..4005713) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C peroxidase 4005713 17432731 P423_19580 Escherichia coli JJ1886 cytochrome C peroxidase YP_008723883.1 4004316 R 1355100 CDS YP_008723884.1 556553392 17432732 4006118..4007767 1 NC_022648.1 cytoplasmic; catalyzes the hydrolysis of trehalose to glucose; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalase 4007767 treF 17432732 treF Escherichia coli JJ1886 trehalase YP_008723884.1 4006118 D 1355100 CDS YP_008723885.1 556553393 17432733 complement(4007818..4008420) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 4008420 17432733 P423_19590 Escherichia coli JJ1886 LuxR family transcriptional regulator YP_008723885.1 4007818 R 1355100 CDS YP_008723886.1 556553394 17432734 4008868..4009839 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LysR family transcripitonal regulator 4009839 17432734 P423_19595 Escherichia coli JJ1886 LysR family transcripitonal regulator YP_008723886.1 4008868 D 1355100 CDS YP_008723887.1 556553395 17432735 4009887..4010900 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4010900 17432735 P423_19600 Escherichia coli JJ1886 membrane protein YP_008723887.1 4009887 D 1355100 CDS YP_008723888.1 556553396 17432736 4011293..4012615 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4012615 17432736 P423_19605 Escherichia coli JJ1886 transporter YP_008723888.1 4011293 D 1355100 CDS YP_008723889.1 556553397 17432737 complement(4012794..4014854) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4014854 17432737 P423_19610 Escherichia coli JJ1886 hypothetical protein YP_008723889.1 4012794 R 1355100 CDS YP_008723890.1 556553398 17432738 complement(4014924..4015691) 1 NC_022648.1 in Escherichia coli this protein is involved in flagellar function; Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP phosphodiesterase 4015691 17432738 P423_19615 Escherichia coli JJ1886 cyclic di-GMP phosphodiesterase YP_008723890.1 4014924 R 1355100 CDS YP_008723891.1 556553399 17432739 4015839..4016852 1 NC_022648.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate-6-phosphate from 2-dehydro-3-deoxy-D-gluconate; Derived by automated computational analysis using gene prediction method: Protein Homology.; ketodeoxygluconokinase 4016852 17432739 P423_19620 Escherichia coli JJ1886 ketodeoxygluconokinase YP_008723891.1 4015839 D 1355100 CDS YP_008723892.1 556553400 17432740 complement(4016948..4018444) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4018444 17432740 P423_19625 Escherichia coli JJ1886 hypothetical protein YP_008723892.1 4016948 R 1355100 CDS YP_008723893.1 556553401 17432741 complement(4018664..4019950) 1 NC_022648.1 involved in the transport of C4-dicarboxylates across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 4019950 17432741 P423_19630 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter YP_008723893.1 4018664 R 1355100 CDS YP_008723894.1 556553402 17432742 complement(4020133..4022121) 1 NC_022648.1 HmsP in Yersinia pestis plays a role in invasion of epithelial cells; the EAL-domain portion of HmsP from Y. pestis shows phosphodiesterase activity which is required for the inhibition of biofilm formation; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm formation regulator HmsP 4022121 17432742 P423_19635 Escherichia coli JJ1886 biofilm formation regulator HmsP YP_008723894.1 4020133 R 1355100 CDS YP_008723895.1 556553403 17432743 complement(4022203..4025676) 1 NC_022648.1 cellulose is produced by the multicellular morphotypes of E. coli and Salmonella typhimurium; the cellulose biosynthesis genes bcsA, bcsB, bcsZ and bcsC are constitutively transcribed, however, cellulose synthesis is dependent on the expression of adrA; Derived by automated computational analysis using gene prediction method: Protein Homology.; cellulose synthase subunit BcsC 4025676 17432743 P423_19640 Escherichia coli JJ1886 cellulose synthase subunit BcsC YP_008723895.1 4022203 R 1355100 CDS YP_008723896.1 556553404 17432744 complement(4025658..4026764) 1 NC_022648.1 catalyzes the hydrolysis of 1,4-beta-D-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease III 4026764 17432744 P423_19645 Escherichia coli JJ1886 endonuclease III YP_008723896.1 4025658 R 1355100 CDS YP_008723897.1 556553405 17432745 complement(4026771..4029047) 1 NC_022648.1 binds the cellulose synthase activator, bis-(3'-5') cyclic diguanylic acid (c-di-GMP); Derived by automated computational analysis using gene prediction method: Protein Homology.; cyclic di-GMP regulator CdgR 4029047 17432745 P423_19650 Escherichia coli JJ1886 cyclic di-GMP regulator CdgR YP_008723897.1 4026771 R 1355100 CDS YP_008723898.1 556553406 17432746 complement(4029121..4031739) 1 NC_022648.1 polymerizes uridine 5'-diphosphate glucose to cellulose; acts with BcsB, BcsZ and BcsC in cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cellulose synthase catalytic subunit 4031739 bcsA 17432746 bcsA Escherichia coli JJ1886 cellulose synthase catalytic subunit YP_008723898.1 4029121 R 1355100 CDS YP_008723899.1 556553407 17432747 complement(4031736..4032488) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein 4032488 17432747 P423_19660 Escherichia coli JJ1886 cell division protein YP_008723899.1 4031736 R 1355100 CDS YP_008723900.1 556553408 17432748 complement(4032500..4032688) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4032688 17432748 P423_19665 Escherichia coli JJ1886 hypothetical protein YP_008723900.1 4032500 R 1355100 CDS YP_008723901.1 556553409 17432749 4032961..4034532 1 NC_022648.1 required for cellulose biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; cellulose biosynthesis protein BcsE 4034532 17432749 P423_19670 Escherichia coli JJ1886 cellulose biosynthesis protein BcsE YP_008723901.1 4032961 D 1355100 CDS YP_008723902.1 556553410 17432750 4034529..4034720 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4034720 17432750 P423_19675 Escherichia coli JJ1886 membrane protein YP_008723902.1 4034529 D 1355100 CDS YP_008723903.1 556553411 17432751 4034717..4036396 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4036396 17432751 P423_19680 Escherichia coli JJ1886 membrane protein YP_008723903.1 4034717 D 1355100 CDS YP_008723904.1 556554878 17432752 complement(4036482..4036589) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4036589 17432752 P423_19685 Escherichia coli JJ1886 hypothetical protein YP_008723904.1 4036482 R 1355100 CDS YP_008723905.1 556554879 17432753 complement(4036965..4037072) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4037072 17432753 P423_19690 Escherichia coli JJ1886 hypothetical protein YP_008723905.1 4036965 R 1355100 CDS YP_008723906.1 556554880 17432754 complement(4037448..4037555) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4037555 17432754 P423_19695 Escherichia coli JJ1886 hypothetical protein YP_008723906.1 4037448 R 1355100 CDS YP_008723907.1 556553412 17432755 4038031..4039302 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4039302 17432755 P423_19700 Escherichia coli JJ1886 transporter YP_008723907.1 4038031 D 1355100 CDS YP_008723908.1 556553413 17432756 complement(4039332..4040336) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 4040336 17432756 P423_19705 Escherichia coli JJ1886 peptide ABC transporter ATP-binding protein YP_008723908.1 4039332 R 1355100 CDS YP_008723909.1 556553414 17432757 complement(4040333..4041316) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter ATP-binding protein 4041316 oppD 17432757 oppD Escherichia coli JJ1886 peptide ABC transporter ATP-binding protein YP_008723909.1 4040333 R 1355100 CDS YP_008723910.1 556553415 17432758 complement(4041327..4042229) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter 4042229 17432758 P423_19715 Escherichia coli JJ1886 peptide ABC transporter YP_008723910.1 4041327 R 1355100 CDS YP_008723911.1 556553416 17432759 complement(4042239..4043258) 1 NC_022648.1 transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 4043258 17432759 P423_19720 Escherichia coli JJ1886 peptide ABC transporter permease YP_008723911.1 4042239 R 1355100 CDS YP_008723912.1 556553417 17432761 complement(4043565..4045172) 1 NC_022648.1 DppABCDF is involved in the transport of dipeptides; also binds heme and mediates chemotaxis to dipeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter substrate-binding protein 4045172 17432761 P423_19730 Escherichia coli JJ1886 peptide ABC transporter substrate-binding protein YP_008723912.1 4043565 R 1355100 CDS YP_008723913.1 556554881 17432762 complement(4045524..4045787) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4045787 17432762 P423_19735 Escherichia coli JJ1886 hypothetical protein YP_008723913.1 4045524 R 1355100 CDS YP_008723914.1 556553418 17432764 complement(4046084..4047775) 1 NC_022648.1 catalyzes the addition of a phosphoethanolamine group to the outer Kdo residue of lipopolysaccharide; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoethanolamine transferase 4047775 17432764 P423_19745 Escherichia coli JJ1886 phosphoethanolamine transferase YP_008723914.1 4046084 R 1355100 CDS YP_008723915.1 556553419 17432765 complement(4048099..4049307) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4049307 17432765 P423_19750 Escherichia coli JJ1886 membrane protein YP_008723915.1 4048099 R 1355100 CDS YP_008723916.1 556553420 17432766 complement(4049536..4050234) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4050234 17432766 P423_19755 Escherichia coli JJ1886 hypothetical protein YP_008723916.1 4049536 R 1355100 CDS YP_008723917.1 556553421 17432767 4050392..4050955 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-3-methyladenine glycosylase 4050955 17432767 P423_19760 Escherichia coli JJ1886 DNA-3-methyladenine glycosylase YP_008723917.1 4050392 D 1355100 CDS YP_008723918.1 556553422 17432768 4050952..4051392 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 4051392 17432768 P423_19765 Escherichia coli JJ1886 acetyltransferase YP_008723918.1 4050952 D 1355100 CDS YP_008723919.1 556553423 17432769 complement(4051361..4053694) 1 NC_022648.1 catalyzes the formation of biotin from biotin sulfoxide; Derived by automated computational analysis using gene prediction method: Protein Homology.; biotin sulfoxide reductase 4053694 bisC 17432769 bisC Escherichia coli JJ1886 biotin sulfoxide reductase YP_008723919.1 4051361 R 1355100 CDS YP_008723920.1 556553424 17432770 4053847..4054506 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein 4054506 17432770 P423_19775 Escherichia coli JJ1886 outer membrane lipoprotein YP_008723920.1 4053847 D 1355100 CDS YP_008723921.1 556553425 17432771 4054610..4055584 1 NC_022648.1 catalyzes the formation of glycolate from glyoxylate and glycerate from hydroxypyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional glyoxylate/hydroxypyruvate reductase B 4055584 17432771 P423_19780 Escherichia coli JJ1886 bifunctional glyoxylate/hydroxypyruvate reductase B YP_008723921.1 4054610 D 1355100 CDS YP_008723922.1 556553426 17432772 complement(4055634..4056344) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4056344 17432772 P423_19785 Escherichia coli JJ1886 hypothetical protein YP_008723922.1 4055634 R 1355100 CDS YP_008723923.1 556553427 17432773 4056778..4057068 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 4057068 17432773 P423_19790 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008723923.1 4056778 D 1355100 CDS YP_008723924.1 556553428 17432774 4057349..4057561 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cold-shock protein 4057561 17432774 P423_19795 Escherichia coli JJ1886 cold-shock protein YP_008723924.1 4057349 D 1355100 CDS YP_008723925.1 556553429 17432775 complement(4057749..4057901) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4057901 17432775 P423_19800 Escherichia coli JJ1886 hypothetical protein YP_008723925.1 4057749 R 1355100 CDS YP_008723926.1 556553430 17432776 complement(4058223..4060292) 1 NC_022648.1 glycine--tRNA ligase beta chain; glyS; class II aminoacyl tRNA synthetase; tetramer of alpha(2)beta(2); catalyzes a two-step reaction; first charging a glycine molecule by linking the carboxyl group to the alpha-phosphate of ATP; second by transfer of the aminoacyl-adenylate to its tRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycyl-tRNA synthetase 4060292 glyS 17432776 glyS Escherichia coli JJ1886 glycyl-tRNA synthetase YP_008723926.1 4058223 R 1355100 CDS YP_008723927.1 556553431 17432777 complement(4060302..4061213) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycyl-tRNA synthetase 4061213 17432777 P423_19810 Escherichia coli JJ1886 glycyl-tRNA synthetase YP_008723927.1 4060302 R 1355100 CDS YP_008723928.1 556553432 17432778 complement(4061308..4061607) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4061607 17432778 P423_19815 Escherichia coli JJ1886 membrane protein YP_008723928.1 4061308 R 1355100 CDS YP_008723929.1 556553433 17432779 4061782..4062777 1 NC_022648.1 involved in enterobacterial common antigen biosynthesis; catalyzes the addition of O-acetyl groups to the N-acetyl-D-glucosamine residues of the trisaccharide repeat units of the enterobacterial common antigen; Derived by automated computational analysis using gene prediction method: Protein Homology.; O-acetyltransferase 4062777 17432779 P423_19820 Escherichia coli JJ1886 O-acetyltransferase YP_008723929.1 4061782 D 1355100 CDS YP_008723930.1 556553434 17432780 complement(4062819..4063256) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4063256 17432780 P423_19825 Escherichia coli JJ1886 hypothetical protein YP_008723930.1 4062819 R 1355100 CDS YP_008723931.1 556553435 17432781 complement(4063302..4063643) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4063643 17432781 P423_19830 Escherichia coli JJ1886 hypothetical protein YP_008723931.1 4063302 R 1355100 CDS YP_008723932.1 556553436 17432782 complement(4063812..4065266) 1 NC_022648.1 catalyzes the formation of D-xylulose-5-phosphate fro D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylulokinase 4065266 17432782 P423_19835 Escherichia coli JJ1886 xylulokinase YP_008723932.1 4063812 R 1355100 CDS YP_008723933.1 556553437 17432783 complement(4065337..4066659) 1 NC_022648.1 catalyzes the interconversion of D-xylose to D-xylulose; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose isomerase 4066659 17432783 P423_19840 Escherichia coli JJ1886 xylose isomerase YP_008723933.1 4065337 R 1355100 CDS YP_008723934.1 556553438 17432784 4067025..4068017 1 NC_022648.1 periplasmic substrate-binding component of the ATP-dependent xylose transport system; high affinity; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter substrate-binding protein 4068017 xylF 17432784 xylF Escherichia coli JJ1886 xylose ABC transporter substrate-binding protein YP_008723934.1 4067025 D 1355100 CDS YP_008723935.1 556553439 17432785 4068095..4069636 1 NC_022648.1 with XylFH is part of the high affinity xylose ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter ATP-binding protein 4069636 17432785 P423_19850 Escherichia coli JJ1886 xylose ABC transporter ATP-binding protein YP_008723935.1 4068095 D 1355100 CDS YP_008723936.1 556553440 17432786 4069614..4070795 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; xylose ABC transporter permease 4070795 17432786 P423_19855 Escherichia coli JJ1886 xylose ABC transporter permease YP_008723936.1 4069614 D 1355100 CDS YP_008723937.1 556553441 17432787 4070873..4072051 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4072051 17432787 P423_19860 Escherichia coli JJ1886 transcriptional regulator YP_008723937.1 4070873 D 1355100 CDS YP_008723938.1 556553442 17432788 complement(4072159..4072983) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4072983 17432788 P423_19865 Escherichia coli JJ1886 hypothetical protein YP_008723938.1 4072159 R 1355100 CDS YP_008723939.1 556553443 17432789 4073303..4075333 1 NC_022648.1 periplasmic enzyme that degrades maltodextrins that enter via the outer membrane porin LamB; hydrolyzes alpha-(1,4) glycosidic linkages; contains internal disulfide bonds; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-amylase 4075333 malS 17432789 malS Escherichia coli JJ1886 alpha-amylase YP_008723939.1 4073303 D 1355100 CDS YP_008723940.1 556553444 17432790 4075511..4076764 1 NC_022648.1 transaminase C; catalyzes transamination of alanine, valine, and 2-aminobutyrate with their respective 2-keto acids; also catalyzes terminal step in valine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; valine--pyruvate aminotransferase 4076764 avtA 17432790 avtA Escherichia coli JJ1886 valine--pyruvate aminotransferase YP_008723940.1 4075511 D 1355100 CDS YP_008723941.1 556553445 17432791 complement(4076803..4077276) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; electron transporter 4077276 17432791 P423_19880 Escherichia coli JJ1886 electron transporter YP_008723941.1 4076803 R 1355100 CDS YP_008723942.1 556553446 17432792 complement(4077378..4078226) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4078226 17432792 P423_19885 Escherichia coli JJ1886 transcriptional regulator YP_008723942.1 4077378 R 1355100 CDS YP_008723943.1 556553447 17432793 4078427..4079425 1 NC_022648.1 NAD(P)H-dependent; catalyzes the reduction of 2,3-diketo-L-gulonate to 3-keto-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-diketo-L-gulonate reductase 4079425 17432793 P423_19890 Escherichia coli JJ1886 2,3-diketo-L-gulonate reductase YP_008723943.1 4078427 D 1355100 CDS YP_008723944.1 556553448 17432794 4079437..4079901 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4079901 17432794 P423_19895 Escherichia coli JJ1886 hypothetical protein YP_008723944.1 4079437 D 1355100 CDS YP_008723945.1 556554882 17432795 4079924..4080844 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4080844 17432795 P423_19900 Escherichia coli JJ1886 hypothetical protein YP_008723945.1 4079924 D 1355100 CDS YP_008723946.1 556553449 17432796 4080958..4081425 1 NC_022648.1 membrane-spanning protein involved in uptake of 2,3-diketo-L-gulonate; part of the tri-partite ATP-independent periplasmic transport system (TRAP) YiaMNO; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2,3-diketo-L-gulonate TRAP transporter permease 4081425 17432796 P423_19905 Escherichia coli JJ1886 2,3-diketo-L-gulonate TRAP transporter permease YP_008723946.1 4080958 D 1355100 CDS YP_008723947.1 556553450 17432797 4081428..4082705 1 NC_022648.1 TRAP family transporter; with YiaMO is involved in the uptake of L-dehydroascorbate; Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydroascorbate transporter 4082705 17432797 P423_19910 Escherichia coli JJ1886 dehydroascorbate transporter YP_008723947.1 4081428 D 1355100 CDS YP_008723948.1 556553451 17432798 4082718..4083704 1 NC_022648.1 involved in the transport of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter substrate-binding protein 4083704 17432798 P423_19915 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter substrate-binding protein YP_008723948.1 4082718 D 1355100 CDS YP_008723949.1 556553452 17432799 4083708..4085204 1 NC_022648.1 catalyzes the formation of L-xylulose 5-phosphate and 3-dehydro-L-gulonate 6-phosphate from L-xylulose or 3-dehydro-L-gulonate, respectively; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-xylulose/3-keto-L-gulonate kinase 4085204 17432799 P423_19920 Escherichia coli JJ1886 L-xylulose/3-keto-L-gulonate kinase YP_008723949.1 4083708 D 1355100 CDS YP_008723950.1 556553453 17432800 4085201..4085863 1 NC_022648.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-keto-L-gulonate-6-phosphate decarboxylase 4085863 ulaD 17432800 ulaD Escherichia coli JJ1886 3-keto-L-gulonate-6-phosphate decarboxylase YP_008723950.1 4085201 D 1355100 CDS YP_008723951.1 556553454 17432801 4085856..4086716 1 NC_022648.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-xylulose 5-phosphate 3-epimerase 4086716 17432801 P423_19930 Escherichia coli JJ1886 L-xylulose 5-phosphate 3-epimerase YP_008723951.1 4085856 D 1355100 CDS YP_008723952.1 556553455 17432802 4086710..4087405 1 NC_022648.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ribulose-5-phosphate 4-epimerase 4087405 araD 17432802 araD Escherichia coli JJ1886 L-ribulose-5-phosphate 4-epimerase YP_008723952.1 4086710 D 1355100 CDS YP_008723953.1 556553456 17432803 complement(4087437..4088252) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4088252 17432803 P423_19940 Escherichia coli JJ1886 transcriptional regulator YP_008723953.1 4087437 R 1355100 CDS YP_008723954.1 556553457 17432804 4088478..4089878 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 4089878 17432804 P423_19945 Escherichia coli JJ1886 permease YP_008723954.1 4088478 D 1355100 CDS YP_008723955.1 556553458 17432806 complement(4092039..4093577) 1 NC_022648.1 catalyzes the oxidation of acetaldehyde, benzaldehyde, propionaldehyde and other aldehydes; Derived by automated computational analysis using gene prediction method: Protein Homology.; aldehyde dehydrogenase 4093577 17432806 P423_19955 Escherichia coli JJ1886 aldehyde dehydrogenase YP_008723955.1 4092039 R 1355100 CDS YP_008723956.1 556553459 17432807 complement(4093685..4094980) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Fic family protein 4094980 17432807 P423_19960 Escherichia coli JJ1886 Fic family protein YP_008723956.1 4093685 R 1355100 CDS YP_008723957.1 556553460 17432808 complement(4095110..4096261) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 4096261 17432808 P423_19965 Escherichia coli JJ1886 alcohol dehydrogenase YP_008723957.1 4095110 R 1355100 CDS YP_008723958.1 556553461 17432809 complement(4096452..4098296) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; translation elongation factor 4098296 17432809 P423_19970 Escherichia coli JJ1886 translation elongation factor YP_008723958.1 4096452 R 1355100 CDS YP_008723959.1 556553462 17432810 complement(4098293..4099684) 1 NC_022648.1 catalyzes the formation of selenocysteinyl-tRNA(Sec) from seryl-tRNA(Sec) and L-selenophosphate in selenoprotein biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; selenocysteine synthase 4099684 17432810 P423_19975 Escherichia coli JJ1886 selenocysteine synthase YP_008723959.1 4098293 R 1355100 CDS YP_008723960.1 556553463 17432811 complement(4099782..4100390) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutathione S-transferase 4100390 17432811 P423_19980 Escherichia coli JJ1886 glutathione S-transferase YP_008723960.1 4099782 R 1355100 CDS YP_008723961.1 556553464 17432812 complement(4100461..4101597) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4101597 17432812 P423_19985 Escherichia coli JJ1886 membrane protein YP_008723961.1 4100461 R 1355100 CDS YP_008723962.1 556553465 17432813 complement(4101600..4101962) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4101962 17432813 P423_19990 Escherichia coli JJ1886 hypothetical protein YP_008723962.1 4101600 R 1355100 CDS YP_008723963.1 556553466 17432814 4102499..4104412 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; subunit IIC forms the translocation channel and contains the specific substrate-binding site; subunit IIA is phosphorylated and transfers the phosphoryl group to the IIB subunit; subunit IIB transfers the phosphoryl group to the substrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIABC 4104412 17432814 P423_19995 Escherichia coli JJ1886 PTS mannitol transporter subunit IIABC YP_008723963.1 4102499 D 1355100 CDS YP_008723964.1 556553467 17432815 4104732..4105880 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mannitol-1-phosphate 5-dehydrogenase 4105880 17432815 P423_20000 Escherichia coli JJ1886 mannitol-1-phosphate 5-dehydrogenase YP_008723964.1 4104732 D 1355100 CDS YP_008723965.1 556553468 17432816 4105880..4106467 1 NC_022648.1 Acts as a repressor of the mtlAD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannitol repressor protein 4106467 mtlR 17432816 mtlR Escherichia coli JJ1886 mannitol repressor protein YP_008723965.1 4105880 D 1355100 CDS YP_008723966.1 556553469 17432817 complement(4106478..4106687) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4106687 17432817 P423_20010 Escherichia coli JJ1886 hypothetical protein YP_008723966.1 4106478 R 1355100 CDS YP_008723967.1 556553470 17432818 4106971..4107333 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4107333 17432818 P423_20015 Escherichia coli JJ1886 hypothetical protein YP_008723967.1 4106971 D 1355100 CDS YP_008723968.1 556553471 17432819 4107877..4108557 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4108557 17432819 P423_20020 Escherichia coli JJ1886 membrane protein YP_008723968.1 4107877 D 1355100 CDS YP_008723969.1 556554883 17432820 4108601..4112944 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; adhesin 4112944 17432820 P423_20025 Escherichia coli JJ1886 adhesin YP_008723969.1 4108601 D 1355100 CDS YP_008723970.1 556553472 17432821 4113362..4115017 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate permease 4115017 17432821 P423_20030 Escherichia coli JJ1886 L-lactate permease YP_008723970.1 4113362 D 1355100 CDS YP_008723971.1 556553473 17432822 4115017..4115793 1 NC_022648.1 represses the lctPRD operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4115793 17432822 P423_20035 Escherichia coli JJ1886 transcriptional regulator YP_008723971.1 4115017 D 1355100 CDS YP_008723972.1 556553474 17432823 4115790..4116980 1 NC_022648.1 flavin mononucleotide-dependent dehydrogenase; functions in aerobic respiration and also has a role in anaerobic nitrate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-lactate dehydrogenase 4116980 lldD 17432823 lldD Escherichia coli JJ1886 L-lactate dehydrogenase YP_008723972.1 4115790 D 1355100 CDS YP_008723973.1 556553475 17432824 4117028..4117501 1 NC_022648.1 member of the SPOUT superfamily of RNA methyltransferases; Derived by automated computational analysis using gene prediction method: Protein Homology.; rRNA methyltransferase 4117501 17432824 P423_20045 Escherichia coli JJ1886 rRNA methyltransferase YP_008723973.1 4117028 D 1355100 CDS YP_008723974.1 556553476 17432825 complement(4117554..4118375) 1 NC_022648.1 catalyzes the O-acetylation of serine; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine acetyltransferase 4118375 cysE 17432825 cysE Escherichia coli JJ1886 serine acetyltransferase YP_008723974.1 4117554 R 1355100 CDS YP_008723975.1 556553477 17432826 complement(4118455..4119474) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase 4119474 17432826 P423_20055 Escherichia coli JJ1886 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase YP_008723975.1 4118455 R 1355100 CDS YP_008723976.1 556553478 17432827 complement(4119474..4119941) 1 NC_022648.1 molecular chaperone that is required for the normal export of envelope proteins out of the cell cytoplasm; in Escherichia coli this proteins forms a homotetramer in the cytoplasm and delivers proteins to be exported to SecA; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecB 4119941 17432827 P423_20060 Escherichia coli JJ1886 preprotein translocase subunit SecB YP_008723976.1 4119474 R 1355100 CDS YP_008723977.1 556553479 17432828 complement(4120005..4120256) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glutaredoxin 4120256 17432828 P423_20065 Escherichia coli JJ1886 glutaredoxin YP_008723977.1 4120005 R 1355100 CDS YP_008723978.1 556553480 17432829 complement(4120397..4120828) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4120828 17432829 P423_20070 Escherichia coli JJ1886 hypothetical protein YP_008723978.1 4120397 R 1355100 CDS YP_008723979.1 556553481 17432830 4121072..4122616 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglyceromutase 4122616 17432830 P423_20075 Escherichia coli JJ1886 phosphoglyceromutase YP_008723979.1 4121072 D 1355100 CDS YP_008723980.1 556553482 17432831 4122626..4123909 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M37 4123909 17432831 P423_20080 Escherichia coli JJ1886 peptidase M37 YP_008723980.1 4122626 D 1355100 CDS YP_008723981.1 556553483 17432832 4123913..4124872 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4124872 17432832 P423_20085 Escherichia coli JJ1886 hypothetical protein YP_008723981.1 4123913 D 1355100 CDS YP_008723982.1 556553484 17432833 complement(4124859..4125893) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycosyl transferase 4125893 17432833 P423_20090 Escherichia coli JJ1886 glycosyl transferase YP_008723982.1 4124859 R 1355100 CDS YP_008723983.1 556553485 17432834 complement(4126132..4127157) 1 NC_022648.1 converts threonine and NAD to 1,2-amino-3-oxobutanoate and NADH; functions in threonine catabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-threonine 3-dehydrogenase 4127157 tdh 17432834 tdh Escherichia coli JJ1886 L-threonine 3-dehydrogenase YP_008723983.1 4126132 R 1355100 CDS YP_008723984.1 556553486 17432835 complement(4127167..4128363) 1 NC_022648.1 catalyzes the formation of 2-amino-3-oxobutanoate from acetyl-CoA and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-amino-3-ketobutyrate CoA ligase 4128363 17432835 P423_20100 Escherichia coli JJ1886 2-amino-3-ketobutyrate CoA ligase YP_008723984.1 4127167 R 1355100 CDS YP_008723985.1 556553487 17432836 4128577..4129509 1 NC_022648.1 catalyzes the interconversion between ADP-D-glycero-beta-D-manno-heptose and ADP-L-glycero-beta-D-manno-heptose; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-L-glycero-D-mannoheptose-6-epimerase 4129509 rfaD 17432836 rfaD Escherichia coli JJ1886 ADP-L-glycero-D-mannoheptose-6-epimerase YP_008723985.1 4128577 D 1355100 CDS YP_008723986.1 556553488 17432837 4129519..4130565 1 NC_022648.1 catalyzes the transfer of the second heptose to the heptosyl-KDO2 moiety of the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-heptose:LPS heptosyl transferase 4130565 17432837 P423_20110 Escherichia coli JJ1886 ADP-heptose:LPS heptosyl transferase YP_008723986.1 4129519 D 1355100 CDS YP_008723987.1 556553489 17432838 4130569..4131528 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-heptose:LPS heptosyl transferase 4131528 17432838 P423_20115 Escherichia coli JJ1886 ADP-heptose:LPS heptosyl transferase YP_008723987.1 4130569 D 1355100 CDS YP_008723988.1 556554884 17432839 4131538..4132803 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ligase 4132803 17432839 P423_20120 Escherichia coli JJ1886 ligase YP_008723988.1 4131538 D 1355100 CDS YP_008723989.1 556554885 17432840 complement(4132829..4133902) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lipopolysaccharide 1,2-N-acetylglucosaminetransferase 4133902 17432840 P423_20125 Escherichia coli JJ1886 lipopolysaccharide 1,2-N-acetylglucosaminetransferase YP_008723989.1 4132829 R 1355100 CDS YP_008723990.1 556553490 17432841 complement(4133935..4134786) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core biosynthesis protein 4134786 17432841 P423_20130 Escherichia coli JJ1886 lipopolysaccharide core biosynthesis protein YP_008723990.1 4133935 R 1355100 CDS YP_008723991.1 556553491 17432842 complement(4134856..4135554) 1 NC_022648.1 catalyzes the phosphorylation of heptose(II) of the outer membrane lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptose(II) kinase RfaY 4135554 17432842 P423_20135 Escherichia coli JJ1886 lipopolysaccharide core heptose(II) kinase RfaY YP_008723991.1 4134856 R 1355100 CDS YP_008723992.1 556553492 17432843 complement(4135572..4136588) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide 1,3-galactosyltransferase 4136588 17432843 P423_20140 Escherichia coli JJ1886 lipopolysaccharide 1,3-galactosyltransferase YP_008723992.1 4135572 R 1355100 CDS YP_008723993.1 556553493 17432844 complement(4136628..4137647) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide 1,3-galactosyltransferase 4137647 17432844 P423_20145 Escherichia coli JJ1886 lipopolysaccharide 1,3-galactosyltransferase YP_008723993.1 4136628 R 1355100 CDS YP_008723994.1 556553494 17432845 complement(4137647..4138726) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase 4138726 17432845 P423_20150 Escherichia coli JJ1886 UDP-D-galactose:(glucosyl)lipopolysaccharide-1, 6-D-galactosyltransferase YP_008723994.1 4137647 R 1355100 CDS YP_008723995.1 556553495 17432846 complement(4138770..4139705) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide biosynthesis protein 4139705 17432846 P423_20155 Escherichia coli JJ1886 lipopolysaccharide biosynthesis protein YP_008723995.1 4138770 R 1355100 CDS YP_008723996.1 556553496 17432847 complement(4139742..4140539) 1 NC_022648.1 catalyzes the phosphorylation of heptose I in the lipopolysaccharide core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptose(I) kinase RfaP 4140539 17432847 P423_20160 Escherichia coli JJ1886 lipopolysaccharide core heptose(I) kinase RfaP YP_008723996.1 4139742 R 1355100 CDS YP_008723997.1 556553497 17432848 complement(4140532..4141656) 1 NC_022648.1 catalyzes the addition of the first glucose residue to the LPS core; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosyltransferase 4141656 17432848 P423_20165 Escherichia coli JJ1886 glucosyltransferase YP_008723997.1 4140532 R 1355100 CDS YP_008723998.1 556553498 17432849 complement(4141653..4142711) 1 NC_022648.1 catalyzes the transfer of heptose(III) to heptose(II) in the lipopolysaccharide inner core; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide core heptosyltransferase RfaQ 4142711 17432849 P423_20170 Escherichia coli JJ1886 lipopolysaccharide core heptosyltransferase RfaQ YP_008723998.1 4141653 R 1355100 CDS YP_008723999.1 556553499 17432850 4143125..4144402 1 NC_022648.1 catalyzes the transfer of 2-keto-3-deoxy-D-manno-octulosonic acid to lipid A; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-deoxy-D-manno-octulosonic acid transferase 4144402 17432850 P423_20175 Escherichia coli JJ1886 3-deoxy-D-manno-octulosonic acid transferase YP_008723999.1 4143125 D 1355100 CDS YP_008724000.1 556553500 17432851 4144410..4144889 1 NC_022648.1 Catalyzes the conversion of ATP and pantetheine 4'-phosphate to diphosphate and 3'-dephospho-coA; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopantetheine adenylyltransferase 4144889 coaD 17432851 coaD Escherichia coli JJ1886 phosphopantetheine adenylyltransferase YP_008724000.1 4144410 D 1355100 CDS YP_008724001.1 556553501 17432852 complement(4144928..4145737) 1 NC_022648.1 Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-hydroxymethyluracil DNA glycosylase 4145737 17432852 P423_20185 Escherichia coli JJ1886 5-hydroxymethyluracil DNA glycosylase YP_008724001.1 4144928 R 1355100 CDS YP_008724002.1 556553502 17432853 complement(4145835..4146002) 1 NC_022648.1 in Escherichia coli BM108, a mutation that results in lack of L33 synthesis had no effect on ribosome synthesis or function; there are paralogous genes in several bacterial genomes, and a CXXC motif for zinc binding and an upstream regulation region of the paralog lacking this motif that are regulated by zinc similar to other ribosomal proteins like L31; the proteins in this group lack the CXXC motif; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L33 4146002 rpmG 17432853 rpmG Escherichia coli JJ1886 50S ribosomal protein L33 YP_008724002.1 4145835 R 1355100 CDS YP_008724003.1 556553503 17432854 complement(4146023..4146259) 1 NC_022648.1 required for 70S ribosome assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L28 4146259 rpmB 17432854 rpmB Escherichia coli JJ1886 50S ribosomal protein L28 YP_008724003.1 4146023 R 1355100 CDS YP_008724004.1 556553504 17432855 complement(4146476..4147144) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4147144 17432855 P423_20205 Escherichia coli JJ1886 hypothetical protein YP_008724004.1 4146476 R 1355100 CDS YP_008724005.1 556553505 17432856 4147316..4148536 1 NC_022648.1 catalyzes the conjugation of cysteine to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, which is then decarboxylated to form 4'-phosphopantotheine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopantothenoylcysteine decarboxylase 4148536 17432856 P423_20210 Escherichia coli JJ1886 phosphopantothenoylcysteine decarboxylase YP_008724005.1 4147316 D 1355100 CDS YP_008724006.1 556553506 17432857 4148514..4148972 1 NC_022648.1 catalyzes the formation of dUMP from dUTP; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyuridine 5'-triphosphate nucleotidohydrolase 4148972 17432857 P423_20215 Escherichia coli JJ1886 deoxyuridine 5'-triphosphate nucleotidohydrolase YP_008724006.1 4148514 D 1355100 CDS YP_008724007.1 556553507 17432858 4149079..4149675 1 NC_022648.1 FtsZ binding protein; synthetically lethal with a defect in the Min system; this protein is the first identified nucleoid occlusion factor which works along with the Min system to properly position the FtsZ ring assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; division inhibitor protein 4149675 slmA 17432858 slmA Escherichia coli JJ1886 division inhibitor protein YP_008724007.1 4149079 D 1355100 CDS YP_008724008.1 556553508 17432859 complement(4149712..4150353) 1 NC_022648.1 involved in fifth step of pyrimidine biosynthesis; converts orotidine 5'-phosphate and diphosphate to orotate and 5-phospho-alpha-D-ribose 1-diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; orotate phosphoribosyltransferase 4150353 pyrE 17432859 pyrE Escherichia coli JJ1886 orotate phosphoribosyltransferase YP_008724008.1 4149712 R 1355100 CDS YP_008724009.1 556553509 17432860 complement(4150419..4151135) 1 NC_022648.1 RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease PH 4151135 rph 17432860 rph Escherichia coli JJ1886 ribonuclease PH YP_008724009.1 4150419 R 1355100 CDS YP_008724010.1 556553510 17432861 4151262..4152125 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4152125 17432861 P423_20235 Escherichia coli JJ1886 hypothetical protein YP_008724010.1 4151262 D 1355100 CDS YP_008724011.1 556553511 17432862 4152377..4152994 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4152994 17432862 P423_20240 Escherichia coli JJ1886 membrane protein YP_008724011.1 4152377 D 1355100 CDS YP_008724012.1 556553512 17432863 complement(4152991..4154673) 1 NC_022648.1 this ligase is similar to LigA but it lacks the C-terminal BRCT domain; catalyzes strand joining of nicked DNA in the presence of a divalent cation and NAD+; Derived by automated computational analysis using gene prediction method: Protein Homology.; NAD-dependent DNA ligase LigB 4154673 ligB 17432863 ligB Escherichia coli JJ1886 NAD-dependent DNA ligase LigB YP_008724012.1 4152991 R 1355100 CDS YP_008724013.1 556553513 17432864 4154931..4155554 1 NC_022648.1 Essential for recycling GMP and indirectly, cGMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanylate kinase 4155554 gmk 17432864 gmk Escherichia coli JJ1886 guanylate kinase YP_008724013.1 4154931 D 1355100 CDS YP_008724014.1 556553514 17432865 4155609..4155884 1 NC_022648.1 Promotes RNA polymerase assembly; latches the N- and C-terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit omega 4155884 rpoZ 17432865 rpoZ Escherichia coli JJ1886 DNA-directed RNA polymerase subunit omega YP_008724014.1 4155609 D 1355100 CDS YP_008724015.1 556553515 17432866 4155903..4158011 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase 4158011 17432866 P423_20260 Escherichia coli JJ1886 bifunctional (p)ppGpp synthetase II/ guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase YP_008724015.1 4155903 D 1355100 CDS YP_008724016.1 556553516 17432867 4158018..4158707 1 NC_022648.1 specifically modifies tRNA at position G18; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA methyltransferase 4158707 17432867 P423_20265 Escherichia coli JJ1886 tRNA methyltransferase YP_008724016.1 4158018 D 1355100 CDS YP_008724017.1 556553517 17432868 4158713..4160794 1 NC_022648.1 catalyzes branch migration in Holliday junction intermediates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase RecG 4160794 17432868 P423_20270 Escherichia coli JJ1886 ATP-dependent DNA helicase RecG YP_008724017.1 4158713 D 1355100 CDS YP_008724018.1 556553518 17432869 complement(4160828..4162033) 1 NC_022648.1 is involved with the sodium-dependent uptake of glutamate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium/glutamate symport carrier protein GltS 4162033 17432869 P423_20275 Escherichia coli JJ1886 sodium/glutamate symport carrier protein GltS YP_008724018.1 4160828 R 1355100 CDS YP_008724019.1 556553519 17432870 4162313..4163704 1 NC_022648.1 high-affinity transporter for xanthine; Derived by automated computational analysis using gene prediction method: Protein Homology.; xanthine permease 4163704 17432870 P423_20280 Escherichia coli JJ1886 xanthine permease YP_008724019.1 4162313 D 1355100 CDS YP_008724020.1 556553520 17432871 4163825..4165534 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4165534 17432871 P423_20285 Escherichia coli JJ1886 hypothetical protein YP_008724020.1 4163825 D 1355100 CDS YP_008724021.1 556553521 17432872 complement(4165578..4166258) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4166258 17432872 P423_20290 Escherichia coli JJ1886 hypothetical protein YP_008724021.1 4165578 R 1355100 CDS YP_008724022.1 556553522 17432873 complement(4166239..4167171) 1 NC_022648.1 catalyzes phosphorylation of fructose; cytosolic enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructokinase 4167171 17432873 P423_20295 Escherichia coli JJ1886 fructokinase YP_008724022.1 4166239 R 1355100 CDS YP_008724023.1 556553523 17432874 complement(4167219..4168079) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4168079 17432874 P423_20300 Escherichia coli JJ1886 hypothetical protein YP_008724023.1 4167219 R 1355100 CDS YP_008724024.1 556553524 17432875 complement(4168160..4169011) 1 NC_022648.1 catalyzes the reversible reaction of dihydroxyacetone phosphate with glyceraldehyde 3-phosphate to produce tagatose 1,6-bisphosphate; in enteric bacteria there are two D-tagatose 1,6-bisphosphate-specific aldolases: KbaY (also called AgaY), involved in catabolism of N-acetyl-galactosamine and D-galactosamine, and GatY which is part of the galactitol catabolism pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; tagatose-bisphosphate aldolase 4169011 kbaY 17432875 kbaY Escherichia coli JJ1886 tagatose-bisphosphate aldolase YP_008724024.1 4168160 R 1355100 CDS YP_008724025.1 556554886 17432877 complement(4170471..4170941) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; FrvA 4170941 17432877 P423_20315 Escherichia coli JJ1886 FrvA YP_008724025.1 4170471 R 1355100 CDS YP_008724026.1 556554887 17432878 complement(4170968..4172521) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; LicR 4172521 17432878 P423_20320 Escherichia coli JJ1886 LicR YP_008724026.1 4170968 R 1355100 CDS YP_008724027.1 556553525 17432879 complement(4172816..4175134) 1 NC_022648.1 catalyzes the transfer of alpha-xylosyl residue; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-glucosidase 4175134 17432879 P423_20325 Escherichia coli JJ1886 alpha-glucosidase YP_008724027.1 4172816 R 1355100 CDS YP_008724028.1 556553526 17432880 complement(4175144..4176526) 1 NC_022648.1 may be involved in the transport of galactosides-pentoses-hexuronides; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4176526 17432880 P423_20330 Escherichia coli JJ1886 transporter YP_008724028.1 4175144 R 1355100 CDS YP_008724029.1 556554888 17432882 4177011..4178003 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 2-hydroxyacid dehydrogenase 4178003 17432882 P423_20340 Escherichia coli JJ1886 2-hydroxyacid dehydrogenase YP_008724029.1 4177011 D 1355100 CDS YP_008724030.1 556554889 17432883 4178573..4179070 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4179070 17432883 P423_20345 Escherichia coli JJ1886 hypothetical protein YP_008724030.1 4178573 D 1355100 CDS YP_008724031.1 556553527 17432884 4179248..4180171 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4180171 17432884 P423_20350 Escherichia coli JJ1886 membrane protein YP_008724031.1 4179248 D 1355100 CDS YP_008724032.1 556553528 17432885 complement(4180175..4180993) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine ABC transporter substrate-binding protein 4180993 metQ 17432885 metQ Escherichia coli JJ1886 methionine ABC transporter substrate-binding protein YP_008724032.1 4180175 R 1355100 CDS YP_008724033.1 556553529 17432886 4181215..4181508 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4181508 17432886 P423_20360 Escherichia coli JJ1886 hypothetical protein YP_008724033.1 4181215 D 1355100 CDS YP_008724034.1 556553530 17432887 complement(4181549..4182739) 1 NC_022648.1 experimental results in Escherichia coli suggest that this gene encodes an inosine export protein; member of major facilitator superfamily; MFS; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside transporter 4182739 nepI 17432887 nepI Escherichia coli JJ1886 ribonucleoside transporter YP_008724034.1 4181549 R 1355100 CDS YP_008724035.1 556553531 17432888 4182967..4183326 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4183326 17432888 P423_20370 Escherichia coli JJ1886 hypothetical protein YP_008724035.1 4182967 D 1355100 CDS YP_008724036.1 556553532 17432889 4183310..4183633 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-binding protein 4183633 17432889 P423_20375 Escherichia coli JJ1886 DNA-binding protein YP_008724036.1 4183310 D 1355100 CDS YP_008724037.1 556553533 17432890 complement(4183749..4184201) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4184201 17432890 P423_20380 Escherichia coli JJ1886 hypothetical protein YP_008724037.1 4183749 R 1355100 CDS YP_008724038.1 556553534 17432891 complement(4184254..4185600) 1 NC_022648.1 involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine permease 4185600 17432891 P423_20385 Escherichia coli JJ1886 adenine permease YP_008724038.1 4184254 R 1355100 CDS YP_008724039.1 556553535 17432892 4185763..4187529 1 NC_022648.1 catalyzes the formation of hypoxanthine from adenine; in E. coli this activity has been detected in mutant strains but not in wild type; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine deaminase 4187529 17432892 P423_20390 Escherichia coli JJ1886 adenine deaminase YP_008724039.1 4185763 D 1355100 CDS YP_008724040.1 556553536 17432893 complement(4187576..4188967) 1 NC_022648.1 cytoplasmic membrane protein that functions as a monomer; catalyzes the active transport of sugar-phosphates such as glucose-6-phosphate with the obligatory exchange of inorganic phosphate or organophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; antiporter 4188967 uhpT 17432893 uhpT Escherichia coli JJ1886 antiporter YP_008724040.1 4187576 R 1355100 CDS YP_008724041.1 556553537 17432894 complement(4189105..4190424) 1 NC_022648.1 membrane protein regulates uhpT expression; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory protein 4190424 17432894 P423_20400 Escherichia coli JJ1886 regulatory protein YP_008724041.1 4189105 R 1355100 CDS YP_008724042.1 556553538 17432895 complement(4190434..4191936) 1 NC_022648.1 Member of the two-component regulatory system UhpB/UhpA involved in the regulation of the uptake of hexose ph; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 4191936 17432895 P423_20405 Escherichia coli JJ1886 sensory histidine kinase YP_008724042.1 4190434 R 1355100 CDS YP_008724043.1 556553539 17432896 complement(4191936..4192526) 1 NC_022648.1 response regulator in two-component regulatory system wtih UhpB; phosphorylated UhpA is a positive activator uhpT, a hexose phosphates transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4192526 17432896 P423_20410 Escherichia coli JJ1886 transcriptional regulator YP_008724043.1 4191936 R 1355100 CDS YP_008724044.1 556554890 17432897 4193010..4193498 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4193498 17432897 P423_20415 Escherichia coli JJ1886 hypothetical protein YP_008724044.1 4193010 D 1355100 CDS YP_008724045.1 556554891 17432898 4193739..4193870 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4193870 17432898 P423_20420 Escherichia coli JJ1886 hypothetical protein YP_008724045.1 4193739 D 1355100 CDS YP_008724046.1 556553540 17432899 complement(4193936..4194226) 1 NC_022648.1 with IlvB catalyzes the formation of 2-acetolactate from pyruvate, the small subunit is required for full activity and valine sensitivity; E.coli produces 3 isoenzymes of acetolactate synthase which differ in specificity to substrates, valine sensitivity and affinity for cofactors; also known as acetolactate synthase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4194226 17432899 P423_20425 Escherichia coli JJ1886 acetolactate synthase YP_008724046.1 4193936 R 1355100 CDS YP_008724047.1 556553541 17432900 complement(4194230..4195918) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4195918 17432900 P423_20430 Escherichia coli JJ1886 acetolactate synthase YP_008724047.1 4194230 R 1355100 CDS YP_008724048.1 556553542 17432901 4196523..4197707 1 NC_022648.1 multidrug efflux protein involved in adaptation to low energy shock; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein D 4197707 emrD 17432901 emrD Escherichia coli JJ1886 multidrug resistance protein D YP_008724048.1 4196523 D 1355100 CDS YP_008724049.1 556553543 17432902 complement(4197715..4198212) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4198212 17432902 P423_20440 Escherichia coli JJ1886 hypothetical protein YP_008724049.1 4197715 R 1355100 CDS YP_008724050.1 556553544 17432903 complement(4198209..4198571) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4198571 17432903 P423_20445 Escherichia coli JJ1886 membrane protein YP_008724050.1 4198209 R 1355100 CDS YP_008724051.1 556553545 17432904 complement(4198561..4198908) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4198908 17432904 P423_20450 Escherichia coli JJ1886 membrane protein YP_008724051.1 4198561 R 1355100 CDS YP_008724052.1 556553546 17432906 complement(4200459..4202174) 1 NC_022648.1 uncharacterized member of the SSS superfamily of sodium-dependent solute transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4202174 17432906 P423_20460 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008724052.1 4200459 R 1355100 CDS YP_008724053.1 556553547 17432907 4202341..4203207 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4203207 17432907 P423_20465 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008724053.1 4202341 D 1355100 CDS YP_008724054.1 556553548 17432908 complement(4203297..4204958) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4204958 17432908 P423_20470 Escherichia coli JJ1886 transporter YP_008724054.1 4203297 R 1355100 CDS YP_008724055.1 556553549 17432909 complement(4205156..4205584) 1 NC_022648.1 16 kDa heat shock protein B; associates with aggregated proteins, together with ibpA, to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; ATP-independent; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock chaperone IbpB 4205584 17432909 P423_20475 Escherichia coli JJ1886 heat shock chaperone IbpB YP_008724055.1 4205156 R 1355100 CDS YP_008724056.1 556553550 17432910 complement(4205696..4206109) 1 NC_022648.1 with IbpB associates with aggregated proteins to stabilize and protect them from irreversible denaturation and extensive proteolysis during heat shock and oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; heat shock protein IbpA 4206109 17432910 P423_20480 Escherichia coli JJ1886 heat shock protein IbpA YP_008724056.1 4205696 R 1355100 CDS YP_008724057.1 556553551 17432911 4206415..4206747 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4206747 17432911 P423_20485 Escherichia coli JJ1886 membrane protein YP_008724057.1 4206415 D 1355100 CDS YP_008724058.1 556553552 17432912 complement(4206751..4207998) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4207998 17432912 P423_20490 Escherichia coli JJ1886 hypothetical protein YP_008724058.1 4206751 R 1355100 CDS YP_008724059.1 556553553 17432913 4208048..4209166 1 NC_022648.1 FAD/NAD(P)-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 4209166 17432913 P423_20495 Escherichia coli JJ1886 oxidoreductase YP_008724059.1 4208048 D 1355100 CDS YP_008724060.1 556553554 17432914 complement(4209127..4210419) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucarate transporter 4210419 17432914 P423_20500 Escherichia coli JJ1886 glucarate transporter YP_008724060.1 4209127 R 1355100 CDS YP_008724061.1 556553555 17432915 complement(4210539..4211687) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate dehydratase 4211687 17432915 P423_20505 Escherichia coli JJ1886 galactonate dehydratase YP_008724061.1 4210539 R 1355100 CDS YP_008724062.1 556553556 17432916 complement(4211684..4212301) 1 NC_022648.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 4212301 17432916 P423_20510 Escherichia coli JJ1886 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_008724062.1 4211684 R 1355100 CDS YP_008724063.1 556553557 17432917 complement(4212285..4213163) 1 NC_022648.1 catalyzes the formation of 2-dehydro-3-deoxy-D-galactonate 6-phosphate from 2-dehydro-3-deoxy-D-galactonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-oxo-3-deoxygalactonate kinase 4213163 17432917 P423_20515 Escherichia coli JJ1886 2-oxo-3-deoxygalactonate kinase YP_008724063.1 4212285 R 1355100 CDS YP_008724064.1 556553558 17432918 complement(4213160..4213849) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate operon transcriptional repressor 4213849 17432918 P423_20520 Escherichia coli JJ1886 galactonate operon transcriptional repressor YP_008724064.1 4213160 R 1355100 CDS YP_008724065.1 556553559 17432919 4214128..4214784 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4214784 17432919 P423_20525 Escherichia coli JJ1886 hypothetical protein YP_008724065.1 4214128 D 1355100 CDS YP_008724066.1 556553560 17432920 complement(4214828..4215640) 1 NC_022648.1 YidA; catalyzes the dephosphorylation of erythrose 4-phosphate (preferred substrate), mannose 1-phosphate and p-nitrophenyl phosphate; hydrolyzes the alpha-D-glucose-1-phosphate but not the beta form; member of the haloacid dehalogenase-like hydrolases superfamily and Cof family of proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar phosphate phosphatase 4215640 17432920 P423_20530 Escherichia coli JJ1886 sugar phosphate phosphatase YP_008724066.1 4214828 R 1355100 CDS YP_008724067.1 556553561 17432921 complement(4215754..4216152) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4216152 17432921 P423_20535 Escherichia coli JJ1886 hypothetical protein YP_008724067.1 4215754 R 1355100 CDS YP_008724068.1 556553562 17432922 complement(4216296..4218710) 1 NC_022648.1 negatively supercoils closed circular double-stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA gyrase subunit B 4218710 gyrB 17432922 gyrB Escherichia coli JJ1886 DNA gyrase subunit B YP_008724068.1 4216296 R 1355100 CDS YP_008724069.1 556553563 17432923 complement(4218739..4219812) 1 NC_022648.1 Required for DNA replication; binds preferentially to single-stranded, linear DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; recombinase F 4219812 recF 17432923 recF Escherichia coli JJ1886 recombinase F YP_008724069.1 4218739 R 1355100 CDS YP_008724070.1 556553564 17432924 complement(4219812..4220912) 1 NC_022648.1 binds the polymerase to DNA and acts as a sliding clamp; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit beta 4220912 17432924 P423_20550 Escherichia coli JJ1886 DNA polymerase III subunit beta YP_008724070.1 4219812 R 1355100 CDS YP_008724071.1 556553565 17432925 complement(4220917..4222320) 1 NC_022648.1 binds to the dnaA-box as an ATP-bound complex at the origin of replication during the initiation of chromosomal replication; can also affect transcription of multiple genes including itself; Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosomal replication initiation protein 4222320 dnaA 17432925 dnaA Escherichia coli JJ1886 chromosomal replication initiation protein YP_008724071.1 4220917 R 1355100 CDS YP_008724072.1 556553566 17432926 4222927..4223067 1 NC_022648.1 in Escherichia coli transcription of this gene is enhanced by polyamines; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L34 4223067 rpmH 17432926 rpmH Escherichia coli JJ1886 50S ribosomal protein L34 YP_008724072.1 4222927 D 1355100 CDS YP_008724073.1 556553567 17432927 4223084..4223443 1 NC_022648.1 protein component of RNaseP which catalyzes the removal of the 5'-leader sequence from pre-tRNA to produce the mature 5'terminus; this enzyme also cleaves other RNA substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease P 4223443 rnpA 17432927 rnpA Escherichia coli JJ1886 ribonuclease P YP_008724073.1 4223084 D 1355100 CDS YP_008724074.1 556553568 17432928 4223667..4225313 1 NC_022648.1 functions to insert inner membrane proteins into the IM in Escherichia coli; interacts with transmembrane segments; functions in both Sec-dependent and -independent membrane insertion; similar to Oxa1p in mitochondria; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein insertase 4225313 17432928 P423_20570 Escherichia coli JJ1886 membrane protein insertase YP_008724074.1 4223667 D 1355100 CDS YP_008724075.1 556553569 17432929 4225419..4226783 1 NC_022648.1 in Escherichia coli this protein is involved in the biosynthesis of the hypermodified nucleoside 5-methylaminomethyl-2-thiouridine, which is found in the wobble position of some tRNAs and affects ribosomal frameshifting; shows potassium-dependent dimerization and GTP hydrolysis; also involved in regulation of glutamate-dependent acid resistance and activation of gadE; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA modification GTPase TrmE 4226783 trmE 17432929 trmE Escherichia coli JJ1886 tRNA modification GTPase TrmE YP_008724075.1 4225419 D 1355100 CDS YP_008724076.1 556553570 17432930 4227320..4228735 1 NC_022648.1 tryptophan indole-lyase; catalyzes the formation of indole and pyruvate from tryptophan; also has xysteine desulfhydrase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-cysteine desulfhydrase 4228735 tnaA 17432930 tnaA Escherichia coli JJ1886 L-cysteine desulfhydrase YP_008724076.1 4227320 D 1355100 CDS YP_008724077.1 556553571 17432931 4228827..4230074 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tryptophan permease 4230074 17432931 P423_20585 Escherichia coli JJ1886 tryptophan permease YP_008724077.1 4228827 D 1355100 CDS YP_008724078.1 556553572 17432932 4230206..4231381 1 NC_022648.1 Confers resistance to chloramphenicol; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 4231381 17432932 P423_20590 Escherichia coli JJ1886 multidrug transporter YP_008724078.1 4230206 D 1355100 CDS YP_008724079.1 556553573 17432933 4231356..4232315 1 NC_022648.1 Involved in anaerobic NO protection; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4232315 17432933 P423_20595 Escherichia coli JJ1886 transcriptional regulator YP_008724079.1 4231356 D 1355100 CDS YP_008724080.1 556553574 17432934 4232472..4233221 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4233221 17432934 P423_20600 Escherichia coli JJ1886 hypothetical protein YP_008724080.1 4232472 D 1355100 CDS YP_008724081.1 556553575 17432935 4233243..4233809 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4233809 17432935 P423_20605 Escherichia coli JJ1886 hypothetical protein YP_008724081.1 4233243 D 1355100 CDS YP_008724082.1 556553576 17432936 complement(4233862..4235199) 1 NC_022648.1 involved in the transport or adenine; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenine permease 4235199 17432936 P423_20610 Escherichia coli JJ1886 adenine permease YP_008724082.1 4233862 R 1355100 CDS YP_008724083.1 556553577 17432937 4235366..4236031 1 NC_022648.1 YieH; catalyzes the dephosphorylation of phosphoenolpyruvate, AMP and p-nitrophenyl phosphate; purine and pyrimidine nucleotides are secondary substrates; member of the haloacid dehalogenase-like hydrolases superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconate phosphatase 4236031 17432937 P423_20615 Escherichia coli JJ1886 6-phosphogluconate phosphatase YP_008724083.1 4235366 D 1355100 CDS YP_008724084.1 556553578 17432938 4236098..4236565 1 NC_022648.1 might be involved in hypersensitivity to nitrofurzone; Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4236565 17432938 P423_20620 Escherichia coli JJ1886 membrane protein YP_008724084.1 4236098 D 1355100 CDS YP_008724085.1 556553579 17432939 4236614..4237201 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4237201 17432939 P423_20625 Escherichia coli JJ1886 hypothetical protein YP_008724085.1 4236614 D 1355100 CDS YP_008724086.1 556553580 17432940 complement(4237262..4237984) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphogluconolactonase 4237984 17432940 P423_20630 Escherichia coli JJ1886 6-phosphogluconolactonase YP_008724086.1 4237262 R 1355100 CDS YP_008724087.1 556553581 17432941 complement(4237999..4239168) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4239168 17432941 P423_20635 Escherichia coli JJ1886 hypothetical protein YP_008724087.1 4237999 R 1355100 CDS YP_008724088.1 556553582 17432942 complement(4239195..4240811) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; porin 4240811 17432942 P423_20640 Escherichia coli JJ1886 porin YP_008724088.1 4239195 R 1355100 CDS YP_008724089.1 556553583 17432943 complement(4240897..4242291) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phospho-beta-glucosidase 4242291 17432943 P423_20645 Escherichia coli JJ1886 6-phospho-beta-glucosidase YP_008724089.1 4240897 R 1355100 CDS YP_008724090.1 556553584 17432944 complement(4242310..4244121) 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIA 4244121 17432944 P423_20650 Escherichia coli JJ1886 PTS glucose transporter subunit IIA YP_008724090.1 4242310 R 1355100 CDS YP_008724091.1 556553585 17432946 complement(4245439..4246164) 1 NC_022648.1 regulates several genes involved in high affinity phosphate uptake; under conditions of high phosphate concentrations downregulates the PHO regulon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4246164 17432946 P423_20660 Escherichia coli JJ1886 transcriptional regulator YP_008724091.1 4245439 R 1355100 CDS YP_008724092.1 556554892 17432947 complement(4246179..4246952) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphate ABC transporter ATP-binding protein 4246952 17432947 P423_20665 Escherichia coli JJ1886 phosphate ABC transporter ATP-binding protein YP_008724092.1 4246179 R 1355100 CDS YP_008724093.1 556553586 17432948 complement(4247043..4247933) 1 NC_022648.1 Part of the ABC transporter complex PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter permease subunit PtsA 4247933 pstA 17432948 pstA Escherichia coli JJ1886 phosphate transporter permease subunit PtsA YP_008724093.1 4247043 R 1355100 CDS YP_008724094.1 556553587 17432949 complement(4247933..4248892) 1 NC_022648.1 part of the ATP-dependent phosphate uptake system PstABCS responsible for inorganic phosphate (Pi) uptake under Pi starvation conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate transporter permease subunit PstC 4248892 pstC 17432949 pstC Escherichia coli JJ1886 phosphate transporter permease subunit PstC YP_008724094.1 4247933 R 1355100 CDS YP_008724095.1 556553588 17432950 complement(4248978..4250018) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate ABC transporter substrate-binding protein 4250018 17432950 P423_20680 Escherichia coli JJ1886 phosphate ABC transporter substrate-binding protein YP_008724095.1 4248978 R 1355100 CDS YP_008724096.1 556553589 17432951 complement(4250332..4252161) 1 NC_022648.1 Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucosamine--fructose-6-phosphate aminotransferase 4252161 17432951 P423_20685 Escherichia coli JJ1886 glucosamine--fructose-6-phosphate aminotransferase YP_008724096.1 4250332 R 1355100 CDS YP_008724097.1 556553590 17432952 complement(4252323..4253693) 1 NC_022648.1 forms a homotrimer; catalyzes the acetylation of glucosamine-1-phosphate and uridylation of N-acetylglucosamine-1-phosphate to produce UDP-GlcNAc; function in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase 4253693 glmU 17432952 glmU Escherichia coli JJ1886 bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase YP_008724097.1 4252323 R 1355100 CDS YP_008724098.1 556554893 17432953 complement(4253748..4253834) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4253834 17432953 P423_20695 Escherichia coli JJ1886 hypothetical protein YP_008724098.1 4253748 R 1355100 CDS YP_008724099.1 556553591 17432954 complement(4254047..4254466) 1 NC_022648.1 part of catalytic core of ATP synthase; alpha(3)beta(3)gamma(1)delta(1)epsilon(1); involved in producing ATP from ADP in the presence of the proton motive force across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit epsilon 4254466 atpC 17432954 atpC Escherichia coli JJ1886 F0F1 ATP synthase subunit epsilon YP_008724099.1 4254047 R 1355100 CDS YP_008724100.1 556553592 17432955 complement(4254487..4255869) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit beta 4255869 17432955 P423_20705 Escherichia coli JJ1886 F0F1 ATP synthase subunit beta YP_008724100.1 4254487 R 1355100 CDS YP_008724101.1 556553593 17432956 complement(4255896..4256759) 1 NC_022648.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is a regulatory subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit gamma 4256759 17432956 P423_20710 Escherichia coli JJ1886 F0F1 ATP synthase subunit gamma YP_008724101.1 4255896 R 1355100 CDS YP_008724102.1 556553594 17432957 complement(4256810..4258351) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit alpha 4258351 17432957 P423_20715 Escherichia coli JJ1886 F0F1 ATP synthase subunit alpha YP_008724102.1 4256810 R 1355100 CDS YP_008724103.1 556553595 17432958 complement(4258364..4258897) 1 NC_022648.1 Produces ATP from ADP in the presence of a proton gradient across the membrane; the delta subunit is part of the catalytic core of the ATP synthase complex; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit delta 4258897 17432958 P423_20720 Escherichia coli JJ1886 F0F1 ATP synthase subunit delta YP_008724103.1 4258364 R 1355100 CDS YP_008724104.1 556553596 17432959 complement(4258912..4259382) 1 NC_022648.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit B is part of the membrane proton channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit B 4259382 17432959 P423_20725 Escherichia coli JJ1886 F0F1 ATP synthase subunit B YP_008724104.1 4258912 R 1355100 CDS YP_008724105.1 556553597 17432960 complement(4259444..4259683) 1 NC_022648.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit C is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit C 4259683 17432960 P423_20730 Escherichia coli JJ1886 F0F1 ATP synthase subunit C YP_008724105.1 4259444 R 1355100 CDS YP_008724106.1 556553598 17432961 complement(4259730..4260545) 1 NC_022648.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit A is part of the membrane proton channel F0; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit A 4260545 17432961 P423_20735 Escherichia coli JJ1886 F0F1 ATP synthase subunit A YP_008724106.1 4259730 R 1355100 CDS YP_008724107.1 556553599 17432962 complement(4260554..4260934) 1 NC_022648.1 Produces ATP from ADP in the presence of a proton gradient across the membrane. Subunit I associates with the membrane and may be involved with cation translocation; Derived by automated computational analysis using gene prediction method: Protein Homology.; F0F1 ATP synthase subunit I 4260934 17432962 P423_20740 Escherichia coli JJ1886 F0F1 ATP synthase subunit I YP_008724107.1 4260554 R 1355100 CDS YP_008724108.1 556553600 17432963 complement(4261551..4262174) 1 NC_022648.1 glucose-inhibited division protein B; SAM-dependent methyltransferase; methylates the N7 position of guanosine in position 527 of 16S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 4262174 gidB 17432963 gidB Escherichia coli JJ1886 16S rRNA methyltransferase YP_008724108.1 4261551 R 1355100 CDS YP_008724109.1 556553601 17432964 complement(4262238..4264127) 1 NC_022648.1 GidA; glucose-inhibited cell division protein A; involved in the 5-carboxymethylaminomethyl modification (mnm(5)s(2)U) of the wobble uridine base in some tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA uridine 5-carboxymethylaminomethyl modification protein 4264127 gidA 17432964 gidA Escherichia coli JJ1886 tRNA uridine 5-carboxymethylaminomethyl modification protein YP_008724109.1 4262238 R 1355100 CDS YP_008724110.1 556553602 17432965 complement(4264506..4264949) 1 NC_022648.1 An electron-transfer protein; flavodoxin binds one FMN molecule, which serves as a redox-active prosthetic group; Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN-binding protein MioC 4264949 17432965 P423_20755 Escherichia coli JJ1886 FMN-binding protein MioC YP_008724110.1 4264506 R 1355100 CDS YP_008724111.1 556553603 17432966 complement(4265039..4265497) 1 NC_022648.1 transcriptional repressor of asnA which codes for aspartate-ammonia ligase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4265497 17432966 P423_20760 Escherichia coli JJ1886 transcriptional regulator YP_008724111.1 4265039 R 1355100 CDS YP_008724112.1 556553604 17432967 4265649..4266641 1 NC_022648.1 catalyzes the formation of asparagine from aspartate and ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; asparagine synthetase AsnA 4266641 17432967 P423_20765 Escherichia coli JJ1886 asparagine synthetase AsnA YP_008724112.1 4265649 D 1355100 CDS YP_008724113.1 556553605 17432968 complement(4266646..4268097) 1 NC_022648.1 contains a von Willibrand factor type A domain; stimulates the ATPase activity of RavA; Derived by automated computational analysis using gene prediction method: Protein Homology.; protoheme IX farnesyltransferase 4268097 yieM 17432968 yieM Escherichia coli JJ1886 protoheme IX farnesyltransferase YP_008724113.1 4266646 R 1355100 CDS YP_008724114.1 556553606 17432969 complement(4268091..4269608) 1 NC_022648.1 interacts with LdcI, lysine decarboxylase; may be active in late log/ early stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; regulatory ATPase RavA 4269608 17432969 P423_20775 Escherichia coli JJ1886 regulatory ATPase RavA YP_008724114.1 4268091 R 1355100 CDS YP_008724115.1 556553607 17432970 4269810..4271678 1 NC_022648.1 Responsible for the low-affinity transport of potassium into the cell; involved in potassium ion uptake under hyper-osmotic stress at a low pH; Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter Kup 4271678 trkD 17432970 trkD Escherichia coli JJ1886 potassium transporter Kup YP_008724115.1 4269810 D 1355100 CDS YP_008724116.1 556553608 17432971 4271833..4272264 1 NC_022648.1 cytoplasmic mutarotase that catalyzes the conversion between beta-pyran and beta-furan forms of D-ribose; RbsD is required for efficient ribose utilization in E. coli; rbsD-mutant E. coli strains are unable to use ribose as a sole carbon source; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose pyranase 4272264 17432971 P423_20785 Escherichia coli JJ1886 D-ribose pyranase YP_008724116.1 4271833 D 1355100 CDS YP_008724117.1 556553609 17432972 4272272..4273777 1 NC_022648.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter ATP binding protein 4273777 17432972 P423_20790 Escherichia coli JJ1886 D-ribose transporter ATP binding protein YP_008724117.1 4272272 D 1355100 CDS YP_008724118.1 556553610 17432973 4273782..4274747 1 NC_022648.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose ABC transporter permease 4274747 rbsC 17432973 rbsC Escherichia coli JJ1886 ribose ABC transporter permease YP_008724118.1 4273782 D 1355100 CDS YP_008724119.1 556553611 17432974 4274772..4275662 1 NC_022648.1 periplasmic substrate-binding component of the ATP-dependent ribose transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter subunit RbsB 4275662 17432974 P423_20800 Escherichia coli JJ1886 D-ribose transporter subunit RbsB YP_008724119.1 4274772 D 1355100 CDS YP_008724120.1 556553612 17432975 4275773..4276717 1 NC_022648.1 catalyzes the formation of D-ribose 5-phosphate from ribose; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribokinase 4276717 17432975 P423_20805 Escherichia coli JJ1886 ribokinase YP_008724120.1 4275773 D 1355100 CDS YP_008724121.1 556553613 17432976 4276721..4277713 1 NC_022648.1 binds to the purF operator and coregulates other genes for de novo purine nucleotide synthesis; is involved in regulation of purB, purC, purEK, purHD, purL, purMN and guaBA expression; binds hypoxanthine and guanine as inducers; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4277713 17432976 P423_20810 Escherichia coli JJ1886 transcriptional regulator YP_008724121.1 4276721 D 1355100 CDS YP_008724122.1 556553614 17432977 complement(4277679..4279106) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4279106 17432977 P423_20815 Escherichia coli JJ1886 transporter YP_008724122.1 4277679 R 1355100 CDS YP_008724123.1 556553615 17432978 complement(4279129..4279821) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4279821 17432978 P423_20820 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008724123.1 4279129 R 1355100 CDS YP_008724124.1 556553616 17432985 complement(4285630..4286469) 1 NC_022648.1 Negatively regulates the transcription of the flagellar master operon flhDC by binding to the upstream region of the operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4286469 17432985 P423_20855 Escherichia coli JJ1886 transcriptional regulator YP_008724124.1 4285630 R 1355100 CDS YP_008724125.1 556553617 17432986 4286588..4286926 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4286926 17432986 P423_20860 Escherichia coli JJ1886 hypothetical protein YP_008724125.1 4286588 D 1355100 CDS YP_008724126.1 556553618 17432987 complement(4286951..4288471) 1 NC_022648.1 among the AAA+ ATPases, the YifB protease family belongs to the Helix 2 insert clade; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 4288471 17432987 P423_20865 Escherichia coli JJ1886 ATP-dependent protease YP_008724126.1 4286951 R 1355100 CDS YP_008724127.1 556553619 17432988 4289062..4290708 1 NC_022648.1 catalyzes the formation of 2-acetolactate from pyruvate; also known as acetolactate synthase large subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4290708 17432988 P423_20870 Escherichia coli JJ1886 acetolactate synthase YP_008724127.1 4289062 D 1355100 CDS YP_008724128.1 556553620 17432989 4290705..4290968 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4290968 ilvM 17432989 ilvM Escherichia coli JJ1886 acetolactate synthase YP_008724128.1 4290705 D 1355100 CDS YP_008724129.1 556553621 17432990 4290988..4291917 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; branched-chain amino acid aminotransferase 4291917 17432990 P423_20880 Escherichia coli JJ1886 branched-chain amino acid aminotransferase YP_008724129.1 4290988 D 1355100 CDS YP_008724130.1 556553622 17432991 4291982..4293832 1 NC_022648.1 catalyzes the dehydration of 2,3-dihydroxy-3-methylbutanoate to 3-methyl-2-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydroxy-acid dehydratase 4293832 17432991 P423_20885 Escherichia coli JJ1886 dihydroxy-acid dehydratase YP_008724130.1 4291982 D 1355100 CDS YP_008724131.1 556553623 17432992 4293832..4295379 1 NC_022648.1 threonine deaminase; threonine dehydratase; in Escherichia coli, IlvA is part of the isoleucine biosynthetic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine dehydratase 4295379 17432992 P423_20890 Escherichia coli JJ1886 threonine dehydratase YP_008724131.1 4293832 D 1355100 CDS YP_008724132.1 556553624 17432993 complement(4295376..4296266) 1 NC_022648.1 participates in controlling several genes involved in isoleucine and valine biosynthesis; activates the transcription of the ilvC gene in the presence of acetolactate or acetohydroxybutyrate; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4296266 17432993 P423_20895 Escherichia coli JJ1886 transcriptional regulator YP_008724132.1 4295376 R 1355100 CDS YP_008724133.1 556553625 17432994 4296416..4297891 1 NC_022648.1 catalyzes the formation of (R)-2,3-dihydroxy-3-methylbutanoate from (S)-2-hydroxy-2-methyl-3-oxobutanoate in valine and isoleucine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ketol-acid reductoisomerase 4297891 17432994 P423_20900 Escherichia coli JJ1886 ketol-acid reductoisomerase YP_008724133.1 4296416 D 1355100 CDS YP_008724134.1 556553626 17432995 complement(4297937..4298218) 1 NC_022648.1 rotamase C; accelerates isomerization of the peptidyl prolyl bond; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 4298218 17432995 P423_20905 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008724134.1 4297937 R 1355100 CDS YP_008724135.1 556553627 17432996 4298305..4300326 1 NC_022648.1 single-stranded DNA-dependent ATPase; initiates unwinding at a nick in the DNA; involved in DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase Rep 4300326 17432996 P423_20910 Escherichia coli JJ1886 ATP-dependent DNA helicase Rep YP_008724135.1 4298305 D 1355100 CDS YP_008724136.1 556553628 17432997 complement(4300373..4301857) 1 NC_022648.1 catalyzes the conversion of guanosine 5'-triphosphate,3'-diphosphate (pppGpp) to guanosine 5'-diphosphate,3'-diphosphate (ppGpp); pppGpp and ppGpp control the stringent response during amino acid starvation; Derived by automated computational analysis using gene prediction method: Protein Homology.; guanosine pentaphosphate phosphohydrolase 4301857 17432997 P423_20915 Escherichia coli JJ1886 guanosine pentaphosphate phosphohydrolase YP_008724136.1 4300373 R 1355100 CDS YP_008724137.1 556553629 17432998 complement(4301993..4303258) 1 NC_022648.1 enables ATP-dependent unwinding of double stranded RNA as a component of the RNA degradosome, a multi-enzyme complex important in RNA processing and messenger RNA degradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA helicase 4303258 17432998 P423_20920 Escherichia coli JJ1886 RNA helicase YP_008724137.1 4301993 R 1355100 CDS YP_008724138.1 556553630 17432999 4303389..4303718 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thioredoxin 4303718 trxA 17432999 trxA Escherichia coli JJ1886 thioredoxin YP_008724138.1 4303389 D 1355100 CDS YP_008724139.1 556553631 17433000 4303859..4303960 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; rho operon leader peptide 4303960 17433000 P423_20930 Escherichia coli JJ1886 rho operon leader peptide YP_008724139.1 4303859 D 1355100 CDS YP_008724140.1 556553632 17433001 4304045..4305304 1 NC_022648.1 An RNA-DNA helicase that actively releases nascent mRNAs from paused transcription complexes; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription termination factor Rho 4305304 rho 17433001 rho Escherichia coli JJ1886 transcription termination factor Rho YP_008724140.1 4304045 D 1355100 CDS YP_008724141.1 556553633 17433003 4305544..4306647 1 NC_022648.1 catalyzes the formation of alpha-N-acetylglucosaminyl-pyrophosphoryl-undecaprenyl from alpha-N-acetylglucosaminyl 1-phosphate and the lipid carrier undecaprenyl phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase 4306647 17433003 P423_20945 Escherichia coli JJ1886 UDP-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase YP_008724141.1 4305544 D 1355100 CDS YP_008724142.1 556553634 17433004 4306659..4307705 1 NC_022648.1 Enterobacterial Common Antigen (ECA) polysaccharide chain length modulation protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide biosynthesis protein WzzE 4307705 17433004 P423_20950 Escherichia coli JJ1886 lipopolysaccharide biosynthesis protein WzzE YP_008724142.1 4306659 D 1355100 CDS YP_008724143.1 556553635 17433005 4307761..4308891 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylglucosamine 2-epimerase 4308891 17433005 P423_20955 Escherichia coli JJ1886 UDP-N-acetylglucosamine 2-epimerase YP_008724143.1 4307761 D 1355100 CDS YP_008724144.1 556553636 17433006 4308888..4310150 1 NC_022648.1 catalyzes the oxidation of UDP-N-acetyl-D-mannosamine to UDP-N-acetylmannosaminuronic acid; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetyl-D-mannosamine dehydrogenase 4310150 wecC 17433006 wecC Escherichia coli JJ1886 UDP-N-acetyl-D-mannosamine dehydrogenase YP_008724144.1 4308888 D 1355100 CDS YP_008724145.1 556553637 17433007 4310150..4311217 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dTDP-glucose 4,6-dehydratase 4311217 17433007 P423_20965 Escherichia coli JJ1886 dTDP-glucose 4,6-dehydratase YP_008724145.1 4310150 D 1355100 CDS YP_008724146.1 556553638 17433008 4311236..4312117 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphate thymidylyltransferase 4312117 17433008 P423_20970 Escherichia coli JJ1886 glucose-1-phosphate thymidylyltransferase YP_008724146.1 4311236 D 1355100 CDS YP_008724147.1 556553639 17433009 4312095..4312769 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TDP-fucosamine acetyltransferase 4312769 17433009 P423_20975 Escherichia coli JJ1886 TDP-fucosamine acetyltransferase YP_008724147.1 4312095 D 1355100 CDS YP_008724148.1 556553640 17433010 4312774..4313904 1 NC_022648.1 catalyzes the formation of dTDP-D-fucosamine from dTDP-4-oxo-6-deoxy-D-glucose in enterobacterial common antigen biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; TDP-4-oxo-6-deoxy-D-glucose aminotransferase 4313904 17433010 P423_20980 Escherichia coli JJ1886 TDP-4-oxo-6-deoxy-D-glucose aminotransferase YP_008724148.1 4312774 D 1355100 CDS YP_008724149.1 556553641 17433011 4313906..4315156 1 NC_022648.1 involved in the movement of lipid III across the membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; translocase 4315156 17433011 P423_20985 Escherichia coli JJ1886 translocase YP_008724149.1 4313906 D 1355100 CDS YP_008724150.1 556553642 17433012 4315153..4316232 1 NC_022648.1 catalyzes the synthesis of a lipid-linked intermediate involved in ECA synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-alpha-L-fucosyltransferase 4316232 17433012 P423_20990 Escherichia coli JJ1886 4-alpha-L-fucosyltransferase YP_008724150.1 4315153 D 1355100 CDS YP_008724151.1 556553643 17433013 4316229..4317581 1 NC_022648.1 enterobacterial common antigen polymerase; Derived by automated computational analysis using gene prediction method: Protein Homology.; polymerase 4317581 17433013 P423_20995 Escherichia coli JJ1886 polymerase YP_008724151.1 4316229 D 1355100 CDS YP_008724152.1 556553644 17433014 4317584..4318324 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetyl-D-mannosaminuronic acid transferase 4318324 17433014 P423_21000 Escherichia coli JJ1886 UDP-N-acetyl-D-mannosaminuronic acid transferase YP_008724152.1 4317584 D 1355100 CDS YP_008724153.1 556553645 17433015 4318515..4319900 1 NC_022648.1 cryptic permease that may be involved in the transport of proline across the inner membrane; in Salmonella typhimurium, the proY gene is silent unless overexpressed on a multicopy plasmid or activated by a proZ mutation; Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 4319900 proY 17433015 proY Escherichia coli JJ1886 permease YP_008724153.1 4318515 D 1355100 CDS YP_008724154.1 556553646 17433020 4320586..4321821 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arylsulfatase 4321821 17433020 P423_21030 Escherichia coli JJ1886 arylsulfatase YP_008724154.1 4320586 D 1355100 CDS YP_008724155.1 556553647 17433021 complement(4321912..4323567) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arylsulfatase 4323567 17433021 P423_21035 Escherichia coli JJ1886 arylsulfatase YP_008724155.1 4321912 R 1355100 CDS YP_008724156.1 556554894 17433022 4323661..4323786 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4323786 17433022 P423_21040 Escherichia coli JJ1886 hypothetical protein YP_008724156.1 4323661 D 1355100 CDS YP_008724157.1 556554895 17433023 complement(4324197..4324787) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4324787 17433023 P423_21045 Escherichia coli JJ1886 hypothetical protein YP_008724157.1 4324197 R 1355100 CDS YP_008724158.1 556553648 17433024 complement(4324837..4326033) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; protoheme IX biogenesis protein 4326033 17433024 P423_21050 Escherichia coli JJ1886 protoheme IX biogenesis protein YP_008724158.1 4324837 R 1355100 CDS YP_008724159.1 556553649 17433025 complement(4326036..4327235) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; uroporphyrinogen III C-methyltransferase 4327235 17433025 P423_21055 Escherichia coli JJ1886 uroporphyrinogen III C-methyltransferase YP_008724159.1 4326036 R 1355100 CDS YP_008724160.1 556553650 17433026 complement(4327257..4327997) 1 NC_022648.1 catalyzes the formation of uroporphyrinogen-III from hydroxymethylbilane; functions in tetrapyrrole and heme biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; uroporphyrinogen-III synthase 4327997 hemD 17433026 hemD Escherichia coli JJ1886 uroporphyrinogen-III synthase YP_008724160.1 4327257 R 1355100 CDS YP_008724161.1 556553651 17433027 complement(4327994..4328935) 1 NC_022648.1 transformation of porphobilinogen to hydroxymethylbilane in porphyrin biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; porphobilinogen deaminase 4328935 hemC 17433027 hemC Escherichia coli JJ1886 porphobilinogen deaminase YP_008724161.1 4327994 R 1355100 CDS YP_008724162.1 556553652 17433028 4329322..4331868 1 NC_022648.1 catalyzes transfer of adenylyl group of ATP from pyrophosphate to the 3'-hydroxyl group to form cyclic AMP; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylate cyclase 4331868 cyaA 17433028 cyaA Escherichia coli JJ1886 adenylate cyclase YP_008724162.1 4329322 D 1355100 CDS YP_008724163.1 556553653 17433029 complement(4331908..4332228) 1 NC_022648.1 iron-dependent inhibitor of iron-sulfur cluster formation; iron-binding and oxidizing protein; defects in the mitochondrial frataxin protein cause Friedreich ataxis which is an autosomal recessive neurodegenerative disease; based on phylogenomic distribution this protein may have a role in iron-sulfur cluster protein assembly; Derived by automated computational analysis using gene prediction method: Protein Homology.; frataxin 4332228 cyaY 17433029 cyaY Escherichia coli JJ1886 frataxin YP_008724163.1 4331908 R 1355100 CDS YP_008724164.1 556553654 17433030 4332698..4332901 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4332901 17433030 P423_21080 Escherichia coli JJ1886 membrane protein YP_008724164.1 4332698 D 1355100 CDS YP_008724165.1 556553655 17433031 4332938..4333762 1 NC_022648.1 involved in lysine biosynthesis; DAP epimerase; produces DL-diaminopimelate from LL-diaminopimelate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diaminopimelate epimerase 4333762 dapF 17433031 dapF Escherichia coli JJ1886 diaminopimelate epimerase YP_008724165.1 4332938 D 1355100 CDS YP_008724166.1 556553656 17433032 4333759..4334466 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4334466 17433032 P423_21090 Escherichia coli JJ1886 hypothetical protein YP_008724166.1 4333759 D 1355100 CDS YP_008724167.1 556553657 17433033 4334463..4335359 1 NC_022648.1 site-specific tyrosine recombinase which cuts and rejoins DNA molecules; binds cooperatively to specific DNA consensus sites; forms a heterotetrameric complex with XerC; XerCD exhibit similar sequences; essential to convert chromosome dimers to monomers during cell division and functions during plasmid segregation; cell division protein FtsK may regulate the XerCD complex; enzyme from Streptococcus group has unusual active site motifs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase XerC 4335359 xerC 17433033 xerC Escherichia coli JJ1886 tyrosine recombinase XerC YP_008724167.1 4334463 D 1355100 CDS YP_008724168.1 556553658 17433034 4335359..4336075 1 NC_022648.1 YigB; member of the haloacid dehalogenase (HAD)-like hydrolases superfamily of protein; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; flavin mononucleotide phosphatase 4336075 17433034 P423_21100 Escherichia coli JJ1886 flavin mononucleotide phosphatase YP_008724168.1 4335359 D 1355100 CDS YP_008724169.1 556553659 17433035 4336159..4338321 1 NC_022648.1 unwinds DNA duplexes with 3' to 5' polarity with respect to the bound strand and initiates unwinding most effectively when a single-stranded region is present; involved in the post-incision events of nucleotide excision repair and methyl-directed mismatch repair; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-dependent helicase 4338321 uvrD 17433035 uvrD Escherichia coli JJ1886 DNA-dependent helicase YP_008724169.1 4336159 D 1355100 CDS YP_008724170.1 556553660 17433036 complement(4338376..4339278) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetolactate synthase 4339278 17433036 P423_21110 Escherichia coli JJ1886 acetolactate synthase YP_008724170.1 4338376 R 1355100 CDS YP_008724171.1 556553661 17433037 complement(4339361..4340125) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4340125 17433037 P423_21115 Escherichia coli JJ1886 hypothetical protein YP_008724171.1 4339361 R 1355100 CDS YP_008724172.1 556554896 17433038 complement(4340346..4340480) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4340480 17433038 P423_21120 Escherichia coli JJ1886 hypothetical protein YP_008724172.1 4340346 R 1355100 CDS YP_008724173.1 556553662 17433039 4340495..4341445 1 NC_022648.1 responsible for the influx of magnesium ions; Derived by automated computational analysis using gene prediction method: Protein Homology.; magnesium/nickel/cobalt transporter CorA 4341445 17433039 P423_21125 Escherichia coli JJ1886 magnesium/nickel/cobalt transporter CorA YP_008724173.1 4340495 D 1355100 CDS YP_008724174.1 556553663 17433040 complement(4341488..4341868) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4341868 17433040 P423_21130 Escherichia coli JJ1886 membrane protein YP_008724174.1 4341488 R 1355100 CDS YP_008724175.1 556553664 17433041 complement(4341883..4342299) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4342299 17433041 P423_21135 Escherichia coli JJ1886 hypothetical protein YP_008724175.1 4341883 R 1355100 CDS YP_008724176.1 556553665 17433042 complement(4342358..4343248) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chloramphenical resistance permease RarD 4343248 17433042 P423_21140 Escherichia coli JJ1886 chloramphenical resistance permease RarD YP_008724176.1 4342358 R 1355100 CDS YP_008724177.1 556553666 17433043 complement(4343300..4343767) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4343767 17433043 P423_21145 Escherichia coli JJ1886 hypothetical protein YP_008724177.1 4343300 R 1355100 CDS YP_008724178.1 556553667 17433044 4343932..4344801 1 NC_022648.1 catalyzes the hydrolysis of phosphatidylcholine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phospholipase A 4344801 17433044 P423_21150 Escherichia coli JJ1886 phospholipase A YP_008724178.1 4343932 D 1355100 CDS YP_008724179.1 556553668 17433045 4344920..4346755 1 NC_022648.1 functions in blocking illegitimate recombination, enhancing topoisomerase activity, initiating SOS signaling and clearing blocked replication forks; component of the RecF recombinational pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent DNA helicase RecQ 4346755 17433045 P423_21155 Escherichia coli JJ1886 ATP-dependent DNA helicase RecQ YP_008724179.1 4344920 D 1355100 CDS YP_008724180.1 556553669 17433046 4346820..4347440 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine transporter RhtB 4347440 17433046 P423_21160 Escherichia coli JJ1886 threonine transporter RhtB YP_008724180.1 4346820 D 1355100 CDS YP_008724181.1 556553670 17433047 complement(4347478..4348338) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 4348338 17433047 P423_21165 Escherichia coli JJ1886 transposase YP_008724181.1 4347478 R 1355100 CDS YP_008724182.1 556553671 17433048 complement(4348497..4349117) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; threonine transporter RhtB 4349117 rhtB 17433048 rhtB Escherichia coli JJ1886 threonine transporter RhtB YP_008724182.1 4348497 R 1355100 CDS YP_008724183.1 556553672 17433049 4349228..4350250 1 NC_022648.1 lecithinase B; catalyzes the conversion of 1-lysophosphatidylcholine to glycerophosphocholine; can also hydrolyze 2-acyl glycerophosphoethanolamine and other substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysophospholipase L2 4350250 17433049 P423_21175 Escherichia coli JJ1886 lysophospholipase L2 YP_008724183.1 4349228 D 1355100 CDS YP_008724184.1 556553673 17433050 4350258..4351058 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hydrolase 4351058 17433050 P423_21180 Escherichia coli JJ1886 hydrolase YP_008724184.1 4350258 D 1355100 CDS YP_008724185.1 556554897 17433051 4351134..4352033 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4352033 17433051 P423_21185 Escherichia coli JJ1886 membrane protein YP_008724185.1 4351134 D 1355100 CDS YP_008724186.1 556553674 17433052 complement(4351921..4352874) 1 NC_022648.1 homocysteine-binding ; positive regulator of metA, metE and metH; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4352874 17433052 P423_21190 Escherichia coli JJ1886 transcriptional regulator YP_008724186.1 4351921 R 1355100 CDS YP_008724187.1 556553675 17433053 4352992..4355253 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase 4355253 17433053 P423_21195 Escherichia coli JJ1886 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase YP_008724187.1 4352992 D 1355100 CDS YP_008724188.1 556554898 17433054 4355592..4356149 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 6-phospho 3-hexuloisomerase 4356149 17433054 P423_21200 Escherichia coli JJ1886 6-phospho 3-hexuloisomerase YP_008724188.1 4355592 D 1355100 CDS YP_008724189.1 556553676 17433055 4356191..4357699 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS glucose transporter subunit IIBC 4357699 17433055 P423_21205 Escherichia coli JJ1886 PTS glucose transporter subunit IIBC YP_008724189.1 4356191 D 1355100 CDS YP_008724190.1 556553677 17433056 4357750..4359747 1 NC_022648.1 catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during exponential growth and the tktB during stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transketolase 4359747 17433056 P423_21210 Escherichia coli JJ1886 transketolase YP_008724190.1 4357750 D 1355100 CDS YP_008724191.1 556554899 17433057 complement(4359777..4360622) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar isomerase 4360622 17433057 P423_21215 Escherichia coli JJ1886 sugar isomerase YP_008724191.1 4359777 R 1355100 CDS YP_008724192.1 556554900 17433058 complement(4360822..4361727) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; LysR family transcriptional regulator 4361727 17433058 P423_21220 Escherichia coli JJ1886 LysR family transcriptional regulator YP_008724192.1 4360822 R 1355100 CDS YP_008724193.1 556554901 17433059 complement(4361805..4363028) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; permease 4363028 17433059 P423_21225 Escherichia coli JJ1886 permease YP_008724193.1 4361805 R 1355100 CDS YP_008724194.1 556554902 17433060 complement(4363054..4363443) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glutamyl-tRNA amidotransferase 4363443 17433060 P423_21230 Escherichia coli JJ1886 glutamyl-tRNA amidotransferase YP_008724194.1 4363054 R 1355100 CDS YP_008724195.1 556553678 17433061 complement(4363460..4364416) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbamate kinase 4364416 17433061 P423_21235 Escherichia coli JJ1886 carbamate kinase YP_008724195.1 4363460 R 1355100 CDS YP_008724196.1 556553679 17433062 complement(4364409..4365833) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4365833 17433062 P423_21240 Escherichia coli JJ1886 hypothetical protein YP_008724196.1 4364409 R 1355100 CDS YP_008724197.1 556553680 17433063 complement(4365830..4367389) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4367389 17433063 P423_21245 Escherichia coli JJ1886 hypothetical protein YP_008724197.1 4365830 R 1355100 CDS YP_008724198.1 556554903 17433064 complement(4367484..4367882) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4367882 17433064 P423_21250 Escherichia coli JJ1886 hypothetical protein YP_008724198.1 4367484 R 1355100 CDS YP_008724199.1 556554904 17433065 4367924..4368217 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4368217 17433065 P423_21255 Escherichia coli JJ1886 hypothetical protein YP_008724199.1 4367924 D 1355100 CDS YP_008724200.1 556554905 17433066 complement(4368350..4369018) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; cysteine hydrolase 4369018 17433066 P423_21260 Escherichia coli JJ1886 cysteine hydrolase YP_008724200.1 4368350 R 1355100 CDS YP_008724201.1 556554906 17433067 4369149..4369244 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4369244 17433067 P423_21265 Escherichia coli JJ1886 hypothetical protein YP_008724201.1 4369149 D 1355100 CDS YP_008724202.1 556553681 17433068 complement(4369275..4370084) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carboxymethylenebutenolidase 4370084 17433068 P423_21270 Escherichia coli JJ1886 carboxymethylenebutenolidase YP_008724202.1 4369275 R 1355100 CDS YP_008724203.1 556553682 17433069 4370346..4371110 1 NC_022648.1 catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate; involved in the pyrimidine salvage pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; uridine phosphorylase 4371110 17433069 P423_21275 Escherichia coli JJ1886 uridine phosphorylase YP_008724203.1 4370346 D 1355100 CDS YP_008724204.1 556554907 17433070 complement(4371145..4372635) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; C4-dicarboxylate ABC transporter permease 4372635 17433070 P423_21280 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter permease YP_008724204.1 4371145 R 1355100 CDS YP_008724205.1 556554908 17433071 complement(4372648..4373154) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; permease 4373154 17433071 P423_21285 Escherichia coli JJ1886 permease YP_008724205.1 4372648 R 1355100 CDS YP_008724206.1 556554909 17433072 complement(4373171..4374145) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter substrate-binding protein 4374145 17433072 P423_21290 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008724206.1 4373171 R 1355100 CDS YP_008724207.1 556553683 17433073 complement(4374170..4374799) 1 NC_022648.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and pyruvate from 2-dehydro-3-deoxy-D-galactonate 6-phosphate; functions in galactonate metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-dehydro-3-deoxy-6-phosphogalactonate aldolase 4374799 17433073 P423_21295 Escherichia coli JJ1886 2-dehydro-3-deoxy-6-phosphogalactonate aldolase YP_008724207.1 4374170 R 1355100 CDS YP_008724208.1 556554910 17433074 complement(4374789..4375793) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; acidic carbohydrate kinase 4375793 17433074 P423_21300 Escherichia coli JJ1886 acidic carbohydrate kinase YP_008724208.1 4374789 R 1355100 CDS YP_008724209.1 556554911 17433075 complement(4375817..4376584) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 4376584 17433075 P423_21305 Escherichia coli JJ1886 transcriptional regulator YP_008724209.1 4375817 R 1355100 CDS YP_008724210.1 556553684 17433076 4376801..4378228 1 NC_022648.1 YigN; nuclease that may cleave DNA structures arising during the recombination of short-inverted repeats and thereby prevents the inversion of the internal sequence; transcription is induced by DNA-damaging agents such as nalidixic acid or mitomycin C in a LexA-dependent manner; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA recombination protein RmuC 4378228 17433076 P423_21310 Escherichia coli JJ1886 DNA recombination protein RmuC YP_008724210.1 4376801 D 1355100 CDS YP_008724211.1 556553685 17433077 4378323..4379078 1 NC_022648.1 Catalyzes the carbon methylation reaction in the biosynthesis of ubiquinone and menaquinone; Derived by automated computational analysis using gene prediction method: Protein Homology.; ubiquinone/menaquinone biosynthesis methyltransferase 4379078 ubiE 17433077 ubiE Escherichia coli JJ1886 ubiquinone/menaquinone biosynthesis methyltransferase YP_008724211.1 4378323 D 1355100 CDS YP_008724212.1 556553686 17433078 4379092..4379697 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4379697 17433078 P423_21320 Escherichia coli JJ1886 membrane protein YP_008724212.1 4379092 D 1355100 CDS YP_008724213.1 556553687 17433079 4379694..4381334 1 NC_022648.1 an Escherichia coli mutant results in accumulation of octaprenylphenol and no ubiquinone; functions in the formation of 2-octaprenyl-6-hydroxy-phenol from 2-octaprenylphenol in ubiquinone (coenzyme Q) biosynthesis; similar to eukaryotic proteins that exhibit kinase functions; Derived by automated computational analysis using gene prediction method: Protein Homology.; ubiquinone biosynthesis protein UbiB 4381334 ubiB 17433079 ubiB Escherichia coli JJ1886 ubiquinone biosynthesis protein UbiB YP_008724213.1 4379694 D 1355100 CDS YP_008724214.1 556553688 17433080 4381413..4381682 1 NC_022648.1 TatA; similar to TatE that is found in some proteobacteria; part of system that translocates proteins with a conserved twin arginine motif across the inner membrane; capable of translocating folded substrates typically those with bound cofactors; similar to a protein import system in thylakoid membranes; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit TatA 4381682 tatA 17433080 tatA Escherichia coli JJ1886 preprotein translocase subunit TatA YP_008724214.1 4381413 D 1355100 CDS YP_008724215.1 556553689 17433081 4381686..4382201 1 NC_022648.1 mediates the export of protein precursors bearing twin-arginine signal peptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; translocase 4382201 17433081 P423_21335 Escherichia coli JJ1886 translocase YP_008724215.1 4381686 D 1355100 CDS YP_008724216.1 556553690 17433082 4382204..4382980 1 NC_022648.1 with TatABE forms the twin-arginine translocation complex which is involved in the transport of proteins across the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; twin-arginine protein translocation system subunit TatC 4382980 17433082 P423_21340 Escherichia coli JJ1886 twin-arginine protein translocation system subunit TatC YP_008724216.1 4382204 D 1355100 CDS YP_008724217.1 556553691 17433083 4383022..4383804 1 NC_022648.1 magnesium dependent; involved in quality control of mutated Tat exported substrates; not involved in the Sec-independent protein export system; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNase TatD 4383804 17433083 P423_21345 Escherichia coli JJ1886 DNase TatD YP_008724217.1 4383022 D 1355100 CDS YP_008724218.1 556553692 17433084 complement(4383801..4384289) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4384289 rfaH 17433084 rfaH Escherichia coli JJ1886 transcriptional regulator YP_008724218.1 4383801 R 1355100 CDS YP_008724219.1 556553693 17433085 4384456..4385949 1 NC_022648.1 catalyzes the decarboxylation of 3-octaprenyl-4-hydroxy benzoate to 2-octaprenylphenol; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-polyprenyl-4-hydroxybenzoate decarboxylase 4385949 17433085 P423_21355 Escherichia coli JJ1886 3-polyprenyl-4-hydroxybenzoate decarboxylase YP_008724219.1 4384456 D 1355100 CDS YP_008724220.1 556553694 17433086 4385995..4386696 1 NC_022648.1 NAD(P)H-flavin reductase; catalyzes the reversible oxidation/reduction of NAD(P) and flavine mononucleotide; in Salmonella and E. coli this protein also reduces aquacob(III)alamin to cob(II)alamin; Derived by automated computational analysis using gene prediction method: Protein Homology.; FMN reductase 4386696 fre 17433086 fre Escherichia coli JJ1886 FMN reductase YP_008724220.1 4385995 D 1355100 CDS YP_008724221.1 556553695 17433087 complement(4386877..4388040) 1 NC_022648.1 FadA; fatty acid oxidation complex component beta; functions in a heterotetramer with FadB; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-ketoacyl-CoA thiolase 4388040 fadA 17433087 fadA Escherichia coli JJ1886 3-ketoacyl-CoA thiolase YP_008724221.1 4386877 R 1355100 CDS YP_008724222.1 556553696 17433088 complement(4388050..4390239) 1 NC_022648.1 includes enoyl-CoA hydratase, delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase, 3-hydroxyacyl-CoA dehydrogenase, and 3-hydroxybutyryl-CoA epimerase; catalyzes the formation of an hydroxyacyl-CoA by addition of water on enoyl-CoA; also exhibits 3-hydroxyacyl-CoA epimerase and 3-hydroxyacyl-CoA dehydrogenase activities; forms a heterotetramer with FadA; similar to FadI2J2 complex; functions in beta-oxidation of fatty acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; multifunctional fatty acid oxidation complex subunit alpha 4390239 fadB 17433088 fadB Escherichia coli JJ1886 multifunctional fatty acid oxidation complex subunit alpha YP_008724222.1 4388050 R 1355100 CDS YP_008724223.1 556553697 17433089 4390429..4391760 1 NC_022648.1 catalyzes the hydrolysis of dipeptides with a proline at the C-terminal; also catalyzes the low efficiency hydrolysis of organophosphate di- and tri-esters; Derived by automated computational analysis using gene prediction method: Protein Homology.; proline dipeptidase 4391760 17433089 P423_21375 Escherichia coli JJ1886 proline dipeptidase YP_008724223.1 4390429 D 1355100 CDS YP_008724224.1 556553698 17433090 4391760..4392374 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4392374 17433090 P423_21380 Escherichia coli JJ1886 hypothetical protein YP_008724224.1 4391760 D 1355100 CDS YP_008724225.1 556553699 17433091 4392413..4393864 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; potassium transporter 4393864 17433091 P423_21385 Escherichia coli JJ1886 potassium transporter YP_008724225.1 4392413 D 1355100 CDS YP_008724226.1 556553700 17433092 4393876..4394421 1 NC_022648.1 catalyzes the oxidation of protoporphyrinogen IX to form protoporphyrin IX; Derived by automated computational analysis using gene prediction method: Protein Homology.; protoporphyrinogen oxidase 4394421 hemG 17433092 hemG Escherichia coli JJ1886 protoporphyrinogen oxidase YP_008724226.1 4393876 D 1355100 CDS YP_008724227.1 556553701 17433097 complement(4399919..4400446) 1 NC_022648.1 in Escherichia coli the MobB protein is not essential but has been found to interact with multiple proteins involved in the molybdopterin guanine dinucleotide cofactor biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin-guanine dinucleotide biosynthesis protein B 4400446 17433097 P423_21415 Escherichia coli JJ1886 molybdopterin-guanine dinucleotide biosynthesis protein B YP_008724227.1 4399919 R 1355100 CDS YP_008724228.1 556553702 17433098 complement(4400428..4401012) 1 NC_022648.1 in Escherichia coli MobA links a guanosine 5'-phosphate to molydopterin to form molybdopterin guanine dinucleotide during molybdenum cofactor biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin-guanine dinucleotide biosynthesis protein MobA 4401012 mobA 17433098 mobA Escherichia coli JJ1886 molybdopterin-guanine dinucleotide biosynthesis protein MobA YP_008724228.1 4400428 R 1355100 CDS YP_008724229.1 556553703 17433099 4401082..4401351 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4401351 17433099 P423_21425 Escherichia coli JJ1886 hypothetical protein YP_008724229.1 4401082 D 1355100 CDS YP_008724230.1 556553704 17433100 4401428..4402414 1 NC_022648.1 catalyzes the phosphorylation of protein substrates at serine and threonine residues in vitro; specific substrate in vivo has not been identified yet; plays a role in long-term cell survival and expression of surface appendages; Derived by automated computational analysis using gene prediction method: Protein Homology.; serine/threonine protein kinase 4402414 17433100 P423_21430 Escherichia coli JJ1886 serine/threonine protein kinase YP_008724230.1 4401428 D 1355100 CDS YP_008724231.1 556553705 17433101 4402431..4403057 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiol-disulfide isomerase 4403057 17433101 P423_21435 Escherichia coli JJ1886 thiol-disulfide isomerase YP_008724231.1 4402431 D 1355100 CDS YP_008724232.1 556553706 17433103 complement(4404682..4405614) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acyltransferase 4405614 17433103 P423_21445 Escherichia coli JJ1886 acyltransferase YP_008724232.1 4404682 R 1355100 CDS YP_008724233.1 556553707 17433104 complement(4405734..4405970) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4405970 17433104 P423_21450 Escherichia coli JJ1886 hypothetical protein YP_008724233.1 4405734 R 1355100 CDS YP_008724234.1 556553708 17433105 4405972..4408758 1 NC_022648.1 has 3'-5' exonuclease, 5'-3' exonuclease and 5'-3'polymerase activities, primarily functions to fill gaps during DNA replication and repair; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase I 4408758 17433105 P423_21455 Escherichia coli JJ1886 DNA polymerase I YP_008724234.1 4405972 D 1355100 CDS YP_008724235.1 556554912 17433106 complement(4408977..4409126) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4409126 17433106 P423_21460 Escherichia coli JJ1886 hypothetical protein YP_008724235.1 4408977 R 1355100 CDS YP_008724236.1 556553709 17433107 complement(4409140..4409787) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein YsxC 4409787 17433107 P423_21465 Escherichia coli JJ1886 GTP-binding protein YsxC YP_008724236.1 4409140 R 1355100 CDS YP_008724237.1 556553710 17433108 4410354..4410863 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase activator 4410863 17433108 P423_21470 Escherichia coli JJ1886 GTPase activator YP_008724237.1 4410354 D 1355100 CDS YP_008724238.1 556553711 17433109 4411052..4412425 1 NC_022648.1 catalyzes the oxygen-independent formation of protoporphyrinogen-IX from coproporphyrinogen-III; Derived by automated computational analysis using gene prediction method: Protein Homology.; coproporphyrinogen III oxidase 4412425 17433109 P423_21475 Escherichia coli JJ1886 coproporphyrinogen III oxidase YP_008724238.1 4411052 D 1355100 CDS YP_008724239.1 556553712 17433110 complement(4412880..4414298) 1 NC_022648.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulation protein NR(I) 4414298 glnG 17433110 glnG Escherichia coli JJ1886 nitrogen regulation protein NR(I) YP_008724239.1 4412880 R 1355100 CDS YP_008724240.1 556553713 17433111 complement(4414301..4415350) 1 NC_022648.1 sensory histidine kinase in two-component regulatory system with GlnG; acts as a signal transducer which responds to the nitrogen level of cell and modulates the activity of ntrC by phosphorylation/dephosphorylation; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulation protein NR(II) 4415350 glnL 17433111 glnL Escherichia coli JJ1886 nitrogen regulation protein NR(II) YP_008724240.1 4414301 R 1355100 CDS YP_008724241.1 556553714 17433112 complement(4415524..4416933) 1 NC_022648.1 forms a homododecamer; forms glutamine from ammonia and glutamate with the conversion of ATP to ADP and phosphate; also functions in the assimilation of ammonia; highly regulated protein controlled by the addition/removal of adenylyl groups by adenylyltransferase from specific tyrosine residues; addition of adenylyl groups results in inactivation of the enzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine synthetase 4416933 glnA 17433112 glnA Escherichia coli JJ1886 glutamine synthetase YP_008724241.1 4415524 R 1355100 CDS YP_008724242.1 556553715 17433113 4417306..4419129 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein TypA 4419129 17433113 P423_21495 Escherichia coli JJ1886 GTP-binding protein TypA YP_008724242.1 4417306 D 1355100 CDS YP_008724243.1 556553716 17433114 complement(4419237..4420025) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DeoR family transcriptional regulator 4420025 17433114 P423_21500 Escherichia coli JJ1886 DeoR family transcriptional regulator YP_008724243.1 4419237 R 1355100 CDS YP_008724244.1 556553717 17433115 complement(4420065..4420961) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar kinase 4420961 17433115 P423_21505 Escherichia coli JJ1886 sugar kinase YP_008724244.1 4420065 R 1355100 CDS YP_008724245.1 556553718 17433116 4421134..4422012 1 NC_022648.1 catalyzes the formation of gamma hydroxybutyrate from succinate semialdehyde; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH-dependent gamma-hydroxybutyrate dehydrogenase 4422012 17433116 P423_21510 Escherichia coli JJ1886 NADH-dependent gamma-hydroxybutyrate dehydrogenase YP_008724245.1 4421134 D 1355100 CDS YP_008724246.1 556553719 17433117 4422037..4422924 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aldolase 4422924 17433117 P423_21515 Escherichia coli JJ1886 aldolase YP_008724246.1 4422037 D 1355100 CDS YP_008724247.1 556554913 17433118 4422957..4423967 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; molecular chaperone GroES 4423967 17433118 P423_21520 Escherichia coli JJ1886 molecular chaperone GroES YP_008724247.1 4422957 D 1355100 CDS YP_008724248.1 556554914 17433119 4424037..4425470 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MFS transporter 4425470 17433119 P423_21525 Escherichia coli JJ1886 MFS transporter YP_008724248.1 4424037 D 1355100 CDS YP_008724249.1 556553720 17433120 4425569..4426918 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; shikimate transporter 4426918 17433120 P423_21530 Escherichia coli JJ1886 shikimate transporter YP_008724249.1 4425569 D 1355100 CDS YP_008724250.1 556554915 17433121 4426908..4427795 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4427795 17433121 P423_21535 Escherichia coli JJ1886 hypothetical protein YP_008724250.1 4426908 D 1355100 CDS YP_008724251.1 556553721 17433122 4427936..4428535 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-D-glucose-1-phosphatase 4428535 17433122 P423_21540 Escherichia coli JJ1886 alpha-D-glucose-1-phosphatase YP_008724251.1 4427936 D 1355100 CDS YP_008724252.1 556553722 17433123 4428529..4429401 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4429401 17433123 P423_21545 Escherichia coli JJ1886 membrane protein YP_008724252.1 4428529 D 1355100 CDS YP_008724253.1 556553723 17433124 4429398..4429835 1 NC_022648.1 hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr); possible defense mechanism against a harmful effect of D-tyrosine; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-tyrosyl-tRNA(Tyr) deacylase 4429835 17433124 P423_21550 Escherichia coli JJ1886 D-tyrosyl-tRNA(Tyr) deacylase YP_008724253.1 4429398 D 1355100 CDS YP_008724254.1 556553724 17433125 4429832..4430821 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4430821 17433125 P423_21555 Escherichia coli JJ1886 hypothetical protein YP_008724254.1 4429832 D 1355100 CDS YP_008724255.1 556554916 17433126 complement(4430885..4431793) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lipase 4431793 17433126 P423_21560 Escherichia coli JJ1886 lipase YP_008724255.1 4430885 R 1355100 CDS YP_008724256.1 556554917 17433127 4432022..4432333 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcription elongation factor GreB 4432333 17433127 P423_21565 Escherichia coli JJ1886 transcription elongation factor GreB YP_008724256.1 4432022 D 1355100 CDS YP_008724257.1 556554918 17433128 4432334..4432624 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Cro/Cl family transcriptional regulator 4432624 17433128 P423_21570 Escherichia coli JJ1886 Cro/Cl family transcriptional regulator YP_008724257.1 4432334 D 1355100 CDS YP_008724258.1 556554919 17433129 4432709..4432921 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4432921 17433129 P423_21575 Escherichia coli JJ1886 hypothetical protein YP_008724258.1 4432709 D 1355100 CDS YP_008724259.1 556553725 17433130 4433658..4433876 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4433876 17433130 P423_21580 Escherichia coli JJ1886 hypothetical protein YP_008724259.1 4433658 D 1355100 CDS YP_008724260.1 556554920 17433131 complement(4434061..4434801) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4434801 17433131 P423_21585 Escherichia coli JJ1886 hypothetical protein YP_008724260.1 4434061 R 1355100 CDS YP_008724261.1 556554921 17433132 complement(4434826..4435674) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4435674 17433132 P423_21590 Escherichia coli JJ1886 hypothetical protein YP_008724261.1 4434826 R 1355100 CDS YP_008724262.1 556553726 17433133 4435988..4436206 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4436206 17433133 P423_21595 Escherichia coli JJ1886 hypothetical protein YP_008724262.1 4435988 D 1355100 CDS YP_008724263.1 556553727 17433134 complement(4436388..4437317) 1 NC_022648.1 required for the formation of active formate dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase accessory protein FdhE 4437317 17433134 P423_21600 Escherichia coli JJ1886 formate dehydrogenase accessory protein FdhE YP_008724263.1 4436388 R 1355100 CDS YP_008724264.1 556553728 17433135 complement(4437314..4437949) 1 NC_022648.1 cytochrome b556(FDO) component; heme containing; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit gamma 4437949 17433135 P423_21605 Escherichia coli JJ1886 formate dehydrogenase-N subunit gamma YP_008724264.1 4437314 R 1355100 CDS YP_008724265.1 556553729 17433136 complement(4437946..4438848) 1 NC_022648.1 beta subunit; involved in the use of formate as an electron donor during aerobic respiration; acts to transfer electrons from the major(alpha subunit) to the cytochrome b556(gamma subunit); Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase-N subunit beta 4438848 17433136 P423_21610 Escherichia coli JJ1886 formate dehydrogenase-N subunit beta YP_008724265.1 4437946 R 1355100 CDS YP_008724266.1 556554922 17433137 complement(4438861..4441275) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; formate dehydrogenase subunit alpha 4441275 17433137 P423_21615 Escherichia coli JJ1886 formate dehydrogenase subunit alpha YP_008724266.1 4438861 R 1355100 CDS YP_008724267.1 556554923 17433138 complement(4441324..4441911) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sulfate ABC transporter substrate-binding protein 4441911 17433138 P423_21620 Escherichia coli JJ1886 sulfate ABC transporter substrate-binding protein YP_008724267.1 4441324 R 1355100 CDS YP_008724268.1 556553730 17433139 4442105..4442938 1 NC_022648.1 involved in the production or activity of formate dehydrogenase-H which is active when nitrate is not present during anaerobic growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate dehydrogenase accessory protein 4442938 17433139 P423_21625 Escherichia coli JJ1886 formate dehydrogenase accessory protein YP_008724268.1 4442105 D 1355100 CDS YP_008724269.1 556553731 17433140 4443026..4443580 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4443580 17433140 P423_21630 Escherichia coli JJ1886 hypothetical protein YP_008724269.1 4443026 D 1355100 CDS YP_008724270.1 556553732 17433141 4443934..4445328 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glycoporin 4445328 17433141 P423_21635 Escherichia coli JJ1886 glycoporin YP_008724270.1 4443934 D 1355100 CDS YP_008724271.1 556553733 17433142 complement(4445369..4445683) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-rhamnose mutarotase 4445683 17433142 P423_21640 Escherichia coli JJ1886 L-rhamnose mutarotase YP_008724271.1 4445369 R 1355100 CDS YP_008724272.1 556553734 17433143 complement(4445693..4446517) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; rhamnulose-1-phosphate aldolase 4446517 17433143 P423_21645 Escherichia coli JJ1886 rhamnulose-1-phosphate aldolase YP_008724272.1 4445693 R 1355100 CDS YP_008724273.1 556553735 17433144 complement(4446784..4448043) 1 NC_022648.1 catalyzes the formation of L-rhamnulose from L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.; rhamnose isomerase 4448043 17433144 P423_21650 Escherichia coli JJ1886 rhamnose isomerase YP_008724273.1 4446784 R 1355100 CDS YP_008724274.1 556553736 17433145 complement(4448040..4449509) 1 NC_022648.1 catalyzes the ATP-dependent phosphorylation of rhamnulose; Derived by automated computational analysis using gene prediction method: Protein Homology.; rhamnulokinase 4449509 rhaB 17433145 rhaB Escherichia coli JJ1886 rhamnulokinase YP_008724274.1 4448040 R 1355100 CDS YP_008724275.1 556554924 17433146 4449588..4449737 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4449737 17433146 P423_21660 Escherichia coli JJ1886 hypothetical protein YP_008724275.1 4449588 D 1355100 CDS YP_008724276.1 556553737 17433147 4449797..4450633 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4450633 17433147 P423_21665 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008724276.1 4449797 D 1355100 CDS YP_008724277.1 556553738 17433148 4450617..4451555 1 NC_022648.1 activates the expression of rhaRS in response to L-rhamnose; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4451555 17433148 P423_21670 Escherichia coli JJ1886 transcriptional regulator YP_008724277.1 4450617 D 1355100 CDS YP_008724278.1 556553739 17433149 complement(4451552..4452586) 1 NC_022648.1 transports L-rhamnose and L-lyxose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar:proton symporter 4452586 17433149 P423_21675 Escherichia coli JJ1886 sugar:proton symporter YP_008724278.1 4451552 R 1355100 CDS YP_008724279.1 556553740 17433150 4452871..4453491 1 NC_022648.1 SodA; manganese binding; only present under aerobic conditions; destroys free radicals; Derived by automated computational analysis using gene prediction method: Protein Homology.; superoxide dismutase 4453491 17433150 P423_21680 Escherichia coli JJ1886 superoxide dismutase YP_008724279.1 4452871 D 1355100 CDS YP_008724280.1 556554925 17433151 complement(4453520..4453648) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4453648 17433151 P423_21685 Escherichia coli JJ1886 hypothetical protein YP_008724280.1 4453520 R 1355100 CDS YP_008724281.1 556553741 17433152 4453751..4454734 1 NC_022648.1 transports degraded pectin products into the bacterial cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-3-deoxygluconate permease 4454734 17433152 P423_21690 Escherichia coli JJ1886 2-keto-3-deoxygluconate permease YP_008724281.1 4453751 D 1355100 CDS YP_008724282.1 556553742 17433153 4454883..4455557 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-N-hydroxylaminopurine resistance protein 4455557 17433153 P423_21695 Escherichia coli JJ1886 6-N-hydroxylaminopurine resistance protein YP_008724282.1 4454883 D 1355100 CDS YP_008724283.1 556553743 17433154 complement(4455728..4457101) 1 NC_022648.1 part of two-component CpxA/CpxR system; senses envelope stress; upregulates a number of periplasmic folding and trafficking factors; Derived by automated computational analysis using gene prediction method: Protein Homology.; histidine kinase 4457101 cpxA 17433154 cpxA Escherichia coli JJ1886 histidine kinase YP_008724283.1 4455728 R 1355100 CDS YP_008724284.1 556553744 17433155 complement(4457098..4457796) 1 NC_022648.1 response regulator in two-component regulatory system with CpxA; part of the envelope stress response system; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4457796 17433155 P423_21705 Escherichia coli JJ1886 transcriptional regulator YP_008724284.1 4457098 R 1355100 CDS YP_008724285.1 556553745 17433156 4457943..4458446 1 NC_022648.1 repressor of the Cpx envelope stress response pathway which occurs via periplasmic interactions with CpxA; CpxP is degraded by DegP protease especially in the presence of misfolded substrates; Derived by automated computational analysis using gene prediction method: Protein Homology.; repressor CpxP 4458446 cpxP 17433156 cpxP Escherichia coli JJ1886 repressor CpxP YP_008724285.1 4457943 D 1355100 CDS YP_008724286.1 556553746 17433157 4458595..4459497 1 NC_022648.1 member of cation diffusion facilitator family; CDF; membrane-bound; induced by both zinc and iron, but does not induce resistance to zinc; can transport zinc(II) in a proton-dependent manner; instead this protein induces iron resistance; forms dimers; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron transporter 4459497 fieF 17433157 fieF Escherichia coli JJ1886 iron transporter YP_008724286.1 4458595 D 1355100 CDS YP_008724287.1 556553747 17433158 4459678..4460640 1 NC_022648.1 catalyzes the formation of D-fructose 1,6-bisphosphate from D-fructose 6-phosphate in glycolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; 6-phosphofructokinase 4460640 17433158 P423_21720 Escherichia coli JJ1886 6-phosphofructokinase YP_008724287.1 4459678 D 1355100 CDS YP_008724288.1 556553748 17433160 4460960..4461949 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfate transporter subunit 4461949 17433160 P423_21730 Escherichia coli JJ1886 sulfate transporter subunit YP_008724288.1 4460960 D 1355100 CDS YP_008724289.1 556553749 17433161 4462056..4462811 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; CDP-diacylglycerol pyrophosphatase 4462811 17433161 P423_21735 Escherichia coli JJ1886 CDP-diacylglycerol pyrophosphatase YP_008724289.1 4462056 D 1355100 CDS YP_008724290.1 556553750 17433162 complement(4462866..4463633) 1 NC_022648.1 Reversibly isomerizes the ketone sugar dihydroxyacetone phosphate to the aldehyde sugar glyceraldehyde-3-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; triosephosphate isomerase 4463633 17433162 P423_21740 Escherichia coli JJ1886 triosephosphate isomerase YP_008724290.1 4462866 R 1355100 CDS YP_008724291.1 556553751 17433163 complement(4463741..4464340) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4464340 17433163 P423_21745 Escherichia coli JJ1886 hypothetical protein YP_008724291.1 4463741 R 1355100 CDS YP_008724292.1 556553752 17433164 4464441..4464881 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4464881 17433164 P423_21750 Escherichia coli JJ1886 membrane protein YP_008724292.1 4464441 D 1355100 CDS YP_008724293.1 556553753 17433165 4465093..4465392 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4465392 17433165 P423_21755 Escherichia coli JJ1886 hypothetical protein YP_008724293.1 4465093 D 1355100 CDS YP_008724294.1 556553754 17433166 4465419..4465847 1 NC_022648.1 with UspC and Usp E is involved in resistance to UV radiation; Derived by automated computational analysis using gene prediction method: Protein Homology.; universal stress protein D 4465847 17433166 P423_21760 Escherichia coli JJ1886 universal stress protein D YP_008724294.1 4465419 D 1355100 CDS YP_008724295.1 556553755 17433167 complement(4465852..4466598) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferredoxin-NADP reductase 4466598 17433167 P423_21765 Escherichia coli JJ1886 ferredoxin-NADP reductase YP_008724295.1 4465852 R 1355100 CDS YP_008724296.1 556553756 17433168 complement(4466695..4467705) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose 1,6-bisphosphatase 4467705 17433168 P423_21770 Escherichia coli JJ1886 fructose 1,6-bisphosphatase YP_008724296.1 4466695 R 1355100 CDS YP_008724297.1 556553757 17433169 complement(4467876..4469384) 1 NC_022648.1 Converts glycerol and ADP to glycerol-3-phosphate and ADP; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol kinase 4469384 glpK 17433169 glpK Escherichia coli JJ1886 glycerol kinase YP_008724297.1 4467876 R 1355100 CDS YP_008724298.1 556553758 17433170 complement(4469407..4470252) 1 NC_022648.1 involved in the transport of glycerol into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol uptake facilitator GlpF 4470252 17433170 P423_21780 Escherichia coli JJ1886 glycerol uptake facilitator GlpF YP_008724298.1 4469407 R 1355100 CDS YP_008724299.1 556553759 17433171 4470677..4470922 1 NC_022648.1 interacts with FisZ and is necessary for Z-ring formation; Derived by automated computational analysis using gene prediction method: Protein Homology.; septal ring assembly protein ZapB 4470922 17433171 P423_21785 Escherichia coli JJ1886 septal ring assembly protein ZapB YP_008724299.1 4470677 D 1355100 CDS YP_008724300.1 556553760 17433172 complement(4471007..4471492) 1 NC_022648.1 regulator of RNase E; increases half-life and abundance of RNAs; interacts with RNase E possibly inhibiting catalytic activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonuclease activity regulator protein RraA 4471492 17433172 P423_21790 Escherichia coli JJ1886 ribonuclease activity regulator protein RraA YP_008724300.1 4471007 R 1355100 CDS YP_008724301.1 556553761 17433173 complement(4471585..4472511) 1 NC_022648.1 catalyzes the formation of dimethylmenaquinone from 1,4-dihydroxy-2-naphthoate and octaprenyl diphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 1,4-dihydroxy-2-naphthoate prenyltransferase 4472511 17433173 P423_21795 Escherichia coli JJ1886 1,4-dihydroxy-2-naphthoate prenyltransferase YP_008724301.1 4471585 R 1355100 CDS YP_008724302.1 556553762 17433174 complement(4472578..4473909) 1 NC_022648.1 heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 4473909 hslU 17433174 hslU Escherichia coli JJ1886 ATP-dependent protease YP_008724302.1 4472578 R 1355100 CDS YP_008724303.1 556553763 17433175 complement(4473919..4474449) 1 NC_022648.1 heat shock protein involved in degradation of misfolded proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; ATP-dependent protease 4474449 17433175 P423_21805 Escherichia coli JJ1886 ATP-dependent protease YP_008724303.1 4473919 R 1355100 CDS YP_008724304.1 556553764 17433176 complement(4474542..4475501) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsN 4475501 17433176 P423_21810 Escherichia coli JJ1886 cell division protein FtsN YP_008724304.1 4474542 R 1355100 CDS YP_008724305.1 556553765 17433177 complement(4475593..4476618) 1 NC_022648.1 negatively controls the transcription initiation of genes such as deoCABD, udp, and cdd encoding catabolizing enzymes and nupC, nupG, and tsx encoding transporting and pore-forming proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4476618 17433177 P423_21815 Escherichia coli JJ1886 transcriptional regulator YP_008724305.1 4475593 R 1355100 CDS YP_008724306.1 556553766 17433178 complement(4476774..4478972) 1 NC_022648.1 binding of PriA to forked DNA starts the assembly of the primosome, also possesses 3'-5' helicase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; primosome assembly protein PriA 4478972 17433178 P423_21820 Escherichia coli JJ1886 primosome assembly protein PriA YP_008724306.1 4476774 R 1355100 CDS YP_008724307.1 556553767 17433179 4479175..4479387 1 NC_022648.1 RpmE; there appears to be two types of ribosomal proteins L31 in bacterial genomes; some contain a CxxC motif while others do not; Bacillus subtilis has both types; the proteins in this cluster have the CXXC motif; RpmE is found in exponentially growing Bacilli while YtiA was found after exponential growth; expression of ytiA is controlled by a zinc-specific transcriptional repressor; RpmE contains one zinc ion and a CxxC motif is responsible for this binding; forms an RNP particle along with proteins L5, L18, and L25 and 5S rRNA; found crosslinked to L2 and L25 and EF-G; may be near the peptidyltransferase site of the 50S ribosome; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L31 4479387 rpmE 17433179 rpmE Escherichia coli JJ1886 50S ribosomal protein L31 YP_008724307.1 4479175 D 1355100 CDS YP_008724308.1 556553768 17433180 complement(4479448..4480056) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4480056 17433180 P423_21830 Escherichia coli JJ1886 hypothetical protein YP_008724308.1 4479448 R 1355100 CDS YP_008724309.1 556553769 17433181 complement(4480116..4480433) 1 NC_022648.1 when combined with S-adenosylmethionine represses the expression of the methionine regulon and of proteins involved in S-adenosylmethionine synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4480433 17433181 P423_21835 Escherichia coli JJ1886 transcriptional regulator YP_008724309.1 4480116 R 1355100 CDS YP_008724310.1 556553770 17433182 4480710..4481870 1 NC_022648.1 catalyzes the formation of cystathionine from L-cysteine and O-succinyl-L-homoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.; cystathionine gamma-synthase 4481870 17433182 P423_21840 Escherichia coli JJ1886 cystathionine gamma-synthase YP_008724310.1 4480710 D 1355100 CDS YP_008724311.1 556553771 17433183 4481873..4484305 1 NC_022648.1 multifunctional homodimeric enzyme that catalyzes the phosphorylation of aspartate to form aspartyl-4-phosphate as well as conversion of aspartate semialdehyde to homoserine; functions in a number of amino acid biosynthetic pathways; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional aspartate kinase II/homoserine dehydrogenase II 4484305 metL 17433183 metL Escherichia coli JJ1886 bifunctional aspartate kinase II/homoserine dehydrogenase II YP_008724311.1 4481873 D 1355100 CDS YP_008724312.1 556554926 17433184 complement(4484269..4485399) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4485399 17433184 P423_21850 Escherichia coli JJ1886 hypothetical protein YP_008724312.1 4484269 R 1355100 CDS YP_008724313.1 556554927 17433185 4485532..4487085 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 5'-nucleotidase 4487085 17433185 P423_21855 Escherichia coli JJ1886 5'-nucleotidase YP_008724313.1 4485532 D 1355100 CDS YP_008724314.1 556554928 17433186 complement(4487302..4487391) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4487391 17433186 P423_21860 Escherichia coli JJ1886 hypothetical protein YP_008724314.1 4487302 R 1355100 CDS YP_008724315.1 556553772 17433187 4487467..4488357 1 NC_022648.1 MTHFR; catalyzes NADH-linked reduction of 5,10-methylenetetrahydrofolate to 5-methyltetrahydrofolate using FAD as a cofactor; Derived by automated computational analysis using gene prediction method: Protein Homology.; 5,10-methylenetetrahydrofolate reductase 4488357 metF 17433187 metF Escherichia coli JJ1886 5,10-methylenetetrahydrofolate reductase YP_008724315.1 4487467 D 1355100 CDS YP_008724316.1 556553773 17433188 4488686..4490866 1 NC_022648.1 has catalase and peroxidase activities; Derived by automated computational analysis using gene prediction method: Protein Homology.; catalase/hydroperoxidase HPI(I) 4490866 17433188 P423_21870 Escherichia coli JJ1886 catalase/hydroperoxidase HPI(I) YP_008724316.1 4488686 D 1355100 CDS YP_008724317.1 556553774 17433189 4490960..4491865 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permease 4491865 17433189 P423_21875 Escherichia coli JJ1886 permease YP_008724317.1 4490960 D 1355100 CDS YP_008724318.1 556553775 17433190 complement(4491892..4492509) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4492509 17433190 P423_21880 Escherichia coli JJ1886 hypothetical protein YP_008724318.1 4491892 R 1355100 CDS YP_008724319.1 556553776 17433191 complement(4492622..4492816) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4492816 17433191 P423_21885 Escherichia coli JJ1886 hypothetical protein YP_008724319.1 4492622 R 1355100 CDS YP_008724320.1 556553777 17433192 complement(4492785..4493888) 1 NC_022648.1 forms dimers and octamers; involved in conversion of glycerol to dihydroxy-acetone; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol dehydrogenase 4493888 gldA 17433192 gldA Escherichia coli JJ1886 glycerol dehydrogenase YP_008724320.1 4492785 R 1355100 CDS YP_008724321.1 556553778 17433193 complement(4493899..4494561) 1 NC_022648.1 similar to transaldolase from Escherichia coli; many organisms have multiple copies; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-bisphosphate aldolase 4494561 17433193 P423_21895 Escherichia coli JJ1886 fructose-bisphosphate aldolase YP_008724321.1 4493899 R 1355100 CDS YP_008724322.1 556553779 17433194 complement(4494573..4497074) 1 NC_022648.1 Phosphotransferase system, enzyme I; transfers the phosphoryl group from phosphoenolpyruvate (PEP) to the phosphoryl carrier protein HPr; HPr transfers the phosphoryl group to subunit A; subunit IIA transfers a phosphoryl group to subunit IIB; subunit IIB transfers the phosphoryl group to the substrate; part of the phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active-transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIA 4497074 17433194 P423_21900 Escherichia coli JJ1886 PTS fructose transporter subunit IIA YP_008724322.1 4494573 R 1355100 CDS YP_008724323.1 556553780 17433195 4497383..4498462 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIC 4498462 17433195 P423_21905 Escherichia coli JJ1886 PTS fructose transporter subunit IIC YP_008724323.1 4497383 D 1355100 CDS YP_008724324.1 556553781 17433196 4498477..4498797 1 NC_022648.1 FrwB with FrwC, FrwD and PtsA forms a PEP-dependent sugar phosphotransferase system (PTS) permease which may phosphorylate and transport sugars into the cell; cytoplasmic protein that interacts with complex EIIA; contains the second phosphorylation site of the PTS; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 4498797 17433196 P423_21910 Escherichia coli JJ1886 PTS fructose transporter subunit IIB YP_008724324.1 4498477 D 1355100 CDS YP_008724325.1 556553782 17433197 4498848..4501145 1 NC_022648.1 involved in production of D-lactate from glucose under microaerobic conditions; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate acetyltransferase 4501145 pflD 17433197 pflD Escherichia coli JJ1886 formate acetyltransferase YP_008724325.1 4498848 D 1355100 CDS YP_008724326.1 556553783 17433198 4501111..4501989 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pyruvate formate lyase II activase 4501989 17433198 P423_21920 Escherichia coli JJ1886 pyruvate formate lyase II activase YP_008724326.1 4501111 D 1355100 CDS YP_008724327.1 556553784 17433199 4501991..4502332 1 NC_022648.1 FrwD with FrwB, FrwC and PtsA forms a PEP-dependent sugar phosphotransferase system permease which may phosphorylate and transport sugars into the cell; phosphorylated by EIIA; FrwB homolog; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS fructose transporter subunit IIB 4502332 17433199 P423_21925 Escherichia coli JJ1886 PTS fructose transporter subunit IIB YP_008724327.1 4501991 D 1355100 CDS YP_008724328.1 556553785 17433200 complement(4502319..4503170) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; AraC family transcriptional regulator 4503170 17433200 P423_21930 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008724328.1 4502319 R 1355100 CDS YP_008724329.1 556553786 17433201 complement(4503396..4505129) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4505129 17433201 P423_21935 Escherichia coli JJ1886 membrane protein YP_008724329.1 4503396 R 1355100 CDS YP_008724330.1 556553787 17433202 complement(4505312..4507963) 1 NC_022648.1 catalyzes the formation of oxaloacetate from phosphoenolpyruvate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoenolpyruvate carboxylase 4507963 17433202 P423_21940 Escherichia coli JJ1886 phosphoenolpyruvate carboxylase YP_008724330.1 4505312 R 1355100 CDS YP_008724331.1 556553788 17433203 complement(4508265..4509416) 1 NC_022648.1 catalyzes the formation of L-ornithine from N(2)-acetyl-L-ornithine in arginine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetylornithine deacetylase 4509416 17433203 P423_21945 Escherichia coli JJ1886 acetylornithine deacetylase YP_008724331.1 4508265 R 1355100 CDS YP_008724332.1 556553789 17433204 4509570..4510574 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyl-gamma-glutamyl-phosphate reductase 4510574 17433204 P423_21950 Escherichia coli JJ1886 N-acetyl-gamma-glutamyl-phosphate reductase YP_008724332.1 4509570 D 1355100 CDS YP_008724333.1 556553790 17433205 4510585..4511358 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetylglutamate kinase 4511358 17433205 P423_21955 Escherichia coli JJ1886 acetylglutamate kinase YP_008724333.1 4510585 D 1355100 CDS YP_008724334.1 556553791 17433206 4511419..4512792 1 NC_022648.1 catalyzes the formation of arginine from (N-L-arginino)succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.; argininosuccinate lyase 4512792 17433206 P423_21960 Escherichia coli JJ1886 argininosuccinate lyase YP_008724334.1 4511419 D 1355100 CDS YP_008724335.1 556553792 17433207 4513059..4513976 1 NC_022648.1 Activates the expression of a regulon of hydrogen peroxide-inducible genes such as katG, gor, ahpC, ahpF, oxyS, dps, fur and grxA; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4513976 17433207 P423_21965 Escherichia coli JJ1886 transcriptional regulator YP_008724335.1 4513059 D 1355100 CDS YP_008724336.1 556553793 17433208 complement(4513959..4515359) 1 NC_022648.1 catalyzes the conversion of NADPH to NADH; Derived by automated computational analysis using gene prediction method: Protein Homology.; soluble pyridine nucleotide transhydrogenase 4515359 17433208 P423_21970 Escherichia coli JJ1886 soluble pyridine nucleotide transhydrogenase YP_008724336.1 4513959 R 1355100 CDS YP_008724337.1 556553794 17433209 4515689..4516855 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase M20 4516855 17433209 P423_21975 Escherichia coli JJ1886 peptidase M20 YP_008724337.1 4515689 D 1355100 CDS YP_008724338.1 556553795 17433210 4516898..4518214 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; MFS transporter 4518214 17433210 P423_21980 Escherichia coli JJ1886 MFS transporter YP_008724338.1 4516898 D 1355100 CDS YP_008724339.1 556553796 17433211 4518264..4518968 1 NC_022648.1 negatively controls the expression of fabA and fabB, genes involved in the unsaturated fatty acid biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4518968 17433211 P423_21985 Escherichia coli JJ1886 transcriptional regulator YP_008724339.1 4518264 D 1355100 CDS YP_008724340.1 556553797 17433212 4518968..4519327 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4519327 17433212 P423_21990 Escherichia coli JJ1886 membrane protein YP_008724340.1 4518968 D 1355100 CDS YP_008724341.1 556553798 17433213 complement(4519367..4520467) 1 NC_022648.1 catalyzes the formation of 5-methyl-uridine at position 54 in all tRNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA (uracil-5-)-methyltransferase 4520467 17433213 P423_21995 Escherichia coli JJ1886 tRNA (uracil-5-)-methyltransferase YP_008724341.1 4519367 R 1355100 CDS YP_008724342.1 556553799 17433214 4520836..4522680 1 NC_022648.1 involved in the active translocation of vitamin B12 (cyanocobalamin) across the outer membrane to the periplasmic space; Derived by automated computational analysis using gene prediction method: Protein Homology.; vitamin B12/cobalamin outer membrane transporter 4522680 btuB 17433214 btuB Escherichia coli JJ1886 vitamin B12/cobalamin outer membrane transporter YP_008724342.1 4520836 D 1355100 CDS YP_008724343.1 556554929 17433215 4522694..4523482 1 NC_022648.1 converts L-glutamate to D-glutamate, a component of peptidoglycan; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glutamate racemase 4523482 17433215 P423_22005 Escherichia coli JJ1886 glutamate racemase YP_008724343.1 4522694 D 1355100 CDS YP_008724344.1 556553800 17433221 4529096..4530124 1 NC_022648.1 catalyzes the reduction of UDP-N-acetylglucosamine enolpyruvate to form UDP-N-acetylmuramate in peptidoglycan biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylenolpyruvoylglucosamine reductase 4530124 murB 17433221 murB Escherichia coli JJ1886 UDP-N-acetylenolpyruvoylglucosamine reductase YP_008724344.1 4529096 D 1355100 CDS YP_008724345.1 556553801 17433222 4530121..4531086 1 NC_022648.1 catalyzes the formation of biotinyl-5'-AMP, also acts as a transcriptional repressor of the biotin operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor 4531086 17433222 P423_22040 Escherichia coli JJ1886 bifunctional biotin--[acetyl-CoA-carboxylase] synthetase/biotin operon repressor YP_008724345.1 4530121 D 1355100 CDS YP_008724346.1 556553802 17433223 complement(4531115..4532065) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; pantothenate kinase 4532065 17433223 P423_22045 Escherichia coli JJ1886 pantothenate kinase YP_008724346.1 4531115 R 1355100 CDS YP_008724347.1 556554930 17433228 4532983..4534167 1 NC_022648.1 EF-Tu; promotes GTP-dependent binding of aminoacyl-tRNA to the A-site of ribosomes during protein biosynthesis; when the tRNA anticodon matches the mRNA codon, GTP hydrolysis results; the inactive EF-Tu-GDP leaves the ribosome and release of GDP is promoted by elongation factor Ts; many prokaryotes have two copies of the gene encoding EF-Tu; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; elongation factor Tu 4534167 tuf 17433228 tuf Escherichia coli JJ1886 elongation factor Tu YP_008724347.1 4532983 D 1355100 CDS YP_008724348.1 556553803 17433229 4534397..4534780 1 NC_022648.1 forms a complex with SecY and SecG; SecYEG forms a putative protein-conducting channel to which secA binds and translocates targeted polypeptides across the cytoplasmic membrane, a process driven by ATP and a proton-motive force; Derived by automated computational analysis using gene prediction method: Protein Homology.; preprotein translocase subunit SecE 4534780 secE 17433229 secE Escherichia coli JJ1886 preprotein translocase subunit SecE YP_008724348.1 4534397 D 1355100 CDS YP_008724349.1 556553804 17433230 4534782..4535327 1 NC_022648.1 Modulates Rho-dependent transcription termination; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcription antitermination protein NusG 4535327 nusG 17433230 nusG Escherichia coli JJ1886 transcription antitermination protein NusG YP_008724349.1 4534782 D 1355100 CDS YP_008724350.1 556553805 17433231 4535486..4535914 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L11 4535914 17433231 P423_22085 Escherichia coli JJ1886 50S ribosomal protein L11 YP_008724350.1 4535486 D 1355100 CDS YP_008724351.1 556553806 17433232 4535918..4536622 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L1 4536622 17433232 P423_22090 Escherichia coli JJ1886 50S ribosomal protein L1 YP_008724351.1 4535918 D 1355100 CDS YP_008724352.1 556553807 17433233 4536914..4537411 1 NC_022648.1 binds the two ribosomal protein L7/L12 dimers and anchors them to the large ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L10 4537411 rplJ 17433233 rplJ Escherichia coli JJ1886 50S ribosomal protein L10 YP_008724352.1 4536914 D 1355100 CDS YP_008724353.1 556553808 17433234 4537478..4537843 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L7/L12 4537843 17433234 P423_22100 Escherichia coli JJ1886 50S ribosomal protein L7/L12 YP_008724353.1 4537478 D 1355100 CDS YP_008724354.1 556553809 17433235 4538163..4542191 1 NC_022648.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates; beta subunit is part of the catalytic core which binds with a sigma factor to produce the holoenzyme; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit beta 4542191 rpoB 17433235 rpoB Escherichia coli JJ1886 DNA-directed RNA polymerase subunit beta YP_008724354.1 4538163 D 1355100 CDS YP_008724355.1 556553810 17433236 4542268..4546491 1 NC_022648.1 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Subunit beta' binds to sigma factor allowing it to bind to the -10 region of the promoter; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-directed RNA polymerase subunit beta' 4546491 17433236 P423_22110 Escherichia coli JJ1886 DNA-directed RNA polymerase subunit beta' YP_008724355.1 4542268 D 1355100 CDS YP_008724356.1 556553811 17433237 complement(4546733..4547866) 1 NC_022648.1 in Escherichia coli this enzyme functions in thiamine biosynthesis along with thiFSGI and iscS; with ThiFSG catalyzes the formation of thiazole phosphate from tyrosine, cysteine and 1-deoxy-D-xylulose-5-phosphate; forms a complex with ThiG; contains an iron-sulfur center; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine biosynthesis protein ThiH 4547866 thiH 17433237 thiH Escherichia coli JJ1886 thiamine biosynthesis protein ThiH YP_008724356.1 4546733 R 1355100 CDS YP_008724357.1 556553812 17433238 complement(4547863..4548633) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiazole synthase 4548633 17433238 P423_22120 Escherichia coli JJ1886 thiazole synthase YP_008724357.1 4547863 R 1355100 CDS YP_008724358.1 556553813 17433239 complement(4548635..4548835) 1 NC_022648.1 with ThiF, ThiG, and ThiO catalyzes the formation of the thiazole moiety of thiamine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sulfur carrier protein ThiS 4548835 17433239 P423_22125 Escherichia coli JJ1886 sulfur carrier protein ThiS YP_008724358.1 4548635 R 1355100 CDS YP_008724359.1 556553814 17433240 complement(4548819..4549574) 1 NC_022648.1 ATP-dependent adenylate transferase, transfers adenyl moiety to the MoeD subunit of molybdopterin synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.; molybdopterin biosynthesis protein MoeB 4549574 17433240 P423_22130 Escherichia coli JJ1886 molybdopterin biosynthesis protein MoeB YP_008724359.1 4548819 R 1355100 CDS YP_008724360.1 556553815 17433241 complement(4549567..4550202) 1 NC_022648.1 catalyzes the formation of thiamine monophosphate from 4-methyl-5-(beta-hydroxyethyl)-thiazole monophosphate and 4-amino-5-hydroxymethyl pyrimidine pyrophosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamine-phosphate pyrophosphorylase 4550202 17433241 P423_22135 Escherichia coli JJ1886 thiamine-phosphate pyrophosphorylase YP_008724360.1 4549567 R 1355100 CDS YP_008724361.1 556553816 17433242 complement(4550202..4552097) 1 NC_022648.1 catalyzes the formation of 4-amino-2-methyl-5-phosphomethylpyrimidine from 5-amino-1-(5-phospho-D-ribosyl)imidazole and S-adenosyl-L-methionine in thiamine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphomethylpyrimidine synthase ThiC 4552097 17433242 P423_22140 Escherichia coli JJ1886 phosphomethylpyrimidine synthase ThiC YP_008724361.1 4550202 R 1355100 CDS YP_008724362.1 556553817 17433243 complement(4552330..4552806) 1 NC_022648.1 binds specifically to the major sigma factor sigma 70; active in stationary phase; Derived by automated computational analysis using gene prediction method: Protein Homology.; anti-RNA polymerase sigma 70 factor 4552806 17433243 P423_22145 Escherichia coli JJ1886 anti-RNA polymerase sigma 70 factor YP_008724362.1 4552330 R 1355100 CDS YP_008724363.1 556553818 17433244 4552901..4553674 1 NC_022648.1 can catalyze hydrolysis of broad range of dinucleotide pyrophosphates but prefers reduced form of NADH; requires divalent metal ions such as magnesium and manganese and produces two mononucleoside 5'-phosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; NADH pyrophosphatase 4553674 nudC 17433244 nudC Escherichia coli JJ1886 NADH pyrophosphatase YP_008724363.1 4552901 D 1355100 CDS YP_008724364.1 556553819 17433245 4553714..4554778 1 NC_022648.1 catalyzes the formation of coproporphyrinogen from uroporphyrinogen III; Derived by automated computational analysis using gene prediction method: Protein Homology.; uroporphyrinogen decarboxylase 4554778 hemE 17433245 hemE Escherichia coli JJ1886 uroporphyrinogen decarboxylase YP_008724364.1 4553714 D 1355100 CDS YP_008724365.1 556553820 17433246 4554788..4555459 1 NC_022648.1 Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA; cleaves DNA containing urea residues, AP sites, base mismatches, insertion/deletion mismatches, flaps, and pseudo-Y structures; Derived by automated computational analysis using gene prediction method: Protein Homology.; endonuclease VIII 4555459 17433246 P423_22160 Escherichia coli JJ1886 endonuclease VIII YP_008724365.1 4554788 D 1355100 CDS YP_008724366.1 556553821 17433247 4555502..4556092 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4556092 17433247 P423_22165 Escherichia coli JJ1886 hypothetical protein YP_008724366.1 4555502 D 1355100 CDS YP_008724367.1 556553822 17433248 4556279..4556551 1 NC_022648.1 histone-like DNA-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4556551 17433248 P423_22170 Escherichia coli JJ1886 transcriptional regulator YP_008724367.1 4556279 D 1355100 CDS YP_008724368.1 556553823 17433249 4556558..4557259 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4557259 17433249 P423_22175 Escherichia coli JJ1886 membrane protein YP_008724368.1 4556558 D 1355100 CDS YP_008724369.1 556553824 17433250 complement(4557261..4557680) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; zinc resistance protein 4557680 zraP 17433250 zraP Escherichia coli JJ1886 zinc resistance protein YP_008724369.1 4557261 R 1355100 CDS YP_008724370.1 556553825 17433251 4557918..4559294 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein ZraS 4559294 17433251 P423_22185 Escherichia coli JJ1886 sensor protein ZraS YP_008724370.1 4557918 D 1355100 CDS YP_008724371.1 556553826 17433252 4559291..4560616 1 NC_022648.1 DNA-binding response regulator in two-component regulatory system with ZraS; response regulator/sigma54 interaction protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetoacetate metabolism regulatory protein AtoC 4560616 17433252 P423_22190 Escherichia coli JJ1886 acetoacetate metabolism regulatory protein AtoC YP_008724371.1 4559291 D 1355100 CDS YP_008724372.1 556553827 17433253 complement(4560613..4561902) 1 NC_022648.1 catalyzes the formation of N(1)-(5-phospho-D-ribosyl)glycinamide from 5-phospho-D-ribosylamine and glycine in purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoribosylamine--glycine ligase 4561902 17433253 P423_22195 Escherichia coli JJ1886 phosphoribosylamine--glycine ligase YP_008724372.1 4560613 R 1355100 CDS YP_008724373.1 556553828 17433254 complement(4561914..4563503) 1 NC_022648.1 involved in de novo purine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; purine biosynthesis protein purH 4563503 purH 17433254 purH Escherichia coli JJ1886 purine biosynthesis protein purH YP_008724373.1 4561914 R 1355100 CDS YP_008724374.1 556554931 17433259 4569214..4569597 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4569597 17433259 P423_22225 Escherichia coli JJ1886 hypothetical protein YP_008724374.1 4569214 D 1355100 CDS YP_008724375.1 556553829 17433260 complement(4569661..4570104) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyltransferase 4570104 17433260 P423_22230 Escherichia coli JJ1886 acetyltransferase YP_008724375.1 4569661 R 1355100 CDS YP_008724376.1 556553830 17433261 4570261..4571190 1 NC_022648.1 catalyzes the formation of O-succinyl-L-homoserine from succinyl-CoA and L-homoserine in methionine biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; homoserine O-succinyltransferase 4571190 17433261 P423_22235 Escherichia coli JJ1886 homoserine O-succinyltransferase YP_008724376.1 4570261 D 1355100 CDS YP_008724377.1 556553831 17433262 4571459..4573060 1 NC_022648.1 Catalyzes the aldol condensation of glyoxylate with acetyl-CoA to form malate as part of the second step of the glyoxylate bypass and an alternative to the tricarboxylic acid cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate synthase 4573060 17433262 P423_22240 Escherichia coli JJ1886 malate synthase YP_008724377.1 4571459 D 1355100 CDS YP_008724378.1 556553832 17433263 4573090..4574394 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4574394 17433263 P423_22245 Escherichia coli JJ1886 isocitrate lyase YP_008724378.1 4573090 D 1355100 CDS YP_008724379.1 556553833 17433264 4574519..4576243 1 NC_022648.1 catalyzes the phosphorylation/dephosphorylation of the enzyme isocitrate dehydrogenase on a specific serine which regulates activity; unphosphorylated IDH is fully active when cells are grown on glucose while the enzyme becomes phosphorylated and inactive in the presence of acetate or ethanol; Derived by automated computational analysis using gene prediction method: Protein Homology.; bifunctional isocitrate dehydrogenase kinase/phosphatase 4576243 aceK 17433264 aceK Escherichia coli JJ1886 bifunctional isocitrate dehydrogenase kinase/phosphatase YP_008724379.1 4574519 D 1355100 CDS YP_008724380.1 556553834 17433265 complement(4576260..4577084) 1 NC_022648.1 regulates the glyoxylate bypass operon (aceBAK), which encodes isocitrate lyase, malate synthase and isocitrate dehydrogenase kinase/phosphorylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 4577084 17433265 P423_22255 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008724380.1 4576260 R 1355100 CDS YP_008724381.1 556553835 17433266 4577285..4580968 1 NC_022648.1 one of two methionine synthases in Escherichia coli; MetH catalyzes a methyl transfer reaction from methyltetrahydrofolate to homocysteine to create methionine; requires zinc for activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; B12-dependent methionine synthase 4580968 metH 17433266 metH Escherichia coli JJ1886 B12-dependent methionine synthase YP_008724381.1 4577285 D 1355100 CDS YP_008724382.1 556554932 17433267 4581389..4581838 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4581838 17433267 P423_22265 Escherichia coli JJ1886 membrane protein YP_008724382.1 4581389 D 1355100 CDS YP_008724383.1 556553836 17433268 4582009..4583640 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4583640 17433268 P423_22270 Escherichia coli JJ1886 membrane protein YP_008724383.1 4582009 D 1355100 CDS YP_008724384.1 556553837 17433269 complement(4583730..4584419) 1 NC_022648.1 peptidase E; catalyzes the hydrolysis of dipeptides with an N-terminal aspartate residue; belongs to peptidase S51 family; Derived by automated computational analysis using gene prediction method: Protein Homology.; (alpha)-aspartyl dipeptidase 4584419 17433269 P423_22275 Escherichia coli JJ1886 (alpha)-aspartyl dipeptidase YP_008724384.1 4583730 R 1355100 CDS YP_008724385.1 556553838 17433270 4584526..4584681 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4584681 17433270 P423_22280 Escherichia coli JJ1886 hypothetical protein YP_008724385.1 4584526 D 1355100 CDS YP_008724386.1 556553839 17433271 complement(4584801..4586030) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-sorbose 1-phosphate reductase 4586030 17433271 P423_22285 Escherichia coli JJ1886 L-sorbose 1-phosphate reductase YP_008724386.1 4584801 R 1355100 CDS YP_008724387.1 556553840 17433272 complement(4586082..4586906) 1 NC_022648.1 hosphoenolpyruvate-dependent sugar phosphotransferase system catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IID with IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IID 4586906 17433272 P423_22290 Escherichia coli JJ1886 PTS mannose transporter subunit IID YP_008724387.1 4586082 R 1355100 CDS YP_008724388.1 556553841 17433273 complement(4586917..4587714) 1 NC_022648.1 catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; the IIC domain forms the PTS system translocation channel and contains the specific substrate-binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannose transporter subunit IIC 4587714 17433273 P423_22295 Escherichia coli JJ1886 PTS mannose transporter subunit IIC YP_008724388.1 4586917 R 1355100 CDS YP_008724389.1 556553842 17433274 complement(4587780..4588274) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS friuctose transporter subunit IIB 4588274 17433274 P423_22300 Escherichia coli JJ1886 PTS friuctose transporter subunit IIB YP_008724389.1 4587780 R 1355100 CDS YP_008724390.1 556553843 17433275 complement(4588274..4588681) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sorbose transporter subunit IIA 4588681 17433275 P423_22305 Escherichia coli JJ1886 PTS sorbose transporter subunit IIA YP_008724390.1 4588274 R 1355100 CDS YP_008724391.1 556553844 17433276 complement(4588691..4589497) 1 NC_022648.1 Converts D-sorbitol-dphosphate to D-fructose-6-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; sorbitol-6-phosphate 2-dehydrogenase 4589497 17433276 P423_22310 Escherichia coli JJ1886 sorbitol-6-phosphate 2-dehydrogenase YP_008724391.1 4588691 R 1355100 CDS YP_008724392.1 556553845 17433277 complement(4589567..4590514) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Cro/Cl family transcriptional regulator 4590514 17433277 P423_22315 Escherichia coli JJ1886 Cro/Cl family transcriptional regulator YP_008724392.1 4589567 R 1355100 CDS YP_008724393.1 556553846 17433278 4590862..4591734 1 NC_022648.1 catalyzes the synthesis of pseudouridine from U-2604 in the 23S ribosomal RNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA pseudouridine synthase F 4591734 17433278 P423_22320 Escherichia coli JJ1886 23S rRNA pseudouridine synthase F YP_008724393.1 4590862 D 1355100 CDS YP_008724394.1 556553847 17433279 complement(4591735..4592007) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4592007 17433279 P423_22325 Escherichia coli JJ1886 hypothetical protein YP_008724394.1 4591735 R 1355100 CDS YP_008724395.1 556553848 17433280 complement(4592260..4593609) 1 NC_022648.1 catalyzes the formation of 4-phospho-L-aspartate from L-aspartate and ATP; functions in amino acid biosynthesis; lysine sensitive; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate kinase 4593609 17433280 P423_22330 Escherichia coli JJ1886 aspartate kinase YP_008724395.1 4592260 R 1355100 CDS YP_008724396.1 556553849 17433281 4594134..4595783 1 NC_022648.1 functions in sugar metabolism in glycolysis and the Embden-Meyerhof pathways (EMP) and in gluconeogenesis; catalyzes reversible isomerization of glucose-6-phosphate to fructose-6-phosphate; member of PGI family; Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-6-phosphate isomerase 4595783 pgi 17433281 pgi Escherichia coli JJ1886 glucose-6-phosphate isomerase YP_008724396.1 4594134 D 1355100 CDS YP_008724397.1 556553850 17433282 4596281..4596523 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4596523 17433282 P423_22340 Escherichia coli JJ1886 hypothetical protein YP_008724397.1 4596281 D 1355100 CDS YP_008724398.1 556553851 17433283 4596638..4597276 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4597276 17433283 P423_22345 Escherichia coli JJ1886 hypothetical protein YP_008724398.1 4596638 D 1355100 CDS YP_008724399.1 556553852 17433284 4597273..4598010 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4598010 17433284 P423_22350 Escherichia coli JJ1886 hypothetical protein YP_008724399.1 4597273 D 1355100 CDS YP_008724400.1 556553853 17433285 4598010..4600106 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4600106 17433285 P423_22355 Escherichia coli JJ1886 membrane protein YP_008724400.1 4598010 D 1355100 CDS YP_008724401.1 556554933 17433286 complement(4600153..4600431) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4600431 17433286 P423_22360 Escherichia coli JJ1886 hypothetical protein YP_008724401.1 4600153 R 1355100 CDS YP_008724402.1 556554934 17433287 4600491..4600649 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4600649 17433287 P423_22365 Escherichia coli JJ1886 hypothetical protein YP_008724402.1 4600491 D 1355100 CDS YP_008724403.1 556553854 17433288 4600646..4601056 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphate-starvation-inducible protein PsiE 4601056 17433288 P423_22370 Escherichia coli JJ1886 phosphate-starvation-inducible protein PsiE YP_008724403.1 4600646 D 1355100 CDS YP_008724404.1 556553855 17433289 complement(4601150..4602040) 1 NC_022648.1 with MalKFE is involved in the transport of maltose into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose transporter permease 4602040 malG 17433289 malG Escherichia coli JJ1886 maltose transporter permease YP_008724404.1 4601150 R 1355100 CDS YP_008724405.1 556553856 17433290 complement(4602055..4603599) 1 NC_022648.1 with MalKGE is involved in maltose transport into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose transporter membrane protein 4603599 malF 17433290 malF Escherichia coli JJ1886 maltose transporter membrane protein YP_008724405.1 4602055 R 1355100 CDS YP_008724406.1 556553857 17433291 complement(4603753..4604943) 1 NC_022648.1 functions in the MalKFGE ABC transporter complex to transport maltose into the cell by using ATP hydrolysis; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 4604943 malE 17433291 malE Escherichia coli JJ1886 sugar ABC transporter substrate-binding protein YP_008724406.1 4603753 R 1355100 CDS YP_008724407.1 556554935 17433292 complement(4605036..4605131) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter 4605131 17433292 P423_22390 Escherichia coli JJ1886 sugar ABC transporter YP_008724407.1 4605036 R 1355100 CDS YP_008724408.1 556553858 17433293 4605308..4606423 1 NC_022648.1 with malEFG is involved in import of maltose/maltodextrin; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 4606423 17433293 P423_22395 Escherichia coli JJ1886 sugar ABC transporter ATP-binding protein YP_008724408.1 4605308 D 1355100 CDS YP_008724409.1 556553859 17433294 4606495..4607835 1 NC_022648.1 porin involved in the transport of maltose and maltodextrins; Derived by automated computational analysis using gene prediction method: Protein Homology.; maltoporin 4607835 lamB 17433294 lamB Escherichia coli JJ1886 maltoporin YP_008724409.1 4606495 D 1355100 CDS YP_008724410.1 556553860 17433295 4608068..4608988 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; maltose operon protein 4608988 17433295 P423_22405 Escherichia coli JJ1886 maltose operon protein YP_008724410.1 4608068 D 1355100 CDS YP_008724411.1 556553861 17433296 4609167..4609664 1 NC_022648.1 catalyzes the formation of 4-hydroxybenzoate from chorismate; Derived by automated computational analysis using gene prediction method: Protein Homology.; chorismate pyruvate lyase 4609664 ubiC 17433296 ubiC Escherichia coli JJ1886 chorismate pyruvate lyase YP_008724411.1 4609167 D 1355100 CDS YP_008724412.1 556553862 17433297 4609677..4610549 1 NC_022648.1 catalyzes the conversion of 4-Hydroxybenzoate into 3-octaprenyl-4-hydroxybenzoate, as part of the ubiquinone biosynthesis pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; 4-hydroxybenzoate polyprenyltransferase 4610549 ubiA 17433297 ubiA Escherichia coli JJ1886 4-hydroxybenzoate polyprenyltransferase YP_008724412.1 4609677 D 1355100 CDS YP_008724413.1 556553863 17433298 complement(4610704..4613187) 1 NC_022648.1 PlsB; catalyzes the formation of 1-acyl-sn-glycerol 3-phosphate by transfering the acyl moiety from acyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate acyltransferase 4613187 17433298 P423_22420 Escherichia coli JJ1886 glycerol-3-phosphate acyltransferase YP_008724413.1 4610704 R 1355100 CDS YP_008724414.1 556553864 17433299 4613298..4613666 1 NC_022648.1 catalyzes the phosphorylation of diacylglycerol to form diacylglycerol phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; diacylglycerol kinase 4613666 17433299 P423_22425 Escherichia coli JJ1886 diacylglycerol kinase YP_008724414.1 4613298 D 1355100 CDS YP_008724415.1 556553865 17433300 4613776..4614384 1 NC_022648.1 Represses a number of genes involved in the response to DNA damage; Derived by automated computational analysis using gene prediction method: Protein Homology.; LexA repressor 4614384 17433300 P423_22430 Escherichia coli JJ1886 LexA repressor YP_008724415.1 4613776 D 1355100 CDS YP_008724416.1 556553866 17433301 4614457..4615782 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA-damage-inducible protein 4615782 17433301 P423_22435 Escherichia coli JJ1886 DNA-damage-inducible protein YP_008724416.1 4614457 D 1355100 CDS YP_008724417.1 556553867 17433302 4615898..4616107 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4616107 17433302 P423_22440 Escherichia coli JJ1886 hypothetical protein YP_008724417.1 4615898 D 1355100 CDS YP_008724418.1 556553868 17433303 complement(4616149..4616664) 1 NC_022648.1 Acts as a negative controlling element, employing Zn(2+) as a cofactor to bind the operator of the repressed genes znuACB; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4616664 17433303 P423_22445 Escherichia coli JJ1886 transcriptional regulator YP_008724418.1 4616149 R 1355100 CDS YP_008724419.1 556553869 17433304 4616820..4617815 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA-dihydrouridine synthase A 4617815 17433304 P423_22450 Escherichia coli JJ1886 tRNA-dihydrouridine synthase A YP_008724419.1 4616820 D 1355100 CDS YP_008724420.1 556553870 17433305 4617949..4618191 1 NC_022648.1 coordinately regulated along with pspA; PspF-dependent induction in response to secretin overexpression in Yersinia; Derived by automated computational analysis using gene prediction method: Protein Homology.; phage-shock protein 4618191 pspG 17433305 pspG Escherichia coli JJ1886 phage-shock protein YP_008724420.1 4617949 D 1355100 CDS YP_008724421.1 556553871 17433306 complement(4618356..4619339) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quinone oxidoreductase 4619339 17433306 P423_22460 Escherichia coli JJ1886 quinone oxidoreductase YP_008724421.1 4618356 R 1355100 CDS YP_008724422.1 556554936 17433307 complement(4619445..4621481) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; oxidoreductase 4621481 17433307 P423_22465 Escherichia coli JJ1886 oxidoreductase YP_008724422.1 4619445 R 1355100 CDS YP_008724423.1 556554937 17433308 complement(4621492..4622772) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4622772 17433308 P423_22470 Escherichia coli JJ1886 hypothetical protein YP_008724423.1 4621492 R 1355100 CDS YP_008724424.1 556554938 17433309 complement(4622799..4623578) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; enoyl-CoA hydratase 4623578 17433309 P423_22475 Escherichia coli JJ1886 enoyl-CoA hydratase YP_008724424.1 4622799 R 1355100 CDS YP_008724425.1 556554939 17433310 complement(4623571..4625142) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; CoA-transferase 4625142 17433310 P423_22480 Escherichia coli JJ1886 CoA-transferase YP_008724425.1 4623571 R 1355100 CDS YP_008724426.1 556554940 17433311 4625398..4626432 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; regulator 4626432 17433311 P423_22485 Escherichia coli JJ1886 regulator YP_008724426.1 4625398 D 1355100 CDS YP_008724427.1 556553872 17433312 4626505..4627920 1 NC_022648.1 unwinds double stranded DNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA helicase 4627920 17433312 P423_22490 Escherichia coli JJ1886 DNA helicase YP_008724427.1 4626505 D 1355100 CDS YP_008724428.1 556553873 17433313 4627973..4629052 1 NC_022648.1 converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine racemase 4629052 alr 17433313 alr Escherichia coli JJ1886 alanine racemase YP_008724428.1 4627973 D 1355100 CDS YP_008724429.1 556554941 17433314 4629075..4629632 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; nicotinamide mononucleotide transporter 4629632 17433314 P423_22500 Escherichia coli JJ1886 nicotinamide mononucleotide transporter YP_008724429.1 4629075 D 1355100 CDS YP_008724430.1 556554942 17433315 4629629..4630633 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; NAD metabolism ATPase/kinase 4630633 17433315 P423_22505 Escherichia coli JJ1886 NAD metabolism ATPase/kinase YP_008724430.1 4629629 D 1355100 CDS YP_008724431.1 556553874 17433316 4630715..4631908 1 NC_022648.1 catalyzes the formation of L-glutamate and an aromatic oxo acid from an aromatic amino acid and 2-oxoglutarate; Derived by automated computational analysis using gene prediction method: Protein Homology.; aromatic amino acid aminotransferase 4631908 17433316 P423_22510 Escherichia coli JJ1886 aromatic amino acid aminotransferase YP_008724431.1 4630715 D 1355100 CDS YP_008724432.1 556553875 17433317 4632090..4634834 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-oxoglutarate dehydrogenase E1 4634834 17433317 P423_22515 Escherichia coli JJ1886 2-oxoglutarate dehydrogenase E1 YP_008724432.1 4632090 D 1355100 CDS YP_008724433.1 556553876 17433318 4634867..4636021 1 NC_022648.1 component of 2-oxoglutarate dehydrogenase complex; catalyzes the transfer of succinyl coenzyme A to form succinyl CoA as part of the conversion of 2-oxoglutarate to succinyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; dihydrolipoamide succinyltransferase 4636021 17433318 P423_22520 Escherichia coli JJ1886 dihydrolipoamide succinyltransferase YP_008724433.1 4634867 D 1355100 CDS YP_008724434.1 556554943 17433319 4636033..4637451 1 NC_022648.1 E3 component of 2-oxoglutarate dehydrogenase complex; catalyzes the oxidation of dihydrolipoamide to lipoamide; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dihydrolipoamide dehydrogenase 4637451 17433319 P423_22525 Escherichia coli JJ1886 dihydrolipoamide dehydrogenase YP_008724434.1 4636033 D 1355100 CDS YP_008724435.1 556553877 17433320 4637473..4638642 1 NC_022648.1 catalyzes the interconversion of succinyl-CoA and succinate; Derived by automated computational analysis using gene prediction method: Protein Homology.; malate--CoA ligase subunit beta 4638642 sucC 17433320 sucC Escherichia coli JJ1886 malate--CoA ligase subunit beta YP_008724435.1 4637473 D 1355100 CDS YP_008724436.1 556553878 17433321 4638655..4639527 1 NC_022648.1 Catalyzes the only substrate-level phosphorylation in the TCA cycle; Derived by automated computational analysis using gene prediction method: Protein Homology.; succinyl-CoA synthetase subunit alpha 4639527 17433321 P423_22535 Escherichia coli JJ1886 succinyl-CoA synthetase subunit alpha YP_008724436.1 4638655 D 1355100 CDS YP_008724437.1 556554944 17433322 4639739..4641238 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4641238 17433322 P423_22540 Escherichia coli JJ1886 membrane protein YP_008724437.1 4639739 D 1355100 CDS YP_008724438.1 556554945 17433323 4641250..4642323 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lactate dehydrogenase 4642323 17433323 P423_22545 Escherichia coli JJ1886 lactate dehydrogenase YP_008724438.1 4641250 D 1355100 CDS YP_008724439.1 556553879 17433324 complement(4642312..4643670) 1 NC_022648.1 response regulator of a two-component regulatory system involved in the activation of nitrogen assimilation genes; interacts with sigma-54; Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrogen regulation protein NR(I) 4643670 glnG 17433324 glnG Escherichia coli JJ1886 nitrogen regulation protein NR(I) YP_008724439.1 4642312 R 1355100 CDS YP_008724440.1 556554946 17433325 complement(4643663..4645483) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATPase 4645483 17433325 P423_22555 Escherichia coli JJ1886 ATPase YP_008724440.1 4643663 R 1355100 CDS YP_008724441.1 556553880 17433326 4645760..4646473 1 NC_022648.1 Class B; non-specific; catalyzes the dephosphorylation of organic phosphomonoesters; also has phosphotransferase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphotransferase 4646473 aphA 17433326 aphA Escherichia coli JJ1886 phosphotransferase YP_008724441.1 4645760 D 1355100 CDS YP_008724442.1 556553881 17433327 4646584..4647000 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thiamin phosphate synthase 4647000 17433327 P423_22565 Escherichia coli JJ1886 thiamin phosphate synthase YP_008724442.1 4646584 D 1355100 CDS YP_008724443.1 556553882 17433328 4647004..4647360 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4647360 17433328 P423_22570 Escherichia coli JJ1886 hypothetical protein YP_008724443.1 4647004 D 1355100 CDS YP_008724444.1 556553883 17433329 complement(4647395..4650217) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; excinuclease ABC subunit A 4650217 17433329 P423_22575 Escherichia coli JJ1886 excinuclease ABC subunit A YP_008724444.1 4647395 R 1355100 CDS YP_008724445.1 556553884 17433330 4650472..4651008 1 NC_022648.1 binds to single stranded DNA and PriA helcase facilitate replication restart; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 4651008 17433330 P423_22580 Escherichia coli JJ1886 single-stranded DNA-binding protein YP_008724445.1 4650472 D 1355100 CDS YP_008724446.1 556553885 17433331 complement(4651107..4651388) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4651388 17433331 P423_22585 Escherichia coli JJ1886 membrane protein YP_008724446.1 4651107 R 1355100 CDS YP_008724447.1 556553886 17433332 4651817..4653403 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4653403 17433332 P423_22590 Escherichia coli JJ1886 membrane protein YP_008724447.1 4651817 D 1355100 CDS YP_008724448.1 556553887 17433333 complement(4653406..4653729) 1 NC_022648.1 regulates genes involved in response to oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4653729 17433333 P423_22595 Escherichia coli JJ1886 transcriptional regulator YP_008724448.1 4653406 R 1355100 CDS YP_008724449.1 556553888 17433334 4653815..4654279 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4654279 17433334 P423_22600 Escherichia coli JJ1886 transcriptional regulator YP_008724449.1 4653815 D 1355100 CDS YP_008724450.1 556553889 17433335 4654826..4656175 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; permase 4656175 17433335 P423_22605 Escherichia coli JJ1886 permase YP_008724450.1 4654826 D 1355100 CDS YP_008724451.1 556553890 17433336 4656326..4657975 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sodium:proton antiporter 4657975 17433336 P423_22610 Escherichia coli JJ1886 sodium:proton antiporter YP_008724451.1 4656326 D 1355100 CDS YP_008724452.1 556554947 17433337 complement(4658011..4658895) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 4658895 17433337 P423_22615 Escherichia coli JJ1886 transcriptional regulator YP_008724452.1 4658011 R 1355100 CDS YP_008724453.1 556554948 17433338 4658999..4659409 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; LrgA 4659409 17433338 P423_22620 Escherichia coli JJ1886 LrgA YP_008724453.1 4658999 D 1355100 CDS YP_008724454.1 556554949 17433339 4659402..4660091 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; LrgB 4660091 17433339 P423_22625 Escherichia coli JJ1886 LrgB YP_008724454.1 4659402 D 1355100 CDS YP_008724455.1 556553891 17433340 complement(4660130..4661779) 1 NC_022648.1 member of the sodium:solute symporter family; cotranscribed with the acs gene which encodes acetyl coenzyme A synthase; mutations affect acetate uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; actetate permease 4661779 actP 17433340 actP Escherichia coli JJ1886 actetate permease YP_008724455.1 4660130 R 1355100 CDS YP_008724456.1 556553892 17433341 complement(4661776..4662090) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4662090 17433341 P423_22635 Escherichia coli JJ1886 membrane protein YP_008724456.1 4661776 R 1355100 CDS YP_008724457.1 556553893 17433342 complement(4662300..4664258) 1 NC_022648.1 Acs; catalyzes the conversion of acetate and CoA to acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; acetyl-CoA synthetase 4664258 17433342 P423_22640 Escherichia coli JJ1886 acetyl-CoA synthetase YP_008724457.1 4662300 R 1355100 CDS YP_008724458.1 556553894 17433343 4664650..4666086 1 NC_022648.1 catalyzes the formate-dependent reduction of nitrite to ammonia; cytochrome C552; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C nitrite reductase subunit c552 4666086 nrfA 17433343 nrfA Escherichia coli JJ1886 cytochrome C nitrite reductase subunit c552 YP_008724458.1 4664650 D 1355100 CDS YP_008724459.1 556553895 17433344 4666131..4666697 1 NC_022648.1 part of nitrite reductase complex; NrfB is active at high nitrate conditions; NrfA, B, C, and D are essential for the formate-dependent nitrite reduction to ammonia; Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C nitrite reductase pentaheme subunit 4666697 17433344 P423_22650 Escherichia coli JJ1886 cytochrome C nitrite reductase pentaheme subunit YP_008724459.1 4666131 D 1355100 CDS YP_008724460.1 556553896 17433345 4666694..4667365 1 NC_022648.1 4Fe4S subunit; may be involved in the transfer of electrons from quinones to the c-type cytochromes; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate-dependent nitrite reductase subunit NrfC 4667365 17433345 P423_22655 Escherichia coli JJ1886 formate-dependent nitrite reductase subunit NrfC YP_008724460.1 4666694 D 1355100 CDS YP_008724461.1 556553897 17433346 4667362..4668318 1 NC_022648.1 membrane protein, may be involved in the transfer of electrons from quinones to c-type cytochromes; Derived by automated computational analysis using gene prediction method: Protein Homology.; formate-dependent nitrite reductase subunit NrfD 4668318 17433346 P423_22660 Escherichia coli JJ1886 formate-dependent nitrite reductase subunit NrfD YP_008724461.1 4667362 D 1355100 CDS YP_008724462.1 556553898 17433347 4668398..4670056 1 NC_022648.1 with NrfF and NrfG catalyzes the insertion of heme into cytochrome c552; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme lyase subunit NrfE 4670056 17433347 P423_22665 Escherichia coli JJ1886 heme lyase subunit NrfE YP_008724462.1 4668398 D 1355100 CDS YP_008724463.1 556553899 17433348 4670049..4670432 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; nitrite reductase subunit F 4670432 17433348 P423_22670 Escherichia coli JJ1886 nitrite reductase subunit F YP_008724463.1 4670049 D 1355100 CDS YP_008724464.1 556553900 17433349 4670429..4671025 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; formate-dependent nitrite reductase complex subunit NrfG 4671025 17433349 P423_22675 Escherichia coli JJ1886 formate-dependent nitrite reductase complex subunit NrfG YP_008724464.1 4670429 D 1355100 CDS YP_008724465.1 556553901 17433350 4671368..4672681 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; proton glutamate symport protein 4672681 17433350 P423_22680 Escherichia coli JJ1886 proton glutamate symport protein YP_008724465.1 4671368 D 1355100 CDS YP_008724466.1 556553902 17433351 complement(4673170..4673859) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4673859 17433351 P423_22685 Escherichia coli JJ1886 hypothetical protein YP_008724466.1 4673170 R 1355100 CDS YP_008724467.1 556553903 17433353 complement(4675490..4676323) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C550 4676323 17433353 P423_22695 Escherichia coli JJ1886 cytochrome C550 YP_008724467.1 4675490 R 1355100 CDS YP_008724468.1 556553904 17433354 complement(4676323..4677372) 1 NC_022648.1 transports peptides consisting of two or three amino acids; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide ABC transporter permease 4677372 17433354 P423_22700 Escherichia coli JJ1886 peptide ABC transporter permease YP_008724468.1 4676323 R 1355100 CDS YP_008724469.1 556554950 17433355 complement(4677472..4679040) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter substrate-binding protein 4679040 17433355 P423_22705 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008724469.1 4677472 R 1355100 CDS YP_008724470.1 556554951 17433356 complement(4679415..4681094) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4681094 17433356 P423_22710 Escherichia coli JJ1886 hypothetical protein YP_008724470.1 4679415 R 1355100 CDS YP_008724471.1 556554952 17433357 complement(4681143..4681562) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; spermidine/putrescine ABC transporter substrate-binding protein 4681562 17433357 P423_22715 Escherichia coli JJ1886 spermidine/putrescine ABC transporter substrate-binding protein YP_008724471.1 4681143 R 1355100 CDS YP_008724472.1 556553905 17433358 complement(4681760..4683226) 1 NC_022648.1 part of a multidrug efflux system involved in resistance to acriflavin, puromycin, erytjhromycin and tetraphenylarsonium chloride; member of the outer membrane factor (OMF) family; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug RND transporter 4683226 17433358 P423_22720 Escherichia coli JJ1886 multidrug RND transporter YP_008724472.1 4681760 R 1355100 CDS YP_008724473.1 556553906 17433359 complement(4683223..4685274) 1 NC_022648.1 possibly part of a tripartite efflux system composed of MdtN, MdtO and MdtP which could be involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 4685274 17433359 P423_22725 Escherichia coli JJ1886 multidrug transporter YP_008724473.1 4683223 R 1355100 CDS YP_008724474.1 556553907 17433360 complement(4685274..4686305) 1 NC_022648.1 with MdtO and MdtP is involved in resistance to puromycin, acriflavine and tetraphenylarsonium chloride; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug resistance protein MdtN 4686305 17433360 P423_22730 Escherichia coli JJ1886 multidrug resistance protein MdtN YP_008724474.1 4685274 R 1355100 CDS YP_008724475.1 556553908 17433361 complement(4686324..4686599) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4686599 17433361 P423_22735 Escherichia coli JJ1886 hypothetical protein YP_008724475.1 4686324 R 1355100 CDS YP_008724476.1 556553909 17433362 complement(4686808..4688793) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4688793 17433362 P423_22740 Escherichia coli JJ1886 hypothetical protein YP_008724476.1 4686808 R 1355100 CDS YP_008724477.1 556553910 17433363 complement(4689066..4689995) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-allose kinase 4689995 17433363 P423_22745 Escherichia coli JJ1886 D-allose kinase YP_008724477.1 4689066 R 1355100 CDS YP_008724478.1 556553911 17433364 complement(4689979..4690674) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; allulose-6-phosphate 3-epimerase 4690674 17433364 P423_22750 Escherichia coli JJ1886 allulose-6-phosphate 3-epimerase YP_008724478.1 4689979 R 1355100 CDS YP_008724479.1 556553912 17433365 complement(4690685..4691665) 1 NC_022648.1 functions to transport ribose at high affinity; forms a complex with RbsA2C2B; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose ABC transporter permease 4691665 rbsC 17433365 rbsC Escherichia coli JJ1886 ribose ABC transporter permease YP_008724479.1 4690685 R 1355100 CDS YP_008724480.1 556553913 17433366 complement(4691644..4693176) 1 NC_022648.1 with RbsBCD acts to import ribose into the cell; RbsA contains 2 ATP-binding domain; Derived by automated computational analysis using gene prediction method: Protein Homology.; D-ribose transporter ATP binding protein 4693176 17433366 P423_22760 Escherichia coli JJ1886 D-ribose transporter ATP binding protein YP_008724480.1 4691644 R 1355100 CDS YP_008724481.1 556553914 17433367 complement(4693304..4694245) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; cytochrome C 4694245 17433367 P423_22765 Escherichia coli JJ1886 cytochrome C YP_008724481.1 4693304 R 1355100 CDS YP_008724482.1 556553915 17433368 complement(4694298..4695188) 1 NC_022648.1 involved in rpiB and als operon repression; Derived by automated computational analysis using gene prediction method: Protein Homology.; RpiR family transcriptional regulator 4695188 17433368 P423_22770 Escherichia coli JJ1886 RpiR family transcriptional regulator YP_008724482.1 4694298 R 1355100 CDS YP_008724483.1 556554953 17433369 4695249..4695353 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4695353 17433369 P423_22775 Escherichia coli JJ1886 hypothetical protein YP_008724483.1 4695249 D 1355100 CDS YP_008724484.1 556553916 17433370 4695547..4695996 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose 5-phosphate isomerase 4695996 17433370 P423_22780 Escherichia coli JJ1886 ribose 5-phosphate isomerase YP_008724484.1 4695547 D 1355100 CDS YP_008724485.1 556553917 17433371 4696065..4696421 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4696421 17433371 P423_22785 Escherichia coli JJ1886 membrane protein YP_008724485.1 4696065 D 1355100 CDS YP_008724486.1 556553918 17433372 complement(4696449..4697207) 1 NC_022648.1 required for the use of phosphonates and phosphite as phosphorus sources; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate metabolism protein PhnP 4697207 phnP 17433372 phnP Escherichia coli JJ1886 phosphonate metabolism protein PhnP YP_008724486.1 4696449 R 1355100 CDS YP_008724487.1 556553919 17433373 complement(4697209..4697643) 1 NC_022648.1 PhnO in Salmonella enterica catalyzes the acetylation of a range of aminoalkylphosphonic acids; part of the biochemical pathway that enables the cell to use phosphonates as a phosphorus source; Escherichia coli uses a different mechanism of phosphonate catabolism where PhnO is not essential and seems to play a regulatory role; Derived by automated computational analysis using gene prediction method: Protein Homology.; aminoalkylphosphonic acid N-acetyltransferase 4697643 17433373 P423_22795 Escherichia coli JJ1886 aminoalkylphosphonic acid N-acetyltransferase YP_008724487.1 4697209 R 1355100 CDS YP_008724488.1 556553920 17433374 complement(4697630..4698187) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ribose 1,5-bisphosphokinase 4698187 17433374 P423_22800 Escherichia coli JJ1886 ribose 1,5-bisphosphokinase YP_008724488.1 4697630 R 1355100 CDS YP_008724489.1 556553921 17433375 complement(4698187..4699323) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate metabolism protein PhnM 4699323 17433375 P423_22805 Escherichia coli JJ1886 phosphonate metabolism protein PhnM YP_008724489.1 4698187 R 1355100 CDS YP_008724490.1 556554954 17433376 complement(4699320..4700000) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphonate ABC transporter ATP-binding protein 4700000 17433376 P423_22810 Escherichia coli JJ1886 phosphonate ABC transporter ATP-binding protein YP_008724490.1 4699320 R 1355100 CDS YP_008724491.1 556554955 17433377 complement(4700111..4700869) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; phosphonate C-P lyase 4700869 phnK 17433377 phnK Escherichia coli JJ1886 phosphonate C-P lyase YP_008724491.1 4700111 R 1355100 CDS YP_008724492.1 556553922 17433378 complement(4700866..4701711) 1 NC_022648.1 required for use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon-phosphorus lyase complex subunit PhnJ 4701711 17433378 P423_22820 Escherichia coli JJ1886 carbon-phosphorus lyase complex subunit PhnJ YP_008724492.1 4700866 R 1355100 CDS YP_008724493.1 556553923 17433379 complement(4701704..4702768) 1 NC_022648.1 required for the use of phosphonate and phosphite; Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon-phosphorus lyase complex subunit PhnI 4702768 17433379 P423_22825 Escherichia coli JJ1886 carbon-phosphorus lyase complex subunit PhnI YP_008724493.1 4701704 R 1355100 CDS YP_008724494.1 556553924 17433380 complement(4702768..4703352) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate C-P lyase system protein PhnH 4703352 phnH 17433380 phnH Escherichia coli JJ1886 phosphonate C-P lyase system protein PhnH YP_008724494.1 4702768 R 1355100 CDS YP_008724495.1 556553925 17433381 complement(4703349..4703801) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate C-P lyase system protein PhnG 4703801 17433381 P423_22835 Escherichia coli JJ1886 phosphonate C-P lyase system protein PhnG YP_008724495.1 4703349 R 1355100 CDS YP_008724496.1 556553926 17433382 complement(4703802..4704527) 1 NC_022648.1 may be involved in phosphonate uptake and biodegradation; Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 4704527 17433382 P423_22840 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008724496.1 4703802 R 1355100 CDS YP_008724497.1 556553927 17433383 complement(4704548..4705327) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate ABC transporter permease 4705327 17433383 P423_22845 Escherichia coli JJ1886 phosphonate ABC transporter permease YP_008724497.1 4704548 R 1355100 CDS YP_008724498.1 556553928 17433384 complement(4705432..4706448) 1 NC_022648.1 with PhnCE is involved in the transport of phosphonates; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate ABC transporter substrate-binding protein 4706448 17433384 P423_22850 Escherichia coli JJ1886 phosphonate ABC transporter substrate-binding protein YP_008724498.1 4705432 R 1355100 CDS YP_008724499.1 556553929 17433385 complement(4706473..4707261) 1 NC_022648.1 similar to ATP-binding component of ABC transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; glutamine ABC transporter ATP-binding protein 4707261 glnQ 17433385 glnQ Escherichia coli JJ1886 glutamine ABC transporter ATP-binding protein YP_008724499.1 4706473 R 1355100 CDS YP_008724500.1 556553930 17433386 complement(4707394..4707837) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4707837 17433386 P423_22860 Escherichia coli JJ1886 hypothetical protein YP_008724500.1 4707394 R 1355100 CDS YP_008724501.1 556553931 17433387 complement(4707997..4708410) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4708410 17433387 P423_22865 Escherichia coli JJ1886 hypothetical protein YP_008724501.1 4707997 R 1355100 CDS YP_008724502.1 556553932 17433388 4708735..4710963 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4710963 17433388 P423_22870 Escherichia coli JJ1886 hypothetical protein YP_008724502.1 4708735 D 1355100 CDS YP_008724503.1 556553933 17433389 4710960..4711838 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4711838 17433389 P423_22875 Escherichia coli JJ1886 hypothetical protein YP_008724503.1 4710960 D 1355100 CDS YP_008724504.1 556553934 17433390 4712102..4713604 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; proline/glycine betaine transporter 4713604 17433390 P423_22880 Escherichia coli JJ1886 proline/glycine betaine transporter YP_008724504.1 4712102 D 1355100 CDS YP_008724505.1 556554956 17433391 4713716..4713805 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4713805 17433391 P423_22885 Escherichia coli JJ1886 membrane protein YP_008724505.1 4713716 D 1355100 CDS YP_008724506.1 556553935 17433392 complement(4713781..4714881) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sensor protein BasS/PmrB 4714881 17433392 P423_22890 Escherichia coli JJ1886 sensor protein BasS/PmrB YP_008724506.1 4713781 R 1355100 CDS YP_008724507.1 556553936 17433393 complement(4714882..4715550) 1 NC_022648.1 response regulator in two-component regulatory system with BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4715550 17433393 P423_22895 Escherichia coli JJ1886 transcriptional regulator YP_008724507.1 4714882 R 1355100 CDS YP_008724508.1 556553937 17433394 complement(4715547..4717190) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; metal dependent hydrolase 4717190 17433394 P423_22900 Escherichia coli JJ1886 metal dependent hydrolase YP_008724508.1 4715547 R 1355100 CDS YP_008724509.1 556553938 17433395 complement(4717294..4718631) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine:agmatine antiporter 4718631 17433395 P423_22905 Escherichia coli JJ1886 arginine:agmatine antiporter YP_008724509.1 4717294 R 1355100 CDS YP_008724510.1 556553939 17433396 complement(4718768..4719529) 1 NC_022648.1 regulates genes involved in arginine decarboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4719529 17433396 P423_22910 Escherichia coli JJ1886 transcriptional regulator YP_008724510.1 4718768 R 1355100 CDS YP_008724511.1 556553940 17433397 complement(4719865..4722135) 1 NC_022648.1 biodegradative; catalyzes the formation of agmatine from arginine; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine decarboxylase 4722135 17433397 P423_22915 Escherichia coli JJ1886 arginine decarboxylase YP_008724511.1 4719865 R 1355100 CDS YP_008724512.1 556553941 17433398 complement(4722331..4723239) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4723239 17433398 P423_22920 Escherichia coli JJ1886 transcriptional regulator YP_008724512.1 4722331 R 1355100 CDS YP_008724513.1 556553942 17433399 4723522..4724877 1 NC_022648.1 catalyses the hydrolysis of terminal non-reducing alpha-D-galactose residues in alpha-D-galactosides; Derived by automated computational analysis using gene prediction method: Protein Homology.; alpha-galactosidase 4724877 17433399 P423_22925 Escherichia coli JJ1886 alpha-galactosidase YP_008724513.1 4723522 D 1355100 CDS YP_008724514.1 556553943 17433400 complement(4724874..4725524) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4725524 17433400 P423_22930 Escherichia coli JJ1886 membrane protein YP_008724514.1 4724874 R 1355100 CDS YP_008724515.1 556553944 17433401 complement(4725647..4727293) 1 NC_022648.1 catalyzes the formation of malate from fumerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate hydratase 4727293 17433401 P423_22935 Escherichia coli JJ1886 fumarate hydratase YP_008724515.1 4725647 R 1355100 CDS YP_008724516.1 556553945 17433402 complement(4727371..4728711) 1 NC_022648.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to DcuA; DcuA and DcuB function as independent and mutually redundant C4-dicarboxylate (aspartate, malate, fumarate and succinate) transporters; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 4728711 17433402 P423_22940 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter YP_008724516.1 4727371 R 1355100 CDS YP_008724517.1 556553946 17433403 complement(4729282..4730001) 1 NC_022648.1 response regulator in two-component regulatory system with DcuS; phosphorylated DcuR activates transcription of genes involved in anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4730001 17433403 P423_22945 Escherichia coli JJ1886 transcriptional regulator YP_008724517.1 4729282 R 1355100 CDS YP_008724518.1 556553947 17433404 complement(4729998..4731629) 1 NC_022648.1 C4-dicarboxylate-sensing histidine kinase; part of two-component regulatory system with DcuR; regulates anaerobic fumarate respiration; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 4731629 17433404 P423_22950 Escherichia coli JJ1886 sensory histidine kinase YP_008724518.1 4729998 R 1355100 CDS YP_008724519.1 556553948 17433405 4731810..4732040 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4732040 17433405 P423_22955 Escherichia coli JJ1886 hypothetical protein YP_008724519.1 4731810 D 1355100 CDS YP_008724520.1 556553949 17433406 4732052..4732324 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4732324 17433406 P423_22960 Escherichia coli JJ1886 hypothetical protein YP_008724520.1 4732052 D 1355100 CDS YP_008724521.1 556554957 17433407 complement(4732434..4734746) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; outer membrane usher protein LpfC 4734746 17433407 P423_22965 Escherichia coli JJ1886 outer membrane usher protein LpfC YP_008724521.1 4732434 R 1355100 CDS YP_008724522.1 556554958 17433408 complement(4735004..4735696) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4735696 17433408 P423_22970 Escherichia coli JJ1886 hypothetical protein YP_008724522.1 4735004 R 1355100 CDS YP_008724523.1 556554959 17433409 complement(4735761..4736285) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4736285 17433409 P423_22975 Escherichia coli JJ1886 hypothetical protein YP_008724523.1 4735761 R 1355100 CDS YP_008724524.1 556554960 17433410 4736686..4740498 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; serine protease pic autotransporter 4740498 17433410 P423_22980 Escherichia coli JJ1886 serine protease pic autotransporter YP_008724524.1 4736686 D 1355100 CDS YP_008724525.1 556554961 17433411 4741396..4742226 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; AraC family transcriptional regulator 4742226 17433411 P423_22985 Escherichia coli JJ1886 AraC family transcriptional regulator YP_008724525.1 4741396 D 1355100 CDS YP_008724526.1 556554962 17433412 4743547..4747311 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; autotransporter 4747311 17433412 P423_22990 Escherichia coli JJ1886 autotransporter YP_008724526.1 4743547 D 1355100 CDS YP_008724527.1 556553950 17433413 4747525..4747797 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4747797 17433413 P423_22995 Escherichia coli JJ1886 hypothetical protein YP_008724527.1 4747525 D 1355100 CDS YP_008724528.1 556554963 17433414 4747883..4747978 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4747978 17433414 P423_23000 Escherichia coli JJ1886 hypothetical protein YP_008724528.1 4747883 D 1355100 CDS YP_008724529.1 556553951 17433415 4748025..4748321 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4748321 17433415 P423_23005 Escherichia coli JJ1886 hypothetical protein YP_008724529.1 4748025 D 1355100 CDS YP_008724530.1 556553952 17433416 4748349..4748522 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4748522 17433416 P423_23010 Escherichia coli JJ1886 hypothetical protein YP_008724530.1 4748349 D 1355100 CDS YP_008724531.1 556553953 17433417 complement(4748641..4750158) 1 NC_022648.1 class II; LysRS2; catalyzes a two-step reaction, first charging a lysine molecule by linking its carboxyl group to the alpha-phosphate of ATP, followed by transfer of the aminoacyl-adenylate to its tRNA; in Methanosarcina barkeri, LysRS2 charges both tRNA molecules for lysine that exist in this organism and in addition can charge the tRNAPyl with lysine in the presence of LysRS1; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysyl-tRNA synthetase 4750158 lysS 17433417 lysS Escherichia coli JJ1886 lysyl-tRNA synthetase YP_008724531.1 4748641 R 1355100 CDS YP_008724532.1 556553954 17433418 complement(4750395..4751852) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; peptide permease 4751852 17433418 P423_23020 Escherichia coli JJ1886 peptide permease YP_008724532.1 4750395 R 1355100 CDS YP_008724533.1 556553955 17433419 complement(4751911..4754058) 1 NC_022648.1 constitutive; catalyzes the formation of cadaverine from lysine; Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine decarboxylase CadA 4754058 17433419 P423_23025 Escherichia coli JJ1886 lysine decarboxylase CadA YP_008724533.1 4751911 R 1355100 CDS YP_008724534.1 556553956 17433420 complement(4754138..4755472) 1 NC_022648.1 antiporter protein responsible for lysine import and cadaverine export; member of the lysine-dependent acid resistance system 4 (AR4); inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; arginine:agmatine antiporter 4755472 cadB 17433420 cadB Escherichia coli JJ1886 arginine:agmatine antiporter YP_008724534.1 4754138 R 1355100 CDS YP_008724535.1 556553957 17433421 complement(4755838..4757376) 1 NC_022648.1 regulates the cadBA operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4757376 17433421 P423_23035 Escherichia coli JJ1886 transcriptional regulator YP_008724535.1 4755838 R 1355100 CDS YP_008724536.1 556553958 17433423 complement(4758175..4758750) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4758750 17433423 P423_23045 Escherichia coli JJ1886 transcriptional regulator YP_008724536.1 4758175 R 1355100 CDS YP_008724537.1 556553959 17433424 complement(4758787..4760484) 1 NC_022648.1 two electrons are transferred from cytoplasmic NADPH to thioredoxin and then to the inner membrane protein DsbD which keeps the disulfide isomerase DsbC in a reduced state in the oxidizing periplasm; DsbC in turns rearranges incorrectly made disulfide bonds in the periplasm; Derived by automated computational analysis using gene prediction method: Protein Homology.; thiol:disulfide interchange protein 4760484 dipZ 17433424 dipZ Escherichia coli JJ1886 thiol:disulfide interchange protein YP_008724537.1 4758787 R 1355100 CDS YP_008724538.1 556553960 17433425 complement(4760460..4760798) 1 NC_022648.1 copper binding protein required for copper tolerance; involved in resistance toward heavy metals; Derived by automated computational analysis using gene prediction method: Protein Homology.; divalent ion tolerance protein CutA 4760798 17433425 P423_23055 Escherichia coli JJ1886 divalent ion tolerance protein CutA YP_008724538.1 4760460 R 1355100 CDS YP_008724539.1 556553961 17433426 complement(4760914..4762215) 1 NC_022648.1 functions in anaerobic transport of C4-dicarboxylate compounds such as fumarate; similar to dcuB; Derived by automated computational analysis using gene prediction method: Protein Homology.; C4-dicarboxylate ABC transporter 4762215 17433426 P423_23060 Escherichia coli JJ1886 C4-dicarboxylate ABC transporter YP_008724539.1 4760914 R 1355100 CDS YP_008724540.1 556553962 17433427 complement(4762333..4763769) 1 NC_022648.1 catalyzes the formation of fumarate from aspartate; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate ammonia-lyase 4763769 aspA 17433427 aspA Escherichia coli JJ1886 aspartate ammonia-lyase YP_008724540.1 4762333 R 1355100 CDS YP_008724541.1 556553963 17433428 4764106..4764582 1 NC_022648.1 F exclusion of bacteriophage T7; overproduction of this protein in Escherichia coli inhibits the F plasmid-mediated exclusion of bacteriophage T7; interacts with the F plasmid-encoded PifA protein; inner membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; exclusion suppressor FxsA 4764582 fxsA 17433428 fxsA Escherichia coli JJ1886 exclusion suppressor FxsA YP_008724541.1 4764106 D 1355100 CDS YP_008724542.1 556553964 17433429 complement(4764598..4765854) 1 NC_022648.1 uncharacterized member of the APC superfamily of amino acid transporters; unknown function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4765854 17433429 P423_23075 Escherichia coli JJ1886 transporter YP_008724542.1 4764598 R 1355100 CDS YP_008724543.1 556553965 17433430 4766130..4766423 1 NC_022648.1 10 kDa chaperonin; Cpn10; GroES; forms homoheptameric ring; binds to one or both ends of the GroEL double barrel in the presence of adenine nucleotides capping it; folding of unfolded substrates initiates in a GroEL-substrate bound and capped by GroES; release of the folded substrate is dependent on ATP binding and hydrolysis in the trans ring; Derived by automated computational analysis using gene prediction method: Protein Homology.; co-chaperonin GroES 4766423 groES 17433430 groES Escherichia coli JJ1886 co-chaperonin GroES YP_008724543.1 4766130 D 1355100 CDS YP_008724544.1 556553966 17433431 4766467..4768113 1 NC_022648.1 60 kDa chaperone family; promotes refolding of misfolded polypeptides especially under stressful conditions; forms two stacked rings of heptamers to form a barrel-shaped 14mer; ends can be capped by GroES; misfolded proteins enter the barrel where they are refolded when GroES binds; many bacteria have multiple copies of the groEL gene which are active under different environmental conditions; the B.japonicum protein in this cluster is expressed constitutively; in Rhodobacter, Corynebacterium and Rhizobium this protein is essential for growth; Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone GroEL 4768113 groEL 17433431 groEL Escherichia coli JJ1886 molecular chaperone GroEL YP_008724544.1 4766467 D 1355100 CDS YP_008724545.1 556553967 17433432 4768251..4768604 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4768604 17433432 P423_23090 Escherichia coli JJ1886 membrane protein YP_008724545.1 4768251 D 1355100 CDS YP_008724546.1 556553968 17433433 complement(4768654..4769523) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4769523 17433433 P423_23095 Escherichia coli JJ1886 hypothetical protein YP_008724546.1 4768654 R 1355100 CDS YP_008724547.1 556553969 17433434 complement(4769758..4770786) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lysine 2,3-aminomutase 4770786 17433434 P423_23100 Escherichia coli JJ1886 lysine 2,3-aminomutase YP_008724547.1 4769758 R 1355100 CDS YP_008724548.1 556553970 17433435 4770828..4771394 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; elongation factor P 4771394 17433435 P423_23105 Escherichia coli JJ1886 elongation factor P YP_008724548.1 4770828 D 1355100 CDS YP_008724549.1 556553971 17433436 4771446..4771571 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; entericidin B membrane lipoprotein 4771571 17433436 P423_23110 Escherichia coli JJ1886 entericidin B membrane lipoprotein YP_008724549.1 4771446 D 1355100 CDS YP_008724550.1 556553972 17433437 4771682..4771828 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; entericidin B membrane lipoprotein 4771828 17433437 P423_23115 Escherichia coli JJ1886 entericidin B membrane lipoprotein YP_008724550.1 4771682 D 1355100 CDS YP_008724551.1 556554964 17433438 4772004..4772321 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4772321 17433438 P423_23120 Escherichia coli JJ1886 hypothetical protein YP_008724551.1 4772004 D 1355100 CDS YP_008724552.1 556553973 17433439 complement(4772318..4772851) 1 NC_022648.1 lipocalin; globomycin-sensitive outer membrane lipoprotein; Derived by automated computational analysis using gene prediction method: Protein Homology.; outer membrane lipoprotein Blc 4772851 17433439 P423_23125 Escherichia coli JJ1886 outer membrane lipoprotein Blc YP_008724552.1 4772318 R 1355100 CDS YP_008724553.1 556553974 17433440 complement(4772940..4774073) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; beta-lactamase 4774073 17433440 P423_23130 Escherichia coli JJ1886 beta-lactamase YP_008724553.1 4772940 R 1355100 CDS YP_008724554.1 556553975 17433441 complement(4774136..4774495) 1 NC_022648.1 in conjunction with FrdC acts to anchor the catalytic components of the fumarate reductase to the cytoplasmic membrane; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase subunit D 4774495 17433441 P423_23135 Escherichia coli JJ1886 fumarate reductase subunit D YP_008724554.1 4774136 R 1355100 CDS YP_008724555.1 556553976 17433442 complement(4774506..4774901) 1 NC_022648.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase subunit C 4774901 17433442 P423_23140 Escherichia coli JJ1886 fumarate reductase subunit C YP_008724555.1 4774506 R 1355100 CDS YP_008724556.1 556553977 17433443 complement(4774912..4775646) 1 NC_022648.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase iron-sulfur subunit 4775646 17433443 P423_23145 Escherichia coli JJ1886 fumarate reductase iron-sulfur subunit YP_008724556.1 4774912 R 1355100 CDS YP_008724557.1 556553978 17433444 complement(4775639..4777447) 1 NC_022648.1 part of four member fumarate reductase enzyme complex FrdABCD which catalyzes the reduction of fumarate to succinate during anaerobic respiration; FrdAB are the catalytic subcomplex consisting of a flavoprotein subunit and an iron-sulfur subunit, respectively; FrdCD are the membrane components which interact with quinone and are involved in electron transfer; the catalytic subunits are similar to succinate dehydrogenase SdhAB; Derived by automated computational analysis using gene prediction method: Protein Homology.; fumarate reductase flavoprotein subunit 4777447 17433444 P423_23150 Escherichia coli JJ1886 fumarate reductase flavoprotein subunit YP_008724557.1 4775639 R 1355100 CDS YP_008724558.1 556554965 17433445 4777772..4778749 1 NC_022648.1 poxA; regulates pyruvate oxidase poxB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; lysyl-tRNA synthetase 4778749 17433445 P423_23155 Escherichia coli JJ1886 lysyl-tRNA synthetase YP_008724558.1 4777772 D 1355100 CDS YP_008724559.1 556553979 17433446 4778968..4780470 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; amino acid ABC transporter permease 4780470 17433446 P423_23160 Escherichia coli JJ1886 amino acid ABC transporter permease YP_008724559.1 4778968 D 1355100 CDS YP_008724560.1 556553980 17433447 4780568..4780882 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4780882 17433447 P423_23165 Escherichia coli JJ1886 membrane protein YP_008724560.1 4780568 D 1355100 CDS YP_008724561.1 556553981 17433448 complement(4780913..4784236) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mechanosensitive channel protein 4784236 17433448 P423_23170 Escherichia coli JJ1886 mechanosensitive channel protein YP_008724561.1 4780913 R 1355100 CDS YP_008724562.1 556553982 17433449 complement(4784258..4785226) 1 NC_022648.1 catalyzes the decarboxylation of phosphatidyl-L-serine to phosphatidylethanoleamine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphatidylserine decarboxylase 4785226 psd 17433449 psd Escherichia coli JJ1886 phosphatidylserine decarboxylase YP_008724562.1 4784258 R 1355100 CDS YP_008724563.1 556553983 17433450 complement(4785323..4786375) 1 NC_022648.1 EngC; RsgA; CpgA; circularly permuted GTPase; ribosome small subunit-dependent GTPase A; has the pattern G4-G1-G3 as opposed to other GTPases; interacts strongly with 30S ribosome which stimulates GTPase activity; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase RsgA 4786375 17433450 P423_23180 Escherichia coli JJ1886 GTPase RsgA YP_008724563.1 4785323 R 1355100 CDS YP_008724564.1 556553984 17433451 4786470..4787015 1 NC_022648.1 3'-5' exoribonuclease specific for small oligoribonuclotides; Derived by automated computational analysis using gene prediction method: Protein Homology.; oligoribonuclease 4787015 17433451 P423_23185 Escherichia coli JJ1886 oligoribonuclease YP_008724564.1 4786470 D 1355100 CDS YP_008724565.1 556553985 17433455 complement(4787794..4788933) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster binding protein 4788933 17433455 P423_23205 Escherichia coli JJ1886 iron-sulfur cluster binding protein YP_008724565.1 4787794 R 1355100 CDS YP_008724566.1 556553986 17433456 4788932..4790479 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbohydrate kinase 4790479 17433456 P423_23210 Escherichia coli JJ1886 carbohydrate kinase YP_008724566.1 4788932 D 1355100 CDS YP_008724567.1 556553987 17433457 4790451..4790912 1 NC_022648.1 needed for nucleoid integrity; possibly involved in cell wall synthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; ADP-binding protein 4790912 17433457 P423_23215 Escherichia coli JJ1886 ADP-binding protein YP_008724567.1 4790451 D 1355100 CDS YP_008724568.1 556553988 17433458 4790931..4792262 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylmuramoyl-L-alanine amidase 4792262 17433458 P423_23220 Escherichia coli JJ1886 N-acetylmuramoyl-L-alanine amidase YP_008724568.1 4790931 D 1355100 CDS YP_008724569.1 556553989 17433459 4792272..4794119 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA mismatch repair protein 4794119 17433459 P423_23225 Escherichia coli JJ1886 DNA mismatch repair protein YP_008724569.1 4792272 D 1355100 CDS YP_008724570.1 556553990 17433460 4794112..4795062 1 NC_022648.1 IPP transferase; isopentenyltransferase; involved in tRNA modification; in Escherichia coli this enzyme catalyzes the addition of a delta2-isopentenyl group from dimethylallyl diphosphate to the N6-nitrogen of adenosine adjacent to the anticodon of tRNA species that read codons starting with uracil; further tRNA modifications may occur; mutations in miaA result in defects in translation efficiency and fidelity; Derived by automated computational analysis using gene prediction method: Protein Homology.; tRNA delta(2)-isopentenylpyrophosphate transferase 4795062 miaA 17433460 miaA Escherichia coli JJ1886 tRNA delta(2)-isopentenylpyrophosphate transferase YP_008724570.1 4794112 D 1355100 CDS YP_008724571.1 556553991 17433461 4795148..4795456 1 NC_022648.1 HF-I, host factor for RNA phage Q beta replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA-binding protein Hfq 4795456 hfq 17433461 hfq Escherichia coli JJ1886 RNA-binding protein Hfq YP_008724571.1 4795148 D 1355100 CDS YP_008724572.1 556553992 17433462 4795532..4796812 1 NC_022648.1 involved in modulation of proteins HflK and HflC; part of the hflA locus (high frequency of lysogenization) which governs the lysis-lysogeny decision of bacteriophage lambda by controlling stability of the phage cII protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; GTPase HflX 4796812 17433462 P423_23240 Escherichia coli JJ1886 GTPase HflX YP_008724572.1 4795532 D 1355100 CDS YP_008724573.1 556553993 17433463 4796898..4798157 1 NC_022648.1 with HflC inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsH 4798157 17433463 P423_23245 Escherichia coli JJ1886 cell division protein FtsH YP_008724573.1 4796898 D 1355100 CDS YP_008724574.1 556553994 17433464 4798160..4799164 1 NC_022648.1 with HflK inhibits proteolysis of lambda cII protein by FtsH; Derived by automated computational analysis using gene prediction method: Protein Homology.; cell division protein FtsH 4799164 17433464 P423_23250 Escherichia coli JJ1886 cell division protein FtsH YP_008724574.1 4798160 D 1355100 CDS YP_008724575.1 556553995 17433465 4799246..4799443 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4799443 17433465 P423_23255 Escherichia coli JJ1886 membrane protein YP_008724575.1 4799246 D 1355100 CDS YP_008724576.1 556553996 17433466 4799547..4800845 1 NC_022648.1 catalyzes the formation of N6-(1,2,-dicarboxyethyl)-AMP from L-aspartate, inosine monophosphate and GTP in AMP biosynthesis; Derived by automated computational analysis using gene prediction method: Protein Homology.; adenylosuccinate synthetase 4800845 17433466 P423_23260 Escherichia coli JJ1886 adenylosuccinate synthetase YP_008724576.1 4799547 D 1355100 CDS YP_008724577.1 556553997 17433467 4801050..4801475 1 NC_022648.1 negatively regulates the transcription of genes upregulated by nitrosative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4801475 17433467 P423_23265 Escherichia coli JJ1886 transcriptional regulator YP_008724577.1 4801050 D 1355100 CDS YP_008724578.1 556553998 17433468 4801514..4803955 1 NC_022648.1 3'-5'exoribonuclease that acts nonspecifically on poly(A), poly(U) and ribosomal RNAs; Derived by automated computational analysis using gene prediction method: Protein Homology.; exoribonuclease R 4803955 17433468 P423_23270 Escherichia coli JJ1886 exoribonuclease R YP_008724578.1 4801514 D 1355100 CDS YP_008724579.1 556553999 17433469 4804046..4804777 1 NC_022648.1 Specifically methylates the ribose of guanosine 2251 in 23S rRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; 23S rRNA (guanosine-2'-O-)-methyltransferase 4804777 17433469 P423_23275 Escherichia coli JJ1886 23S rRNA (guanosine-2'-O-)-methyltransferase YP_008724579.1 4804046 D 1355100 CDS YP_008724580.1 556554000 17433470 4804904..4805305 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4805305 17433470 P423_23280 Escherichia coli JJ1886 hypothetical protein YP_008724580.1 4804904 D 1355100 CDS YP_008724581.1 556554001 17433471 4805324..4806022 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4806022 17433471 P423_23285 Escherichia coli JJ1886 hypothetical protein YP_008724581.1 4805324 D 1355100 CDS YP_008724582.1 556554002 17433472 4806072..4806731 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4806731 17433472 P423_23290 Escherichia coli JJ1886 hypothetical protein YP_008724582.1 4806072 D 1355100 CDS YP_008724583.1 556554003 17433473 4806749..4807147 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4807147 17433473 P423_23295 Escherichia coli JJ1886 membrane protein YP_008724583.1 4806749 D 1355100 CDS YP_008724584.1 556554004 17433474 4807157..4807795 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4807795 17433474 P423_23300 Escherichia coli JJ1886 membrane protein YP_008724584.1 4807157 D 1355100 CDS YP_008724585.1 556554005 17433475 4807798..4808961 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4808961 17433475 P423_23305 Escherichia coli JJ1886 hypothetical protein YP_008724585.1 4807798 D 1355100 CDS YP_008724586.1 556554006 17433476 4809045..4810670 1 NC_022648.1 catalyzes the formation of 3-methylcrotonyl-CoA from isovaleryl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology.; isovaleryl CoA dehydrogenase 4810670 17433476 P423_23310 Escherichia coli JJ1886 isovaleryl CoA dehydrogenase YP_008724586.1 4809045 D 1355100 CDS YP_008724587.1 556554007 17433477 complement(4810787..4811062) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4811062 17433477 P423_23315 Escherichia coli JJ1886 hypothetical protein YP_008724587.1 4810787 R 1355100 CDS YP_008724588.1 556554008 17433478 complement(4811211..4811540) 1 NC_022648.1 in Escherichia coli, mutation of this gene affects biofilm maturation, stress response, and motility; Derived by automated computational analysis using gene prediction method: Protein Homology.; biofilm stress and motility protein A 4811540 17433478 P423_23320 Escherichia coli JJ1886 biofilm stress and motility protein A YP_008724588.1 4811211 R 1355100 CDS YP_008724589.1 556554009 17433479 4811722..4812471 1 NC_022648.1 YjfP; esterase activity towards palmitoyl-CoA and pNP-butyrate in vitro; unknown function and substrate in vivo; Derived by automated computational analysis using gene prediction method: Protein Homology.; esterase 4812471 17433479 P423_23325 Escherichia coli JJ1886 esterase YP_008724589.1 4811722 D 1355100 CDS YP_008724590.1 556554010 17433480 complement(4812468..4813223) 1 NC_022648.1 negative regulator of ulaG and ulaABCDEF; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4813223 17433480 P423_23330 Escherichia coli JJ1886 transcriptional regulator YP_008724590.1 4812468 R 1355100 CDS YP_008724591.1 556554011 17433481 complement(4813331..4814395) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ascorbate 6-phosphate lactonase 4814395 17433481 P423_23335 Escherichia coli JJ1886 L-ascorbate 6-phosphate lactonase YP_008724591.1 4813331 R 1355100 CDS YP_008724592.1 556554012 17433482 4814750..4816147 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS ascorbate transporter subunit IIC 4816147 17433482 P423_23340 Escherichia coli JJ1886 PTS ascorbate transporter subunit IIC YP_008724592.1 4814750 D 1355100 CDS YP_008724593.1 556554013 17433483 4816163..4816468 1 NC_022648.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS ascorbate transporter subunit IIB 4816468 17433483 P423_23345 Escherichia coli JJ1886 PTS ascorbate transporter subunit IIB YP_008724593.1 4816163 D 1355100 CDS YP_008724594.1 556554014 17433484 4816478..4816942 1 NC_022648.1 involved in the phosphorylation and transport of sugars across the cell membrane; protein IIA transfers a phosphoryl group to IIB which then transfers the phosphoryl group to the sugar; IIC forms the translocation channel for the sugar uptake; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS ascorbate transporter subunit IIA 4816942 17433484 P423_23350 Escherichia coli JJ1886 PTS ascorbate transporter subunit IIA YP_008724594.1 4816478 D 1355100 CDS YP_008724595.1 556554015 17433485 4816956..4817606 1 NC_022648.1 catalyzes the formation of L-xylulose-5-phosphate from 3-keto-L-gulonate-6-phosphate in anaerobic L-ascorbate utilization; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3-keto-L-gulonate-6-phosphate decarboxylase 4817606 ulaD 17433485 ulaD Escherichia coli JJ1886 3-keto-L-gulonate-6-phosphate decarboxylase YP_008724595.1 4816956 D 1355100 CDS YP_008724596.1 556554016 17433486 4817616..4818470 1 NC_022648.1 L-xylulose 5-phosphate 3-epimerase activity not yet demonstrated; may be involved in the utilization of 2,3-diketo-L-gulonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-xylulose 5-phosphate 3-epimerase 4818470 17433486 P423_23360 Escherichia coli JJ1886 L-xylulose 5-phosphate 3-epimerase YP_008724596.1 4817616 D 1355100 CDS YP_008724597.1 556554017 17433487 4818470..4819156 1 NC_022648.1 catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source; Derived by automated computational analysis using gene prediction method: Protein Homology.; L-ribulose-5-phosphate 4-epimerase 4819156 sgaE 17433487 sgaE Escherichia coli JJ1886 L-ribulose-5-phosphate 4-epimerase YP_008724597.1 4818470 D 1355100 CDS YP_008724598.1 556554018 17433488 complement(4819285..4819560) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4819560 17433488 P423_23370 Escherichia coli JJ1886 membrane protein YP_008724598.1 4819285 R 1355100 CDS YP_008724599.1 556554966 17433489 4819645..4819764 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4819764 17433489 P423_23375 Escherichia coli JJ1886 hypothetical protein YP_008724599.1 4819645 D 1355100 CDS YP_008724600.1 556554019 17433490 4819888..4820283 1 NC_022648.1 binds cooperatively with S18 to the S15-16S complex, allowing platform assembly to continue with S11 and S21; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S6 4820283 rpsF 17433490 rpsF Escherichia coli JJ1886 30S ribosomal protein S6 YP_008724600.1 4819888 D 1355100 CDS YP_008724601.1 556554967 17433491 4820437..4820604 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; primosomal replication protein N 4820604 17433491 P423_23385 Escherichia coli JJ1886 primosomal replication protein N YP_008724601.1 4820437 D 1355100 CDS YP_008724602.1 556554020 17433492 4820609..4820836 1 NC_022648.1 binds as a heterodimer with protein S6 to the central domain of the 16S rRNA; helps stabilize the platform of the 30S subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 30S ribosomal protein S18 4820836 rpsR 17433492 rpsR Escherichia coli JJ1886 30S ribosomal protein S18 YP_008724602.1 4820609 D 1355100 CDS YP_008724603.1 556554021 17433493 4820878..4821327 1 NC_022648.1 in Escherichia coli this protein is wrapped around the base of the L1 stalk; Derived by automated computational analysis using gene prediction method: Protein Homology.; 50S ribosomal protein L9 4821327 rplI 17433493 rplI Escherichia coli JJ1886 50S ribosomal protein L9 YP_008724603.1 4820878 D 1355100 CDS YP_008724604.1 556554968 17433494 4821927..4822220 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4822220 17433494 P423_23400 Escherichia coli JJ1886 hypothetical protein YP_008724604.1 4821927 D 1355100 CDS YP_008724605.1 556554969 17433495 4822223..4822729 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; toxin HipA 4822729 17433495 P423_23405 Escherichia coli JJ1886 toxin HipA YP_008724605.1 4822223 D 1355100 CDS YP_008724606.1 556554970 17433496 4822729..4823490 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; toxin HipA 4823490 17433496 P423_23410 Escherichia coli JJ1886 toxin HipA YP_008724606.1 4822729 D 1355100 CDS YP_008724607.1 556554022 17433497 complement(4823633..4824910) 1 NC_022648.1 involved in the transport of aldohexuronates; Derived by automated computational analysis using gene prediction method: Protein Homology.; hexuronate transporter ExuT 4824910 17433497 P423_23415 Escherichia coli JJ1886 hexuronate transporter ExuT YP_008724607.1 4823633 R 1355100 CDS YP_008724608.1 556554971 17433498 complement(4825003..4827075) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; oxidoreductase 4827075 17433498 P423_23420 Escherichia coli JJ1886 oxidoreductase YP_008724608.1 4825003 R 1355100 CDS YP_008724609.1 556554023 17433499 complement(4827072..4828613) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4828613 17433499 P423_23425 Escherichia coli JJ1886 hypothetical protein YP_008724609.1 4827072 R 1355100 CDS YP_008724610.1 556554972 17433500 complement(4828623..4829399) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; acyl-CoA hydratase 4829399 17433500 P423_23430 Escherichia coli JJ1886 acyl-CoA hydratase YP_008724610.1 4828623 R 1355100 CDS YP_008724611.1 556554973 17433501 complement(4829409..4830251) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; endonuclease 4830251 17433501 P423_23435 Escherichia coli JJ1886 endonuclease YP_008724611.1 4829409 R 1355100 CDS YP_008724612.1 556554974 17433502 complement(4830261..4831052) 1 NC_022648.1 catalyzes the first of the two reduction steps in the elongation cycle of fatty acid synthesis; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 3-ketoacyl-ACP reductase 4831052 17433502 P423_23440 Escherichia coli JJ1886 3-ketoacyl-ACP reductase YP_008724612.1 4830261 R 1355100 CDS YP_008724613.1 556554975 17433503 4831265..4831912 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; TetR family transcriptional regulator 4831912 17433503 P423_23445 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008724613.1 4831265 D 1355100 CDS YP_008724614.1 556554024 17433504 complement(4831896..4832534) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4832534 17433504 P423_23450 Escherichia coli JJ1886 hypothetical protein YP_008724614.1 4831896 R 1355100 CDS YP_008724615.1 556554025 17433505 4832753..4833373 1 NC_022648.1 FKBP-type; rotamase; catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidyl-prolyl cis-trans isomerase 4833373 17433505 P423_23455 Escherichia coli JJ1886 peptidyl-prolyl cis-trans isomerase YP_008724615.1 4832753 D 1355100 CDS YP_008724616.1 556554026 17433506 4833682..4835094 1 NC_022648.1 involved in the transport across the cytoplasmic membrane of D-alanine, D-serine and glycine; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine glycine permease 4835094 17433506 P423_23460 Escherichia coli JJ1886 alanine glycine permease YP_008724616.1 4833682 D 1355100 CDS YP_008724617.1 556554027 17433507 complement(4835139..4835801) 1 NC_022648.1 Involved in anaerobic NO protection and iron metabolism; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron-sulfur cluster repair di-iron protein 4835801 17433507 P423_23465 Escherichia coli JJ1886 iron-sulfur cluster repair di-iron protein YP_008724617.1 4835139 R 1355100 CDS YP_008724618.1 556554028 17433508 complement(4835909..4836874) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4836874 17433508 P423_23470 Escherichia coli JJ1886 membrane protein YP_008724618.1 4835909 R 1355100 CDS YP_008724619.1 556554029 17433509 complement(4836982..4837842) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; quinone oxidoreductase 4837842 17433509 P423_23475 Escherichia coli JJ1886 quinone oxidoreductase YP_008724619.1 4836982 R 1355100 CDS YP_008724620.1 556554030 17433510 4837931..4838311 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; HxlR family transcriptional regulator 4838311 17433510 P423_23480 Escherichia coli JJ1886 HxlR family transcriptional regulator YP_008724620.1 4837931 D 1355100 CDS YP_008724621.1 556554031 17433511 complement(4838440..4840383) 1 NC_022648.1 periplasmic enzyme; functions during ribonucleic acid degradation; 2',3'-cyclic nucleotides are first converted to 3'-nucleotide and then cleaved to yield a ribonucleotide and a phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3'-nucleotidase 4840383 cpdB 17433511 cpdB Escherichia coli JJ1886 3'-nucleotidase YP_008724621.1 4838440 R 1355100 CDS YP_008724622.1 556554032 17433512 4840573..4841313 1 NC_022648.1 catalyzes the formation of AMP from adenosine-3',5'-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; 3'-5'-bisphosphate nucleotidase 4841313 17433512 P423_23490 Escherichia coli JJ1886 3'-5'-bisphosphate nucleotidase YP_008724622.1 4840573 D 1355100 CDS YP_008724623.1 556554033 17433513 complement(4841303..4841860) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4841860 17433513 P423_23495 Escherichia coli JJ1886 hypothetical protein YP_008724623.1 4841303 R 1355100 CDS YP_008724624.1 556554034 17433514 4842185..4842391 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4842391 17433514 P423_23500 Escherichia coli JJ1886 hypothetical protein YP_008724624.1 4842185 D 1355100 CDS YP_008724625.1 556554035 17433515 complement(4842453..4843796) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4843796 17433515 P423_23505 Escherichia coli JJ1886 membrane protein YP_008724625.1 4842453 R 1355100 CDS YP_008724626.1 556554036 17433517 complement(4844119..4844757) 1 NC_022648.1 this stereospecific enzymes reduces the S isomer of methionine sulfoxide while MsrB reduces the R form; provides protection against oxidative stress; Derived by automated computational analysis using gene prediction method: Protein Homology.; methionine sulfoxide reductase A 4844757 17433517 P423_23515 Escherichia coli JJ1886 methionine sulfoxide reductase A YP_008724626.1 4844119 R 1355100 CDS YP_008724627.1 556554037 17433518 4844963..4846696 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 4846696 17433518 P423_23520 Escherichia coli JJ1886 membrane protein YP_008724627.1 4844963 D 1355100 CDS YP_008724628.1 556554038 17433519 4846693..4850472 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4850472 17433519 P423_23525 Escherichia coli JJ1886 hypothetical protein YP_008724628.1 4846693 D 1355100 CDS YP_008724629.1 556554039 17433520 4850475..4850816 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; gamma-glutamylcyclotransferase 4850816 17433520 P423_23530 Escherichia coli JJ1886 gamma-glutamylcyclotransferase YP_008724629.1 4850475 D 1355100 CDS YP_008724630.1 556554040 17433521 4851028..4851279 1 NC_022648.1 part of the toxin-antitoxin ChpB-ChpS system; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 4851279 17433521 P423_23535 Escherichia coli JJ1886 antitoxin YP_008724630.1 4851028 D 1355100 CDS YP_008724631.1 556554041 17433522 4851273..4851623 1 NC_022648.1 toxin of the ChpB-ChpS toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin B 4851623 17433522 P423_23540 Escherichia coli JJ1886 toxin B YP_008724631.1 4851273 D 1355100 CDS YP_008724632.1 556554042 17433523 complement(4851703..4852233) 1 NC_022648.1 catalyzes the hydrolysis of pyrophosphate to phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; inorganic pyrophosphatase 4852233 17433523 P423_23545 Escherichia coli JJ1886 inorganic pyrophosphatase YP_008724632.1 4851703 R 1355100 CDS YP_008724633.1 556554043 17433524 4852543..4853499 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter substrate-binding protein 4853499 17433524 P423_23550 Escherichia coli JJ1886 sugar ABC transporter substrate-binding protein YP_008724633.1 4852543 D 1355100 CDS YP_008724634.1 556554044 17433525 4853639..4855141 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter ATP-binding protein 4855141 17433525 P423_23555 Escherichia coli JJ1886 sugar ABC transporter ATP-binding protein YP_008724634.1 4853639 D 1355100 CDS YP_008724635.1 556554045 17433526 4855155..4856177 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 4856177 17433526 P423_23560 Escherichia coli JJ1886 sugar ABC transporter permease YP_008724635.1 4855155 D 1355100 CDS YP_008724636.1 556554046 17433527 4856164..4857159 1 NC_022648.1 membrane component of a putative sugar ABC transporter system; Derived by automated computational analysis using gene prediction method: Protein Homology.; sugar ABC transporter permease 4857159 17433527 P423_23565 Escherichia coli JJ1886 sugar ABC transporter permease YP_008724636.1 4856164 D 1355100 CDS YP_008724637.1 556554047 17433528 complement(4857192..4858190) 1 NC_022648.1 catalyzes the formation of D-fructose 6-phosphate from fructose-1,6-bisphosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fructose-1,6-bisphosphatase 4858190 17433528 P423_23570 Escherichia coli JJ1886 fructose-1,6-bisphosphatase YP_008724637.1 4857192 R 1355100 CDS YP_008724638.1 556554048 17433529 4858366..4859739 1 NC_022648.1 ligates L-alanyl-gamma-D-glutamyl-meso-diaminopimelate to UDP-N-acetylmuramic acid for reincorporation into peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase 4859739 17433529 P423_23575 Escherichia coli JJ1886 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase YP_008724638.1 4858366 D 1355100 CDS YP_008724639.1 556554049 17433530 complement(4859890..4860441) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4860441 17433530 P423_23580 Escherichia coli JJ1886 hypothetical protein YP_008724639.1 4859890 R 1355100 CDS YP_008724640.1 556554050 17433531 4860535..4861887 1 NC_022648.1 protease involved in proteolytic processing of the antibiotic Microcin B17 and in sensitivity to the DNA gyrase inhibitor LetD; Derived by automated computational analysis using gene prediction method: Protein Homology.; peptidase PmbA 4861887 pmbA 17433531 pmbA Escherichia coli JJ1886 peptidase PmbA YP_008724640.1 4860535 D 1355100 CDS YP_008724641.1 556554976 17433532 4862070..4862456 1 NC_022648.1 electron transport protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; cytochrome B562 4862456 17433532 P423_23590 Escherichia coli JJ1886 cytochrome B562 YP_008724641.1 4862070 D 1355100 CDS YP_008724642.1 556554051 17433533 complement(4862501..4862965) 1 NC_022648.1 activates anaerobic ribonucleoside-triphosphate reductase under anaerobic conditions; Derived by automated computational analysis using gene prediction method: Protein Homology.; anaerobic ribonucleotide reductase-activating protein 4862965 17433533 P423_23595 Escherichia coli JJ1886 anaerobic ribonucleotide reductase-activating protein YP_008724642.1 4862501 R 1355100 CDS YP_008724643.1 556554052 17433534 complement(4863124..4865262) 1 NC_022648.1 Catalyzes the reduction of nucleoside 5'-triphosphates to 2'-deoxynucleoside 5'-triphosphates; Derived by automated computational analysis using gene prediction method: Protein Homology.; ribonucleoside triphosphate reductase 4865262 17433534 P423_23600 Escherichia coli JJ1886 ribonucleoside triphosphate reductase YP_008724643.1 4863124 R 1355100 CDS YP_008724644.1 556554053 17433535 complement(4865656..4867311) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose-6-phosphate hydrolase 4867311 17433535 P423_23605 Escherichia coli JJ1886 trehalose-6-phosphate hydrolase YP_008724644.1 4865656 R 1355100 CDS YP_008724645.1 556554054 17433536 complement(4867361..4868779) 1 NC_022648.1 phosphoenolpyruvate-dependent sugar phosphotransferase system; catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane; IIB is phosphorylated by IIA and then transfers the phosphoryl group to the sugar; IIC forms the translocation channel; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS maltose transporter subunit IIBC 4868779 17433536 P423_23610 Escherichia coli JJ1886 PTS maltose transporter subunit IIBC YP_008724645.1 4867361 R 1355100 CDS YP_008724646.1 556554055 17433537 complement(4868901..4869848) 1 NC_022648.1 regulates genes involved in trehalose metabolism; binds the intermediate trehalose-6-phosphate; binds a dimer; regulates treBC operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; trehalose repressor 4869848 treR 17433537 treR Escherichia coli JJ1886 trehalose repressor YP_008724646.1 4868901 R 1355100 CDS YP_008724647.1 556554056 17433538 4870227..4872923 1 NC_022648.1 P-type ATPase involved in magnesium influx; Derived by automated computational analysis using gene prediction method: Protein Homology.; magnesium-transporting ATPase 4872923 17433538 P423_23620 Escherichia coli JJ1886 magnesium-transporting ATPase YP_008724647.1 4870227 D 1355100 CDS YP_008724648.1 556554057 17433539 complement(4873004..4873105) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4873105 17433539 P423_23625 Escherichia coli JJ1886 hypothetical protein YP_008724648.1 4873004 R 1355100 CDS YP_008724649.1 556554058 17433540 complement(4873129..4873515) 1 NC_022648.1 has endoribonuclease activity on mRNA; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease L-PSP 4873515 17433540 P423_23630 Escherichia coli JJ1886 endoribonuclease L-PSP YP_008724649.1 4873129 R 1355100 CDS YP_008724650.1 556554059 17433541 complement(4873588..4874049) 1 NC_022648.1 involved in the allosteric regulation of aspartate carbamoyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate carbamoyltransferase regulatory subunit 4874049 17433541 P423_23635 Escherichia coli JJ1886 aspartate carbamoyltransferase regulatory subunit YP_008724650.1 4873588 R 1355100 CDS YP_008724651.1 556554060 17433542 complement(4874062..4874997) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aspartate carbamoyltransferase catalytic subunit 4874997 17433542 P423_23640 Escherichia coli JJ1886 aspartate carbamoyltransferase catalytic subunit YP_008724651.1 4874062 R 1355100 CDS YP_008724652.1 556554977 17433543 complement(4875168..4875311) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4875311 17433543 P423_23645 Escherichia coli JJ1886 hypothetical protein YP_008724652.1 4875168 R 1355100 CDS YP_008724653.1 556554061 17433544 complement(4875416..4875811) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; mRNA endoribonuclease 4875811 17433544 P423_23650 Escherichia coli JJ1886 mRNA endoribonuclease YP_008724653.1 4875416 R 1355100 CDS YP_008724654.1 556554062 17433545 complement(4875942..4876655) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; oxidoreductase 4876655 17433545 P423_23655 Escherichia coli JJ1886 oxidoreductase YP_008724654.1 4875942 R 1355100 CDS YP_008724655.1 556554063 17433546 4876726..4877319 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; TetR family transcriptional regulator 4877319 17433546 P423_23660 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008724655.1 4876726 D 1355100 CDS YP_008724656.1 556554978 17433547 4877319..4877447 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4877447 17433547 P423_23665 Escherichia coli JJ1886 hypothetical protein YP_008724656.1 4877319 D 1355100 CDS YP_008724657.1 556554064 17433548 4877464..4877916 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Toxin-antitoxin biofilm protein TabA 4877916 17433548 P423_23670 Escherichia coli JJ1886 Toxin-antitoxin biofilm protein TabA YP_008724657.1 4877464 D 1355100 CDS YP_008724658.1 556554979 17433549 4878039..4879310 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4879310 17433549 P423_23675 Escherichia coli JJ1886 hypothetical protein YP_008724658.1 4878039 D 1355100 CDS YP_008724659.1 556554980 17433550 4879297..4879635 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4879635 17433550 P423_23680 Escherichia coli JJ1886 hypothetical protein YP_008724659.1 4879297 D 1355100 CDS YP_008724660.1 556554065 17433551 complement(4879692..4880696) 1 NC_022648.1 catalyzes the formation of ornithine and carbamylphosphate from citrulline in the arginine catabolic pathway; Derived by automated computational analysis using gene prediction method: Protein Homology.; ornithine carbamoyltransferase 4880696 17433551 P423_23685 Escherichia coli JJ1886 ornithine carbamoyltransferase YP_008724660.1 4879692 R 1355100 CDS YP_008724661.1 556554066 17433552 4880858..4881274 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; RNase E inhibitor protein 4881274 17433552 P423_23690 Escherichia coli JJ1886 RNase E inhibitor protein YP_008724661.1 4880858 D 1355100 CDS YP_008724662.1 556554067 17433553 complement(4881320..4881823) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetyltransferase 4881823 17433553 P423_23695 Escherichia coli JJ1886 N-acetyltransferase YP_008724662.1 4881320 R 1355100 CDS YP_008724663.1 556554981 17433554 4882016..4883212 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 4883212 17433554 P423_23700 Escherichia coli JJ1886 membrane protein YP_008724663.1 4882016 D 1355100 CDS YP_008724664.1 556554068 17433555 complement(4883266..4886121) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; valyl-tRNA synthase 4886121 17433555 P423_23705 Escherichia coli JJ1886 valyl-tRNA synthase YP_008724664.1 4883266 R 1355100 CDS YP_008724665.1 556554069 17433556 complement(4886121..4886564) 1 NC_022648.1 binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit chi 4886564 17433556 P423_23710 Escherichia coli JJ1886 DNA polymerase III subunit chi YP_008724665.1 4886121 R 1355100 CDS YP_008724666.1 556554070 17433557 complement(4886920..4888431) 1 NC_022648.1 catalyzes the removal of N-terminal amino acids preferably from various peptides; a cyteinylglycinase, transcription regulator and site-specific recombination factor; Derived by automated computational analysis using gene prediction method: Protein Homology.; multifunctional aminopeptidase A 4888431 17433557 P423_23715 Escherichia coli JJ1886 multifunctional aminopeptidase A YP_008724666.1 4886920 R 1355100 CDS YP_008724667.1 556554071 17433558 4888698..4889798 1 NC_022648.1 with LptBGC is involved in lipopolysaccharide export; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide ABC transporter permease LptF 4889798 17433558 P423_23720 Escherichia coli JJ1886 lipopolysaccharide ABC transporter permease LptF YP_008724667.1 4888698 D 1355100 CDS YP_008724668.1 556554072 17433559 4889798..4890880 1 NC_022648.1 with LptABCF is involved in the transport of lipopolysaccharides; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipopolysaccharide ABC transporter permease 4890880 17433559 P423_23725 Escherichia coli JJ1886 lipopolysaccharide ABC transporter permease YP_008724668.1 4889798 D 1355100 CDS YP_008724669.1 556554073 17433560 complement(4891041..4892543) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4892543 17433560 P423_23730 Escherichia coli JJ1886 hypothetical protein YP_008724669.1 4891041 R 1355100 CDS YP_008724670.1 556554074 17433561 complement(4892673..4893692) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; alcohol dehydrogenase 4893692 17433561 P423_23735 Escherichia coli JJ1886 alcohol dehydrogenase YP_008724670.1 4892673 R 1355100 CDS YP_008724671.1 556554982 17433563 4894159..4894749 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; integrase 4894749 17433563 P423_23745 Escherichia coli JJ1886 integrase YP_008724671.1 4894159 D 1355100 CDS YP_008724672.1 556554983 17433564 complement(4894772..4895002) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4895002 17433564 P423_23750 Escherichia coli JJ1886 hypothetical protein YP_008724672.1 4894772 R 1355100 CDS YP_008724673.1 556554984 17433565 4895917..4896192 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4896192 17433565 P423_23755 Escherichia coli JJ1886 transposase YP_008724673.1 4895917 D 1355100 CDS YP_008724674.1 556554985 17433566 4896563..4896832 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4896832 17433566 P423_23760 Escherichia coli JJ1886 hypothetical protein YP_008724674.1 4896563 D 1355100 CDS YP_008724675.1 556554075 17433567 complement(4896986..4897750) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 4897750 17433567 P423_23765 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008724675.1 4896986 R 1355100 CDS YP_008724676.1 556554076 17433568 4897990..4898889 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-3-deoxy-galactonate aldolase 4898889 17433568 P423_23770 Escherichia coli JJ1886 2-keto-3-deoxy-galactonate aldolase YP_008724676.1 4897990 D 1355100 CDS YP_008724677.1 556554986 17433569 4898906..4900423 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; galactarate dehydratase 4900423 17433569 P423_23775 Escherichia coli JJ1886 galactarate dehydratase YP_008724677.1 4898906 D 1355100 CDS YP_008724678.1 556554987 17433570 4900501..4901514 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 4-hydroxythreonine-4-phosphate dehydrogenase 4901514 17433570 P423_23780 Escherichia coli JJ1886 4-hydroxythreonine-4-phosphate dehydrogenase YP_008724678.1 4900501 D 1355100 CDS YP_008724679.1 556554988 17433571 4901775..4903019 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; MFS transporter 4903019 17433571 P423_23785 Escherichia coli JJ1886 MFS transporter YP_008724679.1 4901775 D 1355100 CDS YP_008724680.1 556554989 17433572 4903107..4903283 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS222 4903283 17433572 P423_23790 Escherichia coli JJ1886 transposase IS222 YP_008724680.1 4903107 D 1355100 CDS YP_008724681.1 556554990 17433573 4903624..4904511 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; PTS ascorbate transporter subunit IIC 4904511 17433573 P423_23795 Escherichia coli JJ1886 PTS ascorbate transporter subunit IIC YP_008724681.1 4903624 D 1355100 CDS YP_008724682.1 556554991 17433574 complement(4904711..4904947) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS66 4904947 17433574 P423_23800 Escherichia coli JJ1886 transposase IS66 YP_008724682.1 4904711 R 1355100 CDS YP_008724683.1 556554992 17433575 complement(4905043..4905231) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4905231 17433575 P423_23805 Escherichia coli JJ1886 hypothetical protein YP_008724683.1 4905043 R 1355100 CDS YP_008724684.1 556554993 17433576 4905285..4905710 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4905710 17433576 P423_23810 Escherichia coli JJ1886 transposase YP_008724684.1 4905285 D 1355100 CDS YP_008724685.1 556554077 17433577 4905707..4906057 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4906057 17433577 P423_23815 Escherichia coli JJ1886 isocitrate lyase YP_008724685.1 4905707 D 1355100 CDS YP_008724686.1 556554078 17433578 4906130..4907701 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 4907701 17433578 P423_23820 Escherichia coli JJ1886 transposase IS66 YP_008724686.1 4906130 D 1355100 CDS YP_008724687.1 556554994 17433579 complement(4907972..4908985) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; deoxyribose mutarotase 4908985 17433579 P423_23825 Escherichia coli JJ1886 deoxyribose mutarotase YP_008724687.1 4907972 R 1355100 CDS YP_008724688.1 556554995 17433580 complement(4908997..4910313) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar:proton symporter 4910313 17433580 P423_23830 Escherichia coli JJ1886 sugar:proton symporter YP_008724688.1 4908997 R 1355100 CDS YP_008724689.1 556554996 17433581 complement(4910341..4911261) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ribokinase 4911261 17433581 P423_23835 Escherichia coli JJ1886 ribokinase YP_008724689.1 4910341 R 1355100 CDS YP_008724690.1 556554079 17433582 4911567..4912349 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4912349 17433582 P423_23840 Escherichia coli JJ1886 transcriptional regulator YP_008724690.1 4911567 D 1355100 CDS YP_008724691.1 556554997 17433584 4913575..4913682 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; alcohol dehydrogenase 4913682 17433584 P423_23850 Escherichia coli JJ1886 alcohol dehydrogenase YP_008724691.1 4913575 D 1355100 CDS YP_008724692.1 556554998 17433585 complement(4913863..4914519) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; TetR family transcriptional regulator 4914519 17433585 P423_23855 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008724692.1 4913863 R 1355100 CDS YP_008724693.1 556554999 17433586 complement(4914767..4916023) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4916023 17433586 P423_23860 Escherichia coli JJ1886 hypothetical protein YP_008724693.1 4914767 R 1355100 CDS YP_008724694.1 556555000 17433587 complement(4916107..4918110) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4918110 17433587 P423_23865 Escherichia coli JJ1886 hypothetical protein YP_008724694.1 4916107 R 1355100 CDS YP_008724695.1 556554080 17433588 complement(4918259..4919077) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 4919077 17433588 P423_23870 Escherichia coli JJ1886 transposase YP_008724695.1 4918259 R 1355100 CDS YP_008724696.1 556555001 17433589 complement(4919113..4919415) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4919415 17433589 P423_23875 Escherichia coli JJ1886 hypothetical protein YP_008724696.1 4919113 R 1355100 CDS YP_008724697.1 556555002 17433590 4920349..4920606 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4920606 17433590 P423_23880 Escherichia coli JJ1886 hypothetical protein YP_008724697.1 4920349 D 1355100 CDS YP_008724698.1 556555003 17433591 4920922..4921032 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4921032 17433591 P423_23885 Escherichia coli JJ1886 hypothetical protein YP_008724698.1 4920922 D 1355100 CDS YP_008724699.1 556555004 17433592 complement(4921163..4921930) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron ABC transporter 4921930 17433592 P423_23890 Escherichia coli JJ1886 iron ABC transporter YP_008724699.1 4921163 R 1355100 CDS YP_008724700.1 556554081 17433593 complement(4921931..4922887) 1 NC_022648.1 with BtuD and BtuF transports vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vtamin B12-transporter permease 4922887 17433593 P423_23895 Escherichia coli JJ1886 vtamin B12-transporter permease YP_008724700.1 4921931 R 1355100 CDS YP_008724701.1 556554082 17433594 complement(4922884..4923882) 1 NC_022648.1 part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron ABC transporter 4923882 fecC 17433594 fecC Escherichia coli JJ1886 iron ABC transporter YP_008724701.1 4922884 R 1355100 CDS YP_008724702.1 556554083 17433595 complement(4923879..4924781) 1 NC_022648.1 part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); Derived by automated computational analysis using gene prediction method: Protein Homology.; iron siderophore-binding protein 4924781 fecB 17433595 fecB Escherichia coli JJ1886 iron siderophore-binding protein YP_008724702.1 4923879 R 1355100 CDS YP_008724703.1 556554084 17433596 complement(4924826..4927150) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4927150 17433596 P423_23910 Escherichia coli JJ1886 transporter YP_008724703.1 4924826 R 1355100 CDS YP_008724704.1 556554085 17433597 complement(4927237..4928190) 1 NC_022648.1 with FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; fec operon regulator FecR 4928190 17433597 P423_23915 Escherichia coli JJ1886 fec operon regulator FecR YP_008724704.1 4927237 R 1355100 CDS YP_008724705.1 556554086 17433598 complement(4928187..4928708) 1 NC_022648.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates the genes for iron dicitrate transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase sigma factor 4928708 17433598 P423_23920 Escherichia coli JJ1886 RNA polymerase sigma factor YP_008724705.1 4928187 R 1355100 CDS YP_008724706.1 556555005 17433599 4929051..4929275 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS1 4929275 17433599 P423_23930 Escherichia coli JJ1886 transposase IS1 YP_008724706.1 4929051 D 1355100 CDS YP_008724707.1 556554087 17433600 4929302..4929487 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 4929487 17433600 P423_23935 Escherichia coli JJ1886 insB YP_008724707.1 4929302 D 1355100 CDS YP_008724708.1 556555006 17433601 4929488..4929697 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS1 4929697 17433601 P423_23940 Escherichia coli JJ1886 transposase IS1 YP_008724708.1 4929488 D 1355100 CDS YP_008724709.1 556555007 17433602 4930270..4931628 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4931628 17433602 P423_23945 Escherichia coli JJ1886 hypothetical protein YP_008724709.1 4930270 D 1355100 CDS YP_008724710.1 556554088 17433603 complement(4931867..4933252) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 4933252 17433603 P423_23950 Escherichia coli JJ1886 transposase IS66 YP_008724710.1 4931867 R 1355100 CDS YP_008724711.1 556554089 17433604 complement(4933302..4933649) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4933649 17433604 P423_23955 Escherichia coli JJ1886 isocitrate lyase YP_008724711.1 4933302 R 1355100 CDS YP_008724712.1 556555008 17433605 complement(4933646..4934035) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4934035 17433605 P423_23960 Escherichia coli JJ1886 transposase YP_008724712.1 4933646 R 1355100 CDS YP_008724713.1 556555009 17433606 complement(4934381..4934815) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4934815 17433606 P423_23965 Escherichia coli JJ1886 hypothetical protein YP_008724713.1 4934381 R 1355100 CDS YP_008724714.1 556555010 17433607 complement(4934803..4935204) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4935204 17433607 P423_23970 Escherichia coli JJ1886 hypothetical protein YP_008724714.1 4934803 R 1355100 CDS YP_008724715.1 556554090 17433608 complement(4935464..4936033) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4936033 17433608 P423_23975 Escherichia coli JJ1886 hypothetical protein YP_008724715.1 4935464 R 1355100 CDS YP_008724716.1 556555011 17433609 complement(4936543..4936743) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4936743 17433609 P423_23980 Escherichia coli JJ1886 hypothetical protein YP_008724716.1 4936543 R 1355100 CDS YP_008724717.1 556554091 17433610 complement(4936763..4936903) 1 NC_022648.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 4936903 17433610 P423_23985 Escherichia coli JJ1886 gene expression modulator YP_008724717.1 4936763 R 1355100 CDS YP_008724718.1 556555012 17433611 4937686..4937892 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4937892 17433611 P423_23990 Escherichia coli JJ1886 hypothetical protein YP_008724718.1 4937686 D 1355100 CDS YP_008724719.1 556555013 17433612 4937988..4938590 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4938590 17433612 P423_23995 Escherichia coli JJ1886 hypothetical protein YP_008724719.1 4937988 D 1355100 CDS YP_008724720.1 556555014 17433613 4939791..4940708 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4940708 17433613 P423_24000 Escherichia coli JJ1886 hypothetical protein YP_008724720.1 4939791 D 1355100 CDS YP_008724721.1 556554092 17433614 4940793..4941665 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4941665 17433614 P423_24005 Escherichia coli JJ1886 hypothetical protein YP_008724721.1 4940793 D 1355100 CDS YP_008724722.1 556554093 17433615 4942038..4944884 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4944884 17433615 P423_24010 Escherichia coli JJ1886 hypothetical protein YP_008724722.1 4942038 D 1355100 CDS YP_008724723.1 556555015 17433616 4944955..4945113 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4945113 17433616 P423_24015 Escherichia coli JJ1886 hypothetical protein YP_008724723.1 4944955 D 1355100 CDS YP_008724724.1 556554094 17433617 4945268..4946086 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4946086 17433617 P423_24020 Escherichia coli JJ1886 hypothetical protein YP_008724724.1 4945268 D 1355100 CDS YP_008724725.1 556554095 17433618 4946428..4946901 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4946901 17433618 P423_24025 Escherichia coli JJ1886 hypothetical protein YP_008724725.1 4946428 D 1355100 CDS YP_008724726.1 556554096 17433619 4946917..4947393 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4947393 17433619 P423_24030 Escherichia coli JJ1886 hypothetical protein YP_008724726.1 4946917 D 1355100 CDS YP_008724727.1 556554097 17433620 4947456..4947677 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4947677 17433620 P423_24035 Escherichia coli JJ1886 hypothetical protein YP_008724727.1 4947456 D 1355100 CDS YP_008724728.1 556555016 17433621 4947677..4947790 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4947790 17433621 P423_24040 Escherichia coli JJ1886 hypothetical protein YP_008724728.1 4947677 D 1355100 CDS YP_008724729.1 556554098 17433622 4947840..4948208 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 4948208 17433622 P423_24045 Escherichia coli JJ1886 antitoxin YP_008724729.1 4947840 D 1355100 CDS YP_008724730.1 556554099 17433623 4948298..4948675 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 4948675 17433623 P423_24050 Escherichia coli JJ1886 toxin YP_008724730.1 4948298 D 1355100 CDS YP_008724731.1 556554100 17433624 4948672..4949160 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4949160 17433624 P423_24055 Escherichia coli JJ1886 hypothetical protein YP_008724731.1 4948672 D 1355100 CDS YP_008724732.1 556555017 17433626 4949671..4950096 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4950096 17433626 P423_24065 Escherichia coli JJ1886 transposase YP_008724732.1 4949671 D 1355100 CDS YP_008724733.1 556554101 17433627 4950093..4950443 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4950443 17433627 P423_24070 Escherichia coli JJ1886 isocitrate lyase YP_008724733.1 4950093 D 1355100 CDS YP_008724734.1 556554102 17433628 4950516..4952087 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 4952087 17433628 P423_24075 Escherichia coli JJ1886 transposase IS66 YP_008724734.1 4950516 D 1355100 CDS YP_008724735.1 556555018 17433629 complement(4952358..4953371) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; deoxyribose mutarotase 4953371 17433629 P423_24080 Escherichia coli JJ1886 deoxyribose mutarotase YP_008724735.1 4952358 R 1355100 CDS YP_008724736.1 556555019 17433630 complement(4953383..4954699) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar:proton symporter 4954699 17433630 P423_24085 Escherichia coli JJ1886 sugar:proton symporter YP_008724736.1 4953383 R 1355100 CDS YP_008724737.1 556555020 17433631 complement(4954727..4955647) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ribokinase 4955647 17433631 P423_24090 Escherichia coli JJ1886 ribokinase YP_008724737.1 4954727 R 1355100 CDS YP_008724738.1 556554103 17433632 4955953..4956735 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 4956735 17433632 P423_24095 Escherichia coli JJ1886 transcriptional regulator YP_008724738.1 4955953 D 1355100 CDS YP_008724739.1 556555021 17433634 4957961..4958068 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; alcohol dehydrogenase 4958068 17433634 P423_24105 Escherichia coli JJ1886 alcohol dehydrogenase YP_008724739.1 4957961 D 1355100 CDS YP_008724740.1 556555022 17433635 complement(4958249..4958905) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; TetR family transcriptional regulator 4958905 17433635 P423_24110 Escherichia coli JJ1886 TetR family transcriptional regulator YP_008724740.1 4958249 R 1355100 CDS YP_008724741.1 556555023 17433636 complement(4959153..4960409) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4960409 17433636 P423_24115 Escherichia coli JJ1886 hypothetical protein YP_008724741.1 4959153 R 1355100 CDS YP_008724742.1 556555024 17433637 complement(4960493..4962496) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4962496 17433637 P423_24120 Escherichia coli JJ1886 hypothetical protein YP_008724742.1 4960493 R 1355100 CDS YP_008724743.1 556554104 17433638 complement(4962645..4963463) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 4963463 17433638 P423_24125 Escherichia coli JJ1886 transposase YP_008724743.1 4962645 R 1355100 CDS YP_008724744.1 556555025 17433639 complement(4963499..4963801) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4963801 17433639 P423_24130 Escherichia coli JJ1886 hypothetical protein YP_008724744.1 4963499 R 1355100 CDS YP_008724745.1 556555026 17433640 4964735..4964992 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4964992 17433640 P423_24135 Escherichia coli JJ1886 hypothetical protein YP_008724745.1 4964735 D 1355100 CDS YP_008724746.1 556555027 17433641 4965308..4965418 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4965418 17433641 P423_24140 Escherichia coli JJ1886 hypothetical protein YP_008724746.1 4965308 D 1355100 CDS YP_008724747.1 556555028 17433642 complement(4965549..4966316) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron ABC transporter 4966316 17433642 P423_24145 Escherichia coli JJ1886 iron ABC transporter YP_008724747.1 4965549 R 1355100 CDS YP_008724748.1 556554105 17433643 complement(4966317..4967273) 1 NC_022648.1 with BtuD and BtuF transports vitamin B12 into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; vtamin B12-transporter permease 4967273 17433643 P423_24150 Escherichia coli JJ1886 vtamin B12-transporter permease YP_008724748.1 4966317 R 1355100 CDS YP_008724749.1 556554106 17433644 complement(4967270..4968268) 1 NC_022648.1 part of the FecBCDE citrate-dependent iron (III) transport system; Derived by automated computational analysis using gene prediction method: Protein Homology.; iron ABC transporter 4968268 fecC 17433644 fecC Escherichia coli JJ1886 iron ABC transporter YP_008724749.1 4967270 R 1355100 CDS YP_008724750.1 556554107 17433645 complement(4968265..4969167) 1 NC_022648.1 part of the ABC transporter involved in the uptake of citrate-dependent Fe(3+); Derived by automated computational analysis using gene prediction method: Protein Homology.; iron siderophore-binding protein 4969167 fecB 17433645 fecB Escherichia coli JJ1886 iron siderophore-binding protein YP_008724750.1 4968265 R 1355100 CDS YP_008724751.1 556554108 17433646 complement(4969212..4971536) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transporter 4971536 17433646 P423_24165 Escherichia coli JJ1886 transporter YP_008724751.1 4969212 R 1355100 CDS YP_008724752.1 556554109 17433647 complement(4971623..4972576) 1 NC_022648.1 with FecA forms the FecAR signal transduction system; ferric citrate binds FecA and transmits a signal across the outer membrane to FecR. FecR transmits a signal across the cytoplasmic membrane and activates the sigma 70 protein FecI that directs the RNA polymerase to express the fecABCDE operon; Derived by automated computational analysis using gene prediction method: Protein Homology.; fec operon regulator FecR 4972576 17433647 P423_24170 Escherichia coli JJ1886 fec operon regulator FecR YP_008724752.1 4971623 R 1355100 CDS YP_008724753.1 556554110 17433648 complement(4972573..4973094) 1 NC_022648.1 Member of the extracytoplasmic function sigma factors which are active under specific conditions; binds with the catalytic core of RNA polymerase to produce the holoenzyme and directs bacterial core RNA polymerase to specific promoter elements to initiate transcription; this sigma factor regulates the genes for iron dicitrate transport; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA polymerase sigma factor 4973094 17433648 P423_24175 Escherichia coli JJ1886 RNA polymerase sigma factor YP_008724753.1 4972573 R 1355100 CDS YP_008724754.1 556555029 17433649 4973437..4973661 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS1 4973661 17433649 P423_24185 Escherichia coli JJ1886 transposase IS1 YP_008724754.1 4973437 D 1355100 CDS YP_008724755.1 556554111 17433650 4973688..4973873 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 4973873 17433650 P423_24190 Escherichia coli JJ1886 insB YP_008724755.1 4973688 D 1355100 CDS YP_008724756.1 556555030 17433651 4973874..4974083 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase IS1 4974083 17433651 P423_24195 Escherichia coli JJ1886 transposase IS1 YP_008724756.1 4973874 D 1355100 CDS YP_008724757.1 556555031 17433652 4974656..4976014 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4976014 17433652 P423_24200 Escherichia coli JJ1886 hypothetical protein YP_008724757.1 4974656 D 1355100 CDS YP_008724758.1 556554112 17433653 complement(4976253..4977638) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 4977638 17433653 P423_24205 Escherichia coli JJ1886 transposase IS66 YP_008724758.1 4976253 R 1355100 CDS YP_008724759.1 556554113 17433654 complement(4977688..4978035) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4978035 17433654 P423_24210 Escherichia coli JJ1886 isocitrate lyase YP_008724759.1 4977688 R 1355100 CDS YP_008724760.1 556555032 17433655 complement(4978032..4978421) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4978421 17433655 P423_24215 Escherichia coli JJ1886 transposase YP_008724760.1 4978032 R 1355100 CDS YP_008724761.1 556555033 17433656 complement(4978767..4979201) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4979201 17433656 P423_24220 Escherichia coli JJ1886 hypothetical protein YP_008724761.1 4978767 R 1355100 CDS YP_008724762.1 556555034 17433657 complement(4979189..4979590) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4979590 17433657 P423_24225 Escherichia coli JJ1886 hypothetical protein YP_008724762.1 4979189 R 1355100 CDS YP_008724763.1 556554114 17433658 complement(4979850..4980419) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4980419 17433658 P423_24230 Escherichia coli JJ1886 hypothetical protein YP_008724763.1 4979850 R 1355100 CDS YP_008724764.1 556555035 17433659 complement(4980929..4981129) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4981129 17433659 P423_24235 Escherichia coli JJ1886 hypothetical protein YP_008724764.1 4980929 R 1355100 CDS YP_008724765.1 556554115 17433660 complement(4981149..4981289) 1 NC_022648.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 4981289 17433660 P423_24240 Escherichia coli JJ1886 gene expression modulator YP_008724765.1 4981149 R 1355100 CDS YP_008724766.1 556555036 17433661 4982072..4982278 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4982278 17433661 P423_24245 Escherichia coli JJ1886 hypothetical protein YP_008724766.1 4982072 D 1355100 CDS YP_008724767.1 556555037 17433662 4982374..4982976 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4982976 17433662 P423_24250 Escherichia coli JJ1886 hypothetical protein YP_008724767.1 4982374 D 1355100 CDS YP_008724768.1 556555038 17433663 4984177..4985094 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4985094 17433663 P423_24255 Escherichia coli JJ1886 hypothetical protein YP_008724768.1 4984177 D 1355100 CDS YP_008724769.1 556554116 17433664 4985179..4986051 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4986051 17433664 P423_24260 Escherichia coli JJ1886 hypothetical protein YP_008724769.1 4985179 D 1355100 CDS YP_008724770.1 556554117 17433665 4986424..4989270 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4989270 17433665 P423_24265 Escherichia coli JJ1886 hypothetical protein YP_008724770.1 4986424 D 1355100 CDS YP_008724771.1 556555039 17433666 4989341..4989499 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4989499 17433666 P423_24270 Escherichia coli JJ1886 hypothetical protein YP_008724771.1 4989341 D 1355100 CDS YP_008724772.1 556554118 17433667 4989654..4990472 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4990472 17433667 P423_24275 Escherichia coli JJ1886 hypothetical protein YP_008724772.1 4989654 D 1355100 CDS YP_008724773.1 556554119 17433668 4990814..4991287 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4991287 17433668 P423_24280 Escherichia coli JJ1886 hypothetical protein YP_008724773.1 4990814 D 1355100 CDS YP_008724774.1 556554120 17433669 4991303..4991779 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4991779 17433669 P423_24285 Escherichia coli JJ1886 hypothetical protein YP_008724774.1 4991303 D 1355100 CDS YP_008724775.1 556554121 17433670 4991842..4992063 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4992063 17433670 P423_24290 Escherichia coli JJ1886 hypothetical protein YP_008724775.1 4991842 D 1355100 CDS YP_008724776.1 556555040 17433671 4992063..4992176 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4992176 17433671 P423_24295 Escherichia coli JJ1886 hypothetical protein YP_008724776.1 4992063 D 1355100 CDS YP_008724777.1 556554122 17433672 4992226..4992594 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin 4992594 17433672 P423_24300 Escherichia coli JJ1886 antitoxin YP_008724777.1 4992226 D 1355100 CDS YP_008724778.1 556554123 17433673 4992684..4993061 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin 4993061 17433673 P423_24305 Escherichia coli JJ1886 toxin YP_008724778.1 4992684 D 1355100 CDS YP_008724779.1 556554124 17433674 4993058..4993546 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 4993546 17433674 P423_24310 Escherichia coli JJ1886 hypothetical protein YP_008724779.1 4993058 D 1355100 CDS YP_008724780.1 556555041 17433676 4994057..4994482 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4994482 17433676 P423_24320 Escherichia coli JJ1886 transposase YP_008724780.1 4994057 D 1355100 CDS YP_008724781.1 556554125 17433677 4994479..4994829 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 4994829 17433677 P423_24325 Escherichia coli JJ1886 isocitrate lyase YP_008724781.1 4994479 D 1355100 CDS YP_008724782.1 556554126 17433678 4994902..4996473 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 4996473 17433678 P423_24330 Escherichia coli JJ1886 transposase IS66 YP_008724782.1 4994902 D 1355100 CDS YP_008724783.1 556555042 17433679 4996900..4997325 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 4997325 17433679 P423_24335 Escherichia coli JJ1886 transposase YP_008724783.1 4996900 D 1355100 CDS YP_008724784.1 556555043 17433680 4997867..4999489 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA methyltransferase 4999489 17433680 P423_24340 Escherichia coli JJ1886 DNA methyltransferase YP_008724784.1 4997867 D 1355100 CDS YP_008724785.1 556555044 17433681 4999482..5000672 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA-cytosine methyltransferase 5000672 17433681 P423_24345 Escherichia coli JJ1886 DNA-cytosine methyltransferase YP_008724785.1 4999482 D 1355100 CDS YP_008724786.1 556555045 17433682 complement(5000685..5002424) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type II restriction endonuclease 5002424 17433682 P423_24350 Escherichia coli JJ1886 type II restriction endonuclease YP_008724786.1 5000685 R 1355100 CDS YP_008724787.1 556555046 17433683 complement(5002534..5003820) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 5003820 17433683 P423_24355 Escherichia coli JJ1886 restriction endonuclease YP_008724787.1 5002534 R 1355100 CDS YP_008724788.1 556555047 17433684 complement(5003813..5005888) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 5005888 17433684 P423_24360 Escherichia coli JJ1886 restriction endonuclease YP_008724788.1 5003813 R 1355100 CDS YP_008724789.1 556555048 17433685 complement(5006992..5007246) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; glycosyl transferase 5007246 17433685 P423_24365 Escherichia coli JJ1886 glycosyl transferase YP_008724789.1 5006992 R 1355100 CDS YP_008724790.1 556555049 17433686 complement(5007253..5007420) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5007420 17433686 P423_24370 Escherichia coli JJ1886 hypothetical protein YP_008724790.1 5007253 R 1355100 CDS YP_008724791.1 556555050 17433687 5008046..5009305 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; methylthioribose kinase 5009305 17433687 P423_24375 Escherichia coli JJ1886 methylthioribose kinase YP_008724791.1 5008046 D 1355100 CDS YP_008724792.1 556555051 17433688 5009315..5010430 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; methylthioribose-1-phosphate isomerase 5010430 17433688 P423_24380 Escherichia coli JJ1886 methylthioribose-1-phosphate isomerase YP_008724792.1 5009315 D 1355100 CDS YP_008724793.1 556554127 17433689 5010461..5011102 1 NC_022648.1 catalyzes the formation of glycerone phosphate and (S)-lactaldehyde from L-fuculose 1-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; fuculose phosphate aldolase 5011102 17433689 P423_24385 Escherichia coli JJ1886 fuculose phosphate aldolase YP_008724793.1 5010461 D 1355100 CDS YP_008724794.1 556555052 17433690 5011206..5012210 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; multidrug DMT transporter permease 5012210 17433690 P423_24390 Escherichia coli JJ1886 multidrug DMT transporter permease YP_008724794.1 5011206 D 1355100 CDS YP_008724795.1 556554128 17433691 complement(5012251..5013237) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5013237 17433691 P423_24395 Escherichia coli JJ1886 transcriptional regulator YP_008724795.1 5012251 R 1355100 CDS YP_008724796.1 556555053 17433692 complement(5013275..5013397) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5013397 17433692 P423_24400 Escherichia coli JJ1886 hypothetical protein YP_008724796.1 5013275 R 1355100 CDS YP_008724797.1 556554129 17433693 complement(5013584..5014933) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Gnt-II system L-idonate transporter IdnT 5014933 17433693 P423_24405 Escherichia coli JJ1886 Gnt-II system L-idonate transporter IdnT YP_008724797.1 5013584 R 1355100 CDS YP_008724798.1 556554130 17433694 complement(5015040..5017007) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; dehydratase 5017007 17433694 P423_24410 Escherichia coli JJ1886 dehydratase YP_008724798.1 5015040 R 1355100 CDS YP_008724799.1 556554131 17433695 complement(5017018..5017953) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-3-deoxy-galactonate aldolase 5017953 17433695 P423_24415 Escherichia coli JJ1886 2-keto-3-deoxy-galactonate aldolase YP_008724799.1 5017018 R 1355100 CDS YP_008724800.1 556554132 17433696 complement(5017928..5018716) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 5018716 17433696 P423_24420 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008724800.1 5017928 R 1355100 CDS YP_008724801.1 556554133 17433697 complement(5019019..5019801) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5019801 17433697 P423_24425 Escherichia coli JJ1886 transcriptional regulator YP_008724801.1 5019019 R 1355100 CDS YP_008724802.1 556554134 17433698 complement(5019818..5020450) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; epimerase 5020450 17433698 P423_24430 Escherichia coli JJ1886 epimerase YP_008724802.1 5019818 R 1355100 CDS YP_008724803.1 556554135 17433699 complement(5020462..5020893) 1 NC_022648.1 TolM; with CmtA (IIBC), CmtB possibly forms the mannitol-like permease component of the cryptic mannitol phosphotransferase system, which phosphorylates and transports various carbohydrates and polyhydric alcohols in Escherichia coli; cytoplasmic protein; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS mannitol transporter subunit IIA 5020893 cmtB 17433699 cmtB Escherichia coli JJ1886 PTS mannitol transporter subunit IIA YP_008724803.1 5020462 R 1355100 CDS YP_008724804.1 556554136 17433700 complement(5021024..5021830) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; sgc region protein SgcQ 5021830 17433700 P423_24440 Escherichia coli JJ1886 sgc region protein SgcQ YP_008724804.1 5021024 R 1355100 CDS YP_008724805.1 556554137 17433701 complement(5021843..5023156) 1 NC_022648.1 with GatAB forms a phosphoenolpyruvate-dependent sugar phosphotransferase transporter for galactitol; subunit IIC forms the translocation channel and contains the substrate binding site; Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS galactitol transporter subunit IIC 5023156 gatC 17433701 gatC Escherichia coli JJ1886 PTS galactitol transporter subunit IIC YP_008724805.1 5021843 R 1355100 CDS YP_008724806.1 556554138 17433702 complement(5023168..5023446) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; PTS sugar transporter subunit IIB 5023446 17433702 P423_24450 Escherichia coli JJ1886 PTS sugar transporter subunit IIB YP_008724806.1 5023168 R 1355100 CDS YP_008724807.1 556554139 17433703 complement(5023443..5024564) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; aminopeptidase 5024564 17433703 P423_24455 Escherichia coli JJ1886 aminopeptidase YP_008724807.1 5023443 R 1355100 CDS YP_008724808.1 556555054 17433704 complement(5024963..5025223) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; Zn-finger protein 5025223 17433704 P423_24460 Escherichia coli JJ1886 Zn-finger protein YP_008724808.1 5024963 R 1355100 CDS YP_008724809.1 556554140 17433705 complement(5025351..5026097) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5026097 17433705 P423_24465 Escherichia coli JJ1886 hypothetical protein YP_008724809.1 5025351 R 1355100 CDS YP_008724810.1 556554141 17433707 complement(5026712..5026969) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5026969 17433707 P423_24475 Escherichia coli JJ1886 hypothetical protein YP_008724810.1 5026712 R 1355100 CDS YP_008724811.1 556555055 17433708 complement(5027227..5027349) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5027349 17433708 P423_24480 Escherichia coli JJ1886 hypothetical protein YP_008724811.1 5027227 R 1355100 CDS YP_008724812.1 556554142 17433709 complement(5027543..5028199) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 5028199 17433709 P423_24485 Escherichia coli JJ1886 transposase YP_008724812.1 5027543 R 1355100 CDS YP_008724813.1 556555056 17433710 complement(5028388..5028690) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 5028690 17433710 P423_24490 Escherichia coli JJ1886 transposase YP_008724813.1 5028388 R 1355100 CDS YP_008724814.1 556555057 17433711 5028873..5029859 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5029859 17433711 P423_24495 Escherichia coli JJ1886 hypothetical protein YP_008724814.1 5028873 D 1355100 CDS YP_008724815.1 556554143 17433712 complement(5030442..5031422) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; 9-O-acetyl-N-acetylneuraminic acid deacetylase 5031422 17433712 P423_24500 Escherichia coli JJ1886 9-O-acetyl-N-acetylneuraminic acid deacetylase YP_008724815.1 5030442 R 1355100 CDS YP_008724816.1 556554144 17433713 complement(5031486..5032592) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminic acid mutarotase 5032592 17433713 P423_24505 Escherichia coli JJ1886 N-acetylneuraminic acid mutarotase YP_008724816.1 5031486 R 1355100 CDS YP_008724817.1 556554145 17433714 complement(5032612..5033328) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; N-acetylneuraminic acid channel protein 5033328 17433714 P423_24510 Escherichia coli JJ1886 N-acetylneuraminic acid channel protein YP_008724817.1 5032612 R 1355100 CDS YP_008724818.1 556555058 17433821 5034782..5034982 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5034982 17433821 P423_24515 Escherichia coli JJ1886 hypothetical protein YP_008724818.1 5034782 D 1355100 CDS YP_008724819.1 556555059 17433716 complement(5035010..5036230) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 5036230 17433716 P423_24520 Escherichia coli JJ1886 transposase YP_008724819.1 5035010 R 1355100 CDS YP_008724820.1 556555060 17433717 complement(5036249..5036767) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5036767 17433717 P423_24525 Escherichia coli JJ1886 hypothetical protein YP_008724820.1 5036249 R 1355100 CDS YP_008724821.1 556554146 17433718 5036810..5037274 1 NC_022648.1 inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase 5037274 17433718 P423_24530 Escherichia coli JJ1886 tyrosine recombinase YP_008724821.1 5036810 D 1355100 CDS YP_008724822.1 556554147 17433719 5037752..5038348 1 NC_022648.1 inversion of on/off regulator of fimA; Derived by automated computational analysis using gene prediction method: Protein Homology.; tyrosine recombinase 5038348 17433719 P423_24535 Escherichia coli JJ1886 tyrosine recombinase YP_008724822.1 5037752 D 1355100 CDS YP_008724823.1 556554148 17433720 5038827..5039375 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; type-1 fimbrial protein subunit A 5039375 fimA 17433720 fimA Escherichia coli JJ1886 type-1 fimbrial protein subunit A YP_008724823.1 5038827 D 1355100 CDS YP_008724824.1 556554149 17433721 5039440..5039979 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrin fimI 5039979 17433721 P423_24545 Escherichia coli JJ1886 fimbrin fimI YP_008724824.1 5039440 D 1355100 CDS YP_008724825.1 556554150 17433722 5040016..5040741 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; molecular chaperone FimC 5040741 17433722 P423_24550 Escherichia coli JJ1886 molecular chaperone FimC YP_008724825.1 5040016 D 1355100 CDS YP_008724826.1 556554151 17433723 5040808..5043444 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimD 5043444 17433723 P423_24555 Escherichia coli JJ1886 fimbrial protein FimD YP_008724826.1 5040808 D 1355100 CDS YP_008724827.1 556554152 17433724 5043454..5043984 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimF 5043984 17433724 P423_24560 Escherichia coli JJ1886 fimbrial protein FimF YP_008724827.1 5043454 D 1355100 CDS YP_008724828.1 556554153 17433725 5043997..5044500 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimG 5044500 17433725 P423_24565 Escherichia coli JJ1886 fimbrial protein FimG YP_008724828.1 5043997 D 1355100 CDS YP_008724829.1 556554154 17433726 5044520..5045422 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; fimbrial protein FimH 5045422 17433726 P423_24570 Escherichia coli JJ1886 fimbrial protein FimH YP_008724829.1 5044520 D 1355100 CDS YP_008724830.1 556554155 17433727 complement(5045596..5046939) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; Gnt-II system L-idonate transporter IdnT 5046939 17433727 P423_24575 Escherichia coli JJ1886 Gnt-II system L-idonate transporter IdnT YP_008724830.1 5045596 R 1355100 CDS YP_008724831.1 556554156 17433728 5047279..5048463 1 NC_022648.1 catalyzes the formation of 2-dehydro-3-deoxy-D-gluconate from mannonate; Derived by automated computational analysis using gene prediction method: Protein Homology.; mannonate dehydratase 5048463 17433728 P423_24580 Escherichia coli JJ1886 mannonate dehydratase YP_008724831.1 5047279 D 1355100 CDS YP_008724832.1 556554157 17433729 5048544..5050004 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; D-mannonate oxidoreductase 5050004 17433729 P423_24585 Escherichia coli JJ1886 D-mannonate oxidoreductase YP_008724832.1 5048544 D 1355100 CDS YP_008724833.1 556555061 17433730 complement(5050026..5050220) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5050220 17433730 P423_24590 Escherichia coli JJ1886 hypothetical protein YP_008724833.1 5050026 R 1355100 CDS YP_008724834.1 556554158 17433731 5050219..5050992 1 NC_022648.1 regulates the expression of uxuBA; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5050992 17433731 P423_24595 Escherichia coli JJ1886 transcriptional regulator YP_008724834.1 5050219 D 1355100 CDS YP_008724835.1 556555062 17433732 complement(5051230..5051808) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5051808 17433732 P423_24600 Escherichia coli JJ1886 hypothetical protein YP_008724835.1 5051230 R 1355100 CDS YP_008724836.1 556554159 17433733 5052591..5052983 1 NC_022648.1 inhibitor of RssB activity in response to DNA damage; blocks degradation of stationary phase sigma factor RpoS; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication protein 5052983 iraD 17433733 iraD Escherichia coli JJ1886 DNA replication protein YP_008724836.1 5052591 D 1355100 CDS YP_008724837.1 556554160 17433734 complement(5052976..5053887) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5053887 17433734 P423_24610 Escherichia coli JJ1886 transcriptional regulator YP_008724837.1 5052976 R 1355100 CDS YP_008724838.1 556554161 17433735 complement(5053952..5055124) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isoaspartyl dipeptidase 5055124 17433735 P423_24615 Escherichia coli JJ1886 isoaspartyl dipeptidase YP_008724838.1 5053952 R 1355100 CDS YP_008724839.1 556554162 17433736 complement(5055137..5055598) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 5055598 17433736 P423_24620 Escherichia coli JJ1886 membrane protein YP_008724839.1 5055137 R 1355100 CDS YP_008724840.1 556555063 17433737 complement(5055595..5056278) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5056278 17433737 P423_24625 Escherichia coli JJ1886 hypothetical protein YP_008724840.1 5055595 R 1355100 CDS YP_008724841.1 556555064 17433738 5056528..5057082 1 NC_022648.1 in yeast cells this enzyme removes the 2'-phosphate from RNA via an intermediate in which the phosphate is ADP-ribosylated by NAD followed by a presumed transesterification to release the RNA and generate ADP-ribose 1''-2''-cyclic phosphate; functions in tRNA splicing; the function and substrate of bacterial enzymes in organisms that do not perform splicing is unknown; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RNA 2'-phosphotransferase 5057082 17433738 P423_24630 Escherichia coli JJ1886 RNA 2'-phosphotransferase YP_008724841.1 5056528 D 1355100 CDS YP_008724842.1 556554163 17433739 complement(5057095..5058273) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5058273 17433739 P423_24635 Escherichia coli JJ1886 hypothetical protein YP_008724842.1 5057095 R 1355100 CDS YP_008724843.1 556554164 17433740 complement(5058341..5059201) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5059201 17433740 P423_24640 Escherichia coli JJ1886 hypothetical protein YP_008724843.1 5058341 R 1355100 CDS YP_008724844.1 556554165 17433741 complement(5059266..5059523) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5059523 17433741 P423_24645 Escherichia coli JJ1886 hypothetical protein YP_008724844.1 5059266 R 1355100 CDS YP_008724845.1 556554166 17433742 complement(5059520..5060287) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5060287 17433742 P423_24650 Escherichia coli JJ1886 hypothetical protein YP_008724845.1 5059520 R 1355100 CDS YP_008724846.1 556554167 17433743 complement(5060297..5061448) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5061448 17433743 P423_24655 Escherichia coli JJ1886 hypothetical protein YP_008724846.1 5060297 R 1355100 CDS YP_008724847.1 556554168 17433744 complement(5061564..5062844) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 5062844 17433744 P423_24660 Escherichia coli JJ1886 membrane protein YP_008724847.1 5061564 R 1355100 CDS YP_008724848.1 556554169 17433745 complement(5062885..5064117) 1 NC_022648.1 is involved in resistance to acriflavine, chloramphenicol, norfloxacin, ethidium bromide and TPP; Derived by automated computational analysis using gene prediction method: Protein Homology.; multidrug transporter 5064117 17433745 P423_24665 Escherichia coli JJ1886 multidrug transporter YP_008724848.1 5062885 R 1355100 CDS YP_008724849.1 556554170 17433746 5064584..5065540 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 5065540 17433746 P423_24670 Escherichia coli JJ1886 transposase YP_008724849.1 5064584 D 1355100 CDS YP_008724850.1 556555065 17433748 complement(5065783..5067195) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; GntR family transcriptional regulator 5067195 17433748 P423_24680 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008724850.1 5065783 R 1355100 CDS YP_008724851.1 556554171 17433749 5067372..5067536 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5067536 17433749 P423_24685 Escherichia coli JJ1886 hypothetical protein YP_008724851.1 5067372 D 1355100 CDS YP_008724852.1 556554172 17433750 complement(5067579..5067917) 1 NC_022648.1 involved in the degradation of RNA; may be involved in the recycling of RNA during the SOS response; Derived by automated computational analysis using gene prediction method: Protein Homology.; endoribonuclease SymE 5067917 17433750 P423_24690 Escherichia coli JJ1886 endoribonuclease SymE YP_008724852.1 5067579 R 1355100 CDS YP_008724853.1 556555066 17433751 complement(5068132..5071395) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type I restriction-modification system subunit R 5071395 17433751 P423_24695 Escherichia coli JJ1886 type I restriction-modification system subunit R YP_008724853.1 5068132 R 1355100 CDS YP_008724854.1 556555067 17433752 complement(5071490..5072794) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease subunit S 5072794 17433752 P423_24700 Escherichia coli JJ1886 restriction endonuclease subunit S YP_008724854.1 5071490 R 1355100 CDS YP_008724855.1 556555068 17433753 complement(5072784..5074403) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA methyltransferase 5074403 17433753 P423_24705 Escherichia coli JJ1886 DNA methyltransferase YP_008724855.1 5072784 R 1355100 CDS YP_008724856.1 556555069 17433754 complement(5074467..5075633) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; restriction endonuclease 5075633 17433754 P423_24710 Escherichia coli JJ1886 restriction endonuclease YP_008724856.1 5074467 R 1355100 CDS YP_008724857.1 556555070 17433755 5075836..5076117 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 5076117 17433755 P423_24715 Escherichia coli JJ1886 membrane protein YP_008724857.1 5075836 D 1355100 CDS YP_008724858.1 556555071 17433756 5076104..5076406 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5076406 17433756 P423_24720 Escherichia coli JJ1886 hypothetical protein YP_008724858.1 5076104 D 1355100 CDS YP_008724859.1 556554173 17433757 complement(5076440..5077396) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GTP-binding protein YjiA 5077396 17433757 P423_24725 Escherichia coli JJ1886 GTP-binding protein YjiA YP_008724859.1 5076440 R 1355100 CDS YP_008724860.1 556554174 17433758 complement(5077407..5077610) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5077610 17433758 P423_24730 Escherichia coli JJ1886 hypothetical protein YP_008724860.1 5077407 R 1355100 CDS YP_008724861.1 556554175 17433759 complement(5077660..5079810) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; carbon starvation protein CstA 5079810 17433759 P423_24735 Escherichia coli JJ1886 carbon starvation protein CstA YP_008724861.1 5077660 R 1355100 CDS YP_008724862.1 556554176 17433760 5080187..5081851 1 NC_022648.1 serine sensor receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.; methyl-accepting chemotaxis protein 5081851 17433760 P423_24740 Escherichia coli JJ1886 methyl-accepting chemotaxis protein YP_008724862.1 5080187 D 1355100 CDS YP_008724863.1 556554177 17433761 complement(5081900..5083261) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; L-galactonate transporter 5083261 17433761 P423_24745 Escherichia coli JJ1886 L-galactonate transporter YP_008724863.1 5081900 R 1355100 CDS YP_008724864.1 556554178 17433762 complement(5083478..5084392) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; GntR family transcriptional regulator 5084392 17433762 P423_24750 Escherichia coli JJ1886 GntR family transcriptional regulator YP_008724864.1 5083478 R 1355100 CDS YP_008724865.1 556554179 17433763 5084531..5085553 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; galactonate oxidoreductase 5085553 17433763 P423_24755 Escherichia coli JJ1886 galactonate oxidoreductase YP_008724865.1 5084531 D 1355100 CDS YP_008724866.1 556554180 17433764 complement(5085693..5087987) 1 NC_022648.1 catalyzes the transfer of phosphoglycerol to the glucan backbone; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerol transferase 5087987 17433764 P423_24760 Escherichia coli JJ1886 phosphoglycerol transferase YP_008724866.1 5085693 R 1355100 CDS YP_008724867.1 556554181 17433765 complement(5088241..5088738) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5088738 17433765 P423_24765 Escherichia coli JJ1886 hypothetical protein YP_008724867.1 5088241 R 1355100 CDS YP_008724868.1 556554182 17433766 complement(5088784..5089521) 1 NC_022648.1 acts to load the DnaB helicase onto the initiation site during DNA replication; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA replication protein DnaC 5089521 17433766 P423_24770 Escherichia coli JJ1886 DNA replication protein DnaC YP_008724868.1 5088784 R 1355100 CDS YP_008724869.1 556554183 17433767 complement(5089524..5090063) 1 NC_022648.1 This protein is required for primosome-dependent normal DNA replication; it is also involved in inducing stable DNA replication during SOS response. It forms, in concert with dnaB protein and other prepriming proteins dnaC, N, N', N'' a prepriming protein complex on the specific site of the template DNA recognized by protein N'; Derived by automated computational analysis using gene prediction method: Protein Homology.; primosomal protein DnaI 5090063 17433767 P423_24775 Escherichia coli JJ1886 primosomal protein DnaI YP_008724869.1 5089524 R 1355100 CDS YP_008724870.1 556554184 17433768 complement(5090170..5090643) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5090643 17433768 P423_24780 Escherichia coli JJ1886 hypothetical protein YP_008724870.1 5090170 R 1355100 CDS YP_008724871.1 556554185 17433769 complement(5090634..5091404) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 5091404 17433769 P423_24785 Escherichia coli JJ1886 membrane protein YP_008724871.1 5090634 R 1355100 CDS YP_008724872.1 556554186 17433770 5092025..5092750 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; LuxR family transcriptional regulator 5092750 17433770 P423_24790 Escherichia coli JJ1886 LuxR family transcriptional regulator YP_008724872.1 5092025 D 1355100 CDS YP_008724873.1 556555072 17433771 5092762..5093385 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5093385 17433771 P423_24795 Escherichia coli JJ1886 hypothetical protein YP_008724873.1 5092762 D 1355100 CDS YP_008724874.1 556554187 17433772 complement(5093423..5094211) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; ferric iron reductase involved in ferric hydroximate transport 5094211 17433772 P423_24800 Escherichia coli JJ1886 ferric iron reductase involved in ferric hydroximate transport YP_008724874.1 5093423 R 1355100 CDS YP_008724875.1 556554188 17433773 5094313..5094588 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5094588 17433773 P423_24805 Escherichia coli JJ1886 hypothetical protein YP_008724875.1 5094313 D 1355100 CDS YP_008724876.1 556554189 17433777 complement(5095149..5096180) 1 NC_022648.1 16S rRNA M2G1207 methyltransferase; one of many enzymes that modify bases of the ribosomal RNA; this enzyme methylates the G at position 1207 of the small ribosomal subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.; 16S rRNA methyltransferase 5096180 rsmC 17433777 rsmC Escherichia coli JJ1886 16S rRNA methyltransferase YP_008724876.1 5095149 R 1355100 CDS YP_008724877.1 556554190 17433780 5096283..5096696 1 NC_022648.1 with the chi subunit binds to single-strand binding (SSB) protein and acts as a bridge between the DnaX clamp loader complex and the SSB; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA polymerase III subunit psi 5096696 17433780 P423_24830 Escherichia coli JJ1886 DNA polymerase III subunit psi YP_008724877.1 5096283 D 1355100 CDS YP_008724878.1 556554191 17433781 5096665..5097111 1 NC_022648.1 alanine acetyltransferase that specifically acetylates ribosomal protein S18; Derived by automated computational analysis using gene prediction method: Protein Homology.; alanine acetyltransferase 5097111 rimI 17433781 rimI Escherichia coli JJ1886 alanine acetyltransferase YP_008724878.1 5096665 D 1355100 CDS YP_008724879.1 556554192 17433782 5097126..5097803 1 NC_022648.1 manganese-dependent 5'-nucleotidase; specific for 5'-UMP, 5'-dUMP, and 5'-dTMP; member of haloacid dehalogenase (HAD)-like hydrolase superfamily; Derived by automated computational analysis using gene prediction method: Protein Homology.; dUMP phosphatase 5097803 17433782 P423_24840 Escherichia coli JJ1886 dUMP phosphatase YP_008724879.1 5097126 D 1355100 CDS YP_008724880.1 556555073 17433783 5097894..5099483 1 NC_022648.1 stimulates the release of release factors 1 and 2 from the ribosome after hydrolysis of the ester bond in peptidyl-tRNA has occurred; GDP/GTP-binding protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; peptide chain release factor 3 5099483 prfC 17433783 prfC Escherichia coli JJ1886 peptide chain release factor 3 YP_008724880.1 5097894 D 1355100 CDS YP_008724881.1 556554193 17433784 5099876..5100481 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5100481 17433784 P423_24850 Escherichia coli JJ1886 hypothetical protein YP_008724881.1 5099876 D 1355100 CDS YP_008724882.1 556555074 17433785 5100608..5100769 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 5100769 17433785 P423_24855 Escherichia coli JJ1886 membrane protein YP_008724882.1 5100608 D 1355100 CDS YP_008724883.1 556554194 17433786 5100891..5101964 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5101964 17433786 P423_24860 Escherichia coli JJ1886 hypothetical protein YP_008724883.1 5100891 D 1355100 CDS YP_008724884.1 556554195 17433787 5101961..5102743 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribonuclease 5102743 17433787 P423_24865 Escherichia coli JJ1886 deoxyribonuclease YP_008724884.1 5101961 D 1355100 CDS YP_008724885.1 556554196 17433788 complement(5103259..5104122) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5104122 17433788 P423_24870 Escherichia coli JJ1886 hypothetical protein YP_008724885.1 5103259 R 1355100 CDS YP_008724886.1 556554197 17433789 complement(5104094..5105644) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5105644 17433789 P423_24875 Escherichia coli JJ1886 hypothetical protein YP_008724886.1 5104094 R 1355100 CDS YP_008724887.1 556555075 17433790 5105696..5105797 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 5105797 17433790 P423_24880 Escherichia coli JJ1886 hypothetical protein YP_008724887.1 5105696 D 1355100 CDS YP_008724888.1 556554198 17433791 5105902..5106681 1 NC_022648.1 catalyzes the formation of D-glyceraldehyde 3-phosphate and acetaldehyde from 2-deoxy-D-ribose-5-phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; deoxyribose-phosphate aldolase 5106681 17433791 P423_24885 Escherichia coli JJ1886 deoxyribose-phosphate aldolase YP_008724888.1 5105902 D 1355100 CDS YP_008724889.1 556554199 17433792 5106759..5108081 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; thymidine phosphorylase 5108081 17433792 P423_24890 Escherichia coli JJ1886 thymidine phosphorylase YP_008724889.1 5106759 D 1355100 CDS YP_008724890.1 556554200 17433793 5108133..5109356 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphopentomutase 5109356 17433793 P423_24895 Escherichia coli JJ1886 phosphopentomutase YP_008724890.1 5108133 D 1355100 CDS YP_008724891.1 556554201 17433794 5109413..5110132 1 NC_022648.1 catalyzes the reversible phosphorolysis of ribonucleosides and 2'- deoxyribonucleosides to the free base and (2'-deoxy)ribose-1- phosphate; Derived by automated computational analysis using gene prediction method: Protein Homology.; purine nucleoside phosphorylase 5110132 deoD 17433794 deoD Escherichia coli JJ1886 purine nucleoside phosphorylase YP_008724891.1 5109413 D 1355100 CDS YP_008724892.1 556554202 17433795 5110299..5111630 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5111630 17433795 P423_24905 Escherichia coli JJ1886 transcriptional regulator YP_008724892.1 5110299 D 1355100 CDS YP_008724893.1 556554203 17433796 complement(5111631..5112647) 1 NC_022648.1 Catalyzes both the ATP-dependent activation of exogenously supplied lipoate to lipoyl-AMP and the transfer of the activated lipoyl on the lipoate-dependent enzymes. Creates an amide linkage that joins the free carboxyl group of lipoic acid to the epsilon-amino group of a specific lysine residue in lipoyl domain of apoproteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; lipoate-protein ligase A 5112647 lplA 17433796 lplA Escherichia coli JJ1886 lipoate-protein ligase A YP_008724893.1 5111631 R 1355100 CDS YP_008724894.1 556554204 17433797 complement(5112675..5113319) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 5113319 17433797 P423_24915 Escherichia coli JJ1886 membrane protein YP_008724894.1 5112675 R 1355100 CDS YP_008724895.1 556554205 17433798 5113425..5114393 1 NC_022648.1 catalyzes the formation of serine from O-phosphoserine; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoserine phosphatase 5114393 serB 17433798 serB Escherichia coli JJ1886 phosphoserine phosphatase YP_008724895.1 5113425 D 1355100 CDS YP_008724896.1 556554206 17433799 5114442..5115824 1 NC_022648.1 Sms; stabilizes the strand-invasion intermediate during the DNA repair; involved in recombination of donor DNA and plays an important role in DNA damage repair after exposure to mutagenic agents; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA repair protein RadA 5115824 17433799 P423_24925 Escherichia coli JJ1886 DNA repair protein RadA YP_008724896.1 5114442 D 1355100 CDS YP_008724897.1 556554207 17433800 5115845..5117077 1 NC_022648.1 catalyzes the formation of NAD(+) from nicotinamide ribonucleotide; catalyzes the formation of nicotinamide mononucleotide from nicotinamide riboside; also has a regulatory function; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5117077 17433800 P423_24930 Escherichia coli JJ1886 transcriptional regulator YP_008724897.1 5115845 D 1355100 CDS YP_008724898.1 556554208 17433801 complement(5117198..5118865) 1 NC_022648.1 ChvD; in Agrobacterium tumefaciens, mutations in both Walker boxes were found to affect virulence; Derived by automated computational analysis using gene prediction method: Protein Homology.; heme ABC transporter ATP-binding protein 5118865 17433801 P423_24935 Escherichia coli JJ1886 heme ABC transporter ATP-binding protein YP_008724898.1 5117198 R 1355100 CDS YP_008724899.1 556554209 17433802 5119072..5121009 1 NC_022648.1 catalyzes the cleavage of the glycosidic bonds between N-acetylmuramic acid and N-acetylglucosamine residues in peptidoglycan; Derived by automated computational analysis using gene prediction method: Protein Homology.; lytic murein transglycosylase 5121009 17433802 P423_24940 Escherichia coli JJ1886 lytic murein transglycosylase YP_008724899.1 5119072 D 1355100 CDS YP_008724900.1 556554210 17433803 5121099..5121425 1 NC_022648.1 When complexed with L-tryptophan it binds the operator region of the trp operon and prevents the initiation of transcription; Derived by automated computational analysis using gene prediction method: Protein Homology.; Trp operon repressor 5121425 17433803 P423_24945 Escherichia coli JJ1886 Trp operon repressor YP_008724900.1 5121099 D 1355100 CDS YP_008724901.1 556554211 17433804 complement(5121504..5122040) 1 NC_022648.1 pyrophosphatase; has activity against dUTP and dITP; the crystal structure of the Vibrio protein showed similarity to Methanococcus janaschii Mj0226; in Vibrio cholerae this gene is part of the Mba operon that is involved in regulation and maintenance of biofilms; in Escherichia coli overexpression of this gene leads to resistance to an HMP analog; Derived by automated computational analysis using gene prediction method: Protein Homology.; inosine/xanthosine triphosphatase 5122040 yjjX 17433804 yjjX Escherichia coli JJ1886 inosine/xanthosine triphosphatase YP_008724901.1 5121504 R 1355100 CDS YP_008724902.1 556554212 17433805 5122083..5122730 1 NC_022648.1 catalyzes reactions involving the transfer of phospho groups between the three carbon atoms of phosphoglycerate; Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphoglycerate mutase 5122730 17433805 P423_24955 Escherichia coli JJ1886 phosphoglycerate mutase YP_008724902.1 5122083 D 1355100 CDS YP_008724903.1 556554213 17433806 complement(5122727..5123596) 1 NC_022648.1 AraC family; binds to the right arm of the replication origin oriC; Derived by automated computational analysis using gene prediction method: Protein Homology.; right origin-binding protein 5123596 17433806 P423_24960 Escherichia coli JJ1886 right origin-binding protein YP_008724903.1 5122727 R 1355100 CDS YP_008724904.1 556554214 17433807 5123807..5124280 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 5124280 17433807 P423_24965 Escherichia coli JJ1886 hypothetical protein YP_008724904.1 5123807 D 1355100 CDS YP_008724905.1 556554215 17433808 5124293..5124982 1 NC_022648.1 response regulator in two-component regulatory system with CreC; CreB protein is phosphorylated by sensor protein phospho-CreC; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5124982 17433808 P423_24970 Escherichia coli JJ1886 transcriptional regulator YP_008724905.1 5124293 D 1355100 CDS YP_008724906.1 556554216 17433809 5124982..5126406 1 NC_022648.1 part of a two-component regulatory system with CreB or PhoB; involved in catabolic regulation; Derived by automated computational analysis using gene prediction method: Protein Homology.; sensory histidine kinase 5126406 17433809 P423_24975 Escherichia coli JJ1886 sensory histidine kinase YP_008724906.1 5124982 D 1355100 CDS YP_008724907.1 556554217 17433810 5126464..5127816 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; membrane protein 5127816 17433810 P423_24980 Escherichia coli JJ1886 membrane protein YP_008724907.1 5126464 D 1355100 CDS YP_008724908.1 556554218 17433811 complement(5127876..5128592) 1 NC_022648.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transcriptional regulator 5128592 17433811 P423_24985 Escherichia coli JJ1886 transcriptional regulator YP_008724908.1 5127876 R 1355100 CDS YP_008724909.1 556554219 17433812 5129228..5129914 1 NC_022648.1 member of the SPOUT superfamily of methyltransferases; Derived by automated computational analysis using gene prediction method: Protein Homology.; RNA methyltransferase 5129914 17433812 P423_24990 Escherichia coli JJ1886 RNA methyltransferase YP_008724909.1 5129228 D 1355100 CDS YP_008724910.1 556555084 17433829 complement(17..931) 1 NC_022649.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; plasmid replication protein 931 17433829 P423_25135 Escherichia coli JJ1886 plasmid replication protein YP_008724910.1 17 R 1355100 CDS YP_008724911.1 556555085 17433824 complement(1130..1222) 1 NC_022649.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1222 17433824 P423_25140 Escherichia coli JJ1886 hypothetical protein YP_008724911.1 1130 R 1355100 CDS YP_008724912.1 556555083 17433825 2668..2877 1 NC_022649.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 2877 17433825 P423_25145 Escherichia coli JJ1886 hypothetical protein YP_008724912.1 2668 D 1355100 CDS YP_008724913.1 556555086 17433826 complement(2943..3476) 1 NC_022649.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3476 17433826 P423_25150 Escherichia coli JJ1886 hypothetical protein YP_008724913.1 2943 R 1355100 CDS YP_008724914.1 556555087 17433827 complement(3479..4405) 1 NC_022649.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; mobilization protein 4405 17433827 P423_25155 Escherichia coli JJ1886 mobilization protein YP_008724914.1 3479 R 1355100 CDS YP_008724915.1 556555088 17433828 4582..4980 1 NC_022649.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4980 17433828 P423_25160 Escherichia coli JJ1886 hypothetical protein YP_008724915.1 4582 D 1355100 CDS YP_008724916.1 556555175 17433907 complement(join(54638..55956,1..550)) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraG 550 17433907 P423_25200 Escherichia coli JJ1886 conjugal transfer protein TraG YP_008724916.1 54638 R 1355100 CDS YP_008724917.1 556555103 17433831 complement(615..770) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 770 17433831 P423_25205 Escherichia coli JJ1886 hypothetical protein YP_008724917.1 615 R 1355100 CDS YP_008724918.1 556555104 17433832 complement(767..3379) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraI 3379 17433832 P423_25210 Escherichia coli JJ1886 conjugal transfer protein TraI YP_008724918.1 767 R 1355100 CDS YP_008724919.1 556555105 17433833 complement(3429..3788) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbJ 3788 17433833 P423_25215 Escherichia coli JJ1886 conjugal transfer protein TrbJ YP_008724919.1 3429 R 1355100 CDS YP_008724920.1 556555106 17433834 4138..4572 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4572 17433834 P423_25220 Escherichia coli JJ1886 hypothetical protein YP_008724920.1 4138 D 1355100 CDS YP_008724921.1 556555107 17433835 4572..5357 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraL 5357 17433835 P423_25225 Escherichia coli JJ1886 conjugal transfer protein TraL YP_008724921.1 4572 D 1355100 CDS YP_008724922.1 556555108 17433836 5357..5797 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraM 5797 17433836 P423_25230 Escherichia coli JJ1886 conjugal transfer protein TraM YP_008724922.1 5357 D 1355100 CDS YP_008724923.1 556555109 17433837 5848..6081 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 6081 17433837 P423_25235 Escherichia coli JJ1886 hypothetical protein YP_008724923.1 5848 D 1355100 CDS YP_008724924.1 556555110 17433838 complement(6414..7094) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 7094 17433838 P423_25240 Escherichia coli JJ1886 hypothetical protein YP_008724924.1 6414 R 1355100 CDS YP_008724925.1 556555111 17433839 complement(7116..8129) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 8129 17433839 P423_25245 Escherichia coli JJ1886 hypothetical protein YP_008724925.1 7116 R 1355100 CDS YP_008724926.1 556555112 17433840 complement(8126..8323) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 8323 17433840 P423_25250 Escherichia coli JJ1886 hypothetical protein YP_008724926.1 8126 R 1355100 CDS YP_008724927.1 556555113 17433841 complement(8449..9462) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; plasmid stablization protein ParB 9462 17433841 P423_25255 Escherichia coli JJ1886 plasmid stablization protein ParB YP_008724927.1 8449 R 1355100 CDS YP_008724928.1 556555114 17433842 complement(9462..10226) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ParA ATPase 10226 17433842 P423_25260 Escherichia coli JJ1886 ParA ATPase YP_008724928.1 9462 R 1355100 CDS YP_008724929.1 556555115 17433843 complement(10229..10582) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transcriptional regulator 10582 17433843 P423_25265 Escherichia coli JJ1886 transcriptional regulator YP_008724929.1 10229 R 1355100 CDS YP_008724930.1 556555116 17433844 complement(10729..11619) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 11619 17433844 P423_25270 Escherichia coli JJ1886 hypothetical protein YP_008724930.1 10729 R 1355100 CDS YP_008724931.1 556555117 17433845 complement(11621..12733) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; protein klaB 12733 17433845 P423_25275 Escherichia coli JJ1886 protein klaB YP_008724931.1 11621 R 1355100 CDS YP_008724932.1 556555118 17433846 complement(12730..13515) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 13515 17433846 P423_25280 Escherichia coli JJ1886 hypothetical protein YP_008724932.1 12730 R 1355100 CDS YP_008724933.1 556555119 17433847 complement(13596..14069) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 14069 17433847 P423_25285 Escherichia coli JJ1886 hypothetical protein YP_008724933.1 13596 R 1355100 CDS YP_008724934.1 556555120 17433848 complement(14157..14498) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 14498 17433848 P423_25290 Escherichia coli JJ1886 hypothetical protein YP_008724934.1 14157 R 1355100 CDS YP_008724935.1 556555121 17433849 complement(14501..14878) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 14878 17433849 P423_25295 Escherichia coli JJ1886 hypothetical protein YP_008724935.1 14501 R 1355100 CDS YP_008724936.1 556555122 17433850 complement(14914..15237) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 15237 17433850 P423_25300 Escherichia coli JJ1886 hypothetical protein YP_008724936.1 14914 R 1355100 CDS YP_008724937.1 556555123 17433851 complement(15600..15860) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 15860 17433851 P423_25305 Escherichia coli JJ1886 hypothetical protein YP_008724937.1 15600 R 1355100 CDS YP_008724938.1 556555124 17433852 complement(15861..16979) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; protein klcB 16979 17433852 P423_25310 Escherichia coli JJ1886 protein klcB YP_008724938.1 15861 R 1355100 CDS YP_008724939.1 556555125 17433853 complement(17027..17494) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; klcA 17494 17433853 P423_25315 Escherichia coli JJ1886 klcA YP_008724939.1 17027 R 1355100 CDS YP_008724940.1 556555126 17433854 complement(17636..18142) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 18142 17433854 P423_25320 Escherichia coli JJ1886 hypothetical protein YP_008724940.1 17636 R 1355100 CDS YP_008724941.1 556555127 17433855 complement(18562..18759) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 18759 17433855 P423_25325 Escherichia coli JJ1886 hypothetical protein YP_008724941.1 18562 R 1355100 CDS YP_008724942.1 556555128 17433856 complement(18849..19433) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 19433 17433856 P423_25330 Escherichia coli JJ1886 hypothetical protein YP_008724942.1 18849 R 1355100 CDS YP_008724943.1 556555129 17433857 complement(19430..19678) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 19678 17433857 P423_25335 Escherichia coli JJ1886 hypothetical protein YP_008724943.1 19430 R 1355100 CDS YP_008724944.1 556555099 17433858 complement(19678..19986) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; XRE family transcriptional regulator 19986 17433858 P423_25340 Escherichia coli JJ1886 XRE family transcriptional regulator YP_008724944.1 19678 R 1355100 CDS YP_008724945.1 556555130 17433859 complement(19995..20294) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 20294 17433859 P423_25345 Escherichia coli JJ1886 hypothetical protein YP_008724945.1 19995 R 1355100 CDS YP_008724946.1 556555131 17433860 complement(21361..22254) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 22254 17433860 P423_25350 Escherichia coli JJ1886 hypothetical protein YP_008724946.1 21361 R 1355100 CDS YP_008724947.1 556555100 17433861 complement(22355..22726) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 22726 17433861 P423_25355 Escherichia coli JJ1886 single-stranded DNA-binding protein YP_008724947.1 22355 R 1355100 CDS YP_008724948.1 556555132 17433862 22886..23236 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 23236 17433862 P423_25360 Escherichia coli JJ1886 hypothetical protein YP_008724948.1 22886 D 1355100 CDS YP_008724949.1 556555133 17433863 23490..24377 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbB 24377 17433863 P423_25365 Escherichia coli JJ1886 conjugal transfer protein TrbB YP_008724949.1 23490 D 1355100 CDS YP_008724950.1 556555134 17433864 24491..24874 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbC 24874 17433864 P423_25370 Escherichia coli JJ1886 conjugal transfer protein TrbC YP_008724950.1 24491 D 1355100 CDS YP_008724951.1 556555135 17433865 24931..25203 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; type IV secretion protein 25203 17433865 P423_25375 Escherichia coli JJ1886 type IV secretion protein YP_008724951.1 24931 D 1355100 CDS YP_008724952.1 556555136 17433866 25200..27743 1 NC_022650.1 type IV secretion system ATPase VirB4 family; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbE 27743 17433866 P423_25380 Escherichia coli JJ1886 conjugal transfer protein TrbE YP_008724952.1 25200 D 1355100 CDS YP_008724953.1 556555137 17433867 27740..28447 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbF 28447 17433867 P423_25385 Escherichia coli JJ1886 conjugal transfer protein TrbF YP_008724953.1 27740 D 1355100 CDS YP_008724954.1 556555138 17433868 28463..29353 1 NC_022650.1 type IV secretion system VirB9/CagX family; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbG 29353 17433868 P423_25390 Escherichia coli JJ1886 conjugal transfer protein TrbG YP_008724954.1 28463 D 1355100 CDS YP_008724955.1 556555139 17433869 29356..29808 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 29808 17433869 P423_25395 Escherichia coli JJ1886 hypothetical protein YP_008724955.1 29356 D 1355100 CDS YP_008724956.1 556555140 17433870 29812..31206 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbI 31206 17433870 P423_25400 Escherichia coli JJ1886 conjugal transfer protein TrbI YP_008724956.1 29812 D 1355100 CDS YP_008724957.1 556555141 17433871 31219..31989 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbJ 31989 17433871 P423_25405 Escherichia coli JJ1886 conjugal transfer protein TrbJ YP_008724957.1 31219 D 1355100 CDS YP_008724958.1 556555142 17433872 32002..32175 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 32175 17433872 P423_25410 Escherichia coli JJ1886 hypothetical protein YP_008724958.1 32002 D 1355100 CDS YP_008724959.1 556555143 17433873 32180..33733 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 33733 17433873 P423_25415 Escherichia coli JJ1886 hypothetical protein YP_008724959.1 32180 D 1355100 CDS YP_008724960.1 556555144 17433874 33744..34049 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 34049 17433874 P423_25420 Escherichia coli JJ1886 hypothetical protein YP_008724960.1 33744 D 1355100 CDS YP_008724961.1 556555145 17433875 34065..34835 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein 34835 17433875 P423_25425 Escherichia coli JJ1886 conjugal transfer protein YP_008724961.1 34065 D 1355100 CDS YP_008724962.1 556555146 17433876 34852..35538 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 35538 17433876 P423_25430 Escherichia coli JJ1886 hypothetical protein YP_008724962.1 34852 D 1355100 CDS YP_008724963.1 556555147 17433877 35982..36077 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 36077 17433877 P423_25435 Escherichia coli JJ1886 membrane protein YP_008724963.1 35982 D 1355100 CDS YP_008724964.1 556555148 17433878 complement(36183..36554) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 36554 17433878 P423_25440 Escherichia coli JJ1886 hypothetical protein YP_008724964.1 36183 R 1355100 CDS YP_008724965.1 556555149 17433879 complement(36572..36967) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 36967 17433879 P423_25445 Escherichia coli JJ1886 hypothetical protein YP_008724965.1 36572 R 1355100 CDS YP_008724966.1 556555150 17433880 complement(36972..37292) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 37292 17433880 P423_25450 Escherichia coli JJ1886 hypothetical protein YP_008724966.1 36972 R 1355100 CDS YP_008724967.1 556555151 17433881 complement(37292..37540) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 37540 17433881 P423_25455 Escherichia coli JJ1886 hypothetical protein YP_008724967.1 37292 R 1355100 CDS YP_008724968.1 556555152 17433882 complement(37697..38200) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 38200 17433882 P423_25460 Escherichia coli JJ1886 hypothetical protein YP_008724968.1 37697 R 1355100 CDS YP_008724969.1 556555153 17433883 complement(38200..38451) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 38451 17433883 P423_25465 Escherichia coli JJ1886 hypothetical protein YP_008724969.1 38200 R 1355100 CDS YP_008724970.1 556555154 17433884 complement(38441..38764) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 38764 17433884 P423_25470 Escherichia coli JJ1886 hypothetical protein YP_008724970.1 38441 R 1355100 CDS YP_008724971.1 556555155 17433885 complement(38754..39389) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; resolvase 39389 17433885 P423_25475 Escherichia coli JJ1886 resolvase YP_008724971.1 38754 R 1355100 CDS YP_008724972.1 556555156 17433886 complement(39420..39866) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 39866 17433886 P423_25480 Escherichia coli JJ1886 hypothetical protein YP_008724972.1 39420 R 1355100 CDS YP_008724973.1 556555157 17433887 complement(39900..40406) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 40406 17433887 P423_25485 Escherichia coli JJ1886 hypothetical protein YP_008724973.1 39900 R 1355100 CDS YP_008724974.1 556555158 17433888 complement(40426..40770) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 40770 17433888 P423_25490 Escherichia coli JJ1886 hypothetical protein YP_008724974.1 40426 R 1355100 CDS YP_008724975.1 556555159 17433889 complement(40793..41272) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 41272 17433889 P423_25495 Escherichia coli JJ1886 hypothetical protein YP_008724975.1 40793 R 1355100 CDS YP_008724976.1 556555160 17433890 complement(41529..41858) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 41858 17433890 P423_25500 Escherichia coli JJ1886 hypothetical protein YP_008724976.1 41529 R 1355100 CDS YP_008724977.1 556555161 17433891 42086..42970 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 42970 17433891 P423_25505 Escherichia coli JJ1886 hypothetical protein YP_008724977.1 42086 D 1355100 CDS YP_008724978.1 556555162 17433892 42973..43995 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 43995 17433892 P423_25510 Escherichia coli JJ1886 hypothetical protein YP_008724978.1 42973 D 1355100 CDS YP_008724979.1 556555163 17433893 43992..44240 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 44240 17433893 P423_25515 Escherichia coli JJ1886 hypothetical protein YP_008724979.1 43992 D 1355100 CDS YP_008724980.1 556555164 17433894 complement(44298..44495) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 44495 17433894 P423_25520 Escherichia coli JJ1886 hypothetical protein YP_008724980.1 44298 R 1355100 CDS YP_008724981.1 556555165 17433895 complement(44510..45124) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 45124 17433895 P423_25525 Escherichia coli JJ1886 hypothetical protein YP_008724981.1 44510 R 1355100 CDS YP_008724982.1 556555166 17433896 45260..45466 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 45466 17433896 P423_25530 Escherichia coli JJ1886 hypothetical protein YP_008724982.1 45260 D 1355100 CDS YP_008724983.1 556555167 17433897 45487..45936 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 45936 17433897 P423_25535 Escherichia coli JJ1886 hypothetical protein YP_008724983.1 45487 D 1355100 CDS YP_008724984.1 556555101 17433898 complement(45978..46193) 1 NC_022650.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 46193 17433898 P423_25540 Escherichia coli JJ1886 gene expression modulator YP_008724984.1 45978 R 1355100 CDS YP_008724985.1 556555168 17433899 complement(46190..46648) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 46648 17433899 P423_25545 Escherichia coli JJ1886 hypothetical protein YP_008724985.1 46190 R 1355100 CDS YP_008724986.1 556555169 17433900 complement(46726..47190) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 47190 17433900 P423_25550 Escherichia coli JJ1886 hypothetical protein YP_008724986.1 46726 R 1355100 CDS YP_008724987.1 556555170 17433901 complement(47246..51205) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA primase 51205 17433901 P423_25555 Escherichia coli JJ1886 DNA primase YP_008724987.1 47246 R 1355100 CDS YP_008724988.1 556555171 17433902 complement(51211..51396) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraD 51396 17433902 P423_25560 Escherichia coli JJ1886 conjugal transfer protein TraD YP_008724988.1 51211 R 1355100 CDS YP_008724989.1 556555102 17433903 complement(51412..53439) 1 NC_022650.1 decatenates replicating daughter chromosomes; Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA topoisomerase III 53439 17433903 P423_25565 Escherichia coli JJ1886 DNA topoisomerase III YP_008724989.1 51412 R 1355100 CDS YP_008724990.1 556555172 17433904 complement(53436..53762) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 53762 17433904 P423_25570 Escherichia coli JJ1886 hypothetical protein YP_008724990.1 53436 R 1355100 CDS YP_008724991.1 556555173 17433905 complement(53759..54088) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 54088 17433905 P423_25575 Escherichia coli JJ1886 hypothetical protein YP_008724991.1 53759 R 1355100 CDS YP_008724992.1 556555174 17433906 complement(54108..54641) 1 NC_022650.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraF 54641 17433906 P423_25580 Escherichia coli JJ1886 conjugal transfer protein TraF YP_008724992.1 54108 R 1355100 CDS YP_008724993.1 556555180 17434036 complement(31..1602) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 1602 17434036 P423_25585 Escherichia coli JJ1886 transposase IS66 YP_008724993.1 31 R 1355100 CDS YP_008724994.1 556555181 17433909 complement(1675..2025) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 2025 17433909 P423_25590 Escherichia coli JJ1886 isocitrate lyase YP_008724994.1 1675 R 1355100 CDS YP_008724995.1 556555202 17433910 complement(2022..2447) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 2447 17433910 P423_25595 Escherichia coli JJ1886 transposase YP_008724995.1 2022 R 1355100 CDS YP_008724996.1 556555203 17433911 2539..3660 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 3660 17433911 P423_25600 Escherichia coli JJ1886 hypothetical protein YP_008724996.1 2539 D 1355100 CDS YP_008724997.1 556555204 17433912 complement(3694..4206) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 4206 17433912 P423_25605 Escherichia coli JJ1886 hypothetical protein YP_008724997.1 3694 R 1355100 CDS YP_008724998.1 556555205 17433913 4752..4970 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; pirin 4970 17433913 P423_25610 Escherichia coli JJ1886 pirin YP_008724998.1 4752 D 1355100 CDS YP_008724999.1 556555206 17433914 4972..5277 1 NC_022651.1 controlled cell death protein; post-segregation toxin; toxin addiction system; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; pirin 5277 17433914 P423_25615 Escherichia coli JJ1886 pirin YP_008724999.1 4972 D 1355100 CDS YP_008725000.1 556555207 17433915 5278..6084 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; resolvase 6084 17433915 P423_25620 Escherichia coli JJ1886 resolvase YP_008725000.1 5278 D 1355100 CDS YP_008725001.1 556555208 17433916 6858..7613 1 NC_022651.1 RepE; RepFIB; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; replication protein 7613 17433916 P423_25625 Escherichia coli JJ1886 replication protein YP_008725001.1 6858 D 1355100 CDS YP_008725002.1 556555182 17433917 8201..9367 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosome partitioning protein ParA 9367 17433917 P423_25630 Escherichia coli JJ1886 chromosome partitioning protein ParA YP_008725002.1 8201 D 1355100 CDS YP_008725003.1 556555183 17433918 9367..10338 1 NC_022651.1 SopB; Derived by automated computational analysis using gene prediction method: Protein Homology.; chromosome partitioning protein ParB 10338 17433918 P423_25635 Escherichia coli JJ1886 chromosome partitioning protein ParB YP_008725003.1 9367 D 1355100 CDS YP_008725004.1 556555209 17433919 12491..13174 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; methylase 13174 17433919 P423_25640 Escherichia coli JJ1886 methylase YP_008725004.1 12491 D 1355100 CDS YP_008725005.1 556555210 17433920 13175..13396 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 13396 17433920 P423_25645 Escherichia coli JJ1886 hypothetical protein YP_008725005.1 13175 D 1355100 CDS YP_008725006.1 556555211 17433921 13410..13844 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 13844 17433921 P423_25650 Escherichia coli JJ1886 hypothetical protein YP_008725006.1 13410 D 1355100 CDS YP_008725007.1 556555212 17433922 13844..14671 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 14671 17433922 P423_25655 Escherichia coli JJ1886 hypothetical protein YP_008725007.1 13844 D 1355100 CDS YP_008725008.1 556555213 17433923 15088..15513 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 15513 17433923 P423_25660 Escherichia coli JJ1886 hypothetical protein YP_008725008.1 15088 D 1355100 CDS YP_008725009.1 556555214 17433924 15560..15982 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 15982 17433924 P423_25665 Escherichia coli JJ1886 hypothetical protein YP_008725009.1 15560 D 1355100 CDS YP_008725010.1 556555215 17433925 15979..16170 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 16170 17433925 P423_25670 Escherichia coli JJ1886 hypothetical protein YP_008725010.1 15979 D 1355100 CDS YP_008725011.1 556555216 17433926 complement(17030..17185) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 17185 17433926 P423_25675 Escherichia coli JJ1886 hypothetical protein YP_008725011.1 17030 R 1355100 CDS YP_008725012.1 556555217 17433927 17481..18842 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hydrolase 18842 17433927 P423_25680 Escherichia coli JJ1886 hydrolase YP_008725012.1 17481 D 1355100 CDS YP_008725013.1 556555184 17434035 20316..20843 1 NC_022651.1 binds to single stranded DNA and PriA helcase facilitate replication restart; Derived by automated computational analysis using gene prediction method: Protein Homology.; single-stranded DNA-binding protein 20843 17434035 P423_25685 Escherichia coli JJ1886 single-stranded DNA-binding protein YP_008725013.1 20316 D 1355100 CDS YP_008725014.1 556555218 17433929 20899..21132 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 21132 17433929 P423_25690 Escherichia coli JJ1886 hypothetical protein YP_008725014.1 20899 D 1355100 CDS YP_008725015.1 556555219 17433930 21191..23149 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 23149 17433930 P423_25695 Escherichia coli JJ1886 hypothetical protein YP_008725015.1 21191 D 1355100 CDS YP_008725016.1 556555220 17433931 23204..23638 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; recombinase 23638 psiB 17433931 psiB Escherichia coli JJ1886 recombinase YP_008725016.1 23204 D 1355100 CDS YP_008725017.1 556555221 17433932 23635..24354 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 24354 17433932 P423_25705 Escherichia coli JJ1886 hypothetical protein YP_008725017.1 23635 D 1355100 CDS YP_008725018.1 556555185 17433933 24634..24792 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 24792 17433933 P423_25710 Escherichia coli JJ1886 hypothetical protein YP_008725018.1 24634 D 1355100 CDS YP_008725019.1 556555222 17433934 25143..25847 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 25847 17433934 P423_25715 Escherichia coli JJ1886 transposase YP_008725019.1 25143 D 1355100 CDS YP_008725020.1 556555223 17433935 25942..27795 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase Tn3 27795 17433935 P423_25720 Escherichia coli JJ1886 transposase Tn3 YP_008725020.1 25942 D 1355100 CDS YP_008725021.1 556555224 17433936 27894..28547 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 28547 17433936 P423_25725 Escherichia coli JJ1886 hypothetical protein YP_008725021.1 27894 D 1355100 CDS YP_008725022.1 556555186 17433937 28640..28897 1 NC_022651.1 part of the MazF-MazE toxin-antitoxin system; conteracts MazF; Derived by automated computational analysis using gene prediction method: Protein Homology.; antitoxin MazE 28897 17433937 P423_25730 Escherichia coli JJ1886 antitoxin MazE YP_008725022.1 28640 D 1355100 CDS YP_008725023.1 556555187 17433938 28866..29231 1 NC_022651.1 toxin of the ChpB-ChpS toxin-antitoxin system; Derived by automated computational analysis using gene prediction method: Protein Homology.; toxin B 29231 17433938 P423_25735 Escherichia coli JJ1886 toxin B YP_008725023.1 28866 D 1355100 CDS YP_008725024.1 556555225 17433939 complement(29368..31080) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transporter 31080 17433939 P423_25740 Escherichia coli JJ1886 transporter YP_008725024.1 29368 R 1355100 CDS YP_008725025.1 556555226 17433940 31250..31954 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 31954 17433940 P423_25745 Escherichia coli JJ1886 transposase YP_008725025.1 31250 D 1355100 CDS YP_008725026.1 556555227 17433941 complement(32586..33461) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta-lactamase 33461 17433941 P423_25750 Escherichia coli JJ1886 beta-lactamase YP_008725026.1 32586 R 1355100 CDS YP_008725027.1 556555228 17433942 complement(33547..34239) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; aminoglycoside 6-adenylyltransferase 34239 17433942 P423_25755 Escherichia coli JJ1886 aminoglycoside 6-adenylyltransferase YP_008725027.1 33547 R 1355100 CDS YP_008725028.1 556555229 17433943 complement(34245..34949) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 34949 17433943 P423_25760 Escherichia coli JJ1886 transposase YP_008725028.1 34245 R 1355100 CDS YP_008725029.1 556555188 17433944 35219..35776 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; DNA invertase 35776 17433944 P423_25765 Escherichia coli JJ1886 DNA invertase YP_008725029.1 35219 D 1355100 CDS YP_008725030.1 556555230 17433945 35959..36819 1 NC_022651.1 hydrolyzes the beta-lactam bond in antibiotics such as the penicillins and cephalosporins; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; beta-lactamase 36819 17433945 P423_25770 Escherichia coli JJ1886 beta-lactamase YP_008725030.1 35959 D 1355100 CDS YP_008725031.1 556555231 17433946 complement(37845..38702) 1 NC_022651.1 RepA; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; replication protein 38702 17433946 P423_25775 Escherichia coli JJ1886 replication protein YP_008725031.1 37845 R 1355100 CDS YP_008725032.1 556555232 17433947 complement(38994..39254) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; replication protein 39254 17433947 P423_25780 Escherichia coli JJ1886 replication protein YP_008725032.1 38994 R 1355100 CDS YP_008725033.1 556555233 17433948 complement(39494..40084) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 40084 17433948 P423_25785 Escherichia coli JJ1886 hypothetical protein YP_008725033.1 39494 R 1355100 CDS YP_008725034.1 556555189 17433949 complement(40122..40331) 1 NC_022651.1 with Hns involved in transcriptional regulation of hemolysin; non-specific DNA-binding protein which affects the production of multiple proteins; Derived by automated computational analysis using gene prediction method: Protein Homology.; gene expression modulator 40331 17433949 P423_25790 Escherichia coli JJ1886 gene expression modulator YP_008725034.1 40122 R 1355100 CDS YP_008725035.1 556555234 17433950 complement(40377..40838) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 40838 17433950 P423_25795 Escherichia coli JJ1886 hypothetical protein YP_008725035.1 40377 R 1355100 CDS YP_008725036.1 556555235 17433951 complement(41037..41279) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 41279 17433951 P423_25800 Escherichia coli JJ1886 hypothetical protein YP_008725036.1 41037 R 1355100 CDS YP_008725037.1 556555236 17433952 complement(41424..41984) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein FinO 41984 17433952 P423_25805 Escherichia coli JJ1886 conjugal transfer protein FinO YP_008725037.1 41424 R 1355100 CDS YP_008725038.1 556555237 17433953 complement(42087..42947) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 42947 17433953 P423_25810 Escherichia coli JJ1886 hypothetical protein YP_008725038.1 42087 R 1355100 CDS YP_008725039.1 556555238 17433954 complement(43006..43752) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraX 43752 17433954 P423_25815 Escherichia coli JJ1886 conjugal transfer protein TraX YP_008725039.1 43006 R 1355100 CDS YP_008725040.1 556555239 17433955 complement(43772..47830) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraI 47830 17433955 P423_25820 Escherichia coli JJ1886 conjugal transfer protein TraI YP_008725040.1 43772 R 1355100 CDS YP_008725041.1 556555240 17433956 complement(47894..48598) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 48598 17433956 P423_25825 Escherichia coli JJ1886 transposase YP_008725041.1 47894 R 1355100 CDS YP_008725042.1 556555241 17433957 complement(48635..49471) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraH 49471 17433957 P423_25830 Escherichia coli JJ1886 conjugal transfer protein TraH YP_008725042.1 48635 R 1355100 CDS YP_008725043.1 556555242 17433958 complement(49458..49850) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbF 49850 17433958 P423_25835 Escherichia coli JJ1886 conjugal transfer protein TrbF YP_008725043.1 49458 R 1355100 CDS YP_008725044.1 556555243 17433959 complement(49831..50112) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbJ 50112 17433959 P423_25840 Escherichia coli JJ1886 conjugal transfer protein TrbJ YP_008725044.1 49831 R 1355100 CDS YP_008725045.1 556555244 17433960 complement(50102..50647) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbB 50647 17433960 P423_25845 Escherichia coli JJ1886 conjugal transfer protein TrbB YP_008725045.1 50102 R 1355100 CDS YP_008725046.1 556555245 17433961 complement(50634..50918) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraQ 50918 17433961 P423_25850 Escherichia coli JJ1886 conjugal transfer protein TraQ YP_008725046.1 50634 R 1355100 CDS YP_008725047.1 556555246 17433962 complement(51045..51383) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbA 51383 17433962 P423_25855 Escherichia coli JJ1886 conjugal transfer protein TrbA YP_008725047.1 51045 R 1355100 CDS YP_008725048.1 556555247 17433963 complement(51399..52142) 1 NC_022651.1 type IV secretion system pilus assembly protein; similar to F plasmid TraF; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraF 52142 17433963 P423_25860 Escherichia coli JJ1886 conjugal transfer protein TraF YP_008725048.1 51399 R 1355100 CDS YP_008725049.1 556555248 17433964 complement(52135..52392) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbE 52392 17433964 P423_25865 Escherichia coli JJ1886 conjugal transfer protein TrbE YP_008725049.1 52135 R 1355100 CDS YP_008725050.1 556555249 17433965 complement(52419..54227) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraN 54227 17433965 P423_25870 Escherichia coli JJ1886 conjugal transfer protein TraN YP_008725050.1 52419 R 1355100 CDS YP_008725051.1 556555250 17433966 complement(54224..54862) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbC 54862 17433966 P423_25875 Escherichia coli JJ1886 conjugal transfer protein TrbC YP_008725051.1 54224 R 1355100 CDS YP_008725052.1 556555251 17433967 complement(54871..55176) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 55176 17433967 P423_25880 Escherichia coli JJ1886 hypothetical protein YP_008725052.1 54871 R 1355100 CDS YP_008725053.1 556555252 17433968 complement(55206..56198) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraU 56198 17433968 P423_25885 Escherichia coli JJ1886 conjugal transfer protein TraU YP_008725053.1 55206 R 1355100 CDS YP_008725054.1 556555253 17433969 complement(56195..56827) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraW 56827 17433969 P423_25890 Escherichia coli JJ1886 conjugal transfer protein TraW YP_008725054.1 56195 R 1355100 CDS YP_008725055.1 556555254 17433970 complement(56824..57210) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbI 57210 17433970 P423_25895 Escherichia coli JJ1886 conjugal transfer protein TrbI YP_008725055.1 56824 R 1355100 CDS YP_008725056.1 556555255 17433971 complement(57207..59834) 1 NC_022651.1 similar to VirB4; Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraC 59834 17433971 P423_25900 Escherichia coli JJ1886 conjugal transfer protein TraC YP_008725056.1 57207 R 1355100 CDS YP_008725057.1 556555256 17433972 complement(59897..60001) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 60001 17433972 P423_25905 Escherichia coli JJ1886 hypothetical protein YP_008725057.1 59897 R 1355100 CDS YP_008725058.1 556555190 17433973 complement(59994..60215) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 60215 17433973 P423_25910 Escherichia coli JJ1886 hypothetical protein YP_008725058.1 59994 R 1355100 CDS YP_008725059.1 556555257 17433974 complement(60350..60865) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraV 60865 17433974 P423_25915 Escherichia coli JJ1886 conjugal transfer protein TraV YP_008725059.1 60350 R 1355100 CDS YP_008725060.1 556555258 17433975 complement(60862..61113) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbG 61113 17433975 P423_25920 Escherichia coli JJ1886 conjugal transfer protein TrbG YP_008725060.1 60862 R 1355100 CDS YP_008725061.1 556555259 17433976 complement(61106..61426) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TrbD 61426 17433976 P423_25925 Escherichia coli JJ1886 conjugal transfer protein TrbD YP_008725061.1 61106 R 1355100 CDS YP_008725062.1 556555260 17433977 complement(61413..61997) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraP 61997 17433977 P423_25930 Escherichia coli JJ1886 conjugal transfer protein TraP YP_008725062.1 61413 R 1355100 CDS YP_008725063.1 556555261 17433978 complement(61987..63414) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraB 63414 17433978 P423_25935 Escherichia coli JJ1886 conjugal transfer protein TraB YP_008725063.1 61987 R 1355100 CDS YP_008725064.1 556555262 17433979 complement(63414..64142) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraK 64142 17433979 P423_25940 Escherichia coli JJ1886 conjugal transfer protein TraK YP_008725064.1 63414 R 1355100 CDS YP_008725065.1 556555263 17433980 complement(64129..64695) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraE 64695 17433980 P423_25945 Escherichia coli JJ1886 conjugal transfer protein TraE YP_008725065.1 64129 R 1355100 CDS YP_008725066.1 556555264 17433981 complement(64717..65028) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraL 65028 17433981 P423_25950 Escherichia coli JJ1886 conjugal transfer protein TraL YP_008725066.1 64717 R 1355100 CDS YP_008725067.1 556555265 17433982 complement(65033..65395) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraA 65395 17433982 P423_25955 Escherichia coli JJ1886 conjugal transfer protein TraA YP_008725067.1 65033 R 1355100 CDS YP_008725068.1 556555266 17433983 complement(65429..65656) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraY 65656 17433983 P423_25960 Escherichia coli JJ1886 conjugal transfer protein TraY YP_008725068.1 65429 R 1355100 CDS YP_008725069.1 556555267 17433984 complement(65750..66436) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraJ 66436 17433984 P423_25965 Escherichia coli JJ1886 conjugal transfer protein TraJ YP_008725069.1 65750 R 1355100 CDS YP_008725070.1 556555268 17433985 complement(66630..67013) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; conjugal transfer protein TraM 67013 17433985 P423_25970 Escherichia coli JJ1886 conjugal transfer protein TraM YP_008725070.1 66630 R 1355100 CDS YP_008725071.1 556555191 17433986 67299..67946 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; lytic transglycosylase 67946 17433986 P423_25975 Escherichia coli JJ1886 lytic transglycosylase YP_008725071.1 67299 D 1355100 CDS YP_008725072.1 556555192 17433987 complement(68243..69064) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; hypothetical protein 69064 17433987 P423_25980 Escherichia coli JJ1886 hypothetical protein YP_008725072.1 68243 R 1355100 CDS YP_008725073.1 556555269 17433988 complement(69185..69472) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 69472 17433988 P423_25985 Escherichia coli JJ1886 hypothetical protein YP_008725073.1 69185 R 1355100 CDS YP_008725074.1 556555270 17433989 complement(70164..70868) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 70868 17433989 P423_25990 Escherichia coli JJ1886 transposase YP_008725074.1 70164 R 1355100 CDS YP_008725075.1 556555271 17433990 71148..71909 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; NADH:quinone oxidoreductase 71909 17433990 P423_25995 Escherichia coli JJ1886 NADH:quinone oxidoreductase YP_008725075.1 71148 D 1355100 CDS YP_008725076.1 556555272 17433991 72202..74142 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron permease 74142 17433991 P423_26000 Escherichia coli JJ1886 iron permease YP_008725076.1 72202 D 1355100 CDS YP_008725077.1 556555273 17433992 74183..74710 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; iron transporter 74710 17433992 P423_26005 Escherichia coli JJ1886 iron transporter YP_008725077.1 74183 D 1355100 CDS YP_008725078.1 556555274 17433993 74814..76193 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; membrane protein 76193 17433993 P423_26010 Escherichia coli JJ1886 membrane protein YP_008725078.1 74814 D 1355100 CDS YP_008725079.1 556555275 17433994 76196..77479 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter permease 77479 17433994 P423_26015 Escherichia coli JJ1886 ABC transporter permease YP_008725079.1 76196 D 1355100 CDS YP_008725080.1 556555276 17433995 77469..78599 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter permease 78599 17433995 P423_26020 Escherichia coli JJ1886 ABC transporter permease YP_008725080.1 77469 D 1355100 CDS YP_008725081.1 556555193 17433996 78604..79299 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; phosphonate ABC transporter ATP-binding protein 79299 17433996 P423_26025 Escherichia coli JJ1886 phosphonate ABC transporter ATP-binding protein YP_008725081.1 78604 D 1355100 CDS YP_008725082.1 556555277 17433997 79286..79771 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; thioredoxin 79771 17433997 P423_26030 Escherichia coli JJ1886 thioredoxin YP_008725082.1 79286 D 1355100 CDS YP_008725083.1 556555278 17433998 79796..80281 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 80281 17433998 P423_26035 Escherichia coli JJ1886 hypothetical protein YP_008725083.1 79796 D 1355100 CDS YP_008725084.1 556555194 17433999 80403..80957 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; glucose-1-phosphatase/inositol phosphatase 80957 17433999 P423_26040 Escherichia coli JJ1886 glucose-1-phosphatase/inositol phosphatase YP_008725084.1 80403 D 1355100 CDS YP_008725085.1 556555279 17434000 complement(80991..81695) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 81695 17434000 P423_26045 Escherichia coli JJ1886 transposase YP_008725085.1 80991 R 1355100 CDS YP_008725086.1 556555195 17434001 81672..82028 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase 82028 17434001 P423_26050 Escherichia coli JJ1886 transposase YP_008725086.1 81672 D 1355100 CDS YP_008725087.1 556555280 17434002 82998..83171 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 83171 17434002 P423_26055 Escherichia coli JJ1886 transposase YP_008725087.1 82998 D 1355100 CDS YP_008725088.1 556555281 17434003 83263..83556 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 83556 17434003 P423_26060 Escherichia coli JJ1886 hypothetical protein YP_008725088.1 83263 D 1355100 CDS YP_008725089.1 556555282 17434004 complement(83615..84925) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter substrate-binding protein 84925 17434004 P423_26065 Escherichia coli JJ1886 ABC transporter substrate-binding protein YP_008725089.1 83615 R 1355100 CDS YP_008725090.1 556555196 17434005 complement(84918..85991) 1 NC_022651.1 part of the UgpABCE glycerol-3-phosphate uptake system; Derived by automated computational analysis using gene prediction method: Protein Homology.; glycerol-3-phosphate ABC transporter ATP-binding protein 85991 ugpC 17434005 ugpC Escherichia coli JJ1886 glycerol-3-phosphate ABC transporter ATP-binding protein YP_008725090.1 84918 R 1355100 CDS YP_008725091.1 556555283 17434006 complement(85997..86821) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; 3',5'-cyclic-nucleotide phosphodiesterase 86821 17434006 P423_26075 Escherichia coli JJ1886 3',5'-cyclic-nucleotide phosphodiesterase YP_008725091.1 85997 R 1355100 CDS YP_008725092.1 556555284 17434007 complement(86832..87719) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ABC transporter permease 87719 17434007 P423_26080 Escherichia coli JJ1886 ABC transporter permease YP_008725092.1 86832 R 1355100 CDS YP_008725093.1 556555285 17434008 complement(87709..88587) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; sugar ABC transporter permease 88587 17434008 P423_26085 Escherichia coli JJ1886 sugar ABC transporter permease YP_008725093.1 87709 R 1355100 CDS YP_008725094.1 556555286 17434009 complement(88718..88945) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 88945 17434009 P423_26090 Escherichia coli JJ1886 hypothetical protein YP_008725094.1 88718 R 1355100 CDS YP_008725095.1 556555287 17434010 complement(88976..89158) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 89158 17434010 P423_26095 Escherichia coli JJ1886 hypothetical protein YP_008725095.1 88976 R 1355100 CDS YP_008725096.1 556555288 17434011 89132..89326 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 89326 17434011 P423_26100 Escherichia coli JJ1886 hypothetical protein YP_008725096.1 89132 D 1355100 CDS YP_008725097.1 556555289 17434012 89559..90449 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; dihydrodipicolinate synthase 90449 17434012 P423_26105 Escherichia coli JJ1886 dihydrodipicolinate synthase YP_008725097.1 89559 D 1355100 CDS YP_008725098.1 556555290 17434013 90474..90854 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; endoribonuclease 90854 17434013 P423_26110 Escherichia coli JJ1886 endoribonuclease YP_008725098.1 90474 D 1355100 CDS YP_008725099.1 556555197 17434014 90887..91852 1 NC_022651.1 transports degraded pectin products into the bacterial cell; Derived by automated computational analysis using gene prediction method: Protein Homology.; 2-keto-3-deoxygluconate permease 91852 17434014 P423_26115 Escherichia coli JJ1886 2-keto-3-deoxygluconate permease YP_008725099.1 90887 D 1355100 CDS YP_008725100.1 556555198 17434015 complement(91898..92650) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; IclR family transcriptional regulator 92650 17434015 P423_26120 Escherichia coli JJ1886 IclR family transcriptional regulator YP_008725100.1 91898 R 1355100 CDS YP_008725101.1 556555291 17434016 93261..93539 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; CopG family transcripitonal regulator 93539 17434016 P423_26125 Escherichia coli JJ1886 CopG family transcripitonal regulator YP_008725101.1 93261 D 1355100 CDS YP_008725102.1 556555292 17434017 93539..93814 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; plasmid stabilization protein 93814 17434017 P423_26130 Escherichia coli JJ1886 plasmid stabilization protein YP_008725102.1 93539 D 1355100 CDS YP_008725103.1 556555293 17434018 93920..94213 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 94213 17434018 P423_26135 Escherichia coli JJ1886 hypothetical protein YP_008725103.1 93920 D 1355100 CDS YP_008725104.1 556555294 17434019 complement(94409..95578) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 95578 17434019 P423_26140 Escherichia coli JJ1886 hypothetical protein YP_008725104.1 94409 R 1355100 CDS YP_008725105.1 556555199 17434020 96861..97364 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; insB 97364 17434020 P423_26145 Escherichia coli JJ1886 insB YP_008725105.1 96861 D 1355100 CDS YP_008725106.1 556555295 17434021 97398..97562 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 97562 17434021 P423_26150 Escherichia coli JJ1886 hypothetical protein YP_008725106.1 97398 D 1355100 CDS YP_008725107.1 556555296 17434022 complement(97618..98640) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; helicase UvrD 98640 17434022 P423_26155 Escherichia coli JJ1886 helicase UvrD YP_008725107.1 97618 R 1355100 CDS YP_008725108.1 556555297 17434023 complement(98625..100196) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; ATP-dependent endonuclease 100196 17434023 P423_26160 Escherichia coli JJ1886 ATP-dependent endonuclease YP_008725108.1 98625 R 1355100 CDS YP_008725109.1 556555298 17434024 complement(100271..100687) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; twitching motility protein PilT 100687 17434024 P423_26165 Escherichia coli JJ1886 twitching motility protein PilT YP_008725109.1 100271 R 1355100 CDS YP_008725110.1 556555299 17434025 complement(100684..101082) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; AbrB family transcriptional regulator 101082 17434025 P423_26170 Escherichia coli JJ1886 AbrB family transcriptional regulator YP_008725110.1 100684 R 1355100 CDS YP_008725111.1 556555300 17434026 101083..101241 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 101241 17434026 P423_26175 Escherichia coli JJ1886 hypothetical protein YP_008725111.1 101083 D 1355100 CDS YP_008725112.1 556555301 17434027 101295..105089 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 105089 17434027 P423_26180 Escherichia coli JJ1886 hypothetical protein YP_008725112.1 101295 D 1355100 CDS YP_008725113.1 556555302 17434028 complement(105134..105550) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; twitching motility protein PilT 105550 17434028 P423_26185 Escherichia coli JJ1886 twitching motility protein PilT YP_008725113.1 105134 R 1355100 CDS YP_008725114.1 556555303 17434029 complement(105547..105777) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; virulence factor 105777 17434029 P423_26190 Escherichia coli JJ1886 virulence factor YP_008725114.1 105547 R 1355100 CDS YP_008725115.1 556555304 17434030 106042..106542 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 106542 17434030 P423_26195 Escherichia coli JJ1886 hypothetical protein YP_008725115.1 106042 D 1355100 CDS YP_008725116.1 556555305 17434031 106555..107328 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 107328 17434031 P423_26200 Escherichia coli JJ1886 hypothetical protein YP_008725116.1 106555 D 1355100 CDS YP_008725117.1 556555200 17434032 complement(107539..109110) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; transposase IS66 109110 17434032 P423_26205 Escherichia coli JJ1886 transposase IS66 YP_008725117.1 107539 R 1355100 CDS YP_008725118.1 556555201 17434033 complement(109183..109533) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: Protein Homology.; isocitrate lyase 109533 17434033 P423_26210 Escherichia coli JJ1886 isocitrate lyase YP_008725118.1 109183 R 1355100 CDS YP_008725119.1 556555306 17434034 complement(109530..109955) 1 NC_022651.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; transposase 109955 17434034 P423_26215 Escherichia coli JJ1886 transposase YP_008725119.1 109530 R 1355100 CDS YP_008747581.1 556579582 17457126 484..960 1 NC_022661.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; RepA plasmid replication protein 960 17457126 P423_25130 Escherichia coli JJ1886 RepA plasmid replication protein YP_008747581.1 484 D 1355100 CDS YP_008747582.1 556579592 17457133 complement(732..1607) 1 NC_022662.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 1607 17457133 P423_25170 Escherichia coli JJ1886 hypothetical protein YP_008747582.1 732 R 1355100 CDS YP_008747583.1 556579593 17457128 complement(1600..2652) 1 NC_022662.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2652 17457128 P423_25175 Escherichia coli JJ1886 hypothetical protein YP_008747583.1 1600 R 1355100 CDS YP_008747584.1 556579594 17457129 complement(2871..2984) 1 NC_022662.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; hypothetical protein 2984 17457129 P423_25180 Escherichia coli JJ1886 hypothetical protein YP_008747584.1 2871 R 1355100 CDS YP_008747585.1 556579595 17457130 complement(3026..4591) 1 NC_022662.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; DNA polymerase 4591 17457130 P423_25185 Escherichia coli JJ1886 DNA polymerase YP_008747585.1 3026 R 1355100 CDS YP_008747586.1 556579596 17457131 complement(4581..4937) 1 NC_022662.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; mobilization protein 4937 17457131 P423_25190 Escherichia coli JJ1886 mobilization protein YP_008747586.1 4581 R 1355100 CDS YP_008747587.1 556579597 17457132 4969..5160 1 NC_022662.1 Derived by automated computational analysis using gene prediction method: GeneMarkS+.; regulatory protein 5160 17457132 P423_25195 Escherichia coli JJ1886 regulatory protein YP_008747587.1 4969 D 1355100 CDS